BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001780
(1014 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|186532719|ref|NP_201201.2| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
gi|322510022|sp|Q9LVN7.2|DPOD1_ARATH RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=Protein EMBRYO DEFECTIVE 2780
gi|76262800|gb|ABA41487.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
thaliana]
gi|332010438|gb|AED97821.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
Length = 1095
Score = 1623 bits (4204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 818/1099 (74%), Positives = 903/1099 (82%), Gaps = 89/1099 (8%)
Query: 1 MNRSNGSARKRPPPTPKESWPNKQQATTPTTP-----VIDDEFL-DEDVFLDETLL--PE 52
MNRS G ++KRPPP+ K +AT +TP +DDEF+ +EDVFLDETLL E
Sbjct: 1 MNRS-GISKKRPPPSNTPPPAGKHRATGDSTPSPAIGTLDDEFMMEEDVFLDETLLYGDE 59
Query: 53 DEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPL 112
DEESLILRDIE+R+ SR + WARPPLS Y+S QSI+FQQL+ID +I +S++ELLP
Sbjct: 60 DEESLILRDIEERE---SRSSAWARPPLSPAYLSNSQSIIFQQLEIDSIIAESHKELLPG 116
Query: 113 SSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANR 172
SSG A IIR+FGVTREG+SVCC VHGFEPYFYI+CP GMGPDDIS+FHQ LEGRMRE+N+
Sbjct: 117 SSGQAPIIRMFGVTREGNSVCCFVHGFEPYFYIACPPGMGPDDISNFHQSLEGRMRESNK 176
Query: 173 NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK 232
N+KVP+FV+ IEMVQKRSIMYYQQQKSQ FLKI VALPTMVASCRGILDRG+Q+DGLGMK
Sbjct: 177 NAKVPKFVKRIEMVQKRSIMYYQQQKSQTFLKITVALPTMVASCRGILDRGLQIDGLGMK 236
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
SF TYESN+LF LRFM+DC+IVGGNWIEVP GKY+K A+TLSYCQLEF CLYSD+IS
Sbjct: 237 SFQTYESNILFVLRFMVDCDIVGGNWIEVPTGKYKKNARTLSYCQLEFHCLYSDLISHAA 296
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQ--------------VANLVTLQG- 337
EGE+SKMAPFR+LSFDIECAGRKGHFPE HDPVIQ V N++TL+
Sbjct: 297 EGEYSKMAPFRVLSFDIECAGRKGHFPEAKHDPVIQIANLVTLQGEDHPFVRNVMTLKSC 356
Query: 338 -------------EKQPFIRNVMTLKSCAP--IVGVDVMSFE----TERDVLLAWRDF-- 376
E++ + ++ P I+G ++ F+ ER L +F
Sbjct: 357 APIVGVDVMSFETEREVLLAWRDLIRDVDPDIIIGYNICKFDLPYLIERAATLGIEEFPL 416
Query: 377 ----------------------IREVDPDVMIG------------------YNICKFDLP 396
IRE + G Y++
Sbjct: 417 LGRVKNSRVRVRDSTFSSRQQGIRESKETTIEGRFQFDLIQAIHRDHKLSSYSLNSVSAH 476
Query: 397 YLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTG 455
+L E KEDVHHSII+DLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFI+NYVEMARVTG
Sbjct: 477 FLSEQKEDVHHSIITDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTG 536
Query: 456 VPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPI 515
VPISFLL+RGQSIKVLSQLLRK KQKNLV+PN KQ+GSEQGTYEGATVLEAR GFYEKPI
Sbjct: 537 VPISFLLARGQSIKVLSQLLRKGKQKNLVLPNAKQSGSEQGTYEGATVLEARTGFYEKPI 596
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPE 575
ATLDFASLYPSIMMAYNLCY TLVTPED RKLNLPPE V KTPSGETFVK LQKGILPE
Sbjct: 597 ATLDFASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPEHVTKTPSGETFVKQTLQKGILPE 656
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
ILEELL ARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPC+EISS
Sbjct: 657 ILEELLTARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISS 716
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SVTSYGRQMIE TKKLVEDKFTT+GGY++NAEVIYGDTDSVMVQFGV VEAAM LGREA
Sbjct: 717 SVTSYGRQMIEQTKKLVEDKFTTLGGYQYNAEVIYGDTDSVMVQFGVSDVEAAMTLGREA 776
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A++ISGTFIKPIKLEFEKVY+PYLLI+KKRYAGL WTNP++FDKMDTKGIETVRRDNCLL
Sbjct: 777 AEHISGTFIKPIKLEFEKVYFPYLLINKKRYAGLLWTNPQQFDKMDTKGIETVRRDNCLL 836
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
VKNLVTE L+KIL+DRD+PGA + VK TISDLLMNR+DLSLLVITKGLTKTGDDYEVK+A
Sbjct: 837 VKNLVTESLNKILIDRDVPGAAENVKKTISDLLMNRIDLSLLVITKGLTKTGDDYEVKSA 896
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
H ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL+NNIPID +YYLE
Sbjct: 897 HGELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLQNNIPIDPNYYLE 956
Query: 876 NQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN 935
NQISKPLLRIFEP+LKNASKELL G HTRSISI+TPSNSGIMKFAK+QLSC+GCK ISN
Sbjct: 957 NQISKPLLRIFEPVLKNASKELLHGSHTRSISITTPSNSGIMKFAKKQLSCVGCKVPISN 1016
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
GTLC+ CKGREAELYCK VSQV ELE +FGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR
Sbjct: 1017 GTLCASCKGREAELYCKNVSQVAELEEVFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 1076
Query: 996 KKAQKDMAEAKLQLDRWNF 1014
KAQKDMA A+ QLDRW+F
Sbjct: 1077 MKAQKDMAVARQQLDRWSF 1095
>gi|297793989|ref|XP_002864879.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
lyrata subsp. lyrata]
gi|297310714|gb|EFH41138.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
lyrata subsp. lyrata]
Length = 1092
Score = 1618 bits (4189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 816/1101 (74%), Positives = 902/1101 (81%), Gaps = 96/1101 (8%)
Query: 1 MNRSNGSARKRPPP--TPKESWPNKQQATTPTTP-----VIDDEFL-DEDVFLDETLL-- 50
MNR+ G+++KRPPP TP K +AT +TP +DDEF+ DEDVFLDE LL
Sbjct: 1 MNRA-GNSKKRPPPSNTPPAV---KHRATGNSTPSPAIGTLDDEFMVDEDVFLDEALLYG 56
Query: 51 PEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL 110
EDEESLILRDIE+R+ SR + WARPPLS Y+S Q +FQQL+ID +I +S++ELL
Sbjct: 57 DEDEESLILRDIEERE---SRSSAWARPPLSPAYLSNSQ--IFQQLEIDSIISESHKELL 111
Query: 111 PLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA 170
P SSG A IIR+FGVTREG+SVCC VHGFEPYFYI+CP GMGPDDIS FHQILEGRMRE+
Sbjct: 112 PGSSGQAPIIRMFGVTREGNSVCCFVHGFEPYFYIACPPGMGPDDISKFHQILEGRMRES 171
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
N+N+KVP+FVR IEMVQKRSIMYYQQQ+SQ FLKI VALPTMVASCRGILDRG+Q+DG G
Sbjct: 172 NKNAKVPKFVRRIEMVQKRSIMYYQQQESQTFLKITVALPTMVASCRGILDRGLQIDGFG 231
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISR 290
MKSF TYESN++F LRFM+DC+IVGGNWIEVP GKY+K A+TLSYCQLEF CLYSD+IS
Sbjct: 232 MKSFQTYESNIIFVLRFMVDCDIVGGNWIEVPTGKYKKNARTLSYCQLEFHCLYSDLISH 291
Query: 291 HPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQ--------------VANLVTLQ 336
EGE+SKMAPFR+LSFDIECAGRKGHFPE HDPVIQ V N++TL+
Sbjct: 292 AAEGEYSKMAPFRVLSFDIECAGRKGHFPEAKHDPVIQIANLVTLQGEDHPFVRNVMTLK 351
Query: 337 G--------------EKQPFIRNVMTLKSCAP--IVGVDVMSFE----TERDVLLAWRDF 376
E++ + ++ P I+G ++ F+ ER L +F
Sbjct: 352 SCAPIVGVDVMSFETEREVLLAWRDLIRDVDPDIIIGYNICKFDLPYLIERAATLGIEEF 411
Query: 377 ------------------------IREVDPDVMIG------------------YNICKFD 394
IRE + G Y++
Sbjct: 412 PLLGRVKNSRVRVRDSTFSSRQQGIRESKETTIEGRFQFDLIQAIHRDHKLSSYSLNSVS 471
Query: 395 LPYLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARV 453
+L E KEDVHHSII+DLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFI+NYVEMARV
Sbjct: 472 AHFLSEQKEDVHHSIITDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARV 531
Query: 454 TGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEK 513
TGVPISFLL+RGQSIKVLSQLLRKAKQKNLV+PN KQ+GSEQGTYEGATVLEAR GFYEK
Sbjct: 532 TGVPISFLLARGQSIKVLSQLLRKAKQKNLVLPNAKQSGSEQGTYEGATVLEARTGFYEK 591
Query: 514 PIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGIL 573
PIATLDFASLYPSIMMAYNLCY TLVTPED RKLNLPPE V +TPSGETFVK +LQKGIL
Sbjct: 592 PIATLDFASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPEHVTRTPSGETFVKQSLQKGIL 651
Query: 574 PEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEI 633
PEILEELL ARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGAT GQLPC+EI
Sbjct: 652 PEILEELLTARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATNGQLPCLEI 711
Query: 634 SSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR 693
SSSVTSYGRQMIE TKKLVEDKFTT+GGYE+NAEVIYGDTDSVMVQFGV VEAAM LGR
Sbjct: 712 SSSVTSYGRQMIEQTKKLVEDKFTTLGGYEYNAEVIYGDTDSVMVQFGVSDVEAAMNLGR 771
Query: 694 EAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNC 753
EAA++ISGTFIKPIKLEFEKVY+PYLLI+KKRYAGL WTNP++FDKMDTKGIETVRRDNC
Sbjct: 772 EAAEHISGTFIKPIKLEFEKVYFPYLLINKKRYAGLLWTNPQQFDKMDTKGIETVRRDNC 831
Query: 754 LLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVK 813
LLVKNLVTE L+KIL+DRD+PGA + VK TISDLLMNR+DLSLLVITKGLTKTGDDYEVK
Sbjct: 832 LLVKNLVTESLNKILIDRDVPGAAENVKKTISDLLMNRIDLSLLVITKGLTKTGDDYEVK 891
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
+AH ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL+NNIPID +YY
Sbjct: 892 SAHGELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLQNNIPIDPNYY 951
Query: 874 LENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI 933
LENQISKPLLRIFEP+LKNASKELL G HTRSISI+TPSNSGIMKFAK+QLSC+GCK I
Sbjct: 952 LENQISKPLLRIFEPVLKNASKELLHGSHTRSISITTPSNSGIMKFAKKQLSCVGCKVPI 1011
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
SNGTLC+ CKGREAELYCK VSQV ELE +FGRLWTQCQECQGSLHQDVLCTSRDCPIFY
Sbjct: 1012 SNGTLCASCKGREAELYCKNVSQVAELEEVFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 1071
Query: 994 RRKKAQKDMAEAKLQLDRWNF 1014
RR KAQKDMA A+ QLDRW+F
Sbjct: 1072 RRMKAQKDMAVARQQLDRWSF 1092
>gi|255549385|ref|XP_002515746.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
gi|223545183|gb|EEF46693.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
Length = 1049
Score = 1546 bits (4004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 792/1062 (74%), Positives = 867/1062 (81%), Gaps = 61/1062 (5%)
Query: 1 MNRSNGSARKRPPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILR 60
MNRS + ++ P TP+ K +ATTP+T V D+EF+DEDVFLDETL+ EDEE+LILR
Sbjct: 1 MNRSANTRKRPPAATPQPPPAAKHKATTPSTTV-DEEFVDEDVFLDETLIAEDEENLILR 59
Query: 61 DIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAII 120
D+E+ + ASRL++WARPPLS Y+SQ QSI+FQQL+IDYVIG+SNRELLP SG AAII
Sbjct: 60 DLEKHEALASRLSRWARPPLSHAYLSQSQSIIFQQLEIDYVIGESNRELLPDRSGPAAII 119
Query: 121 RIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFV 180
RIFGVTREGHSVCC VHGFEPYFYISCP GMGPDDIS F QILEGRMRE NR+SKVP+F+
Sbjct: 120 RIFGVTREGHSVCCNVHGFEPYFYISCPSGMGPDDISSFQQILEGRMREVNRSSKVPKFI 179
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
R IE+VQKRSIMYYQQQ+S PFLKIVVALPT+VASCRGILD+GI +DGLGMKSFMTYESN
Sbjct: 180 RRIEVVQKRSIMYYQQQESHPFLKIVVALPTVVASCRGILDKGIHIDGLGMKSFMTYESN 239
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
VLFALRFMIDCN+VGGNWIEV L Q E ++++ + S +
Sbjct: 240 VLFALRFMIDCNVVGGNWIEVA---------NLVTLQGEDKPFIRNVMTLN---SCSPIV 287
Query: 301 PFRILSFDIE---CAGRKGHFPEPTHDPVIQ-----------VANLVTLQGEKQPFIRNV 346
++SFD E + E D +I + TL + P + V
Sbjct: 288 GVDVMSFDTERKVLLAWRDFIREVDPDIIIGYNICKFDLPYLIERAETLGIAEFPVLGRV 347
Query: 347 MTLKSCAPIVGVDVMSFET--ERDVLLAWR---DFIREVDPDVMI-GYNICKFDLPYLIE 400
+ + T ++V L R D ++ + D + Y++ +L E
Sbjct: 348 RNSRVRVKDTTFSSRQYGTRESKEVTLEGRVQFDLLQAMQRDYKLSSYSLNSVSAHFLSE 407
Query: 401 K-EDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+ EDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLM+I+NYVEMARVTGVP+S
Sbjct: 408 QKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMYIYNYVEMARVTGVPMS 467
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG+YEGATVLEA AGFYEKPIATLD
Sbjct: 468 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGSYEGATVLEANAGFYEKPIATLD 527
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMAYNLCY TLVTPED RKLNLPPECVNKTPSGETFVK NLQKGILPEILEE
Sbjct: 528 FASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPECVNKTPSGETFVKPNLQKGILPEILEE 587
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAAR+RAKADLKEAKDPLEKAVLDGRQLALK+SANSVYGFTGATVGQLPC+EISSSVTS
Sbjct: 588 LLAARRRAKADLKEAKDPLEKAVLDGRQLALKVSANSVYGFTGATVGQLPCLEISSSVTS 647
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGRQMIEHTKKLVEDKFT +GGYEHNAEVIYGDTDSVMVQFGVPTV AMKLGREAA+YI
Sbjct: 648 YGRQMIEHTKKLVEDKFTIMGGYEHNAEVIYGDTDSVMVQFGVPTVPEAMKLGREAAEYI 707
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRR--------D 751
SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN +KFDKMDTKG ++ +
Sbjct: 708 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNSDKFDKMDTKGEQSTFQPLTICXXXX 767
Query: 752 NCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE 811
NCLLVKNLVTECLHKIL+DRD+PGAVQYVK+TISDLLMNRMDLSLLVITKGLTKTGDDYE
Sbjct: 768 NCLLVKNLVTECLHKILIDRDVPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYE 827
Query: 812 VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTH 871
VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPID
Sbjct: 828 VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQ 887
Query: 872 YYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCI---- 927
YYLENQISKPLLRIFEPILKNASKELL G HTRSISISTPSN GIMKFAK+QL+
Sbjct: 888 YYLENQISKPLLRIFEPILKNASKELLHGSHTRSISISTPSNGGIMKFAKKQLTYFLQVR 947
Query: 928 -------------GCK--ALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQ 972
C+ AL+ + TLCSHCKGREAELYCKTVSQV ELE+LFGRLWTQCQ
Sbjct: 948 HIERHLICSIKFNSCQYPALLYDRTLCSHCKGREAELYCKTVSQVSELELLFGRLWTQCQ 1007
Query: 973 ECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
ECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAK QLDRWNF
Sbjct: 1008 ECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKRQLDRWNF 1049
>gi|8777309|dbj|BAA96899.1| DNA polymerase III catalytic subunit [Arabidopsis thaliana]
Length = 1081
Score = 1462 bits (3785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 746/1018 (73%), Positives = 827/1018 (81%), Gaps = 91/1018 (8%)
Query: 1 MNRSNGSARKRPPPTPKESWPNKQQATTPTTP-----VIDDEFL-DEDVFLDETLL--PE 52
MNRS G ++KRPPP+ K +AT +TP +DDEF+ +EDVFLDETLL E
Sbjct: 1 MNRS-GISKKRPPPSNTPPPAGKHRATGDSTPSPAIGTLDDEFMMEEDVFLDETLLYGDE 59
Query: 53 DEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPL 112
DEESLILRDIE+R+ SR + WARPPLS Y+S Q +FQQL+ID +I +S++ELLP
Sbjct: 60 DEESLILRDIEERE---SRSSAWARPPLSPAYLSNSQ--IFQQLEIDSIIAESHKELLPG 114
Query: 113 SSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANR 172
SSG A IIR+FGVTREG+SVCC VHGFEPYFYI+CP GMGPDDIS+FHQ LEGRMRE+N+
Sbjct: 115 SSGQAPIIRMFGVTREGNSVCCFVHGFEPYFYIACPPGMGPDDISNFHQSLEGRMRESNK 174
Query: 173 NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK 232
N+KVP+FV+ IEMVQKRSIMYYQQQKSQ FLKI VALPTMVASCRGILDRG+Q+DGLGMK
Sbjct: 175 NAKVPKFVKRIEMVQKRSIMYYQQQKSQTFLKITVALPTMVASCRGILDRGLQIDGLGMK 234
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
SF TYESN+LF LRFM+DC+IVGGNWIEVP GKY+K A+TLSYCQLEF CLYSD+IS
Sbjct: 235 SFQTYESNILFVLRFMVDCDIVGGNWIEVPTGKYKKNARTLSYCQLEFHCLYSDLISHAA 294
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQ--------------VANLVTLQG- 337
EGE+SKMAPFR+LSFDIECAGRKGHFPE HDPVIQ V N++TL+
Sbjct: 295 EGEYSKMAPFRVLSFDIECAGRKGHFPEAKHDPVIQIANLVTLQGEDHPFVRNVMTLKSC 354
Query: 338 -------------EKQPFIRNVMTLKSCAP--IVGVDVMSFE----TERDVLLAWRDF-- 376
E++ + ++ P I+G ++ F+ ER L +F
Sbjct: 355 APIVGVDVMSFETEREVLLAWRDLIRDVDPDIIIGYNICKFDLPYLIERAATLGIEEFPL 414
Query: 377 ----------------------IREVDPDVMIG------------------YNICKFDLP 396
IRE + G Y++
Sbjct: 415 LGRVKNSRVRVRDSTFSSRQQGIRESKETTIEGRFQFDLIQAIHRDHKLSSYSLNSVSAH 474
Query: 397 YLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTG 455
+L E KEDVHHSII+DLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFI+NYVEMARVTG
Sbjct: 475 FLSEQKEDVHHSIITDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTG 534
Query: 456 VPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPI 515
VPISFLL+RGQSIKVLSQLLRK KQKNLV+PN KQ+GSEQGTYEGATVLEAR GFYEKPI
Sbjct: 535 VPISFLLARGQSIKVLSQLLRKGKQKNLVLPNAKQSGSEQGTYEGATVLEARTGFYEKPI 594
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPE 575
ATLDFASLYPSIMMAYNLCY TLVTPED RKLNLPPE V KTPSGETFVK LQKGILPE
Sbjct: 595 ATLDFASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPEHVTKTPSGETFVKQTLQKGILPE 654
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
ILEELL ARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPC+EISS
Sbjct: 655 ILEELLTARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISS 714
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SVTSYGRQMIE TKKLVEDKFTT+GGY++NAEVIYGDTDSVMVQFGV VEAAM LGREA
Sbjct: 715 SVTSYGRQMIEQTKKLVEDKFTTLGGYQYNAEVIYGDTDSVMVQFGVSDVEAAMTLGREA 774
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A++ISGTFIKPIKLEFEKVY+PYLLI+KKRYAGL WTNP++FDKMDTKGIETVRRDNCLL
Sbjct: 775 AEHISGTFIKPIKLEFEKVYFPYLLINKKRYAGLLWTNPQQFDKMDTKGIETVRRDNCLL 834
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
VKNLVTE L+KIL+DRD+PGA + VK TISDLLMNR+DLSLLVITKGLTKTGDDYEVK+A
Sbjct: 835 VKNLVTESLNKILIDRDVPGAAENVKKTISDLLMNRIDLSLLVITKGLTKTGDDYEVKSA 894
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
H ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL+NNIPID +YYLE
Sbjct: 895 HGELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLQNNIPIDPNYYLE 954
Query: 876 NQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI 933
NQISKPLLRIFEP+LKNASKELL G HTRSISI+TPSNSGIMKFAK+QLSC+GCK I
Sbjct: 955 NQISKPLLRIFEPVLKNASKELLHGSHTRSISITTPSNSGIMKFAKKQLSCVGCKVPI 1012
>gi|302801963|ref|XP_002982737.1| hypothetical protein SELMODRAFT_155333 [Selaginella moellendorffii]
gi|300149327|gb|EFJ15982.1| hypothetical protein SELMODRAFT_155333 [Selaginella moellendorffii]
Length = 980
Score = 1410 bits (3650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 697/980 (71%), Positives = 784/980 (80%), Gaps = 75/980 (7%)
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
+P +G AAI+R+FGVT +G+SVCC +HGFEPYFYISCP G PDD S F LE RMRE
Sbjct: 1 MPGRTGPAAILRMFGVTLQGNSVCCHIHGFEPYFYISCPDGWNPDDTSKFRHTLETRMRE 60
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL 229
ANRNSK P FV +EMVQKRS+MY+Q QK++ FLKIVVALPTMVASCRGIL++GI L+G
Sbjct: 61 ANRNSKTPTFVTRVEMVQKRSLMYFQTQKARAFLKIVVALPTMVASCRGILEKGITLEGF 120
Query: 230 GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIIS 289
G K F+TYESN+LFALRFMIDCN+ GGNWIE+P G YR T + LS CQ+E D LY+ I+S
Sbjct: 121 GHKCFITYESNILFALRFMIDCNVGGGNWIELPGGSYRLTPRRLSTCQIEIDILYNKIVS 180
Query: 290 RHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVA--------------NLVTL 335
G++SK+APFRILSFDIECAGRKGHFPEP HDPVIQ+A N++TL
Sbjct: 181 HSATGQYSKLAPFRILSFDIECAGRKGHFPEPEHDPVIQIANLVTVQGESRPMVRNVMTL 240
Query: 336 QGEKQPFIRNVMTL----------KSCAP--IVGVDVMSFETE----------------- 366
+ +VM+ + P I+G ++ F+
Sbjct: 241 KSCSAIVGVDVMSFDTEKEVLLAWRKLTPDIIIGYNICKFDMPYLIERAQKLGIVEFPVL 300
Query: 367 ----------RDVLLAWRDF-IREVDPDVMIG------------------YNICKFDLPY 397
RD + R + IRE ++ G Y++ +
Sbjct: 301 GRIRNSRVRVRDATFSSRQYGIRESKEVLIEGRVQFDLLQAMQRDYKLSSYSLNSVSAHF 360
Query: 398 LIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGV 456
L E KEDVHHSII+DLQNGN+ETRRRLAVYCLKDAYLPQRLL+KLMFI+NY+EMARVTGV
Sbjct: 361 LGEQKEDVHHSIIADLQNGNSETRRRLAVYCLKDAYLPQRLLEKLMFIYNYIEMARVTGV 420
Query: 457 PISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIA 516
PISFLLSRGQSIKVLSQ+LRK +Q+N V+PN+K G+ Q T+EGATVLEARAGFYEKPIA
Sbjct: 421 PISFLLSRGQSIKVLSQILRKCRQRNFVVPNIKGQGAGQETFEGATVLEARAGFYEKPIA 480
Query: 517 TLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEI 576
TLDFASLYPSIMMAYNLCY TLV ED +LN+ PE VNKTPSGETFVK+N++KGILPEI
Sbjct: 481 TLDFASLYPSIMMAYNLCYCTLVRTEDQARLNIAPENVNKTPSGETFVKTNMEKGILPEI 540
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
LEELLAARKRA+ADLKEA D LEKAVLDGRQLALK+SANSVYGFTGATVGQLPC+EISSS
Sbjct: 541 LEELLAARKRARADLKEATDSLEKAVLDGRQLALKVSANSVYGFTGATVGQLPCLEISSS 600
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
VTSYGRQMIEHTK LVE +F T Y++NAEVIYGDTDSVMVQFGV TVE AM LGREAA
Sbjct: 601 VTSYGRQMIEHTKTLVEGRFNTSNKYDNNAEVIYGDTDSVMVQFGVSTVEDAMNLGREAA 660
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
DYISGTF KPIKLEFEKVY+PYLLISKKRYAGL WT P K+DKMDTKGIETVRRDNCLLV
Sbjct: 661 DYISGTFTKPIKLEFEKVYFPYLLISKKRYAGLLWTKPAKYDKMDTKGIETVRRDNCLLV 720
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
KN+VT+ LHKILVDRD+PGAV YVK ISDLLMNRMDLSLLVITKGLTKTGDDY VKAAH
Sbjct: 721 KNVVTQSLHKILVDRDVPGAVDYVKGMISDLLMNRMDLSLLVITKGLTKTGDDYAVKAAH 780
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPID YYLEN
Sbjct: 781 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLEN 840
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG 936
Q+SKPLLRIFEPILKNASKELL G HTRS+ I+TPSNSGIMKFAK+QL+C+GCKA+IS G
Sbjct: 841 QLSKPLLRIFEPILKNASKELLHGSHTRSVYITTPSNSGIMKFAKKQLTCLGCKAIISGG 900
Query: 937 T--LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LC HC GREAELY +TV+ V++LE LFGRLWTQCQ CQGSLHQDVLCTSRDCPIFYR
Sbjct: 901 DTPLCKHCNGREAELYQRTVANVRDLEQLFGRLWTQCQRCQGSLHQDVLCTSRDCPIFYR 960
Query: 995 RKKAQKDMAEAKLQLDRWNF 1014
RKKAQKD++EA+LQ RW+F
Sbjct: 961 RKKAQKDLSEAELQEQRWDF 980
>gi|225431691|ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
gi|296088521|emb|CBI37512.3| unnamed protein product [Vitis vinifera]
Length = 1089
Score = 1200 bits (3104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/617 (94%), Positives = 599/617 (97%), Gaps = 2/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFI+NYVEMARVTGVPIS
Sbjct: 473 QKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPIS 532
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQSIKVLSQLLRKAKQKNLV+PNVKQAGSEQGTYEGATVLEA AGFYEKPIATLD
Sbjct: 533 FLLSRGQSIKVLSQLLRKAKQKNLVLPNVKQAGSEQGTYEGATVLEANAGFYEKPIATLD 592
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMAYNLCY TLVTPED RKLNLPPECVNKTPSGE FVKS+LQKGILPEILEE
Sbjct: 593 FASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPECVNKTPSGEIFVKSSLQKGILPEILEE 652
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS
Sbjct: 653 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 712
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGRQMIEHTKKLVE+KFTT+GGYEHNAEVIYGDTDSVMV FGV TVEAAM LGREAA+YI
Sbjct: 713 YGRQMIEHTKKLVEEKFTTLGGYEHNAEVIYGDTDSVMVLFGVSTVEAAMNLGREAAEYI 772
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
SGTF+KPIKLEFEKVYYPYLLISKKRYAGL WTNP+KFDKMDTKGIETVRRDNCLLVKNL
Sbjct: 773 SGTFMKPIKLEFEKVYYPYLLISKKRYAGLLWTNPDKFDKMDTKGIETVRRDNCLLVKNL 832
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
V ECLHKIL+DRDIPGAVQYVK+TI+DLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL
Sbjct: 833 VKECLHKILIDRDIPGAVQYVKNTIADLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 892
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPID YYLENQIS
Sbjct: 893 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQIS 952
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG--T 937
KPLLRIFEPILKNASKELL G HTRSISISTPSNSGIMKFAK+QLSCIGCKALISN T
Sbjct: 953 KPLLRIFEPILKNASKELLHGSHTRSISISTPSNSGIMKFAKKQLSCIGCKALISNTDRT 1012
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LCSHCKGREAELYCKTV+ V ELE+LFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK
Sbjct: 1013 LCSHCKGREAELYCKTVANVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 1072
Query: 998 AQKDMAEAKLQLDRWNF 1014
AQKDMAEAKLQL+RWNF
Sbjct: 1073 AQKDMAEAKLQLERWNF 1089
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/382 (81%), Positives = 348/382 (91%), Gaps = 5/382 (1%)
Query: 23 KQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSS 82
K QA++ +P+ +++ LDEDVFL+ETL+ EDE ILRDIE R+ ASRL+KWARPPLSS
Sbjct: 24 KHQASS--SPLAEED-LDEDVFLEETLILEDEH--ILRDIEDRRALASRLSKWARPPLSS 78
Query: 83 GYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPY 142
Y+S QSI+FQQL+IDYVIG+S++EL+P SSGSAAIIRIFGVTREGHSVCC VHGFEPY
Sbjct: 79 AYLSSSQSIVFQQLEIDYVIGESHKELMPNSSGSAAIIRIFGVTREGHSVCCNVHGFEPY 138
Query: 143 FYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPF 202
FYISCP GMGPDDIS FHQ+LEGRMRE NRNS+VP+FVR IEMVQKRSIMYYQ Q S PF
Sbjct: 139 FYISCPPGMGPDDISRFHQVLEGRMREVNRNSRVPKFVRRIEMVQKRSIMYYQLQSSHPF 198
Query: 203 LKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP 262
LKIVVALPTMV SCRGILDRGIQ++G GMK+F+TYESNVLFALRFM+DCNIVGGNWIEVP
Sbjct: 199 LKIVVALPTMVTSCRGILDRGIQIEGFGMKNFVTYESNVLFALRFMVDCNIVGGNWIEVP 258
Query: 263 VGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPT 322
GKY+KTAK LSYCQLEFDCLYS++ S PEGEFSKMAPFRILSFDIECAGRKGHFPEPT
Sbjct: 259 AGKYKKTAKNLSYCQLEFDCLYSELTSHIPEGEFSKMAPFRILSFDIECAGRKGHFPEPT 318
Query: 323 HDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDP 382
HDPVIQVANLVTLQGE QPF+RNVMTLKSC+PIVGVDVMSFETER+VLLAWRDFIREVDP
Sbjct: 319 HDPVIQVANLVTLQGEDQPFVRNVMTLKSCSPIVGVDVMSFETEREVLLAWRDFIREVDP 378
Query: 383 DVMIGYNICKFDLPYLIEKEDV 404
D++IGYNICKFDLPYLIE+ V
Sbjct: 379 DIIIGYNICKFDLPYLIERASV 400
>gi|449451191|ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
sativus]
Length = 1086
Score = 1174 bits (3037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/617 (92%), Positives = 592/617 (95%), Gaps = 2/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFI+NYVEMARVTGVPIS
Sbjct: 470 QKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPIS 529
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQSIKVLSQLLRKAKQKNLVIPN K AGS+QGTYEGATVLEARAGFYEKPIATLD
Sbjct: 530 FLLSRGQSIKVLSQLLRKAKQKNLVIPNAKHAGSDQGTYEGATVLEARAGFYEKPIATLD 589
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMAYNLCY TLVTPEDA KLNLPPE NKTPSGE FVK NLQKGILPEILEE
Sbjct: 590 FASLYPSIMMAYNLCYCTLVTPEDACKLNLPPEHFNKTPSGEIFVKPNLQKGILPEILEE 649
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARKRAKADLKEAKDP EKAVLDGRQLALKISANSVYGFTGATVGQLPC+EISSSVTS
Sbjct: 650 LLTARKRAKADLKEAKDPFEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTS 709
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGRQMIEHTKKLVEDKFTT+GGY+HNAEVIYGDTDSVMVQFGVP+VEAAM LGREAADYI
Sbjct: 710 YGRQMIEHTKKLVEDKFTTLGGYKHNAEVIYGDTDSVMVQFGVPSVEAAMVLGREAADYI 769
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
SGTFIKPIKLEFEKVYYPYLLISKKRYAGL+WTNP KFDKMDTKGIETVRRDNCLLVKNL
Sbjct: 770 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLFWTNPNKFDKMDTKGIETVRRDNCLLVKNL 829
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
V ECLHKIL+DRD+PGAVQYVK+TISDLLMNR+DLSLLVITKGLTKTGDDYEVKAAHVEL
Sbjct: 830 VNECLHKILIDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGDDYEVKAAHVEL 889
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRDAATAPNVGDRVPYVI+KAAKGAKAYERSEDPIYVLEN+IPID YYLENQIS
Sbjct: 890 AERMRKRDAATAPNVGDRVPYVIVKAAKGAKAYERSEDPIYVLENSIPIDPQYYLENQIS 949
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--SNGT 937
KPLLRIFEPILKNASKELL G HTRSI ISTPSNSGIMKFAK+QL+CIGCKAL+ S+ T
Sbjct: 950 KPLLRIFEPILKNASKELLHGSHTRSIFISTPSNSGIMKFAKKQLTCIGCKALLGKSDKT 1009
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LCSHCKGREAELYCK V+ V +LE++FGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK
Sbjct: 1010 LCSHCKGREAELYCKAVANVSDLEMVFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 1069
Query: 998 AQKDMAEAKLQLDRWNF 1014
AQKDMAEAK QL+RWNF
Sbjct: 1070 AQKDMAEAKEQLERWNF 1086
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/400 (76%), Positives = 348/400 (87%), Gaps = 5/400 (1%)
Query: 4 SNGSARKRPPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIE 63
+NG+ARK PP S + + +++F+DEDVFLDE+LL DE++LILRDIE
Sbjct: 2 NNGNARKSRPPPHHPSPAPPPKHQALSQ---EEDFVDEDVFLDESLL--DEDALILRDIE 56
Query: 64 QRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIF 123
+RQ ASR++KWARPPLS Y+SQ +SI+FQQL+IDYVIG+S++ELLP SG AAI+RIF
Sbjct: 57 ERQALASRISKWARPPLSQDYLSQSKSIVFQQLEIDYVIGESHKELLPNLSGPAAILRIF 116
Query: 124 GVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHI 183
GVTREGHSVCC VHGFEPYFYISCP GMGPDDIS FH+ LE RM+E NRN+K P FVR I
Sbjct: 117 GVTREGHSVCCHVHGFEPYFYISCPSGMGPDDISLFHRTLEARMKEVNRNNKAPNFVRRI 176
Query: 184 EMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLF 243
E+VQ+RSIMYYQQQ Q FLKIVVALPTMV SCRGILDRGIQ++G GMKSFMTYESNVLF
Sbjct: 177 ELVQRRSIMYYQQQTFQSFLKIVVALPTMVTSCRGILDRGIQIEGFGMKSFMTYESNVLF 236
Query: 244 ALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFR 303
ALRFMIDCN+VGGNWIEVPVGKY+KT ++LSYCQLEFDCLYSD+IS PEGEFSKMAPFR
Sbjct: 237 ALRFMIDCNVVGGNWIEVPVGKYKKTVRSLSYCQLEFDCLYSDLISHAPEGEFSKMAPFR 296
Query: 304 ILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSF 363
ILSFDIECAGRKGHFPEPT DPVIQVANLVTLQGE QPF+RNVMTL +C+PI GVDV+SF
Sbjct: 297 ILSFDIECAGRKGHFPEPTQDPVIQVANLVTLQGEDQPFVRNVMTLNTCSPIAGVDVLSF 356
Query: 364 ETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
+TERDVLLAWRD IREVDPD++IGYNICKFDLPYLIE+ +
Sbjct: 357 DTERDVLLAWRDLIREVDPDIIIGYNICKFDLPYLIERAE 396
>gi|224083478|ref|XP_002307042.1| predicted protein [Populus trichocarpa]
gi|222856491|gb|EEE94038.1| predicted protein [Populus trichocarpa]
Length = 1081
Score = 1170 bits (3028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/617 (91%), Positives = 590/617 (95%), Gaps = 2/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLM I+NYVEMARVTGVP+S
Sbjct: 465 QKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMLIYNYVEMARVTGVPLS 524
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQSIKVLSQLLRKAK+KNLVIPNVKQAGSEQG YEGATVLE +AGFYEKPIATLD
Sbjct: 525 FLLARGQSIKVLSQLLRKAKEKNLVIPNVKQAGSEQGKYEGATVLEPKAGFYEKPIATLD 584
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMAYNLCY TLVTPED RKLNLPPEC+NKTPSGETFVKSNLQKGILPEILEE
Sbjct: 585 FASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPECINKTPSGETFVKSNLQKGILPEILEE 644
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARKRAKADLKEAKDP EKAVLDGRQLALKISANSVYGFTGATV QLPC+EISSSVTS
Sbjct: 645 LLTARKRAKADLKEAKDPFEKAVLDGRQLALKISANSVYGFTGATVAQLPCLEISSSVTS 704
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGRQMIEHTKKLVEDKFT +GGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA+ I
Sbjct: 705 YGRQMIEHTKKLVEDKFTILGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAECI 764
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
SGTFIKPIKLEFEKVYYPYLLISKKRYAGL+WTNP+KFDKMDTKGIETVRRDNCLLVKNL
Sbjct: 765 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLFWTNPDKFDKMDTKGIETVRRDNCLLVKNL 824
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
VTECLHKIL+DRD+PGAVQ+VK+TISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL
Sbjct: 825 VTECLHKILIDRDVPGAVQFVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 884
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRDAATAPNVGDRVPYVIIK AKGAKA+E+SEDPIYVLENNIPID YYLENQIS
Sbjct: 885 AERMRKRDAATAPNVGDRVPYVIIKGAKGAKAFEKSEDPIYVLENNIPIDPQYYLENQIS 944
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG--T 937
KPLLRIFEPILKNASKELL G HTRSISISTPS GIMKFAK+QL+CIGCK L+SN T
Sbjct: 945 KPLLRIFEPILKNASKELLQGSHTRSISISTPSTGGIMKFAKKQLTCIGCKTLLSNSDRT 1004
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LCS+CKGREAELYCK+ S + ELE LFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK
Sbjct: 1005 LCSNCKGREAELYCKSESVLSELEQLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 1064
Query: 998 AQKDMAEAKLQLDRWNF 1014
AQKDMA AK QLDRW+F
Sbjct: 1065 AQKDMAGAKTQLDRWSF 1081
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/379 (79%), Positives = 344/379 (90%), Gaps = 7/379 (1%)
Query: 23 KQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSS 82
K QA TPT +D+EFLDEDVFLDETL+ EDEE+L ++RQ SRL+KWARP LS
Sbjct: 18 KHQAITPT---VDEEFLDEDVFLDETLIAEDEENLN----KERQVLTSRLSKWARPKLSD 70
Query: 83 GYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPY 142
GYVSQ QSI+FQQL+IDYVIG++++ELLP SGSAAI+RIFGVT EGHSVCC VHGFEPY
Sbjct: 71 GYVSQSQSIIFQQLEIDYVIGETHKELLPDRSGSAAILRIFGVTGEGHSVCCLVHGFEPY 130
Query: 143 FYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPF 202
FY+SCP GM PDDISHFH+ILEG+MRE NRN+KVP+FVR IE+V KRSIMYYQQQ+S PF
Sbjct: 131 FYVSCPPGMNPDDISHFHKILEGKMREVNRNTKVPKFVRRIELVHKRSIMYYQQQQSHPF 190
Query: 203 LKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP 262
LKIVVALPTMV+ CRGILD+GIQ+DGLGM+SFMTYESNVLFALRFMIDCN+VGGNWIEVP
Sbjct: 191 LKIVVALPTMVSGCRGILDKGIQIDGLGMRSFMTYESNVLFALRFMIDCNVVGGNWIEVP 250
Query: 263 VGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPT 322
GKY+KT+K+LS CQLEFDCLYS++IS EGEFSKMAPFRILSFDIECAGRKGHFPEPT
Sbjct: 251 AGKYKKTSKSLSNCQLEFDCLYSELISHAAEGEFSKMAPFRILSFDIECAGRKGHFPEPT 310
Query: 323 HDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDP 382
HDPVIQVANLVTLQGE QPF+RN+MTL SC+PIVGVDVMSF+TER+VL+AW++FIREVDP
Sbjct: 311 HDPVIQVANLVTLQGEDQPFVRNIMTLNSCSPIVGVDVMSFDTEREVLIAWKEFIREVDP 370
Query: 383 DVMIGYNICKFDLPYLIEK 401
D++IGYNICKFDLPYLIE+
Sbjct: 371 DIIIGYNICKFDLPYLIER 389
>gi|218185393|gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indica Group]
Length = 1087
Score = 1166 bits (3017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/617 (91%), Positives = 592/617 (95%), Gaps = 2/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNGN+ETRRRLAVYCLKDAYLPQRLLDKLM+I+NYVEMARVTGVPIS
Sbjct: 471 QKEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQRLLDKLMYIYNYVEMARVTGVPIS 530
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQSIKVLSQLLRKAKQKNLVIPN+K S Q T+EGATVLEARAGFYEKPIATLD
Sbjct: 531 FLLSRGQSIKVLSQLLRKAKQKNLVIPNIKGQASGQDTFEGATVLEARAGFYEKPIATLD 590
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMAYNLCY TLV PEDARKLNLPPE VNKTPSGETFVK ++QKGILPEILEE
Sbjct: 591 FASLYPSIMMAYNLCYCTLVPPEDARKLNLPPESVNKTPSGETFVKPDVQKGILPEILEE 650
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRAKADLKEAKDP E+AVLDGRQLALKISANSVYGFTGATVGQLPC+EISSSVTS
Sbjct: 651 LLAARKRAKADLKEAKDPFERAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTS 710
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGRQMIEHTKKLVEDKFTT+GGYEHNAEVIYGDTDSVMVQFGV TVE AMKLGREAADYI
Sbjct: 711 YGRQMIEHTKKLVEDKFTTLGGYEHNAEVIYGDTDSVMVQFGVSTVEDAMKLGREAADYI 770
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
SGTFIKPIKLEFEK+Y+PYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL
Sbjct: 771 SGTFIKPIKLEFEKIYFPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 830
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
VTECLHKILVDRD+PGAVQYVK+TISDLLMNR+DLSLLVITKGLTKTG+DY VKAAHVEL
Sbjct: 831 VTECLHKILVDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAAHVEL 890
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRDAATAP VGDRVPYVIIKAAKGAKAYERSEDPIYVL+NNIPID YYLENQIS
Sbjct: 891 AERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNNIPIDPQYYLENQIS 950
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--SNGT 937
KPLLRIFEPILKNAS+ELL G HTR++SISTPSNSGIMKFAK+QL+C+GCKA+I SN T
Sbjct: 951 KPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLTCLGCKAVISGSNQT 1010
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LCSHCKGREAELYCKTV V ELE+LFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR+K
Sbjct: 1011 LCSHCKGREAELYCKTVGNVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRRK 1070
Query: 998 AQKDMAEAKLQLDRWNF 1014
AQKDMAEA++QL RW+F
Sbjct: 1071 AQKDMAEARVQLQRWDF 1087
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 276/393 (70%), Positives = 325/393 (82%), Gaps = 25/393 (6%)
Query: 33 VIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQC-QSI 91
V +++ +DEDVFLDET+L EDEE+L+L D + + ASRL++W RP L + S C +++
Sbjct: 46 VEEEDMMDEDVFLDETILAEDEEALLLLD--RDEALASRLSRWKRPALPADLASGCSRNV 103
Query: 92 MFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGM 151
FQQL+IDYVIG+S++ LLP SSG AAI+RIFGVTREGHSVCC+VHGFEPYFYISCP GM
Sbjct: 104 AFQQLEIDYVIGESHKVLLPNSSGPAAILRIFGVTREGHSVCCQVHGFEPYFYISCPMGM 163
Query: 152 GPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPT 211
GPDDIS FHQ LEGRM+++NRNS VP+FV+ IE+VQK++IM+YQ Q+SQPFLKIVVALPT
Sbjct: 164 GPDDISRFHQTLEGRMKDSNRNSNVPRFVKRIELVQKQTIMHYQPQQSQPFLKIVVALPT 223
Query: 212 MVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
MVASCRGIL+RGI ++GLG KSF+TYESN+LFALRFMIDCNIVGGNWIEVP GK
Sbjct: 224 MVASCRGILERGITIEGLGSKSFLTYESNILFALRFMIDCNIVGGNWIEVPAGK------ 277
Query: 272 TLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVAN 331
YSD++S EGE SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQ+AN
Sbjct: 278 ------------YSDLVSHAAEGEHSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIAN 325
Query: 332 LVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNIC 391
LVTLQGE QPF+RNVMTLKSC+PIVGVDVMSF+TERDVLLAWRDFIREVDPD++IGYNIC
Sbjct: 326 LVTLQGEGQPFVRNVMTLKSCSPIVGVDVMSFDTERDVLLAWRDFIREVDPDIIIGYNIC 385
Query: 392 KFDLPYLIEKED----VHHSIISDLQNGNAETR 420
KFDLPYLIE+ + V I+ ++N R
Sbjct: 386 KFDLPYLIERAEVLKIVEFPILGRIRNSRVRVR 418
>gi|242070347|ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
gi|241936293|gb|EES09438.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
Length = 1099
Score = 1165 bits (3014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/617 (91%), Positives = 590/617 (95%), Gaps = 2/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNGN+ETRRRLAVYCLKDAYLPQRLLDKLM+I+NYVEMARVTGVPIS
Sbjct: 483 QKEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQRLLDKLMYIYNYVEMARVTGVPIS 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQSIKVLSQLLRKAKQKNLVIPN+K GS Q T+EGATVLEARAGFYEKPIATLD
Sbjct: 543 FLLSRGQSIKVLSQLLRKAKQKNLVIPNIKGQGSGQDTFEGATVLEARAGFYEKPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMAYNLCY TLV PEDARKLNLPPE +NKTPSGE FVK LQKGILPEILEE
Sbjct: 603 FASLYPSIMMAYNLCYCTLVPPEDARKLNLPPESINKTPSGEIFVKPELQKGILPEILEE 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRAKADLKEAKDPLE+AVLDGRQLALKISANSVYGFTGATVGQLPC+EISSSVTS
Sbjct: 663 LLAARKRAKADLKEAKDPLERAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTS 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGV TV+ AMKLGREAADYI
Sbjct: 723 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVSTVQDAMKLGREAADYI 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
SGTF KPIKLEFEKVY+PYLLISKKRYAGLYWTNPEKFDKMD KGIETVRRDNCLLVKNL
Sbjct: 783 SGTFTKPIKLEFEKVYFPYLLISKKRYAGLYWTNPEKFDKMDAKGIETVRRDNCLLVKNL 842
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
VTECLHKILVDRD+PGAVQYVK+TISDLLMNR+DLSLLVITKGLTKTG+DY VKAAHVEL
Sbjct: 843 VTECLHKILVDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAAHVEL 902
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRD ATAP VGDRVPYVIIKAAKGAKAYE+SEDPIYVL+NNIPID YYLENQIS
Sbjct: 903 AERMRKRDPATAPTVGDRVPYVIIKAAKGAKAYEKSEDPIYVLDNNIPIDPQYYLENQIS 962
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG--T 937
KPLLRIFEPILKNASKELL G HTRS+SISTPSNSGIMKFAK+QL+C+GCKA+IS T
Sbjct: 963 KPLLRIFEPILKNASKELLHGSHTRSVSISTPSNSGIMKFAKKQLTCLGCKAVISGASQT 1022
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LCSHCKGREAELYCKTV+ V +LE+LFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR+K
Sbjct: 1023 LCSHCKGREAELYCKTVANVSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRRK 1082
Query: 998 AQKDMAEAKLQLDRWNF 1014
AQKDMAEA+LQLDRW+F
Sbjct: 1083 AQKDMAEARLQLDRWDF 1099
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 278/391 (71%), Positives = 339/391 (86%), Gaps = 7/391 (1%)
Query: 35 DDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQC-QSIMF 93
+++ +DEDVFLDE++L EDE +L++ +++ + ASRLA+W RP L S + C +++ F
Sbjct: 42 EEDMMDEDVFLDESILAEDEAALLM--LQRDEALASRLARWKRPALPSDLAAGCSRAVAF 99
Query: 94 QQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGP 153
QQL+IDYVIG+S++ELLP SSGSAAI+RIFGVTREGHS+CC+VHGFEPYFYI CP GMGP
Sbjct: 100 QQLEIDYVIGESHKELLPNSSGSAAILRIFGVTREGHSICCQVHGFEPYFYIGCPSGMGP 159
Query: 154 DDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMV 213
DDIS FHQ LEGRM+E+NR+S VP+FV+ +E+VQK++IM+YQ Q+SQPFLKIVVALPTMV
Sbjct: 160 DDISRFHQTLEGRMKESNRSSNVPRFVKRVELVQKQTIMHYQTQESQPFLKIVVALPTMV 219
Query: 214 ASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL 273
ASCRGIL+RGI ++GLG KSF+TYESN+LFALRFMIDCNIVGGNWIE+P GKYRK A+ +
Sbjct: 220 ASCRGILERGIMIEGLGSKSFLTYESNILFALRFMIDCNIVGGNWIELPAGKYRKAARLM 279
Query: 274 SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLV 333
SYCQLE DCLYSD++S EGE+SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQ+ANLV
Sbjct: 280 SYCQLELDCLYSDLVSHAAEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLV 339
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
T QGE QPF++NVMTLKSC+PIVGVDV SF+TERD+LLAWRDFIREVDPD++IGYNICKF
Sbjct: 340 THQGEGQPFVQNVMTLKSCSPIVGVDVRSFDTERDILLAWRDFIREVDPDIIIGYNICKF 399
Query: 394 DLPYLIEKEDV----HHSIISDLQNGNAETR 420
D+PYLIE+ +V I+ ++N R
Sbjct: 400 DMPYLIERAEVLKIAEFPILGRIRNSRVRVR 430
>gi|242060584|ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
gi|241931412|gb|EES04557.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
Length = 1101
Score = 1164 bits (3010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/617 (91%), Positives = 589/617 (95%), Gaps = 2/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNGN ETRRRLAVYCLKDAYLPQRLLDKL++I+NYVEMARVTGVPIS
Sbjct: 485 QKEDVHHSIISDLQNGNPETRRRLAVYCLKDAYLPQRLLDKLLYIYNYVEMARVTGVPIS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQSIKVLSQLLRKAKQKNLVIPN+K GS Q T+EGATVLEARAGFYEKPIATLD
Sbjct: 545 FLLSRGQSIKVLSQLLRKAKQKNLVIPNIKGQGSGQDTFEGATVLEARAGFYEKPIATLD 604
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMAYNLCY TLV PEDARKLNLPPE +NKTPSGE FVK LQKGILPEILEE
Sbjct: 605 FASLYPSIMMAYNLCYCTLVPPEDARKLNLPPESINKTPSGEIFVKPELQKGILPEILEE 664
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRAKADLKEAKDPLE+AVLDGRQLALKISANSVYGFTGATVGQLPC+EISSSVTS
Sbjct: 665 LLAARKRAKADLKEAKDPLERAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTS 724
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGV TVE AMKLGREAADYI
Sbjct: 725 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVSTVEDAMKLGREAADYI 784
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
SGTF KPIKLEFEKVY+PYLLISKKRYAGLYWTNPEKFDKMD KGIETVRRDNCLLVKNL
Sbjct: 785 SGTFTKPIKLEFEKVYFPYLLISKKRYAGLYWTNPEKFDKMDAKGIETVRRDNCLLVKNL 844
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
VTECLHKILVDRD+PGAVQYVK+TISDLLMNR+DLSLLVITKGLTKTG+DY VKAAHVEL
Sbjct: 845 VTECLHKILVDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAAHVEL 904
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRD ATAP VGDRVPYVIIKAAKGAKAYE+SEDPIYVL+NNIPID YYLENQIS
Sbjct: 905 AERMRKRDPATAPTVGDRVPYVIIKAAKGAKAYEKSEDPIYVLDNNIPIDPQYYLENQIS 964
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG--T 937
KPLLRIFEPILKNASKELL G HTRS+SISTPSNSGIMKFAK+QL+C+GCKA+IS T
Sbjct: 965 KPLLRIFEPILKNASKELLHGSHTRSVSISTPSNSGIMKFAKKQLTCLGCKAVISGASQT 1024
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LCSHCKGREAELYCKTV+ V +LE+LFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR+K
Sbjct: 1025 LCSHCKGREAELYCKTVANVSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRRK 1084
Query: 998 AQKDMAEAKLQLDRWNF 1014
AQKDMAEA+LQLDRW+F
Sbjct: 1085 AQKDMAEARLQLDRWDF 1101
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 273/383 (71%), Positives = 332/383 (86%), Gaps = 7/383 (1%)
Query: 43 VFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQC-QSIMFQQLDIDYV 101
VFLDE++L EDE +L++ +++ + ASRLA+W RP L + + C +++ FQQL+IDYV
Sbjct: 52 VFLDESILAEDEAALLM--LQRDEALASRLARWKRPALPADLAAGCSRTVAFQQLEIDYV 109
Query: 102 IGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQ 161
I +S++ELLP SSGSAAI+RIFGVTREGHS+CC+VHGFEPYFYI CP GMGPDDISHFHQ
Sbjct: 110 IDESHKELLPNSSGSAAILRIFGVTREGHSICCQVHGFEPYFYIGCPSGMGPDDISHFHQ 169
Query: 162 ILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD 221
LEGRM+E+NR+S VP+FV+ +E+VQK++IM+YQ Q+SQPFLKIVVALPTMVASCRGIL+
Sbjct: 170 TLEGRMKESNRSSNVPRFVKRVELVQKQTIMHYQTQQSQPFLKIVVALPTMVASCRGILE 229
Query: 222 RGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFD 281
RGI ++GLG KSF+TYESN+LFALRFMIDCNIVGGNWIE+P GKYRK A+ +SYCQLE D
Sbjct: 230 RGIMIEGLGSKSFLTYESNILFALRFMIDCNIVGGNWIELPAGKYRKAARVMSYCQLELD 289
Query: 282 CLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQP 341
CLYSD++S EGE+SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQ+ANLVT QGE QP
Sbjct: 290 CLYSDLVSHAAEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTHQGEGQP 349
Query: 342 FIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
F++NVMTLKSC+PIVGVDVMSF+ ERD+LLAWR+FIREVDPD++IGYNICKFD+PYLIE+
Sbjct: 350 FVQNVMTLKSCSPIVGVDVMSFDAERDILLAWRNFIREVDPDIIIGYNICKFDMPYLIER 409
Query: 402 EDV----HHSIISDLQNGNAETR 420
+V I+ ++N R
Sbjct: 410 AEVLKIAEFPILGRIRNSRVRVR 432
>gi|115484523|ref|NP_001067405.1| Os11g0186400 [Oryza sativa Japonica Group]
gi|13124219|sp|Q9LRE6.1|DPOD1_ORYSJ RecName: Full=DNA polymerase delta catalytic subunit
gi|9188570|dbj|BAA99573.1| OsPol delta large subunit [Oryza sativa Japonica Group]
gi|62734232|gb|AAX96341.1| dna polymerase delta catalytic subunit (ec 2.7.7.7) [Oryza sativa
Japonica Group]
gi|77549018|gb|ABA91815.1| DNA polymerase delta catalytic subunit, putative, expressed [Oryza
sativa Japonica Group]
gi|113644627|dbj|BAF27768.1| Os11g0186400 [Oryza sativa Japonica Group]
Length = 1105
Score = 1163 bits (3009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/617 (90%), Positives = 591/617 (95%), Gaps = 2/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNGN+ETRRRLAVYCLKDAYLPQRLLDKLM+I+NYVEMARVTGVPIS
Sbjct: 489 QKEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQRLLDKLMYIYNYVEMARVTGVPIS 548
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQSIKVLSQLLRKAKQKNLVIPN+K S Q T+EGATVLEARAGFYEKPIATLD
Sbjct: 549 FLLSRGQSIKVLSQLLRKAKQKNLVIPNIKGQASGQDTFEGATVLEARAGFYEKPIATLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMAYNLCY TLV PEDARKLNLPPE VNKTPSGETFVK ++QKGILPEILEE
Sbjct: 609 FASLYPSIMMAYNLCYCTLVPPEDARKLNLPPESVNKTPSGETFVKPDVQKGILPEILEE 668
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRAKADLKEAKDP E+AVLDGRQLALKISANSVYGFTGATVGQLPC+EISSSVTS
Sbjct: 669 LLAARKRAKADLKEAKDPFERAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTS 728
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGRQMIEHTKKLVEDKFTT+GGYEHNAEVIYGDTDSVMVQFGV TVE AMKLGREAADYI
Sbjct: 729 YGRQMIEHTKKLVEDKFTTLGGYEHNAEVIYGDTDSVMVQFGVSTVEDAMKLGREAADYI 788
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
SGTFIKPIKLEFEK+Y+PYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL
Sbjct: 789 SGTFIKPIKLEFEKIYFPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 848
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
VTECLHKILVDRD+PGAVQYVK+TISDLLMNR+DLSLLVITKGLTKTG+DY VKAAHVEL
Sbjct: 849 VTECLHKILVDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAAHVEL 908
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRDAATAP VGDRVPYVIIKAAKGAKAYERSEDPIYVL+NNIPID YYLENQIS
Sbjct: 909 AERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNNIPIDPQYYLENQIS 968
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--SNGT 937
KPLLRIFEPILKNAS+ELL G HTR++SISTPSNSGIMKFAK+QL+C+GCKA+I SN T
Sbjct: 969 KPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLTCLGCKAVISGSNQT 1028
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LC HCKGREAELYCKTV V ELE+LFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR+K
Sbjct: 1029 LCFHCKGREAELYCKTVGNVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRRK 1088
Query: 998 AQKDMAEAKLQLDRWNF 1014
AQKDMAEA++QL RW+F
Sbjct: 1089 AQKDMAEARVQLQRWDF 1105
Score = 624 bits (1608), Expect = e-175, Method: Compositional matrix adjust.
Identities = 287/391 (73%), Positives = 338/391 (86%), Gaps = 7/391 (1%)
Query: 35 DDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQC-QSIMF 93
+++ +DEDVFLDET+L EDEE+L+L D + + ASRL++W RP L + S C +++ F
Sbjct: 48 EEDMMDEDVFLDETILAEDEEALLLLD--RDEALASRLSRWRRPALPADLASGCSRNVAF 105
Query: 94 QQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGP 153
QQL+IDYVIG+S++ LLP SSG AAI+RIFGVTREGHSVCC+VHGFEPYFYISCP GMGP
Sbjct: 106 QQLEIDYVIGESHKVLLPNSSGPAAILRIFGVTREGHSVCCQVHGFEPYFYISCPMGMGP 165
Query: 154 DDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMV 213
DDIS FHQ LEGRM+++NRNS VP+FV+ IE+VQK++IM+YQ Q+SQPFLKIVVALPTMV
Sbjct: 166 DDISRFHQTLEGRMKDSNRNSNVPRFVKRIELVQKQTIMHYQPQQSQPFLKIVVALPTMV 225
Query: 214 ASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL 273
ASCRGIL+RGI ++GLG KSF+TYESN+LFALRFMIDCNIVGGNWIEVP GKY K A+ +
Sbjct: 226 ASCRGILERGITIEGLGSKSFLTYESNILFALRFMIDCNIVGGNWIEVPAGKYMKAARIM 285
Query: 274 SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLV 333
SYCQLE DCLYSD++S EGE SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQ+ANLV
Sbjct: 286 SYCQLELDCLYSDLVSHAAEGEHSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLV 345
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
TLQGE QPF+RNVMTLKSC+PIVGVDVMSF+TERDVLLAWRDFIREVDPD++IGYNICKF
Sbjct: 346 TLQGEGQPFVRNVMTLKSCSPIVGVDVMSFDTERDVLLAWRDFIREVDPDIIIGYNICKF 405
Query: 394 DLPYLIEKED----VHHSIISDLQNGNAETR 420
DLPYLIE+ + V I+ ++N R
Sbjct: 406 DLPYLIERAEVLKIVEFPILGRIRNSRVRVR 436
>gi|357157316|ref|XP_003577757.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Brachypodium
distachyon]
Length = 1106
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/655 (86%), Positives = 606/655 (92%), Gaps = 7/655 (1%)
Query: 367 RDVLLAWR---DFIREVDPDVMIG-YNICKFDLPYLIE-KEDVHHSIISDLQNGNAETRR 421
+DV + R D ++ V D + Y++ +L E KEDVHHSIISDLQNGN+ETRR
Sbjct: 452 KDVTVEGRVQFDLLQAVQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIISDLQNGNSETRR 511
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
RLAVYCLKDAYLPQRLLDKLM+I+NYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ+
Sbjct: 512 RLAVYCLKDAYLPQRLLDKLMYIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQR 571
Query: 482 NLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTP 541
NLVIPN+K GS Q T+EGATVLEARAGFYEKPIATLDFASLYPSIMMA+NLCY TLV P
Sbjct: 572 NLVIPNIKGQGSGQDTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAHNLCYCTLVPP 631
Query: 542 EDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKA 601
ED RKLNLPPE + KTPSGE FVK LQKGILPEILEELL ARKRAKADLKEAKDP E+A
Sbjct: 632 EDVRKLNLPPESLYKTPSGEIFVKPELQKGILPEILEELLTARKRAKADLKEAKDPFERA 691
Query: 602 VLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGG 661
VLDGRQLALKISANSVYGFTGATVGQLPC+EISSSVTSYGRQMIEHTKKLVEDKFTT+GG
Sbjct: 692 VLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLGG 751
Query: 662 YEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLI 721
YEHNAEVIYGDTDSVMVQFGV TVE AMKLGREAADYISGTFIKPIKLEFEKVY+PYLLI
Sbjct: 752 YEHNAEVIYGDTDSVMVQFGVSTVEDAMKLGREAADYISGTFIKPIKLEFEKVYFPYLLI 811
Query: 722 SKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVK 781
SKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD+PGAVQYVK
Sbjct: 812 SKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDVPGAVQYVK 871
Query: 782 STISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYV 841
+TISDLLMNR+DLSLLVITKGLTKTG+DY VKAAHVELAERMRKRDAATAP VGDRVPYV
Sbjct: 872 NTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAAHVELAERMRKRDAATAPTVGDRVPYV 931
Query: 842 IIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGD 901
IIKAAKGAKAYE+SEDPIYVL+NNIPID YYLENQISKPLLRIFEPILKNAS+ELL G
Sbjct: 932 IIKAAKGAKAYEKSEDPIYVLDNNIPIDPQYYLENQISKPLLRIFEPILKNASRELLHGS 991
Query: 902 HTRSISISTPSNSGIMKFAKRQLSCIGCKALIS--NGTLCSHCKGREAELYCKTVSQVQE 959
HTR++SISTPSNSGIMKFAK+QL+C+GCKA+IS N TLCSHCKGREAELYCKTV+ V +
Sbjct: 992 HTRAVSISTPSNSGIMKFAKKQLTCLGCKAVISGPNQTLCSHCKGREAELYCKTVANVSD 1051
Query: 960 LEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
LE+LFG+LWTQCQECQGSLHQDVLCTSRDCPIFYRR+KAQKDMAEA++QLDRW+F
Sbjct: 1052 LEMLFGKLWTQCQECQGSLHQDVLCTSRDCPIFYRRRKAQKDMAEARVQLDRWDF 1106
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 277/371 (74%), Positives = 328/371 (88%), Gaps = 3/371 (0%)
Query: 35 DDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQC-QSIMF 93
+++ +DEDVFLDE +L EDE +L+L D + + ASRL++W RP L + VS C +S+ F
Sbjct: 49 EEDMMDEDVFLDEAILAEDEAALLLLD--RDEALASRLSRWKRPALPADLVSGCSRSVAF 106
Query: 94 QQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGP 153
QQLDIDYVIG+S+RELLP +SG AAIIRIFGVT+EGHSVCC+VHGFEPYFYISCP GMGP
Sbjct: 107 QQLDIDYVIGESHRELLPNTSGPAAIIRIFGVTKEGHSVCCQVHGFEPYFYISCPSGMGP 166
Query: 154 DDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMV 213
DDIS F Q LE RM+E+NR+S VP+FV+ +++VQK++IM+YQ QKSQ FLKIVVALPTMV
Sbjct: 167 DDISRFQQALEVRMKESNRSSNVPRFVKRVDLVQKQTIMHYQTQKSQSFLKIVVALPTMV 226
Query: 214 ASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL 273
ASCRGIL+RGI ++G G KSF+TYESN+LFALRFMIDCNIVGGNWIEVP GKYRK A+ +
Sbjct: 227 ASCRGILERGITIEGFGSKSFLTYESNILFALRFMIDCNIVGGNWIEVPRGKYRKAARIM 286
Query: 274 SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLV 333
SYCQLE DC+YSD++S EGE+SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQ+ANL+
Sbjct: 287 SYCQLELDCIYSDLVSHAAEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLL 346
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
TLQGE QPF+RNVMTLKSC+PIVGVDVMSF+TERD+LLAWRD IRE DPD++IGYNICKF
Sbjct: 347 TLQGEAQPFVRNVMTLKSCSPIVGVDVMSFDTERDILLAWRDLIREADPDIIIGYNICKF 406
Query: 394 DLPYLIEKEDV 404
DLPYLIE+ +V
Sbjct: 407 DLPYLIERAEV 417
>gi|62954913|gb|AAY23282.1| Similar to dna polymerase delta catalytic subunit (ec 2.7.7.7) [Oryza
sativa Japonica Group]
Length = 629
Score = 1154 bits (2986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/629 (89%), Positives = 590/629 (93%), Gaps = 15/629 (2%)
Query: 401 KEDVHHSIISDLQNGNAETRRRLAVYCLK-------------DAYLPQRLLDKLMFIFNY 447
KEDVHHSIISDLQNGN+ETRRRLAVYCLK DAYLPQRLLDKLM+I+NY
Sbjct: 1 KEDVHHSIISDLQNGNSETRRRLAVYCLKVGLLDCQWLRYLPDAYLPQRLLDKLMYIYNY 60
Query: 448 VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEAR 507
VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPN+K S Q T+EGATVLEAR
Sbjct: 61 VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNIKGQASGQDTFEGATVLEAR 120
Query: 508 AGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSN 567
AGFYEKPIATLDFASLYPSIMMAYNLCY TLV PEDARKLNLPPE VNKTPSGETFVK +
Sbjct: 121 AGFYEKPIATLDFASLYPSIMMAYNLCYCTLVPPEDARKLNLPPESVNKTPSGETFVKPD 180
Query: 568 LQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQ 627
+QKGILPEILEELLAARKRAKADLKEAKDP E+AVLDGRQLALKISANSVYGFTGATVGQ
Sbjct: 181 VQKGILPEILEELLAARKRAKADLKEAKDPFERAVLDGRQLALKISANSVYGFTGATVGQ 240
Query: 628 LPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEA 687
LPC+EISSSVTSYGRQMIEHTKKLVEDKFTT+GGYEHNAEVIYGDTDSVMVQFGV TVE
Sbjct: 241 LPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLGGYEHNAEVIYGDTDSVMVQFGVSTVED 300
Query: 688 AMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIET 747
AMKLGREAADYISGTFIKPIKLEFEK+Y+PYLLISKKRYAGLYWTNPEKFDKMDTKGIET
Sbjct: 301 AMKLGREAADYISGTFIKPIKLEFEKIYFPYLLISKKRYAGLYWTNPEKFDKMDTKGIET 360
Query: 748 VRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTG 807
VRRDNCLLVKNLVTECLHKILVDRD+PGAVQYVK+TISDLLMNR+DLSLLVITKGLTKTG
Sbjct: 361 VRRDNCLLVKNLVTECLHKILVDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTG 420
Query: 808 DDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP 867
+DY VKAAHVELAERMRKRDAATAP VGDRVPYVIIKAAKGAKAYERSEDPIYVL+NNIP
Sbjct: 421 EDYAVKAAHVELAERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNNIP 480
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCI 927
ID YYLENQISKPLLRIFEPILKNAS+ELL G HTR++SISTPSNSGIMKFAK+QL+C+
Sbjct: 481 IDPQYYLENQISKPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLTCL 540
Query: 928 GCKALI--SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCT 985
GCKA+I SN TLC HCKGREAELYCKTV V ELE+LFGRLWTQCQECQGSLHQDVLCT
Sbjct: 541 GCKAVISGSNQTLCFHCKGREAELYCKTVGNVSELEMLFGRLWTQCQECQGSLHQDVLCT 600
Query: 986 SRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
SRDCPIFYRR+KAQKDMAEA++QL RW+F
Sbjct: 601 SRDCPIFYRRRKAQKDMAEARVQLQRWDF 629
>gi|222615647|gb|EEE51779.1| hypothetical protein OsJ_33228 [Oryza sativa Japonica Group]
Length = 1100
Score = 1152 bits (2981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/630 (89%), Positives = 591/630 (93%), Gaps = 15/630 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLK-------------DAYLPQRLLDKLMFIFN 446
+KEDVHHSIISDLQNGN+ETRRRLAVYCLK DAYLPQRLLDKLM+I+N
Sbjct: 471 QKEDVHHSIISDLQNGNSETRRRLAVYCLKVGLLDCQWLRYLPDAYLPQRLLDKLMYIYN 530
Query: 447 YVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEA 506
YVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPN+K S Q T+EGATVLEA
Sbjct: 531 YVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNIKGQASGQDTFEGATVLEA 590
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKS 566
RAGFYEKPIATLDFASLYPSIMMAYNLCY TLV PEDARKLNLPPE VNKTPSGETFVK
Sbjct: 591 RAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVPPEDARKLNLPPESVNKTPSGETFVKP 650
Query: 567 NLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG 626
++QKGILPEILEELLAARKRAKADLKEAKDP E+AVLDGRQLALKISANSVYGFTGATVG
Sbjct: 651 DVQKGILPEILEELLAARKRAKADLKEAKDPFERAVLDGRQLALKISANSVYGFTGATVG 710
Query: 627 QLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVE 686
QLPC+EISSSVTSYGRQMIEHTKKLVEDKFTT+GGYEHNAEVIYGDTDSVMVQFGV TVE
Sbjct: 711 QLPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLGGYEHNAEVIYGDTDSVMVQFGVSTVE 770
Query: 687 AAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIE 746
AMKLGREAADYISGTFIKPIKLEFEK+Y+PYLLISKKRYAGLYWTNPEKFDKMDTKGIE
Sbjct: 771 DAMKLGREAADYISGTFIKPIKLEFEKIYFPYLLISKKRYAGLYWTNPEKFDKMDTKGIE 830
Query: 747 TVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKT 806
TVRRDNCLLVKNLVTECLHKILVDRD+PGAVQYVK+TISDLLMNR+DLSLLVITKGLTKT
Sbjct: 831 TVRRDNCLLVKNLVTECLHKILVDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKT 890
Query: 807 GDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNI 866
G+DY VKAAHVELAERMRKRDAATAP VGDRVPYVIIKAAKGAKAYERSEDPIYVL+NNI
Sbjct: 891 GEDYAVKAAHVELAERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNNI 950
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSC 926
PID YYLENQISKPLLRIFEPILKNAS+ELL G HTR++SISTPSNSGIMKFAK+QL+C
Sbjct: 951 PIDPQYYLENQISKPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLTC 1010
Query: 927 IGCKALI--SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLC 984
+GCKA+I SN TLC HCKGREAELYCKTV V ELE+LFGRLWTQCQECQGSLHQDVLC
Sbjct: 1011 LGCKAVISGSNQTLCFHCKGREAELYCKTVGNVSELEMLFGRLWTQCQECQGSLHQDVLC 1070
Query: 985 TSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
TSRDCPIFYRR+KAQKDMAEA++QL RW+F
Sbjct: 1071 TSRDCPIFYRRRKAQKDMAEARVQLQRWDF 1100
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/391 (70%), Positives = 322/391 (82%), Gaps = 25/391 (6%)
Query: 35 DDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQC-QSIMF 93
+++ +DEDVFLDET+L EDEE+L+L D + + A RL +W RP L + S C +++ F
Sbjct: 48 EEDMMDEDVFLDETILAEDEEALLLLD--RDEALALRLFRWRRPALPADLASGCSRNVAF 105
Query: 94 QQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGP 153
QQL+IDYVIG+S++ LLP SSG AAI+RIFGVTREGHSVCC+VHGFEPYFYISCP GMGP
Sbjct: 106 QQLEIDYVIGESHKVLLPNSSGPAAILRIFGVTREGHSVCCQVHGFEPYFYISCPMGMGP 165
Query: 154 DDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMV 213
DDIS FHQ LEGRM+++NRNS VP+FV+ IE+VQK++IM+YQ Q+SQPFLKIVVALPTMV
Sbjct: 166 DDISRFHQTLEGRMKDSNRNSNVPRFVKRIELVQKQTIMHYQPQQSQPFLKIVVALPTMV 225
Query: 214 ASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL 273
ASCRGIL+RGI ++GLG KSF+TYESN+LFALRFMIDCNIVGGNWIEVP GK
Sbjct: 226 ASCRGILERGITIEGLGSKSFLTYESNILFALRFMIDCNIVGGNWIEVPAGK-------- 277
Query: 274 SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLV 333
YSD++S EGE SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQ+ANLV
Sbjct: 278 ----------YSDLVSHAAEGEHSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLV 327
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
TLQGE QPF+RNVMTLKSC+PIVGVDVMSF+TERDVLLAWRDFIREVDPD++IGYNICKF
Sbjct: 328 TLQGEGQPFVRNVMTLKSCSPIVGVDVMSFDTERDVLLAWRDFIREVDPDIIIGYNICKF 387
Query: 394 DLPYLIEKED----VHHSIISDLQNGNAETR 420
DLPYLIE+ + V I+ ++N R
Sbjct: 388 DLPYLIERAEVLKIVEFPILGRIRNSRVRVR 418
>gi|308800812|ref|XP_003075187.1| DPOD1_ORYSA DNA polymerase delta catalytic subunit gb|AAX96341.1| dna
pol (ISS) [Ostreococcus tauri]
gi|116061741|emb|CAL52459.1| DPOD1_ORYSA DNA polymerase delta catalytic subunit gb|AAX96341.1| dna
pol (ISS), partial [Ostreococcus tauri]
Length = 1115
Score = 1152 bits (2979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/1042 (56%), Positives = 737/1042 (70%), Gaps = 99/1042 (9%)
Query: 67 DFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP--LSSGSAAIIRIFG 124
D A R A W R PL + +++FQQLDIDYV+ D E L G AA++R+FG
Sbjct: 79 DAADR-ANWVRKPLKKPLCDRSDALLFQQLDIDYVV-DKPHETLGSRRGKGDAAVVRMFG 136
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT +GHSVC VHGFEPYFY S P+ G D F + L + A +N+ FV +
Sbjct: 137 VTNDGHSVCAHVHGFEPYFYASVPENFGEADCETFRRRLNEEVSSARKNAP-GVFVIAVT 195
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY---ESNV 241
+ +K+S+M+Y + K + F KI + LP MV++ RGIL++G + G+ SF TY ESN+
Sbjct: 196 LERKQSLMHYSEMKDRLFAKITMGLPNMVSAARGILEKGFSVPGIRDGSFTTYPTFESNI 255
Query: 242 LFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAP 301
++ALRFM+DC +VGGNWIE+P G Y+ +K +S+CQ+E D Y IIS EGE+SK+AP
Sbjct: 256 VYALRFMVDCGVVGGNWIELPAGDYKVRSKKVSHCQIEVDVSYDKIISHPAEGEYSKLAP 315
Query: 302 FRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMT------------- 348
FRILS DIECAGRKGHFP+ DPVIQ+A LVT QG +P IR V T
Sbjct: 316 FRILSVDIECAGRKGHFPDAKQDPVIQIATLVTEQGSDKPIIRAVWTLDTCAPIVGADVL 375
Query: 349 ---------------LKSCAP--IVGVDVMSFE--------------------------- 364
L+ C P ++G ++++F+
Sbjct: 376 SFKDERELLRNWGSFLRGCDPDLLIGYNIVNFDFPYLLDRAETLGVADFPYWGRMIGTKV 435
Query: 365 TERDVLLAWR------------------DFIREVDPDVMIG-YNICKFDLPYLIE-KEDV 404
RD + + + D +R + D + Y++ +L E KEDV
Sbjct: 436 RMRDTVFSSKAYGTHESKEISCEGRVQFDMLRAIQRDYKLSSYSLNAVSAHFLGEQKEDV 495
Query: 405 HHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSR 464
H+S IS+LQNG ETRRRLAVYCLKDAYLPQRLLDKLM+++NY+EMARVTGVP+++LL+R
Sbjct: 496 HYSAISELQNGTPETRRRLAVYCLKDAYLPQRLLDKLMYMYNYIEMARVTGVPLNYLLTR 555
Query: 465 GQSIKVLSQLLRKAKQKNLVIPNV--KQAGSEQG----TYEGATVLEARAGFYEKPIATL 518
GQSIKV+SQLLRKA+Q+N++IP++ ++ G+ Q YEGATVLEA++G+YE P+ATL
Sbjct: 556 GQSIKVMSQLLRKARQRNMLIPHMAKREGGNVQAEGGVAYEGATVLEAKSGYYEVPVATL 615
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DFASLYPSIMMA+NLCYSTLV KLN PE V +P+G+TFVK+N KGILPEILE
Sbjct: 616 DFASLYPSIMMAHNLCYSTLVPKHMVSKLN--PEDVGTSPAGDTFVKANNVKGILPEILE 673
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARKRAKADLK+A DP KAVLDGRQLALKISANSVYGFTGATVGQLPC+EISSS T
Sbjct: 674 ELLGARKRAKADLKKATDPFVKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSTT 733
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MI+HTKK+VE+++TT+ GY NAEVIYGDTDSVM++F P + AM+LG EAA Y
Sbjct: 734 AYGRTMIDHTKKMVEERYTTMNGYAGNAEVIYGDTDSVMIKFNTPDLAEAMRLGEEAAVY 793
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S TF+KPIKLEFEKVY+PYLLISKKRYAGL WTN EK+DKMDTKGIETVRRDNCLLV+
Sbjct: 794 VSDTFLKPIKLEFEKVYWPYLLISKKRYAGLLWTNTEKYDKMDTKGIETVRRDNCLLVRQ 853
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
+V L KIL +RD+ GAV+YV++TI+DLLMN++D S LVITKG TK D Y VK AH+E
Sbjct: 854 VVETVLEKILKERDVQGAVKYVQNTIADLLMNKLDFSQLVITKGFTKEADSYGVKMAHIE 913
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RMR+RD ATAP VGDR+ YVIIKAAK AKAYE+SEDPIY L+NN+PIDT++YL++ +
Sbjct: 914 LAQRMRQRDPATAPVVGDRIAYVIIKAAKNAKAYEKSEDPIYALDNNLPIDTNHYLDHYL 973
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPS--NSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL NA L G+HTR I+ TP+ GIM+FAK +LSCIGC+A IS+
Sbjct: 974 TKPLLRIFEPILHNAQSVLFHGEHTRRIAQPTPTAKAGGIMQFAKIRLSCIGCRAPISDE 1033
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+LC +C EA + ++ V LE F RLWTQCQ CQGSLHQDVLCTSRDCPIF
Sbjct: 1034 KLSKSLCKNCLKEEAMHLQRALASVNGLEEDFNRLWTQCQRCQGSLHQDVLCTSRDCPIF 1093
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
YRRKK QKD+ EA QL R+++
Sbjct: 1094 YRRKKVQKDLTEAAAQLKRFDW 1115
>gi|334188613|ref|NP_001190611.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
gi|332010439|gb|AED97822.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
Length = 1112
Score = 1145 bits (2962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/642 (86%), Positives = 594/642 (92%), Gaps = 2/642 (0%)
Query: 375 DFIREVDPD-VMIGYNICKFDLPYLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAY 432
D I+ + D + Y++ +L E KEDVHHSII+DLQNGNAETRRRLAVYCLKDAY
Sbjct: 471 DLIQAIHRDHKLSSYSLNSVSAHFLSEQKEDVHHSIITDLQNGNAETRRRLAVYCLKDAY 530
Query: 433 LPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAG 492
LPQRLLDKLMFI+NYVEMARVTGVPISFLL+RGQSIKVLSQLLRK KQKNLV+PN KQ+G
Sbjct: 531 LPQRLLDKLMFIYNYVEMARVTGVPISFLLARGQSIKVLSQLLRKGKQKNLVLPNAKQSG 590
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPE 552
SEQGTYEGATVLEAR GFYEKPIATLDFASLYPSIMMAYNLCY TLVTPED RKLNLPPE
Sbjct: 591 SEQGTYEGATVLEARTGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPE 650
Query: 553 CVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKI 612
V KTPSGETFVK LQKGILPEILEELL ARKRAKADLKEAKDPLEKAVLDGRQLALKI
Sbjct: 651 HVTKTPSGETFVKQTLQKGILPEILEELLTARKRAKADLKEAKDPLEKAVLDGRQLALKI 710
Query: 613 SANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGD 672
SANSVYGFTGATVGQLPC+EISSSVTSYGRQMIE TKKLVEDKFTT+GGY++NAEVIYGD
Sbjct: 711 SANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEQTKKLVEDKFTTLGGYQYNAEVIYGD 770
Query: 673 TDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWT 732
TDSVMVQFGV VEAAM LGREAA++ISGTFIKPIKLEFEKVY+PYLLI+KKRYAGL WT
Sbjct: 771 TDSVMVQFGVSDVEAAMTLGREAAEHISGTFIKPIKLEFEKVYFPYLLINKKRYAGLLWT 830
Query: 733 NPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRM 792
NP++FDKMDTKGIETVRRDNCLLVKNLVTE L+KIL+DRD+PGA + VK TISDLLMNR+
Sbjct: 831 NPQQFDKMDTKGIETVRRDNCLLVKNLVTESLNKILIDRDVPGAAENVKKTISDLLMNRI 890
Query: 793 DLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAY 852
DLSLLVITKGLTKTGDDYEVK+AH ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAY
Sbjct: 891 DLSLLVITKGLTKTGDDYEVKSAHGELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAY 950
Query: 853 ERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPS 912
ERSEDPIYVL+NNIPID +YYLENQISKPLLRIFEP+LKNASKELL G HTRSISI+TPS
Sbjct: 951 ERSEDPIYVLQNNIPIDPNYYLENQISKPLLRIFEPVLKNASKELLHGSHTRSISITTPS 1010
Query: 913 NSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQ 972
NSGIMKFAK+QLSC+GCK ISNGTLC+ CKGREAELYCK VSQV ELE +FGRLWTQCQ
Sbjct: 1011 NSGIMKFAKKQLSCVGCKVPISNGTLCASCKGREAELYCKNVSQVAELEEVFGRLWTQCQ 1070
Query: 973 ECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
ECQGSLHQDVLCTSRDCPIFYRR KAQKDMA A+ QLDRW+F
Sbjct: 1071 ECQGSLHQDVLCTSRDCPIFYRRMKAQKDMAVARQQLDRWSF 1112
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 310/426 (72%), Positives = 354/426 (83%), Gaps = 29/426 (6%)
Query: 1 MNRSNGSARKRPPPTPKESWPNKQQATTPTTP-----VIDDEFL-DEDVFLDETLL--PE 52
MNRS G ++KRPPP+ K +AT +TP +DDEF+ +EDVFLDETLL E
Sbjct: 1 MNRS-GISKKRPPPSNTPPPAGKHRATGDSTPSPAIGTLDDEFMMEEDVFLDETLLYGDE 59
Query: 53 DEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPL 112
DEESLILRDIE+R+ SR + WARPPLS Y+S QSI+FQQL+ID +I +S++ELLP
Sbjct: 60 DEESLILRDIEERE---SRSSAWARPPLSPAYLSNSQSIIFQQLEIDSIIAESHKELLPG 116
Query: 113 SSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANR 172
SSG A IIR+FGVTREG+SVCC VHGFEPYFYI+CP GMGPDDIS+FHQ LEGRMRE+N+
Sbjct: 117 SSGQAPIIRMFGVTREGNSVCCFVHGFEPYFYIACPPGMGPDDISNFHQSLEGRMRESNK 176
Query: 173 NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK 232
N+KVP+FV+ IEMVQKRSIMYYQQQKSQ FLKI VALPTMVASCRGILDRG+Q+DGLGMK
Sbjct: 177 NAKVPKFVKRIEMVQKRSIMYYQQQKSQTFLKITVALPTMVASCRGILDRGLQIDGLGMK 236
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
SF TYESN+LF LRFM+DC+IVGGNWIEVP GKY+K A+TLSYCQLEF CLYSD+IS
Sbjct: 237 SFQTYESNILFVLRFMVDCDIVGGNWIEVPTGKYKKNARTLSYCQLEFHCLYSDLISHAA 296
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSC 352
EGE+SKMAPFR+LSFDIECAGRKGHFPE HDPVIQ+ANLVTLQGE PF+RNVMTLKSC
Sbjct: 297 EGEYSKMAPFRVLSFDIECAGRKGHFPEAKHDPVIQIANLVTLQGEDHPFVRNVMTLKSC 356
Query: 353 APIVGVDVMSFETERDVLLAWR-----------------DFIREVDPDVMIGYNICKFDL 395
APIVGVDVMSFETER+VLLAWR D IR+VDPD++IGYNICKFDL
Sbjct: 357 APIVGVDVMSFETEREVLLAWRVLFLPLHYYICITSSSSDLIRDVDPDIIIGYNICKFDL 416
Query: 396 PYLIEK 401
PYLIE+
Sbjct: 417 PYLIER 422
>gi|145342057|ref|XP_001416112.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576336|gb|ABO94404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 982
Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/985 (57%), Positives = 704/985 (71%), Gaps = 95/985 (9%)
Query: 122 IFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVR 181
+FGVT+EGHSVC VHGFEPYFY S P+ G D + F + L + A +N+ V
Sbjct: 1 MFGVTKEGHSVCAHVHGFEPYFYASVPENFGEADCAAFRRRLNEEVSAARKNAPGVHVV- 59
Query: 182 HIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY---E 238
+ + +K+S+M+Y K + F KI + LP MV++ RGIL++G + G+ +F TY E
Sbjct: 60 DVSLERKQSLMHYSDVKDRLFAKITMGLPNMVSAARGILEKGFSVPGVRDGAFTTYPTFE 119
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SN+++ALRFM+DC +VGGNWIE PV Y AK S+CQ+E D +Y +IS EGE+SK
Sbjct: 120 SNIVYALRFMVDCAVVGGNWIEFPVNSYTVRAKKASHCQIEVDIMYDKLISHPAEGEYSK 179
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMT---------- 348
+APFRILS DIECAGRKGHFP+ DPVIQ+A LVT QG +P IR V T
Sbjct: 180 LAPFRILSVDIECAGRKGHFPDAQLDPVIQIATLVTEQGSDKPIIRAVWTLDTCAPIVGA 239
Query: 349 ------------------LKSCAP--IVGVDVMSFE------------------------ 364
L+ C P ++G ++++F+
Sbjct: 240 DVLSFKDERELLRNWGNFLRGCDPDLLIGYNIVNFDFPYLLERAEKLGVADFPYWGRLIG 299
Query: 365 ---TERDVLLAWR------------------DFIREVDPDVMIG-YNICKFDLPYLIE-K 401
RD + + + D +R + D + Y++ +L E K
Sbjct: 300 TKVRMRDTVFSSKAYGTHESKEISCEGRVQFDMLRAIQRDYKLSSYSLNAVSAHFLGEQK 359
Query: 402 EDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFL 461
EDVH+S IS+LQNG ETRRRLAVYCLKDAYLPQRLLDKLM+++NY+EMARVTGVP+++L
Sbjct: 360 EDVHYSAISELQNGTPETRRRLAVYCLKDAYLPQRLLDKLMYMYNYIEMARVTGVPLNYL 419
Query: 462 LSRGQSIKVLSQLLRKAKQKNLVIPN-VKQAG----SEQG-TYEGATVLEARAGFYEKPI 515
L+RGQSIKV+SQLLRKA+Q+N++IP+ VKQ G +E G YEGATVL+A+AG+YE PI
Sbjct: 420 LTRGQSIKVMSQLLRKARQRNMLIPHHVKQGGGNVQAEGGVAYEGATVLDAKAGYYEMPI 479
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPE 575
ATLDFASLYPSIMMA+NLCYSTLV + KLN P+ +PSG+TFVK++ KGILPE
Sbjct: 480 ATLDFASLYPSIMMAHNLCYSTLVPKDKVGKLN--PDDYGTSPSGDTFVKASKVKGILPE 537
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
ILEELL ARKRAKADLK+A DPL+KAVLDGRQLALK+SANSVYGFTGA VGQLPC+EISS
Sbjct: 538 ILEELLGARKRAKADLKKATDPLQKAVLDGRQLALKVSANSVYGFTGAMVGQLPCLEISS 597
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
S T+YGR MI+HTKK+VE+K+ TV GY NAEVIYGDTDSVM++F P + +MKLG EA
Sbjct: 598 STTAYGRTMIDHTKKMVEEKYRTVNGYTGNAEVIYGDTDSVMIKFNTPDLAESMKLGEEA 657
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A Y+S TF+KPIKLEFEKVY+PYLLISKKRYAGL WTN E +DKMDTKGIETVRRDNCLL
Sbjct: 658 AVYVSETFLKPIKLEFEKVYWPYLLISKKRYAGLLWTNTENYDKMDTKGIETVRRDNCLL 717
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V+ ++ L KIL RD+ GAV+YV+STI+DLLMNR+D S LVITKG TK D Y VK A
Sbjct: 718 VRQVIETVLEKILKQRDVQGAVKYVQSTIADLLMNRLDFSQLVITKGFTKEADSYGVKMA 777
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
H+ELA+RMR+RD ATAP VGDR+ YVIIKAAK AKAYE+SEDPI+ L+NN+PIDT +YL+
Sbjct: 778 HIELAQRMRQRDPATAPVVGDRIAYVIIKAAKNAKAYEKSEDPIFALDNNLPIDTKHYLD 837
Query: 876 NQISKPLLRIFEPILKNASKELLSGDHTRSISISTPS--NSGIMKFAKRQLSCIGCKALI 933
+ ++KPLLRIFEPIL NA LL G+HTR I+ TP+ GIM+FAK +LSCIGC+A I
Sbjct: 838 HYLTKPLLRIFEPILHNAQSVLLHGEHTRRIAQPTPTAKAGGIMQFAKIRLSCIGCRAPI 897
Query: 934 SN----GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
S+ +LC +C E++ K ++ V LE F RLWTQCQ CQGSLHQDVLCTSRDC
Sbjct: 898 SDEKMSKSLCKNCLNDESQHLRKALASVNNLEGDFNRLWTQCQRCQGSLHQDVLCTSRDC 957
Query: 990 PIFYRRKKAQKDMAEAKLQLDRWNF 1014
PIFYRRKK QKD+ EA QL R+++
Sbjct: 958 PIFYRRKKVQKDLTEATAQLRRFDW 982
>gi|302803951|ref|XP_002983728.1| hypothetical protein SELMODRAFT_180322 [Selaginella moellendorffii]
gi|300148565|gb|EFJ15224.1| hypothetical protein SELMODRAFT_180322 [Selaginella moellendorffii]
Length = 984
Score = 1082 bits (2797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/617 (84%), Positives = 565/617 (91%), Gaps = 2/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN+ETRRRLAVYCLKDAYLPQRLL+KLMFI+NY+EMARVTGVPIS
Sbjct: 368 QKEDVHHSIIADLQNGNSETRRRLAVYCLKDAYLPQRLLEKLMFIYNYIEMARVTGVPIS 427
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQSIKVLSQ+LRK +Q+N V+PN+K G+ Q T+EGATVLEARAGFYEKPIATLD
Sbjct: 428 FLLSRGQSIKVLSQILRKCRQRNFVVPNIKGQGAGQETFEGATVLEARAGFYEKPIATLD 487
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMAYNLCY TLV ED +LN+ PE VNKTPSGE FVK+N++KGILPEILEE
Sbjct: 488 FASLYPSIMMAYNLCYCTLVRTEDQARLNIAPENVNKTPSGEMFVKTNMEKGILPEILEE 547
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRA+ADLKEA D LEKAVLDGRQLALK+SANSVYGFTGATVGQLPC+EISSSVTS
Sbjct: 548 LLAARKRARADLKEATDSLEKAVLDGRQLALKVSANSVYGFTGATVGQLPCLEISSSVTS 607
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGRQMIEHTK LVE +F T Y++NAEVIYGDTDSVMVQFGV TVE AM LGREAADYI
Sbjct: 608 YGRQMIEHTKTLVEGRFNTSNKYDNNAEVIYGDTDSVMVQFGVSTVEDAMNLGREAADYI 667
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S TF KPIKLEFEKVY+PYLLISKKRYAGL WT P K+DKMDTKGIETVRRDNCLLVKN+
Sbjct: 668 SETFTKPIKLEFEKVYFPYLLISKKRYAGLLWTKPAKYDKMDTKGIETVRRDNCLLVKNV 727
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
VT+ LHKILVDRD+PGAV +VK ISDLLMNRMDLSLLVITKGLTKTGDDY VKAAHVEL
Sbjct: 728 VTQSLHKILVDRDVPGAVDFVKGMISDLLMNRMDLSLLVITKGLTKTGDDYAVKAAHVEL 787
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPID YYLENQ+S
Sbjct: 788 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQLS 847
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT-- 937
KPLLRIFEPILKNASKELL G HTRS+ I+TPSNSGIMKFAK+QL+C+GCKA+IS G
Sbjct: 848 KPLLRIFEPILKNASKELLHGSHTRSVYITTPSNSGIMKFAKKQLTCLGCKAIISGGDTP 907
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LC HC GREAELY +TV+ V++LE LFGRLWTQCQ CQGSLHQDVLCTSRDCPIFYRRKK
Sbjct: 908 LCKHCSGREAELYQRTVANVRDLEQLFGRLWTQCQRCQGSLHQDVLCTSRDCPIFYRRKK 967
Query: 998 AQKDMAEAKLQLDRWNF 1014
AQKD++EA+LQ RW+F
Sbjct: 968 AQKDLSEAELQEQRWDF 984
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 214/315 (67%), Positives = 257/315 (81%), Gaps = 4/315 (1%)
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
+P +G AAI+R+FGVT++G+SVCC +HGFEPYFYISCP G PDD S F LE RMRE
Sbjct: 1 MPGRTGPAAILRMFGVTQQGNSVCCHIHGFEPYFYISCPDGWNPDDTSKFRHTLETRMRE 60
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL 229
ANRNSK P FV +EMVQKRS+MY+Q QK++ FLKIVVALPTMVASCRGIL++GI L+G
Sbjct: 61 ANRNSKTPTFVPRVEMVQKRSLMYFQTQKARAFLKIVVALPTMVASCRGILEKGITLEGF 120
Query: 230 GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIIS 289
G K F+TYESN+LFALRFMIDCN+ GGNWIE+P G YR T + LS CQ+E D LY+ I+S
Sbjct: 121 GHKCFITYESNILFALRFMIDCNVGGGNWIELPGGSYRLTPRRLSTCQIEIDILYNKIVS 180
Query: 290 RHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTL 349
G++SK+APFRILSFDIECAGRKGHFPEP HDPVIQ+ANLVT+QGE +P +RNVMTL
Sbjct: 181 HSATGQYSKLAPFRILSFDIECAGRKGHFPEPEHDPVIQIANLVTVQGESRPMVRNVMTL 240
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED----VH 405
KSC+ IVGVDVMSF+TE++VLLAWRD IREVDPD++IGYNICKFD+PYLIE+ V
Sbjct: 241 KSCSAIVGVDVMSFDTEKEVLLAWRDLIREVDPDIIIGYNICKFDMPYLIERAQKLGIVE 300
Query: 406 HSIISDLQNGNAETR 420
++ ++N R
Sbjct: 301 FPVLGRIRNSRVRVR 315
>gi|344257341|gb|EGW13445.1| DNA polymerase delta catalytic subunit [Cricetulus griseus]
Length = 1056
Score = 1073 bits (2774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/983 (55%), Positives = 690/983 (70%), Gaps = 50/983 (5%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSG------SAAIIRIFGVTR 127
+W RP L + + ++FQQL+ID+ +G + +PL G S I+R FGVT
Sbjct: 74 RWKRPALCA-LDPNTEPLIFQQLEIDHYVGSA----VPLPGGPPTSCNSVPILRAFGVTD 128
Query: 128 EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEM 185
EG SVCC +HGF PYFY P G G + +S + L + R K V IE+
Sbjct: 129 EGFSVCCHIHGFAPYFYTPAPPGFGAEHLSDLQRELSTAISRDQRGGKELSGPAVLAIEL 188
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFAL 245
+ S+ Y PFL+I +ALP +VA R +L++GI++ GLG SF YE+NV F +
Sbjct: 189 CSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGTPSFAPYEANVDFEI 248
Query: 246 RFMIDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
RFM+D +IVG NW+E+P GKY +T K + CQLE D L+SD+IS PEG++ ++AP R+
Sbjct: 249 RFMVDADIVGCNWLELPAGKYVWRTEKKATQCQLEVDVLWSDVISHPPEGQWQRIAPLRV 308
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E
Sbjct: 309 LSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYE 368
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIE-------------------KEDVH 405
E D+L AW +FI +DPDV+ GYNI FDLPYLI + ++
Sbjct: 369 REEDLLQAWANFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTGLRSNIR 428
Query: 406 HSIISDLQ-----------NGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVT 454
S Q N +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVT
Sbjct: 429 DSSFQSRQVGRRDSKVVSMNWKEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVT 488
Query: 455 GVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKP 514
GVP+ +LLSRGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ P
Sbjct: 489 GVPLGYLLSRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVP 546
Query: 515 IATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILP 574
IATLDF+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVKS+++KG+LP
Sbjct: 547 IATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLP 606
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
+ILE LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS
Sbjct: 607 QILENLLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEIS 666
Query: 635 SSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGRE 694
SVT +GRQMIE TK+LVE K+T GY NA+V+YGDTDSVM +FGV +V AM LGRE
Sbjct: 667 QSVTGFGRQMIEKTKQLVESKYTLENGYNANAKVVYGDTDSVMCRFGVSSVAEAMSLGRE 726
Query: 695 AADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNC 753
AA+++S F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC
Sbjct: 727 AANWVSSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSQPDTHDRMDCKGLEAVRRDNC 786
Query: 754 LLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVK 813
LV NLVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K
Sbjct: 787 PLVANLVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGK 846
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
AHVELAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YY
Sbjct: 847 QAHVELAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYY 906
Query: 874 LENQISKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKA 931
LE Q++KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ CIGC++
Sbjct: 907 LEQQLAKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRS 966
Query: 932 LISN-GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
+I++ G +C C+ R +ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCP
Sbjct: 967 VINHQGAVCEFCQPRSSELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCP 1026
Query: 991 IFYRRKKAQKDMAEAKLQLDRWN 1013
IFY RKK +KD+ + + L R+
Sbjct: 1027 IFYMRKKVRKDLEDQERLLQRFG 1049
>gi|354497678|ref|XP_003510946.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cricetulus
griseus]
Length = 1070
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/997 (54%), Positives = 691/997 (69%), Gaps = 64/997 (6%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSG------SAAIIRIFGVTR 127
+W RP L + + ++FQQL+ID+ +G + +PL G S I+R FGVT
Sbjct: 74 RWKRPALCA-LDPNTEPLIFQQLEIDHYVGSA----VPLPGGPPTSCNSVPILRAFGVTD 128
Query: 128 EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEM 185
EG SVCC +HGF PYFY P G G + +S + L + R K V IE+
Sbjct: 129 EGFSVCCHIHGFAPYFYTPAPPGFGAEHLSDLQRELSTAISRDQRGGKELSGPAVLAIEL 188
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFAL 245
+ S+ Y PFL+I +ALP +VA R +L++GI++ GLG SF YE+NV F +
Sbjct: 189 CSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGTPSFAPYEANVDFEI 248
Query: 246 RFMIDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
RFM+D +IVG NW+E+P GKY +T K + CQLE D L+SD+IS PEG++ ++AP R+
Sbjct: 249 RFMVDADIVGCNWLELPAGKYVWRTEKKATQCQLEVDVLWSDVISHPPEGQWQRIAPLRV 308
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E
Sbjct: 309 LSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYE 368
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHH------------------ 406
E D+L AW +FI +DPDV+ GYNI FDLPYLI +
Sbjct: 369 REEDLLQAWANFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTGLRSNIR 428
Query: 407 -----------------SIISDLQ---------NGNAETRRRLAVYCLKDAYLPQRLLDK 440
S++ +Q N +TRRRLAVYCLKDA+LP RLL++
Sbjct: 429 DSSFQSRQVGRRDSKVVSMVGRVQMDMLTLLGTNWKEQTRRRLAVYCLKDAFLPLRLLER 488
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVP+ +LLSRGQ +KV+SQLLR+A ++ L++P VK G E Y G
Sbjct: 489 LMVLVNNVEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTG 546
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG 560
ATV+E G+Y+ PIATLDF+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G
Sbjct: 547 ATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTG 606
Query: 561 ETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGF 620
+ FVKS+++KG+LP+ILE LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGF
Sbjct: 607 DEFVKSSVRKGLLPQILENLLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGF 666
Query: 621 TGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQF 680
TGA VG+LPC+EIS SVT +GRQMIE TK+LVE K+T GY NA+V+YGDTDSVM +F
Sbjct: 667 TGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTLENGYNANAKVVYGDTDSVMCRF 726
Query: 681 GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDK 739
GV +V AM LGREAA+++S F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+
Sbjct: 727 GVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSQPDTHDR 786
Query: 740 MDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVI 799
MD KG+E VRRDNC LV NLVT L +ILVDRD GAV + K ISDLL NR+D+S LVI
Sbjct: 787 MDCKGLEAVRRDNCPLVANLVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVI 846
Query: 800 TKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPI 859
TK LT+ DY K AHVELAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP+
Sbjct: 847 TKELTRAAADYAGKQAHVELAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPL 906
Query: 860 YVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIM 917
+VLE+++PIDT YYLE Q++KPLLRIFEPIL E LL GDHTR ++ T G++
Sbjct: 907 FVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLL 966
Query: 918 KFAKRQLSCIGCKALISN-GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG 976
F KR+ CIGC+++I++ G +C C+ R +ELY K VS + LE F RLWTQCQ CQG
Sbjct: 967 AFTKRRNCCIGCRSVINHQGAVCEFCQPRSSELYQKEVSHLNALEERFSRLWTQCQRCQG 1026
Query: 977 SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWN 1013
SLH+DV+CTSRDCPIFY RKK +KD+ + + L R+
Sbjct: 1027 SLHEDVICTSRDCPIFYMRKKVRKDLEDQERLLQRFG 1063
>gi|168003912|ref|XP_001754656.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694277|gb|EDQ80626.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1156
Score = 1060 bits (2740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/618 (82%), Positives = 561/618 (90%), Gaps = 3/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNGN+ETRRRLAVYCLKDAYLPQRLLDKLM+I+NYVEMARVTGVPIS
Sbjct: 539 QKEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQRLLDKLMYIYNYVEMARVTGVPIS 598
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG-TYEGATVLEARAGFYEKPIATL 518
FLL+RGQSIKVLSQLLRKAKQ+N V+PNVK G G ++EGATVL+A+AG+Y+KPIATL
Sbjct: 599 FLLARGQSIKVLSQLLRKAKQRNFVLPNVKSQGVVSGESFEGATVLDAKAGYYDKPIATL 658
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DFASLYPSIMMAYNLCY TLV ED L L PE V KTPSG+ FVK +L+KGILPEILE
Sbjct: 659 DFASLYPSIMMAYNLCYCTLVRAEDQHYLRLEPEQVTKTPSGDMFVKPSLEKGILPEILE 718
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARKRAKADLK A DPLEKAVLDGRQLALKISANSVYGFTGAT+GQLPC+EISSSVT
Sbjct: 719 ELLAARKRAKADLKLATDPLEKAVLDGRQLALKISANSVYGFTGATIGQLPCLEISSSVT 778
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMI+HTKKLV+++FTT Y H+AEVIYGDTDSVMVQFG V AM+LGREAA
Sbjct: 779 SFGRQMIDHTKKLVQERFTTANSYSHDAEVIYGDTDSVMVQFGTSDVHEAMELGREAAQQ 838
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
IS TF +PIKLEFEKVY+PYLLISKKRYAGL WT PEK+DKMDTKGIETVRRDNCLLVKN
Sbjct: 839 ISDTFTQPIKLEFEKVYWPYLLISKKRYAGLLWTKPEKYDKMDTKGIETVRRDNCLLVKN 898
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVTECLHKIL+DRDIPGA+QYVK+TISDLLMNRMDLSLLVITKGLTK GD YE KAAHVE
Sbjct: 899 LVTECLHKILIDRDIPGAIQYVKNTISDLLMNRMDLSLLVITKGLTKAGDAYENKAAHVE 958
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYE+SEDPIYVLENNIPID YYLENQ+
Sbjct: 959 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDPQYYLENQL 1018
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS--NG 936
SKPLLR+F+PILKNASKELL G HTRS+SISTPS GIMKFAK+++SC+GC+ IS N
Sbjct: 1019 SKPLLRLFDPILKNASKELLHGSHTRSVSISTPSTGGIMKFAKKRVSCVGCRTPISEENQ 1078
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC HC+GREAELY KTVS V++LE LFGRLWT+CQ CQGSLHQDVLCTSRDCPIFYRRK
Sbjct: 1079 ILCKHCQGREAELYQKTVSNVRDLEQLFGRLWTECQRCQGSLHQDVLCTSRDCPIFYRRK 1138
Query: 997 KAQKDMAEAKLQLDRWNF 1014
KAQKD+ EA+LQL++W+F
Sbjct: 1139 KAQKDLGEAELQLEKWDF 1156
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/415 (59%), Positives = 310/415 (74%), Gaps = 30/415 (7%)
Query: 3 RSNGSARKRPPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDI 62
R ++ PPP+ T + V+++E DEDVFL+ET
Sbjct: 18 RLQAKGQEMPPPS------------TVSPDVMEEE--DEDVFLEET------LLREEELQ 57
Query: 63 EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRI 122
E R A+ KW RP +SS +Q SI+FQQL+IDY+IG+S++EL P SG AA++R+
Sbjct: 58 ESRAAGAALFTKWRRPAISS-LNTQKSSIVFQQLEIDYIIGESHKELCPYRSGPAAVLRM 116
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRH 182
FGVT+EG+SVCC VHGFEPYFYISC G+GPDD+ LE RMREANRNSK FV
Sbjct: 117 FGVTQEGNSVCCNVHGFEPYFYISCVDGIGPDDVPKLRSTLETRMREANRNSKSQTFVTK 176
Query: 183 IEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVL 242
IE+VQKRS+MYYQ QK++ FLKI V LPTMVA CRGIL++GI +DG+G + F+TYESNVL
Sbjct: 177 IEVVQKRSVMYYQVQKARSFLKIFVGLPTMVAGCRGILEKGINIDGIGQRCFLTYESNVL 236
Query: 243 FALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPF 302
FALRFMIDC+I GGNW+E+PVG Y+K+++ LSYCQLE D YS I+S G++SKMAPF
Sbjct: 237 FALRFMIDCDIAGGNWVELPVGAYQKSSRQLSYCQLELDIHYSKIVSYPAVGQYSKMAPF 296
Query: 303 RILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMS 362
RILSFDIECAGRKGHFPEP HDPVIQ+ANLVT+QGE++P ++NVMTLKSCAPIVG DVMS
Sbjct: 297 RILSFDIECAGRKGHFPEPEHDPVIQIANLVTVQGEQRPMVKNVMTLKSCAPIVGADVMS 356
Query: 363 FETERDVLLAWR---------DFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSI 408
F+TE++VLLAW+ +F++EVDPD++IGYNICKFDLPYLIE + +H +
Sbjct: 357 FDTEKEVLLAWKQLMVVVASQEFVKEVDPDIIIGYNICKFDLPYLIENKLHYHLV 411
>gi|336259478|ref|XP_003344540.1| hypothetical protein SMAC_07548 [Sordaria macrospora k-hell]
gi|380093254|emb|CCC08912.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1071
Score = 1053 bits (2722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/1020 (51%), Positives = 699/1020 (68%), Gaps = 82/1020 (8%)
Query: 55 ESLILRDIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
ES +L + Q +Q+ + + W RPPL + Y S+ FQ ++ +
Sbjct: 68 ESEVLERMSQDISDLKQNNSEKDQAWERPPLPATYNPATDSLCFQSIEAEE--------- 118
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
G A I++FGVT G+SV V F+ Y Y+ P GPDD + LE ++
Sbjct: 119 -GFLHGGQATIKLFGVTENGNSVLLHVKDFKHYLYVQAPVSFGPDDCPKYRTFLETQL-- 175
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMY-YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDG 228
+P H + R MY +Q P++K+ V P + R +++ + +
Sbjct: 176 -----AMPTPAIHSVSLTMRENMYGFQGNTQNPYIKVTVNDPKFLPRVRRLIETN-KANW 229
Query: 229 LGM----KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLY 284
GM S MT++ ++ + LRFM+DC+I G +W+E P G Y+ S CQ+E + Y
Sbjct: 230 KGMWKSDGSIMTFD-DIQYLLRFMVDCSIAGMSWVEAPAGSYQLVTDKHSNCQIEAEMSY 288
Query: 285 SDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIR 344
D+I+ P GE+SKMAP RILSFDIECAGRKG FPEP HD VIQ+AN+VT GEK+PF+R
Sbjct: 289 RDLIAHKPTGEWSKMAPLRILSFDIECAGRKGIFPEPQHDSVIQIANIVTKYGEKKPFVR 348
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLI----- 399
NV L + + IV ++SF+ E D+L WR+F+ +VDPD++IGYNI FD P +
Sbjct: 349 NVFCLDTTSSIVATQILSFDREEDMLREWRNFLEQVDPDIIIGYNIANFDFPKQMGNRDT 408
Query: 400 --------------------------------------EKEDVHHSIISDLQNGNAETRR 421
+KEDVHHS+I++L G E+RR
Sbjct: 409 KATNTNGRLQLDMLQLVQRDYQLRSYTLNAVCSNFLGEQKEDVHHSMITELFEGTPESRR 468
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
RLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +FLL+RGQ +K LSQL RKA ++
Sbjct: 469 RLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFNFLLARGQQVKFLSQLFRKALEQ 528
Query: 482 NLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTP 541
LVIPN++ SE+ YEGATV+E G+Y+ PIATLDFASLYPSIM A+NLCY+TL+
Sbjct: 529 KLVIPNLRPESSEE-QYEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLIKK 587
Query: 542 EDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEK 600
D + NL E TP+G+ FV + +KG+L +ILEELL+ARK+AK +L KDP +K
Sbjct: 588 RDIERWNLKKDEDYIVTPNGDMFVTTKQRKGLLAQILEELLSARKQAKRELAVEKDPFKK 647
Query: 601 AVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVG 660
AVL+GRQLALK+SANSVYG TGAT G+LPC+EI+SSVTS+GRQMIE TKK VE+++T
Sbjct: 648 AVLNGRQLALKVSANSVYGLTGATNGKLPCLEIASSVTSFGRQMIERTKKEVEERYTIAN 707
Query: 661 GYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLL 720
GY H+A+VIYGDTDSVMV+FG + AMKLG++A++Y+SG F+KPIKLEFEKVY+PYLL
Sbjct: 708 GYSHDAQVIYGDTDSVMVKFGTKDLAEAMKLGQDASEYVSGKFVKPIKLEFEKVYFPYLL 767
Query: 721 ISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYV 780
I+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+ ++ + L IL+D+D+PGA YV
Sbjct: 768 INKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQTVIEKVLRMILIDQDVPGAEAYV 827
Query: 781 KSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPY 840
K TI+DLL N++D+S LVITK LTK ++Y+ K AHVELA+RM+KRDA +AP +GDRV Y
Sbjct: 828 KDTIADLLQNKIDMSKLVITKALTK--ENYDAKQAHVELAQRMKKRDAGSAPGLGDRVAY 885
Query: 841 VIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL-KNASKELLS 899
V++K A G+K +ERSEDPIYVLE+N+PIDT YYL+NQ++KPL RIFEPIL + +K LL+
Sbjct: 886 VMVKGAAGSKNFERSEDPIYVLEHNVPIDTKYYLDNQLAKPLGRIFEPILGETKAKSLLT 945
Query: 900 GDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-----SNGTLCSHCKGREAELYCKTV 954
GDHTR +S++ P+ G+MKFAK+ +C+GCK + S G +C+ R ELY KT+
Sbjct: 946 GDHTRVVSVAAPTVGGLMKFAKKTQTCMGCKKPLTGKEESQGAVCADDAPRVGELYKKTL 1005
Query: 955 SQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
+V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIFY R KA+KD+ +A +L R++F
Sbjct: 1006 DKVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIFYMRMKAKKDLEDANKELTRFDF 1065
>gi|154276096|ref|XP_001538893.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus NAm1]
gi|150413966|gb|EDN09331.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus NAm1]
Length = 1086
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/975 (53%), Positives = 689/975 (70%), Gaps = 51/975 (5%)
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
+++ + + +WARP L + S+ ++ FQQ++ E + G +++FG
Sbjct: 131 KENNSEKDQQWARPSLDNFDASR-DNLCFQQIEA---------EEGTIGGGKQPAVKLFG 180
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT GHSV V F Y Y++ P P D F LE + E + + + ++
Sbjct: 181 VTEAGHSVLLHVTHFLHYLYVAAPVSFAPTDCEGFKAYLEHEI-EIHHPA-----IHSVQ 234
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-------IQLDGLGMKSFMTY 237
MV + ++ +Q + P+LKI V P + R +++ G + D G+ +F
Sbjct: 235 MVMRENLFGFQGNQKSPYLKITVTDPRHINKLRTLIETGRANYRGMWRADADGILTF--- 291
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGE 295
N+ + LRFMID + G +W+E P KY+ + +S CQ+E Y D+I+ +GE
Sbjct: 292 -DNIEYILRFMIDTGMSGMSWVEAPASKYQILPMVERMSNCQIEATIHYRDLIAHPNDGE 350
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
++KMAP RILSFDIECAGRKG FPE DPVIQ+AN+VT GE +PFIRNV L +C+ I
Sbjct: 351 WAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESKPFIRNVFVLGTCSLI 410
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIIS----- 410
V ++ F+TE +L+AW++F+ EVDPDV+IGYNI FD PYL+++ + S +S
Sbjct: 411 VNTQLLEFDTEEKMLMAWKNFLVEVDPDVIIGYNIANFDFPYLLKRAEHLKSGLSAAKLH 470
Query: 411 ---DLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQS 467
+L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +FLLSRGQ
Sbjct: 471 PKFELFNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQ 530
Query: 468 IKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPS 526
+K +SQL RKA ++ LVIPN++ ++ SEQ YEGATV+E FY+ PIATLDFASLYPS
Sbjct: 531 VKFISQLFRKALEQQLVIPNLRNESTSEQ--YEGATVIEPIRDFYDVPIATLDFASLYPS 588
Query: 527 IMMAYNLCYSTLVTPE--DARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAAR 584
I+ A+NLCY+TL+ DA ++ + + TP+G+ F S ++KG+L +ILEELL AR
Sbjct: 589 IIQAHNLCYTTLLKKSTIDAHQMKEGEDYI-VTPNGDRFCTSKVRKGLLTQILEELLGAR 647
Query: 585 KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQM 644
KRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS TSYGRQM
Sbjct: 648 KRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTTSYGRQM 707
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
IE TK+ VE K+T GY H+A+V+YGDTDSVMV+FG+ + AMKLG+EAADY+S FI
Sbjct: 708 IEKTKEEVEAKYTIANGYSHDAKVVYGDTDSVMVKFGMKDLAEAMKLGQEAADYVSSKFI 767
Query: 705 KPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
PIKLEFEKVY+PYLLI+KKRYAGLYWT P+K+DKMDTKGIETVRRDNC +V+ ++ L
Sbjct: 768 NPIKLEFEKVYFPYLLINKKRYAGLYWTKPDKYDKMDTKGIETVRRDNCRMVQTVIETVL 827
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMR 824
KIL+DRD+ GA YVK TISDLL N++D+S LVITK L+K DY K AHVELAERM+
Sbjct: 828 RKILIDRDVDGAQSYVKDTISDLLQNKIDMSKLVITKALSKK--DYTAKQAHVELAERMK 885
Query: 825 KRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLR 884
KRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+NQ++KPL R
Sbjct: 886 KRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDNQLAKPLTR 945
Query: 885 IFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-----SNGTL 938
IFEPIL + + +LL+G+HTRSIS++ P+ G+MKF K+ +C+GCK + S+G +
Sbjct: 946 IFEPILGEKKAGQLLTGEHTRSISVAAPTLGGLMKFTKKTQTCMGCKKPLTGKEGSDGAV 1005
Query: 939 CSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKA 998
C C R ELY KT+++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPIFY R KA
Sbjct: 1006 CQDCLPRLGELYTKTLTKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIFYMRMKA 1065
Query: 999 QKDMAEAKLQLDRWN 1013
+KD+ +A+ +L R++
Sbjct: 1066 KKDVEDAEKELARFD 1080
>gi|332028725|gb|EGI68756.1| DNA polymerase delta catalytic subunit [Acromyrmex echinatior]
Length = 1010
Score = 1022 bits (2642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/1021 (51%), Positives = 704/1021 (68%), Gaps = 46/1021 (4%)
Query: 4 SNGSARKRPP-PTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDI 62
S SA K+P E P+ + T + D++FLDE + + E PE E +
Sbjct: 10 SAPSAAKKPKFRDEDEEKPSSFETELATMDLADEDFLDETLLIGEG--PEQENTS----- 62
Query: 63 EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRI 122
AKW+R P S + ++ FQQ++ID+ IG + G I+R+
Sbjct: 63 ----------AKWSRAPPPS-LNPKVDTLSFQQIEIDHYIGKPLPGMPGSKVGPVPIMRM 111
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS--KVPQFV 180
FGVT +G+SVCC VHGF PY ++S P D F + L +++ +++ + +
Sbjct: 112 FGVTEQGNSVCCHVHGFCPYLFVSAPSNFTNDHCKPFKEALNQAVKKDMKSNPDNIQDAI 171
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
+E+V K+S+ Y PFLKI VA+P ++A C+ +L++ + +ESN
Sbjct: 172 LAVELVYKQSMYGYGGNDKLPFLKITVAVPKLIAPCKRLLEQDTVYTAFNY-HYRAFESN 230
Query: 241 VLFALRFMIDCNIVGGNWIEVPVG------KYRKTAKTLSYCQLEFDCLYSDIISRHPEG 294
+ F +RFM+D ++VG +WIE+P G +Y + ++ CQLE D + ++ PEG
Sbjct: 231 IDFDIRFMVDTSVVGCSWIELPPGSWKLRGQYGHMLELITRCQLEVDVAWDAFVAHAPEG 290
Query: 295 EFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP 354
E+SK+APFRILSFDIECAGR+G FPE HDPVIQ+AN+V QGE +PF+RN+ TL +CAP
Sbjct: 291 EWSKIAPFRILSFDIECAGREGIFPEAKHDPVIQIANMVIRQGESEPFLRNIFTLDTCAP 350
Query: 355 IVGVDVMSFETERDVL-LAWRDFIREVDPDVMIGYNICKFDLPYLIE-KEDVHHSIISDL 412
IVG V+SFE E +L + RD+ + Y + +L E KEDV H I+ L
Sbjct: 351 IVGCQVLSFEKESLMLEVLVRDY-------KLRSYTLNAVSYHFLQEQKEDVQHKDITGL 403
Query: 413 QNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLS 472
QNGNA+TRRRLAVYCLKDAYLP RLLDKLM I Y+EMARVTGV IS LL+RGQ IKV+S
Sbjct: 404 QNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSISSLLTRGQQIKVVS 463
Query: 473 QLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYN 532
QLLRK ++K+ ++P V Q +EGATV+E + G+Y PIATLDF+SLYPSI+MA+N
Sbjct: 464 QLLRKTREKDYLMP-VHQGHGTDEQFEGATVIEPKRGYYNDPIATLDFSSLYPSIIMAHN 522
Query: 533 LCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLK 592
LCY+TL+T ++LN+ + + TPS F+K++++KGILPEILE LL ARK+AK +LK
Sbjct: 523 LCYTTLLTIAKKKELNIQEDQITTTPSKSLFIKNSVRKGILPEILENLLVARKKAKTELK 582
Query: 593 EAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLV 652
+ DPL++ VLDGRQ ALK+SANSVYGFTGA +G+LPC+EIS+SVT+YGR MIE TK+ V
Sbjct: 583 QETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLEISASVTAYGRTMIEQTKQEV 642
Query: 653 EDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFE 712
ED F GY+++A VIYGDTDSVMV+FGV +E AMKLG+EAADY++ FIKPIKLEFE
Sbjct: 643 EDHFRIENGYKNDAMVIYGDTDSVMVKFGVKDIEDAMKLGKEAADYVTSKFIKPIKLEFE 702
Query: 713 KVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
KVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV N++ CL +L++R+
Sbjct: 703 KVYFPYLLINKKRYAGLYFTKPDKYDKMDCKGLETVRRDNCPLVANMMNTCLQILLIERN 762
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAP 832
AV Y K ISDLL NR+DLS LVITK LTKT DY K AHVELA +M+KRDA AP
Sbjct: 763 PHAAVDYAKQVISDLLCNRIDLSQLVITKELTKT--DYAAKQAHVELATKMKKRDAGNAP 820
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKN 892
+GDRV YV I AAKG AY+++EDP+Y L+N+IPIDT+YYLENQ++KPL+RIFEPIL +
Sbjct: 821 KLGDRVAYVFISAAKGTPAYQKAEDPVYALQNSIPIDTNYYLENQLAKPLVRIFEPILGD 880
Query: 893 ASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----SNGTLCSHCKGREA 947
++ LL GDHTR+ I+T + F +++ +C+GCKA++ + +C HC+ +EA
Sbjct: 881 KAESLLLKGDHTRTRCIATSQVGALAAFTRKKETCLGCKAVLPPDREDKAVCKHCESQEA 940
Query: 948 ELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKL 1007
EL+ + +LE F RLW +CQ CQGSLHQ+V+C++RDCPIFY R K++ DM +AK+
Sbjct: 941 ELFHNELQAQHKLEEKFSRLWAECQRCQGSLHQEVICSNRDCPIFYMRVKSRLDM-DAKI 999
Query: 1008 Q 1008
+
Sbjct: 1000 K 1000
>gi|351727343|ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glycine max]
gi|3913525|sp|O48901.1|DPOD1_SOYBN RecName: Full=DNA polymerase delta catalytic subunit
gi|2895198|gb|AAC18443.1| DNA polymerase delta [Glycine max]
Length = 1088
Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/557 (88%), Positives = 519/557 (93%), Gaps = 1/557 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFI+NYVEMARVTGVPIS
Sbjct: 446 QKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPIS 505
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQSIKVLSQLLR+A+QKNLVIPN KQAGSEQGT+EGATVLEARAGFYEKPIATLD
Sbjct: 506 FLLSRGQSIKVLSQLLRRARQKNLVIPNAKQAGSEQGTFEGATVLEARAGFYEKPIATLD 565
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMAYNLCY TLV PEDARKLN+PPE VN+TPSGETFVKSNLQKGILPEILEE
Sbjct: 566 FASLYPSIMMAYNLCYCTLVIPEDARKLNIPPESVNRTPSGETFVKSNLQKGILPEILEE 625
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGAT+GQLPC+EISSSVTS
Sbjct: 626 LLTARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATIGQLPCLEISSSVTS 685
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGRQMIEHTKKLVEDKFTT+ GYEHNAEVIYGDTDSVMVQFGV VE AM LGREAA++I
Sbjct: 686 YGRQMIEHTKKLVEDKFTTLNGYEHNAEVIYGDTDSVMVQFGVSAVEEAMNLGREAAEHI 745
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
SGTF KPIKLEFEKVYYPYLLISKKRYAGL+WT P+ FDKMDTKGIETVRRDNCLLVKNL
Sbjct: 746 SGTFTKPIKLEFEKVYYPYLLISKKRYAGLFWTKPDNFDKMDTKGIETVRRDNCLLVKNL 805
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
V +CLHKIL+DRDIPGAVQYVK+ ISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL
Sbjct: 806 VNDCLHKILIDRDIPGAVQYVKNAISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 865
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPID HYYLENQIS
Sbjct: 866 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPHYYLENQIS 925
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLC 939
KP+LRIFEPILKNASKELL G HTRSISISTPSNSGI++FAK+QL + K ++
Sbjct: 926 KPILRIFEPILKNASKELLHGSHTRSISISTPSNSGILRFAKKQLPALVVKLYLARVITL 985
Query: 940 SHCKGREAELYCKTVSQ 956
S +E L C TV Q
Sbjct: 986 SVHIAKEGRLSC-TVKQ 1001
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/367 (84%), Positives = 342/367 (93%)
Query: 35 DDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQ 94
++EF+DEDVF++ETL+ EDEESLILRDIEQRQ A+RL+KW RPPLS+GYV+Q +S++FQ
Sbjct: 4 EEEFMDEDVFINETLVSEDEESLILRDIEQRQALANRLSKWTRPPLSAGYVAQSRSVLFQ 63
Query: 95 QLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPD 154
QL+IDYVI +S+ ELLP SSG AIIRIFGVT+EGHSVCC VHGFEPYFYI CP GMGPD
Sbjct: 64 QLEIDYVIAESHGELLPNSSGPVAIIRIFGVTKEGHSVCCNVHGFEPYFYICCPPGMGPD 123
Query: 155 DISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVA 214
DISHFHQ LEGRMREANRNS V +FVR IEMVQ+RSIMYYQQ SQPFLKIVVALPTMVA
Sbjct: 124 DISHFHQTLEGRMREANRNSNVGKFVRRIEMVQRRSIMYYQQSNSQPFLKIVVALPTMVA 183
Query: 215 SCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLS 274
SCRGILDRGIQLDGLGMKSF+TYESNVLFALRFMIDCNIVGGNWI +P GKY+KTAK+LS
Sbjct: 184 SCRGILDRGIQLDGLGMKSFLTYESNVLFALRFMIDCNIVGGNWIGIPAGKYKKTAKSLS 243
Query: 275 YCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVT 334
YCQLEFDCLYS++IS PEGE+SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQ+ANLVT
Sbjct: 244 YCQLEFDCLYSELISHAPEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVT 303
Query: 335 LQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFD 394
LQGE QPFIRNVMTLKSC+PIVGVDVM FETER+VLLAWRDFIREVDPD++IGYNICKFD
Sbjct: 304 LQGEDQPFIRNVMTLKSCSPIVGVDVMPFETEREVLLAWRDFIREVDPDIIIGYNICKFD 363
Query: 395 LPYLIEK 401
LPYLIE+
Sbjct: 364 LPYLIER 370
>gi|440804295|gb|ELR25172.1| polymerase (DNA directed), delta 1, catalytic subunit [Acanthamoeba
castellanii str. Neff]
Length = 1003
Score = 1001 bits (2587), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/987 (51%), Positives = 664/987 (67%), Gaps = 91/987 (9%)
Query: 115 GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQG-MGPDDISHFHQILEGRMREANRN 173
G II ++G+TREGHSV +HG PYFY+ P DD F L R R
Sbjct: 7 GPVPIIHMYGLTREGHSVLVHLHGVLPYFYVPAPHAQFSEDDCESFRLALNRRCASHARG 66
Query: 174 SKVPQ-FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL-GM 231
+K + +V + + QK SIM Y K +PFL+I +A+P +V + RGIL+ G+ DG
Sbjct: 67 AKERKDYVIAVAVEQKESIMGYHADKRKPFLRITMAMPPLVPAARGILEAGLVFDGYPNG 126
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA--KTLSYCQLEFDCLYSDIIS 289
++F TYESN+ F LRFMID + G W+E+ KY + +S+CQ E +DI
Sbjct: 127 RTFQTYESNIAFVLRFMIDKKMTGAAWLELAANKYEVVPDDQKVSHCQFELHAKETDITG 186
Query: 290 RHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTL 349
PEG +S +APFR+LSFDIECAGR+G FPEP DPVIQ+AN+V++QGE P ++NV T+
Sbjct: 187 HAPEGVWSDIAPFRVLSFDIECAGRRGVFPEPEMDPVIQIANVVSVQGENGPIVKNVFTV 246
Query: 350 KSCAP------------------------------IVGVDVMSFE--------------- 364
K C+P + G ++++F+
Sbjct: 247 KKCSPIAGAEVRCYRTEAEMLLAWRKFVEIVDPDILTGYNIINFDIWYLLTRAQKLGLVD 306
Query: 365 ------------TERDVLLAWRDFIREVDPDVMIG--------------YNICKFDLPYL 398
T +D + + F + ++ IG Y + + L Y+
Sbjct: 307 FPFWGRIKAQRSTMKDTTFSSKAFGKRDSKEIKIGGRVQLDVLLVITRDYKLRSYTLNYV 366
Query: 399 IE------KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMAR 452
+ KEDVHHSII+DL NG + RRRLAVYC+KDA LPQRLLDKLM I NY+EMAR
Sbjct: 367 SQHFLEEQKEDVHHSIITDLYNGTNDQRRRLAVYCIKDALLPQRLLDKLMCIINYIEMAR 426
Query: 453 VTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQA---GSEQGTYEGATVLEARAG 509
VTGVPI+FLL+RGQ IKVLSQL R A ++L+IP VK A G + Y+GA V+ +
Sbjct: 427 VTGVPIAFLLTRGQQIKVLSQLYRIANTEDLLIPAVKVAKPTGEDGKGYKGAIVIAPKTA 486
Query: 510 FYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQ 569
+Y+ PIATLDFASLYPSIM+A+NLCYSTL+ P + + PPE ++P GE FV+ +
Sbjct: 487 YYDVPIATLDFASLYPSIMIAHNLCYSTLLAPGEVN--SHPPESYERSPGGECFVREETK 544
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
G+LP IL LL AR RAKA++K+ +P ++AVL+GRQLALK+SANSVYGFTGAT+G+LP
Sbjct: 545 PGLLPRILNGLLEARARAKAEMKKETNPFKQAVLNGRQLALKVSANSVYGFTGATIGKLP 604
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAM 689
C+ ISS+VT+YGR+MIE T+ V +++ GY H A+VIYGDTDSVMV FGV TVE AM
Sbjct: 605 CLAISSAVTAYGREMIEKTQATVLERYRVENGYSHTADVIYGDTDSVMVNFGVKTVEEAM 664
Query: 690 KLGREAADYISG-TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
KLGREAA+YI+ F +PIKLEFEKVYYPYLLISKKRYAGL+W P+K+D MD KGIETV
Sbjct: 665 KLGREAAEYITKHCFEQPIKLEFEKVYYPYLLISKKRYAGLWWGRPDKYDHMDAKGIETV 724
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRDNC LV+N+V ECL +IL++R+I AV YVK ISDLL NR+DLSLLVITK +++ +
Sbjct: 725 RRDNCALVRNVVQECLDRILIERNIDSAVDYVKQIISDLLCNRLDLSLLVITKQISRNSE 784
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPI 868
DY+ K AHVELAERM KRDA +AP VGDRVPYVI+K AKG++AYER+EDP++VLE+NIP+
Sbjct: 785 DYKAKQAHVELAERMAKRDAGSAPVVGDRVPYVIVKGAKGSRAYERAEDPLHVLEHNIPL 844
Query: 869 DTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIG 928
D YYL Q+ KPLLRIF+PILKN + LL+G+HTR+IS+ TP+ GI+ FAKR LSC+G
Sbjct: 845 DAQYYLHQQLEKPLLRIFKPILKN-PESLLTGEHTRTISVQTPTVGGIVSFAKRTLSCMG 903
Query: 929 CKALISNG--TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTS 986
CKA + G ++C +C+ EA Y + +++V LE F WTQCQ CQGS H+ VLCTS
Sbjct: 904 CKAPLVGGETSVCRYCRPMEAVYYQERLARVHRLEQEFASAWTQCQRCQGSFHETVLCTS 963
Query: 987 RDCPIFYRRKKAQKDMAEAKLQLDRWN 1013
DCPIFY RKK QKD+A++ L R++
Sbjct: 964 CDCPIFYMRKKIQKDLADSHSLLLRFD 990
>gi|324120742|dbj|BAJ78762.1| DNA polymerase delta catalytic subunit [Uroleucon nigrotuberculatum]
Length = 1093
Score = 967 bits (2500), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/1031 (49%), Positives = 675/1031 (65%), Gaps = 99/1031 (9%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
A W+RPP+ +S+ FQQL ID IG+ + + +G I R+FG+T +G+SV
Sbjct: 65 ALWSRPPMKE-INPVTESLAFQQLTIDNYIGEPMKGMSGAQTGIVPITRMFGITMDGNSV 123
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHF----HQILEGRMREANRNSKVPQFVRHIEMVQK 188
CC VHG+ PYFY + P+G GP+ F + ++ MR N+N KV + V +E+VQK
Sbjct: 124 CCNVHGYSPYFYTNAPEGFGPEHCKEFKTRLNAVVLSDMR-GNQN-KVQEPVLMVEIVQK 181
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
++ Y ++ + +LKI +ALP +V + + +L++ L ++ +E+NV + +RFM
Sbjct: 182 INLYGYHGEELEKYLKITMALPKLVPAAKRLLEKETVLPTFSGHNYRMFETNVDYDMRFM 241
Query: 249 IDCNIVGGNWIEVPVGKY-----RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFR 303
+D IVG +WIE+P G Y K+ S CQLE D + +I+ PEGE+SK+APFR
Sbjct: 242 VDLKIVGCSWIELPAGTYAIRDSNSRVKSHSRCQLEVDVGWQKMIAHAPEGEWSKVAPFR 301
Query: 304 ILSFDIECAGRKGHFPEPTHDP------VIQVAN--------------------LVTLQG 337
ILSFDIECAGRKG FPE DP ++Q+ N +++ +
Sbjct: 302 ILSFDIECAGRKGIFPEADKDPVIQIANMVQIENKRLIRNVFTLNTCAPIVGSQVISCEK 361
Query: 338 EKQPFIRNVMTLKSCAP--IVGVDVMSFETE---------------------------RD 368
E + ++ C P I G ++ +F+ R+
Sbjct: 362 ENTMLEKWAAFVRECDPDIITGYNINNFDLPYLLNRAKHLHTKNFNFLGRIKDIQSVIRE 421
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLI----------------------EKEDVHH 406
+L + R + V I + FDL YL+ +KEDVHH
Sbjct: 422 QVLQSKQMGRRENKSVNIDGRV-PFDL-YLVLVRDYKLRSYSLNSVSYHFLQEQKEDVHH 479
Query: 407 SIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQ 466
SII+DLQNG +TRRRLAVYCLKDA+LP +LLDKLM + NY+EMARVTGVP+ LL+ GQ
Sbjct: 480 SIITDLQNGTPQTRRRLAVYCLKDAFLPLKLLDKLMCLINYMEMARVTGVPLGSLLTGGQ 539
Query: 467 SIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPS 526
KV+SQLLR A++KN ++P + G + +EGATV+E G+Y PIATLDF SLYPS
Sbjct: 540 QAKVVSQLLRLAQEKNYIMPTM-AGGMQDEQFEGATVIEPIKGYYADPIATLDFTSLYPS 598
Query: 527 IMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKR 586
IMMA+NLCY+TL++ + LNL KTPSG F+ ++++KG+LPEILE LL+ARK+
Sbjct: 599 IMMAHNLCYTTLLSQKTINLLNLSENDYTKTPSGSYFLSNSIRKGLLPEILENLLSARKK 658
Query: 587 AKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIE 646
AK DLK DP +K VLDGRQLALKISANSVYGFTGA VG+LPC+EIS+SVTSYGR MIE
Sbjct: 659 AKTDLKSETDPFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISTSVTSYGRTMIE 718
Query: 647 HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKP 706
TK+ VE K+ GYEH+A VIYGDTDSVMV+FGV T+E AM+LGREAA+Y++ FIKP
Sbjct: 719 RTKQEVEQKYCIANGYEHDAVVIYGDTDSVMVKFGVKTIEKAMELGREAAEYVTTKFIKP 778
Query: 707 IKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHK 766
IKL+FEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDN LV N++ CL K
Sbjct: 779 IKLDFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNSPLVSNMINTCLQK 838
Query: 767 ILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKR 826
+L+DRD GAV Y K ISDLL NR+D+S LVITK LTK +DY K AHVEL+ +M+KR
Sbjct: 839 LLIDRDPDGAVAYAKEVISDLLCNRIDISQLVITKELTK--NDYTAKQAHVELSIKMKKR 896
Query: 827 DAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIF 886
D AP +GDR+PY++I KG+ AY+R+EDPI+VLENNIPID +YYLENQ+SKPL+RIF
Sbjct: 897 DPGNAPKLGDRIPYILITGTKGSPAYQRAEDPIFVLENNIPIDFNYYLENQLSKPLVRIF 956
Query: 887 EPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----SNGTLCSH 941
PIL + A LL GDHTR ++ T S + F K++ C+GCK+++ LC +
Sbjct: 957 SPILGDKAESVLLKGDHTRKKAMVTSKVSALSAFTKKREVCLGCKSVLPSNEEKNALCKY 1016
Query: 942 CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKD 1001
C ++ ELY + +V +L+ F RLWT+CQ CQGSLH++V+CTSRDCPIFY RKK Q D
Sbjct: 1017 CMPKQGELYYQERMKVNDLQEKFCRLWTECQRCQGSLHEEVICTSRDCPIFYLRKKVQID 1076
Query: 1002 MAEAKLQLDRW 1012
+ +DR+
Sbjct: 1077 LTAQVKTMDRF 1087
>gi|328720536|ref|XP_001948892.2| PREDICTED: DNA polymerase delta catalytic subunit-like [Acyrthosiphon
pisum]
Length = 1093
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/1098 (47%), Positives = 701/1098 (63%), Gaps = 108/1098 (9%)
Query: 9 RKRPPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPE--DEESLILRDI-EQR 65
+KRP + +KQ + DD+ + +F ++ + E D+E + +DI +
Sbjct: 4 KKRP------NLSDKQGNFSKKFKAEDDDDFQQSMFENDLAIMEEMDKELELSQDILGEG 57
Query: 66 QDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGV 125
D A W+RP + + +S+ FQQL ID IG+ + + +G I R+FG+
Sbjct: 58 PDQEDSSALWSRPAMKA-IDPVTESLAFQQLTIDNYIGEPMKGMSGAQTGIVPITRMFGI 116
Query: 126 TREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF----HQILEGRMREANRNSKVPQFVR 181
T +G+SVCC VHG+ PYFY + P+G GP+ F + ++ MR N+N +V + V
Sbjct: 117 TMDGNSVCCNVHGYSPYFYTNAPEGFGPEHCKEFKTRLNAVVLSDMR-GNQN-RVQEPVL 174
Query: 182 HIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNV 241
+E+VQK ++ Y ++ + +LKI +ALP +V + + +L++ L ++ +E+NV
Sbjct: 175 MVEIVQKINLYGYHGEELEKYLKITMALPKLVPAAKRLLEKEPVLPTFSGHNYRMFETNV 234
Query: 242 LFALRFMIDCNIVGGNWIEVPVGKY-----RKTAKTLSYCQLEFDCLYSDIISRHPEGEF 296
+ +RFM+D IVG +WIE+P G Y K S CQLE D + +I+ PEGE+
Sbjct: 235 DYDMRFMVDLKIVGCSWIELPAGSYTVRDSNSRLKGHSRCQLEVDVGWQKMIAHAPEGEW 294
Query: 297 SKMAPFRILSFDIECAGRKGHFPEPTHDP------VIQVAN------------------- 331
SK+APFRILSFDIECAGRKG FPE DP ++Q+ N
Sbjct: 295 SKVAPFRILSFDIECAGRKGIFPEADKDPVIQIANMVQIENKRLIRNVFTLNTCAPIVGS 354
Query: 332 -LVTLQGEKQPFIRNVMTLKSCAP--IVGVDVMSFETE---------------------- 366
+++ + E + ++ C P I G ++ +F+
Sbjct: 355 QVISCEKENTMLEKWAAFVRECDPDIITGYNINNFDLPYLLNRAKHLHTKNFNFLGRIKD 414
Query: 367 -----RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLI---------------------- 399
R+ +L + R + V I + FDL YL+
Sbjct: 415 IQSVIREQVLQSKQMGRRENKSVNIDGRV-PFDL-YLVLVRDYKLRSYSLNSVSYHFLQE 472
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG +TRRRLAVYCLKDA+LP +LLDKLM + NY+EMARVTGVP+
Sbjct: 473 QKEDVHHSIITDLQNGTPQTRRRLAVYCLKDAFLPLKLLDKLMCLINYMEMARVTGVPLG 532
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+ GQ KV+SQLLR A++KN ++P + G + +EGATV+E G+Y PIATLD
Sbjct: 533 SLLTGGQQAKVVSQLLRLAQEKNYIMPTMA-GGMQDEQFEGATVIEPIKGYYADPIATLD 591
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F SLYPSIMMA+NLCY+TL++ + LNL KTPSG F+ ++++KG+LPEILE
Sbjct: 592 FTSLYPSIMMAHNLCYTTLLSQKTINLLNLSENDYTKTPSGSYFLSNSIRKGLLPEILEN 651
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AK DLK DP + VLDGRQLALKISANSVYGFTGA VG+LPC+EIS+SVTS
Sbjct: 652 LLSARKKAKTDLKSETDPFKIKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISTSVTS 711
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE K+ GYEH+A VIYGDTDSVMV+FGV ++E AM+LGREAA+Y+
Sbjct: 712 YGRTMIERTKQEVEQKYCIANGYEHDAVVIYGDTDSVMVKFGVKSIEKAMELGREAAEYV 771
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ FIKPIKL+FEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDN LV N+
Sbjct: 772 TTKFIKPIKLDFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNSPLVSNM 831
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DRD GAV Y K ISDLL NR+D+S LVITK LTK +DY K AHVEL
Sbjct: 832 INTCLQKLLIDRDPDGAVAYAKEVISDLLCNRIDISQLVITKELTK--NDYTAKQAHVEL 889
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
+ +M+KRD AP +GDR+PY++I KG+ AY+R+EDPI+VLENNIPID +YYLENQ+S
Sbjct: 890 SIKMKKRDPGNAPKLGDRIPYILITGTKGSPAYQRAEDPIFVLENNIPIDFNYYLENQLS 949
Query: 880 KPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----S 934
KPL+RIF PIL + A LL GDHTR ++ T S + F K++ C+GCK+++
Sbjct: 950 KPLVRIFSPILGDKAESVLLKGDHTRKKAMVTSKVSALSAFTKKREVCLGCKSVLPTNEE 1009
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LC +C ++ ELY + +V +L+ F RLWT+CQ CQGSLH++V+CTSRDCPIFY
Sbjct: 1010 KNALCKYCMPKQGELYYQERVKVNDLQEKFCRLWTECQRCQGSLHEEVICTSRDCPIFYL 1069
Query: 995 RKKAQKDMAEAKLQLDRW 1012
RKK Q D+ +DR+
Sbjct: 1070 RKKVQIDLTAQVKTMDRF 1087
>gi|324120740|dbj|BAJ78761.1| DNA polymerase delta catalytic subunit [Bemisia tabaci]
Length = 1094
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/1064 (47%), Positives = 668/1064 (62%), Gaps = 94/1064 (8%)
Query: 38 FLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLD 97
F +E +++ T E++ + EQ + S KW+RP + I+FQQ+
Sbjct: 31 FEEELAYMEATESQENDVDMPDSQKEQGPETRSTNQKWSRPA-PPDLDPEKDGIVFQQIS 89
Query: 98 IDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS 157
+D G+ + + G I RIFG+T EG+SVC VHGF PYF+++ P G
Sbjct: 90 LDSYTGEPVKGMPGSQLGPVPIFRIFGITMEGNSVCAHVHGFSPYFFVTAPAGFNESHCR 149
Query: 158 HFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVAS 215
F L + R +K + + V +E+V+K+++ Y + + FLKI VALP ++A+
Sbjct: 150 PFKDALNRTILNDMRGNKSGIQEAVLMVEIVRKQTMFGYWGDEVKDFLKITVALPRLIAA 209
Query: 216 CRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA----K 271
+ +L++ ++ +ESN+ F +RFM+D NIVG +W+E+ G +++ +
Sbjct: 210 GKRLLEKEAVFPSFPNHAYKAFESNIDFDIRFMVDKNIVGCSWVELGKGTWQRRPHSDLR 269
Query: 272 TLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVAN 331
S CQ+E D D+IS PEGE+SK+APFRILSFDIECAGRKG FPEP HDPVIQ+AN
Sbjct: 270 VTSRCQIEVDVSCEDLISHLPEGEWSKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIAN 329
Query: 332 LVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNIC 391
+V QGE + FIRNV TLK CAPIVG V+S +TE ++L W DF+RE DPDV GYNI
Sbjct: 330 MVVQQGEPEIFIRNVFTLKECAPIVGCQVISCDTEMELLQRWSDFVRESDPDVFTGYNIN 389
Query: 392 KFDLPYLIEKE---DVHH----------------SIISDLQNGNAETRR---------RL 423
FD PYLI + +VH+ II Q G E + L
Sbjct: 390 NFDFPYLINRAKHLNVHNFSFLGRIKDTRSVIKDQIIQSKQMGRRENKNINFEGRVPFDL 449
Query: 424 AVYCLKDAYLPQRLLDKLMFIF----------NYV-EMARVTG---------------VP 457
L+D L L+ + + F N + E+ T +P
Sbjct: 450 LFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHNMITELQEGTAQTRRRLAVYCLKDAYLP 509
Query: 458 ISFL-----------LSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG----TYEG-- 500
I L ++R + + S L R + K V+ + + E+G T+ G
Sbjct: 510 IRLLEKLMCFINYMEMARVTGVPLASLLTRGQQIK--VVSQLLRKAREKGFLMPTHTGGQ 567
Query: 501 -------ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC 553
ATV+E + G+Y +PIATLDF+SLYPSIMMA+NLCY+TL+ P KLNL P+
Sbjct: 568 QDDQFEGATVIEPKKGYYNEPIATLDFSSLYPSIMMAHNLCYTTLLQPNMKDKLNLSPDM 627
Query: 554 VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKIS 613
KTP+ FVKS+++KG+LPEIL++LL ARK+AKADLK+ DP ++ VLDGRQLALKIS
Sbjct: 628 YVKTPAQNFFVKSSVRKGLLPEILDDLLTARKKAKADLKKETDPFKQKVLDGRQLALKIS 687
Query: 614 ANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDT 673
ANSVYGFTGA VG+LPC+EIS SVT+YGR MIE TK+ VE + G++++AEVIYGDT
Sbjct: 688 ANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQEVEQHYCIANGFKYDAEVIYGDT 747
Query: 674 DSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN 733
DSVMV+FG +E M LGREAA+Y++ FI PIKLEFEKVY+PYLLI+KKRYAGLY+T
Sbjct: 748 DSVMVRFGFDNLEETMNLGREAAEYVTSKFINPIKLEFEKVYFPYLLINKKRYAGLYFTR 807
Query: 734 PEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMD 793
P+K+DKMD KG+ETVRRDNC LV N++ CL K+L+DRD AV Y K ISDLL NRMD
Sbjct: 808 PDKYDKMDCKGLETVRRDNCPLVANVMNMCLQKLLIDRDQVSAVAYAKKVISDLLCNRMD 867
Query: 794 LSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYE 853
+S LVITK LTK+ DY K AHVELA++M+KRDA TAP +GDRVP+V A KG AYE
Sbjct: 868 ISQLVITKELTKS--DYAAKQAHVELAKKMKKRDAGTAPKLGDRVPFVFCAAGKGTPAYE 925
Query: 854 RSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKN-ASKELLSGDHTRSISISTPS 912
++EDPI+VLENN+PID +YYLENQ+SKPLLRIF PIL + A ELL GDHTR+ ++ T
Sbjct: 926 KAEDPIFVLENNMPIDANYYLENQLSKPLLRIFSPILGDKAESELLRGDHTRTKTVVTSK 985
Query: 913 NSGIMKFAKRQLSCIGCKAL----ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLW 968
+ F K++ +C+GC+A+ + LC HC EA Y + + + + LE F RLW
Sbjct: 986 VGALAAFTKKKETCLGCRAVLPPNLEKQALCVHCSKTEALFYQEEMYKYKHLEEKFCRLW 1045
Query: 969 TQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRW 1012
TQCQ CQ SLH++V+CTSRDCPIFY RKK Q D+ + + R+
Sbjct: 1046 TQCQRCQESLHEEVICTSRDCPIFYMRKKVQIDLGASVKAIQRF 1089
>gi|168019806|ref|XP_001762435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686513|gb|EDQ72902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1173
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/536 (83%), Positives = 491/536 (91%), Gaps = 1/536 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNGN+ETRRRLAVYCLKDAYLPQRLLDKLMF++NYVEMARVTGVPIS
Sbjct: 541 QKEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQRLLDKLMFVYNYVEMARVTGVPIS 600
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG-TYEGATVLEARAGFYEKPIATL 518
FLL+RGQSIKVLSQLLRK+KQ+N V+PNVK G+ G T+EGATVL+A+AG+Y+KPIATL
Sbjct: 601 FLLARGQSIKVLSQLLRKSKQRNFVLPNVKSQGAGGGETFEGATVLDAKAGYYDKPIATL 660
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DFASLYPSIMMAYNLCY TLV ED +K L PE V KTPSG+ FVK +L+KGILPEILE
Sbjct: 661 DFASLYPSIMMAYNLCYCTLVRAEDLQKFMLGPEEVTKTPSGDVFVKPSLEKGILPEILE 720
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARKRAKADLKEA DPLEKAVLDGRQLALK+SANSVYGFTGATVGQLPC+EISSSVT
Sbjct: 721 ELLAARKRAKADLKEATDPLEKAVLDGRQLALKVSANSVYGFTGATVGQLPCLEISSSVT 780
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMI+HTKKLV+++F T Y ++AEVIYGDTDSVMVQFG P V+ AMKLGREAA
Sbjct: 781 SFGRQMIDHTKKLVQERFNTSNSYSYDAEVIYGDTDSVMVQFGTPDVDEAMKLGREAAQQ 840
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
IS TF KPIKLEFEKVY+PYLLISKKRYAGL WT PEK+DKMDTKGIETVRRDNCLLVKN
Sbjct: 841 ISATFTKPIKLEFEKVYWPYLLISKKRYAGLLWTKPEKYDKMDTKGIETVRRDNCLLVKN 900
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+TECLHKIL+DRDIPGAVQYVK+TISDLLMNRMDLSLLVITKGLTK GD YE K AHVE
Sbjct: 901 LITECLHKILIDRDIPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKAGDAYESKTAHVE 960
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDAATAP VGDRVPYVIIKAAKGAKAYE+SEDPIYVLENNIPID YYLENQ+
Sbjct: 961 LAERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDPQYYLENQL 1020
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS 934
SKPLLRIF+PILKNASKELL G HTRS+SISTPSN GIMKFAK+++SC GC+ IS
Sbjct: 1021 SKPLLRIFDPILKNASKELLHGSHTRSVSISTPSNGGIMKFAKKRVSCAGCRTPIS 1076
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/375 (65%), Positives = 297/375 (79%), Gaps = 20/375 (5%)
Query: 40 DEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSI----MFQQ 95
DEDVFL+ETLL ++E + R A+ KW RP +SS ++ S+ +FQQ
Sbjct: 98 DEDVFLEETLLRDEEMN------ASRAAVAALFTKWRRPAISS-LDTETSSLEVLSVFQQ 150
Query: 96 LDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDD 155
L+IDYVIGDS++EL P SG AA++R+FGVT+EG+SVC VHGFEPYFYISC G+GPDD
Sbjct: 151 LEIDYVIGDSHKELCPYRSGPAAVLRMFGVTQEGNSVCGNVHGFEPYFYISCLDGIGPDD 210
Query: 156 ISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVAS 215
+ F LE RMREANRNSK F+ IE+VQKRS+MYYQ QK++ FLKIVVALPTMVA
Sbjct: 211 VPKFRSTLETRMREANRNSKTQNFITKIEIVQKRSVMYYQVQKARSFLKIVVALPTMVAG 270
Query: 216 CRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSY 275
CRGIL++GI +DG+G + F+TYESNVLFALRFMIDC+IVGGNWIE+P G Y K+ + LSY
Sbjct: 271 CRGILEKGINIDGIGQRCFLTYESNVLFALRFMIDCDIVGGNWIELPAGNYCKSTRRLSY 330
Query: 276 CQLEFD---------CLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPV 326
CQLE D YS I+S P G++SKMAPFRILSFDIECAGRKGHFPEP HDPV
Sbjct: 331 CQLELDIQYPISCQGSCYSKIVSYAPVGQYSKMAPFRILSFDIECAGRKGHFPEPEHDPV 390
Query: 327 IQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMI 386
IQ+ANLVT+QGE++P ++NVMTLKSC+PIVG DVMSF+TE++VLLAWR+ + EVDPD++I
Sbjct: 391 IQIANLVTVQGEQRPMVKNVMTLKSCSPIVGADVMSFDTEKEVLLAWRELVTEVDPDIII 450
Query: 387 GYNICKFDLPYLIEK 401
GYNICKFDLPYLIE+
Sbjct: 451 GYNICKFDLPYLIER 465
>gi|303275346|ref|XP_003056969.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461321|gb|EEH58614.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1067
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/626 (69%), Positives = 525/626 (83%), Gaps = 13/626 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS IS+LQ G +ETRRRLAVYCLKDAYLPQRLLDKLM+++NY+EMARVTGVP+S
Sbjct: 444 QKEDVHHSAISELQAGTSETRRRLAVYCLKDAYLPQRLLDKLMYMYNYIEMARVTGVPLS 503
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGS---EQG--TYEGATVLEARAGFYEKP 514
FLLSRGQSIKVLSQ+LRKA+Q+ L++P++ + G+ ++G YEGATVL+A+AG+YE P
Sbjct: 504 FLLSRGQSIKVLSQILRKARQRGLLVPHMPKKGASDQQEGGVAYEGATVLDAKAGYYELP 563
Query: 515 IATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILP 574
IATLDFASLYPSIMMA+NLCY TLV ++N PE V+K+P+G+ FVKSN KGILP
Sbjct: 564 IATLDFASLYPSIMMAHNLCYCTLVPQNMVSRMN--PEDVSKSPTGDVFVKSNKTKGILP 621
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
EILEELL+ARKRAKADLK+A+DPLEKAVLDGRQLALK+SANSVYGFTGATVG LPC+EIS
Sbjct: 622 EILEELLSARKRAKADLKKAQDPLEKAVLDGRQLALKVSANSVYGFTGATVGALPCLEIS 681
Query: 635 SSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGRE 694
+S TSYGR MI+ TK+LV +K+ T GY NA+VIYGDTDSVM++F V +E AMKLG E
Sbjct: 682 ASTTSYGRNMIDQTKELVMEKYNTKNGYSANADVIYGDTDSVMIKFNVTDLEEAMKLGEE 741
Query: 695 AADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCL 754
AA Y+S TFIKPIKLEFEKVY+PYLLISKKRYAGL WTNP+K D MDTKGIETVRRDNCL
Sbjct: 742 AATYVSSTFIKPIKLEFEKVYWPYLLISKKRYAGLLWTNPKKHDYMDTKGIETVRRDNCL 801
Query: 755 LVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA 814
LV+ ++ L KIL+ RD+PGAV YVK TISDLLMNRMDLSLLVITKGLT+ D YE KA
Sbjct: 802 LVRQVIETVLQKILISRDVPGAVDYVKRTISDLLMNRMDLSLLVITKGLTQDADAYENKA 861
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYL 874
AHVELA+RM++RD ATAP VGDR+ YVI+KAAK AK YE+SEDPI+ +E+N+PID +YL
Sbjct: 862 AHVELAKRMKERDPATAPVVGDRIAYVIVKAAKNAKGYEKSEDPIWAMEHNLPIDCQHYL 921
Query: 875 ENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GIMKFAKRQLSCIGCKAL 932
++ + KPL+RIFEPI+K+AS +LL GDHTR+IS TPS++ GIM+FAK +LSC+GCKA
Sbjct: 922 DHYLGKPLMRIFEPIMKDASSQLLKGDHTRAISQPTPSSAAGGIMRFAKVRLSCVGCKAS 981
Query: 933 ISN----GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRD 988
I++ LC+HC +E E + ++ V +LE F RLWTQCQ CQGSLHQDVLCTSRD
Sbjct: 982 ITDEKTSTALCAHCLAKEPEHLQRALNTVNDLERDFNRLWTQCQRCQGSLHQDVLCTSRD 1041
Query: 989 CPIFYRRKKAQKDMAEAKLQLDRWNF 1014
CPIFYRRKK KD+ EA+ L R+++
Sbjct: 1042 CPIFYRRKKVAKDLGEAESTLKRFDW 1067
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 169/336 (50%), Positives = 227/336 (67%), Gaps = 10/336 (2%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPL--SSGSAAIIRIFGVTREGHSV 132
W R P V + +I+FQQLDIDY+IG+ + L P + G+AA++RIFGVT G+SV
Sbjct: 34 WKRKPAPELNVEK-DNIVFQQLDIDYIIGEPHAMLGPQRKAMGAAAMLRIFGVTAGGNSV 92
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ---FVRHIEMVQ-K 188
C VHGFEPYFY P+ D F + L M++ R F+ + +V+ K
Sbjct: 93 CVHVHGFEPYFYAKVPESFRDDQCEGFRKNLNDLMQQQQRGGNNGGNGTFISAVSVVRDK 152
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDR-GIQLDGLGMK--SFMTYESNVLFAL 245
+S+MYYQ+ ++ F+KI LP MVA+ RGIL++ G+ + GL + +FMT+ESNVL+ L
Sbjct: 153 QSLMYYQEGRTAMFVKITTTLPNMVATARGILEKQGLLVPGLHVSALTFMTFESNVLYTL 212
Query: 246 RFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRIL 305
RFM+D IVGGNW+E+P G Y AK S CQ E D + +IS PEG+FSK+APFRIL
Sbjct: 213 RFMVDRGIVGGNWLELPPGGYHLRAKKSSMCQYECDVAFDAVISHAPEGQFSKLAPFRIL 272
Query: 306 SFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFET 365
S DIECAGR+GHFP+ HDPVIQ+A +VT QG+ +P I+ + TL +CAPIVG DV+SF
Sbjct: 273 SVDIECAGRRGHFPDAEHDPVIQIATMVTCQGDDKPIIKAIWTLDTCAPIVGADVLSFTD 332
Query: 366 ERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
ER++L +W F+R DPD++IGYNI FD PYLI +
Sbjct: 333 ERELLRSWGKFLRSTDPDLLIGYNIVNFDFPYLINR 368
>gi|426244098|ref|XP_004015869.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit [Ovis aries]
Length = 1198
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/939 (50%), Positives = 610/939 (64%), Gaps = 97/939 (10%)
Query: 73 AKWARP---PLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL---PLSSGSAAIIRIFGVT 126
A+W RP PL Q + ++FQQL+ID+ +G + R L P S GS I+R FGVT
Sbjct: 86 ARWLRPAPPPLDP----QTEPLIFQQLEIDHYVGPA-RPLPGAPPPSQGSVPILRAFGVT 140
Query: 127 REGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIE 184
EG SVCC +HGF PYFY P G GP+ +S + L + R K V +E
Sbjct: 141 DEGVSVCCHIHGFAPYFYTPAPPGFGPEHLSELQRELSAAISRDQRGGKELTGPAVLAVE 200
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFA 244
+ + S+ Y PFL+I +ALP ++A R +L++GI+L GLG SF YE+NV F
Sbjct: 201 LCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRLAGLGTPSFAPYEANVDFE 260
Query: 245 LRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPF 302
+RFM+D +IVG NW+E+P GKY R K + CQLE D L+SD+IS PEGE+ ++AP
Sbjct: 261 IRFMVDTDIVGCNWLELPAGKYILRPEGKA-TLCQLEADVLWSDVISHPPEGEWQRIAPL 319
Query: 303 RILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMS 362
R+LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S
Sbjct: 320 RVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQS 379
Query: 363 FETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRR 422
+E E D+L AW FIR +DPDV+ GYNI FDLPYLI + L+NGN +TRRR
Sbjct: 380 YEREEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQT-------LKNGNDQTRRR 432
Query: 423 LAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN 482
LAVYCLKDA+LP RLL++LM + N + + R
Sbjct: 433 LAVYCLKDAFLPLRLLERLMGLVNAMGVGR------------------------------ 462
Query: 483 LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE 542
G TV+E G+Y+ PIATLDF+SLYPSIMMA+NLCY+TL+ P
Sbjct: 463 -----------------GTTVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 505
Query: 543 DARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAV 602
KL L + KTP+G+ FVK++++KG+LP+ILE LL+ARKRAKA+L + DPL + V
Sbjct: 506 ADHKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLRRQV 565
Query: 603 LDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGY 662
LDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT +GRQMIE TK+LVE K+T GY
Sbjct: 566 LDGRQLALKVSANSVYGFTGAQVGRLPCLEISQSVTGFGRQMIEKTKQLVETKYTVENGY 625
Query: 663 EHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLIS 722
+A+V+YGDTDSVM +FGV +V AM LGREAAD++SG F PI+LEFEKVY+PYLLIS
Sbjct: 626 STSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYLLIS 685
Query: 723 KKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVK 781
KKRYAGL +++ P+ D+MD KG+E VRRDNC LV NLVT L ++L+DRD GAV + +
Sbjct: 686 KKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVANLVTASLRRLLIDRDPAGAVAHAQ 745
Query: 782 STISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYV 841
ISDLL NR+D+S LVITK LT+ DY K AHVELAERMRKRD +AP++GDRVPYV
Sbjct: 746 DVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVELAERMRKRDPGSAPSLGDRVPYV 805
Query: 842 IIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGD 901
II AAKG AY +SE ++ +P LR L +A + G
Sbjct: 806 IISAAKGVAAYMKSEXQAHL--------------GFALRPALR----ALTSAFQAGWEGV 847
Query: 902 HTR--SISISTPSNS---GIMKFAKRQLSCIGCKALISN-GTLCSHCKGREAELYCKTVS 955
R + ++ T NS G++ FAKR+ C+GC+ ++S+ G LC C+ RE+ELY K V
Sbjct: 848 PLRGPAGTLRTAPNSKVGGLLAFAKRRSCCVGCRTVLSHQGALCKFCQPRESELYQKEVG 907
Query: 956 Q--VQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
LE F RLWTQCQ CQGSLH+DV+CT D P F
Sbjct: 908 DRGGGPLEERFSRLWTQCQRCQGSLHEDVICTRLDGPHF 946
>gi|313225943|emb|CBY21086.1| unnamed protein product [Oikopleura dioica]
Length = 1062
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/1028 (46%), Positives = 655/1028 (63%), Gaps = 104/1028 (10%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW RP S + ++FQQ+D+D + + E P IRI+G ++G SVC
Sbjct: 45 KWGRPE-----GSMYEDLVFQQIDLDKYVEFVDGEPKP-------TIRIYGTDKKGSSVC 92
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS---KVPQFVRHIEMVQKRS 190
V GF+PYFY P G D F + L R+ A R + + V H EM K +
Sbjct: 93 LFVKGFQPYFYTPAPNGFSEDYCGQFVRELNERVLGAMRGGMLKGISKAVLHAEMCSKEN 152
Query: 191 IMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQL---DGLGMKSFMTYESNVLFALRF 247
I Y + PF+K+ VA ++ C+ +++ G ++ +G +F YES++ + +RF
Sbjct: 153 IYGYNSKGKIPFIKVTVASWQVMTPCKNVMEPGWKVTTDNGQFHHNFSMYESHIDYEVRF 212
Query: 248 MIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
M+DC + G +WI VP G++ + + + C +E + Y+DII PEGE++ +AP RI S+
Sbjct: 213 MVDCKVRGASWITVPKGQFHERMRKETTCSIEAEVDYADIIPHEPEGEWADIAPMRIFSY 272
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV----------- 356
DIECAGRKG FPE HDPVIQ+A +V QG+ PF+R + TL SC+PIV
Sbjct: 273 DIECAGRKGVFPEAEHDPVIQIACMVQNQGDPSPFVRMIFTLNSCSPIVGNHVFCYEKEI 332
Query: 357 -------------------GVDVMSFET----ERDVLLAWRDF----------------- 376
G ++M+F+T R L ++F
Sbjct: 333 DMLEGFAELMRLVDPDIITGYNIMNFDTSYLVNRANTLKSQNFGYLGRIRSNLSKVKDAK 392
Query: 377 -------IRE---------VDPDVMIG---------YNICKFDLPYLIE-KEDVHHSIIS 410
RE + DVM+ YN+ +L E KEDVHHSIIS
Sbjct: 393 FSSKQMGTREYKEVNIDGRIQLDVMVSIVQNYKLRSYNLNAVSYHFLKEQKEDVHHSIIS 452
Query: 411 DLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKV 470
DLQ G RRRLAVYCLKDA LP RL+DKLMF+ N +EMARVTG+P+S+LL+RGQS+KV
Sbjct: 453 DLQAGTDSDRRRLAVYCLKDALLPLRLMDKLMFVVNTMEMARVTGIPLSYLLTRGQSVKV 512
Query: 471 LSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMA 530
++QLLR++ ++LV+P +K S+Q YEGATV++ G+Y++PI TLDFASLYPSIM A
Sbjct: 513 MAQLLRESSIRDLVMPVLKTEQSDQ--YEGATVIDPIRGYYKEPITTLDFASLYPSIMRA 570
Query: 531 YNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKAD 590
+NLCY+TL++ ++ R L KTP+G+ FVK +++G+LP IL+ LL AR +AK +
Sbjct: 571 HNLCYTTLLSNKNERS-KLDTSQFIKTPTGDEFVKPEVREGLLPLILKNLLEARGKAKKE 629
Query: 591 LKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKK 650
LK + P +K VLDGRQLALKISANSVYGFTGA VG+LPC+ IS SVT++GR MIE T K
Sbjct: 630 LKIEQCPFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCLPISGSVTAFGRLMIEQTMK 689
Query: 651 LVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLE 710
VE+ +T G+EH+A+V+YGDTDSVM++FG ++ + +LG EAA +++ FI PIKLE
Sbjct: 690 TVEEHYTRANGFEHDAKVVYGDTDSVMIKFGTSSIAKSFELGAEAAKFVTSQFINPIKLE 749
Query: 711 FEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILV 769
FEKVY PYLLI+KKRYAGLY+ +NP+K DKMD KGIETVRRDNC L L+++CL +L+
Sbjct: 750 FEKVYCPYLLINKKRYAGLYYSSNPDKHDKMDCKGIETVRRDNCRLASELISKCLDMMLI 809
Query: 770 DRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAA 829
+RD GA+ Y K TI DLL+NR+D+S LVITK LT+ ++Y K AH ELAERMRKRD
Sbjct: 810 NRDPDGAIDYAKDTIRDLLLNRVDISKLVITKELTQKAENYANKQAHCELAERMRKRDPG 869
Query: 830 TAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPI 889
+AP +GDRVPYV IK K AYE++EDP+YVL+N++PID +YL + + PLLRIFEP+
Sbjct: 870 SAPQLGDRVPYVFIKKPKNTPAYEKAEDPLYVLDNSVPIDAEHYLHHSLENPLLRIFEPV 929
Query: 890 L--KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN---GTLCSHCKG 944
L A L GDHTR +++T G+ KF +++ +C+GCKA + G +C CK
Sbjct: 930 LGETKAKSVLFKGDHTRVKAVTTSKVGGLFKFTQKRETCMGCKAAMPKGVEGNICPSCKE 989
Query: 945 REAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAE 1004
E ELY +++ +L + F +LW+QCQ CQ + ++VLC++ DCPIFYRRKK + D+ +
Sbjct: 990 NEIELYLSQKAELDDLRIDFNKLWSQCQRCQKHMQKEVLCSNCDCPIFYRRKKIRSDLVK 1049
Query: 1005 AKLQLDRW 1012
A+ L ++
Sbjct: 1050 AENLLAKF 1057
>gi|412988964|emb|CCO15555.1| DNA polymerase delta catalytic subunit [Bathycoccus prasinos]
Length = 1114
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/629 (69%), Positives = 518/629 (82%), Gaps = 16/629 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS IS+LQ G AETRRRLAVYCLKDAYLPQRLLDKLM+ +NY+EM+RVTGVP+S
Sbjct: 488 QKEDVHHSAISELQAGTAETRRRLAVYCLKDAYLPQRLLDKLMYTYNYIEMSRVTGVPLS 547
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSE-------QGTYEGATVLEARAGFYE 512
FLL+RGQSIKV+SQLLRKA+Q+ L+IP + G+ + YEGATVL+A+AG+YE
Sbjct: 548 FLLARGQSIKVMSQLLRKARQRGLIIPARRDRGNGPNAQLEGEVAYEGATVLDAKAGYYE 607
Query: 513 KPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGI 572
PIATLDFASLYPSIMMA+NLCY TLV D +LPPE K P+G+ FVKS KGI
Sbjct: 608 LPIATLDFASLYPSIMMAHNLCYCTLVKQHDV--ADLPPEAYTKAPTGDVFVKSTQFKGI 665
Query: 573 LPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIE 632
LPEILEELL+ARKRAK DLK+A DPLE+AVLDGRQLALKISANSVYGFTGATVGQLPC+E
Sbjct: 666 LPEILEELLSARKRAKQDLKKATDPLERAVLDGRQLALKISANSVYGFTGATVGQLPCLE 725
Query: 633 ISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLG 692
IS+S T+YGRQMI+HTKKLVE+K+TT GYE +AEVIYGDTDSVM++F ++ +M+ G
Sbjct: 726 ISASTTAYGRQMIDHTKKLVEEKYTTANGYEGDAEVIYGDTDSVMIKFNCKELKTSMEYG 785
Query: 693 REAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDN 752
EAADY+S TF KPIKLEFEK Y+PYLLISKKRYAGL W N EK+ KMDTKGIETVRRDN
Sbjct: 786 LEAADYVSATFTKPIKLEFEKCYWPYLLISKKRYAGLLWENSEKWTKMDTKGIETVRRDN 845
Query: 753 CLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEV 812
CLLV+ +V CL KIL+DRDIPGAV+YV++TISDLLMN++DLSLLVITKGLTKT D+Y V
Sbjct: 846 CLLVRQVVETCLTKILMDRDIPGAVKYVQNTISDLLMNKLDLSLLVITKGLTKTADEYAV 905
Query: 813 KAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHY 872
KAAH ELA+RM RD ATAP VGDRV YV+IKA K AK YE+SE PIY ++NN+PID +
Sbjct: 906 KAAHAELAQRMFLRDPATAPVVGDRVAYVMIKATKNAKGYEKSECPIYAMDNNLPIDHKH 965
Query: 873 YLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS---GIMKFAKRQLSCIGC 929
YL+N ++KPLLR+FEPIL+NA+ LLSG+HTRSI++ TPS++ GIM+FAK + SC+GC
Sbjct: 966 YLDNFLTKPLLRLFEPILQNAASVLLSGEHTRSIALPTPSSTLAGGIMRFAKVRPSCVGC 1025
Query: 930 KALISN----GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCT 985
+A I++ +LC HC E++ K + V ELE F RLWTQCQ CQGSLHQDVLCT
Sbjct: 1026 RAPITDEKLSKSLCKHCVEDESKHLQKALVTVNELEKDFNRLWTQCQRCQGSLHQDVLCT 1085
Query: 986 SRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
SRDCPIFYRR+K QKD+ EA L R+++
Sbjct: 1086 SRDCPIFYRRRKTQKDLIEATTTLKRFDW 1114
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/389 (44%), Positives = 238/389 (61%), Gaps = 27/389 (6%)
Query: 25 QATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGY 84
Q T P + ++E L+E+V++ + D+ ++ + E++ W R PL+
Sbjct: 39 QETHPWSA--NEEILEEEVYVQDLGKVSDDVKVV--EAEKKS--------WNRKPLARPI 86
Query: 85 VSQCQSIMFQQLDIDYVIGDSNRELLP--LSSGSAAIIRIFGVTREGHSVCCKVHGFEPY 142
Q SI+FQQLDIDY+IG + L S G AAI+R+FGVT +GHSVC VHGF PY
Sbjct: 87 DGQTDSILFQQLDIDYIIGQPHEMLGQERRSKGQAAILRMFGVTEDGHSVCVHVHGFNPY 146
Query: 143 FYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEM-----VQKRSIMYYQ-Q 196
FY + P+ I F L +M R+S RH + + K+S+M +Q
Sbjct: 147 FYCAVPETFTEQHIPAFLMSLNSQMMAHQRSSNS---ARHFALDAHLILDKQSLMNFQPN 203
Query: 197 QKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK--SFMTYESNVLFALRFMIDCNIV 254
K FL+I++ LPT VA RGIL+ GI +D L +F T+ESN+L+ LRFM+D +V
Sbjct: 204 GKKGRFLRIIMMLPTQVAQARGILENGIHVDELHQSALTFPTFESNILYTLRFMVDRAVV 263
Query: 255 GGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECA 312
GGNW+E+P YR + SYCQ+E D ++ IS EG++SK+APFRILS DIECA
Sbjct: 264 GGNWLELPAKNYRVRPQQRKASYCQIECDVMFDRFISHAAEGKYSKLAPFRILSVDIECA 323
Query: 313 GRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLA 372
GRKG FP+ DPVIQ+A LVT QG P I+ + TL +CAPIVG +V SF ER++L
Sbjct: 324 GRKGFFPDAEQDPVIQIATLVTEQGSDSPIIKAIWTLDTCAPIVGAEVKSFRDERELLRD 383
Query: 373 WRDFIREVDPDVMIGYNICKFDLPYLIEK 401
W F+R VDPD++IGYNI FD PYLI++
Sbjct: 384 WGKFMRAVDPDMLIGYNIVNFDFPYLIKR 412
>gi|339245491|ref|XP_003378671.1| DNA polymerase delta catalytic subunit [Trichinella spiralis]
gi|316972406|gb|EFV56084.1| DNA polymerase delta catalytic subunit [Trichinella spiralis]
Length = 1069
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/1040 (47%), Positives = 641/1040 (61%), Gaps = 139/1040 (13%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
A+WARP L S + S++FQ +DIDY D L + A+IR++G T++GHSV
Sbjct: 66 ARWARPRLLSDIAER--SVIFQCMDIDYYHSDMQNGLK--TDQVHAVIRMYGATKDGHSV 121
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQIL-EGRMREANRNSKVPQFVRHIEMVQKRSI 191
CC VHGF+PYFY+ + P S F L + ++E N + + + +E++Q R++
Sbjct: 122 CCHVHGFQPYFYVQI-ENFDPARASLFCDSLNQAVVQEMRTNKDIKKPILDVEILQGRNL 180
Query: 192 MYYQQQKSQPFLKIVVALPTMV---------------ASCRGILDRGIQLDG------LG 230
Y KS F+KI+VALP +V R L R I G
Sbjct: 181 YGYNLMKSTTFVKIIVALPKIVPIKFVNFYIFLILKCEKTRWFLARRILETGGWSCASQP 240
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEV-PVGKYRKTAKTLSYCQLEFDCLYSDIIS 289
+ + +T+ESN+ F +RFMID ++ G WIE+ P ++ K +S CQ+E D + ++
Sbjct: 241 INALLTFESNIDFTIRFMIDTSMTGCCWIELKPSAFTVRSLKKMSRCQIEVDIDWKKLVI 300
Query: 290 RHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTL 349
PEG++S +AP RILS DIECAGRKG FPE DPVIQ+AN+V QGEK+PF+RNV TL
Sbjct: 301 HSPEGDWSDIAPLRILSIDIECAGRKGVFPEAEKDPVIQIANMVLTQGEKEPFVRNVFTL 360
Query: 350 KSCAPIV------------------GVDVMSFE----TERDVLLAWRDFI---REVDPDV 384
SCAPIV G ++ +F+ +R L+ +DF R D
Sbjct: 361 NSCAPIVGCQEWASFVREVDPDIITGYNIQNFDLPYLIDRAQTLSVKDFAFIGRIKDQKT 420
Query: 385 MIGYN-------------IC------KFDLPYLI---------------------EKEDV 404
++ + +C +FDL ++ +KEDV
Sbjct: 421 VVHSSNVQSRQMGRRENKLCNIEGRIQFDLLQILFRDYKLRSYTLNAVSFHFLQEQKEDV 480
Query: 405 HHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSR 464
H+SII+DLQNGN +TRRRLAVYCLKDAYLP RLLDKLM ++ S
Sbjct: 481 HYSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLDKLM------SSDGCHCEQFAYSWST 534
Query: 465 GQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLY 524
QS + +++NL +P V+ E Y GATV+E G+Y KPI TLDFASLY
Sbjct: 535 DQSYFTTDAQGSQTREQNLFLPAVRSEVGED--YTGATVIEPIKGYYNKPIVTLDFASLY 592
Query: 525 PSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAAR 584
PSIMMA+NLCY+TL+ E R L PE KTPSG FVK + KG+LPEILE LLAAR
Sbjct: 593 PSIMMAHNLCYTTLIMQETVRS-QLSPEDYIKTPSGHYFVKKDKCKGLLPEILENLLAAR 651
Query: 585 KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQM 644
K K +K D + VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT++GR M
Sbjct: 652 KAVKQQMKVETDAFRRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTAFGRMM 711
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
I+ TK+ VE +F GY +A+VIYGDTDSVMV FG+ T+E AM++GREAA ++S F+
Sbjct: 712 IDKTKEEVEKQFVKANGYSADAKVIYGDTDSVMVDFGLDTLEKAMEMGREAAAFVSAKFV 771
Query: 705 KPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
PIKLEFEKVY+PYLLISKKRYAGLY+TN + +DKMD KGIETVRRDNC LV N++ CL
Sbjct: 772 NPIKLEFEKVYFPYLLISKKRYAGLYFTNTQSYDKMDCKGIETVRRDNCPLVANVLNTCL 831
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMR 824
KIL+DRD AV+Y K +Y K AHVELA RMR
Sbjct: 832 EKILIDRDPNKAVEYTKM--------------------------EYAAKQAHVELAARMR 865
Query: 825 KRDAATAPNVGDRVPYVIIKAAKGAKAYERSE---------DPIYVLENNIPIDTHYYLE 875
KRD +AP++GDRVPYVII A+KG AY ++E DPIYVLEN+IPIDT YYLE
Sbjct: 866 KRDPGSAPHLGDRVPYVIIAASKGTAAYMKAEVSSIFHTSKDPIYVLENSIPIDTQYYLE 925
Query: 876 NQISKPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS 934
NQ+SKPLLRIF+PIL + ++ LL GDHTR+ +++ G+M F K+Q +C+ C+A++S
Sbjct: 926 NQLSKPLLRIFDPILGDKAESILLRGDHTRTKTVTHSKLGGLMAFTKKQETCLNCRAVLS 985
Query: 935 -NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
NG +C HCK +E E+Y + + QVQ LE F RLWT+CQ CQGSLH++VLC+SRDCPIFY
Sbjct: 986 NNGAICDHCKPKEVEIYQRELFQVQYLEERFSRLWTECQRCQGSLHEEVLCSSRDCPIFY 1045
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
R K +KD+ + ++ R++
Sbjct: 1046 MRTKVKKDLQDNWKRMQRFD 1065
>gi|255077772|ref|XP_002502470.1| predicted protein [Micromonas sp. RCC299]
gi|226517735|gb|ACO63728.1| predicted protein [Micromonas sp. RCC299]
Length = 1147
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/628 (68%), Positives = 523/628 (83%), Gaps = 15/628 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS IS+LQ G AETRRRLAVYCLKDAYLPQRLLDKLM+++NY+EMARVTGVP+S
Sbjct: 522 QKEDVHHSAISELQAGTAETRRRLAVYCLKDAYLPQRLLDKLMYMYNYIEMARVTGVPLS 581
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV-KQAGSEQG----TYEGATVLEARAGFYEKP 514
FLL+RGQSIKVLSQ+LRKAKQ+ L++P++ K+ G EQ YEGATVL+A+AG+YE P
Sbjct: 582 FLLARGQSIKVLSQILRKAKQRGLLVPHIAKKGGGEQADGGVAYEGATVLDAKAGYYEMP 641
Query: 515 IATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILP 574
+ATLDFASLYPSIMMA+NLCYSTLV P D R + E V +TP G+TFVKS+ +KGILP
Sbjct: 642 VATLDFASLYPSIMMAHNLCYSTLV-PRD-RVQFMASEDVTRTPCGDTFVKSHKEKGILP 699
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
EIL ELL+ARKRAKADLK+A+DPLEKAVLDGRQLALK+SANSVYGFTGATVGQLPC+EIS
Sbjct: 700 EILTELLSARKRAKADLKKAQDPLEKAVLDGRQLALKVSANSVYGFTGATVGQLPCLEIS 759
Query: 635 SSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGRE 694
SS T++GR+MI+HTK +VE ++TT GY+ NA+VIYGDTDSVM++F VP +E AMKLG E
Sbjct: 760 SSTTAFGREMIDHTKAMVEKRYTTANGYKANADVIYGDTDSVMIKFNVPELEDAMKLGEE 819
Query: 695 AADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCL 754
AA+Y+S TFIKPIKLEFEKVY+PYLLISKKRYAGL WT EK+D MDTKGIETVRRDNCL
Sbjct: 820 AAEYVSATFIKPIKLEFEKVYFPYLLISKKRYAGLLWTKTEKYDYMDTKGIETVRRDNCL 879
Query: 755 LVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA 814
+V+ ++ CL KIL+ R+ GA+ YVK+TISDLLMN++D+SLLVITK L++ ++Y V A
Sbjct: 880 MVRQVIETCLEKILIHRNPKGAISYVKNTISDLLMNKLDMSLLVITKSLSQAPENYAVNA 939
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYL 874
HVELA++M RD TAP VGDRV YV+IK K AK+YE+SEDPIY ++NNIPID+H+YL
Sbjct: 940 PHVELAKKMAVRDPVTAPVVGDRVAYVMIKGPKNAKSYEKSEDPIYAMDNNIPIDSHHYL 999
Query: 875 ENQISKPLLRIFEPIL--KNASKELLSGDHTRSISISTPS--NSGIMKFAKRQLSCIGCK 930
E+ ++KPLLRIFEPI+ + A ELL GDHTR+I++ TP+ GIM FAK +LSC+GC+
Sbjct: 1000 EHFLAKPLLRIFEPIMGAEKAESELLKGDHTRTIAVPTPTAKAGGIMAFAKVRLSCVGCR 1059
Query: 931 ALISN----GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTS 986
+ I++ LC+HC G+E E K ++ V LE F RLWTQCQ CQGSLHQDVLCTS
Sbjct: 1060 SSITDEKQSTALCTHCLGKEPEHLQKALNSVNALERDFNRLWTQCQRCQGSLHQDVLCTS 1119
Query: 987 RDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
RDCPIFYRRKK QKD+ +A+ L R+++
Sbjct: 1120 RDCPIFYRRKKVQKDLMDAENTLKRFDW 1147
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/339 (48%), Positives = 224/339 (66%), Gaps = 11/339 (3%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP--LSSGSAAIIRIFGVTREGHSV 132
W R P + S+ ++ FQQLDIDYVIG+ + L P + G +A +RIFGVT G+SV
Sbjct: 111 WKRKPAPTLDASK-DNLCFQQLDIDYVIGEPHAMLGPDRKAQGDSARLRIFGVTAGGNSV 169
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKV---PQFVRHIEMVQ-K 188
C VHGFEPYFY P + F L G M R F+ +E+V+ K
Sbjct: 170 CVHVHGFEPYFYAKVPDAFKDEMCEPFRVSLNGAMAANQRGGNQRGNGTFIGSVEIVRDK 229
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDR-GIQLDGLGMKS--FMTYESNVLFAL 245
+S+MY+Q+ K+ F+K+ LP MVA+ RGI+++ G+ + GL S F T+ESNVL+ L
Sbjct: 230 QSLMYFQEGKTSTFVKVTTTLPNMVATARGIIEKQGVTVPGLHHTSLTFQTFESNVLYTL 289
Query: 246 RFMIDCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
RFM+D +VGGNW+E+P G Y + ++ S CQ E D + ++S PEG++SK+APFRI
Sbjct: 290 RFMVDRGVVGGNWVELPAGGYTIRESQKQSMCQYECDVKFDKVVSHPPEGQYSKLAPFRI 349
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LS DIECAGRKGHFP+ HDPVIQ+A +VT QG+ +P I+ + TL +CAPIVG DV+SF+
Sbjct: 350 LSVDIECAGRKGHFPDADHDPVIQIATMVTCQGDDRPIIKAIWTLDTCAPIVGADVLSFK 409
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
ER++L +W F+R DPD++IGYNI FD PYLI + +
Sbjct: 410 DERELLRSWGKFLRSTDPDLLIGYNIVNFDFPYLINRAE 448
>gi|307110156|gb|EFN58392.1| DNA polymerase delta subunit [Chlorella variabilis]
Length = 1011
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/619 (68%), Positives = 516/619 (83%), Gaps = 9/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS IS LQ+GNAE+RRRLA+YCLKDAYLPQRL+DKLM+++NYVEMARVTGVP+S
Sbjct: 393 QKEDVHHSDISKLQDGNAESRRRLAIYCLKDAYLPQRLVDKLMYMYNYVEMARVTGVPMS 452
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAG--SEQGTYEGATVLEARAGFYEKPIAT 517
+LLSRGQSIKV SQ+LRK++ KNLV+PN+K+ G +E YEGATVLE +AG+Y+KP+AT
Sbjct: 453 YLLSRGQSIKVFSQILRKSRTKNLVVPNMKRGGDPNEGVAYEGATVLEPKAGYYDKPVAT 512
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
LDFASLYPSIMMA+NLCY+TLV P+ + P E + +P+G+TFVKS+L G+LPEIL
Sbjct: 513 LDFASLYPSIMMAHNLCYTTLV-PKGHENM-FPKEHLTISPNGDTFVKSSLATGVLPEIL 570
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
+ELLAARKRA+ D+ EA DP +AV +GRQ+ALK+SANSVYGFTGATVG LPC+EISSSV
Sbjct: 571 QELLAARKRARKDMGEATDPFLRAVFNGRQMALKVSANSVYGFTGATVGALPCLEISSSV 630
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TS+GR+MI T++ V +K+ GY H+A+VIYGDTDSVMV FGV AAM+LG EAA+
Sbjct: 631 TSFGREMIMETRRRVMEKYNRANGYTHDADVIYGDTDSVMVYFGVDDTAAAMQLGLEAAE 690
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
+S FIKPIKLEFEKVY PYLLISKKRYAGL WT PEK+DK+DTKGIETVRRDNCLLV+
Sbjct: 691 EVSKAFIKPIKLEFEKVYNPYLLISKKRYAGLLWTKPEKWDKIDTKGIETVRRDNCLLVR 750
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
N+VT CL KILV+R A YVK ISDLLMN++DLSLLVI+KGLT+ DDYE KAAHV
Sbjct: 751 NVVTTCLEKILVERAPGEACDYVKGVISDLLMNKLDLSLLVISKGLTQDADDYENKAAHV 810
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA++M+KRD ATAP VGDRVPYVI+KAAKGAKAYE++EDPIY L NN+PID +YL++
Sbjct: 811 ELAKKMKKRDLATAPAVGDRVPYVIVKAAKGAKAYEKAEDPIYALRNNLPIDCQHYLDHH 870
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPS--NSGIMKFAKRQLSCIGCKALI-- 933
+++PL+R+FEPI+KN KELL+G HTRSI ++TPS + GIMKFA+++L+C+GC+A +
Sbjct: 871 LAQPLMRLFEPIMKN-PKELLTGAHTRSIMVTTPSVASGGIMKFAQKRLTCLGCRAPLGK 929
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
S T+C HCK +E E+Y +TV V +LE F LWTQCQ CQGSLHQDVLC SRDCPIFY
Sbjct: 930 SEQTVCKHCKDKEGEVYQRTVLGVNDLEAQFSALWTQCQRCQGSLHQDVLCRSRDCPIFY 989
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
RR K QK++ EA+ L R+
Sbjct: 990 RRMKVQKELGEAQATLQRF 1008
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/322 (51%), Positives = 222/322 (68%), Gaps = 11/322 (3%)
Query: 91 IMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQG 150
++FQQL++DY G + P ++R+FGVT G+SV VHGFEPYFY+ P
Sbjct: 2 LVFQQLEVDYTFGAPHPVYYPTDLKEVPVVRMFGVTEAGNSVAAFVHGFEPYFYVDAPSA 61
Query: 151 -MGPDDISHFHQILEGRM--REANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVV 207
PDD L + R+ +RN P+ +E+ +K+++MYYQ Q S+ FLKIV+
Sbjct: 62 AFSPDDCQALAAELNALLAGRDKSRN---PRQCLRVELARKQTMMYYQPQPSRLFLKIVL 118
Query: 208 ALPTMVASCRGILDRGIQLDGLGMKSF---MTYESNVLFALRFMIDCNIVGGNWIEVPVG 264
++PT+V +C+ + + GI L +G + TYESNVL+ALRFMIDC++VGGNW+E+P G
Sbjct: 119 SVPTLVTTCKKLFEEGISLKWMGNGKYYRSTTYESNVLYALRFMIDCSVVGGNWVELPAG 178
Query: 265 KYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPT 322
Y A ++CQLE YS+++S PEGE++KMAPFRILS DIEC GRKGHFPEP
Sbjct: 179 SYMLVAPQGHQTHCQLEAHLNYSELVSHAPEGEWAKMAPFRILSVDIECQGRKGHFPEPE 238
Query: 323 HDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDP 382
HDPVIQ+A+LVT G+KQP +RN+MTLKSCAPI G +VMSF+ E+ +LL WRD + E DP
Sbjct: 239 HDPVIQIASLVTEFGKKQPAVRNIMTLKSCAPITGAEVMSFDDEKALLLRWRDLVLEADP 298
Query: 383 DVMIGYNICKFDLPYLIEKEDV 404
D++IGYNI FDLPYL+ + D
Sbjct: 299 DIIIGYNIVNFDLPYLLNRADT 320
>gi|81157941|dbj|BAE48221.1| DNA polymerase delta subunit [Chlorella pyrenoidosa]
Length = 1087
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/620 (66%), Positives = 513/620 (82%), Gaps = 9/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS IS LQ+GNAE+RRRLA+YCLKDAYLPQRL+DKLM ++NYVEMARVTGVP+S
Sbjct: 469 QKEDVHHSDISKLQDGNAESRRRLAIYCLKDAYLPQRLVDKLMLMYNYVEMARVTGVPMS 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAG--SEQGTYEGATVLEARAGFYEKPIAT 517
+LL+RGQSIKV SQ+LRK++ K LV+PN+K+ G E YEGATVLE RAG+Y++P+AT
Sbjct: 529 YLLARGQSIKVFSQILRKSRTKGLVVPNMKRGGDAGEGVAYEGATVLEPRAGYYDRPVAT 588
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
LDFASLYPSIMMA+NLCY+TL+ P+ K+ P E + TP+ + FVK +L G+LPEIL
Sbjct: 589 LDFASLYPSIMMAHNLCYTTLL-PKGQEKM-FPSEHLTFTPNNDVFVKPSLAMGVLPEIL 646
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
+ELL ARKRAK D++ A DP +AV +GRQLALK+SANSVYGFTGATVG LPC+EISSSV
Sbjct: 647 QELLTARKRAKKDMETATDPFLRAVYNGRQLALKVSANSVYGFTGATVGALPCLEISSSV 706
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TS+GR+MI T++ V++++ GY H+AEVIYGDTDSVMV FGV V AAM+LG EAA
Sbjct: 707 TSFGREMIMETRRRVQERYCKANGYSHDAEVIYGDTDSVMVYFGVDDVAAAMQLGLEAAA 766
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
+S FIKPIKLEFEKVY PYLLISKKRYAGL WT PEK+DK+DTKGIETVRRDNCLLV+
Sbjct: 767 EVSKAFIKPIKLEFEKVYNPYLLISKKRYAGLLWTKPEKWDKIDTKGIETVRRDNCLLVR 826
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
N+VT CL KILV+R+ A +YVK ISDLLMN++DLSLLVI+KGLT+ D+Y+ KAAHV
Sbjct: 827 NVVTTCLEKILVERNPGEACEYVKGVISDLLMNKLDLSLLVISKGLTQNADEYDTKAAHV 886
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA++M+KRD ATAP VGDRVPYVI+KAAKGAKAYE++EDPIY L NN+PID +YLE+
Sbjct: 887 ELAKKMKKRDPATAPAVGDRVPYVIVKAAKGAKAYEKAEDPIYALRNNLPIDCQHYLEHH 946
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPS--NSGIMKFAKRQLSCIGCKALISN 935
+ KPL+R+FEPI+KN ++LL+G HTRSI ++TPS + GIMKFA+++L+C+GCKA +
Sbjct: 947 LEKPLMRLFEPIMKN-PRDLLTGAHTRSIMVATPSAASGGIMKFAQKRLTCLGCKAPLGK 1005
Query: 936 G--TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G T+C HCK +E E+Y +++ V +L+ F LWTQCQ CQGSLHQDVLC SRDCPIFY
Sbjct: 1006 GEATVCKHCKAKEGEIYQRSLLGVNDLQAQFSALWTQCQRCQGSLHQDVLCASRDCPIFY 1065
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
RR K QK++ EA+ L R++
Sbjct: 1066 RRMKVQKELGEAQATLQRFD 1085
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/419 (43%), Positives = 246/419 (58%), Gaps = 38/419 (9%)
Query: 1 MNRSNGSARKRPPPTPKESWPNKQQATTPTTPVI--------DDEFLDE--DVFLDETLL 50
MN + GS KRP + P K+ A + DDEF DE D+ +DE L
Sbjct: 1 MNPAAGS--KRPASGEGQQVPRKRPAAEDDDMMEEDLDLEPPDDEF-DEGPDIEVDEGTL 57
Query: 51 PEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL 110
E ++ Q P S+ S++FQQL++DY + +
Sbjct: 58 GEAGKNWPRPPPPQLN------------PAST-------SLVFQQLEVDYAMQGPHPVYH 98
Query: 111 PLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQ-GMGPDDISHFHQILEGRMRE 169
P ++R++GVT G SV VHGFEPYFY+ P PDD L +
Sbjct: 99 PTDLKEVPVVRMYGVTEGGSSVAAFVHGFEPYFYVEAPSPSFTPDDCQALAAELNAHLSS 158
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL 229
+R Q +R +++ +K+++M+YQ QK + FL+IV+A P +VA CR + + GI L L
Sbjct: 159 KDRTKNARQCLR-VQLARKQTMMHYQPQKDRLFLRIVLAGPNLVAPCRSLFEAGISLKWL 217
Query: 230 GMKSF--MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA--KTLSYCQLEFDCLYS 285
+ F TYESNVL+ALRFMIDC +VGGNW+E+P G Y + ++CQLE +S
Sbjct: 218 NGQWFRSTTYESNVLYALRFMIDCGVVGGNWVELPPGSYTLVSPQSKQTHCQLEAHLHFS 277
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRN 345
++S EGE++KMAPFRILS DIEC GRKGHFPEP DPVIQVA+LVT G+ P +RN
Sbjct: 278 KLVSHPAEGEWAKMAPFRILSVDIECQGRKGHFPEPDKDPVIQVASLVTEFGKATPTVRN 337
Query: 346 VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
+MTLKSCAPI G +VMSFE E+D+LL WRD + E DPD++IGYNI FDLPYL+ + D
Sbjct: 338 IMTLKSCAPISGAEVMSFEHEKDLLLRWRDLVLETDPDIIIGYNIVNFDLPYLLNRADT 396
>gi|403333149|gb|EJY65649.1| DNA polymerase [Oxytricha trifallax]
Length = 1272
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/1010 (45%), Positives = 636/1010 (62%), Gaps = 89/1010 (8%)
Query: 77 RPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGS-AAIIRIFGVTREGHSVCCK 135
RPP+ + Q MF LDID+ I R + + + IIR++GV +G+S+
Sbjct: 275 RPPVKT-INPQTDDFMFMCLDIDFYIDKPPRNIKGTDPDTESTIIRLYGVNNDGNSIVLH 333
Query: 136 VHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANR--NSKVP--QFVRHIEMVQKRSI 191
VH F+PYF+I +S+ I + + E R NSK+P Q V +E+++++SI
Sbjct: 334 VHNFKPYFFIQ---------LSYNQYIDQSHLPELKRFLNSKLPNSQGVVDLELMERQSI 384
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y K Q F+K+ LP V + R +++G+Q +G+ + T+ESN+ ALRFMID
Sbjct: 385 QNYND-KVQKFVKVYTILPKYVNTLRSFVEKGLQFNGVSFWT-TTFESNLPHALRFMIDN 442
Query: 252 NIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIIS--RHPEGEFSKMAPFRILSF 307
IVG +WI++ G Y R K + CQ+E D + + EGEF ++AP RILSF
Sbjct: 443 QIVGMSWIKMEKGSYALRNAKKFKTVCQIELDVSNCKTMKCFKSCEGEFGRIAPLRILSF 502
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIEC KG FP D +IQ+AN+ + GE +PFIRNV TLK+CAPIVG V SF E
Sbjct: 503 DIECQAEKGKFPSHERDQIIQIANICQITGEAEPFIRNVFTLKNCAPIVGTKVFSFSKES 562
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV-------HHSIISDL---QNGNA 417
D+L AWR+F+R +DPD++ GYNI FDLPY+I + + S I D +
Sbjct: 563 DLLHAWREFVRVLDPDILTGYNIVNFDLPYIIGRAEALKLADYPKFSRIKDTFTKVKDST 622
Query: 418 ETRRRLAVYCLKDAYLPQRL-LDKLMFIFNYVEMA--RVTGVPISFLLSRGQSIK--VLS 472
T + L KD + R+ D L +I ++ + V FL + + ++ ++S
Sbjct: 623 FTSKTLGTRETKDINIDGRIQFDMLQYIIREFKLRSYSLNSVSAKFLGEQKEDVQHTIIS 682
Query: 473 QL-----------------------------------------LRKAKQKNLVIPNVKQA 491
+L RK+++ +IP K +
Sbjct: 683 ELQNQNEFTRRRLAIYCIKDAYLPLRLMWKLECLFHMTEISRLYRKSQELGYLIPTDK-S 741
Query: 492 GSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPP 551
+ G YEGA V+E GFY+ P+A LDFASLYPSIMMA+NLCYSTLV P + +++
Sbjct: 742 NIQDGKYEGAVVIEPIRGFYQDPVAILDFASLYPSIMMAHNLCYSTLVPPYKLKDIDV-- 799
Query: 552 ECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALK 611
+TP+G+ FVK +++KG+LP ILEEL+ AR+R K++L+ DP E +LD RQ ALK
Sbjct: 800 SMYERTPNGDYFVKKSVKKGVLPIILEELIQARRRVKSELQRTTDPYEIKILDSRQNALK 859
Query: 612 ISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYG 671
SANSVYGFTGA VGQLPC+ IS SVT+YGR+M++ TK LV++KF+ GY++++EVIYG
Sbjct: 860 TSANSVYGFTGAQVGQLPCLPISCSVTAYGRRMLDMTKNLVKEKFSVKEGYQYDSEVIYG 919
Query: 672 DTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW 731
DTDSVM++FG T+E M LG+EAA+Y++ F PIKLEFEK+Y PYLL++KKRYAGL W
Sbjct: 920 DTDSVMIKFGCKTIEETMVLGKEAAEYVTSFFADPIKLEFEKIYCPYLLMNKKRYAGLLW 979
Query: 732 TNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNR 791
TNP K+DK+D KGIETVRRDNC LVK++V L KILV+R A+ Y K ISDLL NR
Sbjct: 980 TNPIKYDKIDAKGIETVRRDNCPLVKDVVNTVLKKILVERSYEDAINYCKGVISDLLQNR 1039
Query: 792 MDLSLLVITKGLTK------TGDD---YEVKAAHVELAERMRKRDAATAPNVGDRVPYVI 842
+DLSLLVIT+GL K + DD Y+ K AHVELAE+MRKRD A+AP+VGDR+ +V+
Sbjct: 1040 IDLSLLVITRGLGKKAKKINSSDDKEVYQAKQAHVELAEKMRKRDEASAPSVGDRIAFVM 1099
Query: 843 IKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDH 902
+K K AK YE+SEDP+YVL+NN+PID +YL++Q+ +PL+RIFEPIL+N + LL+G+H
Sbjct: 1100 VKGTKDAKGYEKSEDPLYVLDNNLPIDYQHYLQHQLKQPLIRIFEPILQNPEQVLLTGEH 1159
Query: 903 TRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEV 962
TRSI + +N+G+ +F + SC+ CK+++ +G LC C ++Y + + E
Sbjct: 1160 TRSIHVPKVTNTGLGRFTIVKKSCLRCKSVVESGALCKDCMPEMKKIYIERKLEQITFEK 1219
Query: 963 LFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRW 1012
+ LW QCQ CQGSLH D+LC SRDCPIFYRR KA K++ E++ +DR+
Sbjct: 1220 NYNDLWIQCQRCQGSLHLDILCQSRDCPIFYRRVKAAKNLKESRDIIDRF 1269
>gi|392565561|gb|EIW58738.1| delta DNA polymerase [Trametes versicolor FP-101664 SS1]
Length = 1066
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/620 (65%), Positives = 495/620 (79%), Gaps = 10/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I+DLQNG E+RRRLAVYCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 445 QKEDVHHSVITDLQNGTPESRRRLAVYCLKDAYLPQRLMDKLMCFINYTEMARVTGVPFN 504
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQSIKVLSQL RKA ++P ++ GS++ YEGATV+E + G+Y+ PIATLD
Sbjct: 505 FLLSRGQSIKVLSQLFRKANDDGYIVPALRGEGSDE-QYEGATVIEPKKGYYDVPIATLD 563
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ +L L + +TP+ + FVKS +KG+LP ILE
Sbjct: 564 FSSLYPSIMMAHNLCYTTLLDKSTVERLKLVKDVDYIQTPNNDLFVKSTRRKGLLPTILE 623
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL+ ARKRAKADLK+ DP ++AVLDGRQLALKISANSVYGFTGAT+G+LPC+ ISSS T
Sbjct: 624 ELIGARKRAKADLKKETDPFKRAVLDGRQLALKISANSVYGFTGATIGKLPCLPISSSTT 683
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++ G+ H+A VIYGDTDSVMV+FG + M++G EAAD+
Sbjct: 684 SYGRQMIEKTKQEVEAEYCIANGHSHDATVIYGDTDSVMVRFGPTDLPTVMRMGSEAADF 743
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ FIKPIKLEFEKVY+PYLLISKKRYAGLYWT PEK+DKMDTKGIETVRRDNC LV
Sbjct: 744 VTAKFIKPIKLEFEKVYFPYLLISKKRYAGLYWTRPEKYDKMDTKGIETVRRDNCRLVST 803
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CLHK+L+DRD+ GA YVK TISDLL N++D+S LVITK L+KT DY K AHVE
Sbjct: 804 VIETCLHKMLIDRDVGGAEDYVKQTISDLLQNKVDMSQLVITKALSKT--DYASKQAHVE 861
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRDA +AP +GDRV YVIIK AKGA AYE+SEDPI+VLEN+IPIDT YYLENQ+
Sbjct: 862 LAERMKKRDAGSAPALGDRVAYVIIKGAKGAAAYEKSEDPIFVLENSIPIDTKYYLENQL 921
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKA------L 932
S PL+RIFEPIL + + LLSGDHTR+I ++TP+ G+MKFA + +C+GCK
Sbjct: 922 SNPLMRIFEPILGDKASSLLSGDHTRTIQVATPTVGGLMKFAVKTATCLGCKTPLRANNS 981
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+ NG +C++C+ R E Y K ++ EL+V F RLWTQCQ CQGSLHQDVLC+SRDCPIF
Sbjct: 982 VKNGAVCNNCRPRLGEFYQKQITTTSELQVRFSRLWTQCQRCQGSLHQDVLCSSRDCPIF 1041
Query: 993 YRRKKAQKDMAEAKLQLDRW 1012
Y RKKAQKD+ +A LDR+
Sbjct: 1042 YMRKKAQKDVEDASSVLDRF 1061
Score = 292 bits (747), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 159/352 (45%), Positives = 213/352 (60%), Gaps = 30/352 (8%)
Query: 61 DIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAII 120
D + +D WARP L + SI+FQQ+DI+ DS + +
Sbjct: 37 DANETRDAEGGADAWARPALPP-INPKRDSIIFQQIDIE----DSVEQ-----QTGGTTL 86
Query: 121 RIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ-F 179
R+FGVT++GHSV + F PYFYI+ P+G G +D+ F + L N+ VP
Sbjct: 87 RMFGVTQDGHSVLAHITDFLPYFYIATPRGFGNEDVGPFMRYL---------NNAVPGGL 137
Query: 180 VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG-------ILDRG-IQLDGLGM 231
VR +E+ +KRS+ Y+ F+KI VA + R +L+RG + + L
Sbjct: 138 VRDMELTKKRSLWGYKGDDWVSFIKITVADQRSLPKVRDKSSDSPRLLERGECRFNDLFN 197
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIIS 289
T+ESN+ + LRFMID +VG NWIEVP G+Y + S+CQLE ++ IS
Sbjct: 198 GEVATFESNIAYTLRFMIDTRVVGMNWIEVPAGQYIILEGKDKRSHCQLELSVKWNKFIS 257
Query: 290 RHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTL 349
P+G++SK AP RILSFDIECAGRKG FPE DPVIQ+AN+VT QGE +PFIRNV TL
Sbjct: 258 HAPDGQWSKTAPLRILSFDIECAGRKGIFPEAQVDPVIQIANMVTRQGESKPFIRNVFTL 317
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+CA IVG V+SF+ E ++LL WR+F+ EVDPDV+IGYNI FDLPYLI++
Sbjct: 318 NTCAHIVGSQVISFQNEAELLLKWREFVEEVDPDVVIGYNISGFDLPYLIDR 369
>gi|159463358|ref|XP_001689909.1| DNA polymerase delta subunit one [Chlamydomonas reinhardtii]
gi|158283897|gb|EDP09647.1| DNA polymerase delta subunit one [Chlamydomonas reinhardtii]
Length = 1091
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/624 (67%), Positives = 517/624 (82%), Gaps = 14/624 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS I+DLQ GN ETRRRLAVYCLKDAYLPQRLLDKLM+ +NY+EMARVTGVP+S
Sbjct: 468 QKEDVHHSAIADLQAGNEETRRRLAVYCLKDAYLPQRLLDKLMYTYNYIEMARVTGVPLS 527
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQ----AGSEQGTYEGATVLEARAGFYEKPI 515
+LL+RGQSIKV SQLLRKA K VIPN+K AG++ YEGATVL+ + GFY++P+
Sbjct: 528 YLLTRGQSIKVFSQLLRKAAAKGFVIPNIKVQGPVAGADGVGYEGATVLDPKIGFYDRPV 587
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILP 574
ATLDFASLYPSIMMA+NLCY+TL+T + +LN+ PPE ++PSG+ FV+++ Q+G+LP
Sbjct: 588 ATLDFASLYPSIMMAHNLCYTTLLTKD---QLNIVPPEDREQSPSGDWFVRNSRQRGLLP 644
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
EILEELLAARKRAK DLK KDP ++AVLDGRQLALK+SANSVYGFTGATVG++PC+ IS
Sbjct: 645 EILEELLAARKRAKNDLKAEKDPFKRAVLDGRQLALKVSANSVYGFTGATVGKMPCLAIS 704
Query: 635 SSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGRE 694
+S TSYGR+MI T++LV++ +T GYE + EVIYGDTDSVMV F V V AM+LGRE
Sbjct: 705 ASTTSYGREMIMTTRQLVQEHYTRANGYETDCEVIYGDTDSVMVNFKVADVARAMELGRE 764
Query: 695 AADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCL 754
AA +S F P+KLEFEKVYYPYLL++KKRYAGL WT PE DKMD+KGIETVRRDNCL
Sbjct: 765 AAAVVSKAFPPPVKLEFEKVYYPYLLMNKKRYAGLLWTRPETHDKMDSKGIETVRRDNCL 824
Query: 755 LVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA 814
LV+N+VT CL +IL+ +D+ GAV YVK I+DLLMN++DLSLLVI+KGLT+ D+YE K
Sbjct: 825 LVRNVVTTCLERILIGKDVQGAVGYVKGVIADLLMNKIDLSLLVISKGLTQDADEYEGKI 884
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYL 874
AHVELA++MRKRD ATAP VGDRVPYVIIKAAKGAKA+E++EDPIY LE+++PID +YL
Sbjct: 885 AHVELAKKMRKRDPATAPAVGDRVPYVIIKAAKGAKAWEKAEDPIYALEHSLPIDVQHYL 944
Query: 875 ENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GIMKFAKRQLSCIGCKAL 932
E+ +S+PLLRIFEP++KN KELL GDHTR I++STPS + GIM+FAK +SC+ CKA
Sbjct: 945 EHHLSQPLLRIFEPVMKN-PKELLCGDHTRCIAVSTPSTAAGGIMRFAKVTMSCLACKAP 1003
Query: 933 ISNG---TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
+ +G +LC HCK +EAE+Y +T+ V ELE +G LWT CQ CQGSLH DVLCTSRDC
Sbjct: 1004 LPSGCKDSLCGHCKPQEAEIYSRTLGTVSELEAQYGALWTACQRCQGSLHMDVLCTSRDC 1063
Query: 990 PIFYRRKKAQKDMAEAKLQLDRWN 1013
PIFYRRKK QKD+ EA QLDR++
Sbjct: 1064 PIFYRRKKVQKDLNEAMGQLDRFD 1087
Score = 306 bits (783), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 172/391 (43%), Positives = 236/391 (60%), Gaps = 25/391 (6%)
Query: 21 PNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPL 80
P K+QAT P DD ED D + PE L D+E + A R W RPP+
Sbjct: 20 PAKRQATGPDP---DDMDFIED---DPSGPPEP-----LEDVELGE--AGR--NWVRPPV 64
Query: 81 SSGYVSQCQSIMFQQLDIDYVIGD--SNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHG 138
+ + +I+FQQL++DY + + + + +P+ ++R+FGV G+SVC VHG
Sbjct: 65 AD-FDPASTAIVFQQLEVDYYLAEPRAGVDTVPVEVKQVPVLRLFGVNAAGNSVCALVHG 123
Query: 139 FEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKV--PQFVRHIEMVQKRSIMYYQQ 196
FEPYF I G D I L + V P R IE ++RSI +Q
Sbjct: 124 FEPYFLIERRPHWGADHIQALGLALNVGQELLGKAKGVGGPAVTR-IEPAERRSIWNFQP 182
Query: 197 -QKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG-MKSFMTYESNVLFALRFMIDCNIV 254
S FLKIVV++P +VA RG+L+ G+ L + TYESNVLF LRFM+DC +V
Sbjct: 183 PGTSTAFLKIVVSVPNLVAPARGLLEGGMSLSAVNDFVKCTTYESNVLFTLRFMVDCKVV 242
Query: 255 GGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAG 313
GGNW+E+P G Y+ +TA+ +++CQ+E Y +IS P+GE+S +AP RI+S DIEC G
Sbjct: 243 GGNWVELPAGAYQLETARPMTHCQIEAHIRYDKLISHAPDGEYSSVAPLRIMSIDIECCG 302
Query: 314 RKGHFPEPTHDPVIQVANLVTLQGEKQ-PFIRNVMTLKSCAPIVGVDVMSFETERDVLLA 372
RKG FPE DPVIQ+A++V++ G+ P ++N+MTL SCA IVG +VMSF E ++LL
Sbjct: 303 RKGCFPEAKIDPVIQIASMVSVSGKMDGPVVKNIMTLGSCASIVGAEVMSFNDEAEMLLR 362
Query: 373 WRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
WRD + E DPD++IGYNI FDLPYL E+ D
Sbjct: 363 WRDLLVESDPDIIIGYNILNFDLPYLYERAD 393
>gi|449547887|gb|EMD38854.1| hypothetical protein CERSUDRAFT_112578 [Ceriporiopsis subvermispora
B]
Length = 1085
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/620 (65%), Positives = 501/620 (80%), Gaps = 10/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQNG E+RRRLAVYCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 464 QKEDVHHSVITELQNGTPESRRRLAVYCLKDAYLPQRLMDKLMCFINYTEMARVTGVPFN 523
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQSIKVLSQL R+A ++ +IP++K GS++ YEGATV+E + G+Y+ PIATLD
Sbjct: 524 YLLSRGQSIKVLSQLFRRANEEGYLIPSLKGEGSDE-QYEGATVIEPKKGYYDVPIATLD 582
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ ++NL + +TP+ + FVKS +KG+LP ILE
Sbjct: 583 FSSLYPSIMMAHNLCYTTLLDKNTIDRMNLVKDIDYIQTPNNDFFVKSTKRKGLLPTILE 642
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L++ RKRAKADLK+ DP ++AVLDGRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT
Sbjct: 643 DLISTRKRAKADLKKETDPFKRAVLDGRQLALKISANSVYGFTGATIGKLPCLAISSSVT 702
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE +F++ G++HNA+VIYGDTDSVMV+FG + M LG +AAD+
Sbjct: 703 SYGRQMIEQTKREVEAEFSSDNGHKHNAKVIYGDTDSVMVKFGPTDLAEVMALGAQAADF 762
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ FIKPIKLEFEKVY+PYLLISKKRYAGLYWT P+K+DKMDTKGIETVRRDNC LV
Sbjct: 763 VTSKFIKPIKLEFEKVYFPYLLISKKRYAGLYWTRPDKYDKMDTKGIETVRRDNCRLVST 822
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CLHK+L+DRD+ GA +Y K ISDLL NR+D+S LVITK L K DY K AHVE
Sbjct: 823 VIETCLHKLLIDRDVRGAEEYTKQIISDLLQNRVDMSQLVITKALAKA--DYAAKQAHVE 880
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++RDA +AP +GDRV YVIIK KGA AYE+SEDPIYVLENNIPIDT YYLENQ+
Sbjct: 881 LAERMKQRDAGSAPALGDRVAYVIIKGVKGAAAYEKSEDPIYVLENNIPIDTKYYLENQL 940
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKA------L 932
S PL+RIFEPIL + + LLSGDHTR+I I+TP+ G+MKFA + ++C+GCK
Sbjct: 941 SNPLMRIFEPILGDKASSLLSGDHTRTIQIATPTVGGLMKFAVKTVTCLGCKTPLRATNS 1000
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+ NG +C++C+ R ELY K V+ EL+V F RLWTQCQ CQGSLHQDVLC+S+DCPIF
Sbjct: 1001 VKNGAVCNNCRPRVGELYHKQVTSTSELQVRFSRLWTQCQRCQGSLHQDVLCSSKDCPIF 1060
Query: 993 YRRKKAQKDMAEAKLQLDRW 1012
Y RKK+QKD+ +A LDR+
Sbjct: 1061 YMRKKSQKDVEDATAVLDRF 1080
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 156/334 (46%), Positives = 202/334 (60%), Gaps = 29/334 (8%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDI----DYVIGDSNRELLPLSSGSAAIIRIFGVTREGH 130
WARPPL + +I+FQQ+D+ D V G +R+FGVT EG+
Sbjct: 77 WARPPLPP-VDPKKDTIIFQQIDVEDAADAVTGGYG-------------LRMFGVTEEGN 122
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRS 190
SV V F PYFY++ P+G DD F Q L RE N VRH+E+V +RS
Sbjct: 123 SVLMYVKDFLPYFYVAAPRGFTKDDTFAFEQYLN---REGNGG-----VVRHVELVSRRS 174
Query: 191 IMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMI 249
+ Y+ PF+KIV+ P + RG+ + G GL + TYESN+ + LRFMI
Sbjct: 175 LWGYRGDDYVPFIKIVLDTPRSLPKVRGLFESGKCTFRGLFGDNVSTYESNIAYLLRFMI 234
Query: 250 DCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
D +VG NWIEVP G Y K S+CQLE + IS EG +SK+AP RILSF
Sbjct: 235 DTKVVGMNWIEVPAGNYEVLTGNKKRSHCQLEMVVRWDKFISHPAEGAWSKIAPLRILSF 294
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIECAGRKG FPE DPVIQ+AN+VT QGE +PFIRN+ TL +CA IVG V+S+ E
Sbjct: 295 DIECAGRKGIFPEANIDPVIQIANMVTRQGESKPFIRNIFTLNTCAHIVGSQVLSYSDES 354
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++LLAWR F+ +VDPDV+ GYN+ FD+PYL+++
Sbjct: 355 EMLLAWRAFVEQVDPDVITGYNMANFDIPYLLDR 388
>gi|395331770|gb|EJF64150.1| hypothetical protein DICSQDRAFT_81194 [Dichomitus squalens LYAD-421
SS1]
Length = 1083
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/620 (65%), Positives = 497/620 (80%), Gaps = 10/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQNG E+RRRLAVYCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 462 QKEDVHHSVITELQNGTPESRRRLAVYCLKDAYLPQRLMDKLMCFINYTEMARVTGVPFN 521
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQSIKVLSQL RKA V+P +K GS++ YEGATV+E + G+Y+ PIATLD
Sbjct: 522 YLLARGQSIKVLSQLFRKANDDGYVVPALKGEGSDE-QYEGATVIEPKKGYYDVPIATLD 580
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ +L L + +TP+ + FVKS+ +KG+LP ILE
Sbjct: 581 FSSLYPSIMMAHNLCYTTLLDKATVDRLGLVRDVDYVQTPNNDLFVKSSRRKGLLPTILE 640
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L++ARKRAKADLK+ DP ++AVLDGRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT
Sbjct: 641 DLISARKRAKADLKKETDPFKRAVLDGRQLALKISANSVYGFTGATIGKLPCLAISSSVT 700
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK+ VE ++ G++H+A VIYGDTDSVMV+FG + M+LG EAAD+
Sbjct: 701 AYGRQMIEKTKQEVEAEYCIANGHDHDATVIYGDTDSVMVRFGPTDLPTVMRLGSEAADF 760
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++G FIKPIKLEFEKVY+PYLLISKKRYAGLYWT PEK+DKMDTKGIETVRRDNC LV
Sbjct: 761 VTGKFIKPIKLEFEKVYFPYLLISKKRYAGLYWTRPEKYDKMDTKGIETVRRDNCRLVST 820
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CLHK+L+DRD+ A +YVK ISDLL NR+D+S LVITK L K DY K AHVE
Sbjct: 821 VIETCLHKLLIDRDVKAAEEYVKQVISDLLQNRIDMSQLVITKALAKA--DYAAKQAHVE 878
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++RDA +AP +GDRV YVIIK KGA AYE+SEDPIYVLENNIPIDT YYL+NQ+
Sbjct: 879 LAERMKQRDAGSAPALGDRVAYVIIKGIKGAAAYEKSEDPIYVLENNIPIDTKYYLDNQL 938
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKA------L 932
S PL+RIFEPI+ + + LLSGDHTR+I I+TP+ G+MKFA + ++C+GCK
Sbjct: 939 SNPLMRIFEPIMGDKANSLLSGDHTRTIQIATPTVGGLMKFAVKTVTCLGCKTPLRPNNS 998
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+ G +C++C+ R ELY K V+ EL+V F RLWTQCQ CQGSLHQDVLCTSRDCPIF
Sbjct: 999 VKGGAVCNNCRPRLGELYQKQVTSASELQVRFSRLWTQCQRCQGSLHQDVLCTSRDCPIF 1058
Query: 993 YRRKKAQKDMAEAKLQLDRW 1012
Y RKKAQKD+ +A LDR+
Sbjct: 1059 YMRKKAQKDVEDANAVLDRF 1078
Score = 301 bits (770), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/330 (46%), Positives = 203/330 (61%), Gaps = 21/330 (6%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
WARPPL ++ SI+FQQ+DI+ + +R+FGVT++GHSV
Sbjct: 75 WARPPLPPINPNR-DSIIFQQIDIEDSVDQQT---------GGTTLRMFGVTQDGHSVLA 124
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V F PYFYI+ P+G +D F + + + VRH+E+ KRS+ Y
Sbjct: 125 LVTDFLPYFYIATPRGFSNEDAGPFQRHINNILGYGA--------VRHVELTTKRSLWGY 176
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNI 253
+ F+KI V + RG+ +RG + +GL T+ESN+ + LRFMID +
Sbjct: 177 RGDDWVSFVKITVIDQRSIPKVRGLFERGECKFNGLFETDVATFESNIAYTLRFMIDTRV 236
Query: 254 VGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC 311
VG NWIEVP GKY + S+CQ+EF + IS P+G++SK AP RILSFDIEC
Sbjct: 237 VGMNWIEVPAGKYSLLEGKAKKSHCQIEFTVKWDQFISHAPDGQWSKTAPLRILSFDIEC 296
Query: 312 AGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLL 371
AGRKG FPEP DPVIQ+AN+VT QGE +PFIRNV TL SCA IVG V+SF E ++L+
Sbjct: 297 AGRKGIFPEPHIDPVIQIANMVTRQGESKPFIRNVFTLNSCAHIVGSQVLSFTDEAELLV 356
Query: 372 AWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
WR+FI EVDPDV+IGYNI FD PYL+++
Sbjct: 357 RWREFIEEVDPDVIIGYNISNFDFPYLLDR 386
>gi|320162791|gb|EFW39690.1| DNA polymerase delta1 catalytic subunit [Capsaspora owczarzaki ATCC
30864]
Length = 1295
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/641 (64%), Positives = 502/641 (78%), Gaps = 31/641 (4%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+S IS+LQNGN +TRRRLAVYCLKDAYLP RLL KLM + NY+EMARVTGVP S
Sbjct: 658 QKEDVHYSHISELQNGNEQTRRRLAVYCLKDAYLPLRLLGKLMCVVNYMEMARVTGVPFS 717
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK +++NLVIP V+ GS YEGATV+E G+YE PIATLD
Sbjct: 718 YLLSRGQQIKVVSQLFRKVREQNLVIPFVESGGSGDTQYEGATVIEPNRGYYENPIATLD 777
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+NLCY+TLV P + N P E KTP+G FVK NL++G+LPEILE
Sbjct: 778 FASLYPSIMMAHNLCYTTLVNPGMS---NRPSEADCTKTPTGHIFVKPNLRRGVLPEILE 834
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+LL ARKRAK DLK+ D ++AVLDGRQLALKISANSVYGFTGATVG+LPC+EISSSVT
Sbjct: 835 DLLEARKRAKNDLKKETDKFKRAVLDGRQLALKISANSVYGFTGATVGKLPCLEISSSVT 894
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+GR MI+ T++ VE ++T GY+H+A VIYGDTDSVMV+FGVP AMKLG EAA
Sbjct: 895 GFGRDMIKQTQEAVEKQYTIANGYQHDARVIYGDTDSVMVEFGVPDTHTAMKLGTEAAAL 954
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
IS FIKPIKLEFEKVY+PYLLI+KKRYAGLYWTNP+K+DKMDTKGIETVRRDNC LVKN
Sbjct: 955 ISAQFIKPIKLEFEKVYFPYLLINKKRYAGLYWTNPDKYDKMDTKGIETVRRDNCPLVKN 1014
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD--------- 809
L+ CL K+L++RD GAVQ+ K TISDLL NR+D+S LVITK L+KT DD
Sbjct: 1015 LIGTCLQKLLIERDKEGAVQFAKDTISDLLCNRIDISQLVITKALSKTADDDDDGEGDGG 1074
Query: 810 -------------YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSE 856
Y VK AH ELAERMRKRDA +AP +GDRVPYVII+AAK A+AYE+SE
Sbjct: 1075 KKSGGGGAGKKKAYAVKQAHAELAERMRKRDAGSAPTLGDRVPYVIIRAAKNARAYEKSE 1134
Query: 857 DPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGI 916
DP+YVLE+N+P+DT YYLENQ+SKPLLRIFEPIL + ++ LL GDHTR+I+++TP+ G+
Sbjct: 1135 DPLYVLEHNLPLDTAYYLENQLSKPLLRIFEPILGSRAQTLLDGDHTRTIAVATPTTGGL 1194
Query: 917 MKFAKRQLSCIGCKALISNG--TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQEC 974
KF R + C+GCK ++ +CS+CK REA+L+ + ++ + LE+ F RLWT+CQ C
Sbjct: 1195 SKFTVRSIRCVGCKVPLARNEDAVCSNCKPREAQLFQQEIAGLHALEMKFSRLWTECQRC 1254
Query: 975 QGSLHQDVLCTSRDCPIFYRRKKAQKDMA---EAKLQLDRW 1012
QGSLH++V+CTS DCPIFY R+K QKD++ E + D W
Sbjct: 1255 QGSLHEEVICTSCDCPIFYMRRKVQKDLSDQHEIVRRFDSW 1295
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 149/377 (39%), Positives = 217/377 (57%), Gaps = 52/377 (13%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W R P+ S +++FQQL+ID +G+ + + I+R++GVT G+SV C
Sbjct: 208 WLRRPVPS-LSPATDALIFQQLEIDTYMGEHLAGMPGADASRVPILRMYGVTEAGNSVMC 266
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIM 192
VHGF PYFY G+ D + F ++L +++ R ++ + + V +E+V K SIM
Sbjct: 267 HVHGFLPYFYAPA-AGLTEDLLPGFMRVLNQNLQQQQRVARDNLSEVVLSVELVMKESIM 325
Query: 193 YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCN 252
Y+ + PF++I +ALPT V + R IL+RG+ + LG ++F TYE+N+ + LRFMID
Sbjct: 326 YFHNNRKLPFVRITLALPTYVTAARKILERGLDVPNLGFRAFETYETNIEYVLRFMIDTK 385
Query: 253 IVGGNWIEVPVGKYR---------------------------------KTAKT------- 272
+ G +WIE+P GK++ + KT
Sbjct: 386 VTGCSWIELPAGKWQLRTHQGSEENHDAFGKKGKGSSLFSNTYGDSAGGSGKTGLAAAVA 445
Query: 273 -------LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP 325
S+CQ+E D + IS EGE+SK+AP RILSFDIECAGRKG FPEP DP
Sbjct: 446 GALAVSRTSHCQIEVDVAWDAFISHGAEGEWSKIAPIRILSFDIECAGRKGIFPEPEVDP 505
Query: 326 VIQVANLVTLQGEK-QPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDV 384
VIQ+AN+V++ G+ +PF+RNV TL +CA IVG DV++ TE ++L W DF R VD D+
Sbjct: 506 VIQIANMVSINGDNSKPFVRNVFTLGTCANIVGSDVIACATEHELLRKWADFFRVVDADI 565
Query: 385 MIGYNICKFDLPYLIEK 401
+ GYN+ FDL YL+ +
Sbjct: 566 VTGYNVINFDLGYLLNR 582
>gi|389745703|gb|EIM86884.1| hypothetical protein STEHIDRAFT_79581, partial [Stereum hirsutum
FP-91666 SS1]
Length = 1077
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/621 (64%), Positives = 499/621 (80%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQNG +E+RRRLAVYCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 456 QKEDVHHSVITELQNGTSESRRRLAVYCLKDAYLPQRLMDKLMCFVNYTEMARVTGVPFN 515
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQSIKVLSQL RKA + V+P++K GS++ YEGATV+E + G+Y+ PIATLD
Sbjct: 516 YLLSRGQSIKVLSQLFRKANDEGYVVPSLKGEGSDE-QYEGATVIEPKKGYYDAPIATLD 574
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ +LNL + +TP+ + F+KS+ +KG+LP +LE
Sbjct: 575 FSSLYPSIMMAHNLCYTTLLDKNTIDRLNLQKDIDYIQTPNNDFFIKSHKRKGLLPTVLE 634
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L+ ARKRAKADLK DP ++AVLDGRQLALK+SANSVYGFTGAT+G+LPC+ ISSSVT
Sbjct: 635 DLIGARKRAKADLKNETDPFKRAVLDGRQLALKVSANSVYGFTGATIGKLPCLPISSSVT 694
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK VE ++ G+ H+A+VIYGDTDSVMV+FG P +E M+LG EAA++
Sbjct: 695 SYGRQMIEKTKSEVEAEYCVANGHSHDAKVIYGDTDSVMVKFGPPDLEKVMQLGSEAAEF 754
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ F+KPIKLEFEKVY+PYLLISKKRYAGLYWT P+K+DKMD+KGIETVRRDNC LV
Sbjct: 755 VTQKFVKPIKLEFEKVYFPYLLISKKRYAGLYWTRPDKYDKMDSKGIETVRRDNCRLVST 814
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CLHK+L+DRD+ GA Y K ISDLL N++D+S LVITK L K DY K AHVE
Sbjct: 815 VIETCLHKMLIDRDVKGAEDYTKQVISDLLQNKVDMSQLVITKALAKA--DYAAKQAHVE 872
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++RDA +AP +GDRV YVI+K KGA AYE+SEDPIYVLEN+IPIDT YYLENQ+
Sbjct: 873 LAERMKQRDAGSAPALGDRVAYVIVKGIKGAAAYEKSEDPIYVLENSIPIDTKYYLENQL 932
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL------ 932
SKPL+RIFEPIL + + LLSGDHTR+I I+TP+ G+MKFA + ++C+GCK
Sbjct: 933 SKPLMRIFEPILGDKASSLLSGDHTRTIQIATPTVGGLMKFAVKTMTCLGCKTALRPNNS 992
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+ G +C++C+ R ELY K VS ++V F RLWTQCQ CQGSLHQDVLC+S+DCPIF
Sbjct: 993 VKGGAVCNNCRPRLGELYQKQVSTTSAMQVSFSRLWTQCQRCQGSLHQDVLCSSKDCPIF 1052
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y RKKAQKD+ +A L+R++
Sbjct: 1053 YMRKKAQKDVEDAGGVLERFD 1073
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/397 (42%), Positives = 227/397 (57%), Gaps = 27/397 (6%)
Query: 12 PPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDI-EQRQDFAS 70
P T KE+ P+K + P L ++L + + +L+ + E+ D A
Sbjct: 4 PKRTTKENLPHKSREADNAEPAAKRRKLGTQTSGSQSLPTQSSFADVLQKLKEESADGAE 63
Query: 71 R---LAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTR 127
W+RP L + + SI+FQQ+D++ E + SSG I R+FGVT
Sbjct: 64 AEGGAGLWSRPELPA-IDEKKDSIVFQQIDVE--------ESVDASSGQVTI-RMFGVTE 113
Query: 128 EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQ 187
GHSV V F PYFYI P+G +D++ F L+ VR +E+VQ
Sbjct: 114 AGHSVLMHVTQFSPYFYIPVPRGFTNEDVNAFRDHLDASAGG----------VRAVELVQ 163
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALR 246
KRS+ Y+ F KI V P + RG+ +RG L TYESN+ + LR
Sbjct: 164 KRSLWGYKGDDLVMFAKITVTDPKALPRVRGVFERGECSFRDLFKGIVSTYESNIAYTLR 223
Query: 247 FMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
FMID +VG NWIEVP GKY K S CQ+E ++D IS P+G++SK+AP R+
Sbjct: 224 FMIDTKVVGMNWIEVPAGKYMINKGKSKKSQCQIEMTVRWNDFISHPPDGQWSKLAPLRV 283
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPE DPVIQ+AN+VT QGE +PFIRN+ TL +C+ IVG V+SF+
Sbjct: 284 LSFDIECAGRKGIFPEANVDPVIQIANMVTRQGESKPFIRNIFTLNTCSHIVGSQVLSFD 343
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
ER++L AW +FI E DPDV+IGYNI FDLPYL+++
Sbjct: 344 DEREMLQAWCNFINEADPDVVIGYNISNFDLPYLLDR 380
>gi|302687116|ref|XP_003033238.1| hypothetical protein SCHCODRAFT_81939 [Schizophyllum commune H4-8]
gi|300106932|gb|EFI98335.1| hypothetical protein SCHCODRAFT_81939 [Schizophyllum commune H4-8]
Length = 1072
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/622 (64%), Positives = 500/622 (80%), Gaps = 11/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++LQNG E+RRRLAVYCLKDAYLPQRLLDKLM NY+EMARVTGVP +
Sbjct: 450 QKEDVHHSIITELQNGTDESRRRLAVYCLKDAYLPQRLLDKLMCFVNYIEMARVTGVPFN 509
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQSIKVLSQL RKA N +IP +K GS++ YEGATV+E + G+Y+ PIATLD
Sbjct: 510 YLLARGQSIKVLSQLFRKANSDNYIIPALKGEGSDE-QYEGATVIEPKKGYYDAPIATLD 568
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TLV +L L + +TP+ + FVK+ +KG+LP +LE
Sbjct: 569 FSSLYPSIMMAHNLCYTTLVDRSTIERLGLVKDVDYIQTPNNDFFVKATKRKGLLPTVLE 628
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L++ARKRAKADLK+ DP ++AVLDGRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT
Sbjct: 629 DLISARKRAKADLKKETDPFKRAVLDGRQLALKISANSVYGFTGATIGKLPCLAISSSVT 688
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++ G++H+AEVIYGDTDSVMV+FG + M++G EAAD+
Sbjct: 689 SYGRQMIEKTKQEVESQYCIANGFKHDAEVIYGDTDSVMVKFGPADLATVMEMGAEAADF 748
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++G F+KPIKLEFEKVY+PYLLISKKRYAGLYWT EK+DK+D+KGIETVRRDNC LV
Sbjct: 749 VTGKFVKPIKLEFEKVYFPYLLISKKRYAGLYWTKTEKYDKLDSKGIETVRRDNCRLVST 808
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CLHK+L+DRD+ GA YVK TIS+LL N++D+S LVITK L K DY K AHVE
Sbjct: 809 VIETCLHKMLIDRDVKGAEDYVKHTISELLQNKVDMSQLVITKALAKA--DYTGKQAHVE 866
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP +GDRV YVIIK KGA AYE++EDP+YVLENN+PIDT YYLENQ+
Sbjct: 867 LAERMRKRDKHSAPALGDRVAYVIIKGMKGAAAYEKAEDPLYVLENNVPIDTQYYLENQL 926
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----- 933
SKPL+RIFEPIL + + LLSGDHTR+I I+TP+ G+MKFA + ++C+GCK +
Sbjct: 927 SKPLMRIFEPILGSRANSLLSGDHTRTIQIATPTVGGLMKFAVKTVTCLGCKTPLRAGVN 986
Query: 934 --SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
+ G +C++C+GR ELY K V EL+ F RLWTQCQ CQGSLHQDVLC+++DCPI
Sbjct: 987 SQAGGAVCNNCRGRMPELYQKQVMTASELQTRFARLWTQCQRCQGSLHQDVLCSAKDCPI 1046
Query: 992 FYRRKKAQKDMAEAKLQLDRWN 1013
FY RKKAQKD+ +A L+R++
Sbjct: 1047 FYMRKKAQKDVEDANSTLERFD 1068
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 209/333 (62%), Gaps = 25/333 (7%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
WARP L+ Q SI+FQQ+D+++ I D N + +R+FGVT GHSV
Sbjct: 67 WARPALAP-INPQTDSIVFQQIDVEHEI-DRN-------ANGCTNLRMFGVTDAGHSVLA 117
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V F PYFY++ P+G DD++ F L N+ V IE+V+KRS+ Y
Sbjct: 118 TVTDFLPYFYVAQPRGFTNDDLNSFKGYL---------NNVTGGCVIKIEIVKKRSLWGY 168
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILD-RGIQLDGLGMKSFMTYESNVLFALRFMIDCNI 253
PFLK+ + P + RG D G+ G +K TYESN+++ LRFMID N+
Sbjct: 169 MGDAVSPFLKLTITEPRSLPR-RGECDFNGLFPVGDPIK---TYESNIVYPLRFMIDTNV 224
Query: 254 VGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC 311
VG NW+E+P GKY + S CQ+E + Y IS P+G++ ++AP RILSFDIEC
Sbjct: 225 VGMNWLELPAGKYDLIPDKQKKSRCQIEVNVRYDAFISHPPDGKWQRIAPLRILSFDIEC 284
Query: 312 AGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLL 371
AGR+G FPE DPVIQ+AN+VT QGE QPF+RNV TL +CA IVG V+S++ ER++L+
Sbjct: 285 AGRQGIFPEAKVDPVIQIANMVTRQGEGQPFVRNVFTLNTCAHIVGSQVLSYKNEREMLM 344
Query: 372 AWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
AWRDF+ EVDPDV+IGYNI FD PYL+++ +
Sbjct: 345 AWRDFVEEVDPDVVIGYNISNFDFPYLMDRAEA 377
>gi|390596710|gb|EIN06111.1| delta DNA polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 1052
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/620 (65%), Positives = 495/620 (79%), Gaps = 10/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQNG E+RRRLAVYCLKDAYLPQRL+DKLM++ NY EMARVTGVP +
Sbjct: 431 QKEDVHHSVITELQNGTPESRRRLAVYCLKDAYLPQRLMDKLMYLVNYTEMARVTGVPFN 490
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQSIKVLSQL RKA + ++P K GS++ YEGATV+E + G+Y+ PIATLD
Sbjct: 491 YLLARGQSIKVLSQLFRKANDEGYLVPVFKGEGSDE-QYEGATVIEPKKGYYDSPIATLD 549
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ +L L + +TP+ + FV S +KG+LP ILE
Sbjct: 550 FSSLYPSIMMAHNLCYTTLLDKATIDRLQLVKDVDYIQTPNNDFFVTSTKRKGLLPTILE 609
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L++ARKRAKADLK+ DP ++AVLDGRQLALK+SANSVYGFTGAT+G+LPC+ ISSS T
Sbjct: 610 DLISARKRAKADLKKESDPFKRAVLDGRQLALKVSANSVYGFTGATIGKLPCLAISSSTT 669
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++ G+ HNAEVIYGDTDSVMV+FG ++ M LG EAA++
Sbjct: 670 SYGRQMIEKTKQEVEAEYCIANGHSHNAEVIYGDTDSVMVKFGPSDLKEVMALGSEAAEF 729
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ FIKPIKLEFEKVY+PYLLISKKRYAGLYWT PEK+DKMD+KGIETVRRDNC LV
Sbjct: 730 VTTKFIKPIKLEFEKVYFPYLLISKKRYAGLYWTKPEKYDKMDSKGIETVRRDNCRLVST 789
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CLHK+L+DRD+ GA +Y K ISDLL N++D+S LVITK L K DY K AHVE
Sbjct: 790 VIETCLHKMLIDRDVKGAEEYTKQMISDLLQNKVDMSQLVITKALAKA--DYAAKQAHVE 847
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++RDA +AP +GDRV YVI+K KGA AYE+SEDPIYVLENNIPIDT YYL+NQ+
Sbjct: 848 LAERMKQRDAGSAPALGDRVAYVIVKGIKGAAAYEKSEDPIYVLENNIPIDTKYYLDNQL 907
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL------ 932
SKPL+RIFEPIL + LLSG HTRSI I+TP+ G+MKFA + ++C+GCK
Sbjct: 908 SKPLMRIFEPILGEKASSLLSGGHTRSIQIATPTVGGLMKFAVKTVTCLGCKTALKANNS 967
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+ NG +C++C+ + ELY K VS +LEV F RLWTQCQ CQGSLHQDVLCTSRDCPIF
Sbjct: 968 VPNGAVCNNCRPKLGELYHKQVSTTSDLEVRFSRLWTQCQRCQGSLHQDVLCTSRDCPIF 1027
Query: 993 YRRKKAQKDMAEAKLQLDRW 1012
Y RKKAQKD+ +A LDR+
Sbjct: 1028 YMRKKAQKDVEDAHGVLDRF 1047
Score = 300 bits (768), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/333 (47%), Positives = 203/333 (60%), Gaps = 28/333 (8%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
WARP L + SI+FQQ+DI+Y +S+ +R+FGVT +GHSV
Sbjct: 45 WARPALRP-IDEKRDSIIFQQIDIEYHTENSS---------GGVTLRMFGVTEDGHSVLA 94
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V+ F+PYFYI P+G DDI F L ++ VR IE+V+KRSI Y
Sbjct: 95 HVYDFDPYFYIPVPRGFTEDDIPSFLLYLNNQLGAG--------CVRKIELVKKRSIWGY 146
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDR------GIQLDGLGMKSFMTYESNVLFALRFM 248
+ PF+K++ P V R D G + D L + T+ESN+ + LRFM
Sbjct: 147 RGDDWVPFMKLITDNPRNVPKVR---DEPIPCICGFKRD-LFPEQTTTFESNLAYVLRFM 202
Query: 249 IDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
ID +VG NWIEVP GKY S CQ+E + IS PEG +SK+AP RILSFD
Sbjct: 203 IDTKVVGMNWIEVPAGKYNLVKDKKSQCQIELSVRWDHFISHAPEGNWSKLAPLRILSFD 262
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPE DPVIQ+AN+VT+QGE +PFIRNV TL SCA IVG V+S++ E
Sbjct: 263 IECAGRKGIFPEANVDPVIQIANMVTIQGESKPFIRNVFTLNSCAHIVGSQVLSYDDESQ 322
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AWRDF+ +VDPDV+IGYNI FDLPYL+++
Sbjct: 323 MLQAWRDFVEQVDPDVVIGYNISNFDLPYLMDR 355
>gi|50543418|ref|XP_499875.1| YALI0A08426p [Yarrowia lipolytica]
gi|49645740|emb|CAG83802.1| YALI0A08426p [Yarrowia lipolytica CLIB122]
Length = 1072
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/620 (65%), Positives = 499/620 (80%), Gaps = 8/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGNA+TRRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP S
Sbjct: 451 QKEDVHHSIITDLQNGNADTRRRLAVYCLKDAYLPQRLMDKLMCLINYTEMARVTGVPFS 510
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ IKV+SQL RKA + +VIPN+KQ GS + YEGATV+E G+Y+ PIATLD
Sbjct: 511 FLLSRGQQIKVISQLFRKALEVGMVIPNLKQDGSSEEQYEGATVIEPERGYYDIPIATLD 570
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ +L+L E ++TP+G+ FV +KGILP +LE
Sbjct: 571 FSSLYPSIMMAHNLCYTTLLDKATVERLDLKLDEDYHRTPNGDLFVNQKTRKGILPIVLE 630
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARK+AKADLK+ DP +KAVLDGRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 631 ELLSARKKAKADLKKETDPFKKAVLDGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 690
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MI+ TK+ VE+K+T GY NA+VIYGDTDSVMV+FGVP ++ AM +G EAA+Y
Sbjct: 691 AYGRDMIQFTKEQVENKYTKANGYPENAKVIYGDTDSVMVKFGVPDLKTAMDMGLEAAEY 750
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWTNPEKFDKMDTKGIETVRRDNC LV+N
Sbjct: 751 VSEMFLKPIKLEFEKVYFPYLLINKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCRLVQN 810
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L KIL+DRD+ GA YVK+ +++LL N++DLS LVITK L++ DY K AHVE
Sbjct: 811 VIETVLRKILMDRDVEGAQAYVKTMVANLLQNKVDLSQLVITKQLSR--QDYAAKQAHVE 868
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVIIK A G K YE+SEDP YVLENNIPIDT YYLENQ+
Sbjct: 869 LAERMRKRDAGSAPALGDRVAYVIIKGAVGGKNYEKSEDPSYVLENNIPIDTKYYLENQL 928
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
KPL RIF+PIL + S +L++G HTR+I+++ PS G+MKFA + C GC+ +
Sbjct: 929 QKPLQRIFDPILGERKSAQLMTGAHTRTITVAAPSTGGLMKFAVKTEMCKGCRTPLRGKW 988
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
+ G +C +C + LY + + Q+ ELEV FG+LWT+CQ CQGSLHQD+LCTSRDCPIF+
Sbjct: 989 AKGAVCENCVDKAGALYQQALGQLSELEVKFGKLWTECQRCQGSLHQDILCTSRDCPIFF 1048
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
R++ QKD+ + +L +++
Sbjct: 1049 MRRRVQKDIQSSVAELSKFD 1068
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 191/336 (56%), Gaps = 31/336 (9%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W RP + Q I FQQ+D + S A++R+FGVT+EGH++ C
Sbjct: 62 WPRPEWKE-FDPQTTDISFQQIDAEEA-----------SVNGHAVVRLFGVTKEGHTILC 109
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
+ GF YFY P G +++S ++ A N+ VP + +E+ ++ S Y
Sbjct: 110 NIRGFCHYFYAPVPVGFKAENLS--------TLKSAIANT-VPDALERLEVCERESFWGY 160
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRGIQLD--------GLGMKSFMTYESNVLFALR 246
F KI P ++ R + G L+ G+ + T N+ + LR
Sbjct: 161 NGGAKAKFFKIFATNPKLIPKLRSAFENG-NLNFPSSHAQVGMLFANGCTSFDNIPYVLR 219
Query: 247 FMIDCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRIL 305
MIDC+I G +W+ +P GKY +T +S CQ E + Y D+I+ +GE+S +AP R+L
Sbjct: 220 CMIDCHISGMSWVTLPKGKYTIETQSLVSRCQREINISYKDLIAHPADGEWSDIAPLRVL 279
Query: 306 SFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFET 365
SFDIECAGRKG FP+P DP+IQ+AN+V+ QG+ +PF+RNV TL +C+PI G V+ E+
Sbjct: 280 SFDIECAGRKGVFPDPKIDPIIQIANVVSRQGDTRPFVRNVFTLNTCSPIAGAQVLEHES 339
Query: 366 ERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L+ W+ F+ EVDPDV+IGYN FD PYLI++
Sbjct: 340 EGDMLMRWKQFVNEVDPDVIIGYNTTNFDFPYLIDR 375
>gi|426196824|gb|EKV46752.1| hypothetical protein AGABI2DRAFT_186127 [Agaricus bisporus var.
bisporus H97]
Length = 1071
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/621 (65%), Positives = 495/621 (79%), Gaps = 9/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L NG E+RRRLAVYCLKDAYLPQRLLDKLM NY EMARVTGVP +
Sbjct: 449 QKEDVHHSVITELYNGTPESRRRLAVYCLKDAYLPQRLLDKLMCFVNYTEMARVTGVPFN 508
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQSIKVLSQL RKA ++ VIP +K G++ YEGATV+E + G+Y+ PIATLD
Sbjct: 509 YLLSRGQSIKVLSQLFRKANEEGYVIPALKGEGTDGEAYEGATVIEPKKGYYDVPIATLD 568
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ KL+L + +TP+ + FV S +KG+LP ILE
Sbjct: 569 FSSLYPSIMMAHNLCYTTLIDGNMIEKLDLVKDVDYIQTPNNDFFVTSMKRKGLLPTILE 628
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L++ARKRAKADLK KDP +KAVLDGRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 629 DLISARKRAKADLKMEKDPFKKAVLDGRQLALKISANSVYGFTGATVGKLPCLPISSSVT 688
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK+ VE +F G++++A VIYGDTDSVMV+FG + M LG EAA++
Sbjct: 689 AYGRQMIEKTKQEVEAEFCIANGHQYDARVIYGDTDSVMVKFGQNDLAQVMALGSEAAEF 748
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVYYPYLLISKKRYAGLYWT EK+DKMD+KGIETVRRDNC LV
Sbjct: 749 VSAKFIKPIKLEFEKVYYPYLLISKKRYAGLYWTKAEKYDKMDSKGIETVRRDNCRLVST 808
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ LHK+L+DRD+ A YVK I+DLL N++D+S LVITK L+KT DY K AHVE
Sbjct: 809 VIETSLHKLLIDRDVKAAEIYVKQMIADLLQNKVDMSQLVITKALSKT--DYAGKQAHVE 866
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++RDA +AP +GDRV YVIIK KGA AYE+SEDP+YVLEN+IPIDT YYLENQ+
Sbjct: 867 LAERMKQRDAGSAPALGDRVAYVIIKGIKGAAAYEKSEDPLYVLENSIPIDTKYYLENQL 926
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL------ 932
SKPL+RIFEPIL + LLSGDHTR+I I+TP+ G+MKFA + ++C+GCK
Sbjct: 927 SKPLMRIFEPILGEKASSLLSGDHTRTIQIATPTVGGLMKFAVKTVTCLGCKTALKTNNS 986
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
I+NG +C++C+ R +ELY K V EL+V F RLWTQCQ CQGSLHQDVLCTS+DCPIF
Sbjct: 987 IANGAICNNCRPRISELYQKQVMSTSELQVRFARLWTQCQRCQGSLHQDVLCTSKDCPIF 1046
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y RKKAQKD +A L+R++
Sbjct: 1047 YMRKKAQKDAEDANTALERFD 1067
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 203/355 (57%), Gaps = 39/355 (10%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+W RP L Q SI+FQQ+D++ + D N IR++GVT+EGHSV
Sbjct: 73 RWGRPRLDEIDPDQ-DSIVFQQIDVEEGV-DGNGHFG---------IRMYGVTQEGHSVM 121
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKV-PQFVRHIEMVQKRSIM 192
+ F PYFYI+ P+G +D++ F L N V V+ +E KR++
Sbjct: 122 ALITDFLPYFYIAVPRGFQDEDMTAFKGYL---------NQTVGSNVVQKVEKFAKRTLW 172
Query: 193 YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL-GMKSFMTYESNVLFALRFMIDC 251
Y+ FLK+ ++ P + Q GL + T+ESN++F LRFMID
Sbjct: 173 GYRGDDKVSFLKLTISDP-----------KKCQFQGLFPSEPVPTFESNIVFTLRFMIDT 221
Query: 252 NIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
+VG NWIEVP GKY+ + S+CQ+E Y IS PEG +SK+AP RILSFDI
Sbjct: 222 KVVGMNWIEVPPGKYKLVTSQHKRSHCQIELRMRYDAFISHPPEGAWSKIAPLRILSFDI 281
Query: 310 ECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
ECAGRKG FPE DPVIQ+AN+VT GE +PFIRNV L +CA IVG V++F E +
Sbjct: 282 ECAGRKGIFPEAQTDPVIQIANMVTRHGEDKPFIRNVFNLNTCANIVGSQVLTFTEEASL 341
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYLIEK----EDVHHSIISDLQNGNAETR 420
AWRDF+ EVDPDV+ GYNI FD PYL+++ E + + + L+N E +
Sbjct: 342 FQAWRDFVEEVDPDVITGYNIANFDFPYLMDRAKALEVANFNYLGRLRNVRTEVK 396
>gi|403413674|emb|CCM00374.1| predicted protein [Fibroporia radiculosa]
Length = 1060
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/621 (65%), Positives = 494/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I+DLQNG E+RRRLAVYCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 439 QKEDVHHSVITDLQNGGPESRRRLAVYCLKDAYLPQRLIDKLMCFINYTEMARVTGVPFN 498
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQSIKVLSQL RKA +IP++K GS++ YEGATV+E G+Y+ PIATLD
Sbjct: 499 YLLSRGQSIKVLSQLYRKANDDGYIIPSLKGEGSDE-QYEGATVIEPMKGYYDVPIATLD 557
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TLV + +L+L + +TP+ + FV S+ +KG+LP ILE
Sbjct: 558 FSSLYPSIMMAHNLCYTTLVDKKVIDRLHLVKDVDYIQTPNNDFFVTSSKRKGLLPTILE 617
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L+ ARKRAK DLK+ DP ++AVLDGRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT
Sbjct: 618 DLIGARKRAKVDLKKETDPFKRAVLDGRQLALKISANSVYGFTGATIGKLPCLPISSSVT 677
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK+ VE ++ G+ H+A VIYGDTDSVMV+FG + M LG +AAD+
Sbjct: 678 AYGRQMIEKTKQEVEAEYCVANGHSHDAHVIYGDTDSVMVKFGPTDLPTVMALGAQAADF 737
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ FIKPIKLEFEKVY+PYLLISKKRYAGLYWT P+K+DKMDTKGIETVRRDNC LV
Sbjct: 738 VTAKFIKPIKLEFEKVYFPYLLISKKRYAGLYWTRPDKYDKMDTKGIETVRRDNCRLVST 797
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CLHK+L+DRD+ GA +Y K I+DLL N++D+S LVITK L K DY K AHVE
Sbjct: 798 VIETCLHKMLIDRDVKGAEEYTKQIIADLLQNKVDMSQLVITKALAKA--DYAAKQAHVE 855
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++RDA +AP +GDRV YVIIK KGA AYE+SEDPIYVLENNIPIDT YYLENQ+
Sbjct: 856 LAERMKQRDAGSAPALGDRVAYVIIKGVKGAAAYEKSEDPIYVLENNIPIDTKYYLENQL 915
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----- 933
S PL+RIFEPIL + LLSGDHTR+I I+TPS G+MKFA + +C+GCK I
Sbjct: 916 SNPLMRIFEPILGEKAASLLSGDHTRTIQIATPSVGGLMKFAIKTTTCLGCKTPIRANNS 975
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+G +C++C+ R +EL+ K V+ EL+V F RLWTQCQ CQGSLHQDVLCTS+DCPIF
Sbjct: 976 VKDGAVCNNCRPRMSELFQKQVTSASELQVRFSRLWTQCQRCQGSLHQDVLCTSKDCPIF 1035
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y RKKAQKD+ +A L+R++
Sbjct: 1036 YMRKKAQKDVEDANTTLERFD 1056
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/329 (44%), Positives = 193/329 (58%), Gaps = 46/329 (13%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
WARPPLS S+ SI+FQQ+D++ N A IR+FGVT GHSV
Sbjct: 79 WARPPLSLIDESK-DSIVFQQIDVEETTDSHN---------GGAGIRMFGVTEAGHSVLA 128
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V GF PYFY++ P+G D F L N+ VR +E+V+KRS+ Y
Sbjct: 129 TVTGFLPYFYVATPRGFTESDTFAFCDHLN--------NAGSGAVVRGVELVKKRSLWGY 180
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIV 254
+ Q + P + + T+ESN+ + LRFMID +V
Sbjct: 181 KGDDWQ------LNYP--------------------LHAVPTFESNIAYTLRFMIDTRVV 214
Query: 255 GGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECA 312
G NWIE+P KY+ + K S CQ+E + +S PEG++SK+AP RILSFDIECA
Sbjct: 215 GMNWIEIPAKKYKLIRGEKKRSKCQIELTVKWDQFVSHTPEGQWSKIAPLRILSFDIECA 274
Query: 313 GRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLA 372
GRKG FPEP+ DPVIQ+AN+VT QGE +PFIRN+ TL +CA IVG V+SF+ E +L +
Sbjct: 275 GRKGIFPEPSIDPVIQIANMVTRQGENKPFIRNIFTLNTCAHIVGSQVLSFDDEGKMLDS 334
Query: 373 WRDFIREVDPDVMIGYNICKFDLPYLIEK 401
WR F+ EVDPDV+IGYN FDLPYL+++
Sbjct: 335 WRAFVEEVDPDVVIGYNSSNFDLPYLMDR 363
>gi|119482197|ref|XP_001261127.1| DNA polymerase delta large chain [Neosartorya fischeri NRRL 181]
gi|119409281|gb|EAW19230.1| DNA polymerase delta large chain [Neosartorya fischeri NRRL 181]
Length = 1105
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/621 (65%), Positives = 501/621 (80%), Gaps = 11/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 483 QKEDVHHTMITELFNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K LSQL RKA ++ LVIPN+K +++ YEGATV+E G+Y PIATLD
Sbjct: 543 FLLSRGQQVKFLSQLFRKALEQQLVIPNMK--STDEQDYEGATVIEPSRGYYGVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KL L E TP+G+ F + ++KG+L +ILE
Sbjct: 601 FASLYPSIIQAHNLCYTTLLNKNSVEKLKLKKDEDYIVTPNGDMFCTTKVRKGLLSQILE 660
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARKRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS T
Sbjct: 661 ELLAARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTT 720
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++T GY H+A+VIYGDTDSVMV+FGV +E AMKLG+EAADY
Sbjct: 721 SYGRQMIEKTKQEVEARYTIANGYSHDAKVIYGDTDSVMVKFGVTELEEAMKLGQEAADY 780
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWTNP KFDKMDTKGIETVRRDNCLLV+N
Sbjct: 781 VSSKFLKPIKLEFEKVYFPYLLINKKRYAGLYWTNPNKFDKMDTKGIETVRRDNCLLVQN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ LHKIL++RDI GA YVK TISDLL N++D+S LVITK L+K DY K AHVE
Sbjct: 841 VIETVLHKILIERDIDGAQDYVKETISDLLQNKIDMSKLVITKALSKA--DYTAKQAHVE 898
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+NQ+
Sbjct: 899 LAERMRKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDNQL 958
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+ PL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK +S
Sbjct: 959 ANPLGRIFEPILGEKKANQLLTGEHTRSISVAAPTLGGLMKFAKKTQTCMGCKKPLSGKE 1018
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +C+HC+ R ELY KT+++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1019 EMAGAVCAHCRPRIGELYTKTLTKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIF 1078
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A+ +L R++
Sbjct: 1079 YMRMKAKKDVEDAQKELSRFD 1099
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 213/363 (58%), Gaps = 35/363 (9%)
Query: 53 DEESL--ILRDIEQRQDFAS-RLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
+EE L + +DI +D S + +W RPPL + +I FQQ+D E
Sbjct: 66 EEEVLEKLTQDINGLKDSNSEKDQQWERPPLGD-FDETKDNICFQQIDA---------EE 115
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
++ G A+ R+FGVT G SV V GF+ Y YI+ P +D + LE
Sbjct: 116 GTITGGKTAV-RLFGVTEAGQSVLLHVTGFQHYLYIAAPVNFTKEDCDPYRAFLE----- 169
Query: 170 ANRNSKVPQF---VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD---RG 223
SK+ QF ++ +++ + +I +Q + +LKI V P ++ R L+ +G
Sbjct: 170 ----SKLGQFQPVIQSVQITMRENIYGFQGNQKSYYLKITVTEPKFISKVRSALENNAQG 225
Query: 224 IQLDGLGMKS---FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA--KTLSYCQL 278
+ GL + +T++ N+ + LRFMID +I G +W+E GKYR + + LS CQ+
Sbjct: 226 LNYKGLWSNADAGILTFD-NIQYLLRFMIDTDIAGMSWVEAKAGKYRLLSPREKLSNCQI 284
Query: 279 EFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGE 338
E Y D+IS P GE++KMAP RILSFDIECAGRKG FPEP HDPVIQ+AN+VT GE
Sbjct: 285 EAVIDYRDLISHPPNGEWAKMAPLRILSFDIECAGRKGIFPEPNHDPVIQIANVVTRYGE 344
Query: 339 KQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
+PFIRNV L +C+ IV ++ F+ E +L+AWRDF+ +VDPDV+IGYNI FD PYL
Sbjct: 345 SKPFIRNVFVLDTCSLIVNTQILEFDREEKMLMAWRDFLEKVDPDVIIGYNIANFDFPYL 404
Query: 399 IEK 401
+++
Sbjct: 405 LDR 407
>gi|409081586|gb|EKM81945.1| hypothetical protein AGABI1DRAFT_55049 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1089
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/621 (65%), Positives = 495/621 (79%), Gaps = 9/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L NG E+RRRLAVYCLKDAYLPQRLLDKLM NY EMARVTGVP +
Sbjct: 467 QKEDVHHSVITELYNGTPESRRRLAVYCLKDAYLPQRLLDKLMCFVNYTEMARVTGVPFN 526
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQSIKVLSQL RKA ++ VIP +K G++ YEGATV+E + G+Y+ PIATLD
Sbjct: 527 YLLSRGQSIKVLSQLFRKANEEGYVIPALKGEGTDGEAYEGATVIEPKKGYYDVPIATLD 586
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ KL+L + +TP+ + FV S +KG+LP ILE
Sbjct: 587 FSSLYPSIMMAHNLCYTTLIEGSMIEKLDLVKDVDYIQTPNNDFFVTSMKRKGLLPTILE 646
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L++ARKRAKADLK KDP +KAVLDGRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 647 DLISARKRAKADLKMEKDPFKKAVLDGRQLALKISANSVYGFTGATVGKLPCLPISSSVT 706
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK+ VE +F G++++A VIYGDTDSVMV+FG + M LG EAA++
Sbjct: 707 AYGRQMIEKTKQEVEAEFCIANGHQYDARVIYGDTDSVMVKFGQNDLAQVMALGSEAAEF 766
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVYYPYLLISKKRYAGLYWT EK+DKMD+KGIETVRRDNC LV
Sbjct: 767 VSAKFIKPIKLEFEKVYYPYLLISKKRYAGLYWTKAEKYDKMDSKGIETVRRDNCRLVST 826
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ LHK+L+DRD+ A YVK I+DLL N++D+S LVITK L+KT DY K AHVE
Sbjct: 827 VIETSLHKLLIDRDVKAAEIYVKQMIADLLQNKVDMSQLVITKALSKT--DYAGKQAHVE 884
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++RDA +AP +GDRV YVIIK KGA AYE+SEDP+YVLEN+IPIDT YYLENQ+
Sbjct: 885 LAERMKQRDAGSAPALGDRVAYVIIKGIKGAAAYEKSEDPLYVLENSIPIDTKYYLENQL 944
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL------ 932
SKPL+RIFEPIL + LLSGDHTR+I I+TP+ G+MKFA + ++C+GCK
Sbjct: 945 SKPLMRIFEPILGEKASSLLSGDHTRTIQIATPTVGGLMKFAVKTVTCLGCKTALKTNNS 1004
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
I+NG +C++C+ R +ELY K V EL+V F RLWTQCQ CQGSLHQDVLCTS+DCPIF
Sbjct: 1005 IANGAICNNCRPRISELYQKQVMSTSELQVRFARLWTQCQRCQGSLHQDVLCTSKDCPIF 1064
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y RKKAQKD +A L+R++
Sbjct: 1065 YMRKKAQKDAEDANTALERFD 1085
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 208/363 (57%), Gaps = 36/363 (9%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+W RP L Q SI+FQQ+D++ + D N IR++GVT+EGHSV
Sbjct: 72 RWGRPRLDEIDPDQ-DSIVFQQIDVEEGV-DGNGHFG---------IRMYGVTQEGHSVM 120
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKV-PQFVRHIEMVQKRSIM 192
+ F PYFYI+ P+G +D++ F L N V V+ +E + KR++
Sbjct: 121 ALITDFLPYFYIAVPRGFQDEDMTAFKGYL---------NQTVGSNVVQKVEKLAKRTLW 171
Query: 193 YYQQQKSQPFLKIVVALP-------TMVASCRGILDRG-IQLDGL-GMKSFMTYESNVLF 243
Y+ FLK+ ++ P + A + +R Q GL + T+ESN++F
Sbjct: 172 GYRGDDKVSFLKLTISDPKTSYGPSNLYAGSLRLFERAECQFQGLFPSEPVPTFESNIVF 231
Query: 244 ALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAP 301
LRFMID +VG NWIEVP GKY+ + S+CQ+E Y IS PEG +SK+AP
Sbjct: 232 TLRFMIDTKVVGMNWIEVPPGKYKLVTSQHKRSHCQIELRMRYDAFISHPPEGAWSKIAP 291
Query: 302 FRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVM 361
RILSFDIECAGRKG FPE DPVIQ+AN+VT GE +PFIRNV L +CA IVG V+
Sbjct: 292 LRILSFDIECAGRKGIFPEAQTDPVIQIANMVTRHGEDKPFIRNVFNLNTCANIVGSQVL 351
Query: 362 SFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK----EDVHHSIISDLQNGNA 417
+F E + AWRDF+ EVDPDV+ GYNI FD PYL+++ E + + + L+N
Sbjct: 352 TFTEEAPLFQAWRDFVEEVDPDVITGYNIANFDFPYLMDRAKALEVANFNYLGRLRNVRT 411
Query: 418 ETR 420
E +
Sbjct: 412 EVK 414
>gi|121716875|ref|XP_001275938.1| DNA polymerase delta large chain [Aspergillus clavatus NRRL 1]
gi|119404095|gb|EAW14512.1| DNA polymerase delta large chain [Aspergillus clavatus NRRL 1]
Length = 1105
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/622 (65%), Positives = 502/622 (80%), Gaps = 11/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 483 QKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K LSQL RKA ++ LVIPN+K +++ YEGATV+E G+Y PIATLD
Sbjct: 543 FLLSRGQQVKFLSQLFRKALEQQLVIPNMK--STDEQDYEGATVIEPIRGYYGVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KL L + TP+G+ F + ++KG+L +ILE
Sbjct: 601 FASLYPSIIQAHNLCYTTLLNKNSVEKLKLKKDDDYIVTPNGDMFCTAKVRKGLLSQILE 660
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS T
Sbjct: 661 ELLSARKRAKKELAIETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTT 720
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE K+T GY H+A+VIYGDTDSVMV+FGV +E AMKLG+EAAD+
Sbjct: 721 SYGRQMIEKTKQEVEAKYTIANGYSHDAKVIYGDTDSVMVKFGVSELEDAMKLGQEAADF 780
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWTNP+KFDKMDTKGIETVRRDNCLLV+N
Sbjct: 781 VSSKFLKPIKLEFEKVYFPYLLINKKRYAGLYWTNPKKFDKMDTKGIETVRRDNCLLVQN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ LHKIL+DRDI GA YVK TISDLL N++D+S LVITK L+K DY K AHVE
Sbjct: 841 VIETVLHKILIDRDIDGAQDYVKDTISDLLQNKVDMSKLVITKALSKA--DYTAKQAHVE 898
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+NQ+
Sbjct: 899 LAERMRKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDNQL 958
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+ PL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK +S
Sbjct: 959 ANPLGRIFEPILGEKKASQLLTGEHTRSISVAAPTLGGLMKFAKKTQTCMGCKKPLSGKE 1018
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +C HC+ R ELY +T+++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1019 EMAGAVCEHCRPRMGELYTRTLNKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIF 1078
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A+ +L R++F
Sbjct: 1079 YMRMKAKKDVEDAEKELSRFDF 1100
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/336 (41%), Positives = 200/336 (59%), Gaps = 26/336 (7%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+W RPPL + + ++I FQQ+D E ++ G A+ R+FGVT G SV
Sbjct: 90 QWERPPLGD-FDAAKENICFQQIDA---------EEGTITGGKTAV-RLFGVTEIGQSVL 138
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
V GF+ Y YI+ P +D + LE ++ ++ +++ + +I
Sbjct: 139 LHVTGFQHYLYIAAPVNFTKEDCDPYRAFLESKL------GHFQPVIQSVQITMRENIYG 192
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILD---RGIQLDGLGMKS---FMTYESNVLFALRF 247
+Q + +LKI V P ++ RG L+ +G+ GL + +T++ N+ + LRF
Sbjct: 193 FQGNQKSYYLKITVTEPKFISKVRGALEHNSQGLNYKGLWSSADAGILTFD-NIQYLLRF 251
Query: 248 MIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRIL 305
MID +I G +W+E GKYR + LS CQ+E Y D+IS P GE++KMAP RIL
Sbjct: 252 MIDTDISGMSWVEAKAGKYRLLDGREKLSNCQIEAVIDYRDLISHPPNGEWAKMAPLRIL 311
Query: 306 SFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFET 365
SFDIECAGRKG FPEP HDPVIQ+AN+VT GE +PFIRNV L +C+ IV V+ F+
Sbjct: 312 SFDIECAGRKGIFPEPNHDPVIQIANVVTRYGESKPFIRNVFVLDTCSLIVNTQVLEFDK 371
Query: 366 ERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E +L+AWRDF+ +VDPDV+IGYNI FD PYL+++
Sbjct: 372 EEKMLMAWRDFLEKVDPDVIIGYNIANFDFPYLLDR 407
>gi|170104866|ref|XP_001883646.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641281|gb|EDR05542.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1064
Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/621 (64%), Positives = 495/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQNG E+RRRLAVYCLKDAYLPQRLLDKLM NY+EMARVTGVP +
Sbjct: 443 QKEDVHHSVITELQNGTPESRRRLAVYCLKDAYLPQRLLDKLMCFVNYIEMARVTGVPFN 502
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQSIKVLSQL RKA + V+P++K GS++ YEGATV+E + G+Y+ PIATLD
Sbjct: 503 YLLSRGQSIKVLSQLFRKANDEGYVVPSMKGEGSDE-QYEGATVIEPKKGYYDVPIATLD 561
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ +L L + +TP+ + F + +KG+LP ILE
Sbjct: 562 FSSLYPSIMMAHNLCYTTLLDKATIDRLGLVKDVDYIQTPNNDLFATTKKRKGLLPTILE 621
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L++ARKRAKADLK+ DP +KAVLDGRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT
Sbjct: 622 DLISARKRAKADLKKETDPFKKAVLDGRQLALKISANSVYGFTGATIGKLPCLAISSSVT 681
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++ G+ H+AE+IYGDTDSVMV+FG + M LG EAAD
Sbjct: 682 SYGRQMIEKTKQEVEAEYCIANGHTHDAEIIYGDTDSVMVRFGPNDLAKVMALGIEAADL 741
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ F+KPIKLEFEKVYYPYLLISKKRYAGLYWT +K+DKMD+KGIETVRRDNC LV
Sbjct: 742 VTAKFVKPIKLEFEKVYYPYLLISKKRYAGLYWTKVDKYDKMDSKGIETVRRDNCRLVST 801
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CLHK+L+DRD+ A Y K TI+DLL N++D+S LVITK L+KT DY K AH E
Sbjct: 802 VIETCLHKMLIDRDVRSAEDYTKQTIADLLQNKVDMSQLVITKALSKT--DYAGKQAHAE 859
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++RDA +AP +GDRV YVIIK KGA AYE+SEDP+YVLENN+PIDT YYLENQ+
Sbjct: 860 LAERMKQRDAGSAPALGDRVAYVIIKGIKGAAAYEKSEDPLYVLENNLPIDTKYYLENQL 919
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKA------L 932
SKPL+RIFEPIL + LLSGDHTR+I I+TP+ G+MKFA + ++C+GCK
Sbjct: 920 SKPLMRIFEPILGEKASSLLSGDHTRTIQIATPTVGGLMKFAVKTITCLGCKTPLRATNS 979
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+ NG LC++C+ R AE+Y K VS +L+V F RLWTQCQ CQGSLHQDVLCTS+DCPIF
Sbjct: 980 VKNGALCNNCRPRMAEMYHKQVSTTSDLQVRFSRLWTQCQRCQGSLHQDVLCTSKDCPIF 1039
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y RKKAQKD+ +A L R++
Sbjct: 1040 YMRKKAQKDVEDANAVLQRFD 1060
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/376 (47%), Positives = 220/376 (58%), Gaps = 36/376 (9%)
Query: 54 EESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLS 113
EE+ L D+E D KWARPPL + SI+FQQ+DID GD
Sbjct: 42 EEAAGLEDVEGGAD------KWARPPLRK-MNEKKDSIVFQQIDIDET-GD--------- 84
Query: 114 SGSAAI-IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANR 172
GS I +R+FGVT +GHSV V F PYFYI P+G DI F Q L
Sbjct: 85 -GSGGIELRMFGVTEDGHSVLAHVTDFPPYFYIGVPRGFQDGDIESFRQYL--------- 134
Query: 173 NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG--ILDRGIQLDGLG 230
NS VR IE V KR++ Y+ PFLK ++ P + R L GL
Sbjct: 135 NSVTQGCVRRIERVSKRTLWGYRGDDWIPFLKFIITEPRSLPKVRDEYPLRGECDFQGLF 194
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA--KTLSYCQLEFDCLYSDII 288
T+ESN+ + LRFMID +VG NWIEVP GKY + K S CQLEF Y I
Sbjct: 195 NDVVPTFESNIAYTLRFMIDTKVVGMNWIEVPAGKYNIYSPDKKRSTCQLEFGMRYDAFI 254
Query: 289 SRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMT 348
S PEG++SK+AP RILSFDIECAGRKG FPE + DPVIQ+AN+VT+QGE +PFIRNV T
Sbjct: 255 SHAPEGDWSKIAPLRILSFDIECAGRKGIFPEASVDPVIQIANMVTIQGEHKPFIRNVFT 314
Query: 349 LKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSI 408
L SC+ IVG V+SF+ E +L +WRDF+ +VDPDV+IGYNI FD PYL+++ +I
Sbjct: 315 LNSCSHIVGSQVLSFDDEAKMLHSWRDFVEQVDPDVVIGYNIAGFDFPYLMDRAKAIKAI 374
Query: 409 ----ISDLQNGNAETR 420
+ L+N ET+
Sbjct: 375 KFPYLGKLKNVKVETK 390
>gi|405951999|gb|EKC19859.1| DNA polymerase delta catalytic subunit [Crassostrea gigas]
Length = 1090
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/618 (66%), Positives = 489/618 (79%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA LP RLLDKLM + NY+EMARVTGVP+
Sbjct: 471 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAILPLRLLDKLMCVINYMEMARVTGVPLP 530
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
+LLSRGQ +KV+SQLLRKAK+++LV+P K + G E YEGATV+E GFY+ PIATL
Sbjct: 531 YLLSRGQQVKVVSQLLRKAKEQDLVLPTHKVETGDE---YEGATVIEPVKGFYDSPIATL 587
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DF+SLYPSIMMA+NLCY+TL++ +K L P+ KTPSG F+K+ +KG+LPEILE
Sbjct: 588 DFSSLYPSIMMAHNLCYTTLLSQHSIQKEGLTPDQYIKTPSGNYFIKTQHRKGLLPEILE 647
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL+ARK+AKADLK+ DP +K VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 648 HLLSARKKAKADLKKETDPFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVT 707
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GR MIE TK VE+ +T GY+H+A+VIYGDTDSVM +FGV TV AMKLG+EAAD
Sbjct: 708 AFGRMMIEQTKTYVEEHYTIANGYQHDAKVIYGDTDSVMCKFGVGTVAEAMKLGQEAADL 767
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
IS FIKPIKLEFEKVY+PYLLI+KKRYAGLYWTNPEK DKMD KGIETVRRDN LV N
Sbjct: 768 ISEKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTNPEKHDKMDCKGIETVRRDNSPLVAN 827
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL IL++RD GAV+Y K ISDLL NR+D+S LVITK LTKTGD+Y K AHVE
Sbjct: 828 LINTCLQLILINRDPQGAVEYAKQAISDLLCNRIDISQLVITKELTKTGDEYAGKQAHVE 887
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA RM+KRD +AP +GDRVPYVII KG+ AY SEDPIYVLENNI IDT YYLENQ+
Sbjct: 888 LAHRMKKRDPGSAPQLGDRVPYVIIAGTKGSAAYMNSEDPIYVLENNIAIDTQYYLENQL 947
Query: 879 SKPLLRIFEPIL--KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG 936
SKPLLRIFEPIL K A ELL GDHTR+ + G+M FAK++ +CIGC+ ++
Sbjct: 948 SKPLLRIFEPILGEKKAESELLRGDHTRTKTKVASKVGGLMAFAKKKATCIGCRTVLQED 1007
Query: 937 --TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+C +CK +E+E+Y K +S + LE F RLWTQCQ CQGSLH+DVLCTSRDCPIFY
Sbjct: 1008 GIAVCKYCKPKESEIYQKEISHLNILEEKFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYM 1067
Query: 995 RKKAQKDMAEAKLQLDRW 1012
RKK QKD+A+ L R+
Sbjct: 1068 RKKVQKDLADQDKLLHRF 1085
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/341 (45%), Positives = 212/341 (62%), Gaps = 11/341 (3%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
KW RPPL + ++FQQ+D+D+ IG + + G +IR++GVT G+SV
Sbjct: 58 TKWCRPPLPKMKADK-DKLIFQQIDVDHYIGRHLPGMPGATQGPVPVIRMYGVTLNGNSV 116
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRS 190
+HGF PYF++ QG + F + L+ +R R+++ + V ++ V K S
Sbjct: 117 LAHIHGFAPYFFVPAQQGFKREHCEQFRKHLDSVVRGDLRSNREEIQTAVLAVDFVMKES 176
Query: 191 IMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALR--FM 248
I Y K PFLKI VA+P ++A + +L++G G F YESN+ F +R FM
Sbjct: 177 IYGYHGNKKIPFLKITVAIPRLIAPAKRLLEQGFTCPGYSSNGFQAYESNIDFEVRQEFM 236
Query: 249 IDCNIVGGNWIEVPVGKYRKTAK------TLSYCQLEFDCLYSDIISRHPEGEFSKMAPF 302
+D ++VG +WIE+P GKYR K S CQ+E D + D IS PEGE+S MAPF
Sbjct: 237 VDTDVVGCSWIEIPAGKYRIRTKDDPKFPVKSRCQMEVDVSWEDFISHVPEGEWSAMAPF 296
Query: 303 RILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMS 362
RILS+DIECAGRKG FPEP DPVIQ+AN+V QGE+ PFIRNV TL+SCAP+VG V+S
Sbjct: 297 RILSYDIECAGRKGVFPEPDKDPVIQIANMVIRQGERDPFIRNVFTLRSCAPVVGSQVIS 356
Query: 363 FETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
E E D+L W +F+R VDPD++ GYNI FD PY+I + +
Sbjct: 357 NEKESDLLKKWAEFVRVVDPDIITGYNIQNFDFPYVINRAN 397
>gi|392589878|gb|EIW79208.1| hypothetical protein CONPUDRAFT_138364 [Coniophora puteana RWD-64-598
SS2]
Length = 1096
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/621 (64%), Positives = 493/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQNG E+RRRLAVYCLKDAYLPQRL+DKLM NY+EMARVTGVP +
Sbjct: 475 QKEDVHHSVITELQNGGPESRRRLAVYCLKDAYLPQRLMDKLMCFVNYIEMARVTGVPFN 534
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQSIKVLSQL R+A ++ IP K GS++ YEGATV+E + G+Y+ PIATLD
Sbjct: 535 YLLSRGQSIKVLSQLYRRANEEGYAIPAFKGEGSDE-QYEGATVIEPKKGYYDAPIATLD 593
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ + +L L + +TP+ + F + ++KG+LP ILE
Sbjct: 594 FSSLYPSIMMAHNLCYTTLLDKKTIDRLELVKDVDYIQTPNNDFFATAKMRKGLLPSILE 653
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L+ ARKRAKADLK+ D ++AVLDGRQLALKISANSVYGFTGAT+G+LPC+ ISSS T
Sbjct: 654 DLIGARKRAKADLKKETDTFKRAVLDGRQLALKISANSVYGFTGATIGKLPCLPISSSTT 713
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE +F G+ HNAEVIYGDTDSVMV+FG + M +G +AAD+
Sbjct: 714 SYGRQMIEKTKQEVEAEFCIANGHAHNAEVIYGDTDSVMVKFGPSDLREVMAMGAQAADF 773
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ FIKPIKLEFEKVY+PYLLISKKRYAGLYWT PEK+DKMD+KGIETVRRDNC LV
Sbjct: 774 VTAKFIKPIKLEFEKVYFPYLLISKKRYAGLYWTKPEKYDKMDSKGIETVRRDNCRLVST 833
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CLHK+L+DRD+ GA Y K ISDLL+N++D+S LVITK L K DY K AHVE
Sbjct: 834 VIETCLHKMLIDRDVKGAEDYTKKMISDLLLNKVDMSQLVITKALAKA--DYAAKQAHVE 891
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMR+RDA +AP +GDRV YVIIK KGA AYE+SEDP++VLENNIPIDT YYLENQ+
Sbjct: 892 LAERMRQRDAGSAPALGDRVAYVIIKGMKGAAAYEKSEDPLFVLENNIPIDTKYYLENQL 951
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL------ 932
SKPL+RIFEPIL + LL+G+HTR+I I+TPS G+MKFA + ++C+GCK
Sbjct: 952 SKPLMRIFEPILGEKANSLLAGEHTRTIQIATPSVGGLMKFAVKTVTCLGCKTQLRPNNS 1011
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+ NG +C++C+ R ELY K + Q + +V F RLWTQCQ CQGSLHQDVLC+S+DCPIF
Sbjct: 1012 VKNGAVCNNCRPRIGELYQKQIMQASQSQVRFSRLWTQCQRCQGSLHQDVLCSSKDCPIF 1071
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y RKKAQKD+ +A L+R++
Sbjct: 1072 YMRKKAQKDVEDANAVLERFD 1092
Score = 290 bits (741), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 157/333 (47%), Positives = 201/333 (60%), Gaps = 22/333 (6%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
WARP L S+ +I+FQQLD++ D S+G+ + R++GVT GHSVC
Sbjct: 83 WARPQLPPINESK-DTIVFQQLDVEEGFHDR-------SNGTVGL-RMYGVTEGGHSVCA 133
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANR-NSKVPQFVRHIEMVQKRSIMY 193
+ F PYFYI P+G DDI F E NR + P V IE VQ+RS+
Sbjct: 134 TITHFAPYFYIPAPRGFTNDDIDAFKD-------ELNRLVGQEPDAVMRIEPVQRRSLWG 186
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGL--GMKSFMTYESNVLFALRFMID 250
++ FLKI P V RG+ +RG Q L + + T+ESNV + LRFMID
Sbjct: 187 FRGDDWVSFLKIFTLEPKAVPKVRGLFERGECQFRDLFAAGEVYPTFESNVAYVLRFMID 246
Query: 251 CNIVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
+VG NWIE+P GKY+ + S CQLE + IS P+G++ +AP R+LSFD
Sbjct: 247 TKVVGMNWIEIPAGKYKLVPQKDKKSTCQLELTTRHDSFISHPPDGKWQTIAPLRVLSFD 306
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPE DPVIQ+AN+VT+QGE QPFIRN+ TL +C+ IVG VMSF E +
Sbjct: 307 IECAGRKGIFPEAQVDPVIQIANMVTIQGESQPFIRNIFTLNTCSHIVGSQVMSFNDEAE 366
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW FI EVDPDV+IGYNI FD PYL ++
Sbjct: 367 MLNAWSQFIAEVDPDVIIGYNISNFDFPYLFDR 399
>gi|321264115|ref|XP_003196775.1| delta DNA polymerase [Cryptococcus gattii WM276]
gi|317463252|gb|ADV24988.1| Delta DNA polymerase, putative [Cryptococcus gattii WM276]
Length = 1049
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/617 (65%), Positives = 488/617 (79%), Gaps = 7/617 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++LQNG A++RRRLAVYCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 430 QKEDVHHSIITELQNGTADSRRRLAVYCLKDAYLPQRLMDKLMCFVNYTEMARVTGVPFN 489
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL R A VIP +K GS++ YEGATV+E GFY+ PIATLD
Sbjct: 490 YLLSRGQQIKVVSQLYRNAADAGYVIPALKSEGSDE-QYEGATVIEPSKGFYDVPIATLD 548
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+NLCY+TL+ +L L + TP+ + F S +KG+LP ILE
Sbjct: 549 FASLYPSIMMAHNLCYTTLLDKGTIERLKLVEGQDYVHTPNNDFFATSKRRKGLLPHILE 608
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LLAARKRAK DLK KDP ++AVLDGRQLALK+SANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 609 NLLAARKRAKQDLKVEKDPFKRAVLDGRQLALKVSANSVYGFTGATVGKLPCLAISSSVT 668
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TKK VE +++ GY+H+A+V+YGDTDSVMV+FG P + AM+LG EAAD
Sbjct: 669 AYGRQMIELTKKEVEAQYSMKNGYDHDAKVVYGDTDSVMVRFGCPDLPTAMRLGAEAADL 728
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+SG FIKPIKLEFEKVY+PYLLISKKRYAGLYWT PEK+DKMDTKGIETVRRDNC LV
Sbjct: 729 VSGKFIKPIKLEFEKVYFPYLLISKKRYAGLYWTRPEKYDKMDTKGIETVRRDNCRLVST 788
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DRD+ GA YVK TI+DLL N++D+S LVITK L K DY K AHVE
Sbjct: 789 VIETCLFKMLIDRDVKGAEDYVKDTIADLLQNKIDMSQLVITKALAKA--DYAAKQAHVE 846
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L ERMRKRDA +AP++GDRV YVI+K KGA AYE+SEDP+YVLE+N+PIDT YYLENQ+
Sbjct: 847 LVERMRKRDAGSAPSLGDRVAYVIVKGVKGAAAYEKSEDPLYVLEHNVPIDTRYYLENQL 906
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
SKPL+RIFEPIL + LL GDHTR+I I+TP+ G+MKFA + ++C+GCK + +
Sbjct: 907 SKPLMRIFEPILGEKANSLLHGDHTRTIQIATPTIGGLMKFAVKTVTCMGCKTPLRGKNE 966
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C +C+ + ELY K V+Q L++ F RLWTQCQ CQGSLHQDV+CTS DCPIFYRR
Sbjct: 967 SAVCVNCRPKLPELYQKQVAQTSALQIDFARLWTQCQRCQGSLHQDVICTSADCPIFYRR 1026
Query: 996 KKAQKDMAEAKLQLDRW 1012
QK++A + QLDR+
Sbjct: 1027 TARQKEVASSVAQLDRF 1043
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 202/350 (57%), Gaps = 31/350 (8%)
Query: 58 ILRDIEQRQDFAS----RLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLS 113
+L +E +D A A W RPP+ + ++ ++I FQQ++I+ +
Sbjct: 30 VLEQLEAEEDAAGDSIETSASWPRPPVLP-FDAEKETISFQQIEIEESTDPKH------- 81
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
+R+FGV + G+SV VHGF+PYFY++ P G D+ + +
Sbjct: 82 ---GPTLRLFGVNKSGNSVLAHVHGFKPYFYVAAPSGFLNKDLQPLADAINSSI------ 132
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
S + V + + +RS+ Y+ + PF+KI V+ P ++ I +GL
Sbjct: 133 SAMGPCVTNCAIFNRRSLWGYRGDDTVPFIKITVSDPRSLSK--------IDFNGLFPPE 184
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRH 291
+TYESN+ + +RFMID IVG NW+ +P G+Y + S+CQ E C Y D+IS
Sbjct: 185 ILTYESNIAYTMRFMIDTKIVGMNWVSIPGGRYDLLEGGNKKSHCQTEISCNYKDLISHA 244
Query: 292 PEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKS 351
PE E+ +AP R+LSFDIECAGRKG FPE DPVIQ+A +VT GE +PFIRNV TL +
Sbjct: 245 PENEWLNIAPLRVLSFDIECAGRKGIFPEANVDPVIQIAAMVTRHGESKPFIRNVFTLNT 304
Query: 352 CAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
CA IVG V+ F+ ER +LL WR F+ VDPD++IGYNI FDLPYL+++
Sbjct: 305 CAHIVGSQVLEFKDERQLLLEWRKFVEAVDPDMIIGYNISNFDLPYLLDR 354
>gi|134117391|ref|XP_772922.1| hypothetical protein CNBK2930 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255540|gb|EAL18275.1| hypothetical protein CNBK2930 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1059
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/617 (65%), Positives = 488/617 (79%), Gaps = 7/617 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++LQNG A++RRRLAVYCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 440 QKEDVHHSIITELQNGTADSRRRLAVYCLKDAYLPQRLMDKLMCFVNYTEMARVTGVPFN 499
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL R A VIP +K GS++ YEGATV+E GFY+ PIATLD
Sbjct: 500 YLLSRGQQIKVISQLYRNAADAGYVIPALKSEGSDE-QYEGATVIEPSKGFYDVPIATLD 558
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+NLCY+TL+ +L L E TP+ + F S +KG+LP ILE
Sbjct: 559 FASLYPSIMMAHNLCYTTLLDKGTIERLKLVEGEDYVHTPNNDFFATSKRRKGLLPHILE 618
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LLAARKRAK DLK KDP ++AVLDGRQLALK+SANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 619 NLLAARKRAKQDLKVEKDPFKRAVLDGRQLALKVSANSVYGFTGATVGKLPCLAISSSVT 678
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TKK VE +++ GY+H+A+++YGDTDSVMV+FG P + AM+LG EAAD
Sbjct: 679 AYGRQMIELTKKEVEAEYSMKNGYDHDAKIVYGDTDSVMVRFGCPDLPTAMRLGAEAADL 738
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+SG FIKPIKLEFEKVY+PYLLISKKRYAGLYWT PEK+DKMDTKGIETVRRDNC LV
Sbjct: 739 VSGKFIKPIKLEFEKVYFPYLLISKKRYAGLYWTRPEKYDKMDTKGIETVRRDNCRLVST 798
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DRD+ GA YVK TI+DLL N++D+S LVITK L K DY K AHVE
Sbjct: 799 VIETCLFKMLIDRDVKGAEDYVKDTIADLLQNKIDMSQLVITKALAKA--DYAAKQAHVE 856
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L ERMRKRDA +AP++GDRV YVI+K KGA AYE+SEDP+YVLE+N+PIDT YYLENQ+
Sbjct: 857 LVERMRKRDAGSAPSLGDRVAYVIVKGVKGAAAYEKSEDPLYVLEHNVPIDTRYYLENQL 916
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
SKPL+RIFEPIL + LL GDHTR+I I+TP+ G+MKFA + ++C+GC+ + +
Sbjct: 917 SKPLMRIFEPILGEKANSLLHGDHTRTIQIATPTIGGLMKFAVKTVTCMGCRTPLRGKNE 976
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C +C+ + ELY K V+Q L++ F RLWTQCQ CQGSLHQDV+CTS DCPIFYRR
Sbjct: 977 SAVCVNCRPKLPELYQKQVAQTSALQIDFARLWTQCQRCQGSLHQDVICTSADCPIFYRR 1036
Query: 996 KKAQKDMAEAKLQLDRW 1012
QK++A + QLDR+
Sbjct: 1037 TARQKEVASSVAQLDRF 1053
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 208/368 (56%), Gaps = 25/368 (6%)
Query: 42 DVFLDETLLPEDEESLILRDIEQRQDFAS----RLAKWARPPLSSGYVSQCQSIMFQQLD 97
D+ + L P+ + +L + +D A A W RPP+ + ++ +I FQQ++
Sbjct: 14 DISSQKELEPQPSFTEVLEQLVAEEDAAGDSIETSAAWPRPPVPP-FDAKKDTISFQQIE 72
Query: 98 IDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS 157
I+ + +R+FGV + G+SV V+GF+PYFY++ P G D+
Sbjct: 73 IEESADPKH----------GPTLRLFGVNKSGNSVLAHVYGFKPYFYVAAPSGFLNKDLQ 122
Query: 158 HFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCR 217
+ + S + V + + +RS+ Y+ + PF+KI V+ P ++ +
Sbjct: 123 PLADKINSSI------SALGPCVTNCAIFNRRSLWGYRGDDTVPFIKITVSDPKNLSKVK 176
Query: 218 G--ILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTL 273
I +GL +TYESN+ + +RFMID IVG NW+ +P G+Y +
Sbjct: 177 DEFFTLSTIDFNGLFPPEILTYESNIAYTMRFMIDTKIVGMNWVSIPGGRYDLLEGGSKK 236
Query: 274 SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLV 333
S CQ+E C Y D+IS PE E+ +AP R+LSFDIECAGRKG FPE DPVIQ+A +V
Sbjct: 237 SQCQIEISCNYKDLISHPPENEWLDIAPLRVLSFDIECAGRKGIFPEANVDPVIQIAAMV 296
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
T GE +PFIRNV TL +CA IVG V+ F+ ER +LL WR F+ VDPD++IGYNI F
Sbjct: 297 TRHGESKPFIRNVFTLNTCAHIVGSQVLEFKDERQLLLEWRKFVDTVDPDMIIGYNISNF 356
Query: 394 DLPYLIEK 401
DLPYL+++
Sbjct: 357 DLPYLLDR 364
>gi|58260420|ref|XP_567620.1| delta DNA polymerase [Cryptococcus neoformans var. neoformans JEC21]
gi|57229701|gb|AAW46103.1| delta DNA polymerase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1058
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/617 (65%), Positives = 488/617 (79%), Gaps = 7/617 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++LQNG A++RRRLAVYCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 439 QKEDVHHSIITELQNGTADSRRRLAVYCLKDAYLPQRLMDKLMCFVNYTEMARVTGVPFN 498
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL R A VIP +K GS++ YEGATV+E GFY+ PIATLD
Sbjct: 499 YLLSRGQQIKVISQLYRNAADAGYVIPALKSEGSDE-QYEGATVIEPSKGFYDVPIATLD 557
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+NLCY+TL+ +L L E TP+ + F S +KG+LP ILE
Sbjct: 558 FASLYPSIMMAHNLCYTTLLDKGTIERLKLVEGEDYVHTPNNDFFATSKRRKGLLPHILE 617
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LLAARKRAK DLK KDP ++AVLDGRQLALK+SANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 618 NLLAARKRAKQDLKVEKDPFKRAVLDGRQLALKVSANSVYGFTGATVGKLPCLAISSSVT 677
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TKK VE +++ GY+H+A+++YGDTDSVMV+FG P + AM+LG EAAD
Sbjct: 678 AYGRQMIELTKKEVEAEYSMKNGYDHDAKIVYGDTDSVMVRFGCPDLPTAMRLGAEAADL 737
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+SG FIKPIKLEFEKVY+PYLLISKKRYAGLYWT PEK+DKMDTKGIETVRRDNC LV
Sbjct: 738 VSGKFIKPIKLEFEKVYFPYLLISKKRYAGLYWTRPEKYDKMDTKGIETVRRDNCRLVST 797
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DRD+ GA YVK TI+DLL N++D+S LVITK L K DY K AHVE
Sbjct: 798 VIETCLFKMLIDRDVKGAEDYVKDTIADLLQNKIDMSQLVITKALAKA--DYAAKQAHVE 855
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L ERMRKRDA +AP++GDRV YVI+K KGA AYE+SEDP+YVLE+N+PIDT YYLENQ+
Sbjct: 856 LVERMRKRDAGSAPSLGDRVAYVIVKGVKGAAAYEKSEDPLYVLEHNVPIDTRYYLENQL 915
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
SKPL+RIFEPIL + LL GDHTR+I I+TP+ G+MKFA + ++C+GC+ + +
Sbjct: 916 SKPLMRIFEPILGEKANSLLHGDHTRTIQIATPTIGGLMKFAVKTVTCMGCRTPLRGKNE 975
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C +C+ + ELY K V+Q L++ F RLWTQCQ CQGSLHQDV+CTS DCPIFYRR
Sbjct: 976 SAVCVNCRPKLPELYQKQVAQTSALQIDFARLWTQCQRCQGSLHQDVICTSADCPIFYRR 1035
Query: 996 KKAQKDMAEAKLQLDRW 1012
QK++A + QLDR+
Sbjct: 1036 TARQKEVASSVAQLDRF 1052
Score = 279 bits (713), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 145/367 (39%), Positives = 212/367 (57%), Gaps = 24/367 (6%)
Query: 42 DVFLDETLLPEDEESLILRDIEQRQDFAS----RLAKWARPPLSSGYVSQCQSIMFQQLD 97
D+ + L P+ + +L + +D A A W RPP+ + ++ +I FQQ++
Sbjct: 14 DISSQKELEPQPSFTEVLEQLVAEEDAAGDSIETSAAWPRPPVPP-FDAKKDTISFQQIE 72
Query: 98 IDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS 157
I+ + +R+FGV + G+SV V+GF+PYFY++ P G D+
Sbjct: 73 IEESADPKH----------GPTLRLFGVNKSGNSVLAHVYGFKPYFYVAAPSGFLNKDLQ 122
Query: 158 HFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCR 217
+ + S + V + + +RS+ Y+ + PF+KI V+ P ++ +
Sbjct: 123 PLADKINSSI------SALGPCVTNCAIFNRRSLWGYRGDDTVPFIKITVSDPKNLSKVK 176
Query: 218 GILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLS 274
G +RG I +GL +TYESN+ + +RFMID IVG NW+ +P G+Y + S
Sbjct: 177 GAFERGQIDFNGLFPPEILTYESNIAYTMRFMIDTKIVGMNWVSIPGGRYDLLEGGSKKS 236
Query: 275 YCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVT 334
CQ+E C Y D+IS PE E+ +AP R+LSFDIECAGRKG FPE DPVIQ+A +VT
Sbjct: 237 QCQIEISCNYKDLISHPPENEWLDIAPLRVLSFDIECAGRKGIFPEANVDPVIQIAAMVT 296
Query: 335 LQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFD 394
GE +PFIRNV TL +CA IVG V+ F+ ER +LL WR F+ VDPD++IGYNI FD
Sbjct: 297 RHGESKPFIRNVFTLNTCAHIVGSQVLEFKDERQLLLEWRKFVDTVDPDMIIGYNISNFD 356
Query: 395 LPYLIEK 401
LPYL+++
Sbjct: 357 LPYLLDR 363
>gi|156407049|ref|XP_001641357.1| predicted protein [Nematostella vectensis]
gi|156228495|gb|EDO49294.1| predicted protein [Nematostella vectensis]
Length = 1092
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/617 (66%), Positives = 491/617 (79%), Gaps = 8/617 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H+IISDLQNGN +TRRRLA+YC+KDA LP RLL+KLM + NY+EMARVTGVP+
Sbjct: 475 QKEDVQHNIISDLQNGNDQTRRRLAIYCMKDAILPLRLLEKLMCVINYMEMARVTGVPMG 534
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQLLRK Q +LVIP K E+ Y GATV+E G+Y PIATLD
Sbjct: 535 YLLSRGQQIKVMSQLLRKTHQTDLVIPAHKAEAGEE--YAGATVIEPNKGYYNIPIATLD 592
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY++L+ P ++ PP+ KTPSG FVK +++KG+LPEILE
Sbjct: 593 FSSLYPSIMMAHNLCYTSLLHPSQVKET--PPDQYIKTPSGNFFVKKSVRKGLLPEILEH 650
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLK+ DP +K VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 651 LLTARKKAKADLKKETDPFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTA 710
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MIE TK+LVE K+T GY+ +A+VIYGDTDSVMV+FGV TV +M+LG EAA+Y+
Sbjct: 711 FGRMMIERTKELVEAKYTVANGYKTDAKVIYGDTDSVMVRFGVETVAESMELGNEAAEYV 770
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F+KPIKLEFEKVY+PYLLISKKRYAGLY+T P+K DKMD KGIETVRRDNC LV NL
Sbjct: 771 SEHFVKPIKLEFEKVYFPYLLISKKRYAGLYFTKPDKHDKMDCKGIETVRRDNCPLVANL 830
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L++R+ GAV+Y K ISDLL NR+D+S LVITK LTKTG++Y K AH EL
Sbjct: 831 INACLKKLLIERNPQGAVEYTKQVISDLLCNRIDISQLVITKELTKTGEEYAGKQAHSEL 890
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRDA +AP +GDRVPYVII AKGAKAYE++EDPIYVLENN+PIDT YYLENQ+S
Sbjct: 891 AERMRKRDAGSAPKLGDRVPYVIIAGAKGAKAYEKAEDPIYVLENNVPIDTGYYLENQLS 950
Query: 880 KPLLRIFEPIL--KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
KPLLRIFEPIL AS LL G+HTR+ +I T + + F K++ +CIGCKAL+ +
Sbjct: 951 KPLLRIFEPILGESKASSALLKGEHTRTKTIVTSTVGKLSMFTKKRSTCIGCKALLDDDG 1010
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C HCK RE+EL+ K + ++ LE F RLWTQCQ C GSLHQDVLCTSRDCPIFY R
Sbjct: 1011 SAVCKHCKSRESELFQKEIEHLRVLEERFARLWTQCQNCTGSLHQDVLCTSRDCPIFYMR 1070
Query: 996 KKAQKDMAEAKLQLDRW 1012
K QKD+A Q+ R+
Sbjct: 1071 TKVQKDLANQDKQVSRF 1087
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 158/347 (45%), Positives = 212/347 (61%), Gaps = 15/347 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW RP L + +I FQQLD++ IG + G IIR+FGVT +G+SV
Sbjct: 59 KWPRPALPP-FEPASDNIQFQQLDVENYIGTPLLGMPGSKVGPVPIIRMFGVTMDGNSVL 117
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C +HGF PYF++ P G S F L+ + R+++ V Q V ++ + + SI
Sbjct: 118 CHIHGFVPYFFVPAPPGFQEIHCSLFRDTLDKAVLNDMRSNRDGVTQAVLAVDYMMRESI 177
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y + PFLK+ VAL ++A + IL+ G + + + TYESN+ + +RFM+D
Sbjct: 178 YGYHKNTKIPFLKVTVALQKLIAPAKRILETGFRCGHYPERGYSTYESNIDYEVRFMVDS 237
Query: 252 NIVGGNWIEVPVGKYR------------KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKM 299
+IVG NWIE+P GKYR +AK S CQLE D + ++IS PEG++SK+
Sbjct: 238 DIVGCNWIELPAGKYRVRTPNGIASRYRSSAKPESRCQLEVDVAWDELISHEPEGDWSKI 297
Query: 300 APFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVD 359
AP RILSFDIECAGRKG FPE DPVIQ+AN+V QGEK PFIRNV TL CAPIVG
Sbjct: 298 APVRILSFDIECAGRKGIFPEAEKDPVIQIANMVIRQGEKDPFIRNVFTLGGCAPIVGSH 357
Query: 360 VMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHH 406
V+SF+ E D+ AW +F++E DPD++ GYNI FDLPYL+ + H
Sbjct: 358 VLSFDKEADLFKAWSEFVQECDPDIITGYNIVNFDLPYLLNRATALH 404
>gi|71002632|ref|XP_755997.1| DNA polymerase delta catalytic subunit Cdc2 [Aspergillus fumigatus
Af293]
gi|66853635|gb|EAL93959.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
fumigatus Af293]
gi|159130051|gb|EDP55165.1| DNA polymerase delta large chain [Aspergillus fumigatus A1163]
Length = 1105
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/622 (64%), Positives = 501/622 (80%), Gaps = 11/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 483 QKEDVHHTMITELFNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K LSQL RKA ++ LVIPN+K +++ YEGATV+E G+Y PIATLD
Sbjct: 543 FLLSRGQQVKFLSQLFRKALEQQLVIPNIK--STDEQDYEGATVIEPIRGYYGVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KL L E TP+G+ F + ++KG+L +ILE
Sbjct: 601 FASLYPSIIQAHNLCYTTLLNKNIVEKLKLKKDEDYIVTPNGDMFCTTKVRKGLLSQILE 660
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARKRAK +L DP +KAVL+GRQLALK+SANSVYG TGATVG+LPC+ I+SS T
Sbjct: 661 ELLAARKRAKKELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATVGKLPCLPIASSTT 720
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++T GY H+A+VIYGDTDSVMV+FGV +E AMKLG+EAADY
Sbjct: 721 SYGRQMIEKTKQEVEARYTIANGYSHDAKVIYGDTDSVMVKFGVTELEEAMKLGQEAADY 780
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F KPIKLEFEKVY+PYLLI+KKRYAGLYWTNP+KFDKMDTKGIETVRRDNCLLV+N
Sbjct: 781 VSSKFPKPIKLEFEKVYFPYLLINKKRYAGLYWTNPKKFDKMDTKGIETVRRDNCLLVQN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ LHKIL++RDI GA YVK TISDLL N++D+S LVITK L+K DY K AHVE
Sbjct: 841 VIETVLHKILIERDIDGAQDYVKETISDLLQNKIDMSKLVITKALSKA--DYTAKQAHVE 898
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+NQ+
Sbjct: 899 LAERMRKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDNQL 958
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+ PL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK +S
Sbjct: 959 ANPLGRIFEPILGEKKANQLLTGEHTRSISVAAPTLGGLMKFAKKTQTCMGCKKPLSGKE 1018
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +C+ C+ R ELY KT+++V +LE+ FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1019 EMAGAVCALCRPRIGELYTKTLTKVSDLEIRFGRLWTQCQRCQGSLHCEVICSSRDCPIF 1078
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A+ +L R++F
Sbjct: 1079 YMRMKAKKDVEDAQKELSRFDF 1100
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 212/363 (58%), Gaps = 35/363 (9%)
Query: 53 DEESL--ILRDIEQRQDFAS-RLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
+EE L + +DI +D S + +W RPPL + +I FQQ+D E
Sbjct: 66 EEEVLEKLTQDINGLKDSNSEKDQQWERPPLGD-FDETKDNICFQQIDA---------EE 115
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
++ G A+ R+FGVT G SV V GF+ Y YI+ P +D + LE
Sbjct: 116 GTITGGKTAV-RLFGVTEAGQSVLLHVTGFQHYLYIAAPVNFTKEDCDPYRAFLE----- 169
Query: 170 ANRNSKVPQF---VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD---RG 223
SK+ QF ++ +++ + +I +Q + +LKI V P ++ R L+ +G
Sbjct: 170 ----SKLGQFQPVIQSVQITMRENIYGFQGNQKSYYLKITVTEPKFISKVRSALENNAQG 225
Query: 224 IQLDGLGMKS---FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA--KTLSYCQL 278
+ GL + +T++ N+ + LRFMID +I G +W+E GKY + + LS CQ+
Sbjct: 226 LNYKGLWNNADGGILTFD-NIQYLLRFMIDTDIAGMSWVEAKAGKYHLLSPREKLSNCQI 284
Query: 279 EFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGE 338
E Y D+IS P GE++KMAP RILSFDIECAGRKG FPEP HDPVIQ+AN+VT GE
Sbjct: 285 EAVIDYRDLISHPPNGEWAKMAPLRILSFDIECAGRKGIFPEPNHDPVIQIANVVTRYGE 344
Query: 339 KQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
+PFIRNV L +C+ IV ++ F+ E +L+AWRDF+ +VDPDV+IGYNI FD PYL
Sbjct: 345 SKPFIRNVFVLDTCSLIVNTQILEFDKEEKMLMAWRDFLEKVDPDVIIGYNIANFDFPYL 404
Query: 399 IEK 401
+++
Sbjct: 405 LDR 407
>gi|302850307|ref|XP_002956681.1| hypothetical protein VOLCADRAFT_67281 [Volvox carteri f. nagariensis]
gi|300258042|gb|EFJ42283.1| hypothetical protein VOLCADRAFT_67281 [Volvox carteri f. nagariensis]
Length = 991
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/625 (68%), Positives = 512/625 (81%), Gaps = 14/625 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS I+DLQ GN ETRRRLAVYCLKDAYLPQRLLDKLM+ +NY+EMARVTGVP+S
Sbjct: 363 QKEDVHHSAIADLQAGNEETRRRLAVYCLKDAYLPQRLLDKLMYTYNYIEMARVTGVPLS 422
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT----YEGATVLEARAGFYEKPI 515
+LL+RGQSIKV SQLLRKA+ K+ VIPN+K G G YEGATVLE + GFYE+P+
Sbjct: 423 YLLTRGQSIKVFSQLLRKAQVKDFVIPNIKVTGPANGGDGVGYEGATVLEPKIGFYERPV 482
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPE 575
ATLDFASLYPSIMMA+NLCY+TLV P D R +P E ++P G+ FV+ Q+G+LPE
Sbjct: 483 ATLDFASLYPSIMMAHNLCYTTLV-PND-RLATVPVEDRAQSPCGDWFVRGTRQRGLLPE 540
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
ILEELLAARKRAK DLK DP ++AVLDGRQLALK+SANSVYGFTGATVG++PC+ IS+
Sbjct: 541 ILEELLAARKRAKNDLKAETDPFKRAVLDGRQLALKVSANSVYGFTGATVGKMPCLAISA 600
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SVTSYGR+MI T+ LV++ +T GYE + EVIYGDTDSVMV F V V AM+LGREA
Sbjct: 601 SVTSYGREMIMKTRALVQEHYTRANGYETDCEVIYGDTDSVMVNFKVSDVTRAMELGREA 660
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A ++S F P+KLEFEKVY+PYLL++KKRYAGL WT PEK DKMD+KGIETVRRDNCLL
Sbjct: 661 AGFVSKAFPPPVKLEFEKVYFPYLLMNKKRYAGLLWTRPEKHDKMDSKGIETVRRDNCLL 720
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V+N+VT CL +IL+D+DI A YVK I+DLLMN++DLSLLVI+KGLTK GD+Y+ K A
Sbjct: 721 VRNVVTTCLERILIDKDIAAAKAYVKGVIADLLMNKIDLSLLVISKGLTKDGDEYDTKIA 780
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVII--KAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
HVELA++MRKRDAATAP VGDRVPYVII AAKGAKA+E++EDPIY LE+++PID +Y
Sbjct: 781 HVELAKKMRKRDAATAPAVGDRVPYVIIKAGAAKGAKAWEKAEDPIYALEHSLPIDCQHY 840
Query: 874 LENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GIMKFAKRQLSCIGCKA 931
LE+ +S+PLLRIFEP++ N KELL GDHTR I++STPS++ GIM+FAK LSC+ CKA
Sbjct: 841 LEHHLSQPLLRIFEPVMGN-PKELLCGDHTRCIAVSTPSSASGGIMRFAKVTLSCLACKA 899
Query: 932 LISNG---TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRD 988
+ +G +LCSHCK +E+E+Y +T+ V ELE +G LWT CQ CQGSLH DVLCTSRD
Sbjct: 900 PLPSGSKDSLCSHCKPQESEIYSRTLETVSELEGQYGALWTACQRCQGSLHMDVLCTSRD 959
Query: 989 CPIFYRRKKAQKDMAEAKLQLDRWN 1013
CPIFYRRKK QKD+ EA QL+R+
Sbjct: 960 CPIFYRRKKVQKDLNEAMAQLERFG 984
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 193/289 (66%), Gaps = 5/289 (1%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+IR++GV G+SVC VHGFEPYFYI D + L R+R ++ P
Sbjct: 1 VIRMYGVNAAGNSVCAFVHGFEPYFYIEASPSWDRDVRQAIGEQLNVRLRLFSKTKGGPA 60
Query: 179 FVRHIEMVQKRSIMYYQQQKSQ-PFLKIVVALPTMVASCRGILDRGIQLDGLG-MKSFMT 236
+R IE+ QK SI YQ ++ FLKIVV++P +VA RG+ + G+ + +G T
Sbjct: 61 VIR-IELCQKASIWNYQGPDAKRSFLKIVVSVPNLVAPARGLFEGGLHIKSVGEYIKCTT 119
Query: 237 YESNVLFALRFMIDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGE 295
+ESNVL+ LRFM+D +VGGNWIE+P G Y + + L++CQ+E Y+ +S PEGE
Sbjct: 120 FESNVLYTLRFMVDTKVVGGNWIELPAGTYFLQRNQQLTHCQIEAHVHYTKFVSHPPEGE 179
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQ-PFIRNVMTLKSCAP 354
+S +AP RI+S DIEC GRKG FPE DPVIQ+A++V++ G + P ++NVMTL SCAP
Sbjct: 180 YSSVAPLRIMSIDIECCGRKGCFPEAKIDPVIQIASMVSVSGRTEGPVVKNVMTLGSCAP 239
Query: 355 IVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
IVG +VMSF+ E+D+LL WRD + E DPD++IGYNI FDLPYL E+ D
Sbjct: 240 IVGAEVMSFDDEKDMLLRWRDLLIESDPDIIIGYNILNFDLPYLYERAD 288
>gi|405119357|gb|AFR94130.1| delta DNA polymerase [Cryptococcus neoformans var. grubii H99]
Length = 1059
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/617 (65%), Positives = 487/617 (78%), Gaps = 7/617 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++LQNG A++RRRLAVYCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 440 QKEDVHHSIITELQNGTADSRRRLAVYCLKDAYLPQRLMDKLMCFVNYTEMARVTGVPFN 499
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL R A VIP +K GS++ YEGATV+E GFY+ PI TLD
Sbjct: 500 YLLSRGQQIKVVSQLYRNAADAGYVIPALKSEGSDE-QYEGATVIEPSKGFYDVPITTLD 558
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+NLCY+TL+ +L L E TP+ + F S +KG+LP ILE
Sbjct: 559 FASLYPSIMMAHNLCYTTLLDRGTIERLKLVEGEDYVHTPNNDFFATSKRRKGLLPHILE 618
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LLAARKRAK DLK KDP ++AVLDGRQLALK+SANSVYGFTGAT+G+LPC+ ISSSVT
Sbjct: 619 NLLAARKRAKQDLKIEKDPFKRAVLDGRQLALKVSANSVYGFTGATIGKLPCLAISSSVT 678
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TKK VE +++ GY+H+A+V+YGDTDSVMV+FG P + AM+LG EAAD
Sbjct: 679 AYGRQMIELTKKEVEAEYSMKNGYDHDAKVVYGDTDSVMVRFGCPDLPTAMRLGAEAADL 738
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+SG FIKPIKLEFEKVY+PYLLISKKRYAGLYWT PEK+DKMDTKGIETVRRDNC LV
Sbjct: 739 VSGKFIKPIKLEFEKVYFPYLLISKKRYAGLYWTRPEKYDKMDTKGIETVRRDNCRLVST 798
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DRD+ GA YVK TI+DLL N++D+S LVITK L K DY K AHVE
Sbjct: 799 VIETCLFKMLIDRDVKGAEDYVKDTIADLLQNKIDMSQLVITKALAKA--DYAAKQAHVE 856
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L ERMRKRDA +AP++GDRV YVI+K KGA AYE+SEDP+YVLE+N+PIDT YYLENQ+
Sbjct: 857 LVERMRKRDAGSAPSLGDRVAYVIVKGVKGAAAYEKSEDPLYVLEHNVPIDTRYYLENQL 916
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
SKPL+RIFEPIL + LL GDHTR+I I+TP+ G+MKFA + ++C+GCK + +
Sbjct: 917 SKPLMRIFEPILGEKANSLLHGDHTRTIQIATPTIGGLMKFAVKTVTCMGCKTPLRGKNE 976
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C +C+ + ELY K V+Q L++ F RLWTQCQ CQGSLHQDV+CTS DCPIFYRR
Sbjct: 977 SAVCVNCRPKLPELYQKQVAQTSALQIDFARLWTQCQRCQGSLHQDVICTSADCPIFYRR 1036
Query: 996 KKAQKDMAEAKLQLDRW 1012
QK++A + QLDR+
Sbjct: 1037 TARQKEVASSVAQLDRF 1053
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 147/379 (38%), Positives = 214/379 (56%), Gaps = 29/379 (7%)
Query: 32 PVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFAS----RLAKWARPPLSSGYVSQ 87
P+I LD + + P E +L +E +D A A W RPP+ + +
Sbjct: 6 PIIKKRKLDTPLHKELEAQPSFTE--VLEQLEAEEDAAGDSIETSAAWPRPPVPP-FDDK 62
Query: 88 CQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISC 147
++I FQQ++I+ + +R+FGV + G+SV V+GF+PYFY++
Sbjct: 63 KETISFQQIEIEESTDPKH----------GPTLRLFGVNKSGNSVLAHVYGFKPYFYVAA 112
Query: 148 PQGMGPDDISHFHQILEGRMREANRNSKVPQ-FVRHIEMVQKRSIMYYQQQKSQPFLKIV 206
P G D+ Q L ++ N + P V + + +RS+ Y+ + PF+KI
Sbjct: 113 PSGFLNKDL----QPLADKI---NSSISAPGPCVTNCAIFNRRSLWGYRGDDTVPFIKIT 165
Query: 207 VALPTMVASCRG--ILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVG 264
++ P ++ + I +GL +TYESN+ + +RFMID IVG NW+ +P G
Sbjct: 166 ISDPKNLSKVKDEFFTLSPIDFNGLFPPEVLTYESNIAYTMRFMIDTKIVGMNWVSIPGG 225
Query: 265 KYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPT 322
+Y + S CQ+E C Y D+IS PE E+ +AP R+LSFDIECAGRKG FPE
Sbjct: 226 RYDLLEGGNKKSQCQIEILCNYKDLISHAPENEWLDIAPLRVLSFDIECAGRKGIFPEAN 285
Query: 323 HDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDP 382
DPVIQ+A +VT GE +PF+RNV TL +CA IVG V+ F+ ER +LL WR F+ VDP
Sbjct: 286 VDPVIQIAAMVTRHGESKPFVRNVFTLNTCAHIVGSQVLEFKDERRLLLEWRKFVETVDP 345
Query: 383 DVMIGYNICKFDLPYLIEK 401
D++IGYNI FDLPYL+++
Sbjct: 346 DMIIGYNISNFDLPYLLDR 364
>gi|409040940|gb|EKM50426.1| hypothetical protein PHACADRAFT_104509 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1068
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/624 (63%), Positives = 500/624 (80%), Gaps = 13/624 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQNG E+RRRLAVYCLKDAYLPQRL+DKLM NY+EMARVTGVP +
Sbjct: 444 QKEDVHHSVITELQNGGPESRRRLAVYCLKDAYLPQRLMDKLMCFINYIEMARVTGVPFN 503
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQSIKVLSQL RKA ++ V+P ++ G+++ YEGATV+E G+Y+ PIATLD
Sbjct: 504 YLLSRGQSIKVLSQLFRKANEEEYVVPALRGEGTDE-QYEGATVIEPHKGYYKAPIATLD 562
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+NLCY+TL+ +L L + +TP+ + F + +KG+LP ILE
Sbjct: 563 FASLYPSIMMAHNLCYTTLLDKGTIDRLGLEKDVDYIQTPNNDFFATAKRRKGLLPIILE 622
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L++ RKRAKADLK+ DP ++AVLDGRQLALKISANSVYGFTGAT+G+LPC+ ISSS T
Sbjct: 623 DLISTRKRAKADLKKETDPFKRAVLDGRQLALKISANSVYGFTGATIGKLPCLPISSSTT 682
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLG-REAAD 697
++GRQMIE TK+ VE ++ G+ H+AEVIYGDTDSVMV+FG +E M+LG +AA+
Sbjct: 683 AFGRQMIEKTKQEVEAEYCIANGHAHDAEVIYGDTDSVMVKFGPTDLETVMQLGASQAAE 742
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIE--TVRRDNCLL 755
+++ FIKPIKLEFEKVY+PYLLISKKRYAGLYWT P+K+DKMDTKGIE TVRRDNC L
Sbjct: 743 FVTQKFIKPIKLEFEKVYFPYLLISKKRYAGLYWTRPDKYDKMDTKGIEARTVRRDNCRL 802
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V +++ CL+K+L+DRD+ GA++Y K ISDLL N++D+S LVITK L K DY K A
Sbjct: 803 VSTVISTCLNKMLIDRDVDGAIEYTKQIISDLLQNKVDMSQLVITKALAKA--DYAGKQA 860
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
HVELAERM++RDA +APNVGDRV YVIIK AKGA AYE+SEDPI+VLENN+PIDT YYLE
Sbjct: 861 HVELAERMKQRDAGSAPNVGDRVAYVIIKGAKGAAAYEKSEDPIFVLENNMPIDTKYYLE 920
Query: 876 NQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL--- 932
NQ+S PL+RIFEPIL + LLSGDHTR+I I+TP+ G+MKFA + ++C+GCK
Sbjct: 921 NQLSNPLMRIFEPILGEKASSLLSGDHTRTIQIATPTVGGLMKFAVKTVTCMGCKTQLKP 980
Query: 933 ---ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
+SNG +C++C+ R E Y K V+ V +L+V F RLWTQCQ CQGSLHQDVLCTS+DC
Sbjct: 981 SNSVSNGAVCNNCRPRINEFYQKQVTNVSDLQVRFSRLWTQCQRCQGSLHQDVLCTSKDC 1040
Query: 990 PIFYRRKKAQKDMAEAKLQLDRWN 1013
PIFY RKKAQKD+ +A L+R++
Sbjct: 1041 PIFYMRKKAQKDVEDASAVLERFD 1064
Score = 278 bits (712), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 201/340 (59%), Gaps = 35/340 (10%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+WARP L + +I+FQQ+DI+ DS G +R+FGVT+ G+SV
Sbjct: 52 QWARPRLPR-IDPKKDAIVFQQIDIE----DSTE------YGGGPTLRMFGVTQAGNSVL 100
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
V F PYFY++ P+G DDI F L + VR + +V +RS+
Sbjct: 101 AHVTDFHPYFYVAAPRGFLTDDIGAFRSYLNNHASGGS--------VRDVSLVYRRSLWG 152
Query: 194 YQQQKSQPFLKIVVA----LPT-----MVASCRGILDRGIQLDGL-GMKSFMTYESNVLF 243
Y+ + PF++I V+ LP + S RG + L S TYESN+ +
Sbjct: 153 YRGDEKVPFIRIEVSDQRSLPKTRDKWLFNSFRG----ECHFNNLFKTDSVSTYESNIAY 208
Query: 244 ALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAP 301
LRFMID IVG NW+E+P G Y + S+CQLE + I+S +G +S AP
Sbjct: 209 VLRFMIDAKIVGMNWVELPAGGYTIMQEKDKKSHCQLEVSVKWDKIVSHQADGPYSHTAP 268
Query: 302 FRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVM 361
RILSFDIECAGRKG FPEP DPVIQ+A++VT QGE PFIRNV TL +C+ IVG V+
Sbjct: 269 LRILSFDIECAGRKGIFPEPQVDPVIQIASMVTRQGETHPFIRNVFTLSTCSHIVGSQVL 328
Query: 362 SFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
SF++E D+L AWRDF+ E+DPDV+IGYNI FDLPYLI++
Sbjct: 329 SFDSEVDMLNAWRDFVNEIDPDVIIGYNIANFDLPYLIDR 368
>gi|336380987|gb|EGO22139.1| hypothetical protein SERLADRAFT_451027 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1062
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/622 (63%), Positives = 491/622 (78%), Gaps = 9/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQNG E+RRRLAVYCLKDAYLPQRLLDKLM NY+EM+RVTGVP +
Sbjct: 440 QKEDVHHSVITELQNGTPESRRRLAVYCLKDAYLPQRLLDKLMCFVNYIEMSRVTGVPFN 499
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQSIKVLSQL RKA ++ V+P + + YEGATV+E + G+Y+ PIATLD
Sbjct: 500 FLLSRGQSIKVLSQLFRKANEEGYVVPALLKGEGTDEQYEGATVIEPKKGYYDSPIATLD 559
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ +L L + +TP+ + F ++ +KG+LP +LE
Sbjct: 560 FSSLYPSIMMAHNLCYTTLLDKTTIDRLQLVKDVDYIQTPNNDFFATTSRRKGLLPTVLE 619
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L++ARKRAKADLK+ DP + AVLDGRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT
Sbjct: 620 DLISARKRAKADLKKETDPFKCAVLDGRQLALKISANSVYGFTGATIGKLPCLAISSSVT 679
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++ G++HNAEVIYGDTDSVMV+FG + M LG EAAD
Sbjct: 680 SYGRQMIEKTKQEVEAEYCVANGHDHNAEVIYGDTDSVMVKFGPAELTKVMALGSEAADL 739
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ F+KPIKLEFEKVY+PYLLISKKRYAGLYWT PEK+DKMD+KGIETVRRDNC LV
Sbjct: 740 VTARFVKPIKLEFEKVYFPYLLISKKRYAGLYWTKPEKYDKMDSKGIETVRRDNCRLVST 799
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CLHK+L+DRD+ GA Y K ISDLL N++D+S LVITK L+K +Y K AHVE
Sbjct: 800 VIETCLHKMLIDRDVKGAEDYTKRVISDLLQNKVDMSQLVITKALSKA--EYSGKQAHVE 857
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA RM++RDA +AP +GDRV YVI+K KGA AYE+SEDP+YVLENNIPIDT YYL+NQ+
Sbjct: 858 LAGRMKQRDAGSAPALGDRVAYVIVKGMKGAAAYEKSEDPLYVLENNIPIDTKYYLDNQL 917
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKA------L 932
SKPL+RIFEPIL + LLSG HTRSI I+TP+ G+MKFA + ++C+GCK
Sbjct: 918 SKPLMRIFEPILGEKASSLLSGGHTRSIQIATPTVGGLMKFAVKTVTCLGCKTPLRANNS 977
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+ NG +C++C+ + AELY + V E++V F RLWTQCQ CQGSLHQDVLC+S+DCPIF
Sbjct: 978 VKNGAVCNNCRPKTAELYQRHVGTASEMQVRFSRLWTQCQRCQGSLHQDVLCSSKDCPIF 1037
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y RKKAQKD+ +A L+R++
Sbjct: 1038 YMRKKAQKDVEDADAVLERFDL 1059
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 154/333 (46%), Positives = 200/333 (60%), Gaps = 35/333 (10%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDI----DYVIGDSNRELLPLSSGSAAIIRIFGVTREGH 130
WARP L S+ +++FQQ+D+ D+ G A ++R+FGVT GH
Sbjct: 61 WARPALPPVDESR-DALVFQQIDVEPSTDFGTG-------------AVMLRMFGVTEAGH 106
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRS 190
SV V F PYFYI+ P+G DD F R S FV +IE VQ+R+
Sbjct: 107 SVLAYVTDFLPYFYIAVPRGFQNDDKEDF--------RNHINTSLGGSFVVNIESVQRRN 158
Query: 191 IMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMID 250
+ Y+ FLK+ + P + R L +G ++ T+ESN+ +ALRFMID
Sbjct: 159 LWGYRGDDWVAFLKLTICDPKTLPKVRD------NLFPIG-QAVSTFESNIPYALRFMID 211
Query: 251 CNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
+VG NWIE+P GKY+ + S CQ+E Y IS PEG++SK+AP RILSFD
Sbjct: 212 TKVVGMNWIEIPAGKYKIMPDKEKHSQCQVELRVRYDHFISHAPEGKWSKVAPLRILSFD 271
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+AN+VT QG+ QPFIRN+ TL SC+ IVG V+SF+ E
Sbjct: 272 IECAGRKGIFPEPQMDPVIQIANMVTRQGDSQPFIRNIFTLNSCSHIVGSQVLSFKDEGA 331
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AWRDFI E DPDV+IGYNI FD PYL+++
Sbjct: 332 MLQAWRDFIEEADPDVVIGYNISNFDFPYLLDR 364
>gi|393222031|gb|EJD07515.1| hypothetical protein FOMMEDRAFT_164466 [Fomitiporia mediterranea
MF3/22]
Length = 1062
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/621 (63%), Positives = 489/621 (78%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQNG AE+RRRLAVYCLKDAYLPQRL+DKLM NY+EMARVTGVP
Sbjct: 441 QKEDVHHSVITELQNGTAESRRRLAVYCLKDAYLPQRLMDKLMCFVNYIEMARVTGVPFH 500
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL RGQSIKVLSQLLR+A + + P +K G+++ YEGATV+E + G+Y+ PIATLD
Sbjct: 501 FLLQRGQSIKVLSQLLRRANDEGYITPTLKGGGTDE-QYEGATVIEPKKGYYDAPIATLD 559
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ +LNL +TP+ + FV +KG+LP +LE
Sbjct: 560 FSSLYPSIMMAHNLCYTTLLDKHTIDRLNLVKGVDYIQTPNNDFFVTKEKRKGLLPSVLE 619
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L+AARKRAKADLK+ DP +AVLDGRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT
Sbjct: 620 DLIAARKRAKADLKKETDPFRRAVLDGRQLALKISANSVYGFTGATIGKLPCLPISSSVT 679
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK+ VE ++ G EHNAEVIYGDTDSVMV+FG + M++G EAAD
Sbjct: 680 AYGRQMIEKTKQEVEAEYCIANGREHNAEVIYGDTDSVMVKFGPSDLATVMQMGSEAADL 739
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT +K+DKMD+KGIETVRRDNC LV
Sbjct: 740 VTAKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTKTDKYDKMDSKGIETVRRDNCRLVST 799
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CLHK+L+DRD+ GA YVK ISDLL N++D+S LVITK L KT DY K AHV
Sbjct: 800 VIETCLHKMLIDRDVKGAEDYVKQVISDLLQNKIDMSQLVITKALAKT--DYTAKQAHVV 857
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++RDA +AP +GDRV YV+IK K A AYE+SEDPIYVLENNIPIDT YYLENQ+
Sbjct: 858 LAERMKERDAGSAPALGDRVAYVVIKGMKNAAAYEKSEDPIYVLENNIPIDTKYYLENQL 917
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS---- 934
SKPL+RIFEP+L + LLSGDHTR+I I+TP+ G+MK+A + ++C+GCK ++
Sbjct: 918 SKPLMRIFEPVLGEKANSLLSGDHTRTIQIATPTVGGLMKYAVKTITCLGCKTALNAKNS 977
Query: 935 --NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
NG +C++C+ R E Y K L+V F RLWTQCQ CQGSLHQDVLCTS+DCPIF
Sbjct: 978 LKNGVVCNNCRPRLGEFYQKQTVTTSALQVSFSRLWTQCQRCQGSLHQDVLCTSKDCPIF 1037
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y RKKAQKD+ ++ L++++
Sbjct: 1038 YMRKKAQKDVEDSVAVLEKFD 1058
Score = 308 bits (790), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 154/330 (46%), Positives = 212/330 (64%), Gaps = 23/330 (6%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W+RPPL + + SI+FQQ+DI P + I++FGVT +GHSV
Sbjct: 56 WSRPPLRN-LDPKKDSIVFQQIDIK-----------PSHEFNGTGIKLFGVTEDGHSVLA 103
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
++HGF PYF++ P+G DD+S F L ++ N + V ++++ +++S+ Y
Sbjct: 104 RIHGFMPYFFVPAPRGFSEDDLSPFCDYLN---KQDNART-----VDNVKLAKRKSLWGY 155
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNI 253
+ PF++I P V RG+ D G +GL TYESN+ + LRFMID +
Sbjct: 156 RGDDWVPFIRITATHPGFVPRIRGLFDNGECSYNGLFNGIVTTYESNIPYILRFMIDTKV 215
Query: 254 VGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC 311
VG NWIEVP GKY+ K S CQLEF ++D IS P+GE+SK+AP RILSFDIEC
Sbjct: 216 VGMNWIEVPAGKYQLLSGEKKHSCCQLEFTVAWNDFISHAPDGEWSKIAPLRILSFDIEC 275
Query: 312 AGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLL 371
AGRKG FPE DPVIQ+AN+VT QGE +PFIRNV TL +C+ IVG V+S+++E ++L
Sbjct: 276 AGRKGIFPEAQIDPVIQIANMVTRQGESKPFIRNVFTLNTCSHIVGSQVLSYKSELEMLE 335
Query: 372 AWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
AWRDF+ +VDPD++IGYNI FDLPYL+++
Sbjct: 336 AWRDFVEQVDPDIVIGYNIANFDLPYLLDR 365
>gi|89886293|ref|NP_001034899.1| DNA polymerase delta catalytic subunit [Danio rerio]
gi|58615463|gb|AAW80296.1| DNA polymerase delta1 catalytic subunit [Danio rerio]
Length = 1105
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/619 (65%), Positives = 494/619 (79%), Gaps = 6/619 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL KLM + NY+EMARVTGVP++
Sbjct: 489 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLT 548
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQLLR+A +++LV+P VK G E Y GATV+E G+Y PIATLD
Sbjct: 549 YLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGED--YTGATVIEPEKGYYSVPIATLD 606
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ KL L P+ KTP+G+ FVKS+++KG+LPEILE
Sbjct: 607 FSSLYPSIMMAHNLCYTTLLQKSQIEKLGLGPDDFIKTPTGDLFVKSSVRKGLLPEILEN 666
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+LK+ DP +K VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 667 LLSARKRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTG 726
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE ++T GY+ +A+VIYGDTDSVMV+ GV TV+ AM G+EAA+++
Sbjct: 727 FGRQMIEQTKQLVESRYTLDNGYQADAKVIYGDTDSVMVKLGVATVQEAMNQGKEAAEWV 786
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKN 758
S F+ PIKLEFEKVYYPYLLI+KKRYAGLY+ ++ E DKMD KGIETVRRDNC LV N
Sbjct: 787 SSHFVPPIKLEFEKVYYPYLLINKKRYAGLYFSSSAEHHDKMDCKGIETVRRDNCPLVAN 846
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL IL+DRD GAV + K ISDLL NR+D+S LVITK LT+T +Y K AHVE
Sbjct: 847 LINTCLQNILIDRDPDGAVTHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGKQAHVE 906
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +APN+GDRVPYVIIKAAKG AY +SEDPIYVLENNIPIDT YYLE Q+
Sbjct: 907 LAERMRKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTQYYLEQQL 966
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-SN 935
SKPLLRIFEPIL + E LL GDHTR ++ T G+M FA+++ +CIGC+A++ ++
Sbjct: 967 SKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSRVGGLMAFAQKRSTCIGCRAVLKTD 1026
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C CK RE+ELY K ++ + LE F RLWTQCQ CQGSLH+DVLCTSRDCPIFY R
Sbjct: 1027 VAVCDFCKKRESELYQKEIAHLSTLEEKFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMR 1086
Query: 996 KKAQKDMAEAKLQLDRWNF 1014
KK QKD+ + + + R+ +
Sbjct: 1087 KKVQKDLDDQEKLVSRFGW 1105
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/416 (38%), Positives = 242/416 (58%), Gaps = 24/416 (5%)
Query: 3 RSNGSARKRPPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLP-EDEESLILRD 61
R NG K+ P+ + +P+ +F +E DE + E E D
Sbjct: 5 RRNGGPAMGGASQAKKGKPSTEWEDSPS------QFEEELALFDEMDMEVESGEGQAGHD 58
Query: 62 IEQRQD-FASRL-AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAI 119
+ D F++ L +W RP S + + +++FQQ+D+DY +G + + G I
Sbjct: 59 VIPVGDLFSTDLNPRWKRPHASPLH-PKSDTLIFQQIDLDYYLGAAVAGMPGQVQGKVPI 117
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VP 177
+R+FGVT G+SVCC +HGF PYFY+ P G ++ F + L + + R++K +
Sbjct: 118 VRMFGVTDNGNSVCCHIHGFAPYFYVPAPNGFTNAHLAGFQRELNSVVLKDMRSNKDNIA 177
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
V +++ +K S+ Y K FL+I +A+P +VA + +L++G + +S+ +
Sbjct: 178 VTVLAVDITKKESMYNYHGNKPHDFLRITMAMPRLVAPAKRLLEQGFKFANFATQSYQAF 237
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKY-----RKTAKT-------LSYCQLEFDCLYS 285
E+N+ F +RFM+D N+VG WIE+P GKY R+ +T +S CQ E D +
Sbjct: 238 EANIDFEIRFMVDSNVVGCCWIELPKGKYQLREERREGQTDSKYPGKVSLCQYEVDVAWD 297
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRN 345
+IS EGE+ ++AP R+LSFDIECAGRKG FPEP DPVIQ+A++V QGEK+PFIR
Sbjct: 298 SLISHPAEGEWQRIAPLRVLSFDIECAGRKGVFPEPEVDPVIQIASMVQRQGEKEPFIRT 357
Query: 346 VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V TL+SCA IVG ++ F E+ +L +W +F+R VDPD++ GYNI FDLPYL+ +
Sbjct: 358 VFTLQSCASIVGSQILCFTQEKLMLQSWAEFMRTVDPDIITGYNIQNFDLPYLLNR 413
>gi|190340064|gb|AAI63875.1| Polymerase (DNA directed), delta 1, catalytic subunit [Danio rerio]
Length = 1105
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/619 (65%), Positives = 494/619 (79%), Gaps = 6/619 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL KLM + NY+EMARVTGVP++
Sbjct: 489 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLT 548
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQLLR+A +++LV+P VK G E Y GATV+E G+Y PIATLD
Sbjct: 549 YLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGED--YTGATVIEPEKGYYSVPIATLD 606
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ KL L P+ KTP+G+ FVKS+++KG+LPEILE
Sbjct: 607 FSSLYPSIMMAHNLCYTTLLQKSQIEKLGLGPDDFIKTPTGDLFVKSSVRKGLLPEILEN 666
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+LK+ DP +K VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 667 LLSARKRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTG 726
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE ++T GY+ +A+VIYGDTDSVMV+ GV TV+ AM G+EAA+++
Sbjct: 727 FGRQMIEQTKQLVESRYTLDNGYQADAKVIYGDTDSVMVKLGVATVQEAMNQGKEAAEWV 786
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKN 758
S F+ PIKLEFEKVYYPYLLI+KKRYAGLY+ ++ E DKMD KGIETVRRDNC LV N
Sbjct: 787 SSHFVPPIKLEFEKVYYPYLLINKKRYAGLYFSSSAEHHDKMDCKGIETVRRDNCPLVAN 846
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL IL+DRD GAV + K ISDLL NR+D+S LVITK LT+T +Y K AHVE
Sbjct: 847 LINTCLQNILIDRDPDGAVTHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGKQAHVE 906
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +APN+GDRVPYVIIKAAKG AY +SEDPIYVLENNIPIDT YYLE Q+
Sbjct: 907 LAERMRKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTQYYLEQQL 966
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-SN 935
SKPLLRIFEPIL + E LL GDHTR ++ T G+M FA+++ +CIGC+A++ ++
Sbjct: 967 SKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSRVGGLMAFAQKRSTCIGCRAVLKTD 1026
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C CK RE+ELY K ++ + LE F RLWTQCQ CQGSLH+DVLCTSRDCPIFY R
Sbjct: 1027 VAVCDFCKKRESELYQKEIAHLSTLEEKFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMR 1086
Query: 996 KKAQKDMAEAKLQLDRWNF 1014
KK QKD+ + + + R+ +
Sbjct: 1087 KKVQKDLDDQEKLVSRFGW 1105
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/416 (38%), Positives = 242/416 (58%), Gaps = 24/416 (5%)
Query: 3 RSNGSARKRPPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLP-EDEESLILRD 61
R NG K+ P+ + +P+ +F +E DE + E E D
Sbjct: 5 RRNGGPAMGGASQAKKGKPSTEWEDSPS------QFEEELALFDEMDMEVESGEGQAGHD 58
Query: 62 IEQRQD-FASRL-AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAI 119
+ D F++ L +W RP S + + +++FQQ+D+DY +G + + G I
Sbjct: 59 VIPVGDLFSTDLNPRWKRPHASPLH-PKSDTLIFQQIDLDYYLGAAVAGMPGQVQGKVPI 117
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VP 177
+R+FGVT G+SVCC +HGF PYFY+ P G ++ F + L + + R++K +
Sbjct: 118 VRMFGVTDNGNSVCCHIHGFAPYFYVPAPNGFTNAHLADFQRELNSVVLKDMRSNKDNIA 177
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
V +++ +K S+ Y K FL+I +A+P +VA + +L++G + +S+ +
Sbjct: 178 VTVLAVDITKKESMYNYHGNKPHDFLRITMAMPRLVAPAKRLLEQGFKFANFATQSYQAF 237
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKY-----RKTAKT-------LSYCQLEFDCLYS 285
E+N+ F +RFM+D N+VG WIE+P GKY R+ +T +S CQ E D +
Sbjct: 238 EANIDFEIRFMVDSNVVGCCWIELPKGKYQLREERREGQTDSKYPGKVSLCQYEVDVAWD 297
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRN 345
+IS EGE+ ++AP R+LSFDIECAGRKG FPEP DPVIQ+A++V QGEK+PFIR
Sbjct: 298 SLISHPAEGEWQRIAPLRVLSFDIECAGRKGVFPEPEVDPVIQIASMVQRQGEKEPFIRT 357
Query: 346 VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V TL+SCA IVG ++ F E+ +L +W +F+R VDPD++ GYNI FDLPYL+ +
Sbjct: 358 VFTLQSCASIVGSQILCFTQEKLMLQSWAEFMRTVDPDIITGYNIQNFDLPYLLNR 413
>gi|291190618|ref|NP_001167152.1| DNA polymerase delta catalytic subunit [Salmo salar]
gi|223648376|gb|ACN10946.1| DNA polymerase delta catalytic subunit [Salmo salar]
Length = 1105
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/619 (65%), Positives = 490/619 (79%), Gaps = 6/619 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL KLM + NY+EMARVTGVP++
Sbjct: 489 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLT 548
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQLLR+A ++ LV+P VK G E Y GATV+E G+Y PIATLD
Sbjct: 549 YLLSRGQQIKVVSQLLRQAMKQGLVMPVVKPEGGED--YTGATVIEPEKGYYSVPIATLD 606
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ A KL L PE KTP+G+ FVKS+++KG+LP+ILE+
Sbjct: 607 FSSLYPSIMMAHNLCYTTLLQKGSAEKLGLNPEDFIKTPTGDLFVKSSVRKGLLPDILED 666
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AKA+LK DP +K VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 667 LLSARKKAKAELKNETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTG 726
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ +A+VIYGDTDSVMV+ GV TV AM++GREAA+++
Sbjct: 727 FGRQMIEQTKQLVESKYTIANGYQADAKVIYGDTDSVMVKLGVDTVSRAMEVGREAAEWV 786
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKN 758
S F PIKLEFEKVYYPYLLI+KKRYAGLY+ ++ + DKMD KGIETVRRDNC LV N
Sbjct: 787 SSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSSADTHDKMDCKGIETVRRDNCTLVAN 846
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL IL+DRD GAV + K ISDLL NR+D+S LVITK LT+T +Y K AHVE
Sbjct: 847 LINTCLQTILIDRDPQGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAAKQAHVE 906
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRDA +AP +GDRVPYVIIKAAKG AY +SEDPIYVLENNIPIDT YYLE Q+
Sbjct: 907 LAERMKKRDAGSAPQLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTQYYLEQQL 966
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
SKPLLRIFEPIL + E LL GDHTR ++ T G+M FA R+ +CIGC+A++ N
Sbjct: 967 SKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSRVGGLMAFATRRSACIGCRAVLKND 1026
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C CK +E+ELY K + + LE F RLWTQCQ CQGSLH+DVLCTSRDCPIFY R
Sbjct: 1027 AAVCDFCKKKESELYQKEIFHLSTLEERFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMR 1086
Query: 996 KKAQKDMAEAKLQLDRWNF 1014
KK QKD+ + + + R+ +
Sbjct: 1087 KKVQKDLDDQEKLVSRFGW 1105
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 218/345 (63%), Gaps = 21/345 (6%)
Query: 74 KWARP---PLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGH 130
+W RP PL+ +++FQQ+D+DY +G + + S G+ IIR+FGVT G+
Sbjct: 73 RWRRPQAAPLNP----DSDTLVFQQIDLDYYLGAAVAGMPGQSQGNVPIIRMFGVTDSGN 128
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC VHGF PYFYI P G D +S F + L + + R++K + V +++ +K
Sbjct: 129 SVCCHVHGFAPYFYIPAPNGFTSDHLSEFKRELNSAVLKDMRSNKDNMSVTVLAVDITRK 188
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
++ Y ++ FL+I +A+P ++A + +L++G + ++SF +YE+N+ F +RFM
Sbjct: 189 ETMYGYHGKRIVDFLRITMAMPRLIAPAKRLLEQGFKFGPFPIQSFSSYEANIDFEIRFM 248
Query: 249 IDCNIVGGNWIEVPVGKYRKTAK------------TLSYCQLEFDCLYSDIISRHPEGEF 296
+D ++VG WIE+P GKYR A+ +S CQ E D ++ +IS EGE+
Sbjct: 249 VDSDVVGCCWIELPKGKYRVRAERKVGETDAHYPGKVSLCQYEVDVGWTQLISHPAEGEY 308
Query: 297 SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
++AP R+LSFDIECAGRKG FPE DPVIQ+A++V QGEK+PFIR V TL+SC+ IV
Sbjct: 309 QRIAPLRVLSFDIECAGRKGIFPEAEKDPVIQIASMVQRQGEKEPFIRTVFTLQSCSSIV 368
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
G V+ F E +L +W +F+R VD D++ GYNI FDLPYL+ +
Sbjct: 369 GSQVLCFTKESQLLQSWAEFVRTVDADIITGYNIQNFDLPYLLNR 413
>gi|213406475|ref|XP_002174009.1| DNA polymerase delta catalytic subunit [Schizosaccharomyces japonicus
yFS275]
gi|212002056|gb|EEB07716.1| DNA polymerase delta catalytic subunit [Schizosaccharomyces japonicus
yFS275]
Length = 1067
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/617 (65%), Positives = 486/617 (78%), Gaps = 6/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SII+DLQNG ++RRRLA+YCLKDA+LPQRL+DKLM NY EMARVTGVP +
Sbjct: 450 QKEDVHYSIITDLQNGTPDSRRRLAIYCLKDAFLPQRLMDKLMCFVNYTEMARVTGVPFN 509
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +KV+SQL RKA +LVIPN++ G+++ YEGATV+E G+Y+ PIATLD
Sbjct: 510 FLLSRGQQVKVVSQLYRKALSHDLVIPNIRVNGTDE-QYEGATVIEPVKGYYDTPIATLD 568
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL PE +LN+ E TP+G+ FV+SN++KG+LP I E
Sbjct: 569 FSSLYPSIMMAHNLCYTTLTDPETMSRLNMKQDEDYIITPNGDYFVRSNIRKGLLPLIFE 628
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+LL ARKRAKADLK+ DP +KAVLDGRQLALK+SANSVYGFTGAT G+LPC+ ISSSVT
Sbjct: 629 DLLGARKRAKADLKKETDPFKKAVLDGRQLALKVSANSVYGFTGATNGRLPCLAISSSVT 688
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK +VE +T GY H+A+VIYGDTDSVMV+FG + MKLG+EAAD+
Sbjct: 689 SYGRQMIEKTKSVVEQTYTIKNGYSHDAKVIYGDTDSVMVKFGKKDLTEVMKLGQEAADF 748
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+ PIKLEFEKVY+PYLLISKKRYAGL+WT PEK+DK+D+KGIETVRRDNC LV
Sbjct: 749 VSDQFLNPIKLEFEKVYFPYLLISKKRYAGLFWTRPEKYDKLDSKGIETVRRDNCPLVSY 808
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L K+L+D+D+ GA + K ISDLL N++D+S LVITK LTKT DY K AHVE
Sbjct: 809 VIDTALRKMLIDQDVEGAQSFTKKIISDLLQNKIDMSQLVITKALTKT--DYAAKQAHVE 866
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVIIK A+G + Y RSEDP+YVLENNIPID YYLENQ+
Sbjct: 867 LAERMRKRDAGSAPALGDRVAYVIIKGAQGDQFYMRSEDPMYVLENNIPIDAKYYLENQL 926
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
+KPLLRIFEPIL + LL GDHTR+IS++TPS GIMKFA + +CIGCK I G
Sbjct: 927 AKPLLRIFEPILGEKANSLLHGDHTRTISMATPSLGGIMKFAVKTETCIGCKVPIRKGKA 986
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC C+ R AE Y + V V +LEV F RLWT+CQ CQGSLHQDV+CTSRDCPIFY R
Sbjct: 987 ALCDDCRDRSAEFYQRQVGLVNDLEVRFARLWTECQRCQGSLHQDVICTSRDCPIFYMRM 1046
Query: 997 KAQKDMAEAKLQLDRWN 1013
K + +A L R++
Sbjct: 1047 AEHKKLNQAISLLKRFD 1063
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/332 (43%), Positives = 200/332 (60%), Gaps = 22/332 (6%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W RPPL + I FQQ+D + ++ E +P IR+FGVT G+SV
Sbjct: 66 WPRPPLKT-INPDIDDIYFQQIDCE----ENVDEQVP-------TIRMFGVTEAGNSVLT 113
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V GF PYF++ P G P ++ F + L+ R N V E+ K ++ +
Sbjct: 114 HVTGFLPYFFVKAPPGFQPSMLNDFAKTLD---RACNGG-----VVSRCEIKMKENLYGF 165
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNI 253
Q + PF++I ++ P +V CR + +R + + + S MTYESN+ + +RFMIDCN+
Sbjct: 166 QGNEKSPFIQIYISDPKLVTRCRNVFERNELSFNDMFPTSVMTYESNLQYLMRFMIDCNV 225
Query: 254 VGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECA 312
VG NWI +P KY + +S CQ+E Y D+ S + ++SKMAP RILSFDIECA
Sbjct: 226 VGMNWIRLPAKKYLLRQQNKISDCQIEVWIDYRDLESLSADDKWSKMAPLRILSFDIECA 285
Query: 313 GRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLA 372
GRKG FPE + DPVIQ+A++VT G+ PF+RNV + +C+ IVG V FE +R++L A
Sbjct: 286 GRKGVFPEASIDPVIQIASIVTQYGDNSPFVRNVFCIGTCSQIVGTQVFEFEDQREMLAA 345
Query: 373 WRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
W FIREVDPDVMIGYNIC FD PYLIE+ V
Sbjct: 346 WAKFIREVDPDVMIGYNICNFDFPYLIERAKV 377
>gi|336368221|gb|EGN96564.1| hypothetical protein SERLA73DRAFT_58496 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1084
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/622 (63%), Positives = 491/622 (78%), Gaps = 9/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQNG E+RRRLAVYCLKDAYLPQRLLDKLM NY+EM+RVTGVP +
Sbjct: 462 QKEDVHHSVITELQNGTPESRRRLAVYCLKDAYLPQRLLDKLMCFVNYIEMSRVTGVPFN 521
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQSIKVLSQL RKA ++ V+P + + YEGATV+E + G+Y+ PIATLD
Sbjct: 522 FLLSRGQSIKVLSQLFRKANEEGYVVPALLKGEGTDEQYEGATVIEPKKGYYDSPIATLD 581
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ +L L + +TP+ + F ++ +KG+LP +LE
Sbjct: 582 FSSLYPSIMMAHNLCYTTLLDKTTIDRLQLVKDVDYIQTPNNDFFATTSRRKGLLPTVLE 641
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L++ARKRAKADLK+ DP + AVLDGRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT
Sbjct: 642 DLISARKRAKADLKKETDPFKCAVLDGRQLALKISANSVYGFTGATIGKLPCLAISSSVT 701
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++ G++HNAEVIYGDTDSVMV+FG + M LG EAAD
Sbjct: 702 SYGRQMIEKTKQEVEAEYCVANGHDHNAEVIYGDTDSVMVKFGPAELTKVMALGIEAADL 761
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ F+KPIKLEFEKVY+PYLLISKKRYAGLYWT PEK+DKMD+KGIETVRRDNC LV
Sbjct: 762 VTARFVKPIKLEFEKVYFPYLLISKKRYAGLYWTKPEKYDKMDSKGIETVRRDNCRLVST 821
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CLHK+L+DRD+ GA Y K ISDLL N++D+S LVITK L+K +Y K AHVE
Sbjct: 822 VIETCLHKMLIDRDVKGAEDYTKRVISDLLQNKVDMSQLVITKALSKA--EYSGKQAHVE 879
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA RM++RDA +AP +GDRV YVI+K KGA AYE+SEDP+YVLENNIPIDT YYL+NQ+
Sbjct: 880 LAGRMKQRDAGSAPALGDRVAYVIVKGMKGAAAYEKSEDPLYVLENNIPIDTKYYLDNQL 939
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKA------L 932
SKPL+RIFEPIL + LLSG HTRSI I+TP+ G+MKFA + ++C+GCK
Sbjct: 940 SKPLMRIFEPILGEKASSLLSGGHTRSIQIATPTVGGLMKFAVKTVTCLGCKTPLRANNS 999
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+ NG +C++C+ + AELY + V E++V F RLWTQCQ CQGSLHQDVLC+S+DCPIF
Sbjct: 1000 VKNGAVCNNCRPKTAELYQRHVGTASEMQVRFSRLWTQCQRCQGSLHQDVLCSSKDCPIF 1059
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y RKKAQKD+ +A L+R++
Sbjct: 1060 YMRKKAQKDVEDADAVLERFDL 1081
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/340 (45%), Positives = 200/340 (58%), Gaps = 38/340 (11%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDI----DYVIGDSNRELLPLSSGSAAIIRIFGVTREGH 130
WARP L S+ +++FQQ+D+ D+ G A ++R+FGVT GH
Sbjct: 67 WARPALPPVDESR-DALVFQQIDVEPSTDFGTG-------------AVMLRMFGVTEAGH 112
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRS 190
SV V F PYFYI+ P+G DD F R S FV +IE VQ+R+
Sbjct: 113 SVLAYVTDFLPYFYIAVPRGFQNDDKEDF--------RNHINTSLGGSFVVNIESVQRRN 164
Query: 191 IMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM-------TYESNVLF 243
+ Y+ FLK+ + P + R D+ I +S T+ESN+ +
Sbjct: 165 LWGYRGDDWVAFLKLTICDPKTLPKVR---DKYISQGECHFQSLFPIGQAVSTFESNIPY 221
Query: 244 ALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAP 301
ALRFMID +VG NWIE+P GKY+ + S CQ+E Y IS PEG++SK+AP
Sbjct: 222 ALRFMIDTKVVGMNWIEIPAGKYKIMPDKEKHSQCQVELRVRYDHFISHAPEGKWSKVAP 281
Query: 302 FRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVM 361
RILSFDIECAGRKG FPEP DPVIQ+AN+VT QG+ QPFIRN+ TL SC+ IVG V+
Sbjct: 282 LRILSFDIECAGRKGIFPEPQMDPVIQIANMVTRQGDSQPFIRNIFTLNSCSHIVGSQVL 341
Query: 362 SFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
SF+ E +L AWRDFI E DPDV+IGYNI FD PYL+++
Sbjct: 342 SFKDEGAMLQAWRDFIEEADPDVVIGYNISNFDFPYLLDR 381
>gi|402223554|gb|EJU03618.1| hypothetical protein DACRYDRAFT_93925 [Dacryopinax sp. DJM-731 SS1]
Length = 1097
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/623 (63%), Positives = 493/623 (79%), Gaps = 12/623 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KE+VHHSII++LQNG AE+RRRLAVYCLKD+YLPQRL+DKLM NY EMARVTGVP +
Sbjct: 475 QKEEVHHSIITELQNGTAESRRRLAVYCLKDSYLPQRLMDKLMSFVNYTEMARVTGVPFN 534
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ IKV+SQL RKA ++P VK GS++ YEGATV+E G+Y+ PIATLD
Sbjct: 535 YLLQRGQQIKVISQLYRKANDDGYLVPAVKSEGSDEVQYEGATVIEPEKGYYDVPIATLD 594
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVN--KTPSGETFVKSNLQKGILPEIL 577
F+SLYPSIMMA+NLCY+TL+T E +LNL E V+ KTP+ + FV +KG+LP +L
Sbjct: 595 FSSLYPSIMMAHNLCYTTLLTKETIDRLNLV-EGVDYVKTPNHDYFVTPTRRKGLLPTVL 653
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
E+L+ ARKRAKADLK+ DP ++AVLDGRQLALKISANSVYGFTGAT+G+LPC+ ISSSV
Sbjct: 654 EDLITARKRAKADLKKETDPFKRAVLDGRQLALKISANSVYGFTGATIGKLPCLAISSSV 713
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
T+YGR MIE TK+ VE ++ G E +A+VIYGDTDSVMV+FG P ++ AM LG EAA+
Sbjct: 714 TAYGRDMIEQTKQEVEKEYCIASGKEWDAKVIYGDTDSVMVRFGCPDLKTAMALGAEAAE 773
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
I+ F++PIKLEFEKVY+PYLLISKKRYAGLYWT EK+DKMD+KGIETVRRDNC LV+
Sbjct: 774 IITAKFVRPIKLEFEKVYFPYLLISKKRYAGLYWTKAEKWDKMDSKGIETVRRDNCRLVQ 833
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ CLHK+L++RD+ GA++Y K TISDLL N++D+S LVITK LTK +DY K AH
Sbjct: 834 TVIETCLHKMLIERDVDGAIEYTKQTISDLLQNKIDMSQLVITKALTK--EDYAAKQAHS 891
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
EL +RM++RD +AP +GDRV YVIIK K A AYE+SEDP+YVLENN+PIDT YYL+NQ
Sbjct: 892 ELVKRMKQRDVGSAPALGDRVAYVIIKGTKDAAAYEKSEDPLYVLENNVPIDTRYYLDNQ 951
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS--- 934
+S PL+RIFEPIL +K LL+G+HTRSI I+TP+ G+MKFA R ++C+GCK +
Sbjct: 952 LSNPLMRIFEPILGEKAKSLLAGEHTRSIQIATPTVGGLMKFAVRTVTCLGCKTPMRANN 1011
Query: 935 ----NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
NG +C++C+ R ELY K S L+V F RLWTQCQ CQGSLHQDVLC S+DCP
Sbjct: 1012 SKNPNGAVCNNCRSRLPELYQKQASTTSGLQVHFARLWTQCQRCQGSLHQDVLCASKDCP 1071
Query: 991 IFYRRKKAQKDMAEAKLQLDRWN 1013
IFY RKKAQKD+ EA ++R+N
Sbjct: 1072 IFYMRKKAQKDVTEAVEMMERFN 1094
Score = 315 bits (807), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 157/331 (47%), Positives = 209/331 (63%), Gaps = 22/331 (6%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+WARP L + +I+FQQ+DI+ E GS ++ +FGVT +GHSV
Sbjct: 88 QWARPELKP-LDERRDTIIFQQIDIE--------ETADAIDGSPSL-HLFGVTEQGHSVL 137
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
V GF PYFYI+ P+G D F + + R EA + +E+++K+S+
Sbjct: 138 MHVTGFHPYFYIAVPRGFVEQDCDTFRRYINERNDEA---------IFRLEIIKKKSLWG 188
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCN 252
Y+ PFLKIV++ P ++ RG+ DRG I GL TYESN+ + +RFMIDC
Sbjct: 189 YRGDDQNPFLKIVISKPRLLPKIRGMFDRGEIDYKGLFTGPVPTYESNISYEMRFMIDCR 248
Query: 253 IVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIE 310
+VG NWIEVP GKY R + +S CQ+EF ++ IS PEGE+ K AP R+LSFDIE
Sbjct: 249 VVGMNWIEVPAGKYQLRSAREQVSKCQIEFTVQWNQFISHAPEGEWQKTAPLRVLSFDIE 308
Query: 311 CAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVL 370
CAGRKG FPEP DPVIQ+ N+VT QGE PFIRN+ TL +CA IVG V+ FE E D+L
Sbjct: 309 CAGRKGIFPEPQIDPVIQIGNMVTRQGESSPFIRNIFTLNTCANIVGSQVLEFEKEADLL 368
Query: 371 LAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
W+DF+ EVDPD+++GYNI FDLPYL+++
Sbjct: 369 SKWKDFVEEVDPDMIVGYNIANFDLPYLLDR 399
>gi|115387887|ref|XP_001211449.1| DNA polymerase delta catalytic subunit [Aspergillus terreus NIH2624]
gi|114195533|gb|EAU37233.1| DNA polymerase delta catalytic subunit [Aspergillus terreus NIH2624]
Length = 1104
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/622 (64%), Positives = 499/622 (80%), Gaps = 11/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 482 QKEDVHHTMITELHNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 541
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA ++ LVIPN Q +++ YEGATV+E G+Y PIATLD
Sbjct: 542 FLLSRGQQVKFISQLFRKALEQQLVIPN--QKSNDEQDYEGATVIEPVRGYYGVPIATLD 599
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KLNL E TP+G F + ++KG+L +ILE
Sbjct: 600 FASLYPSIIQAHNLCYTTLLNKNSVEKLNLKKDEDYIVTPNGHMFCTTKVRKGLLSQILE 659
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARK+AK DL DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS T
Sbjct: 660 ELLTARKKAKKDLAIETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTT 719
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++T GY H+A+VIYGDTDSVMV+FGV T+E AMKLG+EA++Y
Sbjct: 720 SYGRQMIEKTKQEVEARYTIANGYSHDAKVIYGDTDSVMVKFGVSTLEEAMKLGQEASEY 779
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT +K+DKMDTKGIETVRRDNCLLV+N
Sbjct: 780 VSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTKTDKYDKMDTKGIETVRRDNCLLVQN 839
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ LHKIL+DRDI GA +YVK TISDLL N++D+S LVITK L+K DDY+ K AHVE
Sbjct: 840 VIETVLHKILIDRDIDGAQEYVKETISDLLQNKIDMSKLVITKALSK--DDYKAKQAHVE 897
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRDA +AP +GDRV YV+IK A G+K YERSEDPIYVLENNIPIDT YYL+NQ+
Sbjct: 898 LAERMKKRDAGSAPTLGDRVAYVMIKGAGGSKNYERSEDPIYVLENNIPIDTKYYLDNQL 957
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+ PL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK +S
Sbjct: 958 ANPLGRIFEPILGEKKASQLLTGEHTRSISVAAPTMGGLMKFAKKTQTCLGCKKPLSGKE 1017
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +C C+ R ELY +++ +V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1018 EMAGAVCVLCRPRMGELYTRSLKKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIF 1077
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +++ +L R++
Sbjct: 1078 YMRMKAKKDVEDSQKELARFDL 1099
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 210/360 (58%), Gaps = 29/360 (8%)
Query: 53 DEESL--ILRDIEQRQDFAS-RLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
+EE L + +DI + +D S + +W RPPL + +++ FQQ+D E
Sbjct: 65 EEEVLEKLTQDISELKDKNSEKDQQWERPPLGE-FDPAKENVCFQQIDA---------EE 114
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
L G+AAI R+FGVT G SV V GF+ Y YI+ P G +D + LE R+
Sbjct: 115 GTLFGGNAAI-RLFGVTEIGQSVLLHVTGFQHYLYIAAPGGFTKEDCDPYRAFLESRLGS 173
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG---IQL 226
R ++ +E+ + +I +Q + +LKI V P VA R L+ G +
Sbjct: 174 YQRT------IQSVEITLRENIYGFQGNQKSWYLKITVTDPRSVARVRSALENGGSNMNY 227
Query: 227 DGLGMK---SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFD 281
GL K +T++ N+ + LRFMID I G +W+E GKYR + S CQ+E
Sbjct: 228 KGLWSKEDAGILTFD-NIQYLLRFMIDTGISGMSWVEAKAGKYRLLNHDERQSNCQIEAA 286
Query: 282 CLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQP 341
Y D+I+ P GE++KMAP RILSFDIECAGRKG FPEP DPVIQ+AN+VT GE +P
Sbjct: 287 VDYRDLIAHPPNGEWAKMAPLRILSFDIECAGRKGIFPEPNQDPVIQIANVVTRYGESKP 346
Query: 342 FIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
FIRNV + +C+ IV V+ F+ E +L+AWRDF+ +VDPDV+IGYNI FD PYL+++
Sbjct: 347 FIRNVFVMDTCSLIVNTQVLEFDKEEKMLMAWRDFLEKVDPDVIIGYNIANFDFPYLLDR 406
>gi|428182790|gb|EKX51650.1| DNA polymerase delta catalytic subunit [Guillardia theta CCMP2712]
Length = 985
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/625 (63%), Positives = 500/625 (80%), Gaps = 12/625 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNG+AE+RRRLAVYCLKDAYLPQRLLDKLMFI+NYVEMARVTGVPI
Sbjct: 361 QKEDVHHSIISDLQNGDAESRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPIG 420
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ +KV+SQLLRKA+ K L++PN+K +++ +EGA V+E + GFY PIATLD
Sbjct: 421 WLLVRGQMLKVMSQLLRKARSKGLLLPNLKVESTDE-KFEGAIVIEPKKGFYSDPIATLD 479
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDAR--KLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
FASLYPSIMMA+NLCYSTLV+ ED R K N PE + TP G+TFVK +++KGILPEIL
Sbjct: 480 FASLYPSIMMAHNLCYSTLVSKEDLRTNKFNFTPEQITVTPHGDTFVKPSVKKGILPEIL 539
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
+ELLAARKRAKADLK+A DP+ KAVLDGRQLALK+SANSVYGFTGA VG+LPC+EISSSV
Sbjct: 540 DELLAARKRAKADLKKATDPIMKAVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISSSV 599
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVP----TVEAAMKLGR 693
T++GR+MIE TK VE +T GY+H++ V+YGDTDSVM++FG ++ MKL
Sbjct: 600 TAFGREMIELTKAKVEAHYTVANGYKHDSVVVYGDTDSVMIKFGENRERWMIDETMKLAL 659
Query: 694 EAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNC 753
AAD+++ +F+KPIKLEFEKVYYPYLL++KKRYA L WTNP+KFDKMD KGIETVRRDNC
Sbjct: 660 SAADFVNTSFVKPIKLEFEKVYYPYLLMNKKRYAALLWTNPDKFDKMDCKGIETVRRDNC 719
Query: 754 LLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVK 813
LV+ +V CL IL+ RD A +YVK I DLLMN++D+S L+ITK L K+ +D +
Sbjct: 720 GLVRTMVDTCLKTILMQRDPNAAAEYVKGVIRDLLMNKVDISELIITKALHKSEEDSKSA 779
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
AHV LA RM++RD TAP +GDRVPYVIIK KGAKA+E++EDPI+VLENN+PID +Y
Sbjct: 780 QAHVVLAARMKERDPNTAPVLGDRVPYVIIKGPKGAKAFEKAEDPIFVLENNLPIDVQHY 839
Query: 874 LENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI 933
L++Q+S+P+LR+FEPIL + + LLSGDHTR IS+STP+ G+MKF K +C+GC+ +
Sbjct: 840 LDHQLSQPILRLFEPIL-DKPQSLLSGDHTRQISLSTPTTGGLMKFVKATKTCLGCRTPL 898
Query: 934 SN--GTLCSHCKGREA--ELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
+ T+C HCK +E ++ +++ + ++ F +LWTQCQ CQGSLH +V+CTSRDC
Sbjct: 899 KDERATVCEHCKPKEVLFKVAVRSIDNLNHMQTQFAKLWTQCQRCQGSLHMEVICTSRDC 958
Query: 990 PIFYRRKKAQKDMAEAKLQLDRWNF 1014
PIFYRR+KA KD+ EA+ +R++
Sbjct: 959 PIFYRRRKAHKDLIEAQKTAERFSL 983
Score = 303 bits (776), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 191/285 (67%), Gaps = 3/285 (1%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE---ANRNSKV 176
+R++GVT EGHS VHG++PYFY+ P+ + + + L RM E +++ +
Sbjct: 1 MRLYGVTAEGHSAVVHVHGYDPYFYVQAPKEINENICQEIAETLNRRMAERVDSSKKTSN 60
Query: 177 PQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMT 236
Q++R++EM K++I Y+Q+ FLKI P V + R IL+ GIQ+ LG ++F+T
Sbjct: 61 GQYIRYVEMEYKQTIWNYRQEDFVKFLKISTVWPQHVTTARSILENGIQISNLGTRTFLT 120
Query: 237 YESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEF 296
YESNV+F +R+M+D IVG NWI +P +Y + + CQ E D ++ +IS P+G++
Sbjct: 121 YESNVVFVMRYMVDAGIVGANWITLPANQYLTRSNPNTTCQFEMDVMWQKLISHDPDGDW 180
Query: 297 SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
K+AP RILSFDIECAGRKG FPEP DPVIQ+AN VT+QG P ++N+ TLKSCA I
Sbjct: 181 LKIAPLRILSFDIECAGRKGCFPEPDKDPVIQIANWVTIQGMDTPIVKNIFTLKSCAAIS 240
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
G +V SFE E ++L WRDF+ DPD++ GYNI FD+PYL+++
Sbjct: 241 GAEVHSFEDESEMLQGWRDFVIACDPDILTGYNIVGFDIPYLMDR 285
>gi|358375619|dbj|GAA92199.1| DNA polymerase delta large chain [Aspergillus kawachii IFO 4308]
Length = 1105
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/621 (64%), Positives = 499/621 (80%), Gaps = 11/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 483 QKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA ++ LVIPN K +++ YEGATV+E G+Y PIATLD
Sbjct: 543 FLLSRGQQVKFISQLFRKALEQQLVIPNTK--SNDEQDYEGATVIEPVRGYYGVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ +L L E TP+G+ F + ++KG+L +ILE
Sbjct: 601 FASLYPSIIQAHNLCYTTLLNKNSVERLKLVKDEDYIVTPNGDMFCTAKVRKGLLSQILE 660
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS T
Sbjct: 661 ELLSARKRAKKELATETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTT 720
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++T GY H+A+VIYGDTDSVMV+FGV +E AMKLG+EA++Y
Sbjct: 721 SYGRQMIEKTKQEVEARYTIANGYSHDAKVIYGDTDSVMVKFGVDNLEEAMKLGQEASEY 780
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWTNP K+DKMDTKGIETVRRDNCLLV+N
Sbjct: 781 VSSKFLKPIKLEFEKVYFPYLLINKKRYAGLYWTNPNKYDKMDTKGIETVRRDNCLLVQN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L KILV+RDI GA YVK TISDLL N++D+S LVITK L+K D Y K AHVE
Sbjct: 841 VIETVLQKILVERDIDGAQDYVKDTISDLLQNKIDMSKLVITKALSK--DAYTAKQAHVE 898
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVIIK A G+K YERSEDPIYVLENNIPIDT YYL+NQ+
Sbjct: 899 LAERMRKRDAGSAPTLGDRVAYVIIKGAGGSKNYERSEDPIYVLENNIPIDTKYYLDNQL 958
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+ PL RIFEPIL + + +LL+G+HTR+IS++ P+ G+MKFAK+ +C+GCK +S
Sbjct: 959 ANPLGRIFEPILGEKKASQLLTGEHTRAISVAAPTMGGLMKFAKKTQTCLGCKKPLSGKE 1018
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +C++C+ R ELY K++++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1019 EAEGAVCAYCRPRLGELYTKSLTKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIF 1078
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A+ +L R++
Sbjct: 1079 YMRMKAKKDVEDAQKELSRFD 1099
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/415 (38%), Positives = 226/415 (54%), Gaps = 62/415 (14%)
Query: 5 NGSARKRPPPT------PKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLI 58
NG A PPT P S P K Q + E L++ L +D L
Sbjct: 37 NGPAAAMKPPTNGQRRVPGSSQPQKSQ--------FEAEVLEK--------LTQDINGLK 80
Query: 59 LRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAA 118
+ E+ Q +W RPPL + ++I FQQ+D E + G A
Sbjct: 81 DSNSEKDQ-------QWERPPLGE-FDPSTENICFQQIDA---------EEGTIMGGKTA 123
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+ R+FGVT G SV V GF+ Y YI+ P DD + LE S+V Q
Sbjct: 124 V-RLFGVTEAGQSVLLHVTGFQHYLYIAAPVNFTKDDCEPYRAFLE---------SRVGQ 173
Query: 179 F---VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG----IQLDGLGM 231
F ++ +++ + +I +Q + +LKI V P ++ R L++G + GL
Sbjct: 174 FQPTIQSVQITMRENIYGFQGNQKSYYLKITVTDPKFISKVRSALEQGGAQSLNYKGLWN 233
Query: 232 KS---FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSD 286
S +T++S + + LRFMID +I G +W+E GKYR + + +S CQ+E Y D
Sbjct: 234 NSDGGILTFDS-IQYLLRFMIDTDISGMSWVEAKAGKYRLFQQHEKVSNCQIEASVDYRD 292
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
+IS P GE++KMAP RILSFDIECAGRKG FPEP HDPVIQ+AN+VT GE +PFIRNV
Sbjct: 293 LISHPPNGEWAKMAPLRILSFDIECAGRKGIFPEPNHDPVIQIANVVTRYGESKPFIRNV 352
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
L +C+ IV ++ F+ E +L+AWRDF+++VDPDV+IGYNI FD PYL+++
Sbjct: 353 FVLDTCSLIVNTQILEFKDEAKMLMAWRDFVQKVDPDVIIGYNIANFDFPYLLDR 407
>gi|384248668|gb|EIE22151.1| DNA polymerase delta subunit one [Coccomyxa subellipsoidea C-169]
Length = 1116
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/644 (63%), Positives = 505/644 (78%), Gaps = 34/644 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLK----------------DAYLPQRLLDKLMF 443
+KEDVHHSIISDLQ GN ETRRRLAVYCLK DAYLPQRL+DKLM+
Sbjct: 473 QKEDVHHSIISDLQAGNEETRRRLAVYCLKARYHCADMALTHRNMQDAYLPQRLVDKLMY 532
Query: 444 IFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPN---VKQAGSEQGTYEG 500
++NY+EMARVTGVP+SFLL+RGQSIKV SQ+LRKA+QKNL++PN ++ A + YEG
Sbjct: 533 MYNYIEMARVTGVPMSFLLTRGQSIKVFSQILRKARQKNLLVPNQPRMQGATGDGVAYEG 592
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG 560
ATVL+A+ GFY+ P+ATLDFASLYPSIMMA+NLCYSTL+ P+ ++L+ PE V + P+G
Sbjct: 593 ATVLDAKQGFYKTPVATLDFASLYPSIMMAHNLCYSTLLPPDRVKELS--PEDVLRCPTG 650
Query: 561 ETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGF 620
FV++ KGILPEILEELL ARKRAKADLK A DP KAVLDGRQLALK+SANSVYGF
Sbjct: 651 HCFVRAARAKGILPEILEELLGARKRAKADLKAASDPFMKAVLDGRQLALKVSANSVYGF 710
Query: 621 TGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQF 680
TGA +G++PC+EIS+SVT++GR MI+HTKKLVE+++ GYE + +VIYGDTDSVMV F
Sbjct: 711 TGAVIGKMPCLEISASVTAFGRNMIDHTKKLVEERYQRKNGYEADCDVIYGDTDSVMVHF 770
Query: 681 GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM 740
V + AM+LGREAAD++S TF+KPIKLEFEKVY PYLLI+KKRYAGL +T P+K+DKM
Sbjct: 771 RVKDIGRAMELGREAADFVSKTFVKPIKLEFEKVYKPYLLINKKRYAGLLYTKPDKYDKM 830
Query: 741 DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVIT 800
DTKGIETVRRDNC LV+ +V+ CL IL++ D GA YV++TISDLLMNR+DLSLLVIT
Sbjct: 831 DTKGIETVRRDNCQLVRTVVSTCLEMILINEDEEGAKAYVRATISDLLMNRLDLSLLVIT 890
Query: 801 K-----GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERS 855
K L++ Y K HVELA++MRKRD ATAP VGDRV YV IKAAKG KAY+++
Sbjct: 891 KARTQSALSRADTAYAAKQGHVELAKKMRKRDPATAPTVGDRVAYVHIKAAKGVKAYDKA 950
Query: 856 EDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGD---HTRSISISTPS 912
EDPIY LE+N+PID +YL++ + +PL R+F P++ N KEL++G HTRSI+++TPS
Sbjct: 951 EDPIYALEHNLPIDFQHYLDHHLEQPLQRLFGPMMNN-PKELMTGGAGAHTRSIALATPS 1009
Query: 913 --NSGIMKFAKRQLSCIGCKALISNGT--LCSHCKGREAELYCKTVSQVQELEVLFGRLW 968
+ GIM+FAK +LSC+ C+ + G LC HC+ +E E+Y K++ V ELE F LW
Sbjct: 1010 THSGGIMRFAKVRLSCLSCRTPLLPGVSDLCDHCRPKEVEIYHKSLGAVNELEQQFAALW 1069
Query: 969 TQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRW 1012
TQCQ CQGSLHQDVLCTSRDCPIFYRRKK QKD+ EA L R+
Sbjct: 1070 TQCQRCQGSLHQDVLCTSRDCPIFYRRKKVQKDLGEAHTLLQRF 1113
Score = 369 bits (946), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 187/377 (49%), Positives = 246/377 (65%), Gaps = 11/377 (2%)
Query: 35 DDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLA--KWARPPLSSGYVSQCQSIM 92
DDE ++E L +D E + +R +E+ + A W RP + S+
Sbjct: 28 DDELVEEQFEAVPENLEDDGEDVDVRLLEEDLELHLGEAGRNWKRPD-PPPRCTATDSLA 86
Query: 93 FQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMG 152
FQQLD+DY IG N++L I+R++GVT G+SVC VHGFEPYFYI P+ G
Sbjct: 87 FQQLDVDYFIGPPNQQLYRTDLSEVPILRMYGVTEHGNSVCTYVHGFEPYFYIEAPRSFG 146
Query: 153 PDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM 212
PDD L R +R +P+F + MVQK++IM+YQ QKS+ FL+I VA P +
Sbjct: 147 PDDCDSLCAQLNVRF---HRICAIPKFCLGVAMVQKQTIMHYQPQKSRTFLRITVATPNL 203
Query: 213 VASCRGILDRGIQLDGLGMK-SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR---- 267
V RG+L+ GI +D L +FMTYES+VLFALRFMIDC+IVGGNW+E+ G Y
Sbjct: 204 VTQARGMLEHGINVDSLQRHMAFMTYESHVLFALRFMIDCDIVGGNWVELKAGAYSLLNL 263
Query: 268 KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVI 327
+ + S+CQLE +S+IIS EG++ K+APFRILS DIECAGRKGHFPE DPVI
Sbjct: 264 EDPRKQSHCQLEAHVHFSNIISHPAEGDWLKLAPFRILSVDIECAGRKGHFPEAEKDPVI 323
Query: 328 QVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIG 387
Q+A+LVT QG+ +P +RNVMTL +CA IVG +VMSF+ E D+L WRD + E DPD++IG
Sbjct: 324 QIASLVTEQGQSKPLVRNVMTLDTCAAIVGAEVMSFDKEEDLLKRWRDLVIETDPDIIIG 383
Query: 388 YNICKFDLPYLIEKEDV 404
YNIC FDLPYLI++ +
Sbjct: 384 YNICNFDLPYLIKRAET 400
>gi|145251457|ref|XP_001397242.1| DNA polymerase delta catalytic subunit [Aspergillus niger CBS 513.88]
gi|134082776|emb|CAK48550.1| unnamed protein product [Aspergillus niger]
gi|350636552|gb|EHA24912.1| hypothetical protein ASPNIDRAFT_210383 [Aspergillus niger ATCC 1015]
Length = 1105
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/621 (64%), Positives = 499/621 (80%), Gaps = 11/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 483 QKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA ++ LVIPN K +++ YEGATV+E G+Y PIATLD
Sbjct: 543 FLLSRGQQVKFISQLFRKALEQQLVIPNTK--SNDEQDYEGATVIEPVRGYYGVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ +L L E TP+G+ F + ++KG+L +ILE
Sbjct: 601 FASLYPSIIQAHNLCYTTLLNKSSVERLKLVKDEDYIVTPNGDMFCTAKVRKGLLSQILE 660
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS T
Sbjct: 661 ELLSARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTT 720
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++T GY H+A+VIYGDTDSVMV+FGV +E AMKLG+EA++Y
Sbjct: 721 SYGRQMIEKTKQEVEARYTIANGYSHDAKVIYGDTDSVMVKFGVDNLEEAMKLGQEASEY 780
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWTNP K+DKMDTKGIETVRRDNCLLV+N
Sbjct: 781 VSSKFLKPIKLEFEKVYFPYLLINKKRYAGLYWTNPNKYDKMDTKGIETVRRDNCLLVQN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L KILV+RDI GA YVK TISDLL N++D+S LVITK L+K D Y K AHVE
Sbjct: 841 VIETVLQKILVERDIDGAQDYVKDTISDLLQNKIDMSKLVITKALSK--DAYTAKQAHVE 898
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVIIK A G+K YERSEDPIYVLENNIPIDT YYL+NQ+
Sbjct: 899 LAERMRKRDAGSAPTLGDRVAYVIIKGAGGSKNYERSEDPIYVLENNIPIDTKYYLDNQL 958
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+ PL RIFEPIL + + +LL+G+HTR+IS++ P+ G+MKFAK+ +C+GCK +S
Sbjct: 959 ANPLGRIFEPILGEKKASQLLTGEHTRAISVAAPTMGGLMKFAKKTQTCLGCKKPLSGKE 1018
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +C++C+ R ELY K++++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1019 EAEGAVCAYCRPRLGELYTKSLTKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIF 1078
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A+ +L R++
Sbjct: 1079 YMRMKAKKDVEDAQKELSRFD 1099
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/415 (38%), Positives = 226/415 (54%), Gaps = 62/415 (14%)
Query: 5 NGSARKRPPPT------PKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLI 58
NG A PPT P S P K Q ++E L++ L +D L
Sbjct: 37 NGPAAAMKPPTNGQRRVPGSSQPQKSQ--------FEEEVLEK--------LTQDINGLK 80
Query: 59 LRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAA 118
+ E+ Q +W RPPL + ++I FQQ+D E + G A
Sbjct: 81 DSNSEKDQ-------QWERPPLGE-FDPSTENICFQQIDA---------EEGTIMGGKTA 123
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+ R+FGVT G SV V GF+ Y YI+ P DD + LE S+V Q
Sbjct: 124 V-RLFGVTEAGQSVLLHVTGFQHYLYIAAPVNFTKDDCEPYRAFLE---------SRVGQ 173
Query: 179 F---VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG----IQLDGLGM 231
F ++ +++ + +I +Q + +LKI V P ++ R L++G + GL
Sbjct: 174 FQPTIQSVQITMRENIYGFQGNQKSYYLKITVTDPKFISKVRSALEQGGAQSLNYKGLWN 233
Query: 232 KS---FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSD 286
S +T++S + + LRFMID +I G +W+E GKYR + + +S CQ+E Y D
Sbjct: 234 NSDGGILTFDS-IQYLLRFMIDTDISGMSWVEAKAGKYRLFQQHEKVSNCQIEASVDYRD 292
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
+IS P GE++KMAP RILSFDIECAGRKG FPEP DPVIQ+AN+VT GE +PFIRNV
Sbjct: 293 LISHPPNGEWAKMAPLRILSFDIECAGRKGIFPEPNQDPVIQIANVVTRYGESKPFIRNV 352
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
L +C+ IV ++ F+ E +L+AWRDF+++VDPDV+IGYNI FD PYL+++
Sbjct: 353 FVLDTCSLIVNTQILEFKDEGKMLMAWRDFVQKVDPDVIIGYNIANFDFPYLLDR 407
>gi|392574795|gb|EIW67930.1| hypothetical protein TREMEDRAFT_69477 [Tremella mesenterica DSM 1558]
Length = 1056
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/618 (64%), Positives = 486/618 (78%), Gaps = 7/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++LQNG A++RRRLAVYCLKDAYLPQRLLDKLM NY EMARVTGVP +
Sbjct: 437 QKEDVHHSIITELQNGTADSRRRLAVYCLKDAYLPQRLLDKLMSFVNYTEMARVTGVPFN 496
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL R + +IP +K GS++ YEGATV+E G+Y+ PIATLD
Sbjct: 497 YLLTRGQQIKVISQLFRASADSGYIIPAMKSEGSDE-QYEGATVIEPTKGYYDVPIATLD 555
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+NLCY+TL+ +L L E TP+ + F + +KG+LP +L
Sbjct: 556 FASLYPSIMMAHNLCYTTLLDKGTIERLKLVEGEDYVHTPNNDYFATTKRRKGLLPTVLR 615
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL ARKRAK DLK KDP +AVLDGRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 616 NLLDARKRAKQDLKVEKDPFRRAVLDGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 675
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GRQMIE TK+ VE +F GYE++A+VIYGDTDSVMV+FG P + AM+LG EAA+
Sbjct: 676 AFGRQMIEFTKQQVEAEFCVANGYENDAKVIYGDTDSVMVRFGTPDLATAMRLGAEAAEL 735
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVY+PYLLISKKRYAGLYWT EK+DKMDTKGIETVRRDNC LV
Sbjct: 736 VSAKFIKPIKLEFEKVYFPYLLISKKRYAGLYWTKTEKYDKMDTKGIETVRRDNCRLVST 795
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DRD+ GA YVKSTISDLL N++D+S LVITK L K DY K AHVE
Sbjct: 796 VIETCLFKMLIDRDVKGAEDYVKSTISDLLQNKIDMSQLVITKALAKA--DYAAKQAHVE 853
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRDA +AP +GDRV YVIIK KGA AYE+SEDP+YVLE+N+PIDT YYLENQ+
Sbjct: 854 LAERMKKRDAGSAPALGDRVAYVIIKGIKGAAAYEKSEDPLYVLEHNVPIDTRYYLENQL 913
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKA-LISN-- 935
SKPL+RIFEPIL + LLSG+HTR+I I+TP+ G+MKFA + ++C+GCK L SN
Sbjct: 914 SKPLMRIFEPILGEKANTLLSGEHTRTIQIATPTVGGLMKFAVKTVTCLGCKTPLRSNKE 973
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C +C+ + ELY K V+Q L++ F RLWTQCQ CQGSLHQDV+CTS DCPI+YRR
Sbjct: 974 SAVCINCRSKLPELYAKQVAQTSTLQIDFARLWTQCQRCQGSLHQDVICTSADCPIYYRR 1033
Query: 996 KKAQKDMAEAKLQLDRWN 1013
QK++A + QLDR++
Sbjct: 1034 TARQKEVAASVSQLDRFD 1051
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/321 (44%), Positives = 199/321 (61%), Gaps = 25/321 (7%)
Query: 87 QCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYIS 146
Q SI FQQ++I+ S +L P +R+FGVT+ G+SV +HGF+PYFY++
Sbjct: 60 QTDSIAFQQIEIEEA---SEAKLGP-------TLRLFGVTQNGNSVLAHIHGFKPYFYVA 109
Query: 147 CPQGMGPDDISHFHQILEGRMREANRNSKVPQF---VRHIEMVQKRSIMYYQQQKSQPFL 203
P G D+ ++ NS V V +V ++S+ Y+ PF+
Sbjct: 110 APSGFLNKDLDPLKDMI---------NSTVTSLGPAVHSCIVVNRKSLWGYRGDDQVPFI 160
Query: 204 KIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP 262
KI P + +G +RG I +GL MTYESN+ + +RFMID +VG NW+E+P
Sbjct: 161 KITCTDPKNLPKVKGAFERGQIDFNGLFPPEIMTYESNIAYTMRFMIDTGVVGMNWVELP 220
Query: 263 VGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPE 320
GKY + ++ S CQ+E Y D+IS PEGE+ K+AP RI+SFDIECAGRKG FPE
Sbjct: 221 GGKYEVLEGSEKRSLCQIEVMAEYKDLISHAPEGEWLKIAPLRIMSFDIECAGRKGIFPE 280
Query: 321 PTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREV 380
DPVIQ+A +VT QGE +PF+RNV TL +CA IVG V+ F+ E+ +L+ WR F++EV
Sbjct: 281 AHIDPVIQIAAMVTRQGESKPFVRNVFTLNTCAHIVGSQVLEFKDEKQLLIEWRKFVQEV 340
Query: 381 DPDVMIGYNICKFDLPYLIEK 401
DPD++IGYNI FDLPYL+++
Sbjct: 341 DPDMVIGYNIANFDLPYLLDR 361
>gi|430812887|emb|CCJ29720.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1088
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/620 (64%), Positives = 488/620 (78%), Gaps = 11/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG +E+RRRLAVYCLKDA+LPQRL+DKLM + NY+EM+RVTGVP S
Sbjct: 471 QKEDVHHSIITDLQNGTSESRRRLAVYCLKDAHLPQRLMDKLMSLVNYIEMSRVTGVPFS 530
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IK++SQL RKA+++ +IPN++ GS++ YEGATV+E + G+Y PI TLD
Sbjct: 531 YLLSRGQQIKIISQLSRKAREEGFIIPNIRSDGSDE-QYEGATVIEPKKGYYNVPIVTLD 589
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPE---CVNKTPSGETFVKSNLQKGILPEI 576
F+SLYPSIM A+NLCY+TL+ + L + CV TP FVKS+++KG+LP+I
Sbjct: 590 FSSLYPSIMQAHNLCYTTLLNYKQIETLGFEKDKDYCV--TPENYCFVKSHIRKGLLPQI 647
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
E LLAAR++ K DLK DP +KAVLDGRQLALKISANSVYGFTGAT G+LPC+ ISSS
Sbjct: 648 FENLLAARQKVKIDLKNETDPFKKAVLDGRQLALKISANSVYGFTGATNGKLPCLPISSS 707
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
VTSYGRQMIE K+ +E K+T GY H A VIYGDTDSVM+ FGV + +MKLG EAA
Sbjct: 708 VTSYGRQMIERAKEEIELKYTIENGYSHKAYVIYGDTDSVMINFGVKDISESMKLGYEAA 767
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
DY++ IKPIKLEFEKVY+PYLLISKKRYAGL+WT PE FDK+D+KGIET+RRDNC LV
Sbjct: 768 DYVTNKLIKPIKLEFEKVYFPYLLISKKRYAGLFWTKPETFDKIDSKGIETIRRDNCRLV 827
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
++ L K+L+D+D+ GA YVK ISDLL N++D+S LVITK LTK+ DY K AH
Sbjct: 828 STVIETILRKLLIDQDVDGAQNYVKRVISDLLQNKIDMSNLVITKTLTKS--DYISKQAH 885
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELAER+RKRD+ AP +GDRV Y+I+K AKG + + RSEDPIYVLENNIPIDT YYL+N
Sbjct: 886 VELAERIRKRDSGLAPTLGDRVAYIIVKGAKGDQTFLRSEDPIYVLENNIPIDTKYYLDN 945
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS-- 934
Q+SKPLLRIFEPIL + LLSGDHTR+IS+++P+ G+MKF + +CIGCK +
Sbjct: 946 QLSKPLLRIFEPILGEKANSLLSGDHTRTISMTSPAIGGLMKFTVKTATCIGCKIPLKNG 1005
Query: 935 -NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
NG +C+HC GR AELY K ++ V +LE+ F +LWTQCQ CQ SLHQDVLCTS+DCPIFY
Sbjct: 1006 YNGAVCNHCIGRTAELYQKQLNIVSDLEIHFAKLWTQCQRCQSSLHQDVLCTSKDCPIFY 1065
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
RKK QKDM E L+R+N
Sbjct: 1066 MRKKVQKDMKENIETLERFN 1085
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 206/354 (58%), Gaps = 19/354 (5%)
Query: 49 LLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRE 108
+D E + R +E Q + KW RP L I FQQ++ID +
Sbjct: 60 FFEKDLECITHRLLENEQGKHNENQKWERPVLPP-IDPINDDIYFQQIEIDDTM------ 112
Query: 109 LLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR 168
S S IR++GVT + +SV C V GF PYFY+ P + IS F LE +
Sbjct: 113 -----SVSGPTIRLYGVTEQENSVLCIVTGFFPYFYVPSPHSFSEEHISSFKIALENTIN 167
Query: 169 EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLD 227
NR V +IE+V ++SI +Q + F+KI+V P +A R +RG I D
Sbjct: 168 SGNR------VVNNIELVTRQSIYGFQGDEKSLFIKIIVNDPKYIARIRSSFERGDINFD 221
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDI 287
+ ++T+ESN+ + LRFMID +I G WI +P KY + S CQLE + ++
Sbjct: 222 NMFPPQYITFESNIPYVLRFMIDASITGMCWIRLPKTKYSIINEKTSNCQLEVSISWENL 281
Query: 288 ISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVM 347
S PEG + K+AP RILSFDIECAGRKG FPEP DPVIQ+AN VTL GEK PFIRNV
Sbjct: 282 DSLQPEGNWQKIAPLRILSFDIECAGRKGIFPEPEIDPVIQIANTVTLYGEKIPFIRNVF 341
Query: 348 TLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
T+ +CA I G ++S+ ++++LL+W F+++ DPDV+IGYNI FD+PYLI++
Sbjct: 342 TIDTCAQISGTQILSYVDQKELLLSWSKFVQKADPDVIIGYNIANFDIPYLIDR 395
>gi|343428135|emb|CBQ71665.1| probable DNA polymerase delta catalytic subunit [Sporisorium
reilianum SRZ2]
Length = 1057
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/617 (63%), Positives = 491/617 (79%), Gaps = 6/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQN E+RRRLAVYCLKDAYLPQRL+DKLM NY+EMARVTGVP +
Sbjct: 441 QKEDVHHSLITELQNAGPESRRRLAVYCLKDAYLPQRLMDKLMCFINYIEMARVTGVPFN 500
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RKA + N ++P K G+E YEGATVLE +AG+Y++PIATLD
Sbjct: 501 YLLSRGQQIKVVSQLFRKANEDNYLVPAYKGEGTED-QYEGATVLEPKAGYYDRPIATLD 559
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPS+MMA+NLCY+TL+ + +L L E TP+ F L+KG+LP +LE
Sbjct: 560 FASLYPSVMMAHNLCYTTLLDKKTIDRLELKQDEDYVITPNNNCFATKKLRKGLLPTVLE 619
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LLAARKRAKADLK+ DP ++AVLDGRQLALKISANSVYGFTGAT+G+LPC+EIS S T
Sbjct: 620 NLLAARKRAKADLKKETDPFKRAVLDGRQLALKISANSVYGFTGATIGKLPCLEISMSTT 679
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK VE +T GYEH+AEV+YGDTDSVM++FGVP + AM+LG EAA
Sbjct: 680 AYGRQMIEQTKTYVERHYTIANGYEHDAEVVYGDTDSVMIKFGVPDLAKAMELGAEAAGL 739
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S TF+ PIKLEFEKVY+PYLLISKKRYAGLYWT PEK+DKMDTKGIETVRRDNC LV+
Sbjct: 740 VSKTFVDPIKLEFEKVYFPYLLISKKRYAGLYWTRPEKYDKMDTKGIETVRRDNCRLVQT 799
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DRD+ GA +Y K+ ISDLL N++D+S LVITK L K+ DY K AHVE
Sbjct: 800 VIDTCLRKMLIDRDVKGAEEYAKNIISDLLQNKVDMSQLVITKALAKS--DYAAKQAHVE 857
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVI+KAAKGA AYERSEDPIYVL++NIPIDT YYLENQ+
Sbjct: 858 LAERMRKRDAGSAPALGDRVAYVIVKAAKGAAAYERSEDPIYVLDHNIPIDTRYYLENQL 917
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--SNG 936
+KPLLRIFEPI+ + +L+G+HTR + ++T + +MKFA + + C+GC+ + N
Sbjct: 918 AKPLLRIFEPIMGPKASTMLNGEHTRVVQVATSNVGALMKFAVKTVQCLGCRTPLKDQNA 977
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
+C +C+ R A+LY + +++ LEV F RLWT CQ CQGSL QDVLCT++DCPIF++RK
Sbjct: 978 PVCKNCRPRVAQLYHEKLARASALEVEFARLWTCCQRCQGSLAQDVLCTNKDCPIFFKRK 1037
Query: 997 KAQKDMAEAKLQLDRWN 1013
+AQKD+ +A + R++
Sbjct: 1038 RAQKDVEDAVNVVQRFD 1054
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 200/342 (58%), Gaps = 41/342 (11%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
A W RP L V + FQQ+DI+ + G IR++GVT EGHSV
Sbjct: 52 ALWPRPYLEPLDVDH-DHVTFQQIDIEE----------HQAVGQPPAIRMYGVTVEGHSV 100
Query: 133 CCKVHGFEPYFYISCPQGMGP----DDISHFHQILEGRMREANRNSKVPQFVRHIEMVQK 188
C +HGF PYFYI P+G D +H + + GR V E+V K
Sbjct: 101 CAHIHGFLPYFYIHAPRGFTANTCNDFTNHLNVLFGGRS------------VHKSEIVSK 148
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF-------MTYESNV 241
+S+M Y Q++ F+K+ ++ + RG +RG +G + +TYE N+
Sbjct: 149 KSLMGYAGQENVAFIKLTISDLRSLPRIRGSFERG----EIGFRDLFTPGDASLTYE-NI 203
Query: 242 LFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKM 299
+ LRFMID IVG NWI V Y R ++ +S CQ+E DC I+S P+ E+SK+
Sbjct: 204 TYTLRFMIDLKIVGMNWIRVQPANYKLRPDSQKVSLCQIELDCSCDAIVSHAPDDEWSKI 263
Query: 300 APFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVD 359
AP RILSFDIECAGRKG FPEP+ DPVIQ+AN+VT QGE PF++NV TL +C+ IVG
Sbjct: 264 APLRILSFDIECAGRKGVFPEPSIDPVIQIANMVTRQGESTPFVKNVFTLNTCSHIVGSQ 323
Query: 360 VMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V+SF E D+L AW F++EVDPDV+IGYNI FD PYL+++
Sbjct: 324 VLSFNKEIDMLEAWTKFVQEVDPDVVIGYNIANFDFPYLLDR 365
>gi|410902099|ref|XP_003964532.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Takifugu
rubripes]
Length = 1104
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/619 (65%), Positives = 492/619 (79%), Gaps = 7/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL KLM + NY+EMARVTGVP++
Sbjct: 489 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLT 548
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQLLR+A +++LV+P VK G E Y GATV+E G+Y PIATLD
Sbjct: 549 YLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGED--YTGATVIEPEKGYYSIPIATLD 606
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ K +L PE KTP+G FVKS+++KG+LPEILE
Sbjct: 607 FSSLYPSIMMAHNLCYTTLLQ-NTQDKDSLSPEDFIKTPTGNFFVKSSVRKGLLPEILEN 665
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+LK+ DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 666 LLSARKRAKAELKKETDPFKRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTG 725
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ +A+VIYGDTDSVMV+ GV TV AM +GREAA+++
Sbjct: 726 FGRQMIEQTKQLVESKYTISNGYQADAKVIYGDTDSVMVKLGVATVNEAMSIGREAAEWV 785
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKN 758
S FI PIKLEFEKVYYPYLLI+KKRYAGLY+ ++ + DKMD KGIETVRRDNC LV N
Sbjct: 786 SSHFISPIKLEFEKVYYPYLLINKKRYAGLYFSSSADTHDKMDCKGIETVRRDNCPLVAN 845
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL KIL+DRD GAV + K ISDLL NR+D+S LVITK LT+T +Y K AHVE
Sbjct: 846 LINTCLQKILIDRDPQGAVDHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGKQAHVE 905
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +APN+GDRVPYVI KAAKGA AY +SEDPIYVLEN+IPIDT YYLE Q+
Sbjct: 906 LAERMRKRDAGSAPNLGDRVPYVITKAAKGAAAYMKSEDPIYVLENSIPIDTQYYLEQQL 965
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-SN 935
SKPLLRIFEPIL + E LL GDHTR ++ T G+M FA+++ +CIGC+A++ ++
Sbjct: 966 SKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCRAVLKTD 1025
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C CK +E+ELY K + + LE F RLWTQCQ CQGSLH+DVLCTSRDCPIFY R
Sbjct: 1026 AAVCDFCKKKESELYQKEIYHLNTLEERFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMR 1085
Query: 996 KKAQKDMAEAKLQLDRWNF 1014
KK QKD+ + + R+ +
Sbjct: 1086 KKVQKDLDDQSKLVSRFGW 1104
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 235/402 (58%), Gaps = 20/402 (4%)
Query: 16 PKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQD-FASRL-A 73
P+ W K + ++E +FLD + ED+E D+ D F + L
Sbjct: 16 PQSKWAKKNTEWEDSPSQFEEEL---SMFLDADMDIEDQEGQASHDVIPVGDLFTTDLNP 72
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+W RPP + +++FQQ+D+DY +G + + S G A I+R+FGVT G+SVC
Sbjct: 73 RWRRPP-APALDPSTDTLVFQQIDLDYYLGVTAAGMPGQSQGKAPIVRMFGVTDNGNSVC 131
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C +HGF PYFY+ P G + F + L + + R++K + V +++ +K ++
Sbjct: 132 CHIHGFAPYFYVPAPNGFTSAHLGEFQKELNSAVLKDMRSNKDNISVTVLAVDIARKENM 191
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y ++ FL+I +A+P ++A + +L++G++ + + +E+N+ F +RFM+D
Sbjct: 192 YGYHGKRILDFLRITMAMPRLIAPAKRLLEQGLKFGPFPLHYYQAFEANIDFEIRFMVDT 251
Query: 252 NIVGGNWIEVPVGKYR------------KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKM 299
N+VG WIE+P GKYR + +S+CQ E D ++D IS EG++ ++
Sbjct: 252 NVVGCCWIELPKGKYRVREENDLLVTDSQCLGKVSFCQYEVDIGWTDFISHPAEGDWQRI 311
Query: 300 APFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVD 359
AP R+LSFDIECAGRKG FPE DPVIQ+A++V QGE +PFIR V TL+SCA IVG
Sbjct: 312 APLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGETEPFIRTVFTLQSCASIVGSQ 371
Query: 360 VMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++ F E +L +W +F+R VDPD++ GYNI FD PYL+ +
Sbjct: 372 ILCFTQETKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNR 413
>gi|169775879|ref|XP_001822406.1| DNA polymerase delta catalytic subunit [Aspergillus oryzae RIB40]
gi|238502533|ref|XP_002382500.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
flavus NRRL3357]
gi|83771141|dbj|BAE61273.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220691310|gb|EED47658.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
flavus NRRL3357]
gi|391871049|gb|EIT80215.1| DNA polymerase delta, catalytic subunit [Aspergillus oryzae 3.042]
Length = 1104
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/622 (63%), Positives = 499/622 (80%), Gaps = 11/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 482 QKEDVHHTMITELHNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLINYTEMARVTGVPFN 541
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA ++ LVIPN SEQ YEGATV+E G+Y PIATLD
Sbjct: 542 FLLSRGQQVKFMSQLFRKALEQQLVIPN-NTPESEQ-EYEGATVIEPVRGYYNVPIATLD 599
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ + + NL E TP+G+ F + ++KG+L +ILE
Sbjct: 600 FASLYPSIIQAHNLCYTTLLNKKAVERYNLKKDEDYIVTPNGDLFCTTKVRKGLLSQILE 659
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARKRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS T
Sbjct: 660 ELLAARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTT 719
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++T GY H+A+VIYGDTDSVMV+FGV + AMKLG+EA++Y
Sbjct: 720 SYGRQMIEKTKQEVEARYTIANGYSHDAKVIYGDTDSVMVKFGVTELADAMKLGQEASEY 779
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT EK+DKMDTKGIETVRRDNCLLV+N
Sbjct: 780 VSSKFLKPIKLEFEKVYFPYLLINKKRYAGLYWTKTEKYDKMDTKGIETVRRDNCLLVQN 839
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ LHKIL+DRD+ A +YVK TISDLL N++D+S LVITK L+K+ DY K AHVE
Sbjct: 840 VIETVLHKILIDRDVDSAQEYVKETISDLLQNKVDMSKLVITKALSKS--DYAAKQAHVE 897
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+NQ+
Sbjct: 898 LAERMKKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDNQL 957
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+ PL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK +S
Sbjct: 958 ANPLGRIFEPILGEKKAGQLLTGEHTRSISVAAPTMGGLMKFAKKTATCMGCKKPLSGKA 1017
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +C HC+ R ELY +++++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1018 EMAGAVCEHCQPRLGELYTRSLTKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIF 1077
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A+ +L R++F
Sbjct: 1078 YMRMKAKKDVEDAQKELSRFDF 1099
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 209/359 (58%), Gaps = 28/359 (7%)
Query: 53 DEESL--ILRDIEQRQDF-ASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
+EE L + +DI +D A + +W RPPL + +++ FQQ+D + L
Sbjct: 66 EEEVLEKLTQDINDLKDSNAEKDQQWERPPLGE-FDPTKENVCFQQIDAE------EGTL 118
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
L G +R+FGVT G SV V GF+ Y YI+ P +D + LE R+
Sbjct: 119 L----GGKPAVRLFGVTEAGQSVLLHVTGFQHYLYIAAPVNFTKEDCDPYRAFLESRI-- 172
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQ---L 226
++ +++ + +I YQ + +LKI V P ++ RG L+ G Q
Sbjct: 173 ----GNFQTMIQSVQVTLRENIYGYQGNQKSWYLKITVTEPKFISKLRGALENGGQSMNY 228
Query: 227 DGL--GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDC 282
GL G++ T++ N+ + LRFMID NI G +W+E GKYR + S CQ+E
Sbjct: 229 KGLWTGIEKIATFD-NIQYLLRFMIDTNISGMSWVEAKAGKYRLIHEKEKHSNCQIEAVV 287
Query: 283 LYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPF 342
Y D+I+ P GE++KMAP RILSFDIECAGRKG FPEP DPVIQ+AN+VT GE +PF
Sbjct: 288 DYHDLIAHPPNGEWAKMAPLRILSFDIECAGRKGIFPEPNQDPVIQIANVVTRYGESKPF 347
Query: 343 IRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
IRNV L +C+ IV ++ FE E +L+AWRDF+++VDPDV+IGYNI FD PYL+++
Sbjct: 348 IRNVFVLDTCSLIVNTQILEFEKEEKMLMAWRDFVQKVDPDVIIGYNIANFDFPYLLDR 406
>gi|443899075|dbj|GAC76406.1| ribonucleotide reductase, alpha subunit [Pseudozyma antarctica T-34]
Length = 1160
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/630 (62%), Positives = 496/630 (78%), Gaps = 7/630 (1%)
Query: 388 YNICKFDLPYLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFN 446
Y++ +L E KEDVHHS+I++LQN E+RRRLAVYCLKDAYLPQRL+DKLM N
Sbjct: 531 YSLNSVSFEFLGEQKEDVHHSLITELQNAGPESRRRLAVYCLKDAYLPQRLMDKLMCFIN 590
Query: 447 YVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEA 506
Y+EMARVTGVP ++LLSRGQ IKV+SQL RKA + N ++P K G+E YEGATVLE
Sbjct: 591 YIEMARVTGVPFNYLLSRGQQIKVVSQLFRKANEDNYLVPAYKGEGTED-QYEGATVLEP 649
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVK 565
+AG+Y++PIATLDFASLYPS+MMA+NLCY+TL+ + +L+L E TP+ F
Sbjct: 650 KAGYYDRPIATLDFASLYPSVMMAHNLCYTTLLDKKTIDRLDLKQDEDYVVTPNNNCFAT 709
Query: 566 SNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV 625
L+KG+LP +LE LLAARKRAKADLK+ DP ++AVLDGRQLALKISANSVYGFTGAT+
Sbjct: 710 KKLRKGLLPTVLENLLAARKRAKADLKKETDPFKRAVLDGRQLALKISANSVYGFTGATI 769
Query: 626 GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTV 685
G+LPC+EIS S T+YGRQMI+ TK VE +T GY+H+AEV+YGDTDSVM++FGVP +
Sbjct: 770 GKLPCLEISMSTTAYGRQMIDQTKAYVERHYTIANGYQHDAEVVYGDTDSVMIKFGVPDL 829
Query: 686 EAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGI 745
AM+LG EAA +S TF+ PIKLEFEKVY+PYLLISKKRYAGLYWT PEK+DKMDTKGI
Sbjct: 830 AKAMELGAEAAALVSKTFVDPIKLEFEKVYFPYLLISKKRYAGLYWTKPEKYDKMDTKGI 889
Query: 746 ETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTK 805
ETVRRDNC LV+ ++ CL K+L+DRD+ GA +Y K+ ISDLL N++D+S LVITK L K
Sbjct: 890 ETVRRDNCRLVQTVIDTCLRKMLIDRDVKGAEEYAKNIISDLLQNKVDMSQLVITKALAK 949
Query: 806 TGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 865
DY K AHVELAERMRKRDA +AP +GDRV YVI+KAAKGA AYERSEDPIYVL++N
Sbjct: 950 A--DYAAKQAHVELAERMRKRDAGSAPALGDRVAYVIVKAAKGAAAYERSEDPIYVLDHN 1007
Query: 866 IPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLS 925
IPIDT YYLENQ++KPLLRIFEPI+ + +L+G+HTR + ++T + +MKFA + +
Sbjct: 1008 IPIDTRYYLENQLAKPLLRIFEPIMGPKANTMLNGEHTRVVQVATSNVGALMKFAVKTVQ 1067
Query: 926 CIGCKALI--SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVL 983
C+GC+ + N +C +C+ R A+LY + +++ LEV F RLWT CQ CQGSL QDVL
Sbjct: 1068 CLGCRTPLREQNTPVCKNCRPRVAQLYHEKLARASALEVEFARLWTCCQRCQGSLAQDVL 1127
Query: 984 CTSRDCPIFYRRKKAQKDMAEAKLQLDRWN 1013
CT++DCPIF++RK+AQKD+ +A + R++
Sbjct: 1128 CTNKDCPIFFKRKRAQKDVEDAVNVVQRFD 1157
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 203/341 (59%), Gaps = 39/341 (11%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
A W RP L V ++ FQQ+DI+ + G IR++GVT +G+SV
Sbjct: 155 ALWPRPDLEPLDVDN-DAVTFQQIDIEE----------HQAVGQPPAIRMYGVTAQGNSV 203
Query: 133 CCKVHGFEPYFYISCPQGMGPD---DISHFHQILEGRMREANRNSKVPQFVRHIEMVQKR 189
C VHGF PYFYI P+G + D ++ +L G + V + ++V K+
Sbjct: 204 CAHVHGFLPYFYIHAPRGFTANTCNDFANHLNVLFG-----------ARTVHNAQVVSKK 252
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF-------MTYESNVL 242
S+M Y Q++ F+K+ ++ + RG +RG +G + +TYE N+
Sbjct: 253 SLMGYAGQENVAFIKLTISDLRSLPRIRGSFERG----EIGFRDLFTAGDVCLTYE-NIA 307
Query: 243 FALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
+ LRFMID IVG NWI + Y R ++ +S CQ+E DC ++S P+ E+SK+A
Sbjct: 308 YTLRFMIDLKIVGMNWIRINEANYKLRPESQKVSLCQIELDCSCDALVSHAPDAEWSKVA 367
Query: 301 PFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDV 360
P RILSFDIECAGRKG FPEP+ DPVIQ+AN+VT QGE PF++NV TL +C+ IVG V
Sbjct: 368 PLRILSFDIECAGRKGVFPEPSVDPVIQIANMVTRQGESTPFVKNVFTLNTCSHIVGSQV 427
Query: 361 MSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+SF E D+L AW F++EVDPDV+IGYNI FD PYL+++
Sbjct: 428 LSFNKEIDMLEAWTKFVQEVDPDVVIGYNIANFDFPYLLDR 468
>gi|242817379|ref|XP_002486944.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
stipitatus ATCC 10500]
gi|218713409|gb|EED12833.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1106
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/621 (63%), Positives = 500/621 (80%), Gaps = 11/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH+II++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 484 QKEDVHHTIITELFNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLINYAEMARVTGVPFN 543
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +K +SQ+ RKA+ + LVIPN+ + ++G YEGATV+E G+Y+ P+ATLD
Sbjct: 544 YLLSRGQQVKFISQIFRKARTEQLVIPNLSK--QDEGEYEGATVIEPVRGYYDVPVATLD 601
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ + NL E TP+G+ F + ++KG+L +ILE
Sbjct: 602 FASLYPSIIQAHNLCYTTLLNQKKVEHFNLKKDEDYIVTPNGDMFCTTKVRKGLLSQILE 661
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARKRAK +L KDP +KAVL+GRQLALK+SANSVYG TGATVG+LPC+EI+SS T
Sbjct: 662 ELLSARKRAKRELAVEKDPFKKAVLNGRQLALKVSANSVYGLTGATVGKLPCLEIASSTT 721
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK VE K+T GY H+A+VIYGDTDSVMV+FGV T+E AMKLG EAA+Y
Sbjct: 722 SYGRQMIEKTKAEVEAKYTIANGYSHDAQVIYGDTDSVMVKFGVRTLEEAMKLGEEAAEY 781
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWTN +K+DKMDTKGIETVRRDNC LV+
Sbjct: 782 VSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTNTKKYDKMDTKGIETVRRDNCRLVQT 841
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L+KIL+DRD+ GA +YVK+TISDLL N++D+S LVITK L+K+ DY K AHVE
Sbjct: 842 VIETVLNKILIDRDVNGAQEYVKNTISDLLQNKIDMSKLVITKALSKS--DYTAKQAHVE 899
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+NQ+
Sbjct: 900 LAERMRKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDNQL 959
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+ PL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK +
Sbjct: 960 ANPLGRIFEPILGEKKAAQLLTGEHTRSISVAAPTLGGLMKFAKKTQTCMGCKKPLVGKD 1019
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +C +C+ R ELY +T+ + +LEV FGRLWTQCQ CQGSLH +V+C++RDCPIF
Sbjct: 1020 EMAGAVCENCRPRLGELYARTLQKTSDLEVRFGRLWTQCQRCQGSLHCEVICSARDCPIF 1079
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A+ +L R++
Sbjct: 1080 YMRMKAKKDVEDAEKELMRFD 1100
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 209/360 (58%), Gaps = 29/360 (8%)
Query: 52 EDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP 111
ED E L E ++ A + +W RPPL + ++ FQQ+D++ G+SN
Sbjct: 68 EDLEKLTQDIHELKESNAEKDQQWDRPPLGD-FDPAKDNLCFQQIDVEE--GESN----- 119
Query: 112 LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN 171
G A+ ++FGVT +G+SV V GF Y YIS P G P+D+ + + LE +
Sbjct: 120 ---GRTAV-KLFGVTEKGNSVLLHVEGFRHYLYISAPVGFRPEDVQPYAKFLETKF---- 171
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQL---DG 228
+ + +++ QK ++ +Q +L+I V P ++ R L++ I + G
Sbjct: 172 --ASHEHMIHSVQLTQKENLYGFQGNLKSWYLRITVTEPKHISRLRNGLEKSISIYNYKG 229
Query: 229 LGMKS-----FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFD 281
L + MTY+ N+ + LRFMID I G +W+E G Y+ AK S CQ+E
Sbjct: 230 LWSSAGDDGGIMTYD-NIQYVLRFMIDTGISGMSWVEAKAGDYQLVPEAKRQSNCQIEAF 288
Query: 282 CLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQP 341
YS +I+ +GE++KMAP RILSFDIECAGRKG FPEP DPVIQ+AN+VT GE +P
Sbjct: 289 MHYSSLIAHSHDGEWAKMAPLRILSFDIECAGRKGIFPEPNQDPVIQIANVVTRYGESKP 348
Query: 342 FIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
F+RNV L +C+ IV + F+ E +L+AW+ F+++VDPDV+IGYNI FD PYL+++
Sbjct: 349 FVRNVFVLDTCSLIVNTQIFEFKDEAKMLMAWQQFLQKVDPDVIIGYNIANFDFPYLLDR 408
>gi|113931510|ref|NP_001039204.1| DNA-directed DNA polymerase delta 1 [Xenopus (Silurana) tropicalis]
gi|89268922|emb|CAJ83173.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Xenopus
(Silurana) tropicalis]
Length = 1109
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/607 (66%), Positives = 489/607 (80%), Gaps = 6/607 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RL++KLM + NY+EMARVTGVP+S
Sbjct: 490 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLMEKLMCVINYMEMARVTGVPLS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQLLR+A +++LV+P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 550 YLLSRGQQIKVVSQLLRQAMKQDLVMPVVKSEGGED--YTGATVIEPLKGYYDVPIATLD 607
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ K L PE KTP+G+ FVK++++KG+LPEILE
Sbjct: 608 FSSLYPSIMMAHNLCYTTLLQSGSIDKYGLSPEDFIKTPTGDCFVKASIRKGLLPEILEN 667
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARKRAKA+LK+ DP ++ VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 668 LLCARKRAKAELKKETDPFKQKVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 727
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ +A+VIYGDTDSVM + GV TV AM++GREAA+++
Sbjct: 728 FGRQMIEKTKQLVESKYTLDNGYKADAKVIYGDTDSVMCKLGVQTVVEAMEIGREAAEWV 787
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKN 758
S F PIKLEFEKVY+PYLLI+KKRYAGLY+ ++ DKMD KGIETVRRDNC LV N
Sbjct: 788 SSHFTPPIKLEFEKVYFPYLLINKKRYAGLYFSSSANTHDKMDCKGIETVRRDNCPLVAN 847
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL KIL+DRD GAV++ K ISDLL NR+D+S LVITK LT+T D+Y K AHVE
Sbjct: 848 LINTCLQKILIDRDPMGAVEHAKDVISDLLCNRIDISQLVITKELTRTADEYAGKQAHVE 907
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +APN+GDRVPYVII AAKG AY +SEDPIYVLENNIPIDT YYLE Q+
Sbjct: 908 LAERMRKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPIYVLENNIPIDTQYYLEQQL 967
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS-N 935
+KPLLRIFEPIL + E LL G+HTR ++ T G+M FAK++ +CIGCKA ++ +
Sbjct: 968 AKPLLRIFEPILGESKAESILLKGEHTRCKTVLTAKVGGLMAFAKKRSTCIGCKATLNHD 1027
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C++CK RE+EL K +SQ+ LE F RLWTQCQ CQGSLH+DVLCTSRDCPIFY R
Sbjct: 1028 GAVCNYCKQRESELIQKEISQLSGLEEKFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMR 1087
Query: 996 KKAQKDM 1002
KK QKD+
Sbjct: 1088 KKVQKDL 1094
Score = 317 bits (811), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 220/342 (64%), Gaps = 15/342 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW RPP+S + Q++ FQQ+++D+ +G +L + G IIR+FG+T EG+SVC
Sbjct: 74 KWLRPPVSLTDPKE-QTLCFQQVELDHYVGSHVSGMLGATQGPVPIIRMFGITEEGNSVC 132
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C +HGF PYFY+ C G +D+S F + L + + R++K + Q V +++ K ++
Sbjct: 133 CHIHGFAPYFYVPCHTGFKQEDLSDFKKELNSAVIKDMRSNKDSISQAVLAVDVCHKENM 192
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y +K PF+KI +ALP ++A + +L++G++ + YE+N+ F +RFM+D
Sbjct: 193 YGYHGKKIIPFMKITMALPRLIAPAKRLLEQGLRFGRHPTHCYQAYEANIDFEIRFMVDN 252
Query: 252 NIVGGNWIEVPVGKYR------------KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKM 299
+IVG NWIE+P GKYR + +S Q+E D ++D+IS EG++ K+
Sbjct: 253 DIVGCNWIELPAGKYRLRKESQDEGPSKENPSKVSLAQIEVDISWADLISHPAEGDWQKI 312
Query: 300 APFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVD 359
AP R+LSFDIECAGRKG FPEP DPVIQ+AN+V QGEK FIRNV TL +C+ IVG
Sbjct: 313 APLRVLSFDIECAGRKGVFPEPDKDPVIQIANMVLRQGEKDAFIRNVFTLGTCSSIVGSQ 372
Query: 360 VMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V+ F+ E +L AW DF+R +DPD++ GYNI FD+PYLI +
Sbjct: 373 VLCFDREDALLKAWADFVRTIDPDIITGYNIQNFDMPYLINR 414
>gi|262176855|gb|ACY27482.1| DNA polymerase delta [Xenopus laevis]
Length = 1108
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/607 (66%), Positives = 488/607 (80%), Gaps = 6/607 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL+KLM + NY+EMARVTGVP+S
Sbjct: 489 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLEKLMCVINYMEMARVTGVPLS 548
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQLLR+A +++LV+P V+ G E Y GATV+E G+Y+ PIATLD
Sbjct: 549 YLLSRGQQIKVVSQLLRQAMKQDLVMPVVRSEGGED--YTGATVIEPLKGYYDVPIATLD 606
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ K L PE KTP+G+ FVK++++KG+LPEILE
Sbjct: 607 FSSLYPSIMMAHNLCYTTLLQSGSVEKYGLNPEDFIKTPTGDCFVKASVRKGLLPEILEN 666
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARKRAK +LK+ DP ++ VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 667 LLCARKRAKTELKKETDPFKQKVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 726
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ +A+VIYGDTDSVM + GV TV AM+LGREAA+++
Sbjct: 727 FGRQMIEKTKQLVESKYTLDNGYKADAKVIYGDTDSVMCKLGVQTVAEAMELGREAAEWV 786
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKN 758
S F PIKLEFEKVY+PYLLI+KKRYAGLY+ ++ DKMD KGIETVRRDNC LV N
Sbjct: 787 SSHFTPPIKLEFEKVYFPYLLINKKRYAGLYFSSSANTHDKMDCKGIETVRRDNCPLVAN 846
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL KIL+DRD GAV++ K ISDLL NR+D+S LVITK LT+T D+Y K AHVE
Sbjct: 847 LINTCLQKILIDRDPMGAVEHAKDVISDLLCNRIDISQLVITKELTRTADEYAGKQAHVE 906
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +APN+GDRVPYVII AAKG AY +SEDPIYVLENNIPIDT YYLE Q+
Sbjct: 907 LAERMRKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPIYVLENNIPIDTQYYLEQQL 966
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS-N 935
+KPLLRIFEPIL + E LL G+HTR ++ T G+M FAK++ +CIGCKA ++ +
Sbjct: 967 AKPLLRIFEPILGESKAESILLKGEHTRCKTVLTAKVGGLMAFAKKRSTCIGCKATLNHD 1026
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C++CK RE+EL K +SQ+ LE F RLWTQCQ CQGSLH++VLCTSRDCPIFY R
Sbjct: 1027 GAVCNYCKQRESELLQKEISQLSALEEKFSRLWTQCQRCQGSLHEEVLCTSRDCPIFYMR 1086
Query: 996 KKAQKDM 1002
KK QKD+
Sbjct: 1087 KKVQKDL 1093
Score = 317 bits (811), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 153/342 (44%), Positives = 222/342 (64%), Gaps = 16/342 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW RPP+S + Q + FQQ+++D+ +G +L + G IIR+FG+T EG+SVC
Sbjct: 74 KWLRPPVSLTDPKE-QHLCFQQVELDHYVGSHVSGMLGATKGPVPIIRMFGITEEGNSVC 132
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C +HGF PYFY+ C G +D+S F + L + + R++K + Q V +++ K ++
Sbjct: 133 CHIHGFAPYFYVPCHTGFKQEDLSDFKKELNTAVIKDMRSNKDGISQAVLAVDVCHKENM 192
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y ++ PF+KI +ALP ++A + +L++G++ G + YE+N+ F +RFM+D
Sbjct: 193 YGYHGKRIMPFMKITMALPRLIAPAKRLLEQGLRF-GRQPTHYQAYEANIDFEIRFMVDN 251
Query: 252 NIVGGNWIEVPVGKYRKTAKT------------LSYCQLEFDCLYSDIISRHPEGEFSKM 299
+IVG NWIE+P GKYR ++ +S Q+E D ++D+IS EGE+ K+
Sbjct: 252 DIVGCNWIELPAGKYRVRKESQDEEPSKDNPSKVSLAQIEVDISWADLISHPAEGEWQKI 311
Query: 300 APFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVD 359
AP R+LSFDIECAGRKG FPEP DPVIQ+AN+V QGEK PFIRNV TL +CA IVG
Sbjct: 312 APQRVLSFDIECAGRKGVFPEPDKDPVIQIANMVLRQGEKDPFIRNVFTLGTCASIVGSQ 371
Query: 360 VMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V+ FE E +L AW +F+R +DPD++ GYNI FD+PYLI +
Sbjct: 372 VLCFEREDALLKAWAEFVRIIDPDIITGYNIQNFDMPYLINR 413
>gi|71005878|ref|XP_757605.1| hypothetical protein UM01458.1 [Ustilago maydis 521]
gi|46097098|gb|EAK82331.1| hypothetical protein UM01458.1 [Ustilago maydis 521]
Length = 1057
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/617 (63%), Positives = 491/617 (79%), Gaps = 6/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQN E+RRRLAVYCLKDAYLPQRL+DKLM NY+EMARVTGVP +
Sbjct: 441 QKEDVHHSLITELQNAGPESRRRLAVYCLKDAYLPQRLMDKLMCFINYIEMARVTGVPFN 500
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RKA + N ++P K G+E YEGATVLE +AG+Y++PIATLD
Sbjct: 501 YLLSRGQQIKVVSQLFRKANEDNYLVPAYKGEGTED-QYEGATVLEPKAGYYDRPIATLD 559
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPS+MMA+NLCY+TL+ + +L L E TP+ F L+KG+LP +LE
Sbjct: 560 FASLYPSVMMAHNLCYTTLLDKKTIDRLELKQDEDYVITPNNNYFATKKLRKGLLPTVLE 619
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LLAARKRAKADLK+ DP ++AVLDGRQLALKISANSVYGFTGAT+G+LPC+EIS S T
Sbjct: 620 NLLAARKRAKADLKKETDPFKRAVLDGRQLALKISANSVYGFTGATIGKLPCLEISMSTT 679
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK VE +T GYE++AEV+YGDTDSVM++FGVP + AM+LG EAA
Sbjct: 680 AYGRQMIEQTKTYVEKHYTIANGYEYDAEVVYGDTDSVMIKFGVPDLARAMELGAEAAGL 739
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S TF+ PIKLEFEKVY+PYLLISKKRYAGLYWT EK+DKMDTKGIETVRRDNC LV+
Sbjct: 740 VSKTFVDPIKLEFEKVYFPYLLISKKRYAGLYWTRAEKYDKMDTKGIETVRRDNCRLVQT 799
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DRD+ GA +Y K+ ISDLL N++D+S LVITK L K+ DY K AHVE
Sbjct: 800 VIETCLRKMLIDRDVKGAEEYAKNIISDLLQNKVDMSQLVITKALAKS--DYAAKQAHVE 857
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP++GDRV YVI+KAAKGA AYERSEDPIYVL++NIPIDT YYLENQ+
Sbjct: 858 LAERMRKRDAGSAPSLGDRVAYVIVKAAKGAAAYERSEDPIYVLDHNIPIDTRYYLENQL 917
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--SNG 936
+KPLLRIFEPI+ + +L+G+HTR + ++T + +MKFA + + C+GC+ + N
Sbjct: 918 AKPLLRIFEPIMGPKANTMLNGEHTRVVQVATSNVGALMKFAVKTVQCLGCRTPLKDQNA 977
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
+C +C+ R A+LY + +++ LEV F RLWT CQ CQGSL QDVLCT++DCPIF++RK
Sbjct: 978 PVCRNCRPRVAQLYHEKLARASALEVEFARLWTCCQRCQGSLAQDVLCTNKDCPIFFKRK 1037
Query: 997 KAQKDMAEAKLQLDRWN 1013
+AQKD+ +A + R++
Sbjct: 1038 RAQKDVEDAVHVVQRFD 1054
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 203/341 (59%), Gaps = 39/341 (11%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
A W RP L + + FQQ+DI+ +++ G IR++GVT++GHSV
Sbjct: 52 ALWPRPYLEPLDIDN-DDVTFQQIDIE------EHQIV----GQPPSIRMYGVTQQGHSV 100
Query: 133 CCKVHGFEPYFYISCPQGMGPD---DISHFHQILEGRMREANRNSKVPQFVRHIEMVQKR 189
C +HGF PYFYI P+G + D ++ +L G + V E+V K+
Sbjct: 101 CAHIHGFLPYFYIHAPRGFTANTCHDFTNHLNVLFG-----------ARTVHKSELVSKK 149
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF-------MTYESNVL 242
S+M Y Q++ F+K+ ++ V RG +RG +G + +TYE N+
Sbjct: 150 SLMGYAGQENVAFIKLTISDLRSVPKIRGSFERG----EIGFRDLFTPGDVSLTYE-NIA 204
Query: 243 FALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
+ LRFMID IVG NW+ V YR ++ +S CQ+E DC I S P+ E+SK+A
Sbjct: 205 YTLRFMIDLKIVGMNWVRVQPANYRLRPESQKVSLCQIELDCSCDAIASHAPDDEWSKIA 264
Query: 301 PFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDV 360
P RILSFDIECAGRKG FPEP+ DPVIQ+AN+VT QGE PF++NV TL +C+ IVG V
Sbjct: 265 PLRILSFDIECAGRKGIFPEPSVDPVIQIANMVTRQGEPTPFVKNVFTLNTCSHIVGSQV 324
Query: 361 MSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+SF E D+L AW F++EVDPDV+IGYNI FD PYL+++
Sbjct: 325 LSFNKEVDMLEAWTKFVQEVDPDVVIGYNIANFDFPYLLDR 365
>gi|147899700|ref|NP_001087694.1| DNA-directed DNA polymerase delta 1 [Xenopus laevis]
gi|51895814|gb|AAH81093.1| Pold protein [Xenopus laevis]
Length = 1109
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/607 (66%), Positives = 488/607 (80%), Gaps = 6/607 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL+KLM + NY+EMARVTGVP+S
Sbjct: 490 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLEKLMCVINYMEMARVTGVPLS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQLLR+A +++LV+P V+ G E Y GATV+E G+Y+ PIATLD
Sbjct: 550 YLLSRGQQIKVVSQLLRQAMKQDLVMPVVRSEGGED--YTGATVIEPLKGYYDVPIATLD 607
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ K L PE KTP+G+ FVK++++KG+LPEILE
Sbjct: 608 FSSLYPSIMMAHNLCYTTLLQSGSVEKYGLNPEDFIKTPTGDCFVKASVRKGLLPEILEN 667
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARKRAK +LK+ DP ++ VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 668 LLCARKRAKTELKKETDPFKQKVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 727
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ +A+VIYGDTDSVM + GV TV AM+LGREAA+++
Sbjct: 728 FGRQMIEKTKQLVESKYTLDNGYKADAKVIYGDTDSVMCKLGVQTVAEAMELGREAAEWV 787
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKN 758
S F PIKLEFEKVY+PYLLI+KKRYAGLY+ ++ DKMD KGIETVRRDNC LV N
Sbjct: 788 SSHFTPPIKLEFEKVYFPYLLINKKRYAGLYFSSSANTHDKMDCKGIETVRRDNCPLVAN 847
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL KIL+DRD GAV++ K ISDLL NR+D+S LVITK LT+T D+Y K AHVE
Sbjct: 848 LINTCLQKILIDRDPMGAVEHAKDVISDLLCNRIDISQLVITKELTRTADEYAGKQAHVE 907
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +APN+GDRVPYVII AAKG AY +SEDPIYVLENNIPIDT YYLE Q+
Sbjct: 908 LAERMRKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPIYVLENNIPIDTQYYLEQQL 967
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS-N 935
+KPLLRIFEPIL + E LL G+HTR ++ T G+M FAK++ +CIGCKA ++ +
Sbjct: 968 AKPLLRIFEPILGESKAESILLKGEHTRCKTVLTAKVGGLMAFAKKRSTCIGCKATLNHD 1027
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C++CK RE+EL K +SQ+ LE F RLWTQCQ CQGSLH++VLCTSRDCPIFY R
Sbjct: 1028 GAVCNYCKQRESELLQKEISQLSALEEKFSRLWTQCQRCQGSLHEEVLCTSRDCPIFYMR 1087
Query: 996 KKAQKDM 1002
KK QKD+
Sbjct: 1088 KKVQKDL 1094
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 152/342 (44%), Positives = 222/342 (64%), Gaps = 15/342 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW RPP+S + Q + FQQ+++D+ +G +L + G IIR+FG+T EG+SVC
Sbjct: 74 KWLRPPVSLTDPKE-QHLCFQQVELDHYVGSHVSGMLGATKGPVPIIRMFGITEEGNSVC 132
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C +HGF PYFY+ C G +D+S F + L + + R++K + Q V +++ K ++
Sbjct: 133 CHIHGFAPYFYVPCHTGFKQEDLSDFKKELNTAVIKDMRSNKDGISQAVLAVDVCHKENM 192
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y ++ PF+KI +ALP ++A + +L++G++ + + YE+N+ F +RFM+D
Sbjct: 193 YGYHGKRIMPFMKITMALPRLIAPAKRLLEQGLRFGRHPIHCYQAYEANIDFEIRFMVDN 252
Query: 252 NIVGGNWIEVPVGKYRKTAKT------------LSYCQLEFDCLYSDIISRHPEGEFSKM 299
+IVG NWIE+P GKYR ++ +S Q+E D ++D+IS EGE+ K+
Sbjct: 253 DIVGCNWIELPAGKYRVRKESQDEEPSKDNPSKVSLAQIEVDISWADLISHPAEGEWQKI 312
Query: 300 APFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVD 359
AP R+LSFDIECAGRKG FPEP DPVIQ+AN+V QGEK PFIRNV TL +CA IVG
Sbjct: 313 APQRVLSFDIECAGRKGVFPEPDKDPVIQIANMVLRQGEKDPFIRNVFTLGTCASIVGSQ 372
Query: 360 VMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V+ FE E +L AW +F+R +DPD++ GYNI FD+PYLI +
Sbjct: 373 VLCFEREDALLKAWAEFVRIIDPDIITGYNIQNFDMPYLINR 414
>gi|212530840|ref|XP_002145577.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
marneffei ATCC 18224]
gi|210074975|gb|EEA29062.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
marneffei ATCC 18224]
Length = 1105
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/621 (63%), Positives = 495/621 (79%), Gaps = 11/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH+II++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 483 QKEDVHHTIITELFNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +K +SQ+ RKA+ + LVIPN+ + + G YEGATV+E G+Y+ P+ATLD
Sbjct: 543 YLLSRGQQVKFISQIFRKARTEQLVIPNLSK--QDDGDYEGATVIEPIRGYYDVPVATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ NL E TP+G+ F + ++KG+L +ILE
Sbjct: 601 FASLYPSIIQAHNLCYTTLLNKHKVEHFNLKKDEDYIVTPNGDMFCTTKVRKGLLSQILE 660
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARKRAK +L KDP +KAVL+GRQLALK+SANSVYG TGATVG+LPC+EI+SS T
Sbjct: 661 ELLGARKRAKKELAVEKDPFKKAVLNGRQLALKVSANSVYGLTGATVGKLPCLEIASSTT 720
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK VE K+T GY H+A+VIYGDTDSVMV+FGV T+E AMKLG EAADY
Sbjct: 721 SYGRQMIEKTKAEVEAKYTIANGYSHDAQVIYGDTDSVMVKFGVRTLEEAMKLGEEAADY 780
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWTN +K+DKMDTKGIETVRRDNC LV+
Sbjct: 781 VSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTNTKKYDKMDTKGIETVRRDNCRLVQT 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L+KIL+DRDI GA YVK+ ISDLL N++DLS LVITK L+K+ DY K AHVE
Sbjct: 841 VIETVLNKILIDRDINGAQDYVKNMISDLLQNKVDLSKLVITKALSKS--DYTAKQAHVE 898
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+NQ+
Sbjct: 899 LAERMRKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDNQL 958
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+ PL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK +
Sbjct: 959 ANPLGRIFEPILGEKKAAQLLTGEHTRSISVAAPTLGGLMKFAKKTQTCMGCKKPLVGKD 1018
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +C +C+ R ELY +T+ + +LEV FGRLWTQCQ CQGSLH +V+C++RDCPIF
Sbjct: 1019 EMAGAVCENCRPRLGELYARTLKKTSDLEVRFGRLWTQCQRCQGSLHCEVICSARDCPIF 1078
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A+ +L R++
Sbjct: 1079 YMRMKAKKDVEDAEKELMRFD 1099
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 28/359 (7%)
Query: 52 EDEESLILRDIEQ-RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL 110
ED E L +DI ++ A + +W RPPL ++ ++ FQQ+D++ G+SN
Sbjct: 68 EDLEKLT-QDINGLKESNAEKDQQWDRPPLGDFDYTK-DNLCFQQIDVEE--GESN---- 119
Query: 111 PLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA 170
G A+ ++FGVT +G+SV V GF Y YI+ P G P+D+ + LE R
Sbjct: 120 ----GRTAV-KLFGVTEKGNSVLLHVEGFRHYLYIAAPVGFHPEDVKPYTSFLEQRFGMH 174
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGI---QLD 227
R + + + QK ++ +Q ++KI V P ++ R L++ I
Sbjct: 175 ER------MIHSVNLAQKENLYGFQGNLKSWYIKITVTDPKHISRLRNGLEKSIANYNYK 228
Query: 228 GL---GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDC 282
GL G + N+ + LRFMID I G +W+E G Y AK S CQ+E
Sbjct: 229 GLWPSGDDGGVVTFDNIQYVLRFMIDTGISGMSWVEAKAGDYELVPEAKRQSNCQIEAFM 288
Query: 283 LYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPF 342
Y+ +++ +GE++KMAP RILSFDIECAGRKG FPEP DPVIQ+AN+VT GE +PF
Sbjct: 289 PYTSLVAHSHDGEWAKMAPLRILSFDIECAGRKGIFPEPNQDPVIQIANVVTRYGESKPF 348
Query: 343 IRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+RNV L +C+ IV + F+ E +L AW+ F+++VDPDV+IGYNI FD PYL+++
Sbjct: 349 VRNVFVLDTCSLIVNTQIFEFKDEAKMLAAWQQFVQKVDPDVIIGYNIANFDFPYLLDR 407
>gi|255956273|ref|XP_002568889.1| Pc21g18980 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590600|emb|CAP96795.1| Pc21g18980 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1112
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/622 (63%), Positives = 497/622 (79%), Gaps = 9/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 480 QKEDVHHTMITELFNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA+++ LVIPN K ++ YEGATV+E + G+Y P+ATLD
Sbjct: 540 FLLSRGQQVKFISQLFRKAREQQLVIPNSKP--QDEQDYEGATVIEPKRGYYGVPVATLD 597
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KLNL E TP+G+ F + ++KG+L +ILE
Sbjct: 598 FASLYPSIIQAHNLCYTTLLNKSSVEKLNLKKDEDYIVTPNGDMFCTTKVRKGLLSQILE 657
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARKRAK +L D +KAVL+GRQLALK+SANSVYG TGATVG+LPC+ I+SS T
Sbjct: 658 ELLSARKRAKKELATETDSFKKAVLNGRQLALKVSANSVYGLTGATVGKLPCLPIASSTT 717
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++T GY H+AEVIYGDTDSVMV+FGV + AMKLG EAAD+
Sbjct: 718 SYGRQMIEKTKQEVEARYTIANGYSHDAEVIYGDTDSVMVKFGVTELADAMKLGEEAADF 777
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWTNP K DKMDTKGIETVRRDNCL+V+N
Sbjct: 778 VSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTNPNKHDKMDTKGIETVRRDNCLMVQN 837
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L+KIL+DRDI GA YVK+TISDLL N++D+S LVITK L+K +DY K AHVE
Sbjct: 838 VIETVLNKILIDRDIDGAQDYVKATISDLLQNKIDMSKLVITKALSKRKEDYAGKQAHVE 897
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM KRDA +AP +GDRV YV+IK + +K YER+EDPI+VLENNIPIDT YYL+NQ+
Sbjct: 898 LAERMHKRDAGSAPTLGDRVAYVMIKGSTDSKGYERAEDPIFVLENNIPIDTKYYLDNQL 957
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+ PL RIFEPIL + + +LL+G+HTRSI+ + + G+MKFAK+ +C+GCK +S+
Sbjct: 958 TNPLNRIFEPILGEKKAGQLLTGEHTRSITKAASNLGGLMKFAKKTQTCMGCKKPLSSKD 1017
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +CS+C+ R ELY KT+++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1018 EMEGAVCSNCRPRLGELYTKTLTKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIF 1077
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +++ L R++F
Sbjct: 1078 YMRMKAKKDVEDSQKDLSRFDF 1099
Score = 262 bits (670), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 138/344 (40%), Positives = 197/344 (57%), Gaps = 26/344 (7%)
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
+++ + + +W RPPL + ++I FQQ+D E L A IR+FG
Sbjct: 80 KENNSEKDQQWERPPLGD-FDPAKENICFQQIDA---------EEATLMGKPA--IRLFG 127
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT G S C V GFE Y YI+ P D + LE ++ ++ + ++
Sbjct: 128 VTEAGQSACLHVTGFEHYLYIAAPVSFTKADCDPYKHFLEQKLGQSFTA------ISSVQ 181
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG---IQLDGL--GMKSFMTYES 239
+ + +I +Q + ++KI V P M A R L+ G + G+ G +T++
Sbjct: 182 LTMRENIYGFQGNQKSYYIKITVTEPKMAARLRSALETGSGSMNYKGMWSGADGILTFD- 240
Query: 240 NVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFS 297
N+ + LRFMID + G W+E GKYR ++ LS CQ+E Y D+I+ P GE++
Sbjct: 241 NIQYLLRFMIDTGLAGMAWVEAIAGKYRLLGQSQRLSNCQIEASVDYRDMIAHPPNGEWA 300
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
KMAP R+LSFDIECAGRKG FPEP DPVIQ+AN+VT GE +PFIRNV L +C+ IV
Sbjct: 301 KMAPLRVLSFDIECAGRKGIFPEPNMDPVIQIANVVTRYGETKPFIRNVFVLDTCSLIVN 360
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++ FE E +L AWRDF+ +VDPDV+IGYNI FD PYL+++
Sbjct: 361 TQILEFEKEEKMLDAWRDFVEKVDPDVIIGYNIANFDFPYLLDR 404
>gi|388580039|gb|EIM20357.1| putative delta DNA polymerase [Wallemia sebi CBS 633.66]
Length = 1060
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/617 (63%), Positives = 493/617 (79%), Gaps = 6/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++LQNG E+RRRLAVYCLKDAYLPQRLLD+LM + N EMARVTGVP +
Sbjct: 442 QKEDVHHSIITELQNGTPESRRRLAVYCLKDAYLPQRLLDRLMSLVNQTEMARVTGVPFN 501
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL++GQSIKV+SQ+ R+A+ ++P ++ GS++ YEGATV+E R G+Y+ PI TLD
Sbjct: 502 YLLAKGQSIKVMSQICRQAQVHGYLVPALRVEGSDE-QYEGATVIEPRRGYYDVPITTLD 560
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ P+ +L L E KTP+ + FV +KG+LP +L+
Sbjct: 561 FSSLYPSIMMAHNLCYTTLLDPQTVERLKLKEGEDYIKTPNNDMFVTPVKRKGLLPVVLQ 620
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L++ARKRA+AD+K KDP +AVLDGRQLALK+SANSVYGFTGAT+G+LPC+ ISSS T
Sbjct: 621 DLISARKRARADIKSEKDPFRRAVLDGRQLALKVSANSVYGFTGATIGKLPCLPISSSTT 680
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR+MIE TK+ VE + Y H+AEV+YGDTDSVM++FG +E AMKLG EAA
Sbjct: 681 AYGRRMIERTKEEVESHYKVSNNYSHDAEVVYGDTDSVMIKFGCRDLETAMKLGAEAAGV 740
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
IS F PIKLEFEKVYYPYLLI+KKRYAGLYWT EK+DKMDTKGIETVRRDNC LV
Sbjct: 741 ISSKFPNPIKLEFEKVYYPYLLINKKRYAGLYWTGLEKYDKMDTKGIETVRRDNCRLVGT 800
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++T CLHK+L+DRD+ A Y K IS+LL N++D+S LVITK LTKT +Y+ K AHV
Sbjct: 801 VITTCLHKMLIDRDVKAAEDYTKHVISELLQNKIDMSQLVITKALTKT--EYDAKQAHVC 858
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVI+K +KGA AYERSEDP++VLENN+PIDT YYLENQ+
Sbjct: 859 LAERMRKRDAGSAPALGDRVAYVIVKGSKGAAAYERSEDPLFVLENNVPIDTKYYLENQL 918
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--SNG 936
SKPLLRIFEPIL S+ LL+GDHTR+I+++TPS G+MKFA + ++C+GCKA I S+
Sbjct: 919 SKPLLRIFEPILGEKSQSLLTGDHTRTITVATPSIGGLMKFAVKTVTCLGCKAPIRGSDA 978
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
+C +CKG+ ELY K V+ V L+V F RLWTQCQ CQGSLHQDV+CT++DC IFY R+
Sbjct: 979 AVCKNCKGKAGELYQKQVASVSALQVQFARLWTQCQRCQGSLHQDVICTNKDCNIFYMRQ 1038
Query: 997 KAQKDMAEAKLQLDRWN 1013
+++ ++A A L+R+N
Sbjct: 1039 RSKFEVASAVNTLERFN 1055
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/330 (46%), Positives = 198/330 (60%), Gaps = 19/330 (5%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W RP + + S + I+FQQ+D++ +P G+ IR+ GVT++G+SV
Sbjct: 53 WGRPSVPK-FESMVEPIIFQQIDLE-------EASIP---GAEPFIRMHGVTQDGYSVMA 101
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V GF PY YI+ P+G ++ F L N K + V +EM KRS+ Y
Sbjct: 102 NVTGFLPYLYIAAPRGFTKEECEGFSGYLNATF---GNNGK--RIVADMEMHTKRSLWGY 156
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNI 253
+ + PF+KI + RG +RG I + TYESN+ + LRFMID +
Sbjct: 157 KGDEKSPFIKITFVDQRSMTRVRGCFERGEIHFREFFDDAIQTYESNISYDLRFMIDKKV 216
Query: 254 VGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC 311
VG +WIE P G Y A T +S QLEFD + DII+ EGE+ KMAP RILSFDIEC
Sbjct: 217 VGMSWIECPGGAYNLKASTSKVSKAQLEFDIHHKDIIAHPAEGEWQKMAPLRILSFDIEC 276
Query: 312 AGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLL 371
AGR+G FPE DPVIQ+AN+VT QGE +PFIRNV TLKSCA I G V+SFE E +L
Sbjct: 277 AGRQGIFPEAQIDPVIQIANMVTRQGESKPFIRNVFTLKSCAHIAGSQVLSFEDESKMLN 336
Query: 372 AWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
AWRDF+ E DPDV+IGYN FD+PYL+++
Sbjct: 337 AWRDFVEEADPDVVIGYNTSNFDIPYLMDR 366
>gi|388852680|emb|CCF53598.1| probable DNA polymerase delta catalytic subunit [Ustilago hordei]
Length = 1057
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/617 (63%), Positives = 488/617 (79%), Gaps = 6/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQN E+RRRLAVYCLKDAYLPQRL+DKLM NY+EMARVTGVP +
Sbjct: 441 QKEDVHHSLITELQNAGPESRRRLAVYCLKDAYLPQRLMDKLMCFVNYIEMARVTGVPFN 500
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RKA + ++P K G+E YEGATVLE +AG+Y++PIATLD
Sbjct: 501 YLLSRGQQIKVVSQLFRKANEDKYLVPAYKGEGTED-QYEGATVLEPKAGYYDRPIATLD 559
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPS+MMA+NLCY+TL+ + +L L + TP+ F L+KG+LP +LE
Sbjct: 560 FASLYPSVMMAHNLCYTTLLDKKTIDRLELKENDDFVITPNNNYFATKKLRKGLLPTVLE 619
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LLAARKRAKADLK+ DP +AVLDGRQLALKISANSVYGFTGAT+G+LPC+EIS S T
Sbjct: 620 NLLAARKRAKADLKKETDPFRRAVLDGRQLALKISANSVYGFTGATIGKLPCLEISMSTT 679
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK VE +T GYEH+AEV+YGDTDSVM++FG P + AMKLG EAA
Sbjct: 680 AYGRQMIEQTKTYVEKHYTIANGYEHDAEVVYGDTDSVMIKFGPPDLAKAMKLGAEAAGL 739
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S TFI PIKLEFEKVY+PYLLISKKRYAGLYWT PEK+DKMDTKGIETVRRDNC LV+
Sbjct: 740 VSKTFIDPIKLEFEKVYFPYLLISKKRYAGLYWTRPEKYDKMDTKGIETVRRDNCRLVQT 799
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DRD+ GA +Y K+ ISDLL N++D+S LVITK L K+ DY K AHVE
Sbjct: 800 VIDTCLRKMLIDRDVKGAEEYAKNIISDLLQNKVDMSQLVITKALAKS--DYAAKQAHVE 857
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVI+KAAKGA AYERSEDPIYVL++NIPIDT YYLENQ+
Sbjct: 858 LAERMRKRDAGSAPALGDRVAYVIVKAAKGAAAYERSEDPIYVLDHNIPIDTRYYLENQL 917
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--SNG 936
+KPLLRIFEPI+ + +L+G+HTR + ++T + +MKFA + + C+GC+ + N
Sbjct: 918 AKPLLRIFEPIMGPKANTMLNGEHTRVVQVATSNVGALMKFAVKTVQCLGCRTPLRDQNI 977
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
+C +C+ R A+LY + +++ LEV F RLWT CQ CQGSL QDVLCT++DCPIF++RK
Sbjct: 978 PVCKNCRPRVAQLYHEKLARASALEVEFARLWTCCQRCQGSLAQDVLCTNKDCPIFFKRK 1037
Query: 997 KAQKDMAEAKLQLDRWN 1013
+AQKD+ +A + R++
Sbjct: 1038 RAQKDVEDAVQVVQRFD 1054
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/343 (43%), Positives = 202/343 (58%), Gaps = 43/343 (12%)
Query: 73 AKWARP---PLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREG 129
A W RP PL Y ++ FQQ+DI+ + G IR++GVT EG
Sbjct: 52 ALWPRPYLEPLDVDY----DAVTFQQIDIEE----------HQAVGQPPAIRMYGVTVEG 97
Query: 130 HSVCCKVHGFEPYFYISCPQGMGPDDISHF--HQILEGRMREANRNSKVPQFVRHIEMVQ 187
HSVC ++GF PYFYI P+G + + F H L R NR+ E+V
Sbjct: 98 HSVCAHIYGFLPYFYIHAPRGFTANTCNDFTNHLNLLFGSRAVNRS----------EIVS 147
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF-------MTYESN 240
K+S+M Y ++ F+K+ ++ V+ RG +RG +G + +TYE N
Sbjct: 148 KKSLMGYAGHENVAFIKLTISDLRGVSKIRGAFERG----EVGFRDLFTPGDACLTYE-N 202
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
+ + LRFMID IVG NWI V Y R ++ +S CQ+E DC I+S P+ E+SK
Sbjct: 203 IAYTLRFMIDLKIVGMNWIRVKAANYKLRPDSQKVSLCQIELDCSCDAILSHAPDDEWSK 262
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGV 358
+AP RILSFDIECAGRKG FPE + DPVIQ+AN+VT QGE PF++NV TL +C+ IVG
Sbjct: 263 LAPLRILSFDIECAGRKGVFPEASMDPVIQIANMVTRQGESSPFVKNVFTLNTCSHIVGS 322
Query: 359 DVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V+SF E D+L AW F++EVDPDV+IGYNI FD PYL+++
Sbjct: 323 QVLSFNKEIDMLEAWTKFVQEVDPDVIIGYNIANFDFPYLLDR 365
>gi|393240523|gb|EJD48049.1| hypothetical protein AURDEDRAFT_102277 [Auricularia delicata
TFB-10046 SS5]
Length = 1067
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/620 (62%), Positives = 489/620 (78%), Gaps = 9/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KE+VHHS I++LQNG AE+RRRLA+YCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 448 QKEEVHHSAITELQNGTAESRRRLAIYCLKDAYLPQRLMDKLMCFVNYTEMARVTGVPFN 507
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ IKV+SQL+RKAK+ +IP +K GS+ YEGATV++ + G+Y++PIATLD
Sbjct: 508 FLLARGQQIKVISQLMRKAKEDGYLIPAMKGEGSDD-QYEGATVIDPKTGYYKEPIATLD 566
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+S+YPSIMM +N+CY+T+ + +L L + +TP FVK +KG+LP ILE
Sbjct: 567 FSSMYPSIMMGHNICYTTMTDKQTIDRLGLVKDVDYTQTPQNTFFVKPGRRKGLLPTILE 626
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL+ARKRAKADLK DP ++AVLDGRQLALKISANSVYGF GA+ G LPC +ISS+ T
Sbjct: 627 NLLSARKRAKADLKNETDPFKRAVLDGRQLALKISANSVYGFPGASTGHLPCTDISSTTT 686
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK +VED + V G+EH+A+V+YGDTDSVMV+FG + M+LG EAAD
Sbjct: 687 AYGRQMIEKTKSVVEDHYRIVNGFEHDAQVVYGDTDSVMVKFGPSDLATCMRLGAEAADL 746
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ F+KP+KLEFEKVY+PYLLI+KKRYAGLYWT +K+DK+D KGIE+VRRDNC LV
Sbjct: 747 VTTHFVKPVKLEFEKVYWPYLLINKKRYAGLYWTKTDKYDKLDAKGIESVRRDNCRLVST 806
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
+ LHK+L+D+D GAV YVK ISDLL N++D+S LVITK L K DY K AHVE
Sbjct: 807 TIDTVLHKMLIDQDPDGAVTYVKKVISDLLQNKIDMSQLVITKALAKA--DYAGKQAHVE 864
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RMR+RDA +APNVGDRV YVIIKA A AYE+SEDPIYVLENNIP+DTHYYL+NQ+
Sbjct: 865 LAQRMRQRDAGSAPNVGDRVAYVIIKARTNAAAYEKSEDPIYVLENNIPLDTHYYLDNQL 924
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS---- 934
+KPL+RIFEP+L + +K L+SGDHTR+I+ISTP+ G+MK+A + ++C+GCK ++
Sbjct: 925 AKPLMRIFEPVLGSKAKSLISGDHTRTITISTPTAGGLMKYAVKTVTCLGCKTGLTTKNT 984
Query: 935 -NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
NG +C +C + +LY K V+ +L+V F RLWTQCQ CQGSLHQDVLCT++DCPIFY
Sbjct: 985 QNGAVCKNCAKKMPDLYQKHVAATSKLQVAFSRLWTQCQRCQGSLHQDVLCTNKDCPIFY 1044
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
RRKKAQKD+ ++ L R++
Sbjct: 1045 RRKKAQKDVEDSVALLSRFD 1064
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/334 (47%), Positives = 211/334 (63%), Gaps = 31/334 (9%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
++WARPPL + ++FQQ+DIDY AA I +FGVTREGHSV
Sbjct: 65 SEWARPPLVLN--EKTDDVVFQQIDIDY-------------GEEAAAINMFGVTREGHSV 109
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIM 192
+ F PYFY+ P+G + + F +A+ N+KV + I +V KRS+
Sbjct: 110 LAHITDFLPYFYLPVPRGFLDEHLLPF---------QADLNNKVGNVI-SINIVSKRSLW 159
Query: 193 YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM---KSFMTYESNVLFALRFMI 249
Y+ + PF KI V+ P V RG+ +RG + + G+ + +T+ESNV++ LRFMI
Sbjct: 160 AYRGDDNSPFFKITVSHPRFVPRVRGVFERG-EYNYQGLFPGGNMVTFESNVVYTLRFMI 218
Query: 250 DCNIVGGNWIEVPVGKYR-KTAKT-LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
D +VG NW+ VP GKY+ +T++T S CQ+E D + IS PEGE+S AP RILSF
Sbjct: 219 DTQLVGMNWVTVPAGKYKLRTSETKRSRCQIELDVKWDQFISHAPEGEWSTTAPLRILSF 278
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIECAGRKG FPE DPVIQ+A++VT QGE +PFIRN+ TL SCA IVG DV SF+ E
Sbjct: 279 DIECAGRKGIFPEANVDPVIQIASMVTRQGEDRPFIRNIFTLNSCAHIVGSDVRSFDNEA 338
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
D+L AW+ F+ VDPDV+ GYNI FDLPYL+++
Sbjct: 339 DLLSAWQKFVVTVDPDVITGYNIANFDLPYLLDR 372
>gi|321470374|gb|EFX81350.1| hypothetical protein DAPPUDRAFT_317527 [Daphnia pulex]
Length = 1139
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/615 (65%), Positives = 486/615 (79%), Gaps = 6/615 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++LQ GN +TRRRLAVYCLKDA+LP RLLDKLM + NY+EMARVTGVP+S
Sbjct: 526 QKEDVHHSIITELQEGNPQTRRRLAVYCLKDAHLPLRLLDKLMCLTNYMEMARVTGVPLS 585
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQLLRKAK++ L++P K E+ +EGATV+E G+Y +PIATLD
Sbjct: 586 YLLTRGQQIKVVSQLLRKAKEQGLLMPVHKAEAGEE--FEGATVIEPIRGYYSQPIATLD 643
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY++L+ P D KL + KTP+G FVK++++KG+LPEILE
Sbjct: 644 FSSLYPSIMMAHNLCYTSLLNPRDKDKLK--EDQYIKTPAGNYFVKASVRKGLLPEILEA 701
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AK DL DPL K VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 702 LLAARKKAKKDLAVETDPLRKKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTA 761
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MIE T VE KF GY H+A+VIYGDTDSVMV+FGV TV AM LGREAA+++
Sbjct: 762 FGRMMIEKTSTEVEAKFRVENGYAHDAKVIYGDTDSVMVKFGVSTVAEAMVLGREAAEFV 821
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FIKPI LEFEKVY+PYLLI+KKRYAGLYWT PE+FDKMD KGIETVRRDNC LV NL
Sbjct: 822 SAKFIKPINLEFEKVYFPYLLINKKRYAGLYWTKPEQFDKMDCKGIETVRRDNCQLVANL 881
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL KIL+DRD GA++Y K TISDLL N++D+SLLVITK LTKT DY K AHVEL
Sbjct: 882 INTCLQKILMDRDPDGALEYAKQTISDLLCNKVDISLLVITKELTKTDKDYANKQAHVEL 941
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +MRKRDA TAP +GDRVPYVI+ AAK AY ++EDPIYVLEN+IPID YYLENQ+S
Sbjct: 942 AHKMRKRDAGTAPKLGDRVPYVIVAAAKNTPAYLKAEDPIYVLENSIPIDAQYYLENQLS 1001
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT- 937
KPL+RIFEPIL A LL GDHTR+ S+ T G+ KF R+ +CIGCK ++ N +
Sbjct: 1002 KPLVRIFEPILGSKAESSLLHGDHTRTRSVITSKVGGLAKFTSRKSTCIGCKTVLPNDSA 1061
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
+C CK +E+E Y + + Q+ LE F RLWT+CQ CQGSL+++VLC++RDCPIFY RKK
Sbjct: 1062 VCKFCKPKESEFYQREIGQLYALEEKFNRLWTECQRCQGSLNEEVLCSNRDCPIFYMRKK 1121
Query: 998 AQKDMAEAKLQLDRW 1012
QKD+ E + + R+
Sbjct: 1122 VQKDLCEQEKLMKRF 1136
Score = 342 bits (877), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 168/376 (44%), Positives = 246/376 (65%), Gaps = 13/376 (3%)
Query: 32 PVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQS- 90
P+ ++EF +E DE + + ES L I Q + AKWARP S+ +S+ +
Sbjct: 82 PIYNEEFGEEP---DEAFMFAEMESDEL--IGQGPEVKQTTAKWARP--SAPELSEEKDR 134
Query: 91 IMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQG 150
++FQQLDIDY + + + SG+ A +RIFGVTR+ +S+CC VHGF PY Y++ P
Sbjct: 135 LVFQQLDIDYYTDKAMKGMPGAQSGTVATMRIFGVTRQQNSICCHVHGFAPYLYVTVPTN 194
Query: 151 MGPDDISHFHQILEGRMREANRNSK-VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVAL 209
P+ F + L + +R+ + + +FV +E +++ S+ Y + K PFLKI +AL
Sbjct: 195 FMPEQCRQFQEALNKALIADSRSKQEIHEFVLAVEFMERESMYGYHENKKCPFLKITLAL 254
Query: 210 PTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR-- 267
P +A+ + +L+RG +++ YESN+ F +R+M+D +IVG NWIE+P G +R
Sbjct: 255 PPFIAAAKRLLERGEIAAPFNSMAYVAYESNIDFEIRYMVDADIVGCNWIELPPGSWRLR 314
Query: 268 --KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP 325
T K ++ CQ+E D ++ +IS PEGE++ +APFRILSFDIECAGRKG FPE D
Sbjct: 315 PHSTVKPMTRCQIEVDVAWNKVISHAPEGEWADVAPFRILSFDIECAGRKGIFPEADKDR 374
Query: 326 VIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVM 385
VIQ+AN+V+L GE +PFIRN+MTL +CAPI+G VMS++ E ++L W DF+REVDPD++
Sbjct: 375 VIQIANMVSLYGETEPFIRNIMTLDTCAPIIGSQVMSYKLEDELLDKWADFVREVDPDII 434
Query: 386 IGYNICKFDLPYLIEK 401
GYNIC FDLPYL+ +
Sbjct: 435 TGYNICNFDLPYLLNR 450
>gi|19112916|ref|NP_596124.1| DNA polymerase delta catalytic subunit Cdc6 [Schizosaccharomyces
pombe 972h-]
gi|12644199|sp|P30316.2|DPOD_SCHPO RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|6048293|emb|CAB58156.1| DNA polymerase delta catalytic subunit Cdc6 [Schizosaccharomyces
pombe]
Length = 1086
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/617 (64%), Positives = 486/617 (78%), Gaps = 6/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SII+DLQNG A++RRRLA+YCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 469 QKEDVHYSIITDLQNGTADSRRRLAIYCLKDAYLPQRLMDKLMCFVNYTEMARVTGVPFN 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ IKV+SQL RKA Q +LV+PN++ G+++ YEGATV+E G+Y+ PIATLD
Sbjct: 529 FLLARGQQIKVISQLFRKALQHDLVVPNIRVNGTDE-QYEGATVIEPIKGYYDTPIATLD 587
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIM A+NLCY+TL+ A L L + + TP+G+ FVK +++KG+LP IL
Sbjct: 588 FSSLYPSIMQAHNLCYTTLLDSNTAELLKLKQDVDYSVTPNGDYFVKPHVRKGLLPIILA 647
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+LL ARK+AKADLK+ DP +KAVLDGRQLALK+SANSVYGFTGAT G+LPC+ ISSSVT
Sbjct: 648 DLLNARKKAKADLKKETDPFKKAVLDGRQLALKVSANSVYGFTGATNGRLPCLAISSSVT 707
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK +VE ++ GY H+A VIYGDTDSVMV+FGV T+ AMKLG EAA+Y
Sbjct: 708 SYGRQMIEKTKDVVEKRYRIENGYSHDAVVIYGDTDSVMVKFGVKTLPEAMKLGEEAANY 767
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PIKLEFEKVY+PYLLISKKRYAGL+WT + +DKMD+KGIETVRRDNC LV
Sbjct: 768 VSDQFPNPIKLEFEKVYFPYLLISKKRYAGLFWTRTDTYDKMDSKGIETVRRDNCPLVSY 827
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L K+L+D+D+ GA + K ISDLL N++D+S LVITK L+KT DY K AHVE
Sbjct: 828 VIDTALRKMLIDQDVEGAQLFTKKVISDLLQNKIDMSQLVITKALSKT--DYAAKMAHVE 885
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVIIK A+G + Y RSEDPIYVLENNIPID YYLENQ+
Sbjct: 886 LAERMRKRDAGSAPAIGDRVAYVIIKGAQGDQFYMRSEDPIYVLENNIPIDAKYYLENQL 945
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
SKPLLRIFEPIL + LL GDHTR+IS++ PS GIMKFA + +C+GCKA I G
Sbjct: 946 SKPLLRIFEPILGEKASSLLHGDHTRTISMAAPSVGGIMKFAVKVETCLGCKAPIKKGKT 1005
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC +C R AELY + V+QV +LEV F RLWTQCQ CQGS+HQDV+CTSRDCPIFY R
Sbjct: 1006 ALCENCLNRSAELYQRQVAQVNDLEVRFARLWTQCQRCQGSMHQDVICTSRDCPIFYMRI 1065
Query: 997 KAQKDMAEAKLQLDRWN 1013
K + ++ L R++
Sbjct: 1066 AEHKKLQQSVDLLKRFD 1082
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/355 (40%), Positives = 212/355 (59%), Gaps = 26/355 (7%)
Query: 52 EDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP 111
EDE + ++Q + +S+ +W RP L + + I FQQ+D +
Sbjct: 60 EDELAEYASQLDQDEIKSSKDQQWQRPALPA-INPEKDDIYFQQIDSE-----------E 107
Query: 112 LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN 171
+ GS IR+FGVT G+S+ V GF PYFY+ P G P+ + F Q L+ A
Sbjct: 108 FTEGSVPSIRLFGVTDNGNSILVHVVGFLPYFYVKAPVGFRPEMLERFTQDLD-----AT 162
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGI----QLD 227
N V + H + K ++ +Q + PF+KI P +++ R + +RG +L
Sbjct: 163 CNGGV---IDHCIIEMKENLYGFQGNEKSPFIKIFTTNPRILSRARNVFERGEFNFEELF 219
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSD 286
+G+ T+ESN + LRFMIDC++VG NWI +P KY+ + +S CQ+E Y D
Sbjct: 220 PVGV-GVTTFESNTQYLLRFMIDCDVVGMNWIHLPASKYQFRYQNRVSNCQIEAWINYKD 278
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
+IS EG++SKMAP RI+SFDIECAGRKG FP+P+ DPVIQ+A++VT G+ PF+RNV
Sbjct: 279 LISLPAEGQWSKMAPLRIMSFDIECAGRKGVFPDPSIDPVIQIASIVTQYGDSTPFVRNV 338
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ +C+ IVG V F+ + ++L +W F+R+VDPDV+IGYNIC FD+PYL+++
Sbjct: 339 FCVDTCSQIVGTQVYEFQNQAEMLSSWSKFVRDVDPDVLIGYNICNFDIPYLLDR 393
>gi|348533053|ref|XP_003454020.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Oreochromis
niloticus]
Length = 1105
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/619 (66%), Positives = 494/619 (79%), Gaps = 6/619 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL KLM + NY+EMARVTGVP++
Sbjct: 489 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLT 548
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQLLR+A +++LV+P VK G E Y GATV+E G+Y PIATLD
Sbjct: 549 YLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGED--YTGATVIEPEKGYYSLPIATLD 606
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ KL L PE KTP+G+ FVKS+L+KG+LPEILE
Sbjct: 607 FSSLYPSIMMAHNLCYTTLLQKGSVDKLGLAPEDFIKTPTGDLFVKSSLRKGLLPEILEN 666
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+LK+ DP +K VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 667 LLSARKRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTG 726
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ +A+VIYGDTDSVMV+ GV TV+ AM +GREAA+++
Sbjct: 727 FGRQMIEQTKQLVESKYTLSNGYQADAKVIYGDTDSVMVKLGVATVKEAMDIGREAAEWV 786
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKN 758
S F PIKLEFEKVYYPYLLI+KKRYAGLY+ ++ DKMD KGIETVRRDNC LV N
Sbjct: 787 SSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSSASTHDKMDCKGIETVRRDNCPLVAN 846
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL KIL+DRD GAV++ K ISDLL NR+D+S LVITK LT+T +Y K AHVE
Sbjct: 847 LINTCLQKILIDRDPQGAVEHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGKQAHVE 906
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +APN+GDRVPYVIIKAAKGA AY +SEDPIYVLENNIPIDT YYLE Q+
Sbjct: 907 LAERMRKRDAGSAPNLGDRVPYVIIKAAKGAAAYMKSEDPIYVLENNIPIDTQYYLEQQL 966
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-SN 935
SKPLLRIFEPIL + E LL GDHTR ++ T G+M FA+++ +CIGCKA++ ++
Sbjct: 967 SKPLLRIFEPILGESKAESILLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCKAVLKTD 1026
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C CK +E+ELY K + + LE F RLWTQCQ CQGSLH+DVLCTSRDCPIFY R
Sbjct: 1027 AAVCDFCKKKESELYQKEIFHLNTLEERFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMR 1086
Query: 996 KKAQKDMAEAKLQLDRWNF 1014
KK QKD+ + + R+ +
Sbjct: 1087 KKVQKDLDDQSKLVSRFGW 1105
Score = 293 bits (749), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 236/415 (56%), Gaps = 22/415 (5%)
Query: 3 RSNGSARKRPPPTPKESWPNKQQATTPTTPVIDDEFLDE-DVFLDETLLPEDEESLILRD 61
R NGS P K + +P+ +F +E +F + L E+ E D
Sbjct: 5 RHNGSRLMGGPSQAKRGKTMGEWEDSPS------QFEEELSMFEEADLDAEEMEGQAGHD 58
Query: 62 IEQRQD-FASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAII 120
+ D F++ L R P + ++FQQ+D+DY +G++ + S G II
Sbjct: 59 VIPVGDLFSADLNPRWRRPTAPSLDPSSDILVFQQIDLDYYLGETVAGMPGQSQGKVPII 118
Query: 121 RIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQ 178
R+FGVT G+SVCC VHGF PYFY+ P G + F + L + + R++K +
Sbjct: 119 RMFGVTDNGNSVCCHVHGFAPYFYVPAPNGFTSAHLVEFQKELNSAVLKDMRSNKDNISV 178
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V +++ +K S+ Y ++ FL+I +A+P ++A + +L++G + ++ +YE
Sbjct: 179 TVLAVDITRKESMYGYHGKRIIDFLRITMAMPRLIAPAKRLLEQGFKFSHFPTSNYQSYE 238
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYR------------KTAKTLSYCQLEFDCLYSD 286
+N+ F +RFM+D ++VG WIE+P GKYR ++ S CQ E D + D
Sbjct: 239 ANIDFEIRFMVDSDVVGCCWIELPKGKYRVREEKSTDNSSSQSPSKASLCQYEVDVGWMD 298
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
+IS EGE+ ++AP R+LSFDIECAGRKG FPEP DPVIQ+A++V QGE +PFIR V
Sbjct: 299 LISHPAEGEWQRIAPLRVLSFDIECAGRKGIFPEPDKDPVIQIASMVQRQGETEPFIRTV 358
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
TL+SCA IVG ++ F E +L +W +F+R VDPD++ GYNI FD PYL+ +
Sbjct: 359 FTLQSCASIVGSQILCFTQETKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNR 413
>gi|425777959|gb|EKV16108.1| DNA polymerase [Penicillium digitatum Pd1]
gi|425780068|gb|EKV18089.1| DNA polymerase [Penicillium digitatum PHI26]
Length = 1104
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/622 (62%), Positives = 498/622 (80%), Gaps = 9/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 480 QKEDVHHTMITELFNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA+++ LVIPN K ++ YEGATV+E + G+Y P+ATLD
Sbjct: 540 FLLSRGQQVKFISQLFRKAREQQLVIPNSKP--QDEQDYEGATVIEPKRGYYGVPVATLD 597
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KLNL + TP+G+ F + ++KG+L +ILE
Sbjct: 598 FASLYPSIIQAHNLCYTTLLNKSSVEKLNLKKDDDYIVTPNGDMFCTTKVRKGLLSQILE 657
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARKRAK +L D +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS T
Sbjct: 658 ELLSARKRAKRELATETDSFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTT 717
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++T GY H+AEVIYGDTDSVMV+FGV + AM+LG+EAAD+
Sbjct: 718 SYGRQMIEKTKQEVEARYTIANGYSHDAEVIYGDTDSVMVKFGVTELAEAMRLGQEAADF 777
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FI PIKLEFEKVY+PYLLI+KKRYAGLYWTNP+K DKMDTKGIETVRRDNCL+V+N
Sbjct: 778 VSSKFIAPIKLEFEKVYFPYLLINKKRYAGLYWTNPDKHDKMDTKGIETVRRDNCLMVQN 837
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L+KIL+DRD+ GA YVK+TISDLL N++D+S LVITK L+K +DY K AHVE
Sbjct: 838 VIETVLNKILIDRDLDGAQDYVKATISDLLQNKIDMSKLVITKALSKRKEDYAGKQAHVE 897
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM KRDA +AP +GDRV YV+IK + +K YER+EDPI+VLENNIPIDT YYL+NQ+
Sbjct: 898 LAERMHKRDAGSAPTLGDRVAYVMIKGSSDSKGYERAEDPIFVLENNIPIDTKYYLDNQL 957
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+ PL RIFEPIL + + +LL+G+HTRSI+ + + G+MKFAK+ +C+GCK +S+
Sbjct: 958 TNPLNRIFEPILGEKKAGQLLTGEHTRSITKAASNLGGLMKFAKKTQTCMGCKKPLSSKD 1017
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +CS+C+ R ELY KT+++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1018 EMEGAVCSNCRPRLGELYTKTLTKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIF 1077
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +++ L R++F
Sbjct: 1078 YMRMKAKKDVEDSQKDLSRFDF 1099
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 200/344 (58%), Gaps = 26/344 (7%)
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
+++ + + +W RPPL + ++I FQQ+D + + G AI R+FG
Sbjct: 80 KENNSEKDQQWERPPLGE-FDETKETICFQQIDAEEA----------MLMGKPAI-RLFG 127
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT G SVC V GFE Y YI+ P D + LE ++ ++ + ++
Sbjct: 128 VTEAGQSVCLHVTGFEHYLYIAAPVSFTKADCDPYKHFLEQKLGQSFTA------ISSVQ 181
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG---IQLDGL--GMKSFMTYES 239
+ + +I +Q + ++KI V P + A R L+ G + G+ G +T++
Sbjct: 182 LTMRENIYGFQGNQKSYYIKITVTEPKLAARLRSALETGSGSMNYKGMWSGADGILTFD- 240
Query: 240 NVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFS 297
N+ + LRFMID + G W+E GKYR ++ LS CQ+E Y+++++ P GE++
Sbjct: 241 NIQYLLRFMIDTGLAGMAWVEAMAGKYRLLGQSQRLSNCQIEACVDYTNMVAHPPNGEWA 300
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
KMAP R+LSFDIECAGRKG FPEP DPVIQ+AN+VT GE +PFIRNV L +C+ IV
Sbjct: 301 KMAPLRVLSFDIECAGRKGIFPEPNMDPVIQIANVVTRYGETKPFIRNVFVLDTCSLIVN 360
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++ FE E +L AWRDF+ +VDPDV+IGYNI FD PYL+++
Sbjct: 361 TQILEFEKEEKMLNAWRDFVEKVDPDVIIGYNIANFDFPYLLDR 404
>gi|328770280|gb|EGF80322.1| hypothetical protein BATDEDRAFT_16581 [Batrachochytrium dendrobatidis
JAM81]
Length = 1125
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/630 (63%), Positives = 487/630 (77%), Gaps = 18/630 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNGN ETRRRLAVYCLKDAYLP RLL+KLM + NY+EMARVTGVP +
Sbjct: 497 QKEDVHHSIISDLQNGNDETRRRLAVYCLKDAYLPLRLLNKLMLVINYMEMARVTGVPFN 556
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RKA ++L+IP ++ GS++ YEGA V+E GFY+ PIATLD
Sbjct: 557 YLLTRGQQIKVVSQLYRKAIMEDLLIPALEVEGSDE-QYEGAIVIEPLKGFYQVPIATLD 615
Query: 520 FASLYPSIMMAYNLCYSTLVTPED-ARKLNL-PPECVNKTPSGETFVKSNLQKGILPEIL 577
F SLYPSIMMA+NLCYST + D A KLNL +TP+ + F ++L+KG+LP IL
Sbjct: 616 FTSLYPSIMMAHNLCYSTYIANSDLAAKLNLVEGRDYKRTPNNDLFAVASLRKGLLPTIL 675
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
E+LL+ARKRAK+DLK DP ++AVLDGRQLALKISANSVYGFTGAT+G+LP + ISSSV
Sbjct: 676 EDLLSARKRAKSDLKNETDPFKRAVLDGRQLALKISANSVYGFTGATIGKLPLLAISSSV 735
Query: 638 TSYGRQMIEHTKK-----------LVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVE 686
T+YGR MIE TK+ LVE+KF GY+H+A+++YGDTDSVMV+FGV +VE
Sbjct: 736 TAYGRVMIEQTKQASHFLIRYAILLVEEKFQVANGYKHDAQIVYGDTDSVMVKFGVESVE 795
Query: 687 AAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIE 746
+M LGREAA Y++ F KPI L+FEKVYYPYLLI+KKRYAGLYWTNP DK+D KGIE
Sbjct: 796 ESMALGREAATYVTSHFDKPINLDFEKVYYPYLLINKKRYAGLYWTNPSHHDKLDAKGIE 855
Query: 747 TVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKT 806
TVRRD+C LV ++ L K+L+DRD A +YVK ISDLL NR+DLS LVI+K L K
Sbjct: 856 TVRRDSCSLVSTVIETSLRKLLIDRDPKAAEEYVKRVISDLLQNRVDLSKLVISKALGKA 915
Query: 807 GDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNI 866
+Y K AH ELAERMRKRD TAP +GDRV YVIIK +K A AYE++EDPIYVLE+N+
Sbjct: 916 --EYAAKQAHNELAERMRKRDPGTAPALGDRVSYVIIKGSKDAPAYEKAEDPIYVLEHNL 973
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSC 926
PIDT YYLENQ+SKPLLRIFEP+L + LL+GDHTRSIS++ PS+ GIM+F R +C
Sbjct: 974 PIDTKYYLENQLSKPLLRIFEPVLGEKASSLLAGDHTRSISVAAPSSGGIMRFTVRTATC 1033
Query: 927 IGCKALISNG--TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLC 984
+GCK + +C +CK + L+ + V V ELEV F R WTQCQ CQGSLHQDV+C
Sbjct: 1034 LGCKVPLKRNDIAVCDNCKTKLPMLHKRQVDIVNELEVKFSRFWTQCQRCQGSLHQDVIC 1093
Query: 985 TSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
TS+DCPIFY RKK QKDM EA QLDR+++
Sbjct: 1094 TSQDCPIFYMRKKVQKDMKEATAQLDRFDY 1123
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/342 (44%), Positives = 219/342 (64%), Gaps = 17/342 (4%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIG---DSNRELLPLSS-GSAAIIRIFGVTREGH 130
W RP L S + S SI FQQ+DID +G DS ++ LP + ++++R+FG+T EGH
Sbjct: 88 WKRPDLPSIHPS-TDSITFQQIDIDEYVGRTPDSIKKSLPQNHPEESSLLRMFGITEEGH 146
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHF-----HQILEGRMREANRNSKVPQFVRHIEM 185
SV C +HGF PYFY++ P G I + +L G R+ + V I +
Sbjct: 147 SVVCHIHGFSPYFYVAAPHGFQATHIPGLIAALDNAVLSGLHRQRSSGGSA---VLGITL 203
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG-MKSFMTYESNVLFA 244
++ SI YQQ + FL+I V L + +A + L G+ + LG ++ +T+ESN+ +
Sbjct: 204 AERSSIFGYQQGMAL-FLRIDVRLQSYIAPTKRALKDGVSVPNLGTVRIDLTFESNIPYP 262
Query: 245 LRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPF 302
LRFMID +I G +W+E+P Y R+ T S CQ+E D + I+S PEG++SK+AP
Sbjct: 263 LRFMIDLSIQGASWVELPKKCYSIRRRDDTTSNCQIEVDIVAQHIVSYQPEGDWSKIAPL 322
Query: 303 RILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMS 362
RILSFDIECAGR+G FPE DPVIQ+AN+V LQG+ +PF+RN+ TL +C+ I+G VMS
Sbjct: 323 RILSFDIECAGRRGIFPEAQIDPVIQIANMVALQGDTKPFVRNIFTLNTCSSIIGTHVMS 382
Query: 363 FETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
F++E ++L W DFI+EVDPD++IGYNI FD PYL+++ D
Sbjct: 383 FQSESEMLQGWSDFIQEVDPDIIIGYNINGFDFPYLLDRADT 424
>gi|173384|gb|AAA35303.1| DNA polymerase delta [Schizosaccharomyces pombe]
Length = 1086
Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/617 (64%), Positives = 485/617 (78%), Gaps = 6/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SII+DLQNG A++RRRLA+YCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 469 QKEDVHYSIITDLQNGTADSRRRLAIYCLKDAYLPQRLMDKLMCFVNYTEMARVTGVPFN 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ IKV+SQL KA Q +LV+PN++ G+++ YEGATV+E G+Y+ PIATLD
Sbjct: 529 FLLARGQQIKVISQLFCKALQHDLVVPNIRVNGTDE-QYEGATVIEPIKGYYDTPIATLD 587
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIM A+NLCY+TL+ A L L + + TP+G+ FVK +++KG+LP IL
Sbjct: 588 FSSLYPSIMQAHNLCYTTLLDSNTAELLKLKQDVDYSVTPNGDYFVKPHVRKGLLPIILA 647
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+LL ARK+AKADLK+ DP +KAVLDGRQLALK+SANSVYGFTGAT G+LPC+ ISSSVT
Sbjct: 648 DLLNARKKAKADLKKETDPFKKAVLDGRQLALKVSANSVYGFTGATNGRLPCLAISSSVT 707
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK +VE ++ GY H+A VIYGDTDSVMV+FGV T+ AMKLG EAA+Y
Sbjct: 708 SYGRQMIEKTKDVVEKRYRIENGYSHDAVVIYGDTDSVMVKFGVKTLPEAMKLGEEAANY 767
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PIKLEFEKVY+PYLLISKKRYAGL+WT + +DKMD+KGIETVRRDNC LV
Sbjct: 768 VSDQFPNPIKLEFEKVYFPYLLISKKRYAGLFWTRTDTYDKMDSKGIETVRRDNCPLVSY 827
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L K+L+D+D+ GA + K ISDLL N++D+S LVITK L+KT DY K AHVE
Sbjct: 828 VIDTALRKMLIDQDVEGAQLFTKKVISDLLQNKIDMSQLVITKALSKT--DYAAKMAHVE 885
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVIIK A+G + Y RSEDPIYVLENNIPID YYLENQ+
Sbjct: 886 LAERMRKRDAGSAPAIGDRVAYVIIKGAQGDQFYMRSEDPIYVLENNIPIDAKYYLENQL 945
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
SKPLLRIFEPIL + LL GDHTR+IS++ PS GIMKFA + +C+GCKA I G
Sbjct: 946 SKPLLRIFEPILGEKASSLLHGDHTRTISMAAPSVGGIMKFAVKVETCLGCKAPIKKGKT 1005
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC +C R AELY + V+QV +LEV F RLWTQCQ CQGS+HQDV+CTSRDCPIFY R
Sbjct: 1006 ALCENCLNRSAELYQRQVAQVNDLEVRFARLWTQCQRCQGSMHQDVICTSRDCPIFYMRI 1065
Query: 997 KAQKDMAEAKLQLDRWN 1013
K + ++ L R++
Sbjct: 1066 AEHKKLQQSVDLLKRFD 1082
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/355 (40%), Positives = 212/355 (59%), Gaps = 26/355 (7%)
Query: 52 EDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP 111
EDE + ++Q + +S+ +W RP L + + I FQQ+D +
Sbjct: 60 EDELAEYASQLDQDEIKSSKDQQWQRPALPA-INPEKDDIYFQQIDSE-----------E 107
Query: 112 LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN 171
+ GS IR+FGVT G+S+ V GF PYFY+ P G P+ + F Q L+ A
Sbjct: 108 FTEGSVPSIRLFGVTDNGNSILVHVVGFLPYFYVKAPVGFRPEMLERFTQDLD-----AT 162
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGI----QLD 227
N V + H + K ++ +Q + PF+KI P +++ R + +RG +L
Sbjct: 163 CNGGV---IDHCIIEMKENLYGFQGNEKSPFIKIFTTNPRILSRARNVFERGEFNFEELF 219
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSD 286
+G+ T+ESN + LRFMIDC++VG NWI +P KY+ + +S CQ+E Y D
Sbjct: 220 PVGV-GVTTFESNTQYLLRFMIDCDVVGMNWIHLPASKYQFRYQNRVSNCQIEAWINYKD 278
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
+IS EG++SKMAP RI+SFDIECAGRKG FP+P+ DPVIQ+A++VT G+ PF+RNV
Sbjct: 279 LISLPAEGQWSKMAPLRIMSFDIECAGRKGVFPDPSIDPVIQIASIVTQYGDSTPFVRNV 338
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ +C+ IVG V F+ + ++L +W F+R+VDPDV+IGYNIC FD+PYL+++
Sbjct: 339 FCVDTCSQIVGTQVYEFQNQAEMLSSWSKFVRDVDPDVLIGYNICNFDIPYLLDR 393
>gi|324120694|dbj|BAJ78738.1| DNA polymerase delta catalytic subunit [Inocellia japonica]
Length = 1097
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/619 (63%), Positives = 492/619 (79%), Gaps = 7/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+ISDLQ GN +TRRRLAVYCLKDAYLP RLLDKLM + NY+EMARVTGVP+S
Sbjct: 479 QKEDVHHSVISDLQQGNPQTRRRLAVYCLKDAYLPLRLLDKLMCMINYMEMARVTGVPLS 538
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKA++K+ VIP G+++ YEGATV+E + G+Y+ PIATLD
Sbjct: 539 SLLTRGQQIKVVSQLLRKAREKDFVIP-AYSGGTQEDQYEGATVIEPKRGYYDDPIATLD 597
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY++L+ P KL L P+ ++TP+G FVK +++KG+LPEILE
Sbjct: 598 FSSLYPSIMMAHNLCYTSLLQPGVKEKLGLTPDQYSRTPAGNFFVKQSVRKGLLPEILEN 657
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AKADLK+ DPL+ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 658 LLAARKKAKADLKKETDPLKCKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 717
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE ++ GY+H+A VIYGDTDSVM++FGV T+E AM LG+EAA+Y+
Sbjct: 718 YGRTMIEQTKQEVEQRYCVANGYKHDAVVIYGDTDSVMIKFGVKTLEDAMALGKEAAEYV 777
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FIKPIKLEFEKVYYPYLLISKKRYAGLY+T + +DKMD KG+ETVRRDNC LV N+
Sbjct: 778 SSKFIKPIKLEFEKVYYPYLLISKKRYAGLYFTRTDTYDKMDCKGLETVRRDNCPLVANM 837
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DRD GA++Y K ISDLL NR+D+S LV+TK LTK+ DY K AHVEL
Sbjct: 838 MNTCLQKLLIDRDPDGALEYAKQVISDLLCNRIDISQLVVTKELTKS--DYAAKQAHVEL 895
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD TAP +GDRVPYV++ AAKG AY ++EDPIYVLEN+IPID+ YYLENQ+S
Sbjct: 896 ANKMKKRDPGTAPKLGDRVPYVLVAAAKGTPAYMKAEDPIYVLENSIPIDSSYYLENQLS 955
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
KPL+RIFEPIL + ++ LL GDHTR+ ++ T + F +R+ +CIGCK+++ +
Sbjct: 956 KPLIRIFEPILGDKAESLLLRGDHTRTKAVVTSRVGALSAFTRRKETCIGCKSVLPGDGD 1015
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C HC EA+LY + +S++ ELE F RLWTQCQ CQGSLH++VLCTSRDCPIFY R
Sbjct: 1016 TAVCKHCIPNEAKLYQQELSRLCELENRFSRLWTQCQRCQGSLHEEVLCTSRDCPIFYMR 1075
Query: 996 KKAQKDMAEAKLQLDRWNF 1014
KK Q D+ L R+
Sbjct: 1076 KKVQMDLNSQDKVLQRFGL 1094
Score = 320 bits (820), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/382 (43%), Positives = 232/382 (60%), Gaps = 20/382 (5%)
Query: 35 DDEF---LDEDVFLDETLLPE----DEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQ 87
DDEF +E + L + + E D + L+ E +Q KW+RP
Sbjct: 27 DDEFPGTFEEQLALMDQIEAETNEVDSQELVGEGPETQQTSV----KWSRP-PPPPLNPN 81
Query: 88 CQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISC 147
S++FQQLDID+ G + + G I+R++GVT EG+SVCC VHGF PY ++
Sbjct: 82 SDSLIFQQLDIDHYTGKPMKGMPGHQIGPVPIMRMYGVTMEGNSVCCHVHGFSPYLFVQV 141
Query: 148 PQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKI 205
P+ F L + + R+++ + + V +E+ K +I Y+ K PFLKI
Sbjct: 142 PETFTDGHCLPFKNALNKAILDDMRSNREGLTEAVLAVELQMKENIYGYRGGKKMPFLKI 201
Query: 206 VVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGK 265
VALP ++A R +L++ + LG ++ +ESN+ F +RFM+D N+VG +W+E+P K
Sbjct: 202 TVALPRLIAPARRLLEKEVVYPALGTYNYQAFESNIDFDIRFMVDTNVVGCSWVELPPKK 261
Query: 266 YRKTAK------TLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFP 319
+R +K +S CQ+E D + D IS PEGE+SK+APFRILSFDIECAGRKG FP
Sbjct: 262 WRMRSKGDSSLPMMSRCQIEVDVSWEDFISHPPEGEWSKVAPFRILSFDIECAGRKGIFP 321
Query: 320 EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIRE 379
EP HDPVIQ+AN+V QG +PF+RNV TL +CAPIVG V+SF E ++L W DF+RE
Sbjct: 322 EPNHDPVIQIANMVVKQGAPEPFLRNVFTLNTCAPIVGCQVLSFTRENEMLEKWADFVRE 381
Query: 380 VDPDVMIGYNICKFDLPYLIEK 401
VDPDV GYNI FDLPYL+ +
Sbjct: 382 VDPDVFTGYNINNFDLPYLLNR 403
>gi|169849845|ref|XP_001831621.1| delta DNA polymerase [Coprinopsis cinerea okayama7#130]
gi|116507259|gb|EAU90154.1| delta DNA polymerase [Coprinopsis cinerea okayama7#130]
Length = 1081
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/624 (62%), Positives = 485/624 (77%), Gaps = 13/624 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQNG E+RRRLA+YCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 460 QKEDVHHSVITELQNGTPESRRRLAIYCLKDAYLPQRLMDKLMCFVNYAEMARVTGVPFN 519
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQSIKVLSQL RKA + +IP++K G + YEGATV+E + G+Y+ PIATLD
Sbjct: 520 FLLARGQSIKVLSQLYRKANSEGYLIPSMKGGGDGEDQYEGATVIEPKKGYYDVPIATLD 579
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ +L+L + +TP+ + F +KG+LP ILE
Sbjct: 580 FSSLYPSIMMAHNLCYTTLLNKATIDRLSLVKDVDYVQTPNNDYFATPVRRKGLLPTILE 639
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L++ARKRAKADLK+ DP +KAVLDGRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT
Sbjct: 640 DLISARKRAKADLKKETDPFKKAVLDGRQLALKISANSVYGFTGATIGKLPCLAISSSVT 699
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK+ VE ++T G+EH+AEVIYGDTDSVMV+FG + M LG EAAD
Sbjct: 700 AYGRQMIERTKQEVEAEYTIANGHEHDAEVIYGDTDSVMVRFGPTDLAKVMALGAEAADL 759
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ F +PIKLEFEKVYYPYLLISKKRYAGLYWT +K+DKMD+KGIETVRRDNC LV
Sbjct: 760 VTQHFARPIKLEFEKVYYPYLLISKKRYAGLYWTRADKWDKMDSKGIETVRRDNCRLVST 819
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CLHK+L+DRD+ A Y K ISDLL N++D+S LVITK L+K + Y K AHVE
Sbjct: 820 VIETCLHKMLIDRDVKAAEDYTKRIISDLLQNKIDMSQLVITKALSK--EKYAGKQAHVE 877
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA +M+ RDA +AP VGDRV YVI+K A+ A AYE+SEDP++VLENN+PIDT YYL+NQ+
Sbjct: 878 LAAKMKDRDAGSAPAVGDRVAYVIVKGARNAAAYEKSEDPLWVLENNLPIDTRYYLDNQL 937
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS---- 934
SKPL+RIFEPIL ++ LLSGDHTRSI I+TP+ G+MKFA + +C+GCK +
Sbjct: 938 SKPLMRIFEPILGEKAQSLLSGDHTRSIQIATPTGGGLMKFAVKTETCLGCKTPLRTTNS 997
Query: 935 -NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
NG +C +C+ + LY K V EL+ F RLWTQCQ CQGSLHQDVLC+S+DCPIFY
Sbjct: 998 LNGAVCKNCRAKIPGLYQKQVLTCSELQTRFARLWTQCQRCQGSLHQDVLCSSKDCPIFY 1057
Query: 994 RRKKAQKDMAE-----AKLQLDRW 1012
RKKAQKD+ + A+ + D W
Sbjct: 1058 MRKKAQKDVEDANAILARFEADEW 1081
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 149/331 (45%), Positives = 188/331 (56%), Gaps = 28/331 (8%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
WARP L + SI+FQQ++I I ++ S +R+FGVT+EGHSV
Sbjct: 78 WARPTLPP-LDPKKDSIIFQQIEI---INSTD------YSHGGTTLRMFGVTQEGHSVLA 127
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
+ F PYFYI P+G + I L + V+ IE V KRSI Y
Sbjct: 128 NITTFLPYFYIVYPRGFTDEHIEPLRNYLNNQFDNG-------PLVKKIEKVMKRSIWEY 180
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC--N 252
+ PFLK+ + P V R G L + Y +L+A M+D
Sbjct: 181 KGDDVSPFLKLTIVEPKDVPKVRDEYSLGPVL----WREAYLY---ILYAFLKMVDACTR 233
Query: 253 IVGGNWIEVPVGKYRKT--AKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIE 310
+VG NWIEVP G Y K S CQ+E D Y IS PEG++S +AP RILSFDIE
Sbjct: 234 VVGMNWIEVPAGAYTMIPPEKKKSTCQIEIDVPYDAFISHAPEGQWSTLAPLRILSFDIE 293
Query: 311 CAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVL 370
CAGRKG FPE + DPVIQ+AN+VT QGE QPFIRNV TL +C+ IVG V+SFE E +L
Sbjct: 294 CAGRKGVFPEASVDPVIQIANMVTRQGESQPFIRNVFTLNTCSHIVGSQVLSFEDEGKML 353
Query: 371 LAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
AWRDF+ EVDPD++IGYNI FD PYL+++
Sbjct: 354 QAWRDFVSEVDPDLVIGYNISGFDFPYLMDR 384
>gi|324120688|dbj|BAJ78735.1| DNA polymerase delta catalytic subunit [Petrobiellus takunagae]
Length = 1005
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/616 (65%), Positives = 485/616 (78%), Gaps = 6/616 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSIISDLQNGN++TRRRLAVYCLKD+YLP RLLDKLM I NY+EMARVTGV +
Sbjct: 388 QKEDVQHSIISDLQNGNSQTRRRLAVYCLKDSYLPLRLLDKLMCIINYMEMARVTGVSLP 447
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKA++K+ VIP + GS++ YEGATV+E G+Y+ PIATLD
Sbjct: 448 SLLTRGQQIKVVSQLLRKAREKDFVIPTYQGTGSDE-QYEGATVIEPERGYYDVPIATLD 506
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P KL L P+ +TP+G FVKS ++KG+LPEILE
Sbjct: 507 FSSLYPSIMMAHNLCYTTLLQPGWVNKLGLTPDLYVETPAGSMFVKSTVRKGLLPEILES 566
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AK DLK+ DPL VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 567 LLAARKKAKEDLKKETDPLRCKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 626
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+ VE+KF GY HNA+VIYGDTDSVMV+FGV TV AM LG+E ADY+
Sbjct: 627 FGRQMIEFTKQQVENKFCVENGYSHNAKVIYGDTDSVMVRFGVSTVAEAMVLGKEGADYV 686
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FIKPIKLEFEKVY+PYLLI+KKRYAGLY+T P+ DKMD KG+ETVRRDNC V N+
Sbjct: 687 SSKFIKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDVHDKMDCKGLETVRRDNCTFVANI 746
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
++ CL K+L++R+ GA+ YVK ISDLL NR+D+S LVITK LTK +DY K AHVEL
Sbjct: 747 MSMCLQKLLIERNPTGAIDYVKQVISDLLCNRVDISQLVITKELTK--NDYAAKQAHVEL 804
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +MRKRDA TAP +GDRVPYVI+ AAKG AY ++EDPIYVLEN+IPID YYLENQ+S
Sbjct: 805 ANKMRKRDAGTAPKLGDRVPYVIVAAAKGTPAYNKAEDPIYVLENSIPIDALYYLENQLS 864
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT- 937
KPLLRIFEPIL + ++ LL G+HTR+ ++ T + F ++ SC+GCKA++ N +
Sbjct: 865 KPLLRIFEPILGDKAESILLRGEHTRTKTVVTSRVGALSSFTTKRESCVGCKAVLPNNST 924
Query: 938 -LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
+C HC EA LY + + ++ LE F RLWTQCQ CQGSLH+DVLCTSRDCPIFY RK
Sbjct: 925 AVCEHCSRDEALLYRRELDKLSNLEDKFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMRK 984
Query: 997 KAQKDMAEAKLQLDRW 1012
K Q D+ L R+
Sbjct: 985 KVQLDLTTQDKVLQRF 1000
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/313 (46%), Positives = 207/313 (66%), Gaps = 11/313 (3%)
Query: 99 DYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D+ IG + +G ++R++GVT EG+SVCC VHGF PYFY+ P+ +
Sbjct: 1 DHYIGRPLPGMPGAQTGPVPVMRMYGVTAEGNSVCCHVHGFSPYFYVQPPETFKREHCGP 60
Query: 159 FHQILEG---RMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVAS 215
F + L + + NR+S + + V +E+V++ +I Y+ K FLKI++ALP ++A
Sbjct: 61 FKESLNRFILKDMKTNRDS-LSEAVLCVEIVERENIYSYRGGKKLSFLKIILALPKLIAP 119
Query: 216 CRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY-------RK 268
+ +L+R LG S+ +ESN+ F +RFM+D IVG NWIE+P K+ ++
Sbjct: 120 AKRLLERESVFPTLGPHSYAAFESNIDFDIRFMVDAEIVGCNWIELPASKWQLRTRDDKR 179
Query: 269 TAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQ 328
T + +S CQ+E D + ++S +PEG+++K+APFRILSFDIECAGRKG FPEP HDPVIQ
Sbjct: 180 TLQPVSRCQIECDVSWEILVSHYPEGDWAKVAPFRILSFDIECAGRKGIFPEPNHDPVIQ 239
Query: 329 VANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGY 388
+AN+V QGE+ PFIRNV TL +CAPIVG +V+SF E ++L W DF+RE DPD++ GY
Sbjct: 240 IANMVIRQGEQDPFIRNVFTLGTCAPIVGCEVLSFAREAELLKRWADFVREADPDIVTGY 299
Query: 389 NICKFDLPYLIEK 401
NI FD PYL+ +
Sbjct: 300 NINNFDFPYLLNR 312
>gi|358057090|dbj|GAA96997.1| hypothetical protein E5Q_03671 [Mixia osmundae IAM 14324]
Length = 769
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/603 (64%), Positives = 483/603 (80%), Gaps = 15/603 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++LQNG E+RRRLAVYCLKDAYLPQRLLDKLM NY+EMARVTGVP +
Sbjct: 150 QKEDVHHSIITELQNGTPESRRRLAVYCLKDAYLPQRLLDKLMSFINYIEMARVTGVPFN 209
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RKA ++ VIP++K GS++ YEGATV+E G+Y+ PIATLD
Sbjct: 210 YLLSRGQQIKVVSQLFRKAGEEGYVIPSLKGEGSDE-QYEGATVIEPTRGYYDVPIATLD 268
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNK----TPSGETFVKSNLQKGILPE 575
F+SLYPSIMMA+NLCY+TL+ + +L ++K TP+G+ F KS+ +KG+LP
Sbjct: 269 FSSLYPSIMMAHNLCYTTLMDKKTIDRLGF---LIDKDYIMTPNGDFFAKSHKRKGLLPT 325
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+LE+LL+ARKRAK D+K DP ++AVLDGRQLALKISANSVYGFTGATVG+LPC+ IS+
Sbjct: 326 VLEDLLSARKRAKNDMKNETDPFKRAVLDGRQLALKISANSVYGFTGATVGKLPCLPIST 385
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
S T+YGR+MIE TK+ V+DK+ T GYE++AEVIYGDTDSVMV+FG + MKLG EA
Sbjct: 386 STTAYGREMIERTKQEVQDKYNTKNGYENDAEVIYGDTDSVMVRFGTKDLAETMKLGAEA 445
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A Y++ F++PIKLEFEKVYYPYLLISKKRYAGLYWT P+++DKMDTKGIETVRRDNC L
Sbjct: 446 AAYVTEKFVRPIKLEFEKVYYPYLLISKKRYAGLYWTRPDRYDKMDTKGIETVRRDNCQL 505
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V ++ CL+K+L++RD+ GA +YVK ISDLL N++DLS LVITK L KT DY+ K A
Sbjct: 506 VSTVIETCLNKMLIERDLSGAEEYVKQVISDLLQNKIDLSQLVITKALAKT--DYKAKQA 563
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
HVELAERMRKRDA +AP++GDRV +VIIK A+AYE+SEDPIYVL++N+PIDT YYL+
Sbjct: 564 HVELAERMRKRDAGSAPSLGDRVAFVIIKGTTDARAYEKSEDPIYVLDHNLPIDTRYYLD 623
Query: 876 NQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-- 933
NQ+SKPL+RIFEPI+ S LL+GDHTR++SI P+ G+M F K+ ++C+GCK+ I
Sbjct: 624 NQLSKPLMRIFEPIMGEKSSSLLAGDHTRAVSIKAPTKGGLMGFVKKTMTCLGCKSTIVP 683
Query: 934 ---SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
N +C +C R AELY KT++ + E + RLWTQCQ CQGSLHQDV+CTS DCP
Sbjct: 684 KKGQNVAVCKNCAPRTAELYYKTLALASQFETAYARLWTQCQRCQGSLHQDVICTSADCP 743
Query: 991 IFY 993
I+Y
Sbjct: 744 IYY 746
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 56/70 (80%)
Query: 332 LVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNIC 391
+VT QGE++PFIRNV TL +C IVG +V+SF+ E+++L WR+FI E DPDV+IGYNI
Sbjct: 1 MVTRQGEQKPFIRNVFTLNTCQGIVGSEVLSFQEEKELLHQWRNFIVEADPDVIIGYNIA 60
Query: 392 KFDLPYLIEK 401
FD+PYLI +
Sbjct: 61 NFDIPYLIAR 70
>gi|47219672|emb|CAG02717.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1008
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/619 (66%), Positives = 494/619 (79%), Gaps = 6/619 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL KLM + NY+EMARVTGVP++
Sbjct: 392 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLT 451
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQLLR+A +++LV+P VK G E Y GATV+E G+Y PIATLD
Sbjct: 452 YLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGED--YTGATVIEPEKGYYSIPIATLD 509
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ K +L E KTP+G+ FVKS+++KG+LPEILE
Sbjct: 510 FSSLYPSIMMAHNLCYTTLLQKGAQDKYSLSREDFIKTPTGDLFVKSSVRKGLLPEILEN 569
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+LK+ DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 570 LLSARKRAKAELKKETDPFKRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTG 629
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ +A+VIYGDTDSVMV+ GV TV+ AM +G+EAA+++
Sbjct: 630 FGRQMIEQTKQLVESKYTISNGYQADAKVIYGDTDSVMVKLGVATVKEAMSIGKEAAEWV 689
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKN 758
S FI PIKLEFEKVYYPYLLI+KKRYAGLY+ +N E DKMD KGIETVRRDNC LV N
Sbjct: 690 SSHFIMPIKLEFEKVYYPYLLINKKRYAGLYFSSNAETHDKMDCKGIETVRRDNCPLVAN 749
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL KIL+DRD GAV + K ISDLL NR+D+S LVITK LT+T +Y K AHVE
Sbjct: 750 LINTCLQKILIDRDPQGAVDHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGKQAHVE 809
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +APN+GDRVPYVIIKAAKGA AY +SEDPIYVLEN+IPIDT YYLE Q+
Sbjct: 810 LAERMRKRDAGSAPNLGDRVPYVIIKAAKGAAAYMKSEDPIYVLENSIPIDTQYYLEQQL 869
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-SN 935
SKPLLRIFEPIL + E LL GDHTR ++ T G+M FA+++ +CIGC+A++ +N
Sbjct: 870 SKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCRAVLKTN 929
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C CK +E+ELY K + + LE F RLWTQCQ CQGSLH+DVLCTSRDCPIFY R
Sbjct: 930 AAVCDFCKKKESELYQKEIYHLNTLEERFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMR 989
Query: 996 KKAQKDMAEAKLQLDRWNF 1014
KK QKD+ + + R+ +
Sbjct: 990 KKVQKDLDDQSKLVSRFGW 1008
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/330 (39%), Positives = 197/330 (59%), Gaps = 19/330 (5%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+W RPP + +++FQQ+D+DY +G + + S G I+R+FGVT G+
Sbjct: 4 RWRRPP-APALNPSTDTLVFQQIDLDYYLGVTVAGMPGQSHGKVPIVRMFGVTDNGNQRF 62
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
H +G D + ++ MR N V V +++ +K ++
Sbjct: 63 TAAH-------------LG-DFQKELNSVVLKDMRGNKDNISVT--VLAVDITRKENMYG 106
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNI 253
Y ++S FL+I +A+P ++A + +L++G++ + F +ESN+ F +RFM+D ++
Sbjct: 107 YHGKRSLDFLRITMAMPRLIAPAKRLLEQGLKFGPFPFQCFQAFESNIDFEIRFMVDTDV 166
Query: 254 VGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC 311
VG WIE+P GKYR + T+S CQ E D ++D IS EGE+ ++AP R+LSFDIEC
Sbjct: 167 VGCCWIELPKGKYRVREEKDTVSLCQYEVDIGWTDFISHPAEGEWQRIAPLRVLSFDIEC 226
Query: 312 AGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLL 371
AGRKG FPE DPVIQ+A++V QGE +PFIR V TL+SCA IVG ++ F E +L
Sbjct: 227 AGRKGIFPEADKDPVIQIASMVQRQGETEPFIRTVFTLQSCASIVGSQILCFTQENKLLQ 286
Query: 372 AWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+W +F+R VDPD++ GYNI FD PYL+ +
Sbjct: 287 SWAEFLRTVDPDIITGYNIQNFDFPYLLNR 316
>gi|85103616|ref|XP_961558.1| DNA polymerase delta catalytic subunit [Neurospora crassa OR74A]
gi|18376276|emb|CAD21389.1| probable DNA-directed DNA polymerase III [Neurospora crassa]
gi|28923105|gb|EAA32322.1| DNA polymerase delta catalytic subunit [Neurospora crassa OR74A]
Length = 1104
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/622 (62%), Positives = 499/622 (80%), Gaps = 10/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L G E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 480 QKEDVHHSMITELFEGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ +K LSQL RKA ++ LVIPN++ SE+ YEGATV+E G+Y+ PIATLD
Sbjct: 540 FLLARGQQVKFLSQLFRKALEQKLVIPNLRPESSEE-QYEGATVIEPTRGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TL+ D + +L E TP+G+ FV + +KG+L +ILE
Sbjct: 599 FASLYPSIMQAHNLCYTTLIKKRDIERWDLKKDEDYIVTPNGDMFVTTKQRKGLLAQILE 658
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARK+AK +L KDP +KAVL+GRQLALK+SANSVYG TGAT G+LPC+EI+SSVT
Sbjct: 659 ELLSARKQAKRELAVEKDPFKKAVLNGRQLALKVSANSVYGLTGATNGKLPCLEIASSVT 718
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMIE TKK VE+++T GY H+A+VIYGDTDSVMV+FG + AMKLG++A++Y
Sbjct: 719 SFGRQMIERTKKEVEERYTIANGYSHDAQVIYGDTDSVMVKFGTKDLAEAMKLGQDASEY 778
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+SG FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 779 VSGKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQT 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+D+D+PGA YVK TI+DLL N++D+S LVITK LTK ++Y+ K AHVE
Sbjct: 839 VIEKVLRMILIDQDVPGAQAYVKDTIADLLQNKIDMSKLVITKALTK--ENYDAKQAHVE 896
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV++K A G+K +ERSEDPIYVLE+N+PIDT YYL+NQ+
Sbjct: 897 LAQRMKKRDAGSAPGLGDRVAYVMVKGATGSKNFERSEDPIYVLEHNVPIDTKYYLDNQL 956
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + +K LL GDHTR +S++ P+ G+MKFAK+ +C+GCK +
Sbjct: 957 AKPLGRIFEPILGETKAKSLLHGDHTRVVSVAAPTVGGLMKFAKKTQTCMGCKKPLTGKE 1016
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
S G +C+ R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1017 ESQGAVCADDAPRVGELYKKTLDRVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1076
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A +L R++F
Sbjct: 1077 YMRMKAKKDLEDANKELQRFDF 1098
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 204/357 (57%), Gaps = 29/357 (8%)
Query: 55 ESLILRDIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
ES +L + Q +Q+ + + W RPPL + Y S+ FQ ++ +
Sbjct: 68 ESEVLERMSQDISDLKQNNSEKDQAWERPPLPATYNPATDSLCFQSIEAEE--------- 118
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
G A I++FGVT G+SV V F+ Y Y+ P GPDD + LE ++
Sbjct: 119 -GFLHGGQATIKLFGVTENGNSVLLHVKDFKHYLYVQAPVSFGPDDCPKYRAFLETQL-- 175
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMY-YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDG 228
+P H + R MY +Q P++K+ V P + R +++ + +
Sbjct: 176 -----AMPTPAIHSVTLTMRENMYGFQGNTQNPYIKVTVNDPKFLPRVRRLIETN-KANW 229
Query: 229 LGM----KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLY 284
GM S MT++ ++ + LRFM+DC+I G +W+E P G Y+ S CQ+E + Y
Sbjct: 230 KGMWKSDGSIMTFD-DIQYLLRFMVDCSIAGMSWVEAPAGSYQLVNDKHSNCQIEAEMSY 288
Query: 285 SDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIR 344
D+I+ P GE+SKMAP RILSFDIECAGRKG FPEP HD VIQ+AN+VT GEK+PF+R
Sbjct: 289 RDLIAHKPVGEWSKMAPLRILSFDIECAGRKGIFPEPQHDSVIQIANIVTKYGEKKPFVR 348
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
NV L + +PIV ++SF+ E D+L WR+F+ +VDPD++IGYNI FD PYL+++
Sbjct: 349 NVFCLDTTSPIVATQILSFDREEDMLREWRNFLEQVDPDIIIGYNIANFDFPYLLDR 405
>gi|324120716|dbj|BAJ78749.1| DNA polymerase delta catalytic subunit [Teleogryllus emma]
Length = 1089
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/615 (64%), Positives = 489/615 (79%), Gaps = 5/615 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH+IISDLQ+G+ +TRRRLAVYCLKDAYLP RLLDKLM I NY+EMARVTGVP+S
Sbjct: 473 QKEDVHHNIISDLQHGDPQTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVPLS 532
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLR AK K ++P +G ++ YEGATV+E + G+Y PI TLD
Sbjct: 533 CLLTRGQQIKVVSQLLRTAKPKGYLMP-AYSSGVQEEQYEGATVIEPKKGYYSDPITTLD 591
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ KL+L + KTP+G FVK+ ++KG+LPEILE
Sbjct: 592 FSSLYPSIMMAHNLCYTTLLPSGMKEKLSLTQDQFTKTPAGNFFVKAPVRKGLLPEILEN 651
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARKRAKADLK+ DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 652 LLGARKRAKADLKKETDPFKQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 711
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE F GY+++A VIYGDTDSVMV+FGV T+E AM+LGREAA+++
Sbjct: 712 YGRTMIEQTKQEVESHFNVSNGYQNDAVVIYGDTDSVMVKFGVKTLEEAMELGREAAEFV 771
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ F+KPIKLEFEKVYYPYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDN LV N+
Sbjct: 772 TEKFVKPIKLEFEKVYYPYLLINKKRYAGLYFTRPDKYDKMDCKGIETVRRDNSPLVANM 831
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DRD GA++Y K ISDLL NR+D+S LVITK LTK+ DY K AHV L
Sbjct: 832 MNTCLQKLLIDRDPQGAMEYAKQVISDLLCNRIDISQLVITKELTKS--DYAAKQAHVTL 889
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AE+M+KRDA TAP +GDRVPYV+I AAK AY ++EDPIYVLENNIPID+ YYLENQ+S
Sbjct: 890 AEKMKKRDAGTAPKLGDRVPYVLIAAAKNTPAYMKAEDPIYVLENNIPIDSTYYLENQLS 949
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-SNGT 937
KPLLRIFEPIL + ++ LL GDHTRS ++ T + F K++ +CIGCKA++ +NG
Sbjct: 950 KPLLRIFEPILGDKAESLLLRGDHTRSKTVVTSKVGALSAFTKKKETCIGCKAVLHTNGA 1009
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LCSHC +EA+LY + + + +ELE F RLWTQCQ CQGSLH++VLCTSRDCPIFY RKK
Sbjct: 1010 LCSHCSCQEAKLYQQELFRFRELEDKFSRLWTQCQRCQGSLHEEVLCTSRDCPIFYMRKK 1069
Query: 998 AQKDMAEAKLQLDRW 1012
Q D+ + R+
Sbjct: 1070 VQMDLVTQDKLIQRF 1084
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/387 (43%), Positives = 235/387 (60%), Gaps = 9/387 (2%)
Query: 21 PNKQQATTPTTPVIDDEFLDEDVFLD--ETLLPEDEESLILRDIEQRQDFASRLAKWARP 78
PNK+ F DE ++D E+ E ES L + S A+W+RP
Sbjct: 14 PNKKSRNLSADDDFPGSFADELAYMDQLESESQEFTESPELLGVGPETGQTS--ARWSRP 71
Query: 79 PLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHG 138
P+ Q ++FQQ+DID+ G + G ++R++GVT EG+SVCC VHG
Sbjct: 72 PVPP-LEPQKDVLVFQQIDIDHYTGVPMVGMPGAQQGPVPVMRMYGVTMEGNSVCCHVHG 130
Query: 139 FEPYFYISCPQGMGPDDISHFHQILEGRMREAN--RNSKVPQFVRHIEMVQKRSIMYYQQ 196
F PYF++S P G F + L M N KVP V +E+V+K++++ Y+
Sbjct: 131 FSPYFFVSAPDGFSDKHCHEFKEALNSAMLADNYIARDKVPVAVLAVEIVKKQNMVGYRG 190
Query: 197 QKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGG 256
+ F+K+ V LP +A + +L+RGI L S+ +ESN+ F +RFM+D +VG
Sbjct: 191 EDLSVFIKVTVTLPRHIAGAKRLLERGISFSSLPPHSYQFFESNIDFDIRFMVDAEVVGC 250
Query: 257 NWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGR 314
+W+E+P G++R +KT S CQ+E D + IS PEGE+SK+APFRILSFDIECAGR
Sbjct: 251 SWVELPAGEWRLRSKTDMKSRCQIEVDVAWDKFISHAPEGEWSKVAPFRILSFDIECAGR 310
Query: 315 KGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWR 374
KG FPE DPVIQ+AN+V QG+ +PF+RNV TL +CAPIVG V+SF+ ERD+L W
Sbjct: 311 KGIFPEAQQDPVIQIANMVINQGDHEPFLRNVFTLDTCAPIVGCQVLSFKEERDMLEKWA 370
Query: 375 DFIREVDPDVMIGYNICKFDLPYLIEK 401
DF+REVDPD+ GYNI FD PYL+++
Sbjct: 371 DFVREVDPDLFTGYNINNFDFPYLLDR 397
>gi|336472726|gb|EGO60886.1| hypothetical protein NEUTE1DRAFT_120002 [Neurospora tetrasperma FGSC
2508]
gi|350294031|gb|EGZ75116.1| DNA polymerase delta catalytic subunit [Neurospora tetrasperma FGSC
2509]
Length = 1104
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/622 (62%), Positives = 499/622 (80%), Gaps = 10/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L G E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 480 QKEDVHHSMITELFEGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ +K LSQL RKA ++ LVIPN++ SE+ YEGATV+E G+Y+ PIATLD
Sbjct: 540 FLLARGQQVKFLSQLFRKALEQKLVIPNLRPESSEE-QYEGATVIEPTRGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TL+ D + +L E TP+G+ FV + +KG+L +ILE
Sbjct: 599 FASLYPSIMQAHNLCYTTLIKKRDIERWDLKKDEDYIVTPNGDMFVTTKQRKGLLAQILE 658
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARK+AK +L KDP +KAVL+GRQLALK+SANSVYG TGAT G+LPC+EI+SSVT
Sbjct: 659 ELLSARKQAKRELAVEKDPFKKAVLNGRQLALKVSANSVYGLTGATNGKLPCLEIASSVT 718
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMIE TKK VE+++T GY H+A+VIYGDTDSVMV+FG + AMKLG++A++Y
Sbjct: 719 SFGRQMIERTKKEVEERYTIANGYSHDAQVIYGDTDSVMVKFGTKDLAEAMKLGQDASEY 778
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+SG F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 779 VSGKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQT 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+D+D+PGA YVK TI+DLL N++D+S LVITK LTK ++Y+ K AHVE
Sbjct: 839 VIEKVLRMILIDQDVPGAQAYVKDTIADLLQNKIDMSKLVITKALTK--ENYDAKQAHVE 896
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV++K A G+K +ERSEDPIYVLE+N+PIDT YYL+NQ+
Sbjct: 897 LAQRMKKRDAGSAPGLGDRVAYVMVKGATGSKNFERSEDPIYVLEHNVPIDTKYYLDNQL 956
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + +K LL GDHTR +S++ P+ G+MKFAK+ +C+GCK +
Sbjct: 957 AKPLGRIFEPILGETKAKSLLHGDHTRVVSVAAPTVGGLMKFAKKTQTCMGCKKPLTGKE 1016
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
S G +C+ R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1017 ESQGAVCADDAPRVGELYKKTLDRVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1076
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A +L R++F
Sbjct: 1077 YMRMKAKKDLEDANKELQRFDF 1098
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/408 (37%), Positives = 224/408 (54%), Gaps = 41/408 (10%)
Query: 4 SNGSARKR-----PPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLI 58
S+ SA+KR PP + ++ N + P+T + F E L + S
Sbjct: 29 SSDSAKKRRLDDVPPSSRFRTFKNDGKGRIPSTQ-------PKSAFESEVL---ERMSQD 78
Query: 59 LRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAA 118
+ D+ +Q+ + + W RPPL + Y S+ FQ ++ + G A
Sbjct: 79 ISDL--KQNNSEKDQAWERPPLPATYNPATDSLCFQSIEAEE----------GFLHGGQA 126
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
I++FGVT G+SV V F+ Y Y+ P GPDD + LE ++ +P
Sbjct: 127 TIKLFGVTENGNSVLLHVKDFKHYLYVQAPVSFGPDDCPKYRAFLETQL-------AMPT 179
Query: 179 FVRHIEMVQKRSIMY-YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM----KS 233
H + R MY +Q P++K+ V P + R +++ + + GM S
Sbjct: 180 PAIHSVTLTMRENMYGFQGNTQNPYIKVTVNDPKFLPRVRRLIETN-KANWKGMWKSDGS 238
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPE 293
MT++ ++ + LRFM+DC+I G +W+E P G Y+ S CQ+E + Y D+I+ P
Sbjct: 239 IMTFD-DIQYLLRFMVDCSIAGMSWVEAPAGSYQLVNDKHSNCQIEAEMSYRDLIAHKPV 297
Query: 294 GEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCA 353
GE+SKMAP RILSFDIECAGRKG FPEP HD VIQ+AN+VT GEK+PF+RNV L + +
Sbjct: 298 GEWSKMAPLRILSFDIECAGRKGIFPEPQHDSVIQIANIVTKYGEKKPFVRNVFCLDTTS 357
Query: 354 PIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
PIV ++SF+ E D+L WR+F+ +VDPD++IGYNI FD PYL+++
Sbjct: 358 PIVATQILSFDREEDMLREWRNFLEQVDPDIIIGYNIANFDFPYLLDR 405
>gi|342874671|gb|EGU76649.1| hypothetical protein FOXB_12838 [Fusarium oxysporum Fo5176]
Length = 1054
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/621 (62%), Positives = 496/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 430 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 489
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA ++ LVIPN+K S++ YEGATV+E G+Y+ PIATLD
Sbjct: 490 FLLSRGQQVKFISQLFRKALEQKLVIPNLKSEASDE-QYEGATVIEPTRGYYDVPIATLD 548
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TLV+ + NL E TP+G+TFV +KG+L +ILE
Sbjct: 549 FASLYPSIMQAHNLCYTTLVSKKAIEAFNLKKDEDYIVTPNGDTFVTIKQRKGLLAQILE 608
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARK+AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS T
Sbjct: 609 ELLAARKQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLEIASSTT 668
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GR+MIE TK+ VE+++ GY H+A+VIYGDTDSVM++FG ++ AMKLG EA+ Y
Sbjct: 669 SFGRKMIEKTKEEVENRYNIANGYSHDAQVIYGDTDSVMIKFGTKDLQEAMKLGEEASKY 728
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 729 VSAKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQT 788
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+D+D+ GA +YVK TI+DLL N++D+S LVITK LTK DDY K AHVE
Sbjct: 789 VIEKVLRMILIDQDVQGAQEYVKETIADLLQNKVDMSKLVITKALTK--DDYAAKQAHVE 846
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV+++ GAK +E+SEDPIYVLE+N+PIDT YYL+NQ+
Sbjct: 847 LAQRMKKRDAGSAPGLGDRVAYVMVRGPAGAKNFEKSEDPIYVLEHNVPIDTRYYLDNQL 906
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + ++ LL+GDHTR+IS++ P+ G+MKFAK+ +C+GCK +
Sbjct: 907 AKPLGRIFEPILGETKARSLLTGDHTRTISVAAPTVGGLMKFAKKTQTCMGCKKPLTGKE 966
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
S G +CS+C R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 967 ESQGAVCSNCAPRVGELYKKTLDRVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1026
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A +L R++
Sbjct: 1027 YMRMKAKKDLEDAGRELSRFD 1047
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 161/329 (48%), Gaps = 67/329 (20%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W RPP+ +V + S+ FQ ++ + G A +++FGV G+SV
Sbjct: 91 WDRPPVVD-FVPERDSLCFQSIEAEE----------GTLHGGRATVKLFGVNEAGNSVML 139
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V F+ Y Y+ P P D + F LE ++ + + + + +I +
Sbjct: 140 HVTDFKHYLYVPAPVNFQPQDCAAFKAYLETQVAQHQPT------IHSVAFAMRENIYGF 193
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIV 254
Q +S+P+LK+ RG+
Sbjct: 194 QGNQSKPYLKV----------------RGM------------------------------ 207
Query: 255 GGNWIEVPVGKYRKTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECA 312
+W+E P Y+ + S CQ+E + Y D+++ P GE+SKMAP RILSFDIECA
Sbjct: 208 --SWVEAPAKAYKIIPDHVRQSNCQIEAEVSYLDLVAHEPVGEWSKMAPLRILSFDIECA 265
Query: 313 GRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLA 372
GRKG FPE HDPVIQ+AN+VT GEK+PFIRNV L+ + IV ++ +E E +L
Sbjct: 266 GRKGIFPEANHDPVIQIANIVTQYGEKKPFIRNVFCLQETSSIVATQILEYEKEEKMLSD 325
Query: 373 WRDFIREVDPDVMIGYNICKFDLPYLIEK 401
W+ F+ DPD++ GYNI FD PYL+++
Sbjct: 326 WQKFLIRADPDIITGYNISNFDFPYLLDR 354
>gi|324120682|dbj|BAJ78732.1| DNA polymerase delta catalytic subunit [Metriocampa sp. 44]
Length = 1115
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/617 (65%), Positives = 483/617 (78%), Gaps = 9/617 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDL GNA+TRRRLAVYCLKDAYLP RLLDKLM I NY+EMARVTGVP+S
Sbjct: 499 QKEDVHHSIISDLHYGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVPLS 558
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ +KV+SQ+LRKA+++ LV+P + S++ +EGATV+E G+Y+ PIATLD
Sbjct: 559 FLLTRGQQVKVMSQILRKAREQKLVVPTYQSRASDE-QFEGATVIEPNKGYYDVPIATLD 617
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P + L E +TPSG FVKS L+KG+LPEILE
Sbjct: 618 FSSLYPSIMMAHNLCYTTLLAPGSEKTLG--AEDFVRTPSGNLFVKSTLRKGLLPEILEN 675
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AK +LK KDP VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 676 LLAARKKAKEELKNEKDPFRCKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTA 735
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MIE TKK VE +++T G E +A+VIYGDTDSVMV+FGV TV AMKLG+EAA+++
Sbjct: 736 FGRTMIELTKKEVEARYSTSQGAEQDAKVIYGDTDSVMVRFGVQTVAEAMKLGKEAAEFV 795
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FI PIKLEFEKVY+PYLLI+KKRYAGLY+T PE DKMD KGIETVRRDNC LV L
Sbjct: 796 STKFIPPIKLEFEKVYFPYLLINKKRYAGLYFTRPEIHDKMDCKGIETVRRDNCPLVAKL 855
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
++ CL KILVDRD GA Q+ + ISDLL NR+D+S LVITK LTKT +Y K AHVEL
Sbjct: 856 ISTCLQKILVDRDPQGAKQHAQQVISDLLCNRVDISQLVITKELTKTDKEYTAKQAHVEL 915
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +MRKRDA TAP +GDRVPY+I A KG AY+++EDPIYVLENNIPID+ YYLENQ++
Sbjct: 916 AHKMRKRDAGTAPKLGDRVPYIIAMAVKGTPAYQKAEDPIYVLENNIPIDSLYYLENQLA 975
Query: 880 KPLLRIFEPIL--KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--SN 935
KPLLRIFEPIL A ELL GDHTR+ + T + F +R+ +CIGC+A++ N
Sbjct: 976 KPLLRIFEPILGESKAESELLRGDHTRTKIVVTSKVGAMAAFTRRRAACIGCRAILKDEN 1035
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
C+HC E E+Y + V+ ++ L+ F RLWTQCQ CQGSLH+DVLCTSRDCPIFY R
Sbjct: 1036 DACCAHCA--EGEVYQREVAGMRTLQERFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMR 1093
Query: 996 KKAQKDMAEAKLQLDRW 1012
KK QKD+ E L R+
Sbjct: 1094 KKVQKDLDEQDRTLRRF 1110
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 148/347 (42%), Positives = 218/347 (62%), Gaps = 24/347 (6%)
Query: 73 AKWAR--PPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGH 130
AKW+R PP I+FQQ+D+D IG + + G+ AI+R+FGVT+ G+
Sbjct: 83 AKWSRSDPP---DLNPDEDFILFQQMDVDNYIGFPMKGMPGPQVGNVAIMRLFGVTKAGN 139
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC VHGF PYFY++ P I F L M R+++ +P+ + +E++ +
Sbjct: 140 SVCCHVHGFTPYFYVTVPDDFNKGHIHEFKDTLNKAMLADMRSTRESIPEPILSLELMDR 199
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK----SFMTYESNVLFA 244
SI Y +++ FL + VALP +VAS + +L++G DG+ + SF YE+N+ F
Sbjct: 200 ESIFGYHGNQTRKFLCVTVALPRLVASGKRLLEKG---DGVPSQFRSHSFKPYEANIDFE 256
Query: 245 LRFMIDCNIVGGNWIEVPVGKYRKTA----------KTLSYCQLEFDCLYSDIISRHPEG 294
RFM+D ++VG +W+ +P Y+ + K++S CQ+E D Y +I P+G
Sbjct: 257 TRFMVDMSLVGCSWVRLPPKTYQVRSQNPPLNSTIHKSVSRCQIEVDIAYDKLICYAPDG 316
Query: 295 EFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP 354
E++++AP RILSFDIECAGRKG FPE HDPVIQ+A++V +QG+ +P IR V TL +CAP
Sbjct: 317 EWAEIAPLRILSFDIECAGRKGIFPEAEHDPVIQIASMVQIQGQLEPMIRTVFTLDTCAP 376
Query: 355 IVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
IVG V SF++E +L +W F+R+VDPD++ GYNI FDLPYL+ +
Sbjct: 377 IVGALVKSFDSEVQLLESWASFVRQVDPDLLTGYNINNFDLPYLLNR 423
>gi|432868483|ref|XP_004071560.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Oryzias
latipes]
Length = 1107
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/619 (66%), Positives = 492/619 (79%), Gaps = 6/619 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSIISDLQNGN +TRRRLAVYCLKDAYLP RLL KLM + NY+EMARVTGVP+S
Sbjct: 491 QKEDVQHSIISDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLS 550
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQLLR+A ++NLV+P VK G E Y GATV+E G+Y PI TLD
Sbjct: 551 YLLSRGQQIKVVSQLLRQAMKQNLVMPVVKTEGGED--YTGATVIEPEKGYYSVPITTLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ +L L E KTP+G+ FVKS+++KG+LPEILE
Sbjct: 609 FSSLYPSIMMAHNLCYTTLLQKGSVERLQLSSEDFIKTPTGDQFVKSSVRKGLLPEILEN 668
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+LK+ DP +K VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 669 LLSARKRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTG 728
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ +A+VIYGDTDSVMV+ GV TV+ AM++GREAA+++
Sbjct: 729 FGRQMIERTKQLVESKYTISNGYQADAKVIYGDTDSVMVKLGVATVKEAMEIGREAAEWV 788
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKN 758
S F PIKLEFEKVYYPYLLI+KKRYAGLY+ ++ + DKMD KGIETVRRDNC LV N
Sbjct: 789 SSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSSADTHDKMDCKGIETVRRDNCPLVAN 848
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL KIL+DRD GAV + K ISDLL NR+D+S LVITK LT+T +Y K AHVE
Sbjct: 849 LINTCLQKILIDRDPQGAVDHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGKQAHVE 908
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +APN+GDRVPYVIIKAAKGA AY +SEDPIYVLEN IPIDT YYLE Q+
Sbjct: 909 LAERMRKRDAGSAPNLGDRVPYVIIKAAKGAAAYMKSEDPIYVLENTIPIDTQYYLEQQL 968
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-SN 935
SKPLLRIFEPIL + E LL GDHTR ++ T G+M FA+++ +CIGCKA++ ++
Sbjct: 969 SKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCKAVLKTD 1028
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C CK +E+ELY K + + LE F RLWTQCQ CQGSLH+DVLCTSRDCPIFY R
Sbjct: 1029 EAVCDFCKKKESELYQKEIFHLNTLEERFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMR 1088
Query: 996 KKAQKDMAEAKLQLDRWNF 1014
KK QKD+ + + R+ +
Sbjct: 1089 KKVQKDLDDQSKLVSRFGW 1107
Score = 293 bits (749), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 214/344 (62%), Gaps = 17/344 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+W RP + S ++++FQQ+D+D+ +G S + IIR+FGVT G+SVC
Sbjct: 73 RWPRPHAPTLNPSS-ETLVFQQIDLDHYLGASVAGMPGQLQEKVPIIRMFGVTDNGNSVC 131
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C VHGF PYFY+ P G + + F + L + + R++K + V +++ +K ++
Sbjct: 132 CHVHGFAPYFYVPAPNGFKSEFLGEFKRELNSAVLKDMRSNKDNISVTVLAVDITRKENM 191
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y Q+S FL+I +A+P ++A + +L++G + ++ + ++E+N+ F +RFM+D
Sbjct: 192 YGYHGQQSMDFLRITMAMPRLIAPAKRLLEQGFKFGHFPIQGYQSFEANIDFEIRFMVDS 251
Query: 252 NIVGGNWIEVPVGKYR--------------KTAKTLSYCQLEFDCLYSDIISRHPEGEFS 297
N+VG WIE+P K+R +T +S CQ E D ++D+IS EGE+
Sbjct: 252 NVVGCCWIELPKDKWRLREERSTSTGEVDSQTPVKVSLCQYEVDVAWTDLISHPAEGEWQ 311
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
++AP R+LSFDIECAGRKG FPEP DPVIQ+A++V QGE +PFIR V TL+SC IVG
Sbjct: 312 RIAPLRVLSFDIECAGRKGIFPEPDKDPVIQIASMVQRQGETEPFIRTVFTLQSCTSIVG 371
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++ F E+ +L +W +F+R VDPD++ GYNI FD PYLI +
Sbjct: 372 SQILCFTQEKQLLQSWAEFLRTVDPDIITGYNIQNFDFPYLINR 415
>gi|327276010|ref|XP_003222764.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Anolis
carolinensis]
Length = 1100
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/618 (63%), Positives = 490/618 (79%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNG ++RRRLAVYCLKDAYLP RLL+KLM + NY+EMARVTGVP+S
Sbjct: 481 QKEDVQHSIITDLQNGTEQSRRRLAVYCLKDAYLPLRLLEKLMCVINYMEMARVTGVPLS 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQLLR+A ++NLV+P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 541 YLLARGQQIKVVSQLLRQAVKQNLVMPVVKSEGGED--YAGATVIEPLKGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + L + +TP+G+ FVK++++KG+LPEILE
Sbjct: 599 FSSLYPSIMMAHNLCYTTLLQQGAVERHGLSADKFIRTPTGDHFVKASVRKGLLPEILEN 658
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRAK +LK+ DP ++ VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 659 LLAARKRAKTELKQETDPFKRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 718
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM + GVP+V AM++GREAA ++
Sbjct: 719 FGRQMIEKTKQLVESKYTIANGYSADAKVVYGDTDSVMCRLGVPSVAEAMEIGREAAAWV 778
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKN 758
S FI PIKLEFEKVY+PYLLI+KKRYAGLY+ +NP+ DKMD KGIETVRRDNC LV N
Sbjct: 779 SSHFIPPIKLEFEKVYFPYLLINKKRYAGLYFSSNPDTHDKMDCKGIETVRRDNCPLVAN 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL K+L+DRD GAV + K ISDLL NR+D+S LVITK LT+T D+Y + AHVE
Sbjct: 839 LINTCLQKLLIDRDPAGAVAHAKEVISDLLCNRVDISQLVITKELTRTADEYAGRQAHVE 898
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMR+RD +APN+GDRVPYVII AAKG AY +SEDPIYVLENN+PIDT YYLE Q+
Sbjct: 899 LAERMRRRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPIYVLENNLPIDTQYYLEQQL 958
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS-N 935
+KPLLRIFEPIL + LL G+HTR ++ T G+M FA ++ +CIGC+A+++ +
Sbjct: 959 AKPLLRIFEPILGEGKAQNILLKGEHTRCKTVLTAKVGGLMAFATKRSTCIGCRAVLNHH 1018
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C R++ELY K V+ + LE F RLWTQCQ CQGSLH+DVLCTSRDCPIFY R
Sbjct: 1019 GAVCKFCLSRQSELYQKEVTYLSSLEEKFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMR 1078
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK QKD+ + ++ + R+
Sbjct: 1079 KKVQKDLDDQEVLISRFG 1096
Score = 328 bits (841), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 165/384 (42%), Positives = 237/384 (61%), Gaps = 20/384 (5%)
Query: 37 EFLDEDVFLDET----LLPEDEESLILRDIEQRQDFAS-RLAKWARPPLSSGYVSQCQSI 91
+F +E FLDE L E L+ DI F+S R KW RPP + ++
Sbjct: 23 QFEEELAFLDEVESEMALEAKETQLVPDDIPLGNLFSSVRNPKWQRPPPPEINPKE-DAL 81
Query: 92 MFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGM 151
FQQ+++DY +G + G ++R+FGVT G+S+CC +HGF PYFY+ G
Sbjct: 82 CFQQVELDYYVGTHIPGFPGSTQGPVPVLRMFGVTEAGNSLCCHIHGFAPYFYVPAQTGF 141
Query: 152 GPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVAL 209
D ++ F + L + R++K + Q V +E+ K+++ Y + PFLKI +A+
Sbjct: 142 KADHLAEFQRELNAAVLRDMRSNKDNLSQVVLAVEICNKQNMYGYHGENFIPFLKITMAM 201
Query: 210 PTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR-- 267
P ++A + +L++G++ LG+ ++ +E+N+ F +RFM+D ++VG NWIE+P GKYR
Sbjct: 202 PRLIAPAKRLLEQGLRCGTLGVHNYQAFEANIDFEIRFMVDRDVVGCNWIELPAGKYRLR 261
Query: 268 ----------KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH 317
+ +S CQLE D + D IS PEGE+ ++AP R+LSFDIECAGRKG
Sbjct: 262 QEQSAGESSKENPPKVSLCQLEADVAWMDFISYPPEGEWQRIAPLRVLSFDIECAGRKGI 321
Query: 318 FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFI 377
FPEP DPVIQ+AN+V QGEK PF+RNV TL+SCAPIVG V+ F+ E ++L AW +FI
Sbjct: 322 FPEPEKDPVIQIANMVQRQGEKDPFVRNVFTLQSCAPIVGSQVLCFQKEGELLKAWAEFI 381
Query: 378 REVDPDVMIGYNICKFDLPYLIEK 401
R VDPD++ GYNI FDLPYLI +
Sbjct: 382 RTVDPDIITGYNIQNFDLPYLINR 405
>gi|324120684|dbj|BAJ78733.1| DNA polymerase delta catalytic subunit [Lepidocampa weberi]
Length = 1096
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/617 (64%), Positives = 487/617 (78%), Gaps = 9/617 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDL +GNA+TRRRLA+YCLKDAYLP RLLDKLM I NY+EMARVTGVP+S
Sbjct: 480 QKEDVHHSIISDLHHGNAQTRRRLAIYCLKDAYLPLRLLDKLMCIINYMEMARVTGVPLS 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ +KV+SQ+LRKAK +NL++P + GS++ +EGATV+E G+Y PIATLD
Sbjct: 540 SLLTRGQQVKVMSQILRKAKTQNLIVPTYQSKGSDE-QFEGATVIEPVKGYYNVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TLV P + LN P +TPSG FVKS L+KG+LP+ILE
Sbjct: 599 FSSLYPSIMMAHNLCYTTLVRPGLDKNLN--PTDYIRTPSGNLFVKSALRKGLLPDILEN 656
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AK DLK+ DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 657 LLSARKKAKDDLKKETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTA 716
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MIE TKK VE+++ G EH+A+VIYGDTDSVMV+FGV TV+ AM LG+EAA+Y+
Sbjct: 717 FGRTMIEFTKKEVEERYNRSQGAEHDAQVIYGDTDSVMVKFGVQTVKEAMALGKEAAEYV 776
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F++PI+LEFEKVY+PYLLI+KKRYAGLY+T PE DKMD KGIETVRRDNC LV L
Sbjct: 777 SAKFVQPIRLEFEKVYFPYLLINKKRYAGLYFTRPEIHDKMDCKGIETVRRDNCPLVAKL 836
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T CL KIL+DRD GA + + ISDLL NR+D+S LVITK LTKT +Y K AHVEL
Sbjct: 837 ITTCLEKILIDRDPNGAKTHAQQVISDLLCNRVDISQLVITKELTKTDKEYAAKQAHVEL 896
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +MRKRDA TAP +GDRVPYVI+ A KG AY+++EDPIYVLENNIPID YYLENQ++
Sbjct: 897 ANKMRKRDAGTAPKLGDRVPYVIVNATKGTPAYQKAEDPIYVLENNIPIDCVYYLENQLA 956
Query: 880 KPLLRIFEPIL--KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
KPLLRIFEPIL A ELL GDHTR+ + T + F +R+ +CIGCKA++ +
Sbjct: 957 KPLLRIFEPILGESKAESELLRGDHTRTKIVVTSKVGAMAAFTRRRAACIGCKAMLKDER 1016
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C HCK E E+Y + ++ ++ L+ F RLWTQCQ CQGSLH+DVLCTSRDCPIFY R
Sbjct: 1017 DAVCPHCK--EGEVYQREIASMRVLQERFCRLWTQCQRCQGSLHEDVLCTSRDCPIFYMR 1074
Query: 996 KKAQKDMAEAKLQLDRW 1012
KK QKD+ E + R+
Sbjct: 1075 KKVQKDLDEQDRVIQRF 1091
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/415 (40%), Positives = 242/415 (58%), Gaps = 25/415 (6%)
Query: 1 MNRSNGSARKRPPPTPKESWPNKQQATTPTTPVIDDEFLDEDVF-LDETLLPEDEESLIL 59
MNR G+ K+P P ++ + F E+ F ETL D +S
Sbjct: 1 MNRKRGNFGKKP------DGPGAKRQHAEDDDDLSYVFSSENDFDSQETLEEMDIDSQET 54
Query: 60 RDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAI 119
D E+ D AKW+R P + + + +++FQ++DID G R + L GS I
Sbjct: 55 LD-EEAPDLEHSTAKWSRDPCPN-FDPKEDNLLFQEMDIDVYTGFPMRGMPGLKVGSVPI 112
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VP 177
+R++GVT++G+S+CC VHGF PYFY+ P I F L M R K +P
Sbjct: 113 VRLYGVTKQGNSICCHVHGFTPYFYVLLPDNFDNTHIPDFKDCLNRAMLNDLRRGKDDIP 172
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS---- 233
+ + +E+ K+SIMYYQ FL+I VALP ++A + +L++G DG+ +
Sbjct: 173 EPIISMEICDKQSIMYYQGSSVAKFLRIKVALPRLIAGTKRLLEKG---DGVPQQFRQHI 229
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRK-------TAKTLSYCQLEFDCLYSD 286
F +E+N+ F RFM+D ++VG W+E+P +R+ + +S CQLE D +
Sbjct: 230 FRPFEANIDFETRFMVDKDLVGCAWVEIPKKAWRRRTQEGVGDGRCISRCQLEIDVSHER 289
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
+I PE E+S++APFRILSFDIECAGRKG FPE DPVIQ+A+++ +QG+++P IR V
Sbjct: 290 LICYAPEEEWSEIAPFRILSFDIECAGRKGIFPEAEKDPVIQIASMLQIQGQEEPMIRTV 349
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
TL SCAPIVG V SF E+++L W +F+R+VDPD++ GYNI FDLPYL+ +
Sbjct: 350 FTLNSCAPIVGSVVRSFNDEKELLEKWAEFVRQVDPDLITGYNINNFDLPYLLNR 404
>gi|324120698|dbj|BAJ78740.1| DNA polymerase delta catalytic subunit [Mnais pruinosa pruinosa]
Length = 1095
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/610 (64%), Positives = 482/610 (79%), Gaps = 9/610 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN++TRRRLAVYCLKDAYLP RLL+KLM I NY+EMARVTGVP+S
Sbjct: 475 QKEDVQHSIITDLQNGNSQTRRRLAVYCLKDAYLPLRLLEKLMCIINYMEMARVTGVPLS 534
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKAK+K+ VIP G ++ +EGATV+E G+Y PIATLD
Sbjct: 535 CLLTRGQQIKVVSQLLRKAKEKDFVIPTYSGGGQDE-QFEGATVIEPLRGYYSDPIATLD 593
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P KL L PE +TP+G FV+ +++KG+LPEILE
Sbjct: 594 FSSLYPSIMMAHNLCYTTLLQPGSKEKLGLSPEDYVQTPAGNYFVRQSVRKGLLPEILEN 653
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AK DLKE DPL + VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 654 LLSARKKAKDDLKEETDPLRRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 713
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MIE TK+ VE K+ GY H+A VIYGDTDSVMV+FGV ++E AM LGREAA+Y+
Sbjct: 714 FGRTMIEQTKQEVETKYCVARGYSHDAVVIYGDTDSVMVKFGVKSLEEAMALGREAAEYV 773
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F+KPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDNC LV N+
Sbjct: 774 SSKFVKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGIETVRRDNCPLVANM 833
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L++RD GAV Y K I+DLL NR+D+S LV+TK L K DY K AHVEL
Sbjct: 834 MNTCLQKLLIERDPDGAVAYAKQVIADLLCNRIDISQLVVTKELAK--QDYAAKQAHVEL 891
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +MRKRD A AP +GDRVPYV+I AAKG AY ++EDPIYVLENNIPID++YYLENQ+S
Sbjct: 892 AIKMRKRDPAAAPKLGDRVPYVLIAAAKGTPAYMKAEDPIYVLENNIPIDSNYYLENQLS 951
Query: 880 KPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
KPLLRIF PIL + E LL GDHTR+ ++ T + F +++ +C+GCKA++
Sbjct: 952 KPLLRIFSPILGDNKAESVLLRGDHTRTKAVVTSKVGALSAFTQKRETCLGCKAVLPKES 1011
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G +C+HC R+ E+Y + ++Q LE F RLWTQCQ CQGSLH++VLCTSRDCPIFY
Sbjct: 1012 PTGPVCTHCVSRKPEIYMAELERMQALEERFSRLWTQCQRCQGSLHEEVLCTSRDCPIFY 1071
Query: 994 RRKKAQKDMA 1003
RKK Q D+A
Sbjct: 1072 MRKKVQMDLA 1081
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 216/337 (64%), Gaps = 12/337 (3%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW+RP L + +++FQQ+DID+ G + + G I+R++GVT EGHSVC
Sbjct: 66 KWSRPALPPLNPRE-DALIFQQIDIDHYSGQPFKGMPGAQIGPVPIMRMYGVTMEGHSVC 124
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILE----GRMREANRNSKVPQFVRHIEMVQKR 189
C VHGF PYF++ P D F + L MR NR++ V + V +E+ K
Sbjct: 125 CHVHGFSPYFFVLLPDSFNEDHCGPFKEALNKAIIADMR-GNRDN-VTEAVLAVEIQMKE 182
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
+I Y+ K FLK+ +ALP ++ + + +L++ + LG+ + +ESN+ F +RFM+
Sbjct: 183 NIFGYRGAKKVHFLKVTLALPKLIPAAKRLLEKEVIYGALGVHPYQAFESNIDFDIRFMV 242
Query: 250 DCNIVGGNWIEVPVGKYRKTAKTL-----SYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
D +VG +W+E+P K+ +K L S CQLE D + +++S PEGE++K+APFRI
Sbjct: 243 DTGLVGCSWVELPADKWSIRSKGLPPLAQSRCQLEVDVSWEEMVSHPPEGEWAKVAPFRI 302
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LS+DIECAGRKG FPEP DPVIQ+AN+V QG+ FIRNV TL +CAPI+G V+S++
Sbjct: 303 LSYDIECAGRKGIFPEPNQDPVIQIANMVVRQGQTDAFIRNVFTLNTCAPIIGCQVLSYK 362
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
ER++L W DF+REVDPD+ GYNI FDLPYL+ +
Sbjct: 363 DEREMLEKWADFVREVDPDIFTGYNINNFDLPYLLNR 399
>gi|225555953|gb|EEH04243.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus
G186AR]
Length = 1111
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/623 (63%), Positives = 499/623 (80%), Gaps = 14/623 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG+ ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 488 QKEDVHHTMITELFNGSPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 547
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
FLLSRGQ +K +SQL RKA ++ LVIPN++ ++ SEQ YEGATV+E FY+ PIATL
Sbjct: 548 FLLSRGQQVKFISQLFRKALEQQLVIPNLRNESTSEQ--YEGATVIEPIRDFYDVPIATL 605
Query: 519 DFASLYPSIMMAYNLCYSTLVTPE--DARKLNLPPECVNKTPSGETFVKSNLQKGILPEI 576
DFASLYPSI+ A+NLCY+TL+ DA ++ + + TP+G+ F S ++KG+L +I
Sbjct: 606 DFASLYPSIIQAHNLCYTTLLKKSTIDAHQMKEGEDYI-VTPNGDRFCTSKVRKGLLTQI 664
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
LEELL ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS
Sbjct: 665 LEELLGARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASS 724
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
TSYGRQMIE TK+ VE K+T GY H+A+V+YGDTDSVMV+FG+ + AMKLG+EAA
Sbjct: 725 TTSYGRQMIEKTKEEVEAKYTIANGYSHDAKVVYGDTDSVMVKFGMKDLAEAMKLGQEAA 784
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
DY+S FI PIKLEFEKVY+PYLLI+KKRYAGLYWT P+K+DKMDTKGIETVRRDNC +V
Sbjct: 785 DYVSSKFINPIKLEFEKVYFPYLLINKKRYAGLYWTRPDKYDKMDTKGIETVRRDNCRMV 844
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+ ++ L KIL+DRD+ GA YVK TISDLL N++D+S LVITK L+K DY K AH
Sbjct: 845 QTVIETVLRKILIDRDVDGAQSYVKDTISDLLQNKIDMSKLVITKALSKK--DYTAKQAH 902
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELAERM+KRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+N
Sbjct: 903 VELAERMKKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDN 962
Query: 877 QISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-- 933
Q++KPL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKF K+ +C+GCK +
Sbjct: 963 QLAKPLTRIFEPILGEKKAGQLLTGEHTRSISVAAPTLGGLMKFTKKTQTCMGCKKPLTG 1022
Query: 934 ---SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
S+G +C C+ R ELY KT+++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCP
Sbjct: 1023 KEGSDGAVCQDCRPRLGELYTKTLTKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCP 1082
Query: 991 IFYRRKKAQKDMAEAKLQLDRWN 1013
IFY R KA+KD+ +A+ +L R++
Sbjct: 1083 IFYMRMKAKKDVEDAEKELARFD 1105
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 200/348 (57%), Gaps = 29/348 (8%)
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
+++ + + +WARP L + S+ ++ FQQ++ E + G +++FG
Sbjct: 87 KENNSEKDQQWARPSLDNFDASR-DNLCFQQIEA---------EEGTIGGGKQPAVKLFG 136
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT GHSV V F Y Y++ P P D F LE + E + + + ++
Sbjct: 137 VTEAGHSVLLHVTHFLHYLYVAAPVSFAPTDCEGFKAYLEHEI-EIHHPA-----IHSVQ 190
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-------IQLDGLGMKSFMTY 237
MV + ++ +Q + P+LKI V P + R +++ G + D G+ +F
Sbjct: 191 MVMRENLFGFQGNQKSPYLKITVTDPRHINKLRTLIETGKANYRGMWRADADGILTF--- 247
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGE 295
N+ + LRFMID I G +W+E P KY+ + +S CQ+E Y D+I+ +GE
Sbjct: 248 -DNIEYILRFMIDTGISGMSWVEAPASKYQILPMVERMSNCQIEATIHYRDLIAHPNDGE 306
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
++KMAP RILSFDIECAGRKG FPE DPVIQ+AN+VT GE +PFIRNV L +C+ I
Sbjct: 307 WAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESKPFIRNVFVLDTCSLI 366
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
V ++ F+TE +L+AW++F+ EVDPDV+IGYNI FD PYL+++ +
Sbjct: 367 VNTQLLEFDTEEKMLMAWKNFLVEVDPDVIIGYNIANFDFPYLLKRAE 414
>gi|340959854|gb|EGS21035.1| DNA polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1108
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/622 (62%), Positives = 499/622 (80%), Gaps = 10/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L G E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 484 QKEDVHHSMITELFEGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 543
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ +K LSQL RKA ++ LVIPN++ SE+ YEGATV+E G+Y+ PIATLD
Sbjct: 544 FLLARGQQVKFLSQLFRKALEQKLVIPNLRSESSEE-QYEGATVIEPVRGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+MA+NLCY+TL+ +D K NL E TP+G+ FV + +KG+L +ILE
Sbjct: 603 FASLYPSIIMAHNLCYTTLIKKKDVEKWNLKKDEDYIVTPNGDMFVTTKQRKGLLAQILE 662
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARK+AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS T
Sbjct: 663 ELLAARKQAKKELAAETDPFKKAVLNGRQLALKISANSVYGLTGATNGKLPCLEIASSTT 722
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GRQMI TK+ VE ++ GY H+A+VIYGDTDSVMV+FG ++ AMKLG++A++Y
Sbjct: 723 AFGRQMIMKTKEEVEKRYCIANGYSHDAQVIYGDTDSVMVKFGTRDLKEAMKLGQDASEY 782
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT PEKFDK+DTKGIETVRRDNCLLV+
Sbjct: 783 VSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTRPEKFDKVDTKGIETVRRDNCLLVQT 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+D+D+PGA +YVKSTI+DLL N++D+S LVITK LTK +DY K AHVE
Sbjct: 843 VIDKVLRMILIDQDVPGAQEYVKSTIADLLQNKIDMSKLVITKALTK--EDYAAKQAHVE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRD +AP++GDRV YV++K A G+K +ERSEDPIYVLE+N+PIDT YYL+NQ+
Sbjct: 901 LAQRMKKRDPGSAPSLGDRVAYVMVKGATGSKNFERSEDPIYVLEHNVPIDTKYYLDNQL 960
Query: 879 SKPLLRIFEPILKNA-SKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL A ++ LL+GDHTRSIS++ P+ G+MKFAK+ +C+ CK +
Sbjct: 961 AKPLGRIFEPILGEAKARSLLTGDHTRSISVAAPTVGGLMKFAKKTQTCMACKKPLTGKE 1020
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
SNG +C R AELY +T+ +V ELEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1021 ESNGAVCKDDAPRVAELYKRTLDKVSELEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1080
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A +L R+++
Sbjct: 1081 YMRMKAKKDLEDANRELARFDY 1102
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 191/336 (56%), Gaps = 25/336 (7%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W RPP+ + + S+ FQ ++ E L+ G A + ++FGVT +G+SV
Sbjct: 93 WDRPPVPKDWDPEKHSLTFQAIEA---------EEGSLAGGQATV-KLFGVTDKGNSVLL 142
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V F+ Y Y+ P DD F LE +M + + + + +I +
Sbjct: 143 HVRDFKHYLYVQAPVSFTHDDCPLFQAYLEKQM------GMTQPVIHSVTLTMRENIYGF 196
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM-----KSFMTYESNVLFALRFMI 249
Q P+LKI V P + R +++RG + + GM + MTY+ N+ + LRFM+
Sbjct: 197 QGNVQNPYLKITVTDPKFINKVRTMIERG-EANWKGMWKSSDGTIMTYD-NIQYLLRFMV 254
Query: 250 DCNIVGGNWIEVPVGKYRKTA--KTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
D ++ G W+E P GKY + S CQ+E Y D+I+ P GE+SKMAP RILSF
Sbjct: 255 DTSLAGMAWVEAPAGKYTVMTGNEKQSNCQIEAQMSYRDMIAHKPVGEWSKMAPLRILSF 314
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIECAGRKG FPEP HD VIQ+AN+VT GE +PF+RNV L + +PIV ++SF+ E
Sbjct: 315 DIECAGRKGIFPEPQHDAVIQIANIVTTYGENKPFVRNVFCLDTTSPIVATQILSFDKEE 374
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
+L AW++F+ VDPDV+ GYNI FD PYL+++ +
Sbjct: 375 QMLAAWQNFLVRVDPDVITGYNIANFDFPYLLDRAE 410
>gi|302911020|ref|XP_003050401.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731338|gb|EEU44688.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1104
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/621 (62%), Positives = 497/621 (80%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 480 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ IK +SQL RKA ++ LVIPN+K S++ YEGATV+E G+Y+ PIATLD
Sbjct: 540 FLLSRGQQIKFISQLFRKALEQKLVIPNLKSEVSDE-QYEGATVIEPTRGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TLV+ + L E TP+G+TFV +KG+L +ILE
Sbjct: 599 FASLYPSIMQAHNLCYTTLVSKKAIEAFGLQKDEDYIVTPNGDTFVTVKQRKGLLAQILE 658
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARK+AK +L KDP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS T
Sbjct: 659 ELLAARKQAKRELAVEKDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLEIASSTT 718
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GR+MIE TK+ VE+++ GY H+A+VIYGDTDSVM++FG ++ AMKLG EA+ Y
Sbjct: 719 SFGRKMIEKTKEEVENRYNIANGYSHDAQVIYGDTDSVMIKFGTKDLKEAMKLGEEASKY 778
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 779 VSDKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQT 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+D+D+ GA +YVK TI+DLL N++D+S LVITK LTK DDY K AHVE
Sbjct: 839 VIEKVLRMILIDQDVQGAQEYVKETIADLLQNKVDMSKLVITKALTK--DDYAAKQAHVE 896
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV+++ A GAK +E+SEDPIYVLE+N+PIDT YYL+NQ+
Sbjct: 897 LAQRMKKRDAGSAPGLGDRVAYVMVRGAAGAKNFEKSEDPIYVLEHNVPIDTRYYLDNQL 956
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS--- 934
+KPL RIFEPIL + ++ LL+GDHTR+IS++ P+ G+MKFAK+ +C+GCK ++
Sbjct: 957 AKPLGRIFEPILGETKARSLLTGDHTRTISVAAPTVGGLMKFAKKTQTCMGCKKPLTGKE 1016
Query: 935 --NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +CS+C R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1017 EAQGAVCSNCAPRVGELYNKTLDRVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1076
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A +L R++
Sbjct: 1077 YMRMKAKKDLEDAGRELSRFD 1097
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/361 (34%), Positives = 192/361 (53%), Gaps = 36/361 (9%)
Query: 55 ESLILRDIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
ES +L + Q +++ + W RPP+ + + S+ FQ ++ +
Sbjct: 66 ESEVLEKLSQDLSDRKKNNTEKDQAWERPPVVD-FEPERDSLCFQSIEAEE--------- 115
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
G A +++FGV G+SV V F+ Y Y+ P P D + F LE ++ +
Sbjct: 116 -GTLHGGRATVKLFGVNEAGNSVMLHVTDFKHYLYVPAPVNFQPQDCAAFKAYLETQVAQ 174
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG------ 223
+ + + SI +Q +S+P+LK+ V P + R + G
Sbjct: 175 HQPT------IHSVAFAMRESIYGFQGNQSKPYLKVTVTDPKFINKVRSTIQHGNANWKR 228
Query: 224 -IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL--SYCQLEF 280
+ DG T++ N+ + LRFM+DC + G +W+E P ++ + L S CQ+E
Sbjct: 229 MWKNDG----EIQTFD-NIQYVLRFMVDCKVRGMSWVEAPAKTFQLLPENLRQSNCQIEA 283
Query: 281 DCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQ 340
+ Y D+I+ P GE+SKMAP RILSFDIECAGRKG FPE HDPVIQ+AN+VT GEK+
Sbjct: 284 EVSYLDLIAHEPVGEWSKMAPLRILSFDIECAGRKGIFPEAQHDPVIQIANIVTKYGEKK 343
Query: 341 PFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIE 400
PF+RNV L+ + IV ++ FE E +L W+ F+ DPD++ GYNI FD PYL++
Sbjct: 344 PFVRNVFCLQETSSIVATQILEFEKEEKMLSEWQKFLITTDPDIITGYNISNFDFPYLLD 403
Query: 401 K 401
+
Sbjct: 404 R 404
>gi|46125595|ref|XP_387351.1| hypothetical protein FG07175.1 [Gibberella zeae PH-1]
Length = 1104
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/621 (62%), Positives = 495/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 480 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA ++ LVIPN+K S++ YEGATV+E G+Y+ PIATLD
Sbjct: 540 FLLSRGQQVKFISQLFRKALEQKLVIPNLKSEASDE-QYEGATVIEPTRGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TLV+ + NL E TP+G+TFV +KG+L +ILE
Sbjct: 599 FASLYPSIMQAHNLCYTTLVSKKAIEAFNLQKDEDYIVTPNGDTFVTIKQRKGLLAQILE 658
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARK+AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS T
Sbjct: 659 ELLSARKQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLEIASSTT 718
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GR+MIE TK+ VE ++ GY H+A+VIYGDTDSVM++FG ++ AMKLG EA+ Y
Sbjct: 719 SFGRKMIEKTKEEVEGRYNIANGYSHDAQVIYGDTDSVMIKFGTKDLQEAMKLGEEASKY 778
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 779 VSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQT 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+D+D+PGA +YVK TI+DLL N++D+S LVITK LTK DDY K AHVE
Sbjct: 839 VIEKVLRMILIDQDVPGAQEYVKETIADLLQNKVDMSKLVITKALTK--DDYAAKQAHVE 896
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV+I+ GAK +E+SEDPIYVLE+N+PIDT YYL+NQ+
Sbjct: 897 LAQRMKKRDAGSAPGLGDRVAYVMIRGPAGAKNFEKSEDPIYVLEHNVPIDTRYYLDNQL 956
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + ++ LL+GDHTR IS++ P+ G+MKFAK+ +C+GCK +
Sbjct: 957 AKPLGRIFEPILGETKARSLLTGDHTRVISVAAPTVGGLMKFAKKTQTCMGCKKPLTGKE 1016
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
S G +CS+C R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1017 ESEGAVCSNCAPRVGELYKKTLDRVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1076
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A +L R++
Sbjct: 1077 YMRMKAKKDLEDAGRELTRFD 1097
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 194/358 (54%), Gaps = 30/358 (8%)
Query: 55 ESLILRDIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
ES +L + Q +++ + W RPP+ +V + S+ FQ ++ +
Sbjct: 66 ESEVLEKLSQDLSDRKRNSTEKDQAWDRPPVVD-FVPERDSLCFQSIEAEE--------- 115
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
G A +++FGV G+SV V F+ Y Y+ P P D + F LE ++ +
Sbjct: 116 -GTLHGGRATVKLFGVNEAGNSVMLHVTDFKHYLYVPAPVNFQPQDCAAFKAYLETQVAQ 174
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL 229
+ + + + +I +Q +S+P+LK+ V P + R + G +
Sbjct: 175 HQPS------IHSVAFAMRENIYGFQGNQSKPYLKVTVTDPKFINRVRTTIQSG-NANWK 227
Query: 230 GM----KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL--SYCQLEFDCL 283
GM T++ N+ + LRFM+DC + G +W+E P Y+ + S CQ+E +
Sbjct: 228 GMWRNDGEVQTFD-NLQYLLRFMVDCKVRGMSWVEAPAKTYKLVNDHIRQSNCQIEAEVS 286
Query: 284 YSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFI 343
Y D+I+ P GE+SKMAP RILSFDIECAGRKG FPE HDPVIQ+AN+VT GEK+PF+
Sbjct: 287 YLDLIAHEPVGEWSKMAPLRILSFDIECAGRKGIFPEANHDPVIQIANIVTKYGEKKPFV 346
Query: 344 RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
RNV L+ + IV ++++E E +L W+ F+ DPD++ GYNI FD PYL+++
Sbjct: 347 RNVFCLQETSSIVATQILAYEKEEKMLSDWQKFLIRTDPDIITGYNISNFDFPYLLDR 404
>gi|340522830|gb|EGR53063.1| DNA polymerase delta, catalytic subunit [Trichoderma reesei QM6a]
Length = 1105
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/621 (62%), Positives = 493/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 481 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ IK +SQL RKA ++ LVIPN+ GSE YEGATV+E G+Y+ PIATLD
Sbjct: 541 FLLSRGQQIKFVSQLFRKALEQKLVIPNIAPQGSED-QYEGATVIEPTRGYYDVPIATLD 599
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ P D + L E TP+G+ FV + +KG+L +ILE
Sbjct: 600 FASLYPSIIQAHNLCYTTLLRPGDVERFKLKKDEDYIVTPNGDMFVTATKRKGLLAQILE 659
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARK+AK +L + DP +KAVL+GRQLALK+SANSVYG TGAT G+LPC+ I+SS T
Sbjct: 660 ELLSARKQAKRELAQETDPFKKAVLNGRQLALKVSANSVYGLTGATTGKLPCLAIASSTT 719
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMIE TK+ VE+K+T GY H+A+VIYGDTDSVMV+FG + AMKLG EA+ Y
Sbjct: 720 SFGRQMIEKTKREVEEKYTIANGYTHDAQVIYGDTDSVMVKFGTKDLAEAMKLGEEASKY 779
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT EK+DKMDTKG+ETVRRDNCLL +
Sbjct: 780 VSAKFLKPIKLEFEKVYFPYLLINKKRYAGLYWTRTEKYDKMDTKGLETVRRDNCLLAQT 839
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+DRD+ GA YVKSTI+DLL N++D+S LVITK LTK +DY K AHVE
Sbjct: 840 VIEKVLRMILIDRDVQGAQDYVKSTIADLLQNKIDMSKLVITKALTK--EDYAAKQAHVE 897
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV+++ A GAK +E+SEDPIYVLENN+PIDT YYL+NQ+
Sbjct: 898 LAQRMKKRDAGSAPGLGDRVAYVMVRGAAGAKNFEKSEDPIYVLENNVPIDTKYYLDNQL 957
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + +K LL+GDHTR+IS++ P+ G+MKFAK+ +C+GCK +
Sbjct: 958 AKPLGRIFEPILGETKAKSLLTGDHTRTISVAAPTVGGLMKFAKKTQTCMGCKKPLTGRD 1017
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
S G +CS C R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1018 ESAGAVCSDCAPRVGELYNKTLDRVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1077
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A +L R++
Sbjct: 1078 YMRMKAKKDLEDAGKELSRFD 1098
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 220/405 (54%), Gaps = 53/405 (13%)
Query: 12 PPPTPK----ESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDI-EQRQ 66
P P P+ + P + + T V + E L++ + +DI E++Q
Sbjct: 39 PVPIPRFISSQKGPGAKLGASQTKSVFESEILEK----------------LSQDISERKQ 82
Query: 67 DFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVT 126
+ + W RPP++ +V SI FQ ++ E L+ G A+ ++FGVT
Sbjct: 83 NNTEKDQAWDRPPVTE-FVPGRDSICFQSIEA---------EEGTLNGGKVAV-KLFGVT 131
Query: 127 REGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMV 186
EG+SV V F+ Y Y++ P P D + + LE ++ + + + +
Sbjct: 132 DEGYSVMLHVTDFKHYLYVAAPMSFQPKDCALYKAYLETQVAQHQ------PAIHSVSLT 185
Query: 187 QKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQ--------LDGLGMKSFMTYE 238
K I +YQ P+LKI V P + + R +++G+ LDG G++++
Sbjct: 186 MKEDIYHYQGNVQSPYLKITVTDPKFINTVRSTIEKGLANWKGMWGPLDG-GLRTY---- 240
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK--TLSYCQLEFDCLYSDIISRHPEGEF 296
N+ + LRFM+DC I G +W+E P G Y+ + S CQ+E + Y D+I+ PEGE+
Sbjct: 241 DNIQYVLRFMVDCKIQGMSWVEAPAGTYKMIPEHSKQSNCQIEAEVSYVDLIAHKPEGEW 300
Query: 297 SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
+KMAP RILSFDIECAGRKG FPE DPVIQ+AN+VT GEK+PFIRNV L + +PIV
Sbjct: 301 AKMAPLRILSFDIECAGRKGIFPEANVDPVIQIANVVTKYGEKKPFIRNVFCLDTTSPIV 360
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++ FE E +L W+ F+ VDPD++IGYNI FD PYL+++
Sbjct: 361 ATQILDFEKEEQMLHEWQQFLIRVDPDIIIGYNISNFDFPYLLDR 405
>gi|324120692|dbj|BAJ78737.1| DNA polymerase delta catalytic subunit [Thermobia domestica]
Length = 1097
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/617 (63%), Positives = 491/617 (79%), Gaps = 7/617 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+ISDLQ+GN++TRRRLAVYCLKDAYLP RL+DKLM + NY+EMARVTGVP+S
Sbjct: 479 QKEDVHHSVISDLQHGNSQTRRRLAVYCLKDAYLPLRLMDKLMCLINYMEMARVTGVPLS 538
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKA++K+ VIP E+ YEGATV+E + G+Y+ PIATLD
Sbjct: 539 SLLTRGQQIKVVSQLLRKAREKDFVIPTYSGTTQEE-QYEGATVIEPKKGYYDIPIATLD 597
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY++L+ P KL L P+ +TP+G F+K +++KG+LPEILE
Sbjct: 598 FSSLYPSIMMAHNLCYTSLLQPGMKEKLGLTPDQYTRTPAGNFFIKPSVRKGLLPEILEN 657
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AKADLK DPL + VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 658 LLAARKKAKADLKNETDPLRRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 717
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE ++ GY H+A VIYGDTDSVM++FG+ T+E AM+LG+EAA+Y+
Sbjct: 718 YGRTMIEQTKQEVEQRYCVANGYPHDAVVIYGDTDSVMIKFGIKTLEEAMELGKEAAEYV 777
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FIKPIKLEFEKVY+PYLLISKKRYAGLY+T + +DKMD KG+ETVRRDNC LV N+
Sbjct: 778 SSKFIKPIKLEFEKVYFPYLLISKKRYAGLYFTKTDTYDKMDCKGLETVRRDNCPLVANM 837
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L++RD GA+ Y K I+DLL NR+D+S LV+TK LTK+ DY K AHVEL
Sbjct: 838 MNTCLQKMLINRDPDGALAYAKQVIADLLCNRIDISQLVVTKELTKS--DYAAKQAHVEL 895
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD TAP +GDRVPYV+I AAKG AY+++EDPIYVLENNIPID+ YYLENQ+S
Sbjct: 896 ANKMKKRDPGTAPKLGDRVPYVLIAAAKGTPAYQKAEDPIYVLENNIPIDSSYYLENQLS 955
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
KPL+RIFEP+L + ++ LL GDHTR+ ++ T + F +R+ +CIGCK+++ +
Sbjct: 956 KPLIRIFEPLLGDKAESLLLRGDHTRTKAVVTSRVGALSAFTRRKETCIGCKSVLPGDGD 1015
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C HC EA+LY + ++++ ELE F RLWTQCQ CQGSLH++VLCTSRDCPIFY R
Sbjct: 1016 TAVCKHCLPNEAKLYQQELNRLCELENRFARLWTQCQRCQGSLHEEVLCTSRDCPIFYMR 1075
Query: 996 KKAQKDMAEAKLQLDRW 1012
KK Q D++ L R+
Sbjct: 1076 KKVQMDLSSQDKVLQRF 1092
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 220/336 (65%), Gaps = 9/336 (2%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW+RPP ++ S++FQQLDID+ G + + G I+R++GVT EG+SVC
Sbjct: 69 KWSRPP-PPLLNTEKDSLIFQQLDIDHYTGKPLKGMPGHQIGPVPIMRMYGVTMEGNSVC 127
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C VHGF PYF++ P+ + F L + + R++K V + V +E+ +K +I
Sbjct: 128 CHVHGFSPYFFVQVPENFTDNHCLPFKTALNKAILDDMRSNKDGVTEAVLAVELQKKENI 187
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y+ + PFLK+ VALP ++A + +L++ + LG ++ +ESNV F +RFM+D
Sbjct: 188 YGYRGGQKVPFLKVTVALPRLIAPAKRLLEKEVVYAALGTYNYQAFESNVDFDIRFMVDT 247
Query: 252 NIVGGNWIEVPVGKYRKTAKT------LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRIL 305
N+VG +W+E+P GK+R +K S CQ+E D + D IS PEGE++K+APFRIL
Sbjct: 248 NVVGCSWVELPPGKWRMRSKNNSSVPLTSRCQIEVDVSWEDFISHPPEGEWAKVAPFRIL 307
Query: 306 SFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFET 365
SFDIECAGRKG FPEP HDPVIQ+AN+V QG +PF+RNV TL +C+PIVG V+SF
Sbjct: 308 SFDIECAGRKGIFPEPNHDPVIQIANMVVKQGSPEPFVRNVFTLDTCSPIVGCQVLSFSK 367
Query: 366 ERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E ++L W DF+RE+DPD+ GYNI FDLPYL+ +
Sbjct: 368 ENEMLEKWADFVRELDPDIFTGYNINNFDLPYLLNR 403
>gi|324120714|dbj|BAJ78748.1| DNA polymerase delta catalytic subunit [Euconocephalus varius]
Length = 1035
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/615 (63%), Positives = 487/615 (79%), Gaps = 5/615 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH+II+DLQNG +TRRRLAVYCLKDAYLP RLLDKLM I NY+EMARVTGV ++
Sbjct: 419 QKEDVHHNIITDLQNGTPQTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVSLA 478
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKA+++N ++P AG ++ YEGATV+E + G+Y PIATLD
Sbjct: 479 SLLTRGQQIKVVSQLLRKARERNYLMP-AYSAGVQEDQYEGATVIEPKKGYYSDPIATLD 537
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ L L P+ KTP+ FVK +++KG+LPEILE
Sbjct: 538 FSSLYPSIMMAHNLCYTTLLQGGVKENLGLTPDQYTKTPASNFFVKGSVRKGLLPEILEN 597
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AKADLKE KDP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 598 LLSARKKAKADLKEEKDPFKQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 657
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE +++ GY+H+A VIYGDTDSVMV+FGV T+E AM LGREAA+++
Sbjct: 658 YGRTMIEQTKQEVEQRYSVANGYQHDASVIYGDTDSVMVKFGVKTLEEAMSLGREAAEFV 717
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ F+KPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV N+
Sbjct: 718 TSKFVKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNCPLVANM 777
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DRD GAV Y K ISDLL NR+D+S LV+TK LTK+ DY K AHV L
Sbjct: 778 MNTCLQKLLIDRDPNGAVDYAKQVISDLLCNRIDVSQLVVTKELTKS--DYAAKQAHVVL 835
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AE+M+KRD TAP +GDRVPYV AAK AY ++EDPIYVLENNIPID++YY+ENQ+S
Sbjct: 836 AEKMKKRDPGTAPKLGDRVPYVFTTAAKNTPAYMKAEDPIYVLENNIPIDSNYYMENQLS 895
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT- 937
KPLLRIFEPIL + ++ LL GDHTRS ++ T + F +R+ +C+GCKA++ + +
Sbjct: 896 KPLLRIFEPILGDKAESLLLRGDHTRSKTVVTSKVGALSAFTQRKETCLGCKAVLKDSSA 955
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LC+HC EA +Y + + ++Q LE F RLWT+CQ CQGSLH++VLCTSRDCPIFY RKK
Sbjct: 956 LCAHCSREEARIYQQELFRLQALEDQFSRLWTECQRCQGSLHEEVLCTSRDCPIFYMRKK 1015
Query: 998 AQKDMAEAKLQLDRW 1012
Q D+ L R+
Sbjct: 1016 VQMDLITQDKALQRF 1030
Score = 323 bits (827), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 214/332 (64%), Gaps = 5/332 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW RP +Q +++FQQ+DID+ G + G ++R+FG+T EG+SVC
Sbjct: 13 KWCRPA-PPNLNAQKDALIFQQIDIDHYSGQPIPGMPGSQIGPVPVMRMFGITAEGNSVC 71
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C VHGF PY +++ P+G + F L M S+ V V +E+V K+++
Sbjct: 72 CHVHGFSPYMFVTAPEGFTDKHCAQFRTALNSAMLADGFVSRDRVQVAVLAVEIVHKQNL 131
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y+ + PF+KI +A+P V S R I ++GI GL ++ +E+N+ F +RFM+D
Sbjct: 132 FGYRGDQDAPFIKITLAVPRHVGSVRRIFEKGISFAGLPPHTYQFFETNIDFDIRFMVDT 191
Query: 252 NIVGGNWIEVPVGKYRKTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
+VG +WIE+P GK+ AK S CQ+E D ++D I+ PEGE+SK+APFRILS+DI
Sbjct: 192 GVVGCSWIELPAGKWSMRAKDRFQSRCQIEVDVAWTDFIAHTPEGEWSKVAPFRILSYDI 251
Query: 310 ECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
ECAGRKG FPEP HDPVIQ+AN+V QG+ +PF+RNV TL +CAPIVG V+SF E+++
Sbjct: 252 ECAGRKGIFPEPNHDPVIQIANMVIQQGQTEPFLRNVFTLDTCAPIVGCQVLSFSKEQEM 311
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
L W +F+REVDPD+ GYNI FD PYLI +
Sbjct: 312 LEKWSEFVREVDPDIFTGYNINNFDFPYLINR 343
>gi|324120686|dbj|BAJ78734.1| DNA polymerase delta catalytic subunit [Pedetontus unimaculatus]
Length = 1035
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/616 (64%), Positives = 486/616 (78%), Gaps = 6/616 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSIISDLQNGN++TRRRLAVYCLKD+YLP RLLDKLM I NY+EMARVTGV +
Sbjct: 418 QKEDVQHSIISDLQNGNSQTRRRLAVYCLKDSYLPLRLLDKLMCIINYMEMARVTGVSLP 477
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKA++K+ VIP + GS++ YEGATV+E G+Y+ PIATLD
Sbjct: 478 SLLTRGQQIKVVSQLLRKAREKDFVIPTYQGTGSDE-QYEGATVIEPERGYYDVPIATLD 536
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P KL L P+ +TP+G FVK++++KG+LPEILE
Sbjct: 537 FSSLYPSIMMAHNLCYTTLLQPGWVNKLQLTPDRYIETPAGAMFVKASVRKGLLPEILES 596
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AK DLK+ DPL VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 597 LLAARKKAKEDLKKETDPLRCKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 656
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+ VE+KFT GY H+A+VIYGDTDSVMV+FGV TV AM LG+E A+Y+
Sbjct: 657 FGRQMIEFTKQQVENKFTVENGYSHDAKVIYGDTDSVMVRFGVSTVGEAMVLGKEGAEYV 716
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FIKPIKLEFEKVY+PYLLI+KKRYAGLY+T PE DKMD KGIETVRRDNC V N+
Sbjct: 717 SSKFIKPIKLEFEKVYFPYLLINKKRYAGLYFTRPEVHDKMDCKGIETVRRDNCPFVANI 776
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L++R+ GAV YVK ISDLL NR+D+S LVITK LTK+ DY K AHVEL
Sbjct: 777 MNMCLQKLLIERNPNGAVDYVKQVISDLLCNRVDISQLVITKELTKS--DYAAKQAHVEL 834
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +MRKRDA TAP +GDRVPYVI AAKG AY ++EDPI+VLEN++PID YYLENQ+S
Sbjct: 835 ANKMRKRDAGTAPKLGDRVPYVITAAAKGTPAYAKAEDPIFVLENSVPIDAEYYLENQLS 894
Query: 880 KPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT- 937
KPLLRIFEPIL + A LL G+HTR+ ++ T + F ++ SC+GCK+++ N +
Sbjct: 895 KPLLRIFEPILGDKAESVLLRGEHTRTKTVVTSRVGALSSFTTKRESCVGCKSVLPNNST 954
Query: 938 -LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
+C HC EA LY + + ++ +LE F RLWTQCQ CQGSLH+DVLCTSRDCPIFY RK
Sbjct: 955 AVCQHCSRDEAVLYRRELDKLSDLEDRFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMRK 1014
Query: 997 KAQKDMAEAKLQLDRW 1012
K Q D++ L R+
Sbjct: 1015 KVQLDLSTQDKVLQRF 1030
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 223/339 (65%), Gaps = 12/339 (3%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
A+W+RP + S++FQQLDID+ IG + +G ++R++GVT EG+SV
Sbjct: 6 ARWSRP-PPPPLDPKKNSLIFQQLDIDHYIGRPLAGMPGAQTGPVPVMRMYGVTAEGNSV 64
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRM---REANRNSKVPQFVRHIEMVQKR 189
CC +HGF PYFY+ P+ + + F + L + ++NR++ + + V +E+V++
Sbjct: 65 CCHIHGFSPYFYVQPPENFKKEHCTAFKESLNRFILNDMKSNRDN-LSEAVLCVELVERE 123
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
+I Y+ PFLKI++ALP ++A + +L++ LG+ S+ +ESN+ F +RFM+
Sbjct: 124 NIYSYRGGNKVPFLKIIIALPKLIAPAKRLLEKENMFPALGIHSYTAFESNIDFDIRFMV 183
Query: 250 DCNIVGGNWIEVPVGKY-------RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPF 302
D IVG NW+E+P K+ + T + +S CQ+E D + +IS PEG+++K+APF
Sbjct: 184 DAEIVGCNWLELPASKWQLRDRGNKSTLQPVSRCQIECDVSWEKMISHAPEGDWAKVAPF 243
Query: 303 RILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMS 362
RILSFDIECAGRKG FPEP HDPVIQ+ N+V QGE+ PFIRNV TL +CAPIVG +V+S
Sbjct: 244 RILSFDIECAGRKGIFPEPNHDPVIQIGNMVIRQGEQDPFIRNVFTLGTCAPIVGCEVLS 303
Query: 363 FETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
F E ++L W DF+RE DPD++ GYNI FD PYL+ +
Sbjct: 304 FTKEAELLKRWADFVREADPDIVTGYNINNFDFPYLLNR 342
>gi|324120766|dbj|BAJ78774.1| DNA polymerase delta catalytic subunit [Panorpa takenouchii]
Length = 1093
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/619 (63%), Positives = 493/619 (79%), Gaps = 9/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQN + +TRRRLAVYCLKDAYLP RLL+KLM I NY+EMARVTGVP+S
Sbjct: 473 QKEDVHHSIITDLQNESDQTRRRLAVYCLKDAYLPLRLLNKLMCIVNYMEMARVTGVPLS 532
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK+K+ ++P GS++ YEGATV+E + G+Y PI+TLD
Sbjct: 533 CLLTRGQQIKVVSQLLRKSKEAGYLMPVHTGQGSDE-QYEGATVIEPKRGYYADPISTLD 591
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMA+N+CY+TL+ P + KL L + + KTPS FVK ++++G+LPEILE
Sbjct: 592 FASLYPSIMMAHNICYTTLLAPSNRDKLGLTDDQITKTPSNNFFVKGSVRRGLLPEILES 651
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARKRAK +LK KDP +++VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 652 LLTARKRAKNELKVEKDPFKRSVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 711
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIEHTK+ VE ++T GYE +A VIYGDTDSVMV FGV ++E +M+LGREAA+Y+
Sbjct: 712 YGRSMIEHTKQEVEQRYTKQNGYESDAVVIYGDTDSVMVNFGVKSLERSMELGREAAEYV 771
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F+KPIKLEFEKVY+PYLLI+KKRYAGLY+TN EK+DK+D KGIETVRRDNC LV N+
Sbjct: 772 SAKFVKPIKLEFEKVYFPYLLINKKRYAGLYFTNAEKYDKIDCKGIETVRRDNCPLVANM 831
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DRD GAV+Y K ISDLL NR+D+S LVITK L+KT DY K AHVEL
Sbjct: 832 MNTCLQKLLIDRDPNGAVEYAKQIISDLLCNRIDISQLVITKELSKT--DYTAKQAHVEL 889
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD TAP +GDRVPYV+ + K AKAYE++EDPIYVLENNIPID+ YYL+NQ+S
Sbjct: 890 ANKMKKRDPGTAPKLGDRVPYVLTASTKNAKAYEKAEDPIYVLENNIPIDSKYYLDNQLS 949
Query: 880 KPLLRIFEPIL--KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
KPLLRIFEPIL K A LL+G+HT + +++T S + F K++ +C+GCKAL+
Sbjct: 950 KPLLRIFEPILGEKKAESILLNGEHTLTKAVATSRVSALSAFTKKREACLGCKALLPPGF 1009
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G LC HC +EAELY K ++ + LE F RLWT+CQ CQGSLH++VLCTSRDCPIFY
Sbjct: 1010 EQGALCPHCSPKEAELYQKEMTYERTLEERFCRLWTECQRCQGSLHEEVLCTSRDCPIFY 1069
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
RKK Q ++ + ++DR+
Sbjct: 1070 MRKKVQIELDTQQKRVDRF 1088
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 214/342 (62%), Gaps = 16/342 (4%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP----LSSGSAAIIRIFGVTRE 128
+KW+RP L + SI FQQLDID+ N + LP SG +++++GVT
Sbjct: 63 SKWSRPDLPK-LDPKVDSISFQQLDIDHY----NEKPLPGMPGAQSGQVPVMKMYGVTMA 117
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMV 186
G+SVCC VHGF PY Y++ P+ + F L + R+++ + + V +E++
Sbjct: 118 GNSVCCHVHGFSPYLYVTAPKSFENSNCLTFKNNLNKAVIADMRSNREGITEAVLQVELI 177
Query: 187 QKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALR 246
QK+++ Y + F+KI +ALP ++A+ + +L++ G + +ESN+ F +R
Sbjct: 178 QKQTLFGYHGEDLTTFIKITMALPRLIAAAKRLLEKESIYPEGGHHDYRAFESNIDFDIR 237
Query: 247 FMIDCNIVGGNWIEVPVGKYR-----KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAP 301
FM+D N+VG +WIE+P G + + K +S CQLE D + I+ PEGE++K+AP
Sbjct: 238 FMVDTNVVGCSWIELPAGTWTIRNKLRDPKPISRCQLEVDVAWDQFIAHEPEGEWAKVAP 297
Query: 302 FRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVM 361
FRILSFDIECAGRKG FPE HDPVIQ+AN+V QGE +PF+RNV TL +CAPIVG V
Sbjct: 298 FRILSFDIECAGRKGIFPEAQHDPVIQIANMVIRQGENEPFLRNVFTLNTCAPIVGSQVF 357
Query: 362 SFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
S+E E +L W DF+R++DPD+ GYNI FD PYL+ + +
Sbjct: 358 SYEKENKMLEKWADFVRQLDPDIFTGYNINNFDFPYLLNRAN 399
>gi|408397517|gb|EKJ76659.1| hypothetical protein FPSE_03209 [Fusarium pseudograminearum CS3096]
Length = 1104
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/621 (62%), Positives = 495/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 480 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA ++ LVIPN+K S++ YEGATV+E G+Y+ PIATLD
Sbjct: 540 FLLSRGQQVKFISQLFRKALEQKLVIPNLKSEASDE-QYEGATVIEPTRGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TLV+ + NL E TP+G+TFV +KG+L +ILE
Sbjct: 599 FASLYPSIMQAHNLCYTTLVSKKAIEAFNLQKDEDYIVTPNGDTFVTIKQRKGLLAQILE 658
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARK+AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS T
Sbjct: 659 ELLSARKQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLEIASSTT 718
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GR+MIE TK+ VE ++ GY H+A+VIYGDTDSVM++FG ++ AM+LG EA+ Y
Sbjct: 719 SFGRKMIEKTKEEVEGRYNIANGYSHDAQVIYGDTDSVMIKFGTKDLQEAMRLGEEASKY 778
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 779 VSEKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQT 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+D+D+PGA +YVK TI+DLL N++D+S LVITK LTK DDY K AHVE
Sbjct: 839 VIEKVLRMILIDQDVPGAQEYVKETIADLLQNKVDMSKLVITKALTK--DDYAAKQAHVE 896
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV+I+ GAK +E+SEDPIYVLE+N+PIDT YYL+NQ+
Sbjct: 897 LAQRMKKRDAGSAPGLGDRVAYVMIRGPAGAKNFEKSEDPIYVLEHNVPIDTRYYLDNQL 956
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + ++ LL+GDHTR IS++ P+ G+MKFAK+ +C+GCK +
Sbjct: 957 AKPLGRIFEPILGETKARSLLTGDHTRVISVAAPTVGGLMKFAKKTQTCMGCKKPLTGKE 1016
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
S G +CS+C R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1017 ESEGAVCSNCAPRVGELYKKTLDRVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1076
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A +L R++
Sbjct: 1077 YMRMKAKKDLEDAGRELTRFD 1097
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/360 (34%), Positives = 195/360 (54%), Gaps = 34/360 (9%)
Query: 55 ESLILRDIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
ES +L + Q +++ + W RPP+ +V + S+ FQ ++ +
Sbjct: 66 ESEVLEKLSQDLSDRKRNSTEKDQAWDRPPVVD-FVPERDSLCFQSIEAEE--------- 115
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
G A +++FGV G+SV V F+ Y Y+ P P D + F LE ++ +
Sbjct: 116 -GTLHGGRATVKLFGVNEAGNSVMLHVTDFKHYLYVPAPVNFQPQDCAAFKAYLETQVAQ 174
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD------RG 223
+ + + + +I +Q +S+P+LK+ V P + R + +G
Sbjct: 175 HQPS------IHSVAFAMRENIYGFQGNQSKPYLKVTVTDPKFINRVRTTIQSGNANWKG 228
Query: 224 IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL--SYCQLEFD 281
I + +++F N+ + LRFM+DC + G +W+E P Y+ + S CQ+E +
Sbjct: 229 IWRNDGEVQTF----DNLQYLLRFMVDCKVRGMSWVEAPAKTYKLVNDHIRQSNCQIEAE 284
Query: 282 CLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQP 341
Y D+I+ P GE+SKMAP RILSFDIECAGRKG FPE HDPVIQ+AN+VT GEK+P
Sbjct: 285 VSYIDLIAHEPVGEWSKMAPLRILSFDIECAGRKGIFPEANHDPVIQIANIVTKYGEKKP 344
Query: 342 FIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
F+RNV L+ + IV ++++E E +L W+ F+ DPD++ GYNI FD PYL+++
Sbjct: 345 FVRNVFCLQETSSIVATQILAYEKEEKMLSDWQKFLIRTDPDIITGYNISNFDFPYLLDR 404
>gi|261200399|ref|XP_002626600.1| DNA polymerase delta subunit [Ajellomyces dermatitidis SLH14081]
gi|239593672|gb|EEQ76253.1| DNA polymerase delta subunit [Ajellomyces dermatitidis SLH14081]
Length = 1106
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/623 (63%), Positives = 497/623 (79%), Gaps = 14/623 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 483 QKEDVHHTMITELFNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
FLLSRGQ +K LSQL RKA ++ LVIPN++ ++ SEQ YEGATV+E +Y+ PIATL
Sbjct: 543 FLLSRGQQVKFLSQLFRKALEQQLVIPNLRNESTSEQ--YEGATVIEPIRDYYDVPIATL 600
Query: 519 DFASLYPSIMMAYNLCYSTLVTPE--DARKLNLPPECVNKTPSGETFVKSNLQKGILPEI 576
DFASLYPSI+ A+NLCY+TL+ D ++ + + TP+G+ F S ++KG+L +I
Sbjct: 601 DFASLYPSIIQAHNLCYTTLLKKSTIDTHQMKEGEDYI-VTPNGDRFCTSKVRKGLLTQI 659
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
LEELL ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS
Sbjct: 660 LEELLGARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGRLPCLPIASS 719
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
TSYGRQMIE TK+ VE KFT GY H+A+V+YGDTDSVMV+FG+ + AMKLGREAA
Sbjct: 720 TTSYGRQMIEKTKEEVEAKFTIANGYSHDAKVVYGDTDSVMVKFGMQDLAEAMKLGREAA 779
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
D++S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT P+K+DKMDTKGIETVRRDNC +V
Sbjct: 780 DFVSAKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTRPDKYDKMDTKGIETVRRDNCRMV 839
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+ ++ L KIL+DRD+ A YVK TISDLL N++D+S LVITK L+K DY K AH
Sbjct: 840 QTVIETVLRKILIDRDVGAAQNYVKDTISDLLQNKIDMSKLVITKALSKK--DYTAKQAH 897
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELAERM+KRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+N
Sbjct: 898 VELAERMKKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDN 957
Query: 877 QISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN 935
Q++KPL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKF K+ +C+GCK ++
Sbjct: 958 QLAKPLTRIFEPILGEKKAGQLLTGEHTRSISVAAPTLGGLMKFTKKTQTCMGCKKPLTG 1017
Query: 936 -----GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
G +C +C+ R ELY KT+++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCP
Sbjct: 1018 KEGAEGAVCENCRPRLGELYTKTLTRVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCP 1077
Query: 991 IFYRRKKAQKDMAEAKLQLDRWN 1013
IFY R KA+KD+ +A+ +L R++
Sbjct: 1078 IFYMRMKAKKDVEDAEKELARFD 1100
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/337 (40%), Positives = 196/337 (58%), Gaps = 26/337 (7%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+WARP L + + + ++ FQQ+++ E L G A+ ++FGVT GHSV
Sbjct: 92 QWARPSLDN-FDAARDTLCFQQIEV---------EEGTLGGGKPAV-KLFGVTEAGHSVL 140
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
V F Y Y++ P P D F LE +E + + + ++MV + ++
Sbjct: 141 LHVTHFLHYLYVAAPVSFAPTDCEGFKAYLE---KEIDLHQPA---LHSVQMVMRENLFG 194
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM-----KSFMTYESNVLFALRFM 248
+Q + P+LKI V P + R +++ G Q + GM +T++ N+ + LRFM
Sbjct: 195 FQGNQKSPYLKITVTDPRHINKLRTLIETG-QANYKGMWRGNDDGILTFD-NIEYILRFM 252
Query: 249 IDCNIVGGNWIEVPVGKYRK--TAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILS 306
ID I G +W+E P KY + LS CQ+E Y D+I+ +GE++KMAP RILS
Sbjct: 253 IDTGISGMSWVEAPASKYHMLPMNERLSNCQIEATIHYRDLIAHPNDGEWAKMAPLRILS 312
Query: 307 FDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETE 366
FDIECAGRKG FPE DPVIQ+AN+VT GE +PF+RNV L +C+ IV + F+ E
Sbjct: 313 FDIECAGRKGVFPEANQDPVIQIANVVTRYGESKPFVRNVFVLDTCSLIVNTQLFEFDAE 372
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
+L+AWRDF+ EVDPDV+IGYNI FD PYL+++ +
Sbjct: 373 EKMLMAWRDFLEEVDPDVIIGYNIANFDFPYLLKRAE 409
>gi|327352438|gb|EGE81295.1| DNA polymerase [Ajellomyces dermatitidis ATCC 18188]
Length = 1106
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/623 (63%), Positives = 497/623 (79%), Gaps = 14/623 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 483 QKEDVHHTMITELFNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
FLLSRGQ +K LSQL RKA ++ LVIPN++ ++ SEQ YEGATV+E +Y+ PIATL
Sbjct: 543 FLLSRGQQVKFLSQLFRKALEQQLVIPNLRNESTSEQ--YEGATVIEPIRDYYDVPIATL 600
Query: 519 DFASLYPSIMMAYNLCYSTLVTPE--DARKLNLPPECVNKTPSGETFVKSNLQKGILPEI 576
DFASLYPSI+ A+NLCY+TL+ D ++ + + TP+G+ F S ++KG+L +I
Sbjct: 601 DFASLYPSIIQAHNLCYTTLLKKSTIDTHQMKEGEDYI-VTPNGDRFCTSKVRKGLLTQI 659
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
LEELL ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS
Sbjct: 660 LEELLGARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGRLPCLPIASS 719
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
TSYGRQMIE TK+ VE KFT GY H+A+V+YGDTDSVMV+FG+ + AMKLGREAA
Sbjct: 720 TTSYGRQMIEKTKEEVEAKFTIANGYSHDAKVVYGDTDSVMVKFGMQDLAEAMKLGREAA 779
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
D++S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT P+K+DKMDTKGIETVRRDNC +V
Sbjct: 780 DFVSAKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTRPDKYDKMDTKGIETVRRDNCRMV 839
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+ ++ L KIL+DRD+ A YVK TISDLL N++D+S LVITK L+K DY K AH
Sbjct: 840 QTVIETVLRKILIDRDVGAAQSYVKDTISDLLQNKIDMSKLVITKALSKK--DYTAKQAH 897
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELAERM+KRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+N
Sbjct: 898 VELAERMKKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDN 957
Query: 877 QISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN 935
Q++KPL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKF K+ +C+GCK ++
Sbjct: 958 QLAKPLTRIFEPILGEKKAGQLLTGEHTRSISVAAPTLGGLMKFTKKTQTCMGCKKPLTG 1017
Query: 936 -----GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
G +C +C+ R ELY KT+++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCP
Sbjct: 1018 KEGAEGAVCENCRPRLGELYTKTLTRVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCP 1077
Query: 991 IFYRRKKAQKDMAEAKLQLDRWN 1013
IFY R KA+KD+ +A+ +L R++
Sbjct: 1078 IFYMRMKAKKDVEDAEKELARFD 1100
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/337 (40%), Positives = 196/337 (58%), Gaps = 26/337 (7%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+WARP L + + + ++ FQQ+++ E L G A+ ++FGVT GHSV
Sbjct: 92 QWARPSLDN-FDAARDTLCFQQIEV---------EEGTLGGGKPAV-KLFGVTEAGHSVL 140
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
V F Y Y++ P P D F LE +E + + + ++MV + ++
Sbjct: 141 LHVTHFLHYLYVAAPVSFAPTDCEGFKAYLE---KEIDLHQPA---LHSVQMVMRENLFG 194
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM-----KSFMTYESNVLFALRFM 248
+Q + P+LKI V P + R +++ G Q + GM +T++ N+ + LRFM
Sbjct: 195 FQGNQKSPYLKITVTDPRHINKLRMLIETG-QANYKGMWRGNDDGILTFD-NIEYILRFM 252
Query: 249 IDCNIVGGNWIEVPVGKYRK--TAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILS 306
ID I G +W+E P KY + LS CQ+E Y D+I+ +GE++KMAP RILS
Sbjct: 253 IDTGISGMSWVEAPASKYHMLPMNERLSNCQIEATIHYRDLIAHPNDGEWAKMAPLRILS 312
Query: 307 FDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETE 366
FDIECAGRKG FPE DPVIQ+AN+VT GE +PF+RNV L +C+ IV + F+ E
Sbjct: 313 FDIECAGRKGVFPEANQDPVIQIANVVTRYGESKPFVRNVFVLDTCSLIVNTQLFEFDAE 372
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
+L+AWRDF+ EVDPDV+IGYNI FD PYL+++ +
Sbjct: 373 EKMLMAWRDFLEEVDPDVIIGYNIANFDFPYLLKRAE 409
>gi|449017897|dbj|BAM81299.1| DNA polymerase delta, catalytic subunit [Cyanidioschyzon merolae
strain 10D]
Length = 1084
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/1097 (44%), Positives = 653/1097 (59%), Gaps = 140/1097 (12%)
Query: 29 PTTPVIDDEF---LDEDVFLD--ETLLPEDEESLILRDIEQRQ-DFASRLAKWARPPLSS 82
P + DD F +DE +L E +L +L + +Q +F RL RP +
Sbjct: 13 PNDALDDDSFEVDVDEAAYLTNCEPVLETTGGALSGHETDQESIEFFRRLC--GRPAART 70
Query: 83 GYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPY 142
+S +S++F Q+ DYV+ + +R P ++ +R++GVT G SV V GF PY
Sbjct: 71 SLLSASESLLFNQVTCDYVV-ERHRAAEPHTT-----VRVYGVTLSGESVLLCVQGFAPY 124
Query: 143 FYISCPQGMGPDDISHFHQILEGRMREANRNSKVP-QFVRHIEMVQKRSIMYYQ-QQKSQ 200
FY S P+G G + LE + R R + + +E V++RS++YY+ +
Sbjct: 125 FYASAPKGFGDGALGELRAELEHKCRTMGRVADCSGDCILGVERVRRRSVLYYKPGEDDS 184
Query: 201 PFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRF-----MIDCN--- 252
FL+I V P +V G+L +G L + F +ES+V F LRF M+ C+
Sbjct: 185 EFLRITVRTPDLVRVAAGLLSQGSVLG----RVFDVFESSVDFVLRFMIDTKMMGCSWIE 240
Query: 253 --------------------IVGGNWIEV----PVGKYRKTA--KTLSYCQLEFDCLYSD 286
+ +W V P G++ +TA + LS+ + +C
Sbjct: 241 VPAGSYTVVSNALSPSYAQIVAEAHWQSVVCHPPSGEWLRTAAFRILSF---DIECAGRK 297
Query: 287 IISRHPE-----------GEFSKMAPFRILSFDI-ECAGRKG-----------------H 317
I PE GE+ K P F + CA G +
Sbjct: 298 GIFPEPENDSVIQIGCHLGEYGKTEPLVRAIFTLGSCAPVAGVQVISLNREQELLQSFRN 357
Query: 318 FPEPTHDPVIQVANLVTLQ------------GEKQPFIRNVMTLK--------SCAPIVG 357
F +I N+V + P++ + + S +
Sbjct: 358 FLVAADPDIITGYNIVNFDLPYLLNRASAIGASRFPYLGRICRERTTMRRTRLSSSAFGT 417
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMI-GYNICKFDLPYLIE-KEDVHHSIISDLQNG 415
+ M+F E V++ D ++ + D + Y++ +L E KEDVH+SII+DLQ G
Sbjct: 418 HESMTFSIEGRVIM---DMLQVIIRDHKLRSYSLNSVSSEFLNEQKEDVHYSIITDLQAG 474
Query: 416 NAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLL 475
N TRRRLAVYCLKDAYLP RL+DKLM + NY+E+ARVTGVP+ +LLSRG +KV+S L
Sbjct: 475 NEHTRRRLAVYCLKDAYLPLRLMDKLMSLTNYMELARVTGVPLDWLLSRGHMVKVVSLLH 534
Query: 476 RKAKQKNLVIPNV--KQAGSEQG----TYEGATVLEARAGFYEKPIATLDFASLYPSIMM 529
RKA + +L++P++ +AG G YEGATV+E + GFY PIAT+DFASLYPSIMM
Sbjct: 535 RKAHEADLLVPDLPRTEAGGRSGDGGPQYEGATVIEPKKGFYRTPIATMDFASLYPSIMM 594
Query: 530 AYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKA 589
AYNLCYSTLV D KL P+ +TP G FVK +++KGIL E+LEE LA+RK AK
Sbjct: 595 AYNLCYSTLVHESDVPKLK--PDDYIRTPLGHCFVKPSVRKGILSEMLEEFLASRKAAKR 652
Query: 590 DLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTK 649
D++ A DP + VL+GRQLALKISAN+VYGFTGA+VG+LPC+EIS+SVTSYGR MIE T+
Sbjct: 653 DMQNATDPFLREVLNGRQLALKISANAVYGFTGASVGKLPCMEISASVTSYGRNMIELTR 712
Query: 650 KLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFG-VPTVEAAMKLGREAADYISGTFIKPIK 708
VE + AEVIYGDTDSVMV+F T+E M+LGREAA ++ F P++
Sbjct: 713 STVERLYP-------GAEVIYGDTDSVMVKFNDHATLEQVMELGREAAKQLTNIFPPPVR 765
Query: 709 LEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKIL 768
LEFEKVYYPYLLISKKRYAGLYWT E+ DKMD KGIE+VRRDNC LV N+V L K+L
Sbjct: 766 LEFEKVYYPYLLISKKRYAGLYWTRLERHDKMDCKGIESVRRDNCRLVANVVDTVLQKLL 825
Query: 769 VDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDA 828
+++D+ GA+++VK +SDLL NR+DLSLLV++K LT+ DYE K AHV L E++RKRD+
Sbjct: 826 IEQDVDGAIEFVKKIVSDLLQNRIDLSLLVVSKTLTRATTDYEAKQAHVFLVEKLRKRDS 885
Query: 829 ATAPNVGDRVPYVIIKAA-KGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
+AP++GDRVPYVIIK A K KAY R+EDPIYVLEN+IPID HYYLEN + KPL RIF
Sbjct: 886 GSAPSLGDRVPYVIIKGATKNEKAYTRAEDPIYVLENSIPIDAHYYLENMLRKPLERIFS 945
Query: 888 PILKNASKELLSGDHTRSISISTP-SNSGIMKFAKRQLSCIGCKALISNG---------- 936
++K + L SG HTRSI ++TP + SGIMKFAK +L C+ C+A I+
Sbjct: 946 AVMKRP-ETLFSGAHTRSIQVATPRTGSGIMKFAKFRLQCVRCRAGINEAELQKRGLKGS 1004
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC HC+ EAE Y + + Q ELE LF LWTQCQEC GS QDVLC++ DCPIFYRR+
Sbjct: 1005 ALCEHCRDFEAETYLRHLKQTAELEQLFSALWTQCQECMGSCIQDVLCSNGDCPIFYRRR 1064
Query: 997 KAQKDMAEAKLQLDRWN 1013
K QKD+ EA+ L R+
Sbjct: 1065 KVQKDITEAQTILGRFG 1081
>gi|239607450|gb|EEQ84437.1| DNA polymerase delta subunit [Ajellomyces dermatitidis ER-3]
Length = 1106
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/623 (63%), Positives = 497/623 (79%), Gaps = 14/623 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 483 QKEDVHHTMITELFNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
FLLSRGQ +K LSQL RKA ++ LVIPN++ ++ SEQ YEGATV+E +Y+ PIATL
Sbjct: 543 FLLSRGQQVKFLSQLFRKALEQQLVIPNLRNESTSEQ--YEGATVIEPIRDYYDVPIATL 600
Query: 519 DFASLYPSIMMAYNLCYSTLVTPE--DARKLNLPPECVNKTPSGETFVKSNLQKGILPEI 576
DFASLYPSI+ A+NLCY+TL+ D ++ + + TP+G+ F S ++KG+L +I
Sbjct: 601 DFASLYPSIIQAHNLCYTTLLKKSTIDTHQMKEGEDYI-VTPNGDRFCTSKVRKGLLTQI 659
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
LEELL ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS
Sbjct: 660 LEELLGARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGRLPCLPIASS 719
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
TSYGRQMIE TK+ VE KFT GY H+A+V+YGDTDSVMV+FG+ + AMKLGREAA
Sbjct: 720 TTSYGRQMIEKTKEEVEAKFTIANGYSHDAKVVYGDTDSVMVKFGMQDLAEAMKLGREAA 779
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
D++S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT P+K+DKMDTKGIETVRRDNC +V
Sbjct: 780 DFVSAKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTRPDKYDKMDTKGIETVRRDNCRMV 839
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+ ++ L KIL+DRD+ A YVK TISDLL N++D+S LVITK L+K DY K AH
Sbjct: 840 QTVIETVLRKILIDRDVGAAQSYVKDTISDLLQNKIDMSKLVITKALSKK--DYTAKQAH 897
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELAERM+KRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+N
Sbjct: 898 VELAERMKKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDN 957
Query: 877 QISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN 935
Q++KPL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKF K+ +C+GCK ++
Sbjct: 958 QLAKPLTRIFEPILGEKKAGQLLTGEHTRSISVAAPTLGGLMKFTKKTQTCMGCKKPLTG 1017
Query: 936 -----GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
G +C +C+ R ELY KT+++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCP
Sbjct: 1018 KEGAEGAVCENCRPRLGELYTKTLTRVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCP 1077
Query: 991 IFYRRKKAQKDMAEAKLQLDRWN 1013
IFY R KA+KD+ +A+ +L R++
Sbjct: 1078 IFYMRMKAKKDVEDAEKELARFD 1100
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/337 (40%), Positives = 196/337 (58%), Gaps = 26/337 (7%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+WARP L + + + ++ FQQ+++ E L G A+ ++FGVT GHSV
Sbjct: 92 QWARPSLDN-FDAARDTLCFQQIEV---------EEGTLGGGKPAV-KLFGVTEAGHSVL 140
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
V F Y Y++ P P D F LE +E + + + ++MV + ++
Sbjct: 141 LHVTHFLHYLYVAAPVSFAPTDCEGFKAYLE---KEIDLHQPA---LHSVQMVMRENLFG 194
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM-----KSFMTYESNVLFALRFM 248
+Q + P+LKI V P + R +++ G Q + GM +T++ N+ + LRFM
Sbjct: 195 FQGNQKSPYLKITVTDPRHINKLRTLIETG-QANYKGMWRGNDDGILTFD-NIEYILRFM 252
Query: 249 IDCNIVGGNWIEVPVGKYRK--TAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILS 306
ID I G +W+E P KY + LS CQ+E Y D+I+ +GE++KMAP RILS
Sbjct: 253 IDTGISGMSWVEAPASKYHMLPMNERLSNCQIEATIHYRDLIAHPNDGEWAKMAPLRILS 312
Query: 307 FDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETE 366
FDIECAGRKG FPE DPVIQ+AN+VT GE +PF+RNV L +C+ IV + F+ E
Sbjct: 313 FDIECAGRKGVFPEANQDPVIQIANVVTRYGESKPFVRNVFVLDTCSLIVNTQLFEFDAE 372
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
+L+AWRDF+ EVDPDV+IGYNI FD PYL+++ +
Sbjct: 373 EKMLMAWRDFLEEVDPDVIIGYNIANFDFPYLLKRAE 409
>gi|325090528|gb|EGC43838.1| DNA polymerase subunit delta large [Ajellomyces capsulatus H88]
Length = 1111
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/623 (63%), Positives = 497/623 (79%), Gaps = 14/623 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 488 QKEDVHHTMITELFNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 547
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
FLLSRGQ +K +SQL RKA ++ LVIPN++ ++ SEQ YEGATV+E FY+ PIATL
Sbjct: 548 FLLSRGQQVKFISQLFRKALEQQLVIPNLRNESTSEQ--YEGATVIEPIRDFYDVPIATL 605
Query: 519 DFASLYPSIMMAYNLCYSTLVTPE--DARKLNLPPECVNKTPSGETFVKSNLQKGILPEI 576
DFASLYPSI+ A+NLCY+TL+ DA ++ + + TP+G+ F S ++KG+L +I
Sbjct: 606 DFASLYPSIIQAHNLCYTTLLKKSTIDAHQMKEGEDYI-VTPNGDRFCTSKVRKGLLTQI 664
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
LEELL ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS
Sbjct: 665 LEELLGARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASS 724
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
TSYGRQMIE TK+ VE K+T GY H+A+V+YGDTDSVMV+FG+ + AMKLG+EAA
Sbjct: 725 TTSYGRQMIEKTKEEVEAKYTIANGYSHDAKVVYGDTDSVMVKFGMKDLAEAMKLGQEAA 784
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
DY+S FI PIKLEFEKVY+PYLLI+KKRYAGLYWT P+ +DKMDTKGIETVRRDNC +V
Sbjct: 785 DYVSSKFINPIKLEFEKVYFPYLLINKKRYAGLYWTRPDNYDKMDTKGIETVRRDNCRMV 844
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+ ++ L KIL+DRD+ GA YVK TISDLL N++D+S LVITK L+K DY K AH
Sbjct: 845 QTVIETVLRKILIDRDVDGAQSYVKDTISDLLQNKIDMSKLVITKALSKK--DYTAKQAH 902
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELAERM+KRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+N
Sbjct: 903 VELAERMKKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDN 962
Query: 877 QISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-- 933
Q++KPL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKF K+ +C+GCK +
Sbjct: 963 QLAKPLTRIFEPILGEKKAGQLLTGEHTRSISVAAPTLGGLMKFTKKTQTCMGCKKPLTG 1022
Query: 934 ---SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
S+G +C C+ R ELY KT+++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCP
Sbjct: 1023 KEDSDGAVCQDCRPRLGELYTKTLTKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCP 1082
Query: 991 IFYRRKKAQKDMAEAKLQLDRWN 1013
IFY R KA+KD+ +A+ +L R++
Sbjct: 1083 IFYMRMKAKKDVEDAEKELARFD 1105
Score = 252 bits (644), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 200/348 (57%), Gaps = 29/348 (8%)
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
+++ + + +WARP L + S+ ++ FQQ++ E + G +++FG
Sbjct: 87 KENNSEKDQQWARPSLDNFDASR-DNLCFQQIEA---------EEGTIGGGKQPAVKLFG 136
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT GHSV V F Y Y++ P P D F LE + E + + + ++
Sbjct: 137 VTEAGHSVLLHVTHFLHYLYVAAPVSFAPTDCEGFKAYLEHEI-EIHHPA-----IHSVQ 190
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-------IQLDGLGMKSFMTY 237
MV + ++ +Q + P+LKI V P + R +++ G + D G+ +F
Sbjct: 191 MVMRENLFGFQGNQKSPYLKITVTDPRHINKLRTLIETGKANYRGMWRADADGILTF--- 247
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGE 295
N+ + LRFMID I G +W+E P KY+ + +S CQ+E Y D+I+ +GE
Sbjct: 248 -DNIEYILRFMIDTGISGMSWVEAPASKYQILPMVERMSNCQIEATIHYRDLIAHPNDGE 306
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
++KMAP RILSFDIECAGRKG FPE DPVIQ+AN+VT GE +PFIRNV L +C+ I
Sbjct: 307 WAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESKPFIRNVFVLGTCSLI 366
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
V ++ F+TE +L+AW++F+ EVDPDV+IGYNI FD PYL+++ +
Sbjct: 367 VNTQLLEFDTEEKMLMAWKNFLVEVDPDVIIGYNIANFDFPYLLKRAE 414
>gi|345564490|gb|EGX47452.1| hypothetical protein AOL_s00083g388 [Arthrobotrys oligospora ATCC
24927]
Length = 1099
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/625 (62%), Positives = 491/625 (78%), Gaps = 12/625 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 472 QKEDVHHTMITELFNGTPESRRRLAVYCLKDAYLPQRLMDKLMCLINYAEMARVTGVPFN 531
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQ---AGSEQGTYEGATVLEARAGFYEKPIA 516
FLL+RGQ +K LSQL RKA +++LV+PN +Q G ++ YEGATV+E GFY++P+A
Sbjct: 532 FLLARGQQVKFLSQLFRKAGEQSLVVPNREQKVGGGGDEEQYEGATVIEPTRGFYKEPVA 591
Query: 517 TLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPE 575
TLDFASLYPSIMMA+NLCY+TL E K+ + E + TP+G+ FV ++++KG+L
Sbjct: 592 TLDFASLYPSIMMAHNLCYTTLTKQEHMDKMGMKEGEDYHVTPTGDVFVNTSVRKGLLVT 651
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
I E+LL ARKRAK DLK DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+ I+S
Sbjct: 652 IFEDLLGARKRAKNDLKNETDPFKKAVLNGRQLALKISANSVYGLTGATNGKLPCLAIAS 711
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
S TSYGR+MIE TK VE ++T GY H+A+VIYGDTDSVMV+FG ++ M +G EA
Sbjct: 712 SCTSYGREMIEATKAEVEKRYTIANGYSHDAQVIYGDTDSVMVKFGPKDLKKVMAMGEEA 771
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A ++S FI PIKLEFEKVY+PYLLI+KKRYAGLYWTNP K+DKMD+KGIETVRRDNC L
Sbjct: 772 AAFVSSKFINPIKLEFEKVYFPYLLINKKRYAGLYWTNPNKYDKMDSKGIETVRRDNCRL 831
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V+ ++ L KIL+D+D GA YVK ISDLL N++D+S LVITK L+K ++Y K A
Sbjct: 832 VQTVIETVLKKILIDQDEDGAQAYVKDMISDLLQNKVDMSNLVITKALSK--EEYAAKQA 889
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
HVELAERMRKRDA +AP +GDRV YVI+K A GAK YE+SEDPIYVLE+N+PIDT YYLE
Sbjct: 890 HVELAERMRKRDAGSAPTLGDRVAYVIVKGAGGAKNYEKSEDPIYVLEHNVPIDTKYYLE 949
Query: 876 NQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS 934
Q++KPL RIFEPIL + +LL+GDHTR+IS++ P+ G+MKFAK+ +C+GCK ++
Sbjct: 950 QQLAKPLHRIFEPILGAKRADQLLTGDHTRTISVAAPTMGGLMKFAKKTQTCMGCKTPLT 1009
Query: 935 -----NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
G +C C+ R AELY KT+S+V +LEV FGRLWTQCQ CQGSLH +V+C+SRDC
Sbjct: 1010 RKDEAGGAVCHSCQDRSAELYQKTLSKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDC 1069
Query: 990 PIFYRRKKAQKDMAEAKLQLDRWNF 1014
PIFY R KA+K++ E +L R+++
Sbjct: 1070 PIFYMRMKAKKEVEEMGKELKRFDY 1094
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 186/341 (54%), Gaps = 27/341 (7%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KWARP + ++ ++FQQ+D + D P +R+FGVT GHSV
Sbjct: 76 KWARPSMDDWKPNEA-DLIFQQIDTE----DGYWNGKP-------CVRLFGVTESGHSVL 123
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
V F Y Y+ P G I +H LE R+ + + ++V + ++
Sbjct: 124 LHVTDFLHYLYVQAPVGFNQSHILPYHDFLEHRIGAGGAD-----VIASTQLVMRENLYG 178
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDR---GIQLDGL--GMKSFMTYESNVLFALRFM 248
+Q + P++KI V P + R L+ DG+ G+ + N+ + +RFM
Sbjct: 179 FQGNQKSPYIKITVTDPKHIPKVRRFLESRESDSNYDGMWNGVSGGIMTFDNIQYIMRFM 238
Query: 249 IDCNIVGGNWIEVPVGKYR-----KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFR 303
+D + G +W+EV KY+ + L Q+E C Y D+I+ EGE+SKMAP R
Sbjct: 239 VDTKMSGMSWVEVKKDKYKYVPTGANSIRLGSAQIEASCHYKDLITHQAEGEWSKMAPLR 298
Query: 304 ILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSF 363
+LSFDIECAGRKG FP+P DPVIQ+A++VT G+KQPFIRNV L +CA I G + F
Sbjct: 299 VLSFDIECAGRKGIFPDPKIDPVIQIASVVTRYGDKQPFIRNVFCLNTCALIAGCQLCEF 358
Query: 364 ETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
E +L AW F++EVDPDV+IGYNI FD PYL+E+ +
Sbjct: 359 SREDQMLRAWTKFLQEVDPDVIIGYNIANFDFPYLLERAET 399
>gi|324120712|dbj|BAJ78747.1| DNA polymerase delta catalytic subunit [Nomadacris japonica]
Length = 1092
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/615 (63%), Positives = 487/615 (79%), Gaps = 5/615 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH+II+DLQNGN +TRRRLAVYCLKDAYLP RLLDKLM I NY+EMARVTGV ++
Sbjct: 476 QKEDVHHNIITDLQNGNPQTRRRLAVYCLKDAYLPIRLLDKLMCIINYMEMARVTGVSLA 535
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKA+++N ++P G+++ +EGATV+E + G+Y PIATLD
Sbjct: 536 SLLTRGQQIKVVSQLLRKARERNYLMP-AYGGGAQEEQFEGATVIEPKKGYYSDPIATLD 594
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ +L L P+ KTP+G FV+ ++ KG+LPEILE
Sbjct: 595 FSSLYPSIMMAHNLCYTTLLQGVAKDRLGLSPDQYTKTPAGNYFVRQSVCKGLLPEILEN 654
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAK +LK DP +K VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 655 LLSARKRAKEELKRETDPFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 714
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE + GYEH++EVIYGDTDSVMV+FGV ++EAAM LGREAA+Y+
Sbjct: 715 YGRTMIEQTKQEVEQHYNIANGYEHDSEVIYGDTDSVMVKFGVKSLEAAMALGREAAEYV 774
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F+KPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDNC LV N+
Sbjct: 775 SSKFVKPIKLEFEKVYFPYLLINKKRYAGLYFTQPDKYDKMDCKGIETVRRDNCPLVANM 834
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L++RD GAV+Y K ISDLL NR+D+S LVITK LTK+ DY K AHVEL
Sbjct: 835 MNTCLQKLLIERDPDGAVEYAKQIISDLLCNRIDISQLVITKELTKS--DYAAKQAHVEL 892
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD TAP +GDRVPYV+ AAK AY ++EDPIYVLENNIPID+ YYLENQ+S
Sbjct: 893 AAKMKKRDPGTAPKLGDRVPYVLTTAAKNTPAYMKAEDPIYVLENNIPIDSSYYLENQLS 952
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT- 937
KPLLRIF PIL + ++ LL GDHTR+ ++ T + F +R+ +CIGCKA++ + +
Sbjct: 953 KPLLRIFAPILGDKAESILLRGDHTRTKALVTSRVGALAAFTRRKETCIGCKAVLQDTSA 1012
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LCSHC+ E +LY + + ++Q LE F RLWTQCQ CQGSLH++V+CTSRDCPIFY RKK
Sbjct: 1013 LCSHCRKDEVKLYQQELFRLQSLEEQFCRLWTQCQRCQGSLHEEVICTSRDCPIFYMRKK 1072
Query: 998 AQKDMAEAKLQLDRW 1012
Q D+ L R+
Sbjct: 1073 VQMDLVTQDRALQRF 1087
Score = 315 bits (807), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 216/332 (65%), Gaps = 5/332 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW+RPP S+ +I FQQ+DID+ G + G I+R++G+T + +SVC
Sbjct: 70 KWSRPPPPQLDPSR-DAIEFQQIDIDHYTGSPLTGMPGSQLGPVPIMRMYGITMDRNSVC 128
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C VHGF PYF++S P G F + L + R+++ V Q V +E+V+++++
Sbjct: 129 CHVHGFSPYFFVSAPDGFKETHCQSFREALNKAVLADMRSNREEVQQAVLAVEIVKRQTL 188
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y Q Q F+KI VALP ++A + +L++ + LG + YESN+ F +RFM+D
Sbjct: 189 FGYHGQDLQTFIKITVALPRLIAPAKRLLEKEVIFPALGPHQYQAYESNIDFDIRFMVDT 248
Query: 252 NIVGGNWIEVPVGKYRK--TAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
++VG +W+++P GK+R T + S CQ+ D + D+I+ PEGE+SK+APFRILSFDI
Sbjct: 249 HMVGCSWVQLPAGKWRPRPTKQVQSRCQIXVDISWEDLIAHPPEGEWSKVAPFRILSFDI 308
Query: 310 ECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
ECAGRKG FPEP HDPVIQ+AN+V QGE +PF+R V TL +CAPIVG V+SF+ E ++
Sbjct: 309 ECAGRKGVFPEPNHDPVIQIANMVIRQGEHEPFLRIVFTLDTCAPIVGCKVLSFDKETEM 368
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
L W +F+REVDPD+ GYNI FD YLI +
Sbjct: 369 LEKWAEFVREVDPDLFTGYNINNFDFYYLISR 400
>gi|384486877|gb|EIE79057.1| hypothetical protein RO3G_03762 [Rhizopus delemar RA 99-880]
Length = 1059
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/619 (62%), Positives = 496/619 (80%), Gaps = 7/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++LQ GN ETRRRLAVYCLKDA+LP RL+DKLM +FNY EMARVTG+P +
Sbjct: 438 QKEDVHHSIITELQKGNPETRRRLAVYCLKDAFLPLRLMDKLMLLFNYTEMARVTGIPFN 497
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++L RGQ IKV+SQL R+A +++LVIP +K ++ YEGATV++ G+Y+ PI TLD
Sbjct: 498 YILVRGQQIKVVSQLYRRALEQDLVIPVIKSEIMDE-PYEGATVIDPEKGYYDVPITTLD 556
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIM A+NLCY+TL+ PE A++L L TP+ + FVK+ +KG+LPEIL
Sbjct: 557 FTSLYPSIMQAHNLCYTTLLKPEVAQRLGLVKGVDYEVTPNNDLFVKATRRKGLLPEILS 616
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+LL+ARKRAK DLK+ KDP ++AVLDGRQLALKISANSVYGFTGATVG+LPC++ISSSVT
Sbjct: 617 DLLSARKRAKNDLKKEKDPFKRAVLDGRQLALKISANSVYGFTGATVGKLPCLQISSSVT 676
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MI TK+ VED F+ GY+H+A+VIYGDTDSVM++FGV ++ AM+LGRE+A
Sbjct: 677 AYGRGMIIKTKETVEDHFSKKNGYKHDAKVIYGDTDSVMIKFGVDNLKEAMQLGRESAKL 736
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ FI+PI L+FEKVY+PYLLISKKRYAGLYWT +K+DK+D KGIETVRRDNC LV N
Sbjct: 737 VTEKFIRPINLDFEKVYFPYLLISKKRYAGLYWTREDKYDKLDAKGIETVRRDNCRLVSN 796
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++++CL K+LV R++ GA ++VK TI+DLL N++DLS LVITK L+K+ DY K AHVE
Sbjct: 797 VISKCLDKLLVQRNVAGAQEFVKQTIADLLQNKVDLSQLVITKALSKS--DYANKQAHVE 854
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVIIKA AY+RSEDP+YVL++NIPIDT YYLE+Q+
Sbjct: 855 LAERMRKRDAGSAPALGDRVAYVIIKAGNNTPAYDRSEDPLYVLDHNIPIDTKYYLEHQL 914
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
SKPLLRIFEPIL + ++ LLSG HTR+++I+TP+ G+M+FA + +C+GCK+ + N
Sbjct: 915 SKPLLRIFEPILGDKAESLLSGSHTRTVNIATPTVGGLMRFAVKTTTCLGCKSPLPRGDN 974
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
C C + ELY +S +++LEV F RLWTQCQ CQ SLHQDV+C++ DCPIFY R
Sbjct: 975 SATCKQCSDKLPELYQYQLSTLKDLEVKFSRLWTQCQRCQESLHQDVICSNNDCPIFYMR 1034
Query: 996 KKAQKDMAEAKLQLDRWNF 1014
KKAQKDM E +L+R+++
Sbjct: 1035 KKAQKDMNEVTGKLNRFDY 1053
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/365 (39%), Positives = 208/365 (56%), Gaps = 39/365 (10%)
Query: 42 DVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARP---PLSSGYVSQCQSIMFQQLDI 98
D F ++ EDE ++ ++Q F + W+RP PL ++FQQ+++
Sbjct: 32 DTFQKQSSTFEDELIMLNESMDQDIKFENTEHTWSRPSPPPLDPSK----DKLVFQQIEV 87
Query: 99 DYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D + + R+ IR++GVT+EG+SV C V GF PYFY P G ++
Sbjct: 88 DDYMDYTVRK---------PTIRLYGVTQEGNSVLCHVKGFHPYFYFPAPVGFQRSHLAS 138
Query: 159 FHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG 218
Q L + N + ++++V K+SI YQ P++++ V P ++ C+G
Sbjct: 139 LKQSLSTAVGFGN-------IIDNVDIVMKQSIYGYQGDIKTPYIRVTVYDPKDISKCKG 191
Query: 219 ILDRGIQLDGLGM--KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYC 276
++ GI + GL ++ T+E I G NWIE+P G + K S
Sbjct: 192 KIESGITVAGLDRPCRADTTFE--------------ITGSNWIELPPGTFSFVNKRTSEI 237
Query: 277 QLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQ 336
QLE + Y +IS PEGE+S +AP RILSFDIECAGRKG FPEP+ DPVIQ+A++V +
Sbjct: 238 QLEVETTYDKLISHVPEGEWSGIAPLRILSFDIECAGRKGIFPEPSVDPVIQIASVVQIH 297
Query: 337 GEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLP 396
G+K+PFIRNV TL +CAPIVG V+ F+ E ++L W DFIREVDPD++IGYN FD P
Sbjct: 298 GQKKPFIRNVFTLDTCAPIVGSQVLCFDDESELLKKWSDFIREVDPDMIIGYNTTNFDFP 357
Query: 397 YLIEK 401
YL+++
Sbjct: 358 YLLDR 362
>gi|171693865|ref|XP_001911857.1| hypothetical protein [Podospora anserina S mat+]
gi|170946881|emb|CAP73685.1| unnamed protein product [Podospora anserina S mat+]
Length = 1108
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/622 (62%), Positives = 493/622 (79%), Gaps = 10/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L G E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 484 QKEDVHHSMITELFEGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 543
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ +K LSQL RKA ++ LVIPN++ SE+ YEGATV+E G+Y+ PIATLD
Sbjct: 544 FLLARGQQVKFLSQLFRKALEQKLVIPNMRSESSEE-QYEGATVIEPTRGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ +D + +L E TP+G+ FV + +KG+L +ILE
Sbjct: 603 FASLYPSIIQAHNLCYTTLIKKKDIERWSLVKDEDYIVTPNGDMFVTTKKRKGLLAQILE 662
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARK AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS T
Sbjct: 663 ELLSARKEAKRELAAETDPFKKAVLNGRQLALKISANSVYGLTGATNGKLPCLEIASSTT 722
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GRQMIE TK VE+++ GY H+A+VIYGDTDSVMV+FG + AMKLG +AA+Y
Sbjct: 723 AFGRQMIERTKHEVEERYCIKNGYSHDAQVIYGDTDSVMVKFGTKELAEAMKLGEDAANY 782
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 783 VSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQT 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+DRD+PGA +YVK TI+DLL NR+D+S LVITK LTK DDY K AHVE
Sbjct: 843 VIEKVLRMILIDRDVPGAQEYVKDTIADLLQNRVDMSKLVITKALTK--DDYAAKQAHVE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA RM+KRDA +AP +GDRV YV++K A G+K +ERSEDPIYVLE+N+PIDT YYL+NQ+
Sbjct: 901 LAHRMKKRDAGSAPALGDRVAYVMVKGATGSKNFERSEDPIYVLEHNVPIDTKYYLDNQL 960
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + +K LL+GDHTR+IS++ P G+MKFAK+ +C+GCK +
Sbjct: 961 AKPLGRIFEPILGETKAKSLLTGDHTRAISVAAPKVGGLMKFAKKTQTCMGCKKPLTGKE 1020
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
S G +C+ R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1021 ESRGAVCADDAPRVGELYKKTLDKVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1080
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A +L R++F
Sbjct: 1081 YMRMKAKKDLEDANGELARFDF 1102
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 206/358 (57%), Gaps = 27/358 (7%)
Query: 55 ESLILRDIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDY-VIGDSNRE 108
ES +L + Q +Q+ + + W RPP+ + + QS+ FQ ++ + IG
Sbjct: 68 ESEVLERLNQDISDLKQNNSEKDQAWERPPIPNDFDPSKQSLCFQAIEAEEGTIG----- 122
Query: 109 LLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR 168
G +++FGVT G+SV V F+ Y Y++ P +D F LE +M
Sbjct: 123 ------GGQPAVKLFGVTENGNSVLLHVKDFKHYLYVAAPVSFVVEDCLAFKAYLESQM- 175
Query: 169 EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDG 228
++N + Q + ++ + + +I +Q P++K+ V P + R +++RG + +
Sbjct: 176 --SQNHQYQQVIHNVSLTMRENIYGFQGNVQNPYIKVTVTDPKHINKVRTMIERG-EANW 232
Query: 229 LGM----KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT-AKTLSYCQLEFDCL 283
GM MTY+S + + LRFM+DC+I G +W+E P G Y S CQ E
Sbjct: 233 KGMWKHDGGIMTYDS-IQYLLRFMVDCSIAGMSWVEAPAGAYDLIHMNKQSNCQFEAVIS 291
Query: 284 YSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFI 343
Y ++IS P GE+SKMAP RILSFDIECAGRKG FPE HD VIQ+AN+VT G+K+PF+
Sbjct: 292 YRELISHKPSGEWSKMAPLRILSFDIECAGRKGIFPEAQHDSVIQIANIVTKYGDKKPFV 351
Query: 344 RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
RNV L + +PIV ++ F+ E +L AWRDF+ +VDPD++IGYNI FD PYL+++
Sbjct: 352 RNVFCLDTTSPIVATQILEFKDEGKMLAAWRDFLEKVDPDIIIGYNIANFDFPYLLDR 409
>gi|295661753|ref|XP_002791431.1| DNA polymerase delta catalytic subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279988|gb|EEH35554.1| DNA polymerase delta catalytic subunit [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1110
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/622 (62%), Positives = 496/622 (79%), Gaps = 12/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG A++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 487 QKEDVHHTMITELFNGTADSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 546
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
FLLSRGQ +K +SQL RKA ++ LVIPN++ +A SEQ YEGATV+E +Y+ PIATL
Sbjct: 547 FLLSRGQQVKFISQLFRKALEQQLVIPNLRNEATSEQ--YEGATVIEPLRAYYDVPIATL 604
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEIL 577
DFASLYPSI+ A+NLCY+TL+ + E TP+G+ F + ++KG+L +IL
Sbjct: 605 DFASLYPSIIQAHNLCYTTLLKKSTIEAHGMKEGEDYIVTPNGDRFCTAKVRKGLLTQIL 664
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
EELL ARKRAK +L DP +KAVL+GRQLALK+SANSVYG TGATVG+LPC+ I+SS
Sbjct: 665 EELLGARKRAKKELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATVGKLPCLPIASST 724
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TSYGRQMIE TK+ VE K+T GY ++A+V+YGDTDSVMV+FG + AMKLG+EAAD
Sbjct: 725 TSYGRQMIEKTKEEVEAKYTIANGYSNDAQVVYGDTDSVMVKFGTKDLAEAMKLGQEAAD 784
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
Y+S FI+PIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNC +V+
Sbjct: 785 YVSDKFIRPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCRMVQ 844
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ L KIL++RD+ GA YVK+TISDLL N++D+S LVITK L+K DY K AHV
Sbjct: 845 TVIETVLKKILIERDVDGAQNYVKNTISDLLQNKIDMSKLVITKALSK--KDYTAKQAHV 902
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELAERM+KRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+NQ
Sbjct: 903 ELAERMKKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDNQ 962
Query: 878 ISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--- 933
++KPL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKF K+ +C+GCK +
Sbjct: 963 LAKPLTRIFEPILGEKKAGQLLTGEHTRSISVAAPTLGGLMKFTKKMQTCMGCKKPLVSK 1022
Query: 934 --SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
S+G +C +C+ R ELY KT+++ +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPI
Sbjct: 1023 DGSDGAVCENCRPRLGELYTKTLTKASDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPI 1082
Query: 992 FYRRKKAQKDMAEAKLQLDRWN 1013
FY R KA+KD+ +A+ +L R++
Sbjct: 1083 FYMRMKAKKDVEDAEKELSRFD 1104
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/345 (39%), Positives = 200/345 (57%), Gaps = 24/345 (6%)
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
++ A + +WARP L S+ + FQQ++ E L+ G A+ ++FG
Sbjct: 87 KESNAEKDQQWARPSLDDFDASR-DVLCFQQIEA---------EEGTLAGGRTAV-KLFG 135
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT GHSV V F Y Y++ P P D F LE ++ E ++ + + ++
Sbjct: 136 VTENGHSVLLHVTHFLHYLYVAAPVSFVPTDCEGFKAYLEAQL-EFHQPA-----IHSVQ 189
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGI-QLDGL---GMKSFMTYESN 240
MV + ++ +Q + P+LKI V P + R ++ G G+ + +T++ N
Sbjct: 190 MVMRENLFGFQGNQKSPYLKITVTDPRHINKLRTTIENGAANYKGMWRGDVDGILTFD-N 248
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFSK 298
+ + LRFMID I G +W+E P KY T +S CQ+E Y D+I+ +GE++K
Sbjct: 249 IEYILRFMIDTGISGMSWVEAPASKYELLPLTERVSNCQIEASIHYRDLIAHPNDGEWAK 308
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGV 358
MAP RILSFDIECAGRKG FPE DPVIQ+AN+VT GE +PF+RNV L +C+ IV
Sbjct: 309 MAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESKPFVRNVFVLDTCSLIVNT 368
Query: 359 DVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ F+TE +L+AW++F+ EVDPDV+IGYNI FD PYLI++ +
Sbjct: 369 QILEFDTEERMLMAWKEFLVEVDPDVIIGYNIANFDFPYLIKRAE 413
>gi|119175148|ref|XP_001239851.1| hypothetical protein CIMG_09472 [Coccidioides immitis RS]
gi|392870043|gb|EAS28595.2| DNA polymerase (pol2) [Coccidioides immitis RS]
Length = 1110
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/621 (62%), Positives = 495/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 487 QKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 546
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA +++LVIPN+K E+ Y+GATV+E +Y+ PIATLD
Sbjct: 547 FLLSRGQQVKFISQLFRKALEQDLVIPNLKNENGEE-QYKGATVIEPVKDYYDVPIATLD 605
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KLNL E TP+G+ F S ++KG+L +IL+
Sbjct: 606 FASLYPSIIQAHNLCYTTLLNKTSVEKLNLKKDEDYIVTPNGDMFCTSKVRKGLLSQILQ 665
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGA+ G+LPC+ I+SS T
Sbjct: 666 ELLSARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGITGASNGKLPCLAIASSTT 725
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMI TK VE +FT GY ++A+VIYGDTDSVMV+FGV + AMKLG+EAAD+
Sbjct: 726 SYGRQMIMKTKDEVEARFTMANGYPYDAKVIYGDTDSVMVKFGVKDIAEAMKLGQEAADF 785
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F++PIKLEFEKVY+PYLLI+KKRYAGL+WTNP KFDKMD+KGIETVRRDNC LV+
Sbjct: 786 VSAKFLEPIKLEFEKVYFPYLLINKKRYAGLFWTNPNKFDKMDSKGIETVRRDNCRLVQT 845
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L KIL+DRD+ GA YVK TI+DLL N++D+S LVITK L+K+ DY K AHVE
Sbjct: 846 VIETVLKKILIDRDVNGAESYVKDTIADLLQNKVDMSKLVITKALSKS--DYSAKQAHVE 903
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+NQ+
Sbjct: 904 LAERMRKRDVGSAPTLGDRVAYVIVKGATGSKNYEKSEDPIYVLENNIPIDTKYYLDNQL 963
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+KPL RIF+PIL + S +LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK + +
Sbjct: 964 AKPLARIFDPILGERRSAQLLTGEHTRSISVAAPTLGGLMKFAKKTQTCMGCKKPLVDKD 1023
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +C +C+ R ELY KT+++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1024 EKEGAVCENCRPRLGELYSKTLNKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIF 1083
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A+ +L R++
Sbjct: 1084 YMRMKAKKDVEDAERELARFD 1104
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/412 (36%), Positives = 221/412 (53%), Gaps = 48/412 (11%)
Query: 13 PPTPKESWPNKQQATTP---TTPVIDDEFLD-----------EDVFLDETL--LPEDEES 56
P +P + K +A P T P + D F + F++E L L +D
Sbjct: 25 PVSPNATKKRKLEADQPSIITRPRLQDGFRKAATPASSQSQHKSKFVEEVLEKLTQDISG 84
Query: 57 LILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGS 116
L + E+ Q +W RP L + S+ FQQ++ E P S G
Sbjct: 85 LKESNAEKDQ-------QWERPSLDD-FDPMRDSLCFQQIEA---------EEGPFS-GD 126
Query: 117 AAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKV 176
+R+FGVT GHSV V F+ Y Y++ P D F LE + N +
Sbjct: 127 QTAVRLFGVTETGHSVLLHVTDFKHYLYVAAPVSFTKSDCEPFGAYLENHV--GNHQT-- 182
Query: 177 PQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGL----GM 231
+ +++MV K +++ +Q + P+L+I V P + R ++ G GL G
Sbjct: 183 --VIHNVQMVMKENLLGFQGNQQHPYLRITVTDPKYINRVRSTIESGNANYRGLWKVGGT 240
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSY--CQLEFDCLYSDIIS 289
+T++ N+ + LRFMID I G +W+EVP KYR + Y CQ+E Y D+I+
Sbjct: 241 DGILTFD-NIQYILRFMIDTGISGMSWVEVPPSKYRIVPEHQRYSNCQIEAVVHYRDLIA 299
Query: 290 RHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTL 349
+GE++KMAP RILSFDIECAGRKG FPE DPVIQ+AN+VT GE +PF+RNV L
Sbjct: 300 HPHDGEWAKMAPLRILSFDIECAGRKGIFPEAHEDPVIQIANVVTRYGESKPFVRNVFVL 359
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
C+ IV ++ F+TE+++L+AWR+F+ +VDPDV+IGYNI FD PYL+++
Sbjct: 360 NGCSLIVNTQILDFKTEQEMLMAWREFLEKVDPDVIIGYNIANFDFPYLLDR 411
>gi|380488089|emb|CCF37614.1| DNA polymerase delta catalytic subunit [Colletotrichum higginsianum]
Length = 1103
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/622 (62%), Positives = 492/622 (79%), Gaps = 10/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTG+P +
Sbjct: 479 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGIPFN 538
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA ++ LVIPN++ GS++ YEGATV+E G+Y+ P+ATLD
Sbjct: 539 FLLSRGQQVKFISQLFRKALEQKLVIPNMRSEGSDE-QYEGATVIEPTRGYYDVPVATLD 597
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TLV + K L E TP+G+TFV + +KG+L +ILE
Sbjct: 598 FASLYPSIMQAHNLCYTTLVNKKAIEKFQLKKDEDYIVTPNGDTFVTNKQRKGLLAQILE 657
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARK+AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS T
Sbjct: 658 ELLSARKQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLEIASSTT 717
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMI TK+ VE K+ GY H+A+VIYGDTDSVMV+FG + AMKLG EAA++
Sbjct: 718 SFGRQMIMKTKEEVEKKYCIANGYSHDAQVIYGDTDSVMVKFGTKDLPEAMKLGEEAANH 777
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVYYPYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 778 VSSKFVKPIKLEFEKVYYPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQT 837
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+D+D+ GA YVK TI+DLL N++D+S LVITK LTK DDY K AHVE
Sbjct: 838 VIEKVLRMILIDQDVQGAQDYVKDTIADLLQNKVDMSKLVITKALTK--DDYAAKQAHVE 895
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV+IK G+K YE+SEDPIYVLENN+PIDT YYL+NQ+
Sbjct: 896 LAQRMKKRDAGSAPGLGDRVAYVMIKGPAGSKNYEKSEDPIYVLENNVPIDTRYYLDNQL 955
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + + LL+G HTR+I++S P+ G+MKFAK+ +C+GCK +
Sbjct: 956 AKPLGRIFEPILGETKANSLLTGAHTRTIAVSAPTVGGLMKFAKKTQTCMGCKKPLRGKE 1015
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
S G +CS C R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1016 ESAGAVCSDCAPRVGELYKKTLDKVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1075
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A +L R++F
Sbjct: 1076 YMRMKAKKDLEDAGKELTRFDF 1097
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 139/360 (38%), Positives = 204/360 (56%), Gaps = 33/360 (9%)
Query: 55 ESLILRDIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
ES +L + Q +Q+ + W RPPL + +++FQQ++ + G +
Sbjct: 64 ESEVLEKLSQDIADRKQNNTEKDQAWERPPLVD-FNPARDNLIFQQIEAEE--GSLH--- 117
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
G A +++FGVT +GHSV V F+ Y Y++ P P+D + F LE
Sbjct: 118 -----GGRATVKLFGVTEKGHSVMLHVTDFKHYLYVAAPVAFRPEDCNAFKAYLE----- 167
Query: 170 ANRNSKVPQF---VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQ 225
S+V Q + + + + +I +Q P+LKI V P ++ R ++ G
Sbjct: 168 ----SQVAQHQPCIHSVAFLMRENIYGFQGNVKSPYLKITVMDPKFISRVRTTIESGNAN 223
Query: 226 LDGL--GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFD 281
GL GM + N+ F LRFM+DC I G +W+E P KY+ + S CQ+E +
Sbjct: 224 WKGLWKGMDGGVMTFDNIQFVLRFMVDCKIFGMSWVEAPATKYQVIPQPQRQSNCQIEAE 283
Query: 282 CLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQP 341
Y D+I+ P GE+SKMAP RI+SFDIECAGRKG FPE THDPVIQ+AN+VT GEK+P
Sbjct: 284 ISYLDLIAHKPVGEWSKMAPLRIMSFDIECAGRKGIFPEATHDPVIQIANVVTRYGEKKP 343
Query: 342 FIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
F+RNV L + +PIV ++ F+ E +L W+ F+ +VDPD++IGYNI FD PYL+++
Sbjct: 344 FVRNVFCLDTTSPIVATQILDFQKEEKMLSEWQKFLIKVDPDILIGYNIANFDFPYLLDR 403
>gi|156041052|ref|XP_001587512.1| hypothetical protein SS1G_11504 [Sclerotinia sclerotiorum 1980]
gi|154695888|gb|EDN95626.1| hypothetical protein SS1G_11504 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1106
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/622 (63%), Positives = 489/622 (78%), Gaps = 10/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLAVYCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 483 QKEDVHHTMITELFNGTPESRRRLAVYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA ++ LVIPN+ A SE+ YEGATV+E G+Y PIATLD
Sbjct: 543 FLLSRGQQVKFISQLFRKALEQKLVIPNLSTASSEE-QYEGATVIEPTRGYYSVPIATLD 601
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ + LNL E TP+G+ FV + +KG+L +ILE
Sbjct: 602 FASLYPSIIQAHNLCYTTLLKKDVVEALNLEKDEDYIVTPNGDMFVTTKQRKGLLTQILE 661
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARK+AK +L DP +KAVL+GRQLALKISANSVYG TGATVG++PC+ I+SS T
Sbjct: 662 ELLTARKQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKVPCLPIASSTT 721
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK VE K+T GY H+A+VIYGDTDSVMV+FGV + AMKLG EAA Y
Sbjct: 722 SYGRQMIEKTKAEVEAKYTIANGYSHDAQVIYGDTDSVMVKFGVKELTEAMKLGEEAAQY 781
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVYYPYLLI+KKRYAGLYWTNP+K+DKMDTKGIETVRRDNC LV+N
Sbjct: 782 VSSKFIKPIKLEFEKVYYPYLLINKKRYAGLYWTNPDKYDKMDTKGIETVRRDNCRLVQN 841
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L IL+D+D+ GA YVK TISDLL N++D+S LVITK L K DY K AHVE
Sbjct: 842 VIETVLRMILIDQDVQGAQDYVKDTISDLLQNKIDMSKLVITKALAKA--DYTAKQAHVE 899
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRDA +AP +GDRV YVIIK + GAK +ERSEDPI+VLENN+PIDT YYL+NQ+
Sbjct: 900 LAERMKKRDAGSAPTLGDRVAYVIIKGSAGAKNFERSEDPIFVLENNVPIDTKYYLDNQL 959
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + + LL+G HTR+IS++ P+ G+MKFAK+ +C+ CK +
Sbjct: 960 AKPLGRIFEPILGETKANSLLAGAHTRAISVAAPTIGGLMKFAKKTSTCMSCKKPLVKSH 1019
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+G +C+ C R E+Y K +++V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1020 EKDGAVCTDCAPRIGEMYQKQLNKVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1079
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A +L+R++F
Sbjct: 1080 YMRMKAKKDVEDAGKELERFDF 1101
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 200/367 (54%), Gaps = 35/367 (9%)
Query: 51 PEDEESLIL----RDIEQ-RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDS 105
P ES +L +DIE +++ + + +WARP LS + + +++FQQ++ + D
Sbjct: 64 PSQFESEVLEKMTQDIESLKKNNSEKDQEWARPSLSD-FNPEEDNLIFQQIECEEGTYDH 122
Query: 106 NRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEG 165
+ A +++FGVT GHSV V F Y Y++ P D + L+
Sbjct: 123 GK----------ATVKLFGVTETGHSVMLHVQDFLHYLYVAAPVNFTHKDCEQYRMYLDS 172
Query: 166 RMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-- 223
+ P + + +V + ++ + K ++K+ V P + R ++ G
Sbjct: 173 HV-----GMHTPA-IHSVSVVLRENLYGFTGNKQHAYIKVTVTDPRYINKVRTTIEEGRA 226
Query: 224 -----IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK--TLSYC 276
+ DG G+ +F ++ + LRFM+D I G +W+EV KY + S C
Sbjct: 227 NWKGMWRNDGNGILTF----DSIQYVLRFMVDVKIHGMSWVEVEAKKYTIVPEHNRQSNC 282
Query: 277 QLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQ 336
Q+E Y D+I+ PEGE++KMAP RILSFDIECAGRKG FPE DPVIQ+AN+VT
Sbjct: 283 QIEAVTSYRDLIAHKPEGEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANIVTRY 342
Query: 337 GEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLP 396
GEK+PF+RNV L + + IV + F+ E +L WRDF+ EVDPD++IGYNI FD P
Sbjct: 343 GEKKPFVRNVFCLDTTSLIVNTQIFEFDKEEKMLSKWRDFLEEVDPDIIIGYNIANFDFP 402
Query: 397 YLIEKED 403
YL+++ D
Sbjct: 403 YLLDRAD 409
>gi|310792587|gb|EFQ28114.1| DNA polymerase family B [Glomerella graminicola M1.001]
Length = 1103
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/622 (62%), Positives = 490/622 (78%), Gaps = 10/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTG+P +
Sbjct: 479 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGIPFN 538
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA ++ LVIPN++ G+++ YEGATV+E G+Y+ PIATLD
Sbjct: 539 FLLSRGQQVKFISQLFRKALEQKLVIPNMRSEGTDE-QYEGATVIEPTRGYYDVPIATLD 597
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TLV + K L + TP+G+TFV + +KG+L +ILE
Sbjct: 598 FASLYPSIMQAHNLCYTTLVNKKAIEKFQLKKDDDYIVTPNGDTFVTTKQRKGLLAQILE 657
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARK+AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS T
Sbjct: 658 ELLTARKQAKRELAMETDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLEIASSTT 717
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMI TK+ VE K+ GY H+A+VIYGDTDSVMV+FG + AMK G EAA Y
Sbjct: 718 SFGRQMIMKTKEEVEKKYCIANGYSHDAQVIYGDTDSVMVKFGTKDLPEAMKFGEEAAAY 777
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVYYPYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 778 VSSKFVKPIKLEFEKVYYPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQT 837
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+D+D+ GA YVK TI+DLL N++D+S LVITK LTK DDY K AHVE
Sbjct: 838 VIEKVLRMILIDQDVQGAQDYVKDTIADLLQNKVDMSKLVITKALTK--DDYAAKQAHVE 895
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV+IK A G+K YE+SEDPIYVLENN+PIDT YYL+NQ+
Sbjct: 896 LAQRMKKRDAGSAPGLGDRVAYVMIKGAAGSKNYEKSEDPIYVLENNVPIDTKYYLDNQL 955
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + + LL+G HTR+I++S P+ G+MKFAK+ +C+GCK +
Sbjct: 956 AKPLGRIFEPILGETKANSLLTGAHTRTIAVSAPTVGGLMKFAKKTQTCMGCKKPLRGKE 1015
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
S G +CS C R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1016 ESEGAVCSDCAPRVGELYKKTLDKVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1075
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A +L R++F
Sbjct: 1076 YMRMKAKKDLEDAGKELTRFDF 1097
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 205/360 (56%), Gaps = 33/360 (9%)
Query: 55 ESLILRDIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
ES +L + Q +Q+ + W RPPL + +++FQQ++ + G +
Sbjct: 64 ESEVLEKLSQDIADRKQNNTEKDQAWERPPLVD-FDPARDNLIFQQIEAEE--GSLH--- 117
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
G A +++FGVT +GHSV V F+ Y Y++ P P+D + F LE
Sbjct: 118 -----GGRATVKLFGVTEKGHSVMLHVTDFKHYLYVAAPVAFRPEDCNAFKAYLE----- 167
Query: 170 ANRNSKVPQF---VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQ 225
S+V Q + + + + +I +Q P+LKI V P ++ R ++ G
Sbjct: 168 ----SQVAQHQPCIHSVAFLMRENIYGFQGNVKSPYLKITVMDPKFISRVRTTIESGNAN 223
Query: 226 LDGL--GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFD 281
G+ GM + N+ + LRFM+DC I G +W+E P KY+ ++ S CQ+E +
Sbjct: 224 WKGMWKGMDGGVMTFDNIQYVLRFMVDCKIFGMSWVEAPASKYQVLPQSQRQSNCQIEAE 283
Query: 282 CLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQP 341
+ D+I+ P GE+SKMAP RI+SFDIECAGRKG FPE THDPVIQ+AN+VT GEK+P
Sbjct: 284 ISHLDLIAHKPVGEWSKMAPLRIMSFDIECAGRKGIFPEATHDPVIQIANVVTRYGEKKP 343
Query: 342 FIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
F+RNV L + +PIV ++ FE E +L W+ F+ +VDPD++IGYNI FD PYL+++
Sbjct: 344 FVRNVFCLDTTSPIVATQILDFEKEEKMLSEWQKFLIKVDPDILIGYNIANFDFPYLLDR 403
>gi|378726376|gb|EHY52835.1| DNA polymerase delta subunit 1 [Exophiala dermatitidis NIH/UT8656]
Length = 1107
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/621 (62%), Positives = 493/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 483 QKEDVHHTMITELFNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +K +SQL RKA ++ LVIPN + S++ YEGATV+E G+Y+ PIATLD
Sbjct: 543 YLLSRGQQVKFISQLFRKALEQQLVIPNERSEKSDE-QYEGATVIEPIRGYYDVPIATLD 601
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+T + K N+ E TP+G+ F + ++KG+L +ILE
Sbjct: 602 FASLYPSIIQAHNLCYTTLLTKQIIEKHNMKKDEDYILTPNGDLFATAKVRKGLLTQILE 661
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARKRAK +L KDP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS T
Sbjct: 662 ELLGARKRAKRELAVEKDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTT 721
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK VE K+T GY H+A+VIYGDTDSVMV+FG + M+LG+EAAD+
Sbjct: 722 AYGRQMIEKTKHEVEQKYTIANGYSHDAQVIYGDTDSVMVKFGEKDLRKVMELGQEAADF 781
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWTNP+K+DKMDTKGIETVRRDNC LV+
Sbjct: 782 VSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTNPDKYDKMDTKGIETVRRDNCRLVQV 841
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L KIL+DRD+ GA YVK TI++LL N++DLS+LVITK L+K+ DY K AHVE
Sbjct: 842 VIETVLRKILIDRDLDGAQDYVKETIANLLQNKVDLSMLVITKALSKS--DYTAKQAHVE 899
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENN+PIDT YYL+NQ+
Sbjct: 900 LAERMKKRDAGSAPALGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNVPIDTKYYLDNQL 959
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+ PL RIFEPIL + + LL+GDHTRSIS++ P+ G+MKFAK+ ++C+GCK +
Sbjct: 960 ANPLGRIFEPILGERRANSLLAGDHTRSISVAAPTLGGLMKFAKKTMTCMGCKKPLVRPD 1019
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+G +C +C+ R ELY K + +V ELEV F RLWTQCQ CQGS+H +VLC+SRDCPIF
Sbjct: 1020 EKDGAVCENCRPRIGELYTKQIKKVGELEVRFNRLWTQCQRCQGSMHSEVLCSSRDCPIF 1079
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+K++ E +L R++
Sbjct: 1080 YMRMKARKEVEEGGRELARFD 1100
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/335 (39%), Positives = 191/335 (57%), Gaps = 26/335 (7%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+W RP L + + ++ FQQ++I E L GS A+ ++FGV+ GHS+
Sbjct: 92 QWDRPSLDD-FDPKRDALCFQQIEI---------EEGSLHGGSTAL-KLFGVSETGHSIL 140
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
V F Y Y++ P DI + LE ++ + + ++MV + ++
Sbjct: 141 LHVTDFLHYLYVAAPVNFQRHDIEGYKAYLESQLAQHQ------PAIHSVQMVLRENLYG 194
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM-----KSFMTYESNVLFALRFM 248
+Q + P+LKI V P + R ++ G + GM TY+ N+ + LRFM
Sbjct: 195 FQGNQKSPYLKITVNDPKFIGRLRSAIEEG-NANYKGMWNVEKNKIKTYD-NIQYVLRFM 252
Query: 249 IDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILS 306
ID I G +W+EVP KY + S CQ+E C Y D+I+ +GE++KMAP RILS
Sbjct: 253 IDTGITGMSWVEVPPQKYHVLPSYDRQSNCQIEASCHYRDLIAHGHDGEWAKMAPLRILS 312
Query: 307 FDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETE 366
FDIECAGRKG FPE DPVIQ+AN+VT G+ +PFIRNV L +C+ IV + ++E
Sbjct: 313 FDIECAGRKGIFPEANQDPVIQIANVVTKYGDSKPFIRNVFVLDTCSLIVNTQIYEHDSE 372
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L+AWRDF+ +VDPDV+IGYNI FD PYL+++
Sbjct: 373 SKMLMAWRDFLEKVDPDVIIGYNIANFDFPYLLDR 407
>gi|427792855|gb|JAA61879.1| Putative dna polymerase type-b family, partial [Rhipicephalus
pulchellus]
Length = 1003
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/617 (63%), Positives = 488/617 (79%), Gaps = 8/617 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNG +TRRRLAVYCLKDA LP RLLDKLM + NY+EMARVTGVP++
Sbjct: 386 QKEDVQHSIITDLQNGTDQTRRRLAVYCLKDAMLPLRLLDKLMSVINYMEMARVTGVPMT 445
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQLLRKA +++LV+P V E +EGATV+E GFY PIATLD
Sbjct: 446 YLLSRGQQIKVVSQLLRKAAEQDLVMPVVHSEAGED--FEGATVIEPVKGFYSVPIATLD 503
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+T++ ++ ++ L P+ +TPSG+ FVK++++KG+LPEILE+
Sbjct: 504 FSSLYPSIMMAHNLCYTTVL--DNRQRELLKPDQFIRTPSGDHFVKASVRKGLLPEILED 561
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAK DLK DP K VLDGRQLALKISANSVYGFTGA VG+LPC+ IS SVT+
Sbjct: 562 LLSARKRAKTDLKNETDPFRKKVLDGRQLALKISANSVYGFTGAQVGKLPCLAISKSVTA 621
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MIE TK+ VE ++T GYEH+A+VIYGDTDSVM++FG ++E AM+LGREAA Y+
Sbjct: 622 FGRTMIEKTKQEVEARYTRANGYEHDAKVIYGDTDSVMIRFGTNSLEKAMELGREAATYV 681
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ F++PI LEFEKVYYPYLLI+KKRYAGL +T PE +DKMD KGIETVRRDNC LV NL
Sbjct: 682 TAKFVRPINLEFEKVYYPYLLINKKRYAGLLYTRPETYDKMDCKGIETVRRDNCPLVANL 741
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL +IL++RD GAV++ K TI+DLL NR+D+S LVITK LTK +Y K AHVEL
Sbjct: 742 INTCLERILINRDPDGAVEFAKQTIADLLCNRVDISQLVITKELTKNDGEYAAKQAHVEL 801
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A RMRKRDA +APN+GDRVPYVI+ A+KG AY +SEDP+YVLE+++PIDT YYLENQ+S
Sbjct: 802 AHRMRKRDAGSAPNLGDRVPYVIVAASKGTAAYLKSEDPMYVLEHSVPIDTQYYLENQLS 861
Query: 880 KPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--SN 935
KPLLRIFEPIL + E LL GDHTR+ ++ + F K++ +CIGC+A++ N
Sbjct: 862 KPLLRIFEPILGESKAESVLLHGDHTRTKTVVHSKVGALAAFTKKKSTCIGCRAVLEDQN 921
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C HCK +EAE+Y V+ + LE F +LWTQCQ C GSLH++VLCTSRDCPIFY R
Sbjct: 922 SAVCKHCKTKEAEIYLVEVNHLSSLESKFSQLWTQCQRCSGSLHEEVLCTSRDCPIFYMR 981
Query: 996 KKAQKDMAEAKLQLDRW 1012
KK QKD+A+ + + R+
Sbjct: 982 KKVQKDLADQEKVVQRF 998
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/310 (45%), Positives = 200/310 (64%), Gaps = 5/310 (1%)
Query: 97 DIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI 156
D+D+ +G+ + +S G I+R+FGVT +GHSV C VHGF PYFY+ P +
Sbjct: 1 DLDHYLGEPLPGMPGMSRGPIPIVRMFGVTDDGHSVLCHVHGFLPYFYVEAPPNFRKEHC 60
Query: 157 SHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVA 214
F + L + + R++K + V I+MV K+SI Y + PFLK+ + LP ++A
Sbjct: 61 WTFREALNKAVLKDMRSNKNQLTDTVVGIDMVLKQSIYGYNSKGKTPFLKVTMVLPRLIA 120
Query: 215 SCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAK 271
+ +L+ G + +D G S+ +ESNV F +RFM+D ++VG WIE+P GKY R
Sbjct: 121 PAKRLLETGSVTVDPYGAPSYRIFESNVDFEIRFMVDTHVVGCCWIELPRGKYKVRDERT 180
Query: 272 TLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVAN 331
+S Q+E D + ++++ PEG ++++AP RILSFDIECAGRKG FPEP D VIQ+AN
Sbjct: 181 RVSRAQIEVDVAWDEMVAHAPEGTWARVAPLRILSFDIECAGRKGIFPEPEKDSVIQIAN 240
Query: 332 LVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNIC 391
+V QGEK PFIRNV TL +C I G +V+ F+ ER++L W DF+REVDPD++ GYNI
Sbjct: 241 MVMRQGEKDPFIRNVFTLNTCTSIAGCEVLCFQFERELLKRWSDFLREVDPDIITGYNIQ 300
Query: 392 KFDLPYLIEK 401
FD PYL+ +
Sbjct: 301 NFDFPYLMNR 310
>gi|302497097|ref|XP_003010549.1| Catalytic subunit of DNA polymerase delta [Arthroderma benhamiae CBS
112371]
gi|291174092|gb|EFE29909.1| Catalytic subunit of DNA polymerase delta [Arthroderma benhamiae CBS
112371]
Length = 1111
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/621 (63%), Positives = 490/621 (78%), Gaps = 9/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 487 QKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 546
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ IK +SQL RKA ++ LVIP++K + YEGATV+E +Y PIATLD
Sbjct: 547 FLLARGQQIKFISQLFRKALEQKLVIPDLKNDDNSNQQYEGATVIEPVRDYYPVPIATLD 606
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL++ KL L E TP+ + F + ++KG+L +ILE
Sbjct: 607 FASLYPSIIQAHNLCYTTLLSKRTVEKLGLKKGEDYIVTPNDDMFCTAKIRKGLLSQILE 666
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARKRAK +L KDP +KAVL+GRQLALKISANSVYG TGAT G+LPC+ I+SS T
Sbjct: 667 ELLTARKRAKRELAVEKDPFKKAVLNGRQLALKISANSVYGITGATNGKLPCLPIASSTT 726
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK VE ++T GY H+A+VIYGDTDSVMV+FG + AMKLG EAA +
Sbjct: 727 SYGRQMIEKTKDEVEARYTISNGYTHDAKVIYGDTDSVMVKFGTTDLAEAMKLGEEAAGF 786
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVYYPYLLI+KKRYAGLYWTNP K+DKMDTKGIETVRRDNCLLV+
Sbjct: 787 VSSKFMKPIKLEFEKVYYPYLLINKKRYAGLYWTNPVKYDKMDTKGIETVRRDNCLLVQT 846
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L+KIL+DR++ GA YVK+ ISDLL N++D+S LVITK LTK ++Y K AHVE
Sbjct: 847 VIETVLNKILIDRNVSGAETYVKNIISDLLQNKVDMSKLVITKALTK--EEYTGKQAHVE 904
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L ERMRKRDA +AP +GDRV YVI+ A GAK YE+SEDPIYVLENNIPIDT YYLENQ+
Sbjct: 905 LVERMRKRDAGSAPTLGDRVAYVIVGGATGAKNYEKSEDPIYVLENNIPIDTRYYLENQL 964
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + + +LL GDHTRSI+++ P+ G+MKFAK+ +C+GCK +
Sbjct: 965 AKPLTRIFEPILGEKKAAQLLKGDHTRSITVAAPTLGGLMKFAKKTQTCMGCKKPLVGKE 1024
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+G +CS+C+ R ELY +T+++V ELEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1025 EMSGAVCSNCRPRLGELYTRTLNKVSELEVRFGRLWTQCQRCQGSLHGEVICSSRDCPIF 1084
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +++ +L R++
Sbjct: 1085 YMRMKAKKDVEDSEKELARFD 1105
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 205/356 (57%), Gaps = 24/356 (6%)
Query: 52 EDEESLILRDI-EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL 110
ED + +DI + +++ A + KW RP L G+ ++ FQQ+D+ E
Sbjct: 74 EDVLEKLTQDIGDLKENNAEKDQKWERPSLD-GFDPSRDNLCFQQIDV---------EEG 123
Query: 111 PLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA 170
L+ G+A +++FGVT G+SV V GF Y YI+ P D F LE
Sbjct: 124 YLAGGTA--VKLFGVTENGNSVLLHVTGFMHYLYIAAPVAFTQADCVPFKAYLE------ 175
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG-ILDRGIQLDGL 229
N+ S + ++M + ++ +Q + P+LKI V P + + R I+ G+
Sbjct: 176 NQLSVTEPVIHSVQMTMRENLYEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGM 235
Query: 230 --GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYS 285
G++ + N+ + LRFMID I G +W+EVP KY + S CQ+E Y
Sbjct: 236 WKGIEGEILTFDNIQYLLRFMIDTGISGMSWVEVPAAKYEVLPPGQCQSNCQIEASVHYR 295
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRN 345
D+I+ +GE++KMAP RILSFDIECAGRKG FPEP DPVIQ+AN+VT GE +PF+RN
Sbjct: 296 DMIAHPNDGEWAKMAPLRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKPFVRN 355
Query: 346 VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V + +C+ IV V+ F+ E ++L+AWRDF+ +VDPDV+IGYNI FD PYL+++
Sbjct: 356 VFVMDTCSSIVNTQVLEFDKEENMLMAWRDFVEKVDPDVIIGYNIANFDFPYLLDR 411
>gi|327300054|ref|XP_003234720.1| DNA polymerase subunit delta large [Trichophyton rubrum CBS 118892]
gi|326463614|gb|EGD89067.1| DNA polymerase subunit delta large [Trichophyton rubrum CBS 118892]
Length = 1111
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/621 (63%), Positives = 492/621 (79%), Gaps = 9/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 487 QKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 546
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ IK +SQL RKA ++ LVIP++K + YEGATV+E +Y PIATLD
Sbjct: 547 FLLARGQQIKFISQLFRKALEQKLVIPDLKNDDNSNQQYEGATVIEPVRDYYPVPIATLD 606
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL++ KL L E TP+ + F + ++KG+L +ILE
Sbjct: 607 FASLYPSIIQAHNLCYTTLLSKRTVEKLGLKKGEDYIVTPNDDMFCTAKVRKGLLSQILE 666
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARKRAK +L KDP +KAVL+GRQLALKISANSVYG TGAT G+LPC+ I+SS T
Sbjct: 667 ELLAARKRAKRELAVEKDPFKKAVLNGRQLALKISANSVYGITGATNGKLPCLPIASSTT 726
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++T GY H+A+VIYGDTDSVMV+FG + AMKLG EAA +
Sbjct: 727 SYGRQMIEKTKEEVEARYTISNGYTHDAKVIYGDTDSVMVKFGTTDLAEAMKLGEEAAGF 786
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVYYPYLLI+KKRYAGLYWTNP K+DKMDTKGIETVRRDNCLLV+
Sbjct: 787 VSSKFMKPIKLEFEKVYYPYLLINKKRYAGLYWTNPVKYDKMDTKGIETVRRDNCLLVQT 846
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L+KIL++R++ GA YVK+ ISDLL N++D+S LVITK LTK ++Y K AHVE
Sbjct: 847 VIETVLNKILIERNVSGAETYVKNIISDLLQNKVDMSKLVITKALTK--EEYTGKQAHVE 904
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L ERMRKRDA +AP +GDRV YVI+ A GAK YE+SEDPIYVLENNIPIDT YYLENQ+
Sbjct: 905 LVERMRKRDAGSAPTLGDRVAYVIVGGATGAKNYEKSEDPIYVLENNIPIDTRYYLENQL 964
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + + +LL GDHTRSI+++ P+ G+MKFAK+ +C+GCK +
Sbjct: 965 AKPLTRIFEPILGEKKAAQLLKGDHTRSITVAAPTLGGLMKFAKKTQTCMGCKKPLVGKE 1024
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+G +CS+C+ R ELY +T+++V ELEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1025 EMSGAVCSNCRPRLGELYTRTLNKVSELEVRFGRLWTQCQRCQGSLHGEVICSSRDCPIF 1084
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +++ +L R++
Sbjct: 1085 YMRMKAKKDVEDSEKELARFD 1105
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 205/356 (57%), Gaps = 24/356 (6%)
Query: 52 EDEESLILRDI-EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL 110
ED + +DI + +++ A + KW RPPL G+ S+ FQQ+D+ E
Sbjct: 74 EDVLEKLTQDIGDLKENNAEKDQKWERPPLD-GFDPSRDSLCFQQIDV---------EEG 123
Query: 111 PLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA 170
L+ G+A +++FGV+ G+SV V GF Y YI+ P D F LE
Sbjct: 124 YLAGGTA--VKLFGVSENGNSVLLHVTGFMHYLYIAAPVSFTQADCVPFKAYLE------ 175
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG-ILDRGIQLDGL 229
N+ S + ++M + ++ +Q + P+LKI V P + + R I+ G+
Sbjct: 176 NQLSVTEPVIHSVQMTMRENLYEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGM 235
Query: 230 --GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYS 285
G++ + N+ + LRFMID I G +W+EVP KY + S CQ+E Y
Sbjct: 236 WKGIEGEILTFDNIQYLLRFMIDTGISGMSWVEVPAAKYEVLPPGQCQSNCQIEASVHYR 295
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRN 345
D+ + +GE++KMAP RILSFDIECAGRKG FPEP DPVIQ+AN+VT GE +PF+RN
Sbjct: 296 DMTAHPNDGEWAKMAPLRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKPFVRN 355
Query: 346 VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V + +C+ IV V+ F+ E ++L+AWRDF+ +VDPDV+IGYNI FD PYL+++
Sbjct: 356 VFVMDTCSSIVNTQVLEFDKEENMLMAWRDFVEKVDPDVIIGYNIANFDFPYLLDR 411
>gi|406607376|emb|CCH41280.1| DNA polymerase delta catalytic subunit [Wickerhamomyces ciferrii]
Length = 1108
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/619 (62%), Positives = 492/619 (79%), Gaps = 8/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KE+V HSII+DLQNGN+ETRRRLAVYCLKDAYLP RLL+KLM + NY EMARVTGVP S
Sbjct: 489 QKEEVQHSIITDLQNGNSETRRRLAVYCLKDAYLPMRLLEKLMCLVNYTEMARVTGVPFS 548
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ IKV+SQL RK + +LV+PN++Q GS YEGATV+E G+Y+ PIATLD
Sbjct: 549 FLLTRGQQIKVISQLFRKCLEIDLVVPNLQQGGSSDVQYEGATVIEPHRGYYDVPIATLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ +L L + +PSG+ FVK++ +KGILP ILE
Sbjct: 609 FSSLYPSIMMAHNLCYTTLLNKPTIERLKLEKDKDYTVSPSGDFFVKTSQRKGILPIILE 668
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARK+AK D+K DP ++ VL+GRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT
Sbjct: 669 ELLSARKKAKKDMKTETDPFKRDVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSVT 728
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GR MIE TK+ V+DK+T GY++++EVIYGDTDSVMV+FG +E MKLG EAAD+
Sbjct: 729 AFGRGMIEKTKQEVQDKYTIANGYDYDSEVIYGDTDSVMVKFGYKDLETCMKLGEEAADF 788
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+ PIKLEFEKVY+PYLLI+KKRYAGLYWTN EKFDKMDTKGIETVRRDNC LV N
Sbjct: 789 VSTKFLNPIKLEFEKVYFPYLLINKKRYAGLYWTNTEKFDKMDTKGIETVRRDNCRLVSN 848
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++T+ L IL RD+ A +VK TI+DLL +R+D+ LVITK L+++ DY K HVE
Sbjct: 849 VITKILELILEKRDVKSAENFVKQTIADLLQDRVDMQQLVITKALSRS--DYANKQPHVE 906
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RMRKRDA +AP +GDRV YVIIK A G K+YE+SEDP+YVLE+N+PID+ YYLENQ+
Sbjct: 907 LADRMRKRDAGSAPTIGDRVAYVIIKTA-GNKSYEKSEDPLYVLEHNLPIDSKYYLENQL 965
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---S 934
+ PL RIFEPIL + +KELL+G HTR++++++ + G+M+F K+ +C GCK + +
Sbjct: 966 ANPLTRIFEPILGEKKAKELLTGSHTRTVTMASATTGGLMRFVKKVETCKGCKNPLPKNN 1025
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+G LC +CK + +LY + ++ + L+V F RLWT CQ CQGSLHQDVLC+++DCPIFY
Sbjct: 1026 HGALCDNCKPKAGKLYSEALAGMNALQVKFARLWTNCQRCQGSLHQDVLCSNKDCPIFYM 1085
Query: 995 RKKAQKDMAEAKLQLDRWN 1013
RKKAQKD+ L+L +WN
Sbjct: 1086 RKKAQKDVIAQSLELQKWN 1104
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 192/333 (57%), Gaps = 28/333 (8%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W RP L + + I FQQLD + L+ GS+A+ R FGVT+EG+SV C
Sbjct: 103 WERPTLPVDWKPETHDITFQQLDAEEA----------LTEGSSAV-RFFGVTQEGYSVLC 151
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V GF YFY+ P + + F L+ + V IE+ K SI +
Sbjct: 152 NVTGFLHYFYVPAPLNFRKEHLLSFKNYLQQSF----------EGVLDIELCFKESIWGF 201
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGL---GMKSFMTYESNVLFALRFMID 250
+ FLKI+ + R ++G + +G+ MTY+ N+ + LR MID
Sbjct: 202 NGNQKVCFLKIIGVNAKDIPKIRSGFEKGMVSWNGMFNSNGDGTMTYD-NIQYLLRLMID 260
Query: 251 CNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
C I G +WI +P G Y +T S CQLE + Y +IS PEGE+ KMAP RILSFD
Sbjct: 261 CKITGMSWITLPKGTYTPVETGLKTSRCQLEVNIDYKSLISHPPEGEWLKMAPLRILSFD 320
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPE HD +IQ+AN+V+ GE +PF+RNV T+ SC+PI G ++ + E ERD
Sbjct: 321 IECAGRKGIFPEAEHDSIIQIANVVSRSGESRPFVRNVFTVNSCSPITGSEIFAHEDERD 380
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+LL W+DF+ +VDPDV+IGYN FDLPYL+++
Sbjct: 381 MLLEWKDFVNKVDPDVIIGYNTTNFDLPYLLDR 413
>gi|226289255|gb|EEH44767.1| DNA polymerase delta catalytic subunit [Paracoccidioides brasiliensis
Pb18]
Length = 1110
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/622 (62%), Positives = 495/622 (79%), Gaps = 12/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG A++RRRLAVYCLKDAYLPQRL+DK M + NY EMARVTGVP +
Sbjct: 487 QKEDVHHTMITELFNGTADSRRRLAVYCLKDAYLPQRLMDKFMCLVNYTEMARVTGVPFN 546
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
FLLSRGQ +K +SQL RKA ++ LVIPN++ +A SEQ YEGATV+E +Y+ PIATL
Sbjct: 547 FLLSRGQQVKFISQLFRKALEQQLVIPNLRNEATSEQ--YEGATVIEPLRAYYDVPIATL 604
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEIL 577
DFASLYPSI+ A+NLCY+TL+ + E TP+G+ F + ++KG+L +IL
Sbjct: 605 DFASLYPSIIQAHNLCYTTLLKKSTIEAHGMKEGEDYIVTPNGDRFCTAKVRKGLLTQIL 664
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
EELL ARKRAK +L DP +KAVL+GRQLALK+SANSVYG TGATVG+LPC+ I+SS
Sbjct: 665 EELLGARKRAKKELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATVGKLPCLPIASST 724
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TSYGRQMIE TK+ VE K+T GY ++A+V+YGDTDSVMV+FG + AMKLG+EAAD
Sbjct: 725 TSYGRQMIEKTKEEVEAKYTIANGYSNDAQVVYGDTDSVMVKFGTKDLAEAMKLGQEAAD 784
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
Y+S FI+PIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNC +V+
Sbjct: 785 YVSDKFIRPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCRMVQ 844
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ L KIL++RD+ GA YVK+TISDLL N++D+S LVITK L+K DY K AHV
Sbjct: 845 TVIETVLKKILIERDVDGAQNYVKNTISDLLQNKIDMSKLVITKALSKK--DYTAKQAHV 902
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELAERM+KRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+NQ
Sbjct: 903 ELAERMKKRDAGSAPALGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDNQ 962
Query: 878 ISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--- 933
++KPL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKF K+ +C+GCK +
Sbjct: 963 LAKPLTRIFEPILGEKKASQLLTGEHTRSISVAAPTLGGLMKFTKKMQTCMGCKKPLVSK 1022
Query: 934 --SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
S+G +C +C+ R ELY KT+++ +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPI
Sbjct: 1023 DGSDGAVCENCRPRLGELYTKTLTKASDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPI 1082
Query: 992 FYRRKKAQKDMAEAKLQLDRWN 1013
FY R KA+KD+ +A+ +L R++
Sbjct: 1083 FYMRMKAKKDVEDAEKELSRFD 1104
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/345 (39%), Positives = 200/345 (57%), Gaps = 24/345 (6%)
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
++ A + +WARP L S+ + FQQ++ E L+ G A+ ++FG
Sbjct: 87 KESNAEKDQQWARPSLDDFDASR-DVLCFQQIEA---------EEGTLAGGRTAV-KLFG 135
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT GHSV V F Y Y++ P P D F LE ++ E ++ + + ++
Sbjct: 136 VTENGHSVLLHVTHFLHYLYVAAPVAFVPTDCEGFKAYLEAQL-EFHQPA-----IHSVQ 189
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGI-QLDGL---GMKSFMTYESN 240
MV + ++ +Q + P+LKI V P + R ++ G G+ + +T++ N
Sbjct: 190 MVMRENLFGFQGNQKSPYLKITVTDPRHINKLRTTIENGAANYKGMWRGDVDGILTFD-N 248
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFSK 298
+ + LRFMID I G +W+E P KY T +S CQ+E Y D+I+ +GE++K
Sbjct: 249 IEYILRFMIDTGISGMSWVEAPASKYELLPLTERVSNCQIEASIHYRDLIAHPNDGEWAK 308
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGV 358
MAP RILSFDIECAGRKG FPE DPVIQ+AN+VT GE +PF+RNV L +C+ IV
Sbjct: 309 MAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESKPFVRNVFVLDTCSLIVNT 368
Query: 359 DVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ F+TE +L+AW++F+ EVDPDV+IGYNI FD PYLI++ +
Sbjct: 369 QILEFDTEEKMLMAWKEFLVEVDPDVIIGYNIANFDFPYLIKRAE 413
>gi|225682079|gb|EEH20363.1| DNA polymerase delta catalytic subunit [Paracoccidioides brasiliensis
Pb03]
Length = 1110
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/622 (62%), Positives = 495/622 (79%), Gaps = 12/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG A++RRRLAVYCLKDAYLPQRL+DK M + NY EMARVTGVP +
Sbjct: 487 QKEDVHHTMITELFNGTADSRRRLAVYCLKDAYLPQRLMDKFMCLVNYTEMARVTGVPFN 546
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
FLLSRGQ +K +SQL RKA ++ LVIPN++ +A SEQ YEGATV+E +Y+ PIATL
Sbjct: 547 FLLSRGQQVKFISQLFRKALEQQLVIPNLRNEATSEQ--YEGATVIEPLRAYYDVPIATL 604
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEIL 577
DFASLYPSI+ A+NLCY+TL+ + E TP+G+ F + ++KG+L +IL
Sbjct: 605 DFASLYPSIIQAHNLCYTTLLKKSTIEAHGMKEGEDYIVTPNGDRFCTAKVRKGLLTQIL 664
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
EELL ARKRAK +L DP +KAVL+GRQLALK+SANSVYG TGATVG+LPC+ I+SS
Sbjct: 665 EELLGARKRAKKELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATVGKLPCLPIASST 724
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TSYGRQMIE TK+ VE K+T GY ++A+V+YGDTDSVMV+FG + AMKLG+EAAD
Sbjct: 725 TSYGRQMIEKTKEEVEAKYTIANGYSNDAQVVYGDTDSVMVKFGTKDLAEAMKLGQEAAD 784
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
Y+S FI+PIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNC +V+
Sbjct: 785 YVSDKFIRPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCRMVQ 844
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ L KIL++RD+ GA YVK+TISDLL N++D+S LVITK L+K DY K AHV
Sbjct: 845 TVIETVLKKILIERDVDGAQNYVKNTISDLLQNKIDMSKLVITKALSKK--DYTAKQAHV 902
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELAERM+KRDA +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+NQ
Sbjct: 903 ELAERMKKRDAGSAPALGDRVAYVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDNQ 962
Query: 878 ISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--- 933
++KPL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKF K+ +C+GCK +
Sbjct: 963 LAKPLTRIFEPILGEKKASQLLTGEHTRSISVAAPTLGGLMKFTKKMQTCMGCKKPLVSK 1022
Query: 934 --SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
S+G +C +C+ R ELY KT+++ +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPI
Sbjct: 1023 DGSDGAVCENCRPRLGELYTKTLTKASDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPI 1082
Query: 992 FYRRKKAQKDMAEAKLQLDRWN 1013
FY R KA+KD+ +A+ +L R++
Sbjct: 1083 FYMRMKAKKDVEDAEKELSRFD 1104
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/345 (39%), Positives = 201/345 (58%), Gaps = 24/345 (6%)
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
++ A + +WARP L S+ + FQQ+++ E L+ G A+ ++FG
Sbjct: 87 KESNAEKDQQWARPSLDDFDASR-DVLCFQQIEV---------EEGTLAGGRTAV-KLFG 135
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT GHSV V F Y Y++ P P D F LE ++ E ++ + + ++
Sbjct: 136 VTENGHSVLLHVTHFLHYLYVAAPVAFVPTDCEGFKAYLEAQL-EFHQPA-----IHSVQ 189
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGI-QLDGL---GMKSFMTYESN 240
MV + ++ +Q + P+LKI V P + R ++ G G+ + +T++ N
Sbjct: 190 MVMRENLFGFQGNQKSPYLKITVTDPRHINKLRTTIENGAANYKGMWRGDVDGILTFD-N 248
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFSK 298
+ + LRFMID I G +W+E P KY T +S CQ+E Y D+I+ +GE++K
Sbjct: 249 IEYILRFMIDTGISGMSWVEAPASKYELLPLTERVSNCQIEASIHYRDLIAHPNDGEWAK 308
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGV 358
MAP RILSFDIECAGRKG FPE DPVIQ+AN+VT GE +PF+RNV L +C+ IV
Sbjct: 309 MAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESKPFVRNVFVLDTCSLIVNT 368
Query: 359 DVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ F+TE +L+AW++F+ EVDPDV+IGYNI FD PYLI++ +
Sbjct: 369 QILEFDTEEKMLMAWKEFLVEVDPDVIIGYNIANFDFPYLIKRAE 413
>gi|302663472|ref|XP_003023378.1| Catalytic subunit of DNA polymerase delta [Trichophyton verrucosum
HKI 0517]
gi|291187372|gb|EFE42760.1| Catalytic subunit of DNA polymerase delta [Trichophyton verrucosum
HKI 0517]
Length = 1111
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/621 (63%), Positives = 490/621 (78%), Gaps = 9/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 487 QKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 546
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ IK +SQL RKA ++ LVIP++K + YEGATV+E +Y PIATLD
Sbjct: 547 FLLARGQQIKFISQLFRKALEQKLVIPDLKNDDNSNQQYEGATVIEPVRDYYPVPIATLD 606
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL++ KL L E TP+ + F + ++KG+L +ILE
Sbjct: 607 FASLYPSIIQAHNLCYTTLLSKRTVEKLGLKKGEDYIVTPNDDMFCTTKVRKGLLSQILE 666
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARKRAK +L KDP +KAVL+GRQLALKISANSVYG TGAT G+LPC+ I+SS T
Sbjct: 667 ELLTARKRAKRELAVEKDPFKKAVLNGRQLALKISANSVYGITGATNGKLPCLPIASSTT 726
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK VE ++T GY H+A+VIYGDTDSVMV+FG + AMKLG EAA +
Sbjct: 727 SYGRQMIEKTKDEVEARYTISNGYTHDAKVIYGDTDSVMVKFGTTDLAEAMKLGEEAAGF 786
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVYYPYLLI+KKRYAGLYWTNP K+DKMDTKGIETVRRDNCLLV+
Sbjct: 787 VSSKFMKPIKLEFEKVYYPYLLINKKRYAGLYWTNPVKYDKMDTKGIETVRRDNCLLVQT 846
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L+KIL+DR++ GA YVK+ ISDLL N++D+S LVITK LTK ++Y K AHVE
Sbjct: 847 VIETVLNKILIDRNVSGAETYVKNIISDLLQNKVDMSKLVITKALTK--EEYTGKQAHVE 904
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L ERMRKRDA +AP +GDRV YVI+ A GAK YE+SEDPIYVLENNIPIDT YYLENQ+
Sbjct: 905 LVERMRKRDAGSAPTLGDRVAYVIVGGATGAKNYEKSEDPIYVLENNIPIDTRYYLENQL 964
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + + +LL GDHTRSI+++ P+ G+MKFAK+ +C+GCK +
Sbjct: 965 AKPLTRIFEPILGEKKAAQLLKGDHTRSITVAAPTLGGLMKFAKKTQTCMGCKKPLVGKE 1024
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+G +CS+C+ R ELY +T+++V ELEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1025 EMSGAVCSNCRPRLGELYTRTLNKVSELEVRFGRLWTQCQRCQGSLHGEVICSSRDCPIF 1084
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +++ +L R++
Sbjct: 1085 YMRMKAKKDVEDSEKELARFD 1105
Score = 259 bits (662), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 204/356 (57%), Gaps = 24/356 (6%)
Query: 52 EDEESLILRDI-EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL 110
ED + +DI + +++ A + KW RP L G+ ++ FQQ+D E
Sbjct: 74 EDVLEKLTQDIGDLKENNAEKDQKWERPSLD-GFDPSRDNLCFQQIDA---------EEG 123
Query: 111 PLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA 170
L+ G+A +++FGVT G+SV V GF Y YI+ P D F LE
Sbjct: 124 YLAGGTA--VKLFGVTENGNSVLLHVTGFMHYLYIAAPVAFTQADCVPFKAYLE------ 175
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG-ILDRGIQLDGL 229
N+ S + ++M + ++ +Q + P+LKI V P + + R I+ G+
Sbjct: 176 NQLSVTEPVIHSVQMTMRENLYEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGM 235
Query: 230 --GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYS 285
G++ + N+ + LRFMID I G +W+EVP KY + S CQ+E Y
Sbjct: 236 WKGVEGEILTFDNIQYLLRFMIDTGISGMSWVEVPAAKYEVLPPGQCQSNCQIEASVHYR 295
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRN 345
D+I+ +GE++KMAP RILSFDIECAGRKG FPEP DPVIQ+AN+VT GE +PF+RN
Sbjct: 296 DMIAHPNDGEWAKMAPLRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKPFVRN 355
Query: 346 VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V + +C+ IV V+ F+ E ++L+AWRDF+ +VDPDV+IGYNI FD PYL+++
Sbjct: 356 VFVMDTCSSIVNTQVLEFDKEENMLMAWRDFVEKVDPDVIIGYNIANFDFPYLLDR 411
>gi|296816038|ref|XP_002848356.1| DNA polymerase delta catalytic subunit [Arthroderma otae CBS 113480]
gi|238841381|gb|EEQ31043.1| DNA polymerase delta catalytic subunit [Arthroderma otae CBS 113480]
Length = 1113
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/621 (63%), Positives = 489/621 (78%), Gaps = 9/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 489 QKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 548
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ IK +SQL RKA ++ LVIP++K + YEGATV+E +Y PIATLD
Sbjct: 549 FLLARGQQIKFISQLFRKALEQKLVIPDLKNDENSNQQYEGATVIEPVRDYYPVPIATLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KL L E TP+ + F + ++KG+L +ILE
Sbjct: 609 FASLYPSIIQAHNLCYTTLLNKRTVEKLGLKKGEDYIVTPNDDMFCTAKVRKGLLSQILE 668
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARKRAK +L KDP +KAVL+GRQLALKISANSVYG TGAT G+LPC+ I+SS T
Sbjct: 669 ELLSARKRAKRELAVEKDPFKKAVLNGRQLALKISANSVYGITGATNGKLPCLPIASSTT 728
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK VE ++T GY H+A+VIYGDTDSVMV+FG + AMKLG EAA Y
Sbjct: 729 SYGRQMIEKTKDEVEARYTISNGYTHDAKVIYGDTDSVMVKFGTKDLAEAMKLGEEAAGY 788
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVYYPYLLI+KKRYAGLYWTNP+K+DKMDTKGIETVRRDNCLLV+
Sbjct: 789 VSSKFMKPIKLEFEKVYYPYLLINKKRYAGLYWTNPDKYDKMDTKGIETVRRDNCLLVQT 848
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L+KIL+DR++ GA YVK+TISDLL N++D+S LVITK LTK D Y K AHVE
Sbjct: 849 VIETVLNKILIDRNVSGAETYVKNTISDLLQNKVDMSKLVITKALTK--DKYSGKQAHVE 906
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L ERMRKRDA +AP +GDRV YVI+ A G K YE+SEDPIYVLENNIPIDT YYLENQ+
Sbjct: 907 LVERMRKRDAGSAPTLGDRVAYVIVGGAAGDKNYEKSEDPIYVLENNIPIDTRYYLENQL 966
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+KPL RIFEPIL + + +LL GDHTRSI+++ P+ G+MKFAK+ +C+GCK +
Sbjct: 967 AKPLTRIFEPILGEKKAAQLLRGDHTRSITVAAPTLGGLMKFAKKTQTCMGCKKPLVGKE 1026
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +C++C+ R ELY +T+++V ELEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1027 EMLGAVCANCRPRLRELYTRTLNKVSELEVRFGRLWTQCQRCQGSLHGEVICSSRDCPIF 1086
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +++ +L R++
Sbjct: 1087 YMRMKAKKDVEDSEKELARFD 1107
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 205/358 (57%), Gaps = 24/358 (6%)
Query: 52 EDEESLILRDI-EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL 110
ED + +DI + +++ A + +W RPPL S+ ++ FQQ+D+
Sbjct: 76 EDVLEKLTQDIGDLKENNAEKDQEWERPPLGDFDPSR-DNLCFQQIDVQEGY-------- 126
Query: 111 PLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA 170
L G+A +++FGVT GHSV V GF Y Y++ P D + F LE ++
Sbjct: 127 -LGGGTA--VKLFGVTESGHSVLLHVTGFMHYLYVAAPVAFTQADCAPFRAYLEDQL--- 180
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG-ILDRGIQLDGL 229
+ + ++M + ++ +Q + P+LKI V P + + R I+ G+
Sbjct: 181 ---AITEPVIHSVQMTMRENLYEFQGNQQSPYLKITVTNPKSIVTVRSTIMSGSANYKGM 237
Query: 230 --GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYS 285
G++ + N+ + LRFMID I G +W+EVP KY + S CQ+E Y
Sbjct: 238 WKGIEGEILTFDNIQYLLRFMIDTGISGMSWVEVPASKYEILPPHQRHSNCQIEASVHYR 297
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRN 345
D+I+ +GE++KMAP RILSFDIECAGRKG FPEP DPVIQ+AN+VT GE +PF+RN
Sbjct: 298 DMIAHPNDGEWAKMAPLRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKPFVRN 357
Query: 346 VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
V + +C+ IV V+ F+ E +L+AWRDF+ +VDPDV+IGYNI FD PYL+++ +
Sbjct: 358 VFVMDTCSSIVNTQVLEFDKEEKMLIAWRDFVEKVDPDVIIGYNIANFDFPYLLDRAE 415
>gi|302421082|ref|XP_003008371.1| DNA polymerase delta catalytic subunit [Verticillium albo-atrum
VaMs.102]
gi|261351517|gb|EEY13945.1| DNA polymerase delta catalytic subunit [Verticillium albo-atrum
VaMs.102]
Length = 1055
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/622 (62%), Positives = 492/622 (79%), Gaps = 10/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTG P +
Sbjct: 431 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGAPFN 490
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ ++ +SQL RKA ++ LVIPN+K S++ YEGATV+E G+Y+ PIATLD
Sbjct: 491 MLLARGQQVRFISQLFRKALEQKLVIPNMKSEASDE-QYEGATVIEPTRGYYDVPIATLD 549
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+T+V + KL L E TP+G TFV + +KG+L +ILE
Sbjct: 550 FASLYPSIMQAHNLCYTTIVDKKAIEKLGLKKDEDYIVTPAGNTFVTAKQRKGLLAQILE 609
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARK+AK +L A DP +KAVL+GRQLALK+SANSVYG TGAT G+LPC+EI+SS T
Sbjct: 610 ELLAARKQAKRELAVATDPFKKAVLNGRQLALKVSANSVYGLTGATTGKLPCLEIASSTT 669
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMIE TK+ VE K+T GY H+A+VIYGDTDSVMV+FG + AMKLG EAA +
Sbjct: 670 SFGRQMIEKTKEEVEAKYTIANGYSHDAQVIYGDTDSVMVKFGTKDLAEAMKLGEEAAGF 729
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 730 VSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQT 789
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+D+D+ GA +YVK I+DLL N++D+S LVITK LTK DDY K AHVE
Sbjct: 790 VIEKVLRMILIDQDVQGAQEYVKDMIADLLQNKVDMSKLVITKALTK--DDYSAKQAHVE 847
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV+IK A GAK YE+SEDPI+VLENN+PIDT YYL+NQ+
Sbjct: 848 LAQRMKKRDAGSAPGLGDRVAYVMIKGAAGAKNYEKSEDPIFVLENNVPIDTRYYLDNQL 907
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+KPL RIFEPIL + + LL+G HTR+I+++ P G+MKFAK+ +C+GCK +++
Sbjct: 908 AKPLGRIFEPILGETKANSLLTGAHTRTIAVAAPMVGGLMKFAKKTQTCMGCKKPLTSKQ 967
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +CS C R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 968 EAEGAVCSDCAPRVGELYKKTLDRVSDLEVRFGRLWTQCQRCQGSIHCEVICSSKDCPIF 1027
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A +L R++F
Sbjct: 1028 YMRMKAKKDLEDAGKELKRFDF 1049
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 197/344 (57%), Gaps = 22/344 (6%)
Query: 63 EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRI 122
++R++ + + W RP L + +I+FQQ++ + G A +++
Sbjct: 29 KKRKNNSEKDQAWERPLLDD-FNPDKTTIVFQQIEAEE----------GTLHGGRATVKL 77
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRH 182
FGVT GHSV V F+ Y YI+ P P+D ++F LE ++ + +
Sbjct: 78 FGVTEAGHSVMLHVTDFKHYLYIAAPVSFQPEDCNNFRAYLETQVAQHQ------PVIHS 131
Query: 183 IEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGL--GMKSFMTYES 239
+ ++ + +I +Q P+LKI V P + R ++ G GL G+ +
Sbjct: 132 VALLMRENIYGFQGNVKNPYLKITVNDPKHIGKVRSTIEAGNANWKGLWKGVDGGVMTFD 191
Query: 240 NVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL--SYCQLEFDCLYSDIISRHPEGEFS 297
N+ + LRFM+DC + G +W+E P Y+ + +L S CQ+E + Y D+++ PEGE+S
Sbjct: 192 NIQYVLRFMVDCKLQGMSWVEAPAKSYKLMSSSLRQSNCQIEAEISYLDLVAHKPEGEWS 251
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
KMAP RILSFDIECAGRKG FPE HDPVIQ+AN+VT GEK+PFIRNV L + + IV
Sbjct: 252 KMAPLRILSFDIECAGRKGIFPEANHDPVIQIANVVTRYGEKKPFIRNVFCLDTTSSIVA 311
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V+ F+ E +L W+ F++ VDPD++IGYNI FD PYL+++
Sbjct: 312 TQVLEFDKEEKMLKEWQKFLQSVDPDLIIGYNIANFDFPYLLDR 355
>gi|326480238|gb|EGE04248.1| DNA polymerase delta catalytic subunit [Trichophyton equinum CBS
127.97]
Length = 1111
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/621 (63%), Positives = 489/621 (78%), Gaps = 9/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 487 QKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 546
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ IK +SQL RKA ++ LVIP++K + YEGATV+E +Y PIATLD
Sbjct: 547 FLLARGQQIKFISQLFRKALEQKLVIPDLKNDDNSNQQYEGATVIEPVRDYYPVPIATLD 606
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KL L E TP+ + F + ++KG+L +ILE
Sbjct: 607 FASLYPSIIQAHNLCYTTLLNKRTVEKLGLKKDEDYIVTPNDDMFCTAKVRKGLLSQILE 666
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARKRAK +L KDP +KAVL+GRQLALKISANSVYG TGAT G+LPC+ I+SS T
Sbjct: 667 ELLTARKRAKRELAVEKDPFKKAVLNGRQLALKISANSVYGITGATNGKLPCLAIASSTT 726
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK VE ++T GY H+A+VIYGDTDSVMV+FG + AMKLG EAA +
Sbjct: 727 SYGRQMIEKTKDEVEARYTISNGYSHDAKVIYGDTDSVMVKFGTTDLAEAMKLGEEAAGF 786
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVYYPYLLI+KKRYAGLYWTNP K+DKMDTKGIETVRRDNCLLV+
Sbjct: 787 VSSKFMKPIKLEFEKVYYPYLLINKKRYAGLYWTNPVKYDKMDTKGIETVRRDNCLLVQT 846
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L+KIL+DR++ GA YVK+ ISDLL N++D+S LVITK LTK ++Y K AHVE
Sbjct: 847 VIETVLNKILIDRNVNGAETYVKNIISDLLQNKVDMSKLVITKALTK--EEYTGKQAHVE 904
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L ERMRKRDA +AP +GDRV YVI+ A GAK YE+SEDPIYVLENNIPIDT YYLENQ+
Sbjct: 905 LVERMRKRDAGSAPTLGDRVAYVIVGGATGAKNYEKSEDPIYVLENNIPIDTRYYLENQL 964
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + + +LL GDHTRSI+++ P+ G+MKFAK+ +C+GCK +
Sbjct: 965 AKPLTRIFEPILGEKKAAQLLKGDHTRSITVAAPTLGGLMKFAKKTQTCMGCKKPLVGKE 1024
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+G +CS+C+ R ELY +T+++V ELEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1025 EMSGAVCSNCRPRLGELYTRTLNKVSELEVRFGRLWTQCQRCQGSLHGEVICSSRDCPIF 1084
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +++ +L R++
Sbjct: 1085 YMRMKAKKDVEDSEKELARFD 1105
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 206/356 (57%), Gaps = 24/356 (6%)
Query: 52 EDEESLILRDI-EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL 110
ED + +DI + +++ A + KW RPPL G+ S+ FQQ+D+ E
Sbjct: 74 EDVLEKLTQDIGDLKENNAEKDQKWERPPLD-GFNPSRDSLCFQQIDV---------EEG 123
Query: 111 PLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA 170
L+ G+A +++FGVT G+SV V GF Y YI+ P D F LE
Sbjct: 124 YLAGGTA--VKLFGVTENGNSVLLHVTGFMHYLYIAAPVAFTQADCVPFKAYLE------ 175
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG-ILDRGIQLDGL 229
N+ S + ++M + ++ +Q + P+LKI V P + + R I+ G+
Sbjct: 176 NQLSVTEPVIHSVQMTMRENLYEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGM 235
Query: 230 --GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYS 285
G++ + N+ + LRFMID I G +W+EVP KY + S CQ+E Y
Sbjct: 236 WKGIEGEILTFDNIQYLLRFMIDTGISGMSWVEVPAAKYEVLPPGQCQSNCQIEASVHYR 295
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRN 345
D+I+ +GE++KMAP RILSFDIECAGRKG FPEP DPVIQ+AN+VT GE +PF+RN
Sbjct: 296 DMIAHPNDGEWAKMAPLRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKPFVRN 355
Query: 346 VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V + +C+ IV V+ F+ E ++L+AWRDF+ +VDPDV+IGYNI FD PYL+++
Sbjct: 356 VFVMDTCSSIVNTQVLEFDKEENMLMAWRDFVEKVDPDVIIGYNIANFDFPYLLDR 411
>gi|324120696|dbj|BAJ78739.1| DNA polymerase delta catalytic subunit [Epiophlebia superstes]
Length = 1007
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/623 (63%), Positives = 481/623 (77%), Gaps = 13/623 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSIISDLQNGN +TRRRLAVYCLKDAYLP RLLDKLM I NY+EMARVTGVP+S
Sbjct: 383 QKEDVQHSIISDLQNGNPQTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVPLS 442
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK K+K+ VIP A ++ +EGATV+E G+Y PI TLD
Sbjct: 443 CLLTRGQQIKVVSQLLRKGKEKDFVIPTYSGAVQDE-QFEGATVIEPLRGYYADPITTLD 501
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P KL L + KTPSG FV+ +++KG+LPEILE
Sbjct: 502 FSSLYPSIMMAHNLCYTTLLQPGTKEKLGLSTDQYAKTPSGNFFVRESVRKGLLPEILEN 561
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AK +LKE DPL + VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 562 LLSARKKAKNELKEETDPLRRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 621
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE K+ GY H+A VIYGDTDSVMV+FGV T+E AM+LG+EAA+Y+
Sbjct: 622 YGRAMIEQTKQEVEAKYCISKGYTHDAIVIYGDTDSVMVKFGVKTLEEAMELGKEAAEYV 681
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F+KPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDNC LV N+
Sbjct: 682 SSKFVKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGIETVRRDNCPLVANM 741
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DRD GAV Y K I+DLL NR+D+S LV+TK L K DY K AHVEL
Sbjct: 742 MNTCLQKLLIDRDPDGAVAYAKQVIADLLCNRIDISQLVVTKELAK--QDYASKQAHVEL 799
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +MRKRD TAP +GDRVPYV+ AAKG AY ++EDPIYVLEN+IPID +YYLENQ+S
Sbjct: 800 ANKMRKRDPGTAPKLGDRVPYVLTAAAKGTPAYMKAEDPIYVLENSIPIDCNYYLENQLS 859
Query: 880 KPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
KPLLRIF PIL + E LL GDHTR+ ++ T + F +++ +C+GCKA++
Sbjct: 860 KPLLRIFSPILGDNKAESVLLRGDHTRTKAVVTSRIGALSAFTRKREACLGCKAVLPIAK 919
Query: 934 ----SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
G +C HC R+AE+Y + ++QELE F RLWTQCQ CQGSLH++VLCTSRDC
Sbjct: 920 EEGSPQGPVCQHCSNRQAEIYTNELVRMQELEKRFARLWTQCQRCQGSLHEEVLCTSRDC 979
Query: 990 PIFYRRKKAQKDMAEAKLQLDRW 1012
PIFY RKK Q D+A + R+
Sbjct: 980 PIFYMRKKVQMDLATQDTVIQRF 1002
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/296 (47%), Positives = 198/296 (66%), Gaps = 11/296 (3%)
Query: 115 GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF----HQILEGRMREA 170
G I+R++GVT EGHSVCC VHGF PYF++ P+ D + F ++ L MR
Sbjct: 14 GPVPIMRMYGVTMEGHSVCCHVHGFSPYFFVHIPEAFNNDHCAPFKVALNKALIADMR-G 72
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
NR++ + + V +E+ K +I Y+ PFL++ +ALP ++ + + +L++ + LG
Sbjct: 73 NRDN-LSEAVLAVEIQMKENIFGYRGGNKVPFLRVTLALPKLIPAAKRLLEKEMIYTALG 131
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK-----TLSYCQLEFDCLYS 285
+ +ESN+ F +RFM+D N+VG +W+E+P K+ K S CQLE D +
Sbjct: 132 PHPYQAFESNIDFDIRFMVDTNLVGCSWVELPPQKWSIRTKGGGKPIQSRCQLEVDVSWE 191
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRN 345
++IS P+GE++K+APFRILS+DIECAGRKG FPEP HDPVIQ+AN+V QG +PFIRN
Sbjct: 192 EMISHPPDGEWAKVAPFRILSYDIECAGRKGIFPEPDHDPVIQIANMVIRQGSTEPFIRN 251
Query: 346 VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V TL +CAPIVG V+SF+ ER++L W DF+REVDPD+ GYNI FDLPYLI +
Sbjct: 252 VFTLDTCAPIVGCQVLSFKDERELLEKWADFVREVDPDLFTGYNINNFDLPYLINR 307
>gi|324120718|dbj|BAJ78750.1| DNA polymerase delta catalytic subunit [Oyamia lugubris]
Length = 1111
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/616 (63%), Positives = 479/616 (77%), Gaps = 5/616 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH+IISDLQNGN +TRRRLA+YCLKDAYLP RLLDKLM + NY+EMARVTGV +
Sbjct: 493 QKEDVHHNIISDLQNGNPQTRRRLAIYCLKDAYLPLRLLDKLMCVINYMEMARVTGVSLG 552
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKAK+K ++P + +G +EGATV+E R G+Y PIATLD
Sbjct: 553 SLLTRGQQIKVVSQLLRKAKEKGYLMPTYQHSGGGDEQFEGATVIEPRKGYYSDPIATLD 612
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ KL L P+ KTP+G FV + ++KG+LPE+LE
Sbjct: 613 FSSLYPSIMMAHNLCYTTLLQGGIKEKLELTPDQYVKTPAGNFFVTAAVRKGLLPEVLES 672
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK AK +LK+ DP + VLDGRQLALKISANSVYGFTGA VG+LPC+EISSSVT+
Sbjct: 673 LLAARKHAKEELKQETDPFRQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISSSVTA 732
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE K++ GYEH+A VIYGDTDSVMV+FGV T+E AM+LGREAA ++
Sbjct: 733 YGRTMIEQTKQEVEQKYSVTNGYEHDAMVIYGDTDSVMVKFGVKTLEEAMELGREAAKFV 792
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F+ PIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDNC LV N+
Sbjct: 793 SEKFVNPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGIETVRRDNCPLVVNV 852
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DRD GA+ Y K ISDLL NR+D+S LV+TK L K +Y K AHVEL
Sbjct: 853 MNMCLQKLLIDRDPDGALLYAKQVISDLLCNRVDISQLVVTKELAK--QNYAAKQAHVEL 910
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +MRKRD TAP +GDRVPYVII AAK AY ++EDPIYVLEN+IPID+ YYLENQ+S
Sbjct: 911 AAKMRKRDPGTAPKIGDRVPYVIISAAKNTPAYAKAEDPIYVLENSIPIDSTYYLENQLS 970
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT- 937
+PLLRIFEPIL + AS LL GDHT + S+ T + F ++ +C+GCKA++ + T
Sbjct: 971 QPLLRIFEPILGEKASSLLLKGDHTLTKSVQTSRVGALSAFTRKVATCLGCKAVLKDSTK 1030
Query: 938 -LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC +C EA +Y K V + +LE+ FGRLWTQCQ CQGSLH++VLCTSRDCPIFY RK
Sbjct: 1031 PLCQYCTKNEAAIYQKEVEKQSDLELRFGRLWTQCQSCQGSLHEEVLCTSRDCPIFYMRK 1090
Query: 997 KAQKDMAEAKLQLDRW 1012
K Q D+ L R+
Sbjct: 1091 KVQMDLDTQDKTLQRF 1106
Score = 315 bits (807), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 210/332 (63%), Gaps = 7/332 (2%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW+RP + SI FQQ+DID G + S G I R++GVT EG+SVC
Sbjct: 89 KWSRPA-PPRFDPAKDSITFQQIDIDNYSGPPVAGMPGSSIGPVPIFRMYGVTSEGNSVC 147
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILE----GRMREANRNSKVPQFVRHIEMVQKR 189
C VHGF PYF++S P D F + L MR N +V V +E+V +
Sbjct: 148 CHVHGFSPYFFVSAPDNFTDADCKPFQEALNTIVLNDMRSNPNNVQVA--VLAVEIVNRI 205
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
++ Y+ F+K+ VALP ++A+ + +L+R G+ ++ +ESN+ F +RFM
Sbjct: 206 NLFGYRGDTKSKFIKVTVALPRLIAAAKRLLERETVYPKGGVHAYQAFESNIDFDIRFMT 265
Query: 250 DCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
D +VG +W+E+P GK+ ++ + CQ+E DC + ++ PEGE+SK+APFRILSFDI
Sbjct: 266 DTGLVGCSWVELPPGKWMYHSQKQTRCQIEVDCSWEKLVPHAPEGEWSKVAPFRILSFDI 325
Query: 310 ECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
ECAGRKG FPE HDPVIQ+AN+V QG +P IRNV TL +CAPIVG V+S++ ER++
Sbjct: 326 ECAGRKGIFPEADHDPVIQIANMVVCQGTAEPMIRNVFTLNTCAPIVGCQVLSYDNEREM 385
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
LL W +F+REVDPD++ GYNI FDLPYLI +
Sbjct: 386 LLKWSEFVREVDPDIITGYNINNFDLPYLINR 417
>gi|367037701|ref|XP_003649231.1| hypothetical protein THITE_2107682 [Thielavia terrestris NRRL 8126]
gi|346996492|gb|AEO62895.1| hypothetical protein THITE_2107682 [Thielavia terrestris NRRL 8126]
Length = 1103
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/622 (62%), Positives = 494/622 (79%), Gaps = 10/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L G E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 479 QKEDVHHSMITELFEGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 538
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ +K LSQL RKA ++ LVIPN++ SE+ YEGATV+E G+Y+ PIATLD
Sbjct: 539 FLLARGQQVKFLSQLFRKALEQKLVIPNLRSESSEE-QYEGATVIEPTRGYYDVPIATLD 597
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ +D K L E TP+G+ FV + +KG+L +ILE
Sbjct: 598 FASLYPSIIQAHNLCYTTLIKKKDIEKWGLKKDEDYIVTPNGDMFVTTKQRKGLLSQILE 657
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARK+AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS T
Sbjct: 658 ELLAARKQAKKELAAETDPFKKAVLNGRQLALKISANSVYGLTGATNGKLPCLEIASSTT 717
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMIE TK+ VE ++ GY H+A+VIYGDTDSVMV+FG + AMKLG +A+ +
Sbjct: 718 SFGRQMIEKTKQEVEKRYCIANGYSHDAQVIYGDTDSVMVKFGTKDLAEAMKLGEDASQF 777
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT P+K+DKMDTKGIETVRRDNCLLV+
Sbjct: 778 VSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTKPDKYDKMDTKGIETVRRDNCLLVQT 837
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+D+D+PGA +YVK TI+DLL N++D+S LVITK LTK +DY K AHVE
Sbjct: 838 VIEKVLRMILIDQDVPGAQEYVKDTIADLLQNKIDMSKLVITKALTK--EDYAAKQAHVE 895
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV++K A G+K +ERSEDPIYVLENN+PIDT YYL+NQ+
Sbjct: 896 LAQRMKKRDAGSAPALGDRVAYVMVKGAAGSKNFERSEDPIYVLENNVPIDTKYYLDNQL 955
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + +K LL+GDHTR+IS++ P+ G+MKFAK+ +C+GCK +
Sbjct: 956 AKPLGRIFEPILGETKAKSLLTGDHTRAISVAAPTVGGLMKFAKKTQTCMGCKKPLTGKE 1015
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
S G +C+ R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1016 ESQGAVCADDAPRIGELYKKTLDKVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1075
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A +L R++F
Sbjct: 1076 YMRMKAKKDLEDANRELRRFDF 1097
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/333 (40%), Positives = 195/333 (58%), Gaps = 25/333 (7%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W RPP+ + ++ FQ ++ + +G A +++FGVT G+SV
Sbjct: 91 WDRPPVPRDFEPDKDALCFQAIEAEE----------GTLAGGQATVKLFGVTENGNSVLL 140
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY- 193
V F+ Y Y++ P P+D F LE ++ + Q V H ++ R +Y
Sbjct: 141 HVKDFKHYLYVAAPVSFTPEDCPKFRAYLETQL-------AMHQPVIHSVVLTMRENIYG 193
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM-----KSFMTYESNVLFALRFM 248
+Q P+LKI V P + R ++RG + GM + MTY+ N+ + LRFM
Sbjct: 194 FQGNIQNPYLKITVNDPKFINRVRTTIERG-DANWKGMWKSADGTIMTYD-NIQYLLRFM 251
Query: 249 IDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
+DC+I G W+E P G+YR S CQ+E + Y D+I+ P GE+SKMAP RILSFD
Sbjct: 252 VDCSIAGMAWVEAPAGRYRLVTDKQSNCQIEAEMSYRDLIAHKPVGEWSKMAPLRILSFD 311
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPE HD VIQ+AN+VT G+K+PF+RNV L + +PIV ++SF+ E D
Sbjct: 312 IECAGRKGIFPEAKHDAVIQIANIVTKYGDKKPFVRNVFCLDTTSPIVATQILSFDREED 371
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+LLAWRDF+ +VDPD++ GYNI FD PYL+++
Sbjct: 372 MLLAWRDFLEKVDPDIITGYNIANFDFPYLLDR 404
>gi|346974556|gb|EGY18008.1| DNA polymerase delta catalytic subunit [Verticillium dahliae VdLs.17]
Length = 1104
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/622 (62%), Positives = 491/622 (78%), Gaps = 10/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTG P +
Sbjct: 480 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGAPFN 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ ++ +SQL RKA ++ LVIPN+K S++ YEGATV+E G+Y+ PIATLD
Sbjct: 540 MLLARGQQVRFISQLFRKALEQKLVIPNMKSEASDE-QYEGATVIEPTRGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+T+V + KL L E TP+G TFV + +KG+L +ILE
Sbjct: 599 FASLYPSIMQAHNLCYTTIVDKKAIEKLGLKKDEDYIVTPAGNTFVTAKQRKGLLAQILE 658
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARK+AK +L DP +KAVL+GRQLALK+SANSVYG TGAT G+LPC+EI+SS T
Sbjct: 659 ELLAARKQAKRELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATTGKLPCLEIASSTT 718
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMIE TK+ VE K+T GY H+A+VIYGDTDSVMV+FG + AMKLG EAA +
Sbjct: 719 SFGRQMIEKTKEEVEAKYTIANGYSHDAQVIYGDTDSVMVKFGTKDLAEAMKLGEEAAGF 778
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 779 VSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQT 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+D+D+ GA +YVK I+DLL N++D+S LVITK LTK DDY K AHVE
Sbjct: 839 VIEKVLRMILIDQDVQGAQEYVKDMIADLLQNKVDMSKLVITKALTK--DDYSAKQAHVE 896
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV+IK A GAK YE+SEDPI+VLENN+PIDT YYL+NQ+
Sbjct: 897 LAQRMKKRDAGSAPGLGDRVAYVMIKGAAGAKNYEKSEDPIFVLENNVPIDTRYYLDNQL 956
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+KPL RIFEPIL + + LL+G HTR+I+++ P G+MKFAK+ +C+GCK +++
Sbjct: 957 AKPLGRIFEPILGETKANSLLTGAHTRTIAVAAPMVGGLMKFAKKTQTCMGCKKPLTSKQ 1016
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +CS C R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1017 EAEGAVCSDCAPRVGELYKKTLDRVSDLEVRFGRLWTQCQRCQGSIHCEVICSSKDCPIF 1076
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A +L R++F
Sbjct: 1077 YMRMKAKKDLEDAGKELKRFDF 1098
Score = 262 bits (669), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 203/357 (56%), Gaps = 27/357 (7%)
Query: 55 ESLILRDIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
ES +L + Q +Q+ + + W RPPL + + +I+FQQ++ +
Sbjct: 65 ESEVLEKLSQDISELKQNNSEKDQAWERPPLDD-FNPEKTTIVFQQIEAEE--------- 114
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
G A +++FGVT GHSV V F+ Y YI+ P P+D ++F LE ++ +
Sbjct: 115 -GTLHGGRATVKLFGVTEAGHSVMLHVTDFKHYLYIAAPVSFQPEDCNNFRAYLETQVAQ 173
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDG 228
+ + ++ + +I +Q P+LKI V P + R ++ G G
Sbjct: 174 HQ------PVIHSVALLMRENIYGFQGNVKNPYLKITVNDPKHIGKVRSTIEAGNANWKG 227
Query: 229 L--GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL--SYCQLEFDCLY 284
L G+ + N+ + LRFM+DC + G +W+E P Y+ + +L S CQ+E + Y
Sbjct: 228 LWKGVDGGVMTFDNIQYVLRFMVDCKLQGMSWVEAPAKSYKVMSSSLRQSNCQIEAEISY 287
Query: 285 SDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIR 344
D+++ PEGE+SKMAP RILSFDIECAGRKG FPE HDPVIQ+AN+VT GEK+PFIR
Sbjct: 288 LDLVAHKPEGEWSKMAPLRILSFDIECAGRKGIFPEANHDPVIQIANVVTRYGEKKPFIR 347
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
NV L + + IV V+ F+ E +L W+ F++ VDPD++IGYNI FD PYL+++
Sbjct: 348 NVFCLDTTSSIVATQVLEFDKEEKMLKEWQKFLQSVDPDLIIGYNIANFDFPYLLDR 404
>gi|358389733|gb|EHK27325.1| hypothetical protein TRIVIDRAFT_33534 [Trichoderma virens Gv29-8]
Length = 1105
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/621 (61%), Positives = 492/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 481 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ IK +SQL RKA ++ LVIPN+ G+E YEGATV+E G+Y+ PIATLD
Sbjct: 541 FLLSRGQQIKFVSQLFRKALEQKLVIPNIAPQGTED-QYEGATVIEPTRGYYDVPIATLD 599
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ P D + L + TP+G++FV + +KG+L +ILE
Sbjct: 600 FASLYPSIIQAHNLCYTTLLRPGDVERFKLEKDVDYIVTPNGDSFVTATKRKGLLAQILE 659
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARK+AK +L + DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+ I+SS T
Sbjct: 660 ELLSARKQAKRELAQETDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLAIASSTT 719
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMIE TK+ VE K+ GY H+A+VIYGDTDSVMV+FG + AMKLG EA+ +
Sbjct: 720 SFGRQMIEKTKREVEMKYNIANGYTHDAQVIYGDTDSVMVKFGTKDLAEAMKLGEEASKF 779
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT EK+DKMDTKG+ETVRRDNCLL +
Sbjct: 780 VSAKFLKPIKLEFEKVYFPYLLINKKRYAGLYWTKTEKYDKMDTKGLETVRRDNCLLAQT 839
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+DRD+ GA YVKSTI+DLL N++D+S LVITK LTK +DY K AHVE
Sbjct: 840 VIEKVLRMILIDRDVQGAQDYVKSTIADLLQNKIDMSKLVITKALTK--EDYAAKQAHVE 897
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV+++ A GAK +E+SEDPIYVLENN+PIDT YYL+NQ+
Sbjct: 898 LAQRMKKRDAGSAPGLGDRVAYVMVRGAAGAKNFEKSEDPIYVLENNVPIDTKYYLDNQL 957
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + ++ LL+GDHTR+IS++ P+ G+MKFAK+ +C+GCK +
Sbjct: 958 AKPLGRIFEPILGETKARSLLTGDHTRTISVAAPTVGGLMKFAKKTQTCMGCKKPLTGKH 1017
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
S G +CS C R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1018 ESAGAVCSDCAPRVGELYNKTLDRVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1077
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A +L R++
Sbjct: 1078 YMRMKAKKDLEDAGKELSRFD 1098
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 221/417 (52%), Gaps = 60/417 (14%)
Query: 7 SARKR-------PPPTPK----ESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEE 55
SA+KR PP P+ + P + + T V + E L++
Sbjct: 27 SAKKRKTEIDEPAPPIPRFISSQKGPGVKLGASQTKSVFESEVLEK-------------- 72
Query: 56 SLILRDI-EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSS 114
+ +DI E++Q+ + W RPP++ +V SI FQ ++ E L
Sbjct: 73 --LSQDISERKQNNTEKDQAWDRPPVTE-FVPGQDSICFQSIEA---------EEGTLHG 120
Query: 115 GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS 174
G A+ ++FGVT EG+SV V F+ Y Y++ P D + + LE ++ +
Sbjct: 121 GKVAV-KLFGVTEEGYSVMLHVTDFKHYLYVAAPLSFQQKDCALYKAYLETQVAQHQ--- 176
Query: 175 KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQ--------L 226
+ + + + I +YQ P+LKI V P + + R +++G+ L
Sbjct: 177 ---PAIHSVSLTMREDIYHYQGNVQSPYLKITVTDPKFINTVRSTIEKGLANWKGMWGAL 233
Query: 227 DGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK--TLSYCQLEFDCLY 284
DG G++++ N+ + LRFM+DC I G +W+E P Y+ + S CQ+E + Y
Sbjct: 234 DG-GLRTY----DNIQYVLRFMVDCKIQGMSWVEAPASSYKMIPEHSRQSNCQIEAEVNY 288
Query: 285 SDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIR 344
D+I+ PEGE++KMAP RILSFDIECAGRKG FPE DPVIQ+AN+VT GEK+PFIR
Sbjct: 289 MDLIAHKPEGEWAKMAPLRILSFDIECAGRKGIFPEANVDPVIQIANVVTKYGEKKPFIR 348
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
NV L + + IV ++ +E E +L W+ F+ VDPD++IGYNI FD PYL+++
Sbjct: 349 NVFCLDTTSSIVATQILDYEKEEQMLHEWQQFLVRVDPDIIIGYNISNFDFPYLLDR 405
>gi|303314745|ref|XP_003067381.1| DNA polymerase delta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240107049|gb|EER25236.1| DNA polymerase delta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1110
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/621 (62%), Positives = 494/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 487 QKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 546
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA +++LVIPN+K E+ Y+GATV+E +Y+ PIATLD
Sbjct: 547 FLLSRGQQVKFISQLFRKALEQDLVIPNLKNENGEE-QYKGATVIEPVKDYYDVPIATLD 605
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KL L E TP+G+ F S ++KG+L +IL+
Sbjct: 606 FASLYPSIIQAHNLCYTTLLNKTSVEKLKLKKDEDYIVTPNGDMFCTSKVRKGLLSQILQ 665
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGA+ G+LPC+ I+SS T
Sbjct: 666 ELLSARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGITGASNGKLPCLAIASSTT 725
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMI TK VE +FT GY ++A+VIYGDTDSVMV+FGV + AMKLG+EAAD+
Sbjct: 726 SYGRQMIMKTKDEVEARFTMANGYPYDAKVIYGDTDSVMVKFGVKDIAEAMKLGQEAADF 785
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F++PIKLEFEKVY+PYLLI+KKRYAGL+WTNP KFDKMD+KGIETVRRDNC LV+
Sbjct: 786 VSAKFLEPIKLEFEKVYFPYLLINKKRYAGLFWTNPNKFDKMDSKGIETVRRDNCRLVQT 845
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L KIL+DRD+ GA YVK TI+DLL N++D+S LVITK L+K+ DY K AHVE
Sbjct: 846 VIETVLKKILIDRDVNGAENYVKDTIADLLQNKVDMSKLVITKALSKS--DYSAKQAHVE 903
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+NQ+
Sbjct: 904 LAERMRKRDVGSAPTLGDRVAYVIVKGATGSKNYEKSEDPIYVLENNIPIDTKYYLDNQL 963
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+KPL RIF+PIL + S +LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK + +
Sbjct: 964 AKPLARIFDPILGERRSAQLLTGEHTRSISVAAPTLGGLMKFAKKTQTCMGCKKPLVDKD 1023
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +C +C+ R ELY KT+++V +LE+ FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1024 EKEGAVCENCRPRLGELYSKTLNKVSDLEIRFGRLWTQCQRCQGSLHCEVICSSRDCPIF 1083
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A+ +L R++
Sbjct: 1084 YMRMKAKKDVEDAERELARFD 1104
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/344 (39%), Positives = 197/344 (57%), Gaps = 25/344 (7%)
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
++ A + +W RP L + S+ FQQ++ E P S G +R+FG
Sbjct: 86 KESNAEKDQQWERPSLDD-FDPTRDSLCFQQIEA---------EEGPFS-GDQTAVRLFG 134
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT GHSV V F+ Y Y++ P D F LE + N + + +++
Sbjct: 135 VTEAGHSVLLHVTDFKHYLYVAAPVSFTKSDCEPFGAYLENHV--GNHQT----VIHNVQ 188
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGL----GMKSFMTYES 239
MV K ++ +Q + P+L+I V P + R ++ G GL G +T++
Sbjct: 189 MVMKENLFGFQGNQQHPYLRITVTDPKYINRVRSTIESGNANYRGLWKVGGTDGILTFD- 247
Query: 240 NVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSY--CQLEFDCLYSDIISRHPEGEFS 297
N+ + LRFMID I G +W+EVP KYR + Y CQ+E Y D+I+ +GE++
Sbjct: 248 NIQYILRFMIDTGISGMSWVEVPPSKYRIVPEHQRYSNCQIEAVVHYRDLIAHPHDGEWA 307
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
KMAP RILSFDIECAGRKG FPE DPVIQ+AN+VT GE +PF+RNV L C+ IV
Sbjct: 308 KMAPLRILSFDIECAGRKGIFPEAHEDPVIQIANVVTRYGESKPFVRNVFVLNGCSLIVN 367
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++ F+TE+++L+AWRDF+ +VDPDV+IGYNI FD PYL+++
Sbjct: 368 TQILDFKTEQEMLMAWRDFLEKVDPDVIIGYNIANFDFPYLLDR 411
>gi|315042333|ref|XP_003170543.1| DNA polymerase delta catalytic subunit [Arthroderma gypseum CBS
118893]
gi|311345577|gb|EFR04780.1| DNA polymerase delta catalytic subunit [Arthroderma gypseum CBS
118893]
Length = 1112
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/621 (62%), Positives = 490/621 (78%), Gaps = 9/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 488 QKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 547
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ IK +SQL RKA ++ LVIP++K + YEGATV+E +Y PIATLD
Sbjct: 548 FLLARGQQIKFISQLFRKALEQKLVIPDLKNDENSNQQYEGATVIEPVRDYYAVPIATLD 607
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KL L E TP+ + F + ++KG+L +ILE
Sbjct: 608 FASLYPSIIQAHNLCYTTLLNKRTVEKLGLKKGEDYIVTPNDDMFCTTKIRKGLLSQILE 667
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARKRAK +L KDP +KAVL+GRQLALKISANSVYG TGAT G+LPC+ I+SS T
Sbjct: 668 ELLTARKRAKRELAIEKDPFKKAVLNGRQLALKISANSVYGITGATNGKLPCLPIASSTT 727
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++T GY H+A+VIYGDTDSVMV+FG + AMKLG EAA +
Sbjct: 728 SYGRQMIEKTKEEVEARYTISNGYAHDAKVIYGDTDSVMVKFGTADLAEAMKLGEEAAGF 787
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVYYPYLLI+KKRYAGL+WTNP K+DKMDTKGIETVRRDNCLLV+
Sbjct: 788 VSSKFMKPIKLEFEKVYYPYLLINKKRYAGLFWTNPTKYDKMDTKGIETVRRDNCLLVQT 847
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L+KIL+DR++ GA YVK+ ISDLL N++D+S LVITK LTK + Y+ K AHVE
Sbjct: 848 VIETVLNKILIDRNVNGAETYVKNIISDLLQNKVDMSKLVITKALTK--EKYQGKQAHVE 905
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L ERMRKRDA +AP +GDRV YVI+ GAK YE++EDPIYVLENNIPIDT YYLENQ+
Sbjct: 906 LVERMRKRDAGSAPTLGDRVAYVIVSGVTGAKNYEKAEDPIYVLENNIPIDTRYYLENQL 965
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + + +LL+GDHTRSI+++ PS G+MKFAK+ +C+GCK +
Sbjct: 966 AKPLTRIFEPILGEKKAAQLLTGDHTRSITVAAPSLGGLMKFAKKTQTCMGCKKPLVGKE 1025
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+G +C++C+ R ELY +T+++V ELEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1026 EMSGAVCANCRPRLGELYTRTLNKVSELEVRFGRLWTQCQRCQGSLHGEVICSSRDCPIF 1085
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +++ +L R++
Sbjct: 1086 YMRMKAKKDVEDSERELARFD 1106
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 144/360 (40%), Positives = 207/360 (57%), Gaps = 28/360 (7%)
Query: 52 EDEESLILRDI-EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDID--YVIGDSNRE 108
ED + +DI + +++ A + KW RPPL + S+ ++ FQQ+D++ Y+ G
Sbjct: 75 EDVLEKLTQDIGDLKENNAEKDQKWERPPLDNFDPSR-DNLCFQQIDVEEGYMAG----- 128
Query: 109 LLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR 168
G+A +++FGVT GHSV V GF Y YI+ P D F LE
Sbjct: 129 ------GTA--VKLFGVTENGHSVLLHVTGFMHYLYIAAPVAFTQADCVPFKAYLE---- 176
Query: 169 EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG-ILDRGIQLD 227
N+ S + ++M + ++ +Q + P+LKI V P + + R I+
Sbjct: 177 --NQLSVTEPVIHSVQMTMRENLYEFQGNQQSPYLKITVTNPKAIITVRSTIMSGAANYK 234
Query: 228 GL--GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCL 283
G+ G++ + N+ + LRFMID I G +W+EVP KY K S CQ+E
Sbjct: 235 GMWKGVEGEILTFDNIQYLLRFMIDTGISGMSWVEVPAAKYTVLPPGKCHSNCQIEASVH 294
Query: 284 YSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFI 343
Y D+I+ +GE++KMAP RILSFDIECAGRKG FP+P DPVIQ+AN+VT GE +PF+
Sbjct: 295 YRDMIAHPNDGEWAKMAPLRILSFDIECAGRKGIFPDPNIDPVIQIANIVTRYGESKPFV 354
Query: 344 RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
RNV + +C+ IV V+ FE E +L+AWRDF+ VDPDV+IGYNI FD PYL+E+ +
Sbjct: 355 RNVFVMDTCSSIVNTQVLEFEQEEKMLMAWRDFVERVDPDVIIGYNIANFDFPYLLERAE 414
>gi|320037710|gb|EFW19647.1| DNA polymerase delta catalytic subunit [Coccidioides posadasii str.
Silveira]
Length = 1110
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/621 (62%), Positives = 494/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 487 QKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 546
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA +++LVIPN+K E+ Y+GATV+E +Y+ PIATLD
Sbjct: 547 FLLSRGQQVKFISQLFRKALEQDLVIPNLKNENGEE-QYKGATVIEPVKDYYDVPIATLD 605
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KL L E TP+G+ F S ++KG+L +IL+
Sbjct: 606 FASLYPSIIQAHNLCYTTLLNKTSVEKLKLKKDEDYIVTPNGDMFCTSKVRKGLLSQILQ 665
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGA+ G+LPC+ I+SS T
Sbjct: 666 ELLSARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGITGASNGKLPCLAIASSTT 725
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMI TK VE +FT GY ++A+VIYGDTDSVMV+FGV + AMKLG+EAA++
Sbjct: 726 SYGRQMIMKTKDEVEARFTMANGYPYDAKVIYGDTDSVMVKFGVKDIAEAMKLGQEAANF 785
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F++PIKLEFEKVY+PYLLI+KKRYAGL+WTNP KFDKMD+KGIETVRRDNC LV+
Sbjct: 786 VSAKFLEPIKLEFEKVYFPYLLINKKRYAGLFWTNPNKFDKMDSKGIETVRRDNCRLVQT 845
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L KIL+DRD+ GA YVK TI+DLL N++D+S LVITK L+K+ DY K AHVE
Sbjct: 846 VIETVLKKILIDRDVKGAENYVKDTIADLLQNKVDMSKLVITKALSKS--DYSAKQAHVE 903
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP +GDRV YVI+K A G+K YE+SEDPIYVLENNIPIDT YYL+NQ+
Sbjct: 904 LAERMRKRDVGSAPTLGDRVAYVIVKGATGSKNYEKSEDPIYVLENNIPIDTKYYLDNQL 963
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+KPL RIF+PIL + S +LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK + +
Sbjct: 964 AKPLARIFDPILGERRSAQLLTGEHTRSISVAAPTLGGLMKFAKKTQTCMGCKKPLVDKD 1023
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +C +C+ R ELY KT+++V +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 1024 EKEGAVCENCRPRLGELYSKTLNKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIF 1083
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A+ +L R++
Sbjct: 1084 YMRMKAKKDVEDAERELARFD 1104
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/412 (37%), Positives = 220/412 (53%), Gaps = 48/412 (11%)
Query: 13 PPTPKESWPNKQQATTP---TTPVIDDEFLD-----------EDVFLDETL--LPEDEES 56
P +P + K +A P T P + D F + F++E L L +D
Sbjct: 25 PVSPNATKKRKLEADQPSIITRPRLQDGFRKAATPASSQSQHKSKFVEEVLEKLTQDISG 84
Query: 57 LILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGS 116
L + E+ Q +W RP L + S+ FQQ++ E P S G
Sbjct: 85 LKESNAEKDQ-------QWERPSLDD-FDPTRDSLCFQQIEA---------EEGPFS-GD 126
Query: 117 AAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKV 176
+R+FGVT GHSV V F+ Y Y++ P D F LE + N +
Sbjct: 127 QTAVRLFGVTETGHSVLLHVTDFKHYLYVAAPVSFTKSDCEPFGAYLENHV--GNHQT-- 182
Query: 177 PQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGL----GM 231
+ +++MV K ++ +Q + P+L+I V P + R ++ G GL G
Sbjct: 183 --VIHNVQMVMKENLFGFQGNQQHPYLRITVTDPKYINRVRSTIESGNANYRGLWKVGGT 240
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSY--CQLEFDCLYSDIIS 289
+T++ N+ + LRFMID I G +W+EVP KYR + Y CQ+E Y D+I+
Sbjct: 241 DGILTFD-NIQYILRFMIDTGISGMSWVEVPPSKYRIVPEHQRYSNCQIEAVVHYRDLIA 299
Query: 290 RHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTL 349
+GE++KMAP RILSFDIECAGRKG FPE DPVIQ+AN+VT GE +PF+RNV L
Sbjct: 300 HPHDGEWAKMAPLRILSFDIECAGRKGIFPEAHEDPVIQIANVVTRYGESKPFVRNVFVL 359
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
C+ IV ++ F+TE+++L+AWRDF+ +VDPDV+IGYNI FD PYL+++
Sbjct: 360 NGCSLIVNTQILDFKTEQEMLMAWRDFLEKVDPDVIIGYNIANFDFPYLLDR 411
>gi|312376112|gb|EFR23299.1| hypothetical protein AND_13138 [Anopheles darlingi]
Length = 1092
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/618 (63%), Positives = 490/618 (79%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQN + +TRRRLA+YCLKDAYLP RLL+KLM I NY+EMARVTGVP+S
Sbjct: 473 QKEDVHHSIITDLQNESEQTRRRLAMYCLKDAYLPLRLLNKLMCIVNYMEMARVTGVPLS 532
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK+K +IP+ + +GSE+ YEGATV+E + G+Y KPI+TLD
Sbjct: 533 CLLTRGQQIKVMSQLLRKSKVAGYLIPSYQSSGSEE-QYEGATVIEPKRGYYAKPISTLD 591
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMA+NLCY+TLV P KLNL P+ + TP+ FVK++++KG+LPEILE
Sbjct: 592 FASLYPSIMMAHNLCYTTLVQPNMKDKLNLTPDQLTHTPANNVFVKASVRKGLLPEILES 651
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRAKADLK DP +++VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 652 LLAARKRAKADLKVETDPFKRSVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 711
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE+TK+ VE ++T GYE++A VIYGDTDSVMV FGV T+E +M+LG+EAADY+
Sbjct: 712 YGRTMIEYTKQEVEQRYTVENGYENDAVVIYGDTDSVMVNFGVETLERSMELGKEAADYV 771
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F+KPIKLEFEKVYYPYLLI+KKRYAGLY+T P+++DKMD KGIETVRRDN LV NL
Sbjct: 772 SAKFVKPIKLEFEKVYYPYLLINKKRYAGLYFTRPDRYDKMDCKGIETVRRDNSPLVANL 831
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L++R+ GA++Y K TISDLL NR+D+S LVITK L+K+ DY K AHVEL
Sbjct: 832 MNNCLQKLLIERNPDGAIEYAKQTISDLLCNRIDISQLVITKELSKS--DYAAKQAHVEL 889
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +MRKRD AP +GDRVPYV+I AAK AY+++EDPIYVLEN IPID +YYLENQ+S
Sbjct: 890 ANKMRKRDPGNAPKLGDRVPYVLIAAAKNTPAYQKAEDPIYVLENCIPIDANYYLENQLS 949
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
KPLLRIFEPIL + ++ LL GDHTR+ S+ T + F K++ +C+GCKAL+ G
Sbjct: 950 KPLLRIFEPILGDKAESILLRGDHTRTRSVVTSKVGALAAFTKKRDACLGCKALLPVGQE 1009
Query: 937 --TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LC HC E LY ++ + LE F RLWT+CQ CQGSLH++V+CTSRDCPIFY
Sbjct: 1010 GSALCQHCAANEPILYQTELAAQRTLEERFCRLWTECQRCQGSLHEEVICTSRDCPIFYM 1069
Query: 995 RKKAQKDMAEAKLQLDRW 1012
R K + ++ + ++ R+
Sbjct: 1070 RTKIRMELETQEKRVARF 1087
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 153/339 (45%), Positives = 221/339 (65%), Gaps = 14/339 (4%)
Query: 73 AKWARP---PLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREG 129
+KW+RP PL +++FQQ+DID+ IG + G ++R+FGVT EG
Sbjct: 63 SKWSRPAPEPLDQS----TDALIFQQIDIDHYIGRPMPGMPGAQIGPVPVMRMFGVTMEG 118
Query: 130 HSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQ 187
+SVC VHGF PY YI+ P+G +S F L+ + R++K V + V + +V+
Sbjct: 119 NSVCAHVHGFSPYLYIAAPRGFTKAHLSEFRTALDKSVLNDMRSNKENVQEAVLDVALVE 178
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRF 247
++SIM Y + F+K+ VALP ++A+ + +L++ L + + YESN+ F +RF
Sbjct: 179 RQSIMGYNGEDKFQFIKVTVALPRLLAAVKRLLEKEQMLPSMDFQDCRVYESNIDFDIRF 238
Query: 248 MIDCNIVGGNWIEVPVGK--YRKTAKT---LSYCQLEFDCLYSDIISRHPEGEFSKMAPF 302
M+D +VG +WIE+P G YRK K + CQ+E D Y I+ PEGE++K+AP
Sbjct: 239 MVDRGVVGCSWIELPPGTWYYRKKGKMPAPETRCQIEVDVAYDAFIAHEPEGEWAKVAPL 298
Query: 303 RILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMS 362
RILSFDIECAGRKG FPEP HDPVIQ+AN+V QGE++PF+RNV TL +CAPIVG V+S
Sbjct: 299 RILSFDIECAGRKGIFPEPQHDPVIQIANMVIRQGEQEPFLRNVFTLNTCAPIVGAQVLS 358
Query: 363 FETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ TE+++L W +F+RE+DPD++ GYNI FD+PYL+ +
Sbjct: 359 YNTEQELLDQWANFVRELDPDILTGYNINNFDIPYLLNR 397
>gi|398408323|ref|XP_003855627.1| DNA polymerase delta catalytic subunit [Zymoseptoria tritici IPO323]
gi|339475511|gb|EGP90603.1| hypothetical protein MYCGRDRAFT_35747 [Zymoseptoria tritici IPO323]
Length = 1107
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/621 (62%), Positives = 493/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 484 QKEDVHHTMITELYNGTPESRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 543
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LLSRGQ +K +SQL RKA ++ LV+PN+K GS++ YEGATV+E G+Y+ P+ATLD
Sbjct: 544 MLLSRGQQVKFISQLFRKALEQQLVVPNLKPEGSDE-QYEGATVIEPTRGYYDVPVATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TL+ KLNL E TP+G+ F + ++KG+L +ILE
Sbjct: 603 FASLYPSIMQAHNLCYTTLLNKNAVEKLNLKKDEDYIVTPNGDLFCTTKVRKGLLSQILE 662
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARKRAK L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+ I+SS T
Sbjct: 663 ELLGARKRAKKALAVETDPFKKAVLNGRQLALKISANSVYGLTGATNGKLPCLAIASSTT 722
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE+++T GY H+A+VIYGDTDSVMV+FG + AM+LG++AA+Y
Sbjct: 723 SYGRQMIERTKEEVENRYTIANGYSHDAQVIYGDTDSVMVKFGPNDLAKAMELGQDAAEY 782
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVYYPYLLI+KKRYAGLYWTN EK+DKMDTKGIETVRRDNC LV+N
Sbjct: 783 VSSKFIKPIKLEFEKVYYPYLLINKKRYAGLYWTNTEKYDKMDTKGIETVRRDNCRLVQN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L +L+D+D+ GA YVK TIS+LL NR+D+S LVITK L+K DY K AH E
Sbjct: 843 VIETSLKMLLIDQDVQGAQDYVKETISELLQNRIDMSNLVITKALSKV--DYASKQAHTE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YV++K A GAK YE+SEDP++VLE+N+PIDT YYL+NQ+
Sbjct: 901 LAERMRKRDAGSAPALGDRVAYVMVKGAAGAKGYEKSEDPMFVLEHNLPIDTKYYLDNQL 960
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+KPL RIFEPIL + + LL+GDHTR+IS++ P+ G+MKFAK+ +C+GCK +S+
Sbjct: 961 AKPLGRIFEPILGEKKAGSLLTGDHTRAISVAAPTMGGLMKFAKKTETCLGCKKPLSSKE 1020
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G + + C+ R ELY +++++V ELEV F RLWTQCQ CQGS+H +V+C+SRDCPIF
Sbjct: 1021 EQGGAVGAECRPRFGELYQRSLTKVSELEVRFARLWTQCQRCQGSMHNEVICSSRDCPIF 1080
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A +++R++
Sbjct: 1081 YMRMKAKKDVEDAGKEIERFD 1101
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 203/368 (55%), Gaps = 36/368 (9%)
Query: 44 FLDETL--LPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYV 101
F +E L L +D ++L ++ E+ Q WARP L S + + ++ FQ +D +
Sbjct: 67 FEEEVLERLTQDIDALKHKNAEKDQ-------HWARPSLDS-FNDKTDTVSFQSIDAEE- 117
Query: 102 IGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQ 161
G A +++FGVT EGHSV V F Y Y++ P +D F
Sbjct: 118 ---------GTLHGGKATVKLFGVTEEGHSVLLHVTDFLHYLYVAAPIAFTKNDCEPFKV 168
Query: 162 ILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD 221
LE + + + ++ ++MV + ++ +Q P+LKI V P + R ++
Sbjct: 169 FLESSLAQHS------AAIQSVQMVMRENMFGFQGNTKSPYLKITVTDPKFINRLRTTIE 222
Query: 222 RG-IQLDGL---GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA--KTLSY 275
G GL +T++S + + LRFM+D I G +W+ V GKY S
Sbjct: 223 SGNANYKGLWKVAEGGILTFDS-IQYVLRFMVDTEISGMSWVSVNAGKYHMIPMRDRQSN 281
Query: 276 CQLEFDCLYSDIISRHP--EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLV 333
CQ+E C + D+I+ HP + E+SKMAP RILSFDIECAGRKG FPE DPVIQ+AN+V
Sbjct: 282 CQIEAHCHFRDMIA-HPADDAEWSKMAPLRILSFDIECAGRKGVFPEANIDPVIQIANVV 340
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
T GE++PF+RNV + +C+ IV V F +E +L+AWRDF+ EVDPDV+IGYN F
Sbjct: 341 TRYGEEKPFVRNVFCMDTCSLIVNTQVFEFHSEEKMLMAWRDFLEEVDPDVIIGYNTSNF 400
Query: 394 DLPYLIEK 401
D PYL+++
Sbjct: 401 DFPYLLDR 408
>gi|453087535|gb|EMF15576.1| DNA polymerase delta catalytic subunit [Mycosphaerella populorum
SO2202]
Length = 1107
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/621 (61%), Positives = 492/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 484 QKEDVHHTMITELYNGTPESRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 543
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLS+GQ +K +SQL RKA ++ LV+P++K GS++ YEGATV+E G+Y+ PIATLD
Sbjct: 544 FLLSKGQQVKFISQLFRKALEQQLVVPDLKSEGSDE-QYEGATVIEPTRGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TL+ KLNL E TP+G+ F + ++KG+L +ILE
Sbjct: 603 FASLYPSIMQAHNLCYTTLLNKNAIAKLNLKKDEDYIVTPNGDLFCTTKVRKGLLSQILE 662
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS T
Sbjct: 663 ELLGARKRAKKELAIETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLAIASSTT 722
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK+ VE ++T GY H+A+VIYGDTDSVMV+FG + AM+LG +AADY
Sbjct: 723 AYGRQMIEKTKEEVEARYTIANGYSHDAQVIYGDTDSVMVKFGPNDLAKAMELGNDAADY 782
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVYYPYLLI+KKRYAGLYWT P+K+DKMDTKGIETVRRDNC LV+N
Sbjct: 783 VSNKFIKPIKLEFEKVYYPYLLINKKRYAGLYWTKPDKWDKMDTKGIETVRRDNCRLVQN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ L +L+D+D+ GA YVK TIS+LL R+DLS LVITK L+KT DY K AH E
Sbjct: 843 LIETSLKMLLIDQDVQGAQDYVKETISELLQGRIDLSNLVITKALSKT--DYANKQAHTE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YV++K A G+K +E+SEDPI+VLENN+PIDT YYL+NQ+
Sbjct: 901 LAERMRKRDAGSAPALGDRVAYVMVKGAAGSKGWEKSEDPIFVLENNMPIDTKYYLDNQL 960
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + + LL+G+HTRS+++S P+ G+MKFAK+ +C+GCK +
Sbjct: 961 AKPLGRIFEPILGEKKAASLLTGEHTRSVTVSAPTMGGLMKFAKKTETCLGCKKPLTMKE 1020
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
S G + + C+ R ELY +++++ ELE+ F RLWTQCQ CQGS+H +V+C+SRDCPIF
Sbjct: 1021 ESGGAVGAECRPRFGELYQRSLTKTAELEIRFARLWTQCQRCQGSMHNEVICSSRDCPIF 1080
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A +++R++
Sbjct: 1081 YMRMKAKKDVEDAAKEIERFD 1101
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 132/358 (36%), Positives = 203/358 (56%), Gaps = 27/358 (7%)
Query: 53 DEESL--ILRDIEQ-RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
+EE L + +DI+ + + A + +WARP L G+ ++ ++ FQ +D N E
Sbjct: 69 EEEVLEKLTQDIDALKHNNAEKDQQWARPSLD-GFDAKTDTLSFQCID--------NEE- 118
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
G +++FGVT +G+SV V F Y Y++ P +D + LE + +
Sbjct: 119 -GTLQGGKTTVKLFGVTEQGNSVLLHVTDFLHYLYVAAPIAFTKNDCEPYKVFLESTLAQ 177
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDG 228
+ + ++MV + ++ +Q P+LKI V P ++ R + G G
Sbjct: 178 HS------AVIHSVQMVLRENLFGFQGNTKSPYLKITVTDPKYISRLRTAIQGGSANYKG 231
Query: 229 LGMKS---FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCL 283
L + +T++ N+ + LRFMID ++ G +W+ V KY + S CQ+E C
Sbjct: 232 LWKAAEGGILTFD-NIQYVLRFMIDTSLAGMSWVSVNAAKYHMVPQQDRQSQCQIEAYCH 290
Query: 284 YSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFI 343
Y D+I+ +GE+SKMAP R+LSFDIECAGRKG FPE + DPVIQ+AN+VT GE +PF+
Sbjct: 291 YRDLIAHPIDGEWSKMAPLRVLSFDIECAGRKGVFPEASIDPVIQIANVVTRYGEAKPFV 350
Query: 344 RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
RNV + + + IV + F+ E +L+AWRDF+ EVDPDV+IGYNI FD PYL+++
Sbjct: 351 RNVFCMDTVSSIVNTQLFEFDQEEKMLMAWRDFLEEVDPDVIIGYNIANFDFPYLLDR 408
>gi|402085670|gb|EJT80568.1| DNA polymerase delta catalytic subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1104
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/623 (62%), Positives = 489/623 (78%), Gaps = 12/623 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 480 QKEDVHYTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLS+GQ IK +SQ+ RKA ++ LV+PN++ GS+ YEGATV+E G+Y+ PIATLD
Sbjct: 540 FLLSKGQQIKFVSQMFRKALEQKLVVPNLRVEGSDD-QYEGATVIEPTRGYYDAPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPE--DARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
FASLYPSIM A+NLCY+TL++ + DA KL E TP+G+ FV +KG+L +IL
Sbjct: 599 FASLYPSIMQAHNLCYTTLISQKAIDAFKLE-KDEDYTVTPTGDMFVTVKRRKGLLAQIL 657
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
EELL+ARK+AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+ PC++I+SS
Sbjct: 658 EELLSARKQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATNGKFPCLQIASST 717
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TSYGRQMIE TK+ VE K+ GY H+A+VIYGDTDSVMV+FG + AMKLG EAA
Sbjct: 718 TSYGRQMIEKTKQEVEAKYRIANGYSHDAQVIYGDTDSVMVKFGTKDLAEAMKLGEEAAQ 777
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
Y+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 778 YVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQ 837
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ + L IL+D+D+ GA YVK TI+DLL N++D+S LVITK LTK DDY K AHV
Sbjct: 838 TVIEKVLRMILIDQDVLGAQDYVKETIADLLQNKVDMSKLVITKALTK--DDYTAKQAHV 895
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA+RM+KRDA +AP +GDRV YV++K A G+K +ERSEDPIYVLENN+PIDT YYL+NQ
Sbjct: 896 ELAQRMKKRDAGSAPGLGDRVAYVMVKGAAGSKNFERSEDPIYVLENNVPIDTKYYLDNQ 955
Query: 878 ISKPLLRIFEPILKNA-SKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--- 933
+SKPL RIFEPIL + +K LL GDHTRSIS+ PS G+MKFAK+ +C+ CK +
Sbjct: 956 LSKPLGRIFEPILGDTKAKSLLMGDHTRSISVVAPSVGGLMKFAKKTQTCMACKKPLTSK 1015
Query: 934 --SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
S G +C GR ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPI
Sbjct: 1016 EESQGAVCGDDAGRVGELYKKTLDRVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPI 1075
Query: 992 FYRRKKAQKDMAEAKLQLDRWNF 1014
FY R KA+KD+ + +L R++F
Sbjct: 1076 FYMRMKAKKDLEDGNKELKRFDF 1098
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 195/364 (53%), Gaps = 40/364 (10%)
Query: 55 ESLILRDIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
ES +L + Q +Q + W RPP+ + ++ FQ ++ +
Sbjct: 64 ESEVLEKLSQDISELKQTNTEKDQAWGRPPVPRDFAPATSNLCFQSIEAEE--------- 114
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
G A +++FGVT +G+SV V F+ Y Y++ P +D S F LE
Sbjct: 115 -GTLHGGQATVKLFGVTEQGNSVMLHVKDFKHYLYVAAPSTFSKEDCSSFKTFLE----- 168
Query: 170 ANRNSKVPQFVRHIEMVQK--RSIMY-YQQQKSQPFLKIVVALPTMVASCRGILDRG--- 223
+ V Q I VQ R MY +Q PF+K+ V P + + R ++ G
Sbjct: 169 ----TGVAQHQPAIHSVQLTLRENMYGFQNNTQNPFIKVTVTDPKHINTVRTTIESGRAN 224
Query: 224 ----IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQ 277
+ DG G+ +F N+ + LRFM+DC+I G +W+E P Y ++ S CQ
Sbjct: 225 WKGMWRNDGSGIMTF----DNIQYVLRFMVDCHIQGMSWVEAPAAAYSLIHASQKQSNCQ 280
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 337
+E + Y D+++ P G++SKMAP RILSFDIECAGRKG FPE DPVIQ+AN+VT G
Sbjct: 281 IEAEISYRDLVAHKPVGDWSKMAPLRILSFDIECAGRKGIFPEAEIDPVIQIANVVTRYG 340
Query: 338 EKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY 397
+K+PF+RNV L + IV ++ F E +L AWRDF+ EVDPD++ GYNIC FD PY
Sbjct: 341 DKKPFVRNVFCLDQTSSIVATQILEFSQEEKMLRAWRDFLVEVDPDIITGYNICNFDFPY 400
Query: 398 LIEK 401
L+ +
Sbjct: 401 LLNR 404
>gi|296234423|ref|XP_002762441.1| PREDICTED: DNA polymerase delta catalytic subunit [Callithrix
jacchus]
Length = 1107
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/618 (63%), Positives = 488/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+AKQ+ L++P V+ G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAKQEGLLMPVVRSEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELARETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 962
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR+ CIGC+ ++S+
Sbjct: 963 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLSHQ 1022
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1023 GAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1082
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1083 KKVRKDLEDQEQLLRRFG 1100
Score = 327 bits (837), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 216/336 (64%), Gaps = 12/336 (3%)
Query: 74 KWARP---PLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTRE 128
+W RP PL Q + ++FQQL+ID+ +G + PLS GS ++R FGVT E
Sbjct: 78 RWLRPTPAPLDP----QTEPLIFQQLEIDHYVGPAQSVPGGPPLSRGSVPVLRAFGVTDE 133
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMV 186
G SVCC VHGF PYFY P G GP+ + + L + NR K V +E+
Sbjct: 134 GVSVCCHVHGFAPYFYTPAPPGFGPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELC 193
Query: 187 QKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALR 246
+ SI Y PFL+I +ALP +VA R +L++GI++ GLG SF YE+NV F +R
Sbjct: 194 SRESIFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIR 253
Query: 247 FMIDCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRIL 305
FM+D +IVG NW+E+P GKY + + + CQLE D L+SD++S PEG + ++AP R+L
Sbjct: 254 FMVDTDIVGCNWLELPAGKYALRLKEKATQCQLEADVLWSDVVSHPPEGPWQRIAPLRVL 313
Query: 306 SFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFET 365
SFDIECAGRKG FPEP DPVIQ+ +L GE++PF+R +TL+ CAPI+G V S+E
Sbjct: 314 SFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTLRPCAPILGAKVQSYEK 373
Query: 366 ERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW F+R +DPDV+ GYNI FDLP+LI +
Sbjct: 374 EEDLLQAWATFVRIMDPDVITGYNIQNFDLPFLISR 409
>gi|322703524|gb|EFY95132.1| DNA polymerase delta catalytic subunit [Metarhizium anisopliae ARSEF
23]
Length = 1104
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/623 (62%), Positives = 491/623 (78%), Gaps = 11/623 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 479 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 538
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ IK +SQL RKA ++ LVIPN++ S++ YEGATV+E G+Y+ PIATLD
Sbjct: 539 FLLSRGQQIKFVSQLFRKALEQKLVIPNIRSDASDE-QYEGATVIEPVRGYYDVPIATLD 597
Query: 520 FASLYPSIMMAYNLCYSTLVTPED-ARKLNL-PPECVNKTPSGETFVKSNLQKGILPEIL 577
FASLYPSI+ A+NLCY+TLV + K L E TP+G+TFV + +KG+L +IL
Sbjct: 598 FASLYPSIIQAHNLCYTTLVKDKKLIEKFGLVKDEDYIVTPNGDTFVTTKQRKGLLAQIL 657
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
EELL ARK+AK +L + DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS
Sbjct: 658 EELLTARKQAKRELAQETDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLEIASST 717
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TS+GRQMIE TK VE K+ GY H+A+VIYGDTDSVMV+FG + AMKLG EA+
Sbjct: 718 TSFGRQMIERTKDEVEKKYNIANGYTHDAQVIYGDTDSVMVKFGTKDLAEAMKLGEEASH 777
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
Y+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 778 YVSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTRPEKYDKMDTKGIETVRRDNCLLVQ 837
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ + L IL+DRD+ GA +YVK TI+ LL N++D+S LVITK LTK DDY K AHV
Sbjct: 838 TVIEKVLRMILIDRDVGGAQEYVKDTIASLLQNKVDMSKLVITKALTK--DDYAAKQAHV 895
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA RM+KRDA +AP +GDRV YV+++ A GAK +E+SEDP+YVLENN+PIDT YYL+NQ
Sbjct: 896 ELAHRMKKRDAGSAPALGDRVAYVMVRGAAGAKNFEKSEDPLYVLENNVPIDTKYYLDNQ 955
Query: 878 ISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--- 933
++KPL RIFEPIL + ++ LL+GDHTR+IS++ P+ G+MKFAK+ +C+GCK +
Sbjct: 956 LAKPLGRIFEPILGETKARTLLTGDHTRTISVAAPTVGGLMKFAKKTQTCMGCKKPLTGK 1015
Query: 934 --SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
SNG +CS C R ELY +T+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPI
Sbjct: 1016 HESNGAVCSDCAPRVGELYKRTLDKVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPI 1075
Query: 992 FYRRKKAQKDMAEAKLQLDRWNF 1014
FY R KA+KD+ +A L R++
Sbjct: 1076 FYMRMKAKKDLEDAGKDLSRFDM 1098
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 188/339 (55%), Gaps = 25/339 (7%)
Query: 69 ASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTRE 128
A + W RPP+ + Q S+ FQ ++ + G A +++FGV+ E
Sbjct: 84 AEKDQAWDRPPVVD-FEPQRDSLCFQSIEAEE----------GTLHGGKATVKLFGVSEE 132
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQK 188
G+SV V F+ Y Y+ P P D+ ++ LEG++ + + + ++ +
Sbjct: 133 GYSVMLHVTDFKHYLYVRAPVLFQPHDVGNYKTFLEGQIAQHQ------PAIHSVALLFR 186
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM----KSFMTYESNVLFA 244
I + + +LK+ V P + R ++ G + GM + TY+ N+ +
Sbjct: 187 EDIYGFSGNEQHAYLKVTVTDPKFINKVRSTIESG-NANWKGMWGVTEGIRTYD-NIQYV 244
Query: 245 LRFMIDCNIVGGNWIEVPVGKYRKTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPF 302
LRFM+DC + G W+E P +Y+ + L S CQ+E + Y D+I+ PEG+++KMAP
Sbjct: 245 LRFMVDCKVQGMAWVEAPATRYKIVPENLRQSNCQIEAEVPYLDLIAHKPEGKWAKMAPL 304
Query: 303 RILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMS 362
RILSFDIECAGRKG FPE DPVIQ+AN+VT GEK+PFIRNV L + + IV ++
Sbjct: 305 RILSFDIECAGRKGIFPEANQDPVIQIANVVTKYGEKKPFIRNVFCLDTTSSIVATQILE 364
Query: 363 FETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++ E +L W+ F+ DPD++IGYNI FD PYL+E+
Sbjct: 365 YQKEERMLSEWQQFLIRADPDIIIGYNIANFDFPYLLER 403
>gi|322693697|gb|EFY85548.1| DNA polymerase delta catalytic subunit [Metarhizium acridum CQMa 102]
Length = 1104
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/623 (62%), Positives = 492/623 (78%), Gaps = 11/623 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 479 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 538
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ IK +SQL RKA ++ LVIPN++ S++ YEGATV+E G+Y+ PIATLD
Sbjct: 539 FLLSRGQQIKFVSQLFRKALEQKLVIPNIRSDASDE-QYEGATVIEPVRGYYDVPIATLD 597
Query: 520 FASLYPSIMMAYNLCYSTLVTPED-ARKLNL-PPECVNKTPSGETFVKSNLQKGILPEIL 577
FASLYPSI+ A+NLCY+TLV + K L E TP+G+TFV + +KG+L +IL
Sbjct: 598 FASLYPSIIQAHNLCYTTLVKDKKLIEKFGLVKDEDYIVTPNGDTFVTTKQRKGLLAQIL 657
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
EELL ARK+AK +L + DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS
Sbjct: 658 EELLTARKQAKRELAQETDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLEIASST 717
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TS+GRQMIE TK VE K+ GY H+A+VIYGDTDSVMV+FG + AMKLG EA+
Sbjct: 718 TSFGRQMIERTKDEVEKKYNIANGYTHDAQVIYGDTDSVMVKFGTKDLAEAMKLGEEASH 777
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
Y+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 778 YVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTRPEKYDKMDTKGIETVRRDNCLLVQ 837
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ + L IL+DRD+ GA +YVK TI++LL N++D+S LVITK LTK DDY K AHV
Sbjct: 838 TVIEKVLRMILIDRDVSGAQEYVKETIANLLQNKVDMSKLVITKALTK--DDYAAKQAHV 895
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA RM+KRDA +AP +GDRV YV+++ A GAK +E+SEDP+YVLENN+PIDT YYL+NQ
Sbjct: 896 ELAHRMKKRDAGSAPALGDRVAYVMVRGAAGAKNFEKSEDPLYVLENNVPIDTKYYLDNQ 955
Query: 878 ISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--- 933
++KPL RIFEPIL + ++ LL+GDHTR+IS++ P+ G+MKFAK+ +C+GCK +
Sbjct: 956 LAKPLGRIFEPILGETKARTLLTGDHTRTISVAAPTVGGLMKFAKKTQTCMGCKKPLTGK 1015
Query: 934 --SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
SNG +CS C R ELY +++ +V +LE+ FGRLWTQCQ CQGS+H +V+C+S+DCPI
Sbjct: 1016 HESNGAVCSDCAPRVGELYKRSLDKVSDLEIRFGRLWTQCQRCQGSMHCEVICSSKDCPI 1075
Query: 992 FYRRKKAQKDMAEAKLQLDRWNF 1014
FY R KA+KD+ +A L R++
Sbjct: 1076 FYMRMKAKKDLEDAGKDLSRFDM 1098
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 188/339 (55%), Gaps = 25/339 (7%)
Query: 69 ASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTRE 128
A + W RPP++ + Q S+ FQ ++ + G A +++FGV+ E
Sbjct: 84 AEKDQAWDRPPVTD-FEPQRDSLCFQSIEAEE----------GTLHGGKATVKLFGVSEE 132
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQK 188
G+SV V F+ Y Y+ P P D+ ++ LE ++ + + + ++ +
Sbjct: 133 GYSVMLHVTDFKHYLYLRAPVLFQPHDVGNYKAFLETQVAQHQ------PAIHSVALLFR 186
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM----KSFMTYESNVLFA 244
I + + +LKI V P + R ++ G + GM + TY+ N+ +
Sbjct: 187 EDIYGFWGNEQHAYLKITVTDPKFINRVRSTIEGG-NANWKGMWGVTEGIRTYD-NIQYV 244
Query: 245 LRFMIDCNIVGGNWIEVPVGKYRKTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPF 302
LRFM+DC + G W+E P +Y+ + L S CQ+E + Y D+I+ PEG+++KMAP
Sbjct: 245 LRFMVDCKVQGMAWVEAPATRYKIVPENLRQSNCQIEAEVPYLDLIAHKPEGKWAKMAPL 304
Query: 303 RILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMS 362
RILSFDIECAGRKG FPE DPVIQ+AN+VT GEK+PFIRNV L + + IV ++
Sbjct: 305 RILSFDIECAGRKGIFPEANQDPVIQIANVVTKYGEKKPFIRNVFCLDTTSSIVATQILE 364
Query: 363 FETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++ E +L W+ F+ DPD++IGYNI FD PYL+E+
Sbjct: 365 YKKEDKMLSEWQQFLIRADPDIIIGYNIANFDFPYLLER 403
>gi|328855214|gb|EGG04342.1| hypothetical protein MELLADRAFT_53062 [Melampsora larici-populina
98AG31]
Length = 1067
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/621 (61%), Positives = 487/621 (78%), Gaps = 11/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++LQNGN+E+RRRLAVYCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 446 QKEDVHHTMITELQNGNSESRRRLAVYCLKDAYLPQRLMDKLMCFVNYTEMARVTGVPFN 505
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL R+A + + ++P +K GS+ ++GA V++ G+Y+ PIATLD
Sbjct: 506 YLLSRGQQIKVVSQLYRRAGEFSYIVPAMKYEGSDD-QFDGAIVMDPIRGYYDVPIATLD 564
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+NLCY+TL + A++L L E TP+G+ FVK++ +KG+L +LE
Sbjct: 565 FASLYPSIMMAHNLCYTTLTDAKTAKQLGLVENEDYIITPNGDYFVKTSKRKGLLAIVLE 624
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+LL+ARKRA+A+LK DP +KAVLDGRQLALK+SANSVYGFTGATVG+LPC+ I SVT
Sbjct: 625 DLLSARKRARAELKLETDPFKKAVLDGRQLALKVSANSVYGFTGATVGKLPCLPIPMSVT 684
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GR+MI+ TK VE +T GYEH+A+VIYGDTDSVMV+FG + +M+LG EAAD
Sbjct: 685 AFGREMIKTTKAEVEATYTKANGYEHDAQVIYGDTDSVMVRFGCKDLATSMRLGAEAADL 744
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLISKKRYAGLYWT PEK DKMD KGIETVRRDNC LV+
Sbjct: 745 VSTKFVKPIKLEFEKVYFPYLLISKKRYAGLYWTKPEKHDKMDAKGIETVRRDNCRLVQT 804
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DRD+ GA Y K I+DLL N++DLS LVITK L K+ DY K AHVE
Sbjct: 805 VIETCLKKMLIDRDVQGAEDYTKQVIADLLQNKVDLSQLVITKALAKS--DYAAKQAHVE 862
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YVIIK K A+AYE+SEDP+YVLENN+PIDT YYLENQ+
Sbjct: 863 LAKRMKKRDAGSAPALGDRVAYVIIKGPKDARAYEKSEDPLYVLENNLPIDTKYYLENQL 922
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS---- 934
SKPL+RIFEPIL + LL+GDHTR ++I+TP+ G+M F KR +C+GC+ +
Sbjct: 923 SKPLMRIFEPILGEKASSLLAGDHTRIVTIATPTQGGLMGFVKRTETCLGCRTPLPKSTG 982
Query: 935 ---NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
N +C +C+ + AELY K ++ Q E + RLWTQCQ CQGSLHQDV+CT++DCPI
Sbjct: 983 KGMNTAVCKNCRPKTAELYTKQMALTQGFETAYSRLWTQCQRCQGSLHQDVICTAKDCPI 1042
Query: 992 FYRRKKAQKDMAEAKLQLDRW 1012
FY RKK+QKD A++ L R+
Sbjct: 1043 FYMRKKSQKDAADSHSVLQRF 1063
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/349 (40%), Positives = 184/349 (52%), Gaps = 38/349 (10%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
++W RP L S QSI+FQQ+DID S + +RIFG+T +GHSV
Sbjct: 40 SQWGRPALPPIDPSS-QSIIFQQIDID-----------EQSQSNIPQLRIFGITEQGHSV 87
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIM 192
V F PY ++ P+ D L + + V + + K S+
Sbjct: 88 LAHVQDFLPYLWVPAPKDWQNSDCKDLTAALNSSLSMGTKP------VHSVTVAHKLSLW 141
Query: 193 YYQQQKSQPFLKIVVA------------LPTMVASCR------GILDRGIQLDGLGMKSF 234
Y PFLKI + ++ C G +RG +
Sbjct: 142 GYTGDTKSPFLKISLTDFKHMGRVRRTCTTALLTFCSRELFEIGAFERGEVNFRDKFQPC 201
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHP 292
T+ESN+ + LRFMID I G NWIE+P G Y R K S CQ+E D IIS P
Sbjct: 202 TTFESNISYTLRFMIDKKITGMNWIEIPAGTYQLRSPGKQASKCQIELDTSSDTIISHAP 261
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSC 352
EGE+SKMAPFR+LS+DIECAGRKG FPE DPVIQ+ANLVT G PFIRNV TL +C
Sbjct: 262 EGEWSKMAPFRVLSYDIECAGRKGIFPEAKIDPVIQIANLVTCHGSSTPFIRNVFTLDTC 321
Query: 353 APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
A IVG V+ F+ E D+L W+ F+ E DPD++IGYN FD+PYL+++
Sbjct: 322 AHIVGSQVIEFKKEEDMLAKWQLFVEECDPDLVIGYNTTNFDMPYLLDR 370
>gi|358401350|gb|EHK50656.1| hypothetical protein TRIATDRAFT_53190 [Trichoderma atroviride IMI
206040]
Length = 1103
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/621 (61%), Positives = 492/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 479 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCMENYTEMARVTGVPFN 538
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ IK +SQL RKA ++ LVIPN+ G+E YEGATV+E G+Y+ PIATLD
Sbjct: 539 FLLSRGQQIKFVSQLFRKALEQKLVIPNIAPQGTE-AQYEGATVIEPTRGYYDVPIATLD 597
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ P DA + L + TP+G+ FV + +KG+L +ILE
Sbjct: 598 FASLYPSIIQAHNLCYTTLLRPGDAERFKLEKDVDYIITPNGDQFVTAAKRKGLLAQILE 657
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARK+AK +L + DP +KAVL+GRQLALK+SANSVYG TGAT G+LPC+ I+SS T
Sbjct: 658 ELLSARKQAKRELAQETDPFKKAVLNGRQLALKVSANSVYGLTGATTGKLPCLAIASSTT 717
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMIE TK+ VE+++ GY H+A+VIYGDTDSVMV+FG + AMKLG EA+ +
Sbjct: 718 SFGRQMIEKTKREVEERYNIANGYAHDAQVIYGDTDSVMVKFGTKDLAEAMKLGEEASKF 777
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT EK+DKMDTKG+ETVRRDNCLL +
Sbjct: 778 VSDKFLKPIKLEFEKVYFPYLLINKKRYAGLYWTRTEKYDKMDTKGLETVRRDNCLLAQT 837
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+DRD+ GA YVK+TI+DLL N++D+S LVITK LTK +DY K AHVE
Sbjct: 838 VIEKVLRMILIDRDVQGAQDYVKNTIADLLQNKIDMSKLVITKALTK--EDYAAKQAHVE 895
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV+++ A GAK +E+SEDPIYVLENN+PIDT YYL+NQ+
Sbjct: 896 LAQRMKKRDAGSAPGLGDRVAYVMVRGAAGAKNFEKSEDPIYVLENNVPIDTKYYLDNQL 955
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + ++ LL+GDHTR IS++ P+ G+MKFAK+ +C+GCK +
Sbjct: 956 AKPLGRIFEPILGETKARSLLNGDHTRIISVAAPTVGGLMKFAKKTQTCMGCKKPLTGQH 1015
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
S G +CS C R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1016 ESAGAVCSDCAPRVGELYNKTLDRVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1075
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A +L R++
Sbjct: 1076 YMRMKAKKDLEDAGKELSRFD 1096
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 132/349 (37%), Positives = 194/349 (55%), Gaps = 32/349 (9%)
Query: 63 EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRI 122
E++Q+ + W RPP++ +V S+ FQ ++ + D G +++
Sbjct: 77 ERKQNNTEKDQAWDRPPVTD-FVPSRDSLTFQSIEAEEGTLD----------GGKVTVKL 125
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRH 182
FGVT EGHSV V F+ Y Y++ P P D + F LE ++ + +
Sbjct: 126 FGVTMEGHSVMLHVTDFKHYLYVAAPMSFQPKDCALFKAYLETQVAQHQ------PAIHS 179
Query: 183 IEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQ--------LDGLGMKSF 234
+ + + I +YQ P+LKI V P + S R +++G LDG G++++
Sbjct: 180 VSLAMREDIYHYQGNVQSPYLKITVTDPKFINSVRSTIEKGFANWKGMWGVLDG-GLRTY 238
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK--TLSYCQLEFDCLYSDIISRHP 292
N+ + LRFM+DC I G +W+E P Y + S CQ+E + Y D+I+ P
Sbjct: 239 ----DNIQYVLRFMVDCKIQGMSWVEAPASSYSLIPEHSKQSNCQIEAEINYVDLIAHKP 294
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSC 352
EGE++KMAP RILSFDIECAGRKG FPE DPVIQ+AN+VT GEK+PFIRNV L +
Sbjct: 295 EGEWAKMAPLRILSFDIECAGRKGIFPEADMDPVIQIANVVTKYGEKKPFIRNVFCLDTT 354
Query: 353 APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ IV ++ +E E +L W+ F+ VDPDV+ GYNI FD PYL+++
Sbjct: 355 SSIVATQILDYEKEEKMLHEWQQFLVRVDPDVITGYNISNFDFPYLLDR 403
>gi|324120704|dbj|BAJ78743.1| DNA polymerase delta catalytic subunit [Phraortes illepidus]
Length = 1093
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/616 (63%), Positives = 491/616 (79%), Gaps = 8/616 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN++TRRRLAVYCLKDAYLP RLLDKLM I NY+EM+RVTGV ++
Sbjct: 478 QKEDVHHSIITDLQNGNSQTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMSRVTGVSLA 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKA++K ++P V +G ++ +EGATV+E R G+Y PI TLD
Sbjct: 538 CLLTRGQQIKVVSQLLRKAREKGYLMP-VYASGVQEEQFEGATVIEPRKGYYSDPITTLD 596
Query: 520 FASLYPSIMMAYNLCYSTLVT-PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TLV P D KL+L P+ KTP+ TFVKS+++KG+LPEILE
Sbjct: 597 FSSLYPSIMMAHNLCYTTLVNGPPD--KLSLTPDQYIKTPASCTFVKSSVRKGLLPEILE 654
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL+ARK+AK DLK DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 655 SLLSARKKAKVDLKNETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVT 714
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MIE TK+ VE ++ GY+H+A VIYGDTDSVMV+FGV T+E AM+LGREAADY
Sbjct: 715 AYGRTMIEQTKQEVEQRYCIANGYKHDASVIYGDTDSVMVKFGVTTLEEAMELGREAADY 774
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ F++PI+LEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDNC LV N
Sbjct: 775 VTSKFVRPIQLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGIETVRRDNCPLVAN 834
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L++RD GAV Y K ISDLL NR+D+S LVITK LTK +DY K AHVE
Sbjct: 835 MMNTCLQKLLIERDPDGAVTYTKEVISDLLCNRVDISKLVITKELTK--NDYAAKQAHVE 892
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA +M+KRD AP +GDRVPYVIIKAAK AY ++EDPIYVLEN+IPID+ YYLENQ+
Sbjct: 893 LANKMKKRDPGNAPKLGDRVPYVIIKAAKNTPAYMKAEDPIYVLENSIPIDSTYYLENQL 952
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT 937
SKPLLRIF PIL + A LL GDHTR+ S+ T S + F +++ +C+GCKA++ +
Sbjct: 953 SKPLLRIFTPILGEKADSILLKGDHTRTKSVLTSSTGALAAFIRKKETCLGCKAVVEDDR 1012
Query: 938 -LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC HC R +E+YC +++ +LE F +LWT+CQ CQGSLH++V+CTSRDCPIFY RK
Sbjct: 1013 PLCKHCVPRLSEIYCAELTKFSDLEEDFAQLWTECQRCQGSLHEEVICTSRDCPIFYMRK 1072
Query: 997 KAQKDMAEAKLQLDRW 1012
K + ++ + + R+
Sbjct: 1073 KVRIELGKRSTVMQRF 1088
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 219/337 (64%), Gaps = 11/337 (3%)
Query: 73 AKWARP--PLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGH 130
+W+RP P+ + S++FQQ+D+D+ G + G+ I+R++G+T G+
Sbjct: 69 TRWSRPSPPILD---PRKDSLVFQQIDLDHYTGSPRPGMPGAQRGTVPIMRMYGITMSGN 125
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC VHGF PYF++ P + F + L+ + R++K V + V +E+V +
Sbjct: 126 SVCCHVHGFSPYFFVHAPDNFTNNHCEGFRRALDKALLADMRSNKNEVIEAVLEVEVVHR 185
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGI--QLDGLGMKSFMTYESNVLFALR 246
+S++ Y+ FLKI VALP +A+ + +L+R I + ++ YE+N+ F +R
Sbjct: 186 QSLVGYRGDSPLKFLKITVALPRFIAAAKRLLEREIVYHEPSMSHHTYQAYETNIDFDIR 245
Query: 247 FMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
FM+D ++VG +W+E+PVGK+ R + +S CQLE D + +IS PEGE+SK+APFRI
Sbjct: 246 FMVDADLVGCSWVELPVGKWYLRGHNEHVSRCQLEVDVSWELMISHPPEGEWSKVAPFRI 305
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP HDPVIQ+A+++ QG +P IR V TL SCAPIVG V+SF
Sbjct: 306 LSFDIECAGRKGVFPEPEHDPVIQIASMMLCQGNHEPSIRTVFTLNSCAPIVGSQVISFN 365
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+E ++L W DF+REVDPD++ GYNI FD+PYLI +
Sbjct: 366 SENEMLKTWADFVREVDPDIITGYNINNFDIPYLINR 402
>gi|157103868|ref|XP_001648163.1| DNA polymerase delta catalytic subunit [Aedes aegypti]
gi|108869323|gb|EAT33548.1| AAEL014178-PA [Aedes aegypti]
Length = 984
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/618 (63%), Positives = 491/618 (79%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQN N +TRRRLA+YCLKDAYLP RLL+KLM + NY+EMARVTGVP+S
Sbjct: 365 QKEDVHHSIITDLQNENEQTRRRLAMYCLKDAYLPLRLLNKLMCVVNYMEMARVTGVPLS 424
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK+K +IP+ +GS++ YEGATV+E + G+Y PI+TLD
Sbjct: 425 CLLTRGQQIKVMSQLLRKSKVCGYLIPSYHGSGSDE-QYEGATVIEPKRGYYADPISTLD 483
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMA+NLCY+TL+ P + KL+L + + +TP+ FVKS+++KGILPEILE
Sbjct: 484 FASLYPSIMMAHNLCYTTLLQPANKEKLHLTDDQITRTPTNNVFVKSSVRKGILPEILES 543
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRAKADLK DP +++VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 544 LLAARKRAKADLKVETDPFKRSVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 603
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE ++T GYE++A VIYGDTDSVMV FGV T+E +M+LGREAA+++
Sbjct: 604 YGRTMIEQTKQEVEQRYTVENGYENDAVVIYGDTDSVMVNFGVKTLERSMELGREAAEFV 663
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F+KPIKLEFEKVYYPYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDN LV NL
Sbjct: 664 SHKFVKPIKLEFEKVYYPYLLINKKRYAGLYFTRPDKYDKMDCKGIETVRRDNSPLVANL 723
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L++R+ GAV++ K TI+DLL NR+D+S LVITK L K+ DY K AHVEL
Sbjct: 724 MNSCLQKLLIERNPEGAVEFAKQTIADLLCNRIDISQLVITKELAKS--DYAAKQAHVEL 781
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD +AP +GDRVPYVII AAK AY+++EDPIYVLEN +PID+ YYLENQ+S
Sbjct: 782 ANKMKKRDPGSAPKLGDRVPYVIINAAKNTPAYQKAEDPIYVLENCVPIDSKYYLENQLS 841
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
KPLLRIFEPIL + ++ LL GDHTR+ S+ T + F K++ +C+GCKAL+ G
Sbjct: 842 KPLLRIFEPILGDKAESILLRGDHTRTRSVVTSKVGALAAFTKKRDACLGCKALLPAGYE 901
Query: 937 --TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LCSHCK REA LY ++ LE F RLWTQCQ CQGSLH++V+CTSRDCPIFY
Sbjct: 902 GQALCSHCKPREAVLYQNELTAQCSLEDRFCRLWTQCQRCQGSLHEEVICTSRDCPIFYM 961
Query: 995 RKKAQKDMAEAKLQLDRW 1012
R K + ++ + ++ R+
Sbjct: 962 RTKIKMELDTQQKRVARF 979
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 199/289 (68%), Gaps = 7/289 (2%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VP 177
+R+FG+T EG+SVC VHGF PY Y++ P+G + F + L+ + R++K V
Sbjct: 1 MRMFGITEEGNSVCAHVHGFAPYLYVAAPRGFDRSHLCEFRKALDKSVMNDMRSNKENVQ 60
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
+ V +E+V+++SI+ Y + F+K+ VALP ++A+ + +L++ + + + Y
Sbjct: 61 EAVLDVELVERQSILGYNGEDKFTFIKVTVALPRLLAAVKRLLEKEQMMPSMDFQDCRVY 120
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYR-----KTAKTLSYCQLEFDCLYSDIISRHP 292
ESN+ F +RFM+D +VG +WIE+P G +R K + CQ+E D Y+ I+ P
Sbjct: 121 ESNIDFDIRFMVDTGVVGCSWIELPAGSWRMRQKGKIPAPETRCQIEVDVAYNVFIAHEP 180
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSC 352
EGE+SK+APFRILSFDIECAGRKG FPEP HDPVIQ+AN+V QG+++PF+RNV TL +C
Sbjct: 181 EGEWSKVAPFRILSFDIECAGRKGIFPEPQHDPVIQIANMVIRQGDQEPFLRNVFTLNTC 240
Query: 353 APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
APIVG V+S++TE+++L W F+RE+DPD++ GYNI FD+PYL+ +
Sbjct: 241 APIVGSQVLSYKTEQELLDKWASFVRELDPDILTGYNINNFDIPYLLNR 289
>gi|260826580|ref|XP_002608243.1| hypothetical protein BRAFLDRAFT_125058 [Branchiostoma floridae]
gi|229293594|gb|EEN64253.1| hypothetical protein BRAFLDRAFT_125058 [Branchiostoma floridae]
Length = 1286
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/618 (64%), Positives = 494/618 (79%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLAVYCLKDA LP RLLDKLM + NY+EMARVTGVP++
Sbjct: 667 QKEDVHHSIITDLQNGSEQTRRRLAVYCLKDALLPLRLLDKLMSVINYMEMARVTGVPLT 726
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQLLRKA++++LVIP ++ + S++ YEGATV+E G+Y+ PIATLD
Sbjct: 727 YLLTRGQQIKVMSQLLRKAREQDLVIPAMQSSVSDE-QYEGATVIEPAKGYYDTPIATLD 785
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL++ +R +L P+ KTPSG FVK L+KG+LPEILE
Sbjct: 786 FSSLYPSIMMAHNLCYTTLLSTPSSRA-SLSPDQFIKTPSGNFFVKKTLRKGLLPEILEN 844
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AKADLK+ DP K+VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVTS
Sbjct: 845 LLSARKKAKADLKKETDPFRKSVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTS 904
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MIE T++ VE+ + G++H+A+VIYGDTDSVMV+FGV TV AM+LG+EAA +
Sbjct: 905 FGRTMIEQTRQFVEETYRIALGHKHDAKVIYGDTDSVMVKFGVETVAEAMELGKEAAQAV 964
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F P+KLEFEKVY+PYLLI+KKRYAGLY+T PE DKMD KGIETVRRDNC LV +L
Sbjct: 965 SAKFPHPVKLEFEKVYFPYLLINKKRYAGLYFTRPEIHDKMDCKGIETVRRDNCPLVAHL 1024
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+ RD GA+ + K ISDLL NR+D+S LVITK LTK GD+Y K AHVEL
Sbjct: 1025 INTCLQKLLIYRDPQGAIDHAKQVISDLLCNRVDISQLVITKELTKEGDEYAAKQAHVEL 1084
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRDA +APN+GDRVPYVII AAKG AY +SEDPIYVLENNIPIDT YYL+ Q+S
Sbjct: 1085 AERMRKRDAGSAPNLGDRVPYVIIAAAKGTAAYMKSEDPIYVLENNIPIDTKYYLDQQLS 1144
Query: 880 KPLLRIFEPIL--KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-G 936
KPLLRIFEPIL A+ LL G+HT S ++ + S + F K++ +CIGCK ++ G
Sbjct: 1145 KPLLRIFEPILGESKATSVLLKGEHTLSKTVVSSKISALAGFVKKRSTCIGCKTVLQKEG 1204
Query: 937 T-LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
T +C +CK +E+E+Y K + Q+ LE F RLWTQCQ CQGSLH+DVLCTSRDCPIFY R
Sbjct: 1205 TAVCKYCKDKESEIYQKEIMQLNALEEKFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMR 1264
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK QKD+A+ + R+
Sbjct: 1265 KKVQKDLADQDKMIHRFG 1282
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 110/140 (78%), Gaps = 2/140 (1%)
Query: 762 ECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAE 821
+ L +I VD D GA+ + K ISDLL NR+D+S LVITK LTK GD+Y K AHVELAE
Sbjct: 367 KSLAQIEVDVDPQGAIDHAKQVISDLLCNRVDISQLVITKELTKEGDEYAAKQAHVELAE 426
Query: 822 RMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKP 881
RMRKRDA +APN+GDRVPYVII AAKG AY +SEDPIYVLENNIPIDT YYL+ Q+SKP
Sbjct: 427 RMRKRDAGSAPNLGDRVPYVIIAAAKGTAAYMKSEDPIYVLENNIPIDTKYYLDQQLSKP 486
Query: 882 LLRIFEPIL--KNASKELLS 899
LLRIFEPIL A+ LLS
Sbjct: 487 LLRIFEPILGESKATSVLLS 506
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 115/194 (59%), Gaps = 2/194 (1%)
Query: 90 SIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQ 149
SI FQQ+D+D+ IG + S G I+R+FGVT EG+SV C VHGF PYFY+
Sbjct: 182 SISFQQIDLDHYIGAPMDGMPGSSVGPVPIVRMFGVTMEGNSVVCHVHGFSPYFYVPAKP 241
Query: 150 GMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVV 207
+ + F L + R++K V Q V +EM++K ++ + + PFL+I V
Sbjct: 242 EFKVEHCAQFRDALNKVVLNDMRSNKDNVKQAVLAVEMMEKENMYGFHGNQRLPFLRITV 301
Query: 208 ALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
ALP ++A + +L++G G G+ + ++ESNV F +RFM+D ++G NWIE+PVGKYR
Sbjct: 302 ALPRLIAPAKRLLEQGFSCPGYGLHGYQSFESNVDFEIRFMVDTGVIGCNWIELPVGKYR 361
Query: 268 KTAKTLSYCQLEFD 281
+ S Q+E D
Sbjct: 362 LKDQLKSLAQIEVD 375
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 66/84 (78%)
Query: 318 FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFI 377
FPEP D VIQ+AN+V QGE++PFIRNV TL +CAPIVG V+SF+ E D+L W FI
Sbjct: 508 FPEPEKDSVIQIANMVVRQGEREPFIRNVFTLNTCAPIVGSKVLSFKKEADMLAEWSSFI 567
Query: 378 REVDPDVMIGYNICKFDLPYLIEK 401
REVDPD++ GYNI FDLPYLI++
Sbjct: 568 REVDPDLVTGYNIQNFDLPYLIKR 591
>gi|395858290|ref|XP_003801504.1| PREDICTED: DNA polymerase delta catalytic subunit [Otolemur
garnettii]
Length = 1108
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/618 (63%), Positives = 487/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 486 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 545
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A ++ LV+P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 546 YLLSRGQQVKVVSQLLRQAMREGLVMPVVKSEGGED--YTGATVIEPLKGYYDVPIATLD 603
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE
Sbjct: 604 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILEN 663
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 664 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 723
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 724 FGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 783
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ E D+MD KG+E VRRDNC LV N
Sbjct: 784 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRAEAHDRMDCKGLEAVRRDNCPLVAN 843
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 844 LVTASLRRLLIDRDPEGAVAHAQEVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 903
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +APN+GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 904 LAERMRKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 963
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR+ CIGC+ ++S+
Sbjct: 964 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRDCCIGCRTVLSHQ 1023
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1024 GAVCKFCRPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1083
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1084 KKVRKDLEDQEQLLRRFG 1101
Score = 332 bits (852), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 161/336 (47%), Positives = 219/336 (65%), Gaps = 9/336 (2%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDS---NRELLPLSSGSAAIIRIFGVTREG 129
++W RP L Q + ++FQQL+ID+ +G + LP S+GS ++R FGVT EG
Sbjct: 77 SRWLRPTLPPPD-PQAEPLIFQQLEIDHYVGPACPLPGRPLP-STGSVPVLRAFGVTDEG 134
Query: 130 HSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQ 187
SVCC +HGF PYFY P G GP+ +S + L G + R K V +E+
Sbjct: 135 ISVCCHIHGFAPYFYTPAPLGFGPEHLSDLQRELNGAISRDQRGGKELAGPAVVAVELCS 194
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRF 247
+ S+ Y PFL+I +ALP +VA R +L++GI++ GLG SF YE+NV F +RF
Sbjct: 195 RESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGTPSFAPYETNVDFEIRF 254
Query: 248 MIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRIL 305
M+D +IVG NW+E+P KY R+ K + CQLE D L+SD++S PEG + ++AP R+L
Sbjct: 255 MVDTDIVGCNWLELPAAKYTLRQKEKATTLCQLEADVLWSDVVSHPPEGPWQRIAPLRVL 314
Query: 306 SFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFET 365
SFDIECAGRKG FPEP DPVIQ+ +L GE++PF+R +TL+ CAPI+G V S+E
Sbjct: 315 SFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTLRPCAPILGAKVQSYEK 374
Query: 366 ERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW +FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 375 EEDLLQAWSNFIRNMDPDVITGYNIQNFDLPYLISR 410
>gi|149757884|ref|XP_001493912.1| PREDICTED: DNA polymerase delta catalytic subunit [Equus caballus]
Length = 1107
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/618 (63%), Positives = 489/618 (79%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNAVEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A ++ LV+P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMREGLVMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+TT GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIERTKQLVESKYTTENGYSASAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPNGAVAHAQEVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 962
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FA+R+ CIGC+ ++S+
Sbjct: 963 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAQRRSCCIGCRTVLSHQ 1022
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1023 GAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1082
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1083 KKVRKDLEDQEQLLRRFG 1100
Score = 325 bits (834), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 163/341 (47%), Positives = 218/341 (63%), Gaps = 22/341 (6%)
Query: 74 KWARP---PLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPL------SSGSAAIIRIFG 124
+W RP PL Q + ++FQQL+ID+ +G + PL S GS ++R FG
Sbjct: 78 RWLRPSPPPLDP----QTEPLIFQQLEIDHYVGPAQ----PLPGAPTPSPGSVPVLRAFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRH 182
VT EG SVCC +HGF PYFY P G GP+ +S + L + R K V
Sbjct: 130 VTDEGVSVCCHIHGFAPYFYTPAPPGFGPEHLSDLQRELNVAISRDQRGGKELAGPAVLA 189
Query: 183 IEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVL 242
+E+ + S+ YQ PFL+I +ALP ++A R +L++GI++ GLG SF YE+NV
Sbjct: 190 VELCSRESMFGYQGHGPSPFLRITLALPRLMAPARRLLEQGIRVAGLGTPSFAPYEANVD 249
Query: 243 FALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
F +RFM+D +IVG NW+E+P GKY R KT + CQLE D L+SD+IS PEG++ ++A
Sbjct: 250 FEIRFMVDTDIVGCNWLELPAGKYVLRPKGKT-TLCQLEADVLWSDVISHAPEGQWQRIA 308
Query: 301 PFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDV 360
P R+LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V
Sbjct: 309 PLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKV 368
Query: 361 MSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
S+E E ++L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 369 QSYEREEELLQAWSAFIRTMDPDVITGYNIQNFDLPYLISR 409
>gi|354548476|emb|CCE45212.1| hypothetical protein CPAR2_702240 [Candida parapsilosis]
Length = 1080
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/620 (63%), Positives = 485/620 (78%), Gaps = 10/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN ETRRRLAVYCLKDAYLP RLLDKLM + NY EMARVTGVP S
Sbjct: 461 QKEDVQHSIITDLQNGNKETRRRLAVYCLKDAYLPLRLLDKLMCLVNYTEMARVTGVPFS 520
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK Q+++VIPN+K GS + +EGATV+E G+Y+ PIATLD
Sbjct: 521 YLLSRGQQIKVVSQLFRKCLQEDIVIPNMKSEGSSE-EFEGATVIEPERGYYDVPIATLD 579
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + +L E KTP+G+ FV ++ +KGILP IL E
Sbjct: 580 FSSLYPSIMMAHNLCYTTLLNRNSIKAFDLKEEDYTKTPNGDYFVHADKKKGILPTILNE 639
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AK DLK KDP +K VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT+
Sbjct: 640 LLTARKKAKTDLKNEKDPFKKDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVTA 699
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK V+++++ GY ++A VIYGDTDSVMV+FG ++ MKLG EAA+Y+
Sbjct: 700 FGREMIEKTKNEVQERYSKKNGYPYDAHVIYGDTDSVMVKFGYQDLKTCMKLGEEAANYV 759
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLI+KKRYAGLYWT P+KFDKMDTKGIETVRRDNC LV+N+
Sbjct: 760 STKFQNPIKLEFEKVYFPYLLINKKRYAGLYWTRPDKFDKMDTKGIETVRRDNCRLVQNV 819
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +R++ A ++VK TI+DLL NR+DLS LVITK +K DY K AHVEL
Sbjct: 820 ITKVLEFILEERNVDKAQRFVKQTIADLLQNRVDLSQLVITKAYSK--HDYSAKQAHVEL 877
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRD +AP +GDRV YVIIK G K YE+SEDP+YVLEN++PID YYLE Q++
Sbjct: 878 AERMRKRDPGSAPTLGDRVAYVIIKTG-GDKNYEKSEDPLYVLENSLPIDVKYYLEQQMT 936
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
KPL RIF PIL ++ +KELL+G HTR+I +S P G+M+FAK+ C+ CK + ++
Sbjct: 937 KPLERIFIPILGESKTKELLAGAHTRTIKMSAPKTGGLMRFAKKSEVCVNCKTPLKSGNH 996
Query: 936 GTLCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G LC HC +G+ LY +SQ+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY
Sbjct: 997 GALCHHCIEEGKGPGLYTNALSQMNYLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFY 1056
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
RKK QKD+ + L+L +WN
Sbjct: 1057 MRKKVQKDVHQQALELVKWN 1076
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/329 (40%), Positives = 192/329 (58%), Gaps = 23/329 (6%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W+RP L + + + + FQQLD + + + R FG+T+EG+SV C
Sbjct: 78 WSRPQLPTDFDPNKEDVSFQQLDGE-----------EFNENDSTYARFFGITQEGYSVLC 126
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V GF YFY P+G D H Q +AN + V ++++ K SI Y
Sbjct: 127 SVTGFIHYFYSPVPKGFVKD--QHLMQFTS--YLKANYDG-----VVNVQIQMKESIWGY 177
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGL-GMKSFMTYESNVLFALRFMIDCN 252
PF KI V + RG ++ I+ + L ++ +TY+ N+ + LR MIDC+
Sbjct: 178 NNNIKTPFFKIYVNNNRNITRLRGAFEKAEIRFEDLFPIQQSVTYD-NINYLLRLMIDCS 236
Query: 253 IVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECA 312
I G +WI +P GKY+ + +S CQ+E Y D+I+ E E+ KMAP RILSFDIECA
Sbjct: 237 ITGMSWITLPKGKYKIKSNKISTCQIECSIDYKDLIAHQSEKEWLKMAPLRILSFDIECA 296
Query: 313 GRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLA 372
GRKG FPE HDPVIQ+AN+V+ G+ +PF+RNV T+ +CA I+G + E E ++LL
Sbjct: 297 GRKGIFPEAEHDPVIQIANVVSKLGDSKPFVRNVFTVNTCASIIGSQIYEHEKEEEMLLH 356
Query: 373 WRDFIREVDPDVMIGYNICKFDLPYLIEK 401
W++F+ EVDPDV+IGYN FD+PYL+++
Sbjct: 357 WKEFVNEVDPDVIIGYNTANFDIPYLLDR 385
>gi|149056045|gb|EDM07476.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_c
[Rattus norvegicus]
gi|149056048|gb|EDM07479.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_c
[Rattus norvegicus]
Length = 1103
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/618 (63%), Positives = 487/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 481 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 541 YLLSRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVK++++KG+LP+ILE
Sbjct: 599 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKASVRKGLLPQILEN 658
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 659 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 718
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 719 FGRQMIEKTKQLVETKYTLENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 778
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ + D+MD KG+E VRRDNC LV N
Sbjct: 779 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDRMDCKGLEAVRRDNCPLVAN 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 839 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 898
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +APN+GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 899 LAERMRKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 958
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ SCIGC+++I +
Sbjct: 959 AKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNSCIGCRSVIDHQ 1018
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1019 GAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1078
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1079 KKVRKDLEDQERLLQRFG 1096
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/334 (48%), Positives = 214/334 (64%), Gaps = 8/334 (2%)
Query: 74 KWARP-PLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGH 130
+W RP PL+ + ++FQQL+ID+ +G S E P S S I+R FGVT EG
Sbjct: 74 RWLRPTPLA--LDPSTEPLIFQQLEIDHYVGTSPPLPEGPPASRNSVPILRAFGVTDEGF 131
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC +HGF PYFY P G G + +S + L + R K V IE+ +
Sbjct: 132 SVCCHIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSGPAVLAIELCSR 191
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
S+ Y PFL+I +ALP ++A R +L++GI++ GLG SF YE+NV F +RFM
Sbjct: 192 ESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGTPSFAPYEANVDFEIRFM 251
Query: 249 IDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
+D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+LSF
Sbjct: 252 VDADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRVLSF 311
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E
Sbjct: 312 DIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEREE 371
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
D+L AW FI +DPDV+ GYNI FDLPYLI +
Sbjct: 372 DLLQAWATFILAMDPDVITGYNIQNFDLPYLISR 405
>gi|324120728|dbj|BAJ78755.1| DNA polymerase delta catalytic subunit [Blattella nipponica]
Length = 1039
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/616 (63%), Positives = 481/616 (78%), Gaps = 6/616 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN +TRRRLAVYCLKDAYLP RLLDKLM I NY+EMARVTGV +S
Sbjct: 422 QKEDVHHSIITDLQNGNPQTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVSLS 481
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKA++K ++P G ++ YEGATV+E + G+Y PIATLD
Sbjct: 482 SLLTRGQQIKVVSQLLRKAREKGYLMP-AYGGGVQEEQYEGATVIEPKKGYYSDPIATLD 540
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P L L P+ KTP+ FV +++KG+LPEILE
Sbjct: 541 FSSLYPSIMMAHNLCYTTLLNPASRDNLGLTPDKYVKTPAQNFFVNKSVRKGLLPEILEN 600
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AK DLK KDP + VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 601 LLSARKKAKTDLKNEKDPFRQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 660
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE + GY+H+A+VIYGDTDSVMV+FGV T+E AM+LGREAA+Y+
Sbjct: 661 YGRAMIEQTKQEVEQHYNMANGYQHDAQVIYGDTDSVMVKFGVQTLEEAMELGREAANYV 720
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDN LV N+
Sbjct: 721 SEKFPPPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGIETVRRDNSPLVANM 780
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL KIL+DRD GAV Y K I+DLL NR+D+S LVITK L K+ DY K AHVEL
Sbjct: 781 MNTCLQKILIDRDPTGAVDYAKQVIADLLCNRIDISQLVITKELAKS--DYAAKQAHVEL 838
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD TAP +GDRVPYVII AAK AY+++EDPIYVLEN++PID+ YYLENQ+S
Sbjct: 839 AAKMKKRDPGTAPKLGDRVPYVIISAAKNTPAYQKAEDPIYVLENSVPIDSTYYLENQLS 898
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
KPLLRIFEPIL + ++ LL GDHTR+ ++ T + F +++ +CIGCKA++S+
Sbjct: 899 KPLLRIFEPILGDKAESILLRGDHTRTKAVVTSRVGALSAFTRKKETCIGCKAVLSDSGV 958
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC HC EA+LY + + + LE F RLWT+CQ CQGSLH++VLCTSRDCPIFY RK
Sbjct: 959 PLCKHCLPNEAQLYQQELVRFNALEDRFCRLWTECQRCQGSLHEEVLCTSRDCPIFYMRK 1018
Query: 997 KAQKDMAEAKLQLDRW 1012
K Q D+A L+R+
Sbjct: 1019 KVQLDLATQDKVLNRF 1034
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/335 (45%), Positives = 219/335 (65%), Gaps = 11/335 (3%)
Query: 74 KWARP---PLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGH 130
KW+RP PL+ +++FQQLD+D+ G + GS I+R+FGVT EG+
Sbjct: 16 KWSRPAPPPLNPAK----DALIFQQLDVDHYTGSPIAGMPGSQQGSVPIMRMFGVTMEGN 71
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC VHGF PY ++S P D F L + R++K + + + IE+V +
Sbjct: 72 SVCCHVHGFSPYLFVSAPSNFTNTDCHPFKVALNKAVLADMRSNKENIREAILAIELVHR 131
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
+++ Y + + F+KI VALP ++A+C+ +L+R G F +ESN+ F +RFM
Sbjct: 132 LNLLGYAGENKKGFIKITVALPRLIAACKRLLERETIYPPAGSHQFQAFESNIDFDIRFM 191
Query: 249 IDCNIVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILS 306
+D +VG +W+E+P G++ K A + +S CQ+E D + +++S PEGE+SK+APFRILS
Sbjct: 192 VDTEVVGCSWVELPAGQWTKRAPSAFISRCQIEADVSWEELVSHAPEGEWSKVAPFRILS 251
Query: 307 FDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETE 366
FDIECAGRKG FPEP HDPVIQ+AN+V QG+ +PF+RNV TL +CAPIVG V+S+ E
Sbjct: 252 FDIECAGRKGIFPEPEHDPVIQIANMVVKQGDHEPFLRNVFTLDTCAPIVGCQVLSYARE 311
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+++L W F+REVDPD++ GYNI FD PYLI +
Sbjct: 312 QELLEKWAAFVREVDPDLITGYNINNFDFPYLINR 346
>gi|383855586|ref|XP_003703291.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Megachile
rotundata]
Length = 1091
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/619 (63%), Positives = 493/619 (79%), Gaps = 10/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++LQNGN +TRRRLAVYCLKDAYLP RLLDKLM IF Y+EMARVTGV I+
Sbjct: 472 QKEDVHHSIITELQNGNPQTRRRLAVYCLKDAYLPLRLLDKLMCIFIYMEMARVTGVSIA 531
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
LL+RGQ IKV+SQLLRK K ++ ++P + Q G EQ YEGATV+E + G+Y PIATL
Sbjct: 532 SLLTRGQQIKVVSQLLRKIKDRDYLMPGHQGQGGDEQ--YEGATVIEPKRGYYNDPIATL 589
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DF+SLYPSI+MA+NLCY+TL+ E K + P+ V +TPS F+K+N++KGILPEILE
Sbjct: 590 DFSSLYPSIIMAHNLCYTTLLNNESQHKYKIDPDNVTRTPSNSMFIKANVRKGILPEILE 649
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL ARK AKA+LK+ DPL++ VLDGRQ ALK+SANSVYGFTGA VG+LPC+EIS+SVT
Sbjct: 650 NLLTARKVAKAELKKETDPLKQKVLDGRQYALKVSANSVYGFTGAQVGKLPCLEISASVT 709
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MIE TK+ VED+F + GY+++A VIYGDTDSVMV+FGV T+E AM+LG+EAA+Y
Sbjct: 710 AYGRTMIERTKQEVEDQFCVLKGYKNDAVVIYGDTDSVMVKFGVKTIEEAMELGKEAAEY 769
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ F+KPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV N
Sbjct: 770 VTSKFLKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNCPLVAN 829
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DR+ A+ Y K ISDLL NR+D+S LV+TK LTKT DY K AHVE
Sbjct: 830 MMNTCLQKLLIDRNPNDALNYAKQIISDLLCNRIDISQLVVTKELTKT--DYTAKQAHVE 887
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA +M+KRDA TAP +GDRVPYV IKAAKG AY+++EDPIYVLENN+PIDT+YYLENQ+
Sbjct: 888 LAAKMKKRDAGTAPKLGDRVPYVFIKAAKGTPAYQKAEDPIYVLENNVPIDTNYYLENQL 947
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
SKPL+RIFEPIL + A LL GDHTR+ S++T + F +++ C+GCKA++
Sbjct: 948 SKPLVRIFEPILGEKAESLLLKGDHTRTKSVATSRVGALSAFTRKKEVCLGCKAVLVPER 1007
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
LC++C+ +EAE Y + ++LE F RLWT+CQ CQGSLHQ+V+CTSRDCPIFY
Sbjct: 1008 EKMALCAYCEPKEAEFYQTELYLGRKLEEKFCRLWTECQRCQGSLHQEVICTSRDCPIFY 1067
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
RKK Q ++ +++R+
Sbjct: 1068 MRKKVQMELDTQMKRIERF 1086
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/396 (40%), Positives = 234/396 (59%), Gaps = 35/396 (8%)
Query: 18 ESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWAR 77
+ P +A T ++D+F D F++E PE E + ++W+R
Sbjct: 24 DDLPGSFEAELATMDEMEDDFGDMSQFIEEG--PEQENTS---------------SRWSR 66
Query: 78 PPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGS----AAIIRIFGVTREGHSVC 133
PP Q +++FQQ++ID+ G LP GS I+R++G+T +G+SVC
Sbjct: 67 PP-PPDLNPQKDALIFQQIEIDHYNGAP----LPGMPGSKLAPVPIMRMYGITEQGNSVC 121
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS--KVPQFVRHIEMVQKRSI 191
C VHGF PYFY + P S F L+ + + R++ KV V +E V K+++
Sbjct: 122 CHVHGFCPYFYTTAPHNFNDAHCSRFKDALDKAVLKDMRSNPEKVQIAVLAVERVYKQNM 181
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y + FLKI VALP ++A C+ +L++ L ++ T+ESN+ F +RFM+D
Sbjct: 182 YGYTGNEKSLFLKITVALPRLIAPCKRLLEKETILPDFD-HNYRTFESNIDFDIRFMVDT 240
Query: 252 NIVGGNWIEVPVGKYR------KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRIL 305
++VG +WIE+P ++ ++ CQ+E D + I+ PEGE+SK+APFRIL
Sbjct: 241 SVVGCSWIELPPKSWKLRNHHGHNLPMITRCQIEADVAWDAFIAHSPEGEWSKIAPFRIL 300
Query: 306 SFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFET 365
SFDIECAGRKG FPEP HDPVIQ+AN+V QG+ +PF+RN+ TL +CAPIVG V+SF+
Sbjct: 301 SFDIECAGRKGIFPEPNHDPVIQIANMVIKQGDPEPFLRNIFTLDTCAPIVGSQVLSFDK 360
Query: 366 ERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E+ +L W DF+R++DPD+ GYNI FD PYLI +
Sbjct: 361 EQMLLEKWADFVRQLDPDIFTGYNINNFDFPYLINR 396
>gi|14250670|gb|AAH08800.1| Polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Homo
sapiens]
gi|123998555|gb|ABM86879.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[synthetic construct]
gi|157929094|gb|ABW03832.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[synthetic construct]
Length = 1107
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/618 (63%), Positives = 487/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A + L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMHEGLLMPVVKSEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + +TP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 962
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR+ CIGC+ ++S+
Sbjct: 963 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLSHQ 1022
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1023 GAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1082
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1083 KKVRKDLEDQEQLLRRFG 1100
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 156/333 (46%), Positives = 212/333 (63%), Gaps = 6/333 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGHS 131
+W RP Q + ++FQQL+ID+ +G + P S GS ++R FGVT EG S
Sbjct: 78 RWLRP-TPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSHGSVPVLRAFGVTDEGFS 136
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC +HGF PYFY P G GP+ + + L + +R + V +E+ +
Sbjct: 137 VCCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDSRGGRELTGPAVLAVELCSRE 196
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
S+ Y PFL+I VALP +VA R +L++GI++ GLG SF YE+NV F +RFM+
Sbjct: 197 SMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMV 256
Query: 250 DCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
D +IVG NW+E+P GKY + + + CQLE D L+SD++S PEG + ++AP R+LSFD
Sbjct: 257 DTDIVGCNWLELPAGKYALRLKEKATQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFD 316
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D
Sbjct: 317 IECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEKEED 376
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 377 LLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 409
>gi|410258776|gb|JAA17355.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Pan
troglodytes]
gi|410333287|gb|JAA35590.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Pan
troglodytes]
Length = 1107
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/618 (63%), Positives = 487/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A + L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMHEGLLMPVVKSEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + +TP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 962
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR+ CIGC+ ++S+
Sbjct: 963 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLSHQ 1022
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1023 GAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1082
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1083 KKVRKDLEDQEQLLRRFG 1100
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 212/333 (63%), Gaps = 6/333 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGHS 131
+W RP Q + ++FQQL+ID+ +G + P S GS ++R FGVT EG S
Sbjct: 78 RWLRP-TPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFS 136
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC +HGF PYFY P G GP+ + + L + NR K V +E+ +
Sbjct: 137 VCCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDNRGGKELTGPAVLAMELCSRE 196
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
S+ Y PFL+I VALP +VA R +L++GI++ GLG SF YE+NV F +RFM+
Sbjct: 197 SMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMV 256
Query: 250 DCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
D +IVG NW+E+P GKY + + + CQLE D L+SD++S PEG + ++AP R+LSFD
Sbjct: 257 DTDIVGCNWLELPAGKYTLRLKEKATQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFD 316
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D
Sbjct: 317 IECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEKEED 376
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 377 LLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 409
>gi|397485032|ref|XP_003813667.1| PREDICTED: DNA polymerase delta catalytic subunit [Pan paniscus]
Length = 1107
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/618 (63%), Positives = 487/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A + L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMHEGLLMPVVKSEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + +TP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 962
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR+ CIGC+ ++S+
Sbjct: 963 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLSHQ 1022
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1023 GAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1082
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1083 KKVRKDLEDQEQLLRRFG 1100
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 212/333 (63%), Gaps = 6/333 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGHS 131
+W RP Q + ++FQQL+ID+ +G + P S GS ++R FGVT EG S
Sbjct: 78 RWLRP-TPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFS 136
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC +HGF PYFY P G GP+ + + L + NR K V +E+ +
Sbjct: 137 VCCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDNRGGKELTGPAVLAMELCSRE 196
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
S+ Y PFL+I VALP +VA R +L++GI++ GLG SF YE+NV F +RFM+
Sbjct: 197 SMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMV 256
Query: 250 DCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
D +IVG NW+E+P GKY + + + CQLE D L+SD++S PEG + ++AP R+LSFD
Sbjct: 257 DTDIVGCNWLELPAGKYALRLKEKATQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFD 316
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D
Sbjct: 317 IECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEKEED 376
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 377 LLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 409
>gi|254587977|ref|NP_035261.3| DNA polymerase delta catalytic subunit [Mus musculus]
gi|341940458|sp|P52431.2|DPOD1_MOUSE RecName: Full=DNA polymerase delta catalytic subunit
gi|74139374|dbj|BAE40829.1| unnamed protein product [Mus musculus]
gi|74195649|dbj|BAE39632.1| unnamed protein product [Mus musculus]
gi|74223279|dbj|BAE40772.1| unnamed protein product [Mus musculus]
Length = 1105
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/618 (63%), Positives = 487/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 483 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ +KV+SQLLR+A ++ L++P VK GSE Y GATV+E G+Y+ PIATLD
Sbjct: 543 YLLTRGQQVKVVSQLLRQAMRQGLLMPVVKTEGSED--YTGATVIEPLKGYYDVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVKS+++KG+LP+ILE
Sbjct: 601 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILEN 660
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 661 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 720
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 721 FGRQMIEKTKQLVESKYTVENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 780
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ + DKMD KG+E VRRDNC LV N
Sbjct: 781 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDKMDCKGLEAVRRDNCPLVAN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 841 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 901 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 960
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ CIGC+++I +
Sbjct: 961 AKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRSVIDHQ 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1021 GAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1081 KKVRKDLEDQERLLQRFG 1098
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/337 (47%), Positives = 214/337 (63%), Gaps = 14/337 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSG------SAAIIRIFGVTR 127
+W RP L + S + ++FQQL+ID+ +G + PL G S I+R FGVT
Sbjct: 76 RWRRPTLRALDPS-TEPLIFQQLEIDHYVGSAP----PLPEGPLPSRNSVPILRAFGVTD 130
Query: 128 EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEM 185
EG SVCC + GF PYFY P G G + +S Q L + R K V IE+
Sbjct: 131 EGFSVCCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIEL 190
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFAL 245
+ S+ Y PFL+I +ALP ++A R +L++G+++ GLG SF YE+NV F +
Sbjct: 191 CSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEI 250
Query: 246 RFMIDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
RFM+D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+
Sbjct: 251 RFMVDADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRV 310
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E
Sbjct: 311 LSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYE 370
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW DFI +DPDV+ GYNI FDLPYLI +
Sbjct: 371 REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISR 407
>gi|156616275|ref|NP_002682.2| DNA polymerase delta catalytic subunit [Homo sapiens]
gi|379030588|ref|NP_001243778.1| DNA polymerase delta catalytic subunit [Homo sapiens]
gi|50403732|sp|P28340.2|DPOD1_HUMAN RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase subunit delta p125
gi|21885469|gb|AAM76971.1| polymerase (DNA directed), delta 1, catalytic subunit [Homo sapiens]
gi|119592262|gb|EAW71856.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa, isoform
CRA_a [Homo sapiens]
gi|119592263|gb|EAW71857.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa, isoform
CRA_a [Homo sapiens]
Length = 1107
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/618 (63%), Positives = 487/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A + L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMHEGLLMPVVKSEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + +TP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 962
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR+ CIGC+ ++S+
Sbjct: 963 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLSHQ 1022
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1023 GAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1082
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1083 KKVRKDLEDQEQLLRRFG 1100
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 156/333 (46%), Positives = 212/333 (63%), Gaps = 6/333 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGHS 131
+W RP Q + ++FQQL+ID+ +G + P S GS ++R FGVT EG S
Sbjct: 78 RWLRP-TPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFS 136
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC +HGF PYFY P G GP+ + + L + +R + V +E+ +
Sbjct: 137 VCCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDSRGGRELTGPAVLAVELCSRE 196
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
S+ Y PFL+I VALP +VA R +L++GI++ GLG SF YE+NV F +RFM+
Sbjct: 197 SMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMV 256
Query: 250 DCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
D +IVG NW+E+P GKY + + + CQLE D L+SD++S PEG + ++AP R+LSFD
Sbjct: 257 DTDIVGCNWLELPAGKYALRLKEKATQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFD 316
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D
Sbjct: 317 IECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEKEED 376
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 377 LLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 409
>gi|181620|gb|AAA58439.1| DNA polymerase-delta catalytic-subunit [Homo sapiens]
Length = 1107
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/618 (63%), Positives = 487/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A + L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMHEGLLMPVVKSEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + +TP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 962
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR+ CIGC+ ++S+
Sbjct: 963 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLSHQ 1022
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1023 GAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1082
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1083 KKVRKDLEDQEQLLRRFG 1100
Score = 322 bits (824), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 156/333 (46%), Positives = 212/333 (63%), Gaps = 6/333 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGHS 131
+W RP Q + ++FQQL+ID+ +G + P S GS ++R FGVT EG S
Sbjct: 78 RWLRP-TPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFS 136
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC +HGF PYFY P G GP+ + + L + +R + V +E+ +
Sbjct: 137 VCCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDSRGGRELTGPAVLAVELCSRE 196
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
S+ Y PFL+I VALP +VA R +L++GI++ GLG SF YE+NV F +RFM+
Sbjct: 197 SMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMV 256
Query: 250 DCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
D +IVG NW+E+P GKY + + + CQLE D L+SD++S PEG + ++AP R+LSFD
Sbjct: 257 DTDIVGCNWLELPAGKYALRLKEKATQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFD 316
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D
Sbjct: 317 IECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEKEED 376
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 377 LLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 409
>gi|148690782|gb|EDL22729.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_a
[Mus musculus]
Length = 1127
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/618 (63%), Positives = 486/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 505 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 564
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 565 YLLTRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 622
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVKS+++KG+LP+ILE
Sbjct: 623 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILEN 682
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 683 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 742
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 743 FGRQMIEKTKQLVESKYTVENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 802
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ + DKMD KG+E VRRDNC LV N
Sbjct: 803 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDKMDCKGLEAVRRDNCPLVAN 862
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 863 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 922
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 923 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 982
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ CIGC+++I +
Sbjct: 983 AKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRSVIDHQ 1042
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1043 GAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1102
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1103 KKVRKDLEDQERLLQRFG 1120
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/337 (47%), Positives = 214/337 (63%), Gaps = 14/337 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSG------SAAIIRIFGVTR 127
+W RP L + S + ++FQQL+ID+ +G + PL G S I+R FGVT
Sbjct: 98 RWRRPTLRALDPS-TEPLIFQQLEIDHYVGSAP----PLPEGPLPSRNSVPILRAFGVTD 152
Query: 128 EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEM 185
EG SVCC + GF PYFY P G G + +S Q L + R K V IE+
Sbjct: 153 EGFSVCCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIEL 212
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFAL 245
+ S+ Y PFL+I +ALP ++A R +L++G+++ GLG SF YE+NV F +
Sbjct: 213 CSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEI 272
Query: 246 RFMIDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
RFM+D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+
Sbjct: 273 RFMVDADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRV 332
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E
Sbjct: 333 LSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYE 392
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW DFI +DPDV+ GYNI FDLPYLI +
Sbjct: 393 REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISR 429
>gi|449301894|gb|EMC97903.1| hypothetical protein BAUCODRAFT_31911 [Baudoinia compniacensis UAMH
10762]
Length = 1107
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/621 (61%), Positives = 493/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 484 QKEDVHHTMITELYNGTPESRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 543
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLS+GQ IK LSQL RKA ++ LVIP++K GS++ YEGATV+E G+Y+ P+ATLD
Sbjct: 544 FLLSKGQQIKFLSQLYRKALEQQLVIPSLKSEGSDE-QYEGATVIEPTRGYYDVPVATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TL+ KL+L E +TP+G+ F + ++KG+L +ILE
Sbjct: 603 FASLYPSIMQAHNLCYTTLLNKTAIEKLSLKKDEDYIQTPNGDLFCTAKVRKGLLSQILE 662
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARKRAK +L D KAVL+GRQLALK+SANSVYG TGATVG+LPC+ I+SS T
Sbjct: 663 ELLSARKRAKKELAVETDTFRKAVLNGRQLALKVSANSVYGLTGATVGKLPCLAIASSTT 722
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE ++T GY H+A+VIYGDTDSVMV+FG + AM+LG++AADY
Sbjct: 723 SYGRQMIEKTKEEVEARYTIANGYTHDAQVIYGDTDSVMVKFGPSDLAKAMELGQDAADY 782
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FI+PIKLEFEKVYYPYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNC LV+
Sbjct: 783 VSKKFIRPIKLEFEKVYYPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCRLVQT 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L +L+DRD+ GA YVK+TIS+LL+ ++D+S LVITK LTK+ DY K AH E
Sbjct: 843 VIETSLRMLLMDRDVQGAQDYVKNTISELLLGKIDMSNLVITKALTKS--DYASKQAHTE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YV++K A G++ YE SEDP++VLE+N+PID YYL+NQ+
Sbjct: 901 LAERMRKRDAGSAPALGDRVAYVMVKGASGSRGYENSEDPMFVLEHNLPIDVRYYLDNQL 960
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
SKPL RIFEPIL + + LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK +++
Sbjct: 961 SKPLGRIFEPILGEKKAASLLTGEHTRSISVAAPTMGGLMKFAKKTETCLGCKKPLTSTE 1020
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G + C+ R ELY +++S+V ELEV F RLWTQCQ CQGS+H +V+C+SRDCPIF
Sbjct: 1021 ERGGAVGEECRPRFGELYQRSLSKVSELEVRFARLWTQCQRCQGSMHNEVICSSRDCPIF 1080
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A ++DR++
Sbjct: 1081 YMRMKAKKDVEDAGKEMDRFD 1101
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 132/345 (38%), Positives = 193/345 (55%), Gaps = 24/345 (6%)
Query: 63 EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRI 122
E +Q A + W RP L S + + Q + FQ ++ + G A +++
Sbjct: 82 ELKQQNAEKDQHWGRPSLGS-FDEKTQDLCFQSIEAEE----------GTLHGGRATVKL 130
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRH 182
FGVT GHSV V F Y Y++ P D F LE M + +
Sbjct: 131 FGVTETGHSVLLHVTDFLHYLYVAAPVSFTKSDCEPFKTYLETHM------GQHAAAIHS 184
Query: 183 IEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKS---FMTYE 238
++MV + ++ +Q + P+LKI V + R ++RG GL + +T++
Sbjct: 185 VQMVLRENLFGFQGNQKSPYLKITVTDHKHINKLRTTIERGDANYKGLWKAAEGGILTFD 244
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL--SYCQLEFDCLYSDIISRHPEGEF 296
N+ + LRFMID + G +W+ V GKY + S+CQ+E C Y D+I+ +GE+
Sbjct: 245 -NIQYVLRFMIDTKVSGMSWVSVDPGKYHLISPQTKHSHCQIEAYCHYRDLIAHPIDGEW 303
Query: 297 SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
KMAP R+LSFDIECAGRKG FPE DPVIQ+AN+VT GE++PF+RNV + +C+ IV
Sbjct: 304 QKMAPLRVLSFDIECAGRKGVFPEANIDPVIQIANVVTRYGEEKPFVRNVFCMDTCSLIV 363
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ F +E +L+AWRDF++EVDPDV+IGYNIC FD PYL+++
Sbjct: 364 NTQIFEFGSEEKMLMAWRDFVQEVDPDVIIGYNICNFDFPYLLDR 408
>gi|14318657|gb|AAH09128.1| Polymerase (DNA directed), delta 1, catalytic subunit [Mus musculus]
gi|30962877|gb|AAH52670.1| Polymerase (DNA directed), delta 1, catalytic subunit [Mus musculus]
Length = 1105
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/618 (63%), Positives = 486/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 483 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 543 YLLTRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVKS+++KG+LP+ILE
Sbjct: 601 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILEN 660
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 661 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 720
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 721 FGRQMIEKTKQLVESKYTVENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 780
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ + DKMD KG+E VRRDNC LV N
Sbjct: 781 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDKMDCKGLEAVRRDNCPLVAN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 841 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 901 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 960
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ CIGC+++I +
Sbjct: 961 AKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRSVIDHQ 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1021 GAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1081 KKVRKDLEDQERLLQRFG 1098
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 212/333 (63%), Gaps = 6/333 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPL--SSGSAAIIRIFGVTREGHS 131
+W RP L + S + ++FQQL+ID+ +G + S S I+R FGVT EG S
Sbjct: 76 RWRRPTLRALDPS-TEPLIFQQLEIDHYVGSAPPLPEGPPPSRNSVPILRAFGVTDEGFS 134
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC + GF PYFY P G G + +S Q L + R K V IE+ +
Sbjct: 135 VCCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRE 194
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
S+ Y PFL+I +ALP ++A R +L++G+++ GLG SF YE+NV F +RFM+
Sbjct: 195 SMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEIRFMV 254
Query: 250 DCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+LSFD
Sbjct: 255 DADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRVLSFD 314
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D
Sbjct: 315 IECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEREED 374
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW DFI +DPDV+ GYNI FDLPYLI +
Sbjct: 375 LLQAWADFILAMDPDVITGYNIQNFDLPYLISR 407
>gi|150866455|ref|XP_001386065.2| DNA polymerase delta catalytic subunit (DNA polymerase III)
[Scheffersomyces stipitis CBS 6054]
gi|149387711|gb|ABN68036.2| DNA polymerase delta catalytic subunit (DNA polymerase III)
[Scheffersomyces stipitis CBS 6054]
Length = 1070
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/619 (62%), Positives = 487/619 (78%), Gaps = 9/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNG +ETRRRLAVYCLKDAYLP RLLDKLM + NY EMARVTGVP S
Sbjct: 450 QKEDVQHSIITDLQNGTSETRRRLAVYCLKDAYLPLRLLDKLMCLVNYTEMARVTGVPFS 509
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK ++++VIPN+K G+ + YEGATV+E G+Y+ PIATLD
Sbjct: 510 YLLARGQQIKVISQLFRKCLEEDIVIPNMKSEGTNE-EYEGATVIEPSRGYYDVPIATLD 568
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + + NL + +TP+G+ FVK + ++GILP IL E
Sbjct: 569 FSSLYPSIMMAHNLCYTTLLNIQTIKAFNLTEDDYTRTPNGDYFVKDHKKQGILPTILNE 628
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLK+ DP ++ VL+GRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT+
Sbjct: 629 LLTARKKAKADLKKETDPFKRDVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSVTA 688
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK V++ ++ GY ++A+VIYGDTDSVMV+FG +E MKLG EAA+Y+
Sbjct: 689 FGREMIEKTKNEVQEFYSKKNGYPYDAQVIYGDTDSVMVKFGYQDLETCMKLGEEAANYV 748
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F KPIKLEFEKVY+PYLLI+KKRYAGLYWT P+KFDKMDTKGIETVRRDNC LV+N+
Sbjct: 749 STKFKKPIKLEFEKVYFPYLLINKKRYAGLYWTRPDKFDKMDTKGIETVRRDNCRLVQNV 808
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL DRD+ A ++VK TI+DLL NR+DLS LVITK K DY K AHVEL
Sbjct: 809 ITKVLEFILEDRDVEKAQRFVKQTIADLLQNRVDLSQLVITKAYAK--HDYAAKQAHVEL 866
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERM+KRDA +AP +GDRV YVIIK + K YE+SEDP+YVLEN++PID YYL+NQ++
Sbjct: 867 AERMKKRDAGSAPTLGDRVAYVIIKGSGSDKNYEKSEDPLYVLENSLPIDVKYYLDNQLT 926
Query: 880 KPLLRIFEPILKNA-SKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
KPL RIF PIL +A +KELL+G HTR+I +S P +M+FAK+ C+ CK + ++
Sbjct: 927 KPLERIFNPILGDAKTKELLAGSHTRTIKMSAPKTGALMRFAKKSEVCVNCKTPLRSDNH 986
Query: 936 GTLCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G LC +C +G+ LY +SQ+ LE F RLWT+CQ CQGSLHQ+VLC++ DCPIFY
Sbjct: 987 GALCPNCIREGKGPTLYGNALSQMNYLENKFSRLWTECQRCQGSLHQEVLCSNNDCPIFY 1046
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
RKKAQKD+ + ++L +W
Sbjct: 1047 MRKKAQKDVHQQSMELVKW 1065
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 201/370 (54%), Gaps = 37/370 (10%)
Query: 60 RDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDID-YVIGDSNRELLPLSSGSAA 118
++IE +D KW RPPL + + FQQLD + + IGD
Sbjct: 56 KEIEHEED-----QKWGRPPLPETFDPTIDDVSFQQLDAEEFQIGD------------YT 98
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDD-ISHFHQILEGRMREANRNSKVP 177
I R FG+T EGHSV C V GF YFY+ P+G D + F L
Sbjct: 99 IARYFGITEEGHSVLCNVTGFVHYFYVPVPKGFYKDQHLDQFSSYLRANY---------- 148
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMT 236
+ V +IE+ K SI Y + PF K + + R +RG I+ + L ++
Sbjct: 149 EGVENIELALKESIWGYNKSVKTPFFKFFINNTKNITKLRSAFERGEIRFENLFPPQNVS 208
Query: 237 YESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEG 294
Y+ N+ + LR MIDC + G +W+ +P GK+ + +S CQ+E Y D+IS EG
Sbjct: 209 YD-NINYLLRLMIDCKVTGMSWVTLPKGKFSLVHSNDKVSTCQIECSINYKDLISHPSEG 267
Query: 295 EFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP 354
E+ KMAP RILSFDIECAGRKG FPE HDPVIQ+AN+V+ GE +PF+RNV T+ +C+P
Sbjct: 268 EWLKMAPLRILSFDIECAGRKGIFPEAEHDPVIQIANVVSKHGESRPFVRNVFTVNTCSP 327
Query: 355 IVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV----HHSIIS 410
I+G + E E D+L+ W+DF+ VD DV+IGYN FD+PYL+++ + S
Sbjct: 328 IIGSQIFEHEKEEDMLMNWKDFVVSVDADVIIGYNTANFDIPYLLDRAKALGLRNFPFFS 387
Query: 411 DLQNGNAETR 420
L+N E +
Sbjct: 388 RLKNSKQEAK 397
>gi|407927598|gb|EKG20487.1| DNA-directed DNA polymerase family B pol2 [Macrophomina phaseolina
MS6]
Length = 1097
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/621 (61%), Positives = 487/621 (78%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG++ +RRRLAVYCLKDAYLP RLLDKLM + NY EMARVTGVP S
Sbjct: 474 QKEDVHHTMITELFNGDSNSRRRLAVYCLKDAYLPMRLLDKLMCLVNYTEMARVTGVPFS 533
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K LSQL RKA ++ LVIPN++ SE YEGATV+E G+Y+ PIATLD
Sbjct: 534 FLLSRGQQVKFLSQLYRKALEQQLVIPNLRSESSED-QYEGATVIEPTRGYYDVPIATLD 592
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPS++ A+NLCY+TL+ KL L E TP+G+ F + ++KG+L +I E
Sbjct: 593 FASLYPSVIQAHNLCYTTLLNKNSVEKLGLKKDEDYIVTPNGDLFCTTKVRKGLLTQIFE 652
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARK+AK ++ +DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+ I+SS T
Sbjct: 653 ELLGARKQAKKEMGLEQDPFKKAVLNGRQLALKISANSVYGLTGATNGKLPCLAIASSTT 712
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK++VE +T GY H+A+VIYGDTDSVMV+FGV ++ M+LG EAA +
Sbjct: 713 SYGRQMIEKTKEVVEKHYTIANGYSHDAQVIYGDTDSVMVKFGVKELDKTMELGEEAAKF 772
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F KPIKLEFEKVY+PYLLI+KKRYAGLYWTNP K+DKMDTKGIETVRRDNC LV+
Sbjct: 773 VSSHFTKPIKLEFEKVYFPYLLINKKRYAGLYWTNPNKWDKMDTKGIETVRRDNCRLVQT 832
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L +L+DRD+ GA +VK TISDLL N++D+S LVITK L K+ DY K AHVE
Sbjct: 833 VIETSLRMLLIDRDVNGAQDFVKETISDLLQNKIDMSNLVITKALAKS--DYAAKQAHVE 890
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRDA +AP +GDRV YVI+K A +K YE+SEDPIYVLENN+PIDT YYL+NQ+
Sbjct: 891 LAERMKKRDAGSAPALGDRVAYVIVKGANDSKNYEKSEDPIYVLENNLPIDTKYYLDNQL 950
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK-----AL 932
+KPL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK A
Sbjct: 951 AKPLGRIFEPILGEKKAAQLLTGEHTRSISVAAPTMGGLMKFAKKTATCMGCKKPMTSAA 1010
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+G +C +C+ R ELY KT+S+V +LEV F RLWTQCQ CQGS+H +V+C+SRDCPIF
Sbjct: 1011 ERDGAVCENCRPRFGELYQKTLSKVSDLEVRFARLWTQCQRCQGSMHNEVICSSRDCPIF 1070
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ + +L R++
Sbjct: 1071 YMRMKAKKDVEDVGKELVRFD 1091
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/403 (35%), Positives = 209/403 (51%), Gaps = 31/403 (7%)
Query: 7 SARKRPPPTPKESWPNKQQATTPTTPVIDDEFLDED--VFLDETLLPEDEESLILRDIEQ 64
SAR+ +P+ + + PT D +E L E LR +
Sbjct: 19 SARRNIAASPQSAKKRRLNGAPPTPSAKGDHVGSSQPRSQFEEELEKLGENMHGLRSVNA 78
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
+D +WARPPL + + FQQ+D + G A +++FG
Sbjct: 79 EKD-----QQWARPPLDD-FDPASNDLCFQQIDAEE----------GTLHGGKATVKLFG 122
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT GHSV V GF Y Y++ P D F LE ++ + + ++
Sbjct: 123 VTDNGHSVLLHVTGFMHYLYVAAPMAFTQADCQPFKAYLETQIAQHQ------PAIHSVQ 176
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGL---GMKSFMTYESN 240
M + +I +Q + P+LKI V P + R ++ G GL S +T++ N
Sbjct: 177 MTMRENIYGFQGNQKSPYLKIAVTDPKFINRLRTTIESGNANYKGLWKSAEGSILTFD-N 235
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
+ + LRFM+DC I G +W+E GKY + S CQ+E Y D+I+ +GE++K
Sbjct: 236 LQYVLRFMVDCKIAGMSWVEAKAGKYHMIQHRDRHSTCQIEAHVHYRDLIAHQADGEWAK 295
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGV 358
MAP RILSFDIECAGRKG FPEP DPVIQ+AN+V++ G ++PFIRNV L +C+ I
Sbjct: 296 MAPLRILSFDIECAGRKGIFPEPNIDPVIQIANVVSIAGVEKPFIRNVFCLDTCSLITNA 355
Query: 359 DVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V+ F+TE +L+ WRDF+ E DPDV+IGYNI FD PYL+++
Sbjct: 356 QVLEFDTEEKMLMKWRDFLEEADPDVIIGYNIANFDFPYLLDR 398
>gi|11067381|ref|NP_067694.1| DNA polymerase delta catalytic subunit [Rattus norvegicus]
gi|3913500|sp|O54747.1|DPOD1_RAT RecName: Full=DNA polymerase delta catalytic subunit
gi|2687728|emb|CAA10946.1| DNA polymerase delta, catalytic subunit [Rattus norvegicus]
Length = 1103
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/618 (63%), Positives = 486/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 481 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 541 YLLSRGQQVKVVSQLLRQAMREGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVK++++KG+LP+ILE
Sbjct: 599 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKASVRKGLLPQILEN 658
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+S NSVYGFTGA VG+LPC+EIS SVT
Sbjct: 659 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSPNSVYGFTGAQVGKLPCLEISQSVTG 718
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 719 FGRQMIEKTKQLVETKYTLENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 778
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ + D+MD KG+E VRRDNC LV N
Sbjct: 779 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDRMDCKGLEAVRRDNCPLVAN 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 839 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 898
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +APN+GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 899 LAERMRKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 958
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ SCIGC+++I +
Sbjct: 959 AKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNSCIGCRSVIDHQ 1018
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1019 GAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1078
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1079 KKVRKDLEDQERLLQRFG 1096
Score = 326 bits (835), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 161/334 (48%), Positives = 214/334 (64%), Gaps = 8/334 (2%)
Query: 74 KWARP-PLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGH 130
+W RP PL+ + ++FQQL+ID+ +G S E P S S I+R FGVT EG
Sbjct: 74 RWLRPTPLA--LDPSTEPLIFQQLEIDHYVGTSPPLPEGPPASRNSVPILRAFGVTDEGF 131
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC +HGF PYFY P G G + +S + L + R K V IE+ +
Sbjct: 132 SVCCHIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSGPAVLAIELCSR 191
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
S+ Y PFL+I +ALP ++A R +L++GI++ GLG SF YE+NV F +RFM
Sbjct: 192 ESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGTPSFAPYEANVDFEIRFM 251
Query: 249 IDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
+D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+LSF
Sbjct: 252 VDADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRVLSF 311
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E
Sbjct: 312 DIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEREE 371
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
D+L AW FI +DPDV+ GYNI FDLPYLI +
Sbjct: 372 DLLQAWATFILAMDPDVITGYNIQNFDLPYLISR 405
>gi|402906428|ref|XP_003916004.1| PREDICTED: DNA polymerase delta catalytic subunit [Papio anubis]
Length = 1107
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/618 (63%), Positives = 487/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A + L++P V+ G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMHEGLLMPVVRSEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDTHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 962
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR+ CIGC+ ++++
Sbjct: 963 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLNHQ 1022
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1023 GAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1082
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1083 KKVRKDLEDQEQLLRRFG 1100
Score = 326 bits (835), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 215/336 (63%), Gaps = 12/336 (3%)
Query: 74 KWARP---PLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTRE 128
+W RP PL Q + ++FQQL+ID+ +G + PLS GS ++R FGVT E
Sbjct: 78 RWHRPTPPPLDP----QTEPLIFQQLEIDHYVGPAQPVPGGPPLSRGSVPVLRAFGVTDE 133
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMV 186
G SVCC +HGF PYFY P G P+ + + L + NR K V +E+
Sbjct: 134 GVSVCCHIHGFAPYFYTPAPPGFKPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELC 193
Query: 187 QKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALR 246
+ S+ Y PFL+I +ALP +VA R +L++GI++ GLG SF YE+NV F +R
Sbjct: 194 SRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIR 253
Query: 247 FMIDCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRIL 305
FM+D +IVG NW+E+P GKY + K + CQLE D L+SD++S PEG + ++AP R+L
Sbjct: 254 FMVDTDIVGCNWLELPAGKYTLRLKKKTTQCQLEADVLWSDVVSHPPEGPWQRIAPLRVL 313
Query: 306 SFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFET 365
SFDIECAGRKG FPEP DPVIQ+ +L GE++PF+R +TL+ CAPI+G V S+E
Sbjct: 314 SFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTLRPCAPILGAKVQSYEK 373
Query: 366 ERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 374 EEDLLQAWSTFIRVMDPDVITGYNIQNFDLPYLISR 409
>gi|148690786|gb|EDL22733.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_e
[Mus musculus]
Length = 1105
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/618 (63%), Positives = 486/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 483 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 543 YLLTRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVKS+++KG+LP+ILE
Sbjct: 601 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILEN 660
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 661 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 720
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 721 FGRQMIEKTKQLVESKYTVENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 780
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ + DKMD KG+E VRRDNC LV N
Sbjct: 781 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDKMDCKGLEAVRRDNCPLVAN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 841 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 901 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 960
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ CIGC+++I +
Sbjct: 961 AKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRSVIDHQ 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1021 GAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1081 KKVRKDLEDQERLLQRFG 1098
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/337 (47%), Positives = 214/337 (63%), Gaps = 14/337 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSG------SAAIIRIFGVTR 127
+W RP L + S + ++FQQL+ID+ +G + PL G S I+R FGVT
Sbjct: 76 RWRRPTLRALDPS-TEPLIFQQLEIDHYVGSAP----PLPEGPLPSRNSVPILRAFGVTD 130
Query: 128 EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEM 185
EG SVCC + GF PYFY P G G + +S Q L + R K V IE+
Sbjct: 131 EGFSVCCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIEL 190
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFAL 245
+ S+ Y PFL+I +ALP ++A R +L++G+++ GLG SF YE+NV F +
Sbjct: 191 CSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEI 250
Query: 246 RFMIDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
RFM+D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+
Sbjct: 251 RFMVDADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRV 310
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E
Sbjct: 311 LSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYE 370
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW DFI +DPDV+ GYNI FDLPYLI +
Sbjct: 371 REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISR 407
>gi|443690888|gb|ELT92898.1| hypothetical protein CAPTEDRAFT_165849 [Capitella teleta]
Length = 1052
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/620 (64%), Positives = 472/620 (76%), Gaps = 9/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNG+ +TRRRLAVYCLKDAYLP RLLDKLM I NY+EMARVTGV +
Sbjct: 432 QKEDVHHSIISDLQNGSDQTRRRLAVYCLKDAYLPLRLLDKLMSIINYIEMARVTGVSLG 491
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
LLSRGQ IKV+SQLLRKAK ++LVIP K + G E + GATV+E G+Y+ P+ATL
Sbjct: 492 ILLSRGQQIKVMSQLLRKAKTQDLVIPVYKVETGDE---FTGATVIEPVRGYYDTPVATL 548
Query: 519 DFASLYPSIMMAYNLCYSTLVT-PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
DFASLYPSIMMA+NLCY+TL+T P K L + KTP+ FVKS ++KG+LPEIL
Sbjct: 549 DFASLYPSIMMAHNLCYTTLITTPSSIEKEGLSSDQYIKTPANSLFVKSTVRKGLLPEIL 608
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
E LL+ARK+AK +LK DP K VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SV
Sbjct: 609 ESLLSARKKAKTELKSETDPFRKKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSV 668
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
T++GR MIE TK+ VE+ +T GY+H+A V+YGDTDSVM +FGV TV AM+LG+EAA
Sbjct: 669 TAFGRLMIEQTKQFVEETYTVKNGYKHDAMVVYGDTDSVMCRFGVSTVAEAMELGQEAAL 728
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
I+ TF+ PIKLEFEKVY+PYLLI+KKRYAGLY+T + DKMD KGIETVRRDNC LV
Sbjct: 729 EITKTFVSPIKLEFEKVYFPYLLINKKRYAGLYFTKADVHDKMDCKGIETVRRDNCQLVA 788
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
NL+ CL KIL++RD GAV Y K TISDLL NR+D+S LVITK L KT D+Y K AHV
Sbjct: 789 NLINTCLQKILINRDPMGAVDYAKQTISDLLCNRIDISQLVITKELAKTEDEYAAKQAHV 848
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA RMRKRDA +AP +GDRVPYVII A K AY +SEDPIYVLENNIPID YYLENQ
Sbjct: 849 ELAHRMRKRDAGSAPQLGDRVPYVIIAAPKKTAAYLKSEDPIYVLENNIPIDVQYYLENQ 908
Query: 878 ISKPLLRIFEPIL--KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN 935
++KPLLRIFEPIL K A LL G+HT + ++ T G+ F K++ +CIGCK +
Sbjct: 909 LAKPLLRIFEPILGEKKAESVLLRGEHTLTRTVVTSKIGGLSAFTKKRETCIGCKTPLDK 968
Query: 936 G--TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
+C HC E+ LY K + ++ LE F RLWTQCQ C GSLH+D+LCTSRDCPIFY
Sbjct: 969 AGVAVCKHCAASESALYQKEICELSALETKFSRLWTQCQRCTGSLHEDILCTSRDCPIFY 1028
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
RKK QKD+ + + R+
Sbjct: 1029 MRKKVQKDLGHQEKVIQRFG 1048
Score = 315 bits (808), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 212/332 (63%), Gaps = 5/332 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW+RP L + +S++FQQLD+D+ IGD + SG I+R+FG+T GHSV
Sbjct: 26 KWSRP-LVTPLDPLKESLVFQQLDLDFYIGDPMSGMPGSKSGKVPIVRMFGITASGHSVV 84
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
+HG+ PYFY+ P+ F L + + R++K V V ++ V K SI
Sbjct: 85 THIHGYLPYFYVLAISNFKPEHCGKFRDALNKVVIKDMRSNKDNVSDAVLAVDYVMKESI 144
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y P+LKI +ALP ++A + +L++G Q + ++ YESN+ F +RFM+D
Sbjct: 145 YGYHGNTKSPYLKITMALPKLIAPAKRLLEQGFQFSEYPIHNYAGYESNIDFEIRFMVDT 204
Query: 252 NIVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
++VG NWI +P G+YR + + CQ+E D + +S PEG++ K+AP LSFDI
Sbjct: 205 DVVGCNWIVLPAGQYRVRPRNNMKTRCQIESDVAWDQFVSHGPEGDWLKLAPMLTLSFDI 264
Query: 310 ECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
ECAGRKG FPEP DPVIQ+AN+V QGEK+PFIRNV TLK+CAPIVG V+SFE+E ++
Sbjct: 265 ECAGRKGIFPEPDKDPVIQIANMVIRQGEKEPFIRNVFTLKACAPIVGAQVLSFESEAEL 324
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
L W +FIREVDPDV+ GYNI FDLPYL+ +
Sbjct: 325 LKKWAEFIREVDPDVITGYNIQNFDLPYLLNR 356
>gi|452845568|gb|EME47501.1| hypothetical protein DOTSEDRAFT_50888 [Dothistroma septosporum NZE10]
Length = 1104
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/621 (61%), Positives = 494/621 (79%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 481 QKEDVHHTMITELYNGTPESRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLS+GQ IK +SQL RKA ++ LV+P++K GS++ YEGATV+E G+Y+ P+ATLD
Sbjct: 541 FLLSKGQQIKFISQLFRKALEQQLVVPDLKSEGSDE-QYEGATVIEPTRGYYDVPVATLD 599
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ K+ L + TP+G+ F + ++KG+L +ILE
Sbjct: 600 FASLYPSIIQAHNLCYTTLLNKNAVEKMQLKKDDDYIVTPNGDLFATTKVRKGLLSQILE 659
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS T
Sbjct: 660 ELLGARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLAIASSTT 719
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK+ VE K+T GY H+A+VIYGDTDSVMV+FG + AM+LG+EAA Y
Sbjct: 720 AYGRQMIEKTKEEVEGKYTVANGYSHDAQVIYGDTDSVMVKFGPNDLAKAMELGQEAAGY 779
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT P+ +DKMDTKGIETVRRDNC LV+N
Sbjct: 780 VSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTKPDNYDKMDTKGIETVRRDNCRLVQN 839
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L +L+D+D+ GA YVK TIS+LL NR+D+S LVITK LTK+ DY K AH E
Sbjct: 840 VIETSLKMLLIDQDVQGAQDYVKETISELLQNRVDMSNLVITKALTKS--DYANKQAHTE 897
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YV++K A G+K YE+SEDP++VLE+N+PIDT YYL+NQ+
Sbjct: 898 LAERMRKRDAGSAPALGDRVAYVMVKGAAGSKGYEKSEDPMFVLEHNLPIDTKYYLDNQL 957
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+KPL RIFEPIL + + +LL+G+HTR+IS++ P+ G+MKFAK+ +C+GCK +++
Sbjct: 958 AKPLGRIFEPILGEKKAGQLLTGEHTRAISVAAPTMGGLMKFAKKTETCLGCKKPLASKE 1017
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G + C+ R AELY +++S+V ELEV F RLWTQCQ CQGS+H +V+C+SRDCPIF
Sbjct: 1018 EQGGAVGEECRPRFAELYQRSLSKVAELEVRFNRLWTQCQRCQGSMHNEVICSSRDCPIF 1077
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A +++R++
Sbjct: 1078 YMRMKAKKDVEDAGKEIERFD 1098
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 190/343 (55%), Gaps = 24/343 (6%)
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
+++ A + +W+RP L G+ + ++ FQ +D + G A +++FG
Sbjct: 81 KENNAEKDQQWSRPSLD-GFNERTDTVSFQAIDAEE----------GTLHGGKATVKLFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT GHSV V F Y Y++ P +D + LE M + + ++ ++
Sbjct: 130 VTEAGHSVLLHVTDFLHYLYVAAPISFTKNDCEPYKLFLESSMAQHS------AAIQSVQ 183
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGL---GMKSFMTYESN 240
MV + ++ +Q + P+LKI V P + R + G GL +T++ N
Sbjct: 184 MVLRENLFGFQGNQKSPYLKITVTDPKFINKLRTTIQSGNANYKGLWKVAEGGILTFD-N 242
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFSK 298
+ + LRFMID + G +W+ GKY S CQ+E C Y DII+ +GE+ K
Sbjct: 243 IQYVLRFMIDTGVAGMSWVSTHGGKYHMIPDRDRQSTCQIEAHCHYRDIIAHPVDGEWQK 302
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGV 358
MAP R+LSFDIECAGRKG FPE DPVIQ+AN+VT GE++PF+RNV + +C+ IV
Sbjct: 303 MAPLRVLSFDIECAGRKGVFPEANVDPVIQIANVVTRYGEEKPFVRNVFCMDTCSLIVNT 362
Query: 359 DVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ F E +L+AWRDF+ EVDPDV+IGYNI FD PYL+++
Sbjct: 363 QIFEFGAEEKMLMAWRDFVEEVDPDVIIGYNISNFDFPYLLDR 405
>gi|26353290|dbj|BAC40275.1| unnamed protein product [Mus musculus]
Length = 1105
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/618 (63%), Positives = 486/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 483 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 543 YLLTRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVKS+++KG+LP+ILE
Sbjct: 601 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILEN 660
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 661 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 720
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 721 FGRQMIEKTKQLVESKYTVENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 780
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ + DKMD KG+E VRRDNC LV N
Sbjct: 781 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDKMDCKGLEAVRRDNCPLVAN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +IL+DRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 841 LVTSSLRRILMDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 901 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 960
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ CIGC+++I +
Sbjct: 961 AKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRSVIDHQ 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1021 GAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1081 KKVRKDLEDQERLLQRFG 1098
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 212/333 (63%), Gaps = 6/333 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPL--SSGSAAIIRIFGVTREGHS 131
+W RP L + S + ++FQQL+ID+ +G + S S I+R FGVT EG S
Sbjct: 76 RWRRPTLRALDPS-TEPLIFQQLEIDHYVGSAPPLPEGPPPSRNSVPILRAFGVTDEGFS 134
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC + GF PYFY P G G + +S Q L + R K V IE+ +
Sbjct: 135 VCCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRE 194
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
S+ Y PFL+I +ALP ++A R +L++G+++ GLG SF YE+NV F +RFM+
Sbjct: 195 SMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEIRFMV 254
Query: 250 DCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+LSFD
Sbjct: 255 DADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRVLSFD 314
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D
Sbjct: 315 IECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEREED 374
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW DFI +DPDV+ GYNI FDLPYLI +
Sbjct: 375 LLQAWADFILAMDPDVITGYNIQNFDLPYLISR 407
>gi|324120706|dbj|BAJ78744.1| DNA polymerase delta catalytic subunit [Aposthonia japonica]
Length = 1088
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/615 (64%), Positives = 481/615 (78%), Gaps = 7/615 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH+II+DLQNGN++TRRRLAVYCLKDAYLP RLLDKLM I NY+EMARVTGV +S
Sbjct: 474 QKEDVHHNIITDLQNGNSQTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVSLS 533
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKA+ K ++P G ++ YEGATV+E G+Y PI TLD
Sbjct: 534 CLLTRGQQIKVVSQLLRKARDKGYLMPTYS-GGVQEEQYEGATVIEPLKGYYADPITTLD 592
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + K L PE KTPS FVK +++KG+LPEILE
Sbjct: 593 FSSLYPSIMMAHNLCYTTLL--QGGTKDKLSPEDYVKTPSQNFFVKESVRKGLLPEILES 650
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AK DLK DP +K VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 651 LLSARKKAKNDLKNETDPFKKNVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 710
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK++VE K+ T GY+HNA VIYGDTDSVMV+FGV T+ AM+LGR+AA+Y+
Sbjct: 711 YGRTMIEQTKQVVEQKYNTENGYKHNAVVIYGDTDSVMVKFGVETLAEAMELGRDAAEYV 770
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ F+KPIKLEFEKVY+PYLLI+KKRYAGLY+T PE+ DKMD KGIETVRRDN LV N+
Sbjct: 771 TSKFVKPIKLEFEKVYFPYLLINKKRYAGLYFTRPEQHDKMDCKGIETVRRDNAPLVANM 830
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DRD GAV+Y K ISDLL NR+D+S LVITK LTKT DY K AHVEL
Sbjct: 831 MNTCLQKLLIDRDPNGAVEYAKQIISDLLCNRIDISQLVITKELTKT--DYAAKQAHVEL 888
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M++RDA TAP +GDRVPYVII AAK AY ++EDPIYVLEN+IPID++YYLENQ+S
Sbjct: 889 ANKMKQRDAGTAPKLGDRVPYVIISAAKNTPAYMKAEDPIYVLENSIPIDSNYYLENQLS 948
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT- 937
KPLLRIF PIL + A LL GDHTR+ S+ T + F +R+ +C+GCKA++ + +
Sbjct: 949 KPLLRIFSPILGEKAESILLRGDHTRTKSMVTSRVGALAAFTRRKETCLGCKAVLPDSSA 1008
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LC HC E+ LY + ++ +LE F RLWT+CQ CQGSLH++VLCTSRDCPIFY RKK
Sbjct: 1009 LCKHCISNESLLYQSELLKLSDLENKFCRLWTECQRCQGSLHEEVLCTSRDCPIFYMRKK 1068
Query: 998 AQKDMAEAKLQLDRW 1012
Q D+ L R+
Sbjct: 1069 VQMDLISQDKVLQRF 1083
Score = 311 bits (796), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 222/340 (65%), Gaps = 19/340 (5%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
AKW RP L + S +++FQQ+DID+ G + + G I+R++G+T EG+SV
Sbjct: 67 AKWCRPSLPTLNPS-VDTLIFQQIDIDHYTGRPMQGMPGAQVGPVPIMRMYGITMEGNSV 125
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFH---------QILEGRMREANRNSKVPQFVRHI 183
C +HGF PYF++ + PDD ++ H + + MR +NR+ V + V +
Sbjct: 126 CAHIHGFSPYFHV-----LAPDDFTNSHCQPFKDALNRSILADMR-SNRDG-VQEAVLAV 178
Query: 184 EMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLF 243
E+V+K++I Y+ FLKI V LPT++A + +L++ + L +F +E+N+ F
Sbjct: 179 ELVKKQNIFGYRGDALSNFLKITVTLPTLIAPGKRLLEKEVMLPAFSSHTFQAFETNIDF 238
Query: 244 ALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAP 301
+RFM+D IVG +W+E+P + R+ A+ S CQLE + + +I+ PEGE+SK+AP
Sbjct: 239 DIRFMVDTQIVGCSWVELPSRMWTIREKAQHQSRCQLEVNIAWDRLITHAPEGEWSKVAP 298
Query: 302 FRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVM 361
FRILSFDIECAGRKG FPEP DPVIQ+AN+V QG+ +PFIRNV TL +CAPIVG V+
Sbjct: 299 FRILSFDIECAGRKGIFPEPNQDPVIQIANMVVKQGDHEPFIRNVFTLDTCAPIVGCQVL 358
Query: 362 SFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
S+++E ++L W DFIRE+DPD+ GYNI FD PYLI++
Sbjct: 359 SYQSETEMLEKWADFIRELDPDIFTGYNINNFDFPYLIQR 398
>gi|400602303|gb|EJP69905.1| DNA polymerase family B [Beauveria bassiana ARSEF 2860]
Length = 1106
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/622 (62%), Positives = 488/622 (78%), Gaps = 11/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 481 QKEDVHHTMITELFNGTPESRRRLAIYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ IK +SQL RKA ++ LVIPN+K S+ YEGATV+E G+Y+ PIATLD
Sbjct: 541 FLLSRGQQIKFVSQLFRKALEQKLVIPNMKGDPSDD-QYEGATVIEPTRGYYDVPIATLD 599
Query: 520 FASLYPSIMMAYNLCYSTLVTPED-ARKLNL-PPECVNKTPSGETFVKSNLQKGILPEIL 577
FASLYPSIM A+NLCY+TL+T +D + NL E TP+G+ FV + +KG+L +IL
Sbjct: 600 FASLYPSIMQAHNLCYTTLITRKDRIAQFNLVKDEDYIVTPNGDMFVTTKQRKGLLAQIL 659
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
EELL+ARK+AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+ I+SS
Sbjct: 660 EELLSARKQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLAIASST 719
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TS+GRQMIE TK VE K+ GY H+A+VIYGDTDSVMV+FG + AMKLG EAA
Sbjct: 720 TSFGRQMIEKTKDEVEKKYCIANGYSHDAQVIYGDTDSVMVKFGTKELAEAMKLGEEAAA 779
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
++S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT EK+DKMDTKG+ETVRRDNCLL +
Sbjct: 780 FVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTKTEKYDKMDTKGLETVRRDNCLLAQ 839
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ + L IL+DRD+ GA YVK TI+DLL N++D+S LVITK LTK +DY K AHV
Sbjct: 840 TVIEKVLRMILIDRDVQGAQDYVKDTIADLLQNKVDMSKLVITKALTK--EDYSAKQAHV 897
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA RM+KRDA +AP +GDRV YV+I+ A GAK +E+SEDPIYVLENN+PIDT YYL+NQ
Sbjct: 898 ELAARMKKRDAGSAPALGDRVAYVMIRGAAGAKNFEKSEDPIYVLENNVPIDTKYYLDNQ 957
Query: 878 ISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--- 933
++KPL RIFEPIL + +K LL+GDHTR+IS++ PS G+M+F K+ +C+GCK +
Sbjct: 958 LAKPLTRIFEPILGETKAKSLLTGDHTRTISVAAPSVGGLMRFTKKTQTCMGCKKPLSGK 1017
Query: 934 --SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
S G +C+ C R ELY +T+ ++ +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPI
Sbjct: 1018 TESQGAVCADCAPRVGELYKRTLDRMSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPI 1077
Query: 992 FYRRKKAQKDMAEAKLQLDRWN 1013
FY R KA+KD+ +A +L R++
Sbjct: 1078 FYMRMKAKKDLEDAGKELSRFD 1099
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 208/404 (51%), Gaps = 34/404 (8%)
Query: 12 PPPTPKESWPNKQQATTPTTPVIDDEFLDE-DVFLDETLLPEDEESLILRDIEQ-----R 65
PP TP + K + + V D FL + ES +L + Q R
Sbjct: 22 PPTTPSSAKKRKLDVFSSSPAVFSASQKDRRSKFLGSSQPKSVFESEVLEKLSQDISDRR 81
Query: 66 QDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGV 125
Q+ + W RPP+ ++ SI FQ +D + G +++FGV
Sbjct: 82 QNNTEKDQAWERPPVERLDAAR-DSICFQSIDAEE----------GTLHGGRTTVKLFGV 130
Query: 126 TREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEM 185
T +G+SV V F Y Y+ P P D + + LE ++ + Q H +
Sbjct: 131 TEQGNSVMLHVTDFRHYLYVPAPASFQPKDCNGYKAFLEQQLTQH-------QPAIHSVV 183
Query: 186 VQKRSIMY-YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM-----KSFMTYES 239
++ R M+ + PFL++ V P + S R ++ G + GM MTY+
Sbjct: 184 LRLREDMFGFNGNVQSPFLQVTVTDPKFINSVRSTIEAG-NANWKGMWGSTDGGIMTYD- 241
Query: 240 NVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL--SYCQLEFDCLYSDIISRHPEGEFS 297
N+ + LRFM+DC I G W+E P Y+ + S CQ+E + Y D+++ PEG+++
Sbjct: 242 NIQYVLRFMVDCKIQGMAWVEAPANTYKLIPEHARQSNCQIEAEINYHDLVAHKPEGDWA 301
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
KMAP RILSFDIECAGRKG FPEP HDPVIQ+AN+VT GEK+PF+RNV L + + IV
Sbjct: 302 KMAPLRILSFDIECAGRKGIFPEPEHDPVIQIANVVTRYGEKKPFVRNVFCLDTTSSIVA 361
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V+ +E E +L W+ F+ VDPD++IGYNI FD PYLI +
Sbjct: 362 TQVLEYEKEAKMLSEWQQFLITVDPDIIIGYNIANFDFPYLINR 405
>gi|452986964|gb|EME86720.1| hypothetical protein MYCFIDRAFT_202624 [Pseudocercospora fijiensis
CIRAD86]
Length = 1089
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/621 (61%), Positives = 489/621 (78%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 466 QKEDVHHTMITELYNGTPESRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 525
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL++GQ IK +SQL RKA ++ LV+PN+K S++ YEGATV+E G+Y+ P+ATLD
Sbjct: 526 FLLAKGQQIKFISQLFRKALEQQLVVPNLKTDSSDE-QYEGATVIEPTRGYYDVPVATLD 584
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TL+ KL+L E TP+G+ F + ++KG+L +ILE
Sbjct: 585 FASLYPSIMQAHNLCYTTLLNKTAIEKLDLKKDEDYIVTPNGDLFCTTKVRKGLLSQILE 644
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS T
Sbjct: 645 ELLGARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLAIASSTT 704
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK VE ++T GY H+A+VIYGDTDSVMV+FG + AM+LG +AA+Y
Sbjct: 705 SYGRQMIEKTKAEVEARYTIANGYSHDAQVIYGDTDSVMVKFGPNDLAKAMELGEDAANY 764
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVYYPYLLI+KKRYAGLYWTN K+DKMDTKGIETVRRDNC LV+N
Sbjct: 765 VSSKFIKPIKLEFEKVYYPYLLINKKRYAGLYWTNTTKYDKMDTKGIETVRRDNCRLVQN 824
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L +L+++D+ GA YVK TIS+LL NR+D+S LVITK L+K+ DY K AH E
Sbjct: 825 VIETSLRMLLIEQDVQGAQDYVKETISELLQNRIDMSNLVITKALSKS--DYASKQAHTE 882
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YV++K A G+K YE+SEDP++VLE+N+PIDT YYL+NQ+
Sbjct: 883 LAERMRKRDAGSAPALGDRVAYVMVKGAAGSKGYEKSEDPMFVLEHNLPIDTKYYLDNQL 942
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKA-LIS-- 934
+KPL RIFEPIL + + LL+G+HTR+IS++ P+ G+MKFAK+ +C+GCK LIS
Sbjct: 943 AKPLGRIFEPILGEKKAASLLTGEHTRAISVAAPTMGGLMKFAKKTETCLGCKKPLISKE 1002
Query: 935 --NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G + C+GR ELY +++S+ ELEV F RLWTQCQ CQGS+H +V+C SRDCPIF
Sbjct: 1003 EQGGAVGEECRGRFGELYQRSLSKTAELEVRFARLWTQCQRCQGSMHNEVICASRDCPIF 1062
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A +L R++
Sbjct: 1063 YMRMKAKKDVEDAGKELVRFD 1083
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/344 (38%), Positives = 193/344 (56%), Gaps = 26/344 (7%)
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
+++ A R KWARP L + + + I FQ +D + G A +++FG
Sbjct: 66 KENNAERDQKWARPSLDN-FNPKTSDITFQAIDAEE----------GTLHGGKATVKLFG 114
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT EGHSV V F Y Y++ P +D F LE M + + + ++
Sbjct: 115 VTEEGHSVLLHVTDFLHYLYVAAPVSFTKNDCEPFKVFLESSMAQHS------AAIHSVQ 168
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM-----KSFMTYES 239
MV + ++ +Q P+LKI V P ++ R ++ G + GM +T++
Sbjct: 169 MVLRENMYGFQGNTKSPYLKITVTDPKYISRLRTAIETG-NANYKGMWKVAEGGILTFDM 227
Query: 240 NVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFS 297
+ + LRFM+D + G +W+ + GKY + CQ+E C Y DII+ +GE+S
Sbjct: 228 -IAYVLRFMVDTKMAGMSWVGINAGKYTMLPERDRQGQCQIEAYCHYRDIIAHPIDGEWS 286
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
KMAP R+LSFDIECAGRKG FPE DPVIQ+AN+VT GE++PF+RNV + +C+ IV
Sbjct: 287 KMAPLRVLSFDIECAGRKGVFPEANVDPVIQIANVVTRYGEEKPFVRNVFCMDTCSLIVN 346
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ F+ E +L+AWRDFI EVDPDV+IGYNI FD PYL+++
Sbjct: 347 TQLFEFDQEEKMLMAWRDFIEEVDPDVIIGYNIANFDFPYLLDR 390
>gi|324120726|dbj|BAJ78754.1| DNA polymerase delta catalytic subunit [Tenodera aridifolia]
Length = 1030
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/616 (63%), Positives = 479/616 (77%), Gaps = 6/616 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGNA TRRRLAVYCLKDA+LP +LL+KLM I NY+EMARVTGV +
Sbjct: 413 QKEDVHHSIIADLQNGNATTRRRLAVYCLKDAFLPLKLLEKLMCIINYMEMARVTGVSLP 472
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKA++K VIP G ++ YEGATV+E + G+Y PIATLD
Sbjct: 473 SLLTRGQQIKVVSQLLRKAREKGYVIP-AYGGGVQEEQYEGATVIEPKKGYYADPIATLD 531
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ KL L P+ KTP+ FV +++KG+LPEILE
Sbjct: 532 FSSLYPSIMMAHNLCYTTLLQSGPREKLGLTPDQYIKTPASNYFVTKSVRKGLLPEILEN 591
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AKADLK KDP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 592 LLAARKKAKADLKNEKDPFKQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 651
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE + GYE++AEV+YGDTDSVMV+FGV TVE AMKLGREAADY+
Sbjct: 652 YGRTMIEQTKQEVEQHYNRSNGYENDAEVVYGDTDSVMVKFGVKTVEEAMKLGREAADYV 711
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLISKKRYAGLY+T P+K+DKMD KGIETVRRDN LV N+
Sbjct: 712 SAKFTPPIKLEFEKVYFPYLLISKKRYAGLYFTRPDKYDKMDCKGIETVRRDNSPLVANM 771
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DRD GAV+Y K I+DLL NR+D+S LVITK LTK+ DY K AHVEL
Sbjct: 772 MNTCLQKLLIDRDPNGAVEYAKQVIADLLCNRIDISQLVITKELTKS--DYAAKQAHVEL 829
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD TAP +GDRVPYVII AAK AY ++EDPI+ LEN++PID+ YYLENQ+S
Sbjct: 830 AAKMKKRDPGTAPKLGDRVPYVIISAAKNTPAYMKAEDPIFALENSVPIDSSYYLENQLS 889
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--SNG 936
KPLLRIF PIL + A LL GDHTR+ ++ T + F +++ +CIGCKA++ S
Sbjct: 890 KPLLRIFTPILGEKAESVLLRGDHTRTKAVVTSRVGALSAFTRKKETCIGCKAVLPDSGT 949
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC +C +EA+ Y + ++++ LE F RLWTQCQ CQGSLH++VLCTSRDCPIFY RK
Sbjct: 950 PLCKYCITKEAQFYQQELTRLNALEDRFCRLWTQCQNCQGSLHEEVLCTSRDCPIFYMRK 1009
Query: 997 KAQKDMAEAKLQLDRW 1012
K Q D+ L R+
Sbjct: 1010 KVQLDLVTQDKVLQRF 1025
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 156/334 (46%), Positives = 222/334 (66%), Gaps = 5/334 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW+RPP + +Q ++FQQL+ID+ G + G I+R++GVT EGHSVC
Sbjct: 7 KWSRPPPPALDPNQ-DCLVFQQLEIDHYTGTPKPGMPGSQQGPVPIMRMYGVTSEGHSVC 65
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C VHGF PY ++S P D F + L + R+++ + + + +E+V +++I
Sbjct: 66 CHVHGFSPYLFVSAPGNFTDKDCEPFKKELNKAVMADLRSNREEIREAILAVELVYRQNI 125
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
M YQ +++ F+KI VALP ++A+C+ +L++ + G F +ESNV F +RFM+D
Sbjct: 126 MGYQGEENMGFIKITVALPRLIAACKRLLEKEVIYPPAGSHCFQAFESNVDFDIRFMVDT 185
Query: 252 NIVGGNWIEVPVG--KYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
+IVG +W+E+P G K R + +S CQ+E D + +IS PEGE+SK+APFRILSFDI
Sbjct: 186 DIVGCSWVELPAGSWKLRSPSTYVSRCQIETDVSWEALISHQPEGEWSKVAPFRILSFDI 245
Query: 310 ECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
ECAGRKG FPEP HDPVIQ+AN+V QG K+PFIRNV TL +CAPI+G V+SF E ++
Sbjct: 246 ECAGRKGVFPEPEHDPVIQIANMVIRQGSKEPFIRNVFTLDTCAPIIGSQVLSFAKESEM 305
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
L W F+REVDPD++ GYNI FD+PYLI + +
Sbjct: 306 LEKWAAFVREVDPDILTGYNINNFDIPYLINRAN 339
>gi|1840091|gb|AAB47255.1| DNA polymerase delta' [Mesocricetus auratus]
Length = 1102
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/618 (63%), Positives = 486/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCL+DA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 480 QKEDVQHSIITDLQNGNEQTRRRLAVYCLRDAFLPLRLLERLMVLVNNVEMARVTGVPLG 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 540 YLLSRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 597
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVKS+++KG+LP+ILE
Sbjct: 598 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILEN 657
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 658 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAEVGKLPCLEISQSVTG 717
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 718 FGRQMIEKTKQLVESKYTLENGYNANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 777
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 778 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSQPDTHDRMDCKGLEAVRRDNCPLVAN 837
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 838 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 897
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYL Q+
Sbjct: 898 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLGQQL 957
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ CIGC+++I++
Sbjct: 958 AKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRSVINHQ 1017
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1018 GAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1077
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1078 KKVRKDLEDQERLLQRFG 1095
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/337 (47%), Positives = 214/337 (63%), Gaps = 14/337 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSG------SAAIIRIFGVTR 127
+W RP L + + ++FQQL+ID+ +G + +PL G S I+R FGVT
Sbjct: 73 RWKRPALCA-LDPNTEPLIFQQLEIDHYVGSA----VPLPGGPPTSCNSVPILRAFGVTD 127
Query: 128 EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEM 185
EG SVCC +HGF PYFY P G G + +S + L + R K V IE+
Sbjct: 128 EGFSVCCHIHGFAPYFYTPAPPGFGAEHLSDLQRELSTAISRDQRGGKELSGPAVLAIEL 187
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFAL 245
+ S+ Y PFL+I +ALP +VA R +L++GI++ GLG SF YE+NV F +
Sbjct: 188 CSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGTPSFAPYEANVDFEI 247
Query: 246 RFMIDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
RFM+D +IVG NW+E+P GKY +T K + CQLE D L+SD+IS PEG++ ++AP R+
Sbjct: 248 RFMVDADIVGCNWLELPAGKYVWRTEKKATQCQLEVDVLWSDVISHPPEGQWQRIAPLRV 307
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E
Sbjct: 308 LSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYE 367
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW +FI +D DV+ GYNI FDLPYLI +
Sbjct: 368 REEDLLQAWPNFILAMDSDVITGYNIQNFDLPYLISR 404
>gi|3122029|sp|P97283.1|DPOD1_MESAU RecName: Full=DNA polymerase delta catalytic subunit
gi|1840089|gb|AAB47254.1| DNA polymerase delta catalytic subunit [Mesocricetus auratus]
Length = 1103
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/618 (63%), Positives = 486/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCL+DA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 481 QKEDVQHSIITDLQNGNEQTRRRLAVYCLRDAFLPLRLLERLMVLVNNVEMARVTGVPLG 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 541 YLLSRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVKS+++KG+LP+ILE
Sbjct: 599 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILEN 658
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 659 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAEVGKLPCLEISQSVTG 718
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 719 FGRQMIEKTKQLVESKYTLENGYNANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 778
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 779 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSQPDTHDRMDCKGLEAVRRDNCPLVAN 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 839 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 898
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYL Q+
Sbjct: 899 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLGQQL 958
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ CIGC+++I++
Sbjct: 959 AKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRSVINHQ 1018
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1019 GAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1078
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1079 KKVRKDLEDQERLLQRFG 1096
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/337 (47%), Positives = 215/337 (63%), Gaps = 14/337 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSG------SAAIIRIFGVTR 127
+W RP L + + ++FQQL+ID+ +G + +PL G S I+R FGVT
Sbjct: 74 RWKRPALCA-LDPNTEPLIFQQLEIDHYVGSA----VPLPGGPPTSCNSVPILRAFGVTD 128
Query: 128 EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEM 185
EG SVCC +HGF PYFY P G G + +S + L + R K V IE+
Sbjct: 129 EGFSVCCHIHGFAPYFYTPAPPGFGAEHLSDLQRELSTAISRDQRGGKELSGPAVLAIEL 188
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFAL 245
+ S+ Y PFL+I +ALP +VA R +L++GI++ GLG SF YE+NV F +
Sbjct: 189 CSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGTPSFAPYEANVDFEI 248
Query: 246 RFMIDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
RFM+D +IVG NW+E+P GKY +T K + CQLE D L+SD+IS PEG++ ++AP R+
Sbjct: 249 RFMVDADIVGCNWLELPAGKYVWRTEKKATQCQLEVDVLWSDVISHPPEGQWQRIAPLRV 308
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E
Sbjct: 309 LSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYE 368
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW +FI +DPDV+ GYNI FDLPYLI +
Sbjct: 369 REEDLLQAWPNFILAMDPDVITGYNIQNFDLPYLISR 405
>gi|294660060|ref|XP_002770696.1| DEHA2G22308p [Debaryomyces hansenii CBS767]
gi|199434442|emb|CAR66020.1| DEHA2G22308p [Debaryomyces hansenii CBS767]
Length = 1080
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/618 (62%), Positives = 486/618 (78%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNG ETRRRLAVYCLKD+YLP RLLDKLM + NY EMARVTGVP S
Sbjct: 463 QKEDVHHSIISDLQNGTKETRRRLAVYCLKDSYLPLRLLDKLMCLVNYTEMARVTGVPFS 522
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK + N+VIPN+K GS + YEGATV+E G+Y+ PIATLD
Sbjct: 523 YLLSRGQQIKVISQLFRKCLEDNIVIPNMKSEGSNE-EYEGATVIEPIRGYYDVPIATLD 581
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + + NL + TP+G+ FVK + +KGILP IL+E
Sbjct: 582 FSSLYPSIMMAHNLCYTTLLNKQTIKNFNLTEDDYTLTPNGDYFVKDHKKKGILPTILDE 641
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AK+DLK DP ++ VL+GRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT+
Sbjct: 642 LLTARKKAKSDLKMETDPFKRDVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSVTA 701
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK VE+ ++ G+ +A+VIYGDTDSVMV+FG +E MKLG EAA+++
Sbjct: 702 FGREMIEKTKNEVEEFYSIKNGHPFDAQVIYGDTDSVMVKFGYEDLEKCMKLGEEAANFV 761
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F KPIKLEFEKVY+PYLLI+KKRYAGLYWT+ EK+DKMDTKGIETVRRDNC LV+N+
Sbjct: 762 STKFKKPIKLEFEKVYFPYLLINKKRYAGLYWTSTEKYDKMDTKGIETVRRDNCRLVQNV 821
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +RD+ AV++VK TI+DLL NR+DLS LVITK +K DY K AHVEL
Sbjct: 822 ITKVLEFILQERDVDKAVRFVKQTIADLLQNRVDLSQLVITKAYSK--HDYSAKQAHVEL 879
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERM+KRD +AP +GDRV YVII ++ K YE+SEDP+YVLEN++PID YYLENQ+S
Sbjct: 880 AERMKKRDPGSAPTLGDRVAYVII-SSSSTKNYEKSEDPLYVLENSLPIDVKYYLENQMS 938
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
PL+RIFEPIL + +KE+LSG HTR+I +S P G+M+FAK+ C CK+ + ++
Sbjct: 939 NPLMRIFEPILGERKAKEVLSGAHTRTIKMSAPKTGGLMRFAKKAELCKNCKSPLKSSNH 998
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G LC +C + ELY ++Q+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY R
Sbjct: 999 GALCENCVSKAPELYGNALAQMNYLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFYMR 1058
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KKAQKD+ + +L +W+
Sbjct: 1059 KKAQKDVFQQSQELLKWD 1076
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/332 (42%), Positives = 196/332 (59%), Gaps = 26/332 (7%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDID-YVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
KW RPPL + + FQQLD + +GD+ S+A R FGVTREGHSV
Sbjct: 78 KWDRPPLPKTFDPHSMDVTFQQLDAEETTVGDN----------SSA--RFFGVTREGHSV 125
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIM 192
C V GF YFY+ P+G D Q L G + N N Q V IE+ K SI
Sbjct: 126 LCNVTGFLHYFYVPVPKGFFKD------QHLSGFINYMNNNY---QGVHDIEIKLKESIW 176
Query: 193 YYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y + PF K++V ++ R +RG I+ + L ++Y+ N+ + LR M+DC
Sbjct: 177 GYNKNLKTPFFKVIVNNSKNISKIRTAFERGEIRYENLFPPQNVSYD-NINYLLRLMVDC 235
Query: 252 NIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
I G +WI +P GKY ++ +S CQ+E Y D+IS EG++ MAP RILSFDI
Sbjct: 236 KITGMSWITLPKGKYEIVESFVQISTCQIECSIDYRDLISHPSEGDWLNMAPLRILSFDI 295
Query: 310 ECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
ECAGRKG FPE HDPVIQ+AN+V+ GE +PF+RNV T+ +C+ I+G + TE ++
Sbjct: 296 ECAGRKGVFPEAEHDPVIQIANVVSKAGESRPFVRNVFTVNTCSSIIGSQIFEHTTEEEM 355
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
L+ W++FI +VD DV+IGYN FD+PYL+++
Sbjct: 356 LMHWKEFIVKVDADVIIGYNTANFDIPYLLDR 387
>gi|357613119|gb|EHJ68324.1| DNA polymerase delta catalytic subunit [Danaus plexippus]
Length = 974
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/602 (64%), Positives = 478/602 (79%), Gaps = 7/602 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQN N +TRRRLA+YCLKDAYLP +LL+KLM I NY+EMARVTGVP+
Sbjct: 356 QKEDVHHSIISDLQNENEQTRRRLAMYCLKDAYLPLKLLNKLMCIINYIEMARVTGVPLL 415
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK+K ++P GSE +EGATV+E + G+Y PI+TLD
Sbjct: 416 CLLTRGQQIKVVSQLLRKSKGAGYLMPAYHSQGSED-QFEGATVIEPKKGYYADPISTLD 474
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMA+NLCY+TLV P +++NL + V TPS FVK++ +KG+LPEILE
Sbjct: 475 FASLYPSIMMAHNLCYTTLVPPNIQKEINLNSDDVTVTPSNNMFVKAHKRKGLLPEILES 534
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AKADLKE KDPL+++VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 535 LLAARKKAKADLKEEKDPLKRSVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 594
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE T+ VE K+T GY+ +A VIYGDTDSVMV+FGV T+E +M+LGREAA+++
Sbjct: 595 YGRTMIEFTRAEVEKKYTKSNGYKEDAVVIYGDTDSVMVKFGVKTLEESMELGREAAEFV 654
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ F+KPIKLEFEKVYYPYLLI+KKRYAGLY+T PEK+DKMD KGIETVRRDNC L+ N+
Sbjct: 655 TSKFVKPIKLEFEKVYYPYLLINKKRYAGLYFTKPEKYDKMDCKGIETVRRDNCPLISNM 714
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
++ CL K+L+DRD GA+ Y K ISDLL NR+D+S LVITK LTK +DY K AHVEL
Sbjct: 715 MSTCLQKLLIDRDPDGAINYAKQMISDLLCNRIDISQLVITKELTK--NDYAAKQAHVEL 772
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRDA TAP +GDRVPYV+ AAK AY ++EDPIYVLEN++PID +YYLENQ+S
Sbjct: 773 ANKMKKRDAGTAPKLGDRVPYVLCSAAKNTPAYMKAEDPIYVLENSVPIDFNYYLENQLS 832
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT- 937
KPLLRIFEPIL + A LL G+HTR+ ++ T + F K++ CIGCK ++ N T
Sbjct: 833 KPLLRIFEPILGEKAESLLLKGEHTRTKAMVTSKVGALAAFTKKKEKCIGCKTVMPNDTK 892
Query: 938 --LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LC HC E +LY V ++++L+ F RLWT+CQ CQGSLH++VLCT+RDC IFY R
Sbjct: 893 KALCDHCLKNEGQLYITEVFKLRQLQERFSRLWTECQRCQGSLHEEVLCTNRDCTIFYMR 952
Query: 996 KK 997
KK
Sbjct: 953 KK 954
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 187/281 (66%), Gaps = 9/281 (3%)
Query: 128 EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEM 185
EG+SVCC VHGF PYFY++ P + L + E R++K + + V +++
Sbjct: 2 EGNSVCCHVHGFTPYFYVTVPLNFKESNCHELKSNLNKAILEDLRSNKDNIRETVLEVKL 61
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFAL 245
V+ +SIMYY+ F ++ VALP ++A+ + +++R GL SF YE+N+ F +
Sbjct: 62 VKAKSIMYYKNDDDTTFARVSVALPKLIAAAKRLIERQPTSFGLMNPSF--YETNIDFDI 119
Query: 246 RFMIDCNIVGGNWIEVPVGKYR-----KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
RFM+D ++VG +WIE+P GK+ + K S CQ+E D ++ IS PEGE+ K+A
Sbjct: 120 RFMVDTSVVGCSWIELPPGKWSLRTKDNSVKPESRCQIEVDVAWNQFISHQPEGEWLKLA 179
Query: 301 PFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDV 360
PFRILSFDIECAGRKG FPEP HDPVIQ+A++V QGE +P++RNV TL +CAPIVG V
Sbjct: 180 PFRILSFDIECAGRKGVFPEPKHDPVIQIASMVIRQGESEPYLRNVFTLNTCAPIVGSQV 239
Query: 361 MSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
SF++E ++L W DF RE+D D++ GYNIC FD PYLI +
Sbjct: 240 FSFQSEAEMLSKWSDFFRELDADIITGYNICNFDWPYLINR 280
>gi|27806073|ref|NP_776852.1| DNA polymerase delta catalytic subunit [Bos taurus]
gi|118838|sp|P28339.1|DPOD1_BOVIN RecName: Full=DNA polymerase delta catalytic subunit
gi|162974|gb|AAA30493.1| DNA polymerase-delta catalytic-subunit [Bos taurus]
Length = 1106
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/618 (62%), Positives = 487/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N +EMARVTGVP+
Sbjct: 484 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTGVPLG 543
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 544 YLLSRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 601
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE
Sbjct: 602 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKASVRKGLLPQILEN 661
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 662 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGRLPCLEISQSVTG 721
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 722 FGRQMIEKTKQLVETKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 781
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 782 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 841
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 842 LVTASLRRLLIDRDPSGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 901
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 902 LAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 961
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR+ CIGC+ ++S+
Sbjct: 962 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLSHQ 1021
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1022 GAVCKFCQPRESELYQKEVSHLSALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1081
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1082 KKVRKDLEDQERLLRRFG 1099
Score = 325 bits (833), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 163/336 (48%), Positives = 214/336 (63%), Gaps = 10/336 (2%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL---PLSSGSAAIIRIFGVTREG 129
A+W RP Q + ++FQQL+ID+ + + R L P S S I+R FGVT EG
Sbjct: 76 ARWLRP-APPALDPQMEPLIFQQLEIDHYVAPA-RPLPGAPPPSQDSVPILRAFGVTNEG 133
Query: 130 HSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQ 187
SVCC +HGF PYFY P G GP+ +S + L + R K V +E+
Sbjct: 134 VSVCCHIHGFAPYFYTPAPPGFGPEHLSELQRELSAAISRDQRGGKELTGPAVLAVELCS 193
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRF 247
+ S+ Y PFL+I +ALP ++A R +L++GI+L GLG SF YE+NV F +RF
Sbjct: 194 RESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRLAGLGTPSFAPYEANVDFEIRF 253
Query: 248 MIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRIL 305
M+D +IVG NW+E+P GKY R K + CQLE D L+SD+IS PEGE+ ++AP R+L
Sbjct: 254 MVDTDIVGCNWLELPAGKYILRPEGKA-TLCQLEADVLWSDVISHPPEGEWQRIAPLRVL 312
Query: 306 SFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFET 365
SFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E
Sbjct: 313 SFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYER 372
Query: 366 ERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 373 EEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 408
>gi|324120730|dbj|BAJ78756.1| DNA polymerase delta catalytic subunit [Reticulitermes speratus]
Length = 1033
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/616 (63%), Positives = 482/616 (78%), Gaps = 6/616 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN +TRRRLAVYCLKDAYLP RLLDKLM + NY+EM+RVTGV +S
Sbjct: 416 QKEDVHHSIITDLQNGNPQTRRRLAVYCLKDAYLPLRLLDKLMCVINYMEMSRVTGVSLS 475
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKA++K ++P G ++ YEGATV+E + G+Y P+ATLD
Sbjct: 476 SLLTRGQQIKVVSQLLRKAREKGYLMP-AYGGGVQEEQYEGATVIEPKKGYYSDPVATLD 534
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P +L L P+ KTP+ FV +++KG+LPEILE
Sbjct: 535 FSSLYPSIMMAHNLCYTTLLQPGAPSRLGLSPDQYIKTPASNFFVNKSVRKGLLPEILEN 594
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AKADLKE KDP + VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 595 LLAARKKAKADLKEEKDPFRQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 654
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE + GY+++AEVIYGDTDSVMV+FGV T+E AM+LGR+AA+Y+
Sbjct: 655 YGRTMIEQTKQEVEQHYNVANGYKNDAEVIYGDTDSVMVKFGVKTLEEAMELGRDAANYV 714
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PI+LEFEKVY+PYLLISKKRYAGLY+T P+++DKMD KGIETVRRDN LV N+
Sbjct: 715 STRFPPPIRLEFEKVYFPYLLISKKRYAGLYFTRPDRYDKMDCKGIETVRRDNSPLVANM 774
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DRD GAV+Y K ISDLL NR+D+S LVITK L K+ DY K AHVEL
Sbjct: 775 MNTCLQKLLIDRDPDGAVEYAKQVISDLLCNRIDISQLVITKELAKS--DYAAKQAHVEL 832
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD TAP +GDRVPYVII AAK AY ++EDPIYVLEN++PID++YYLENQ+S
Sbjct: 833 AAKMKKRDPGTAPKLGDRVPYVIIAAAKNTPAYMKAEDPIYVLENSVPIDSNYYLENQLS 892
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS-NGT 937
KPLLRIF PIL + A LL GDHTR+ ++ T + F +R+ +C+GCKA++S +GT
Sbjct: 893 KPLLRIFTPILGEKAESILLRGDHTRTKAVVTSRVGALSAFTQRKETCLGCKAVLSESGT 952
Query: 938 -LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC HC E LY + +++ LE F RLWTQCQ CQGSLH++VLCTSRDCPIFY RK
Sbjct: 953 PLCKHCIPNEGRLYQQELARFTTLEDRFCRLWTQCQRCQGSLHEEVLCTSRDCPIFYMRK 1012
Query: 997 KAQKDMAEAKLQLDRW 1012
K Q D+ L R+
Sbjct: 1013 KVQLDLVVQDKALQRF 1028
Score = 319 bits (818), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 154/337 (45%), Positives = 216/337 (64%), Gaps = 11/337 (3%)
Query: 74 KWARP---PLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGH 130
KW+RP PL+ ++ FQQLDID+ G + G I+R++GVT EG+
Sbjct: 10 KWSRPATPPLNPAD----HALTFQQLDIDHYTGCPIAGMPGSQQGPVPIMRMYGVTMEGN 65
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC VHGF PYF++S P D F L + R++K V + V +E+VQ+
Sbjct: 66 SVCCHVHGFSPYFFVSAPSNFANSDCHPFKMALNKAVLADMRSNKETVREAVVAVELVQR 125
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
++M Y + F+KI +ALP ++A + +L+R G +F +ESN+ F +RFM
Sbjct: 126 LNVMGYNGEAKARFIKITLALPRLIAPAKRLLEREAIYPSAGSHTFQAFESNIDFDIRFM 185
Query: 249 IDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILS 306
+D +VG +W+E+P G++ + T +S CQ+E D + ++S PEGE++K+APFRILS
Sbjct: 186 VDTGLVGCSWVELPAGQWTMQSTQDHVSRCQIEADISWEKLVSHTPEGEWAKVAPFRILS 245
Query: 307 FDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETE 366
FDIECAGRKG FPEP HDPVIQ+AN+V QG+ +PF+RNV TL +CAPIVG V+SF E
Sbjct: 246 FDIECAGRKGIFPEPEHDPVIQIANMVVQQGQPEPFLRNVFTLNTCAPIVGCQVLSFTEE 305
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
R++L W F+REVDPDV+ GYNI FD PYLI + +
Sbjct: 306 RELLEKWAAFVREVDPDVITGYNINNFDFPYLINRAN 342
>gi|181622|gb|AAA35768.1| DNA polymerase delta [Homo sapiens]
Length = 1107
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/618 (63%), Positives = 486/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A + L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMHEGLLMPVVKSEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + +TP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LG EAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGGEAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 962
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR+ CIGC+ ++S+
Sbjct: 963 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLSHQ 1022
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1023 GAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1082
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1083 KKVRKDLEDQEQLLRRFG 1100
Score = 322 bits (825), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 156/333 (46%), Positives = 212/333 (63%), Gaps = 6/333 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGHS 131
+W RP Q + ++FQQL+ID+ +G + P S GS ++R FGVT EG S
Sbjct: 78 RWLRP-TPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSHGSVPVLRAFGVTDEGFS 136
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC +HGF PYFY P G GP+ + + L + +R + V +E+ +
Sbjct: 137 VCCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAINRDSRGGRELTGPAVLAVELCSRE 196
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
S+ Y PFL+I VALP +VA R +L++GI++ GLG SF YE+NV F +RFM+
Sbjct: 197 SMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMV 256
Query: 250 DCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
D +IVG NW+E+P GKY + + + CQLE D L+SD++S PEG + ++AP R+LSFD
Sbjct: 257 DTDIVGCNWLELPAGKYALRLKEKATQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFD 316
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D
Sbjct: 317 IECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEKEED 376
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 377 LLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 409
>gi|238883420|gb|EEQ47058.1| DNA polymerase delta catalytic subunit [Candida albicans WO-1]
Length = 849
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/620 (62%), Positives = 484/620 (78%), Gaps = 10/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNG ETRRRLAVYCLKDA+LP RLLDKLM + NY EMARVTGVP S
Sbjct: 230 QKEDVQHSIITDLQNGTKETRRRLAVYCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFS 289
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK Q+++VIPN+K GS + YEGATV+E G+Y+ PIATLD
Sbjct: 290 YLLSRGQQIKVISQLFRKCLQEDIVIPNLKSEGSNE-EYEGATVIEPERGYYDVPIATLD 348
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + L + KTP+G+ FV SNL+KGILP IL+E
Sbjct: 349 FSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTEDDYTKTPNGDYFVHSNLRKGILPTILDE 408
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLK+ DP +K VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT+
Sbjct: 409 LLTARKKAKADLKKETDPFKKDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVTA 468
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK V++ ++ G+ ++A+VIYGDTDSVMV+FG +E MKLG EAA+Y+
Sbjct: 469 FGREMIEKTKNEVQEYYSKKNGHPYDAKVIYGDTDSVMVKFGYQDLETCMKLGEEAANYV 528
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLI+KKRYAGLYWT PEKFDKMDTKGIETVRRDNC LV+N+
Sbjct: 529 STKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTRPEKFDKMDTKGIETVRRDNCRLVQNV 588
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +RD+P A ++VK TI+DLL NR+DLS LVITK +K DY K AHVEL
Sbjct: 589 ITKVLEFILEERDVPKAQRFVKQTIADLLQNRIDLSQLVITKAYSK--HDYSAKQAHVEL 646
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRD +AP +GDRV YVIIK G K YE+SEDP+YVLEN++PID YYL+ Q++
Sbjct: 647 AERMRKRDPGSAPTLGDRVAYVIIKTG-GDKNYEKSEDPLYVLENSLPIDVKYYLDQQLT 705
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN--- 935
KPL RIF PIL + +KELL+G HTR+I ++ P G+++FAK+ C+ C+ +
Sbjct: 706 KPLERIFIPILGETKTKELLTGSHTRTIKVAAPKTGGLLRFAKKSEVCVSCRTPLKKDNL 765
Query: 936 GTLCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G LC +C G+ +LY +SQ+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY
Sbjct: 766 GALCPNCIKDGKGPDLYGNALSQMNYLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFY 825
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
R KAQKD+ + L+L +W+
Sbjct: 826 MRTKAQKDVHQQALELVKWD 845
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 110/154 (71%)
Query: 248 MIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
MIDC I G +WI +P KY+ +S CQ+E Y D+IS PEGE+ KMAP RILSF
Sbjct: 1 MIDCKITGMSWITLPRDKYKIVNNKISTCQIECSIDYRDLISHPPEGEWLKMAPLRILSF 60
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIECAGRKG FPE HDPVIQ+AN+V GE +PF+RNV T+ +C+ I+G + + E
Sbjct: 61 DIECAGRKGVFPEAEHDPVIQIANVVQKSGESKPFVRNVFTVNTCSSIIGSQIFEHQREE 120
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
D+L+ W++FI +VDPDV+IGYN FD+PY++ +
Sbjct: 121 DMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNR 154
>gi|951001|emb|CAA61282.1| DNA-directed DNA polymerase III [Candida albicans]
Length = 1038
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/620 (62%), Positives = 484/620 (78%), Gaps = 10/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNG ETRRRLAVYCLKDA+LP RLLDKLM + NY EMARVTGVP S
Sbjct: 419 QKEDVQHSIITDLQNGTKETRRRLAVYCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFS 478
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK Q+++VIPN+K GS + YEGATV+E G+Y+ PIATLD
Sbjct: 479 YLLSRGQQIKVISQLFRKCLQEDIVIPNLKSEGSNE-EYEGATVIEPERGYYDVPIATLD 537
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + L + KTP+G+ FV SNL+KGILP IL+E
Sbjct: 538 FSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTEDDYTKTPNGDYFVHSNLRKGILPTILDE 597
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLK+ DP +K VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT+
Sbjct: 598 LLTARKKAKADLKKETDPFKKDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVTA 657
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK V++ ++ G+ ++A+VIYGDTDSVMV+FG +E MKLG EAA+Y+
Sbjct: 658 FGREMIEKTKNEVQEYYSKKNGHPYDAKVIYGDTDSVMVKFGYQDLETCMKLGEEAANYV 717
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLI+KKRYAGLYWT PEKFDKMDTKGIETVRRDNC LV+N+
Sbjct: 718 STKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTRPEKFDKMDTKGIETVRRDNCQLVQNV 777
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +RD+P A ++VK TI+DLL NR+DLS LVITK +K DY K AHVEL
Sbjct: 778 ITKVLEFILEERDVPKAQRFVKQTIADLLQNRIDLSQLVITKAYSK--HDYSAKQAHVEL 835
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRD +AP +GDRV YVIIK G K YE+SEDP+YVLEN++PID YYL+ Q++
Sbjct: 836 AERMRKRDPGSAPTLGDRVAYVIIKTG-GDKNYEKSEDPLYVLENSLPIDVKYYLDQQLT 894
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN--- 935
KPL RIF PIL + +KELL+G HTR+I ++ P G+++FAK+ C+ C+ +
Sbjct: 895 KPLERIFIPILGETKTKELLTGSHTRTIKVAAPKTGGLLRFAKKSEVCVSCRTPLKKDNL 954
Query: 936 GTLCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G LC +C G+ +LY +SQ+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY
Sbjct: 955 GALCPNCIKDGKGPDLYGNALSQMNYLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFY 1014
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
R KAQKD+ + L+L +W+
Sbjct: 1015 MRTKAQKDVHQQALELVKWD 1034
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 182/327 (55%), Gaps = 32/327 (9%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W RPPL S + + I FQQLD + N R FG+T+EGHSV C
Sbjct: 49 WDRPPLPSSF----EDISFQQLDAEEYHDRGN-----------TYARFFGITQEGHSVLC 93
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V GF YFY P+G ++++ F L+ R +E+ K SI Y
Sbjct: 94 NVTGFIHYFYCPVPKGF-EENLTEFTNYLKATFDGIER----------VEITSKESIWGY 142
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIV 254
PF KI ++ R G Q+ + +TY+ N+ + LR MIDC I
Sbjct: 143 SNNIKTPFFKIFAK--NNISKIRSAFQNG-QVPNID--PCITYD-NINYLLRLMIDCKIT 196
Query: 255 GGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGR 314
G +WI +P KY+ +S CQ+E Y D+IS PEGE+ KMAP RILSFDIECAGR
Sbjct: 197 GMSWITLPRDKYKIVNNKISTCQIECSIDYRDLISHPPEGEWLKMAPLRILSFDIECAGR 256
Query: 315 KGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWR 374
KG FPE HDPVIQ+AN+V GE +PF+RNV T+ +C+ I+G + + E D+L+ W+
Sbjct: 257 KGVFPEAEHDPVIQIANVVQKSGESKPFVRNVFTVNTCSSIIGSQIFEHQREEDMLMHWK 316
Query: 375 DFIREVDPDVMIGYNICKFDLPYLIEK 401
+FI +VDPDV+IGYN FD+PY++ +
Sbjct: 317 EFITKVDPDVIIGYNTANFDIPYVLNR 343
>gi|77022890|ref|XP_888889.1| hypothetical protein CaO19_5182 [Candida albicans SC5314]
gi|76573702|dbj|BAE44786.1| hypothetical protein [Candida albicans]
Length = 1038
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/620 (62%), Positives = 484/620 (78%), Gaps = 10/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNG ETRRRLAVYCLKDA+LP RLLDKLM + NY EMARVTGVP S
Sbjct: 419 QKEDVQHSIITDLQNGTKETRRRLAVYCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFS 478
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK Q+++VIPN+K GS + YEGATV+E G+Y+ PIATLD
Sbjct: 479 YLLSRGQQIKVISQLFRKCLQEDIVIPNLKSEGSNE-EYEGATVIEPERGYYDVPIATLD 537
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + L + KTP+G+ FV SNL+KGILP IL+E
Sbjct: 538 FSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTEDDYTKTPNGDYFVHSNLRKGILPTILDE 597
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLK+ DP +K VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT+
Sbjct: 598 LLTARKKAKADLKKETDPFKKDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVTA 657
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK V++ ++ G+ ++A+VIYGDTDSVMV+FG +E MKLG EAA+Y+
Sbjct: 658 FGREMIEKTKNEVQEYYSKKNGHPYDAKVIYGDTDSVMVKFGYQDLETCMKLGEEAANYV 717
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLI+KKRYAGLYWT PEKFDKMDTKGIETVRRDNC LV+N+
Sbjct: 718 STKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTRPEKFDKMDTKGIETVRRDNCRLVQNV 777
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +RD+P A ++VK TI+DLL NR+DLS LVITK +K DY K AHVEL
Sbjct: 778 ITKVLEFILEERDVPKAQRFVKQTIADLLQNRIDLSQLVITKAYSK--HDYSAKQAHVEL 835
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRD +AP +GDRV YVIIK G K YE+SEDP+YVLEN++PID YYL+ Q++
Sbjct: 836 AERMRKRDPGSAPTLGDRVAYVIIKTG-GDKNYEKSEDPLYVLENSLPIDVKYYLDQQLT 894
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN--- 935
KPL RIF PIL + +KELL+G HTR+I ++ P G+++FAK+ C+ C+ +
Sbjct: 895 KPLERIFIPILGETKTKELLTGSHTRTIKVAAPKTGGLLRFAKKSEVCVSCRTPLKKDNL 954
Query: 936 GTLCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G LC +C G+ +LY +SQ+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY
Sbjct: 955 GALCPNCIKDGKGPDLYGNALSQMNYLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFY 1014
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
R KAQKD+ + L+L +W+
Sbjct: 1015 MRTKAQKDVHQQALELVKWD 1034
Score = 250 bits (638), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 181/327 (55%), Gaps = 32/327 (9%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W RPPL S + + I FQQLD + N R FG+T+EGHSV C
Sbjct: 49 WDRPPLPSSF----EDISFQQLDAEEYHDRGN-----------TYARFFGITQEGHSVLC 93
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V GF YFY P+G ++++ F L+ R +E+ K SI Y
Sbjct: 94 NVTGFIHYFYCPVPKGF-EENLTEFTNYLKATFDGIER----------VEITSKESIWGY 142
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIV 254
F KI ++ R G Q+ + +TY+ N+ + LR MIDC I
Sbjct: 143 SNNIKTSFFKIFAK--NNISKIRSAFQNG-QVHNID--PCITYD-NINYLLRLMIDCKIT 196
Query: 255 GGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGR 314
G +WI +P KY+ +S CQ+E Y D+IS PEGE+ KMAP RILSFDIECAGR
Sbjct: 197 GMSWITLPRDKYKIVNNKISTCQIECSIDYRDLISHPPEGEWLKMAPLRILSFDIECAGR 256
Query: 315 KGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWR 374
KG FPE HDPVIQ+AN+V GE +PF+RNV T+ +C+ I+G + + E D+L+ W+
Sbjct: 257 KGVFPEAEHDPVIQIANVVQKSGESKPFVRNVFTVNTCSSIIGSQIFEHQREEDMLMHWK 316
Query: 375 DFIREVDPDVMIGYNICKFDLPYLIEK 401
+FI +VDPDV+IGYN FD+PY++ +
Sbjct: 317 EFITKVDPDVIIGYNTANFDIPYVLNR 343
>gi|406862660|gb|EKD15710.1| DNA polymerase family B [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1103
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/621 (63%), Positives = 488/621 (78%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLAVYCLKDAYLPQRL+DKL + NY EM+RVTGVP +
Sbjct: 480 QKEDVHHTMITELFNGTPESRRRLAVYCLKDAYLPQRLMDKLSCLENYTEMSRVTGVPFN 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +K +SQL RKA ++ LVIPN++ S++ YEGATV+E G+Y+ PIATLD
Sbjct: 540 YLLSRGQQVKFVSQLFRKALEQKLVIPNLRTDASDE-QYEGATVIEPTRGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KL L E TP+ + F + +KG+L +ILE
Sbjct: 599 FASLYPSIIQAHNLCYTTLLNKASVEKLGLVKDEDYIVTPNNDMFCTTKQRKGLLTQILE 658
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARK+AK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS T
Sbjct: 659 ELLTARKQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLAIASSTT 718
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK+ VE K+T GY H+A+VIYGDTDSVMV+FG + AMKLG EAA Y
Sbjct: 719 SYGRQMIEKTKEEVEKKYTIANGYSHDAQVIYGDTDSVMVKFGCKELVEAMKLGEEAAAY 778
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVYYPYLLI+KKRYAGLYWTNP+K+DKMDTKGIETVRRDNC LV+N
Sbjct: 779 VSSKFIKPIKLEFEKVYYPYLLINKKRYAGLYWTNPDKYDKMDTKGIETVRRDNCRLVQN 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L IL+DRD+ GA YVK TISDLL N++D+S LVITK L K DY K AHVE
Sbjct: 839 VIETVLRMILIDRDVQGAQDYVKDTISDLLQNKIDMSKLVITKALAKA--DYTAKQAHVE 896
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRDA +AP +GDRV YVIIK A GAK +ERSEDPI+VLENNIP+DT YYL+NQ+
Sbjct: 897 LAERMKKRDAGSAPTLGDRVAYVIIKGAAGAKNFERSEDPIFVLENNIPVDTKYYLDNQL 956
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + + LL+GDHTRSIS++ PS G+MKFAK+ +C+GCK +
Sbjct: 957 AKPLGRIFEPILGETKANSLLAGDHTRSISVAAPSIGGLMKFAKKTFTCMGCKKPLVGKD 1016
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +CS+C R ELY KT+S+V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1017 EVGGAVCSNCAPRVGELYQKTLSKVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1076
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +A +L R++
Sbjct: 1077 YMRMKAKKDVEDAGKELVRFD 1097
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 201/363 (55%), Gaps = 33/363 (9%)
Query: 51 PEDEESLILRDIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDS 105
P ES +L + Q +++ + + +WARP L+ Q +++FQQ++ + G
Sbjct: 63 PSHFESEVLEKMTQDMAGLKKNNSEKDQQWARPSLADFKEGQ-DNLIFQQIECEE--GTL 119
Query: 106 NRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEG 165
N G A +++FG GHSV V F Y Y++ P + F L+
Sbjct: 120 N--------GGNATVKLFG---NGHSVMLHVTDFLHYLYVAAPVNFTQRECDGFKAYLDS 168
Query: 166 RMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGI- 224
++ + + +++V + ++ +Q + P++KI V P + R ++ G
Sbjct: 169 QLAQHQ------PAIHSVQIVLRENLYGFQGNQQNPYIKITVTDPKFINKVRSTIEGGTA 222
Query: 225 ----QLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT--LSYCQL 278
G G +T++S + + LRFMIDC I+G +W+EV Y S CQ+
Sbjct: 223 NYKGMWKGSGDGGILTFDS-IAYVLRFMIDCKILGMSWVEVAAENYTMIPHNERHSNCQI 281
Query: 279 EFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGE 338
E Y D+I+ PEGE++KMAP RILSFDIECAGRKG FPE +DPVIQ+AN+VT GE
Sbjct: 282 EAHVSYRDLIAHKPEGEWAKMAPLRILSFDIECAGRKGIFPEANYDPVIQIANVVTRYGE 341
Query: 339 KQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
K+PF+RNV L + +PIV + F +E +L WRDF+ EVDPD++IGYNIC FD PYL
Sbjct: 342 KKPFVRNVFCLDNTSPIVNTQLFEFSSEEKMLTKWRDFMEEVDPDIIIGYNICNFDFPYL 401
Query: 399 IEK 401
+++
Sbjct: 402 LDR 404
>gi|13124716|sp|P46588.2|DPOD_CANAL RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|3850149|emb|CAA21949.1| DNA polymerase delta [Candida albicans]
Length = 1038
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/620 (62%), Positives = 484/620 (78%), Gaps = 10/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNG ETRRRLAVYCLKDA+LP RLLDKLM + NY EMARVTGVP S
Sbjct: 419 QKEDVQHSIITDLQNGTKETRRRLAVYCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFS 478
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK Q+++VIPN+K GS + YEGATV+E G+Y+ PIATLD
Sbjct: 479 YLLSRGQQIKVISQLFRKCLQEDIVIPNLKSEGSNE-EYEGATVIEPERGYYDVPIATLD 537
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + L + KTP+G+ FV SNL+KGILP IL+E
Sbjct: 538 FSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTEDDYTKTPNGDYFVHSNLRKGILPTILDE 597
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLK+ DP +K VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT+
Sbjct: 598 LLTARKKAKADLKKETDPFKKDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVTA 657
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK V++ ++ G+ ++A+VIYGDTDSVMV+FG +E MKLG EAA+Y+
Sbjct: 658 FGREMIEKTKNEVQEYYSKKNGHPYDAKVIYGDTDSVMVKFGYQDLETCMKLGEEAANYV 717
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLI+KKRYAGLYWT PEKFDKMDTKGIETVRRDNC LV+N+
Sbjct: 718 STKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTRPEKFDKMDTKGIETVRRDNCRLVQNV 777
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +RD+P A ++VK TI+DLL NR+DLS LVITK +K DY K AHVEL
Sbjct: 778 ITKVLEFILEERDVPKAQRFVKQTIADLLQNRIDLSQLVITKAYSK--HDYSAKQAHVEL 835
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRD +AP +GDRV YVIIK G K YE+SEDP+YVLEN++PID YYL+ Q++
Sbjct: 836 AERMRKRDPGSAPTLGDRVAYVIIKTG-GDKNYEKSEDPLYVLENSLPIDVKYYLDQQLT 894
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN--- 935
KPL RIF PIL + +KELL+G HTR+I ++ P G+++FAK+ C+ C+ +
Sbjct: 895 KPLERIFIPILGETKTKELLTGSHTRTIKVAAPKTGGLLRFAKKSEVCVSCRTPLKKDNL 954
Query: 936 GTLCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G LC +C G+ +LY +SQ+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY
Sbjct: 955 GALCPNCIKDGKGPDLYGNALSQMNYLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFY 1014
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
R KAQKD+ + L+L +W+
Sbjct: 1015 MRTKAQKDVHQQALELVKWD 1034
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 182/327 (55%), Gaps = 32/327 (9%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W RPPL S + + I FQQLD + N R FG+T+EGHSV C
Sbjct: 49 WDRPPLPSSF----EDISFQQLDAEEYHDRGN-----------TYARFFGITQEGHSVLC 93
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V GF YFY P+G ++++ F L+ R +E+ K SI Y
Sbjct: 94 NVTGFIHYFYCPVPKGF-EENLTEFTNYLKATFDGIER----------VEITSKESIWGY 142
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIV 254
PF KI ++ R G Q+ + +TY+ N+ + LR MIDC I
Sbjct: 143 SNNIKTPFFKIFAK--NNISKIRSAFQNG-QVHNID--PCITYD-NINYLLRLMIDCKIT 196
Query: 255 GGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGR 314
G +WI +P KY+ +S CQ+E Y D+IS PEGE+ KMAP RILSFDIECAGR
Sbjct: 197 GMSWITLPRDKYKIVNNKISTCQIECSIDYRDLISHPPEGEWLKMAPLRILSFDIECAGR 256
Query: 315 KGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWR 374
KG FPE HDPVIQ+AN+V GE +PF+RNV T+ +C+ I+G + + E D+L+ W+
Sbjct: 257 KGVFPEAEHDPVIQIANVVQKSGESKPFVRNVFTVNTCSSIIGSQIFEHQREEDMLMHWK 316
Query: 375 DFIREVDPDVMIGYNICKFDLPYLIEK 401
+FI +VDPDV+IGYN FD+PY++ +
Sbjct: 317 EFITKVDPDVIIGYNTANFDIPYVLNR 343
>gi|241957481|ref|XP_002421460.1| DNA polymerase III, putative; DNA polymerase delta catalytic subunit,
putative [Candida dubliniensis CD36]
gi|223644804|emb|CAX40796.1| DNA polymerase III, putative [Candida dubliniensis CD36]
Length = 1040
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/620 (62%), Positives = 483/620 (77%), Gaps = 10/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNG ETRRRLAVYCLKDA+LP RLLDKLM + NY EMARVTGVP S
Sbjct: 421 QKEDVQHSIITDLQNGTKETRRRLAVYCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFS 480
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK Q+N+VIPN+K G+ + YEGATV+E G+Y+ PIATLD
Sbjct: 481 YLLSRGQQIKVISQLFRKCLQENIVIPNLKSEGTNE-EYEGATVIEPERGYYDVPIATLD 539
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + L + KTP+G+ FV S L+KGILP IL+E
Sbjct: 540 FSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTEDDYTKTPNGDYFVNSKLRKGILPTILDE 599
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLK+ DP +K VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT+
Sbjct: 600 LLTARKKAKADLKKETDPFKKDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVTA 659
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK V++ ++ G+ ++A+VIYGDTDSVMV+FG +E MKLG EAA+Y+
Sbjct: 660 FGREMIEKTKNEVQEYYSRKNGHPYDAKVIYGDTDSVMVKFGYQDLETCMKLGEEAANYV 719
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLI+KKRYAGLYWT PEKFDKMDTKGIETVRRDNC LV+N+
Sbjct: 720 STKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTRPEKFDKMDTKGIETVRRDNCRLVQNV 779
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +RD+P A ++VK TI+DLL NR+DLS LVITK +K DY K AHVEL
Sbjct: 780 ITKVLEFILEERDVPKAQRFVKQTIADLLQNRIDLSQLVITKAYSK--HDYSAKQAHVEL 837
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRD +AP +GDRV YVIIK G K YE+SEDP+YVLEN++PID YYL+ Q++
Sbjct: 838 AERMRKRDPGSAPTLGDRVAYVIIKTG-GDKNYEKSEDPLYVLENSLPIDVKYYLDQQLT 896
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN--- 935
KPL RIF PIL + +KELL+G HTR+I ++ P G++KFAK+ C+ C+ +
Sbjct: 897 KPLERIFIPILGETKTKELLTGSHTRTIKVAAPKTGGLLKFAKKSEVCVSCRTPLKKDNL 956
Query: 936 GTLCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G LC +C G+ +LY +SQ+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY
Sbjct: 957 GALCPNCIKDGKGPDLYGNALSQMNYLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFY 1016
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
R KAQKD+ + L+L +W+
Sbjct: 1017 MRTKAQKDVHQQALELVKWD 1036
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/343 (39%), Positives = 186/343 (54%), Gaps = 31/343 (9%)
Query: 59 LRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAA 118
L D+ Q ++ W RPPL S I FQQLD + N
Sbjct: 34 LLDMTQAAHESTTDQAWERPPLPSDLQD---DISFQQLDAEEYRDREN-----------T 79
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
R FG+T+EGHSV C V GF YFY P+G ++++ F L
Sbjct: 80 YARFFGITQEGHSVLCNVTGFIHYFYCPVPKGF-QENLTEFTNYLRVTF----------D 128
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
+ +E+ K SI + PF KI V +A R G + + +TY+
Sbjct: 129 GIEKVEITSKESIWGFSNNIKTPFFKIYVN--NNIAKIRSAFQNG---EVKNIDPCVTYD 183
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
N+ + LR MIDC I G +WI +P KY+ + +S CQ+E Y D+IS PEGE+ K
Sbjct: 184 -NINYLLRLMIDCKITGMSWITLPQDKYKIVSNKISTCQIECSIDYRDLISHPPEGEWLK 242
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGV 358
MAP RILSFDIECAGRKG FPE HDPVIQ+AN+V GE +PF+RNV T+ +C+ I+G
Sbjct: 243 MAPLRILSFDIECAGRKGVFPEAEHDPVIQIANVVQKSGESKPFVRNVFTVNTCSSIIGS 302
Query: 359 DVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ + E D+L+ W++FI +VDPDV+IGYN FD+PY++ +
Sbjct: 303 QIFEHKREEDMLMHWKEFIIKVDPDVIIGYNTANFDIPYVLNR 345
>gi|438134|emb|CAA79895.1| DNA-directed DNA polymerase [Mus musculus]
Length = 1105
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/618 (63%), Positives = 485/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 483 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 543 YLLTRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVKS+++KG+LP+ILE
Sbjct: 601 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILEN 660
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 661 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 720
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 721 FGRQMIEKTKQLVESKYTVENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 780
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ + DKMD KG+E VRRDNC LV N
Sbjct: 781 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDKMDCKGLEAVRRDNCPLVAN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 841 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 901 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 960
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ CIGC+++I +
Sbjct: 961 AKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRSVIDHQ 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+EL K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1021 GAVCKFCQPRESELSQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1081 KKVRKDLEDQERLLQRFG 1098
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/334 (47%), Positives = 214/334 (64%), Gaps = 8/334 (2%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSN---RELLPLSSGSAAIIRIFGVTREGH 130
+W RP L + S + ++FQQL+ID+ +G + LP S S I+R FGVT EG
Sbjct: 76 RWRRPTLRALDPS-TEPLIFQQLEIDHYVGSAPPLPERPLP-SRNSVPILRAFGVTDEGF 133
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC + GF PYFY P G G + +S Q L + R K V IE+ +
Sbjct: 134 SVCCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSR 193
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
S+ Y PFL+I +ALP ++A R +L++G+++ GLG SF YE+NV F +RFM
Sbjct: 194 ESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEIRFM 253
Query: 249 IDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
+D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+LSF
Sbjct: 254 VDADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRVLSF 313
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E
Sbjct: 314 DIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEREE 373
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
D+L AW DFI +DPDV+ GYNI FDLPYLI +
Sbjct: 374 DLLQAWADFILAMDPDVITGYNIQNFDLPYLISR 407
>gi|324120708|dbj|BAJ78745.1| DNA polymerase delta catalytic subunit [Galloisiana yuasai]
Length = 994
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/615 (63%), Positives = 478/615 (77%), Gaps = 5/615 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H+II+DLQNG +TRRRLAVYCLKDAYLP RLLDKLM I NY+EMARVTGV +S
Sbjct: 378 QKEDVQHNIITDLQNGTPQTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVSLS 437
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKAK+K +IP G ++ YEGATV+E + G+Y PIATLD
Sbjct: 438 CLLTRGQQIKVVSQLLRKAKEKGYLIP-THNGGVQEDQYEGATVIEPKRGYYGDPIATLD 496
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ KL L + KTPS FVKS+++KG+LPEILE
Sbjct: 497 FSSLYPSIMMAHNLCYTTLLPVSVKDKLGLTQDQFTKTPSNNLFVKSSVRKGLLPEILES 556
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AK DLK +P ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 557 LLSARKKAKNDLKNETNPFKQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 616
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VED++ G++++A VIYGDTDSVMV+FGV T+E AM LGREAA+Y+
Sbjct: 617 YGRTMIEQTKQEVEDRYKIANGFKYDAMVIYGDTDSVMVKFGVKTLEEAMSLGREAAEYV 676
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F+ PIKLEFEKVY+PYLLI+KKRYAGLY+T P+ +DKMD KGIETVRRDN LV N+
Sbjct: 677 SAKFVSPIKLEFEKVYFPYLLINKKRYAGLYFTKPDHYDKMDCKGIETVRRDNSPLVANM 736
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L++RD GAV Y K ISDLL NR+D+S LVITK L K +DY K AHVEL
Sbjct: 737 MNTCLQKLLIERDPTGAVDYAKQVISDLLCNRIDISQLVITKELAK--NDYTAKQAHVEL 794
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +MRKRDA TAP +GDRVPY+I+ AAK AY ++EDPIYVLENNIPID++YYLENQ+S
Sbjct: 795 ASKMRKRDAGTAPKLGDRVPYIIVAAAKNTPAYMKAEDPIYVLENNIPIDSNYYLENQLS 854
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-SNGT 937
KPLLRIF PIL + ++ LL GDHTR+ S+ T + F +R+ +C+GCKA++ +G
Sbjct: 855 KPLLRIFTPILGDKAESILLRGDHTRTKSMVTSRVGALFAFTRRKETCLGCKAVLPDSGA 914
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LC+HC EA Y +++ +LE F RLWTQCQ CQGSLH++VLCTSRDCPIFY RKK
Sbjct: 915 LCTHCTPNEARFYQTELTKFTQLEDRFCRLWTQCQRCQGSLHEEVLCTSRDCPIFYMRKK 974
Query: 998 AQKDMAEAKLQLDRW 1012
Q D+ + R+
Sbjct: 975 VQIDLVSQDKAIKRF 989
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 136/291 (46%), Positives = 190/291 (65%), Gaps = 2/291 (0%)
Query: 115 GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS 174
G ++R++GVT EG+SVCC VHGF PYF++S P+ F + L M R++
Sbjct: 14 GPVPVMRMYGVTMEGNSVCCHVHGFSPYFFVSAPENFTDKHCLPFQKALNSSMIADLRSN 73
Query: 175 K--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK 232
+ + V +E V ++S+ Y+ + FLKI V LP ++A + +L++ LG
Sbjct: 74 REGIQDAVLAVETVMRQSVFGYRGEDKTTFLKITVTLPRLIAPAKRLLEKTCVYSALGNH 133
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
+ YESN+ F +RFM D +VG +W+E+P GK++ A CQLE D + +S P
Sbjct: 134 DYQAYESNIDFDIRFMTDTGLVGCSWVELPPGKWKMCATKTVRCQLEVDVSWEKFVSHPP 193
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSC 352
EGE+SK+APFRILSFDIECAGRKG FPE HDPVIQ+AN+V QG+++PFIRNV TL +C
Sbjct: 194 EGEWSKVAPFRILSFDIECAGRKGIFPEANHDPVIQIANMVVRQGDREPFIRNVFTLDTC 253
Query: 353 APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
APIVG V+S++ E +L W +F+REVDPD+ GYNI FD PYLI++ +
Sbjct: 254 APIVGSQVLSYKRESAMLKDWANFVREVDPDIFTGYNINNFDFPYLIDRSN 304
>gi|66511388|ref|XP_623795.1| PREDICTED: DNA polymerase delta catalytic subunit [Apis mellifera]
Length = 1105
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/619 (62%), Positives = 492/619 (79%), Gaps = 10/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGNA+TRRRLAVYCLKDAYLP RLLDKLM IF Y+EMARVTGV IS
Sbjct: 486 QKEDVHHSIITDLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIFIYMEMARVTGVSIS 545
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
LL+RGQ IKV+SQLLRK ++K+ ++P + QA EQ +EGATV+E + G+Y PIATL
Sbjct: 546 SLLTRGQQIKVVSQLLRKTREKDYLMPVHRVQASDEQ--FEGATVIEPKRGYYNDPIATL 603
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DF+SLYPSI+MA+NLCY+TL+ + K N+ + + TP+ FVK N++KGILPEILE
Sbjct: 604 DFSSLYPSIIMAHNLCYTTLIKYDKQAKNNIQSDNITITPNDSKFVKVNIRKGILPEILE 663
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL+ARK AKA+LK+ D L++ VLDGRQ ALK+SANSVYGFTGA +G+LPC+EIS+SVT
Sbjct: 664 NLLSARKAAKAELKKETDSLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLEISASVT 723
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MIE TK+ VE+++ GY++NA V+YGDTDSVM++FGV TVE AM+LGREAA+Y
Sbjct: 724 AYGRNMIEQTKQEVEEQYCISKGYKNNAMVVYGDTDSVMIKFGVKTVEEAMELGREAAEY 783
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV N
Sbjct: 784 VSSKFLKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNCPLVAN 843
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DR+ A+ Y K ISDLL NR+D+S LVITK LTKT DY K AHVE
Sbjct: 844 MMNTCLQKLLIDRNPSDAMNYAKQIISDLLCNRIDISQLVITKELTKT--DYAAKQAHVE 901
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA +M+KRDA AP +GDRVPYV I+AAKG AY+++EDPIYVLENNIPIDT+YYLENQ+
Sbjct: 902 LAAKMKKRDAGNAPKLGDRVPYVFIRAAKGTPAYQKAEDPIYVLENNIPIDTNYYLENQL 961
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL+RIFEPIL + A LL GDHTR+ S++T + F +++ C+GCKA++
Sbjct: 962 AKPLVRIFEPILGEKAESLLLKGDHTRTKSVATSKVGALSAFTRKKEVCLGCKAVLVPER 1021
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
LC +C+ +EAELY + ++LE F RLWT+CQ CQGSLHQ+VLCT+RDCPIFY
Sbjct: 1022 EKMALCKYCEPKEAELYQNELYHGRKLEERFCRLWTECQRCQGSLHQEVLCTNRDCPIFY 1081
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
RKK Q ++ + Q++R+
Sbjct: 1082 MRKKVQMELDKQMKQIERF 1100
Score = 293 bits (749), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 209/345 (60%), Gaps = 22/345 (6%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGS----AAIIRIFGVTRE 128
+KW+RPP Q +++FQQ++ID+ G LP GS I+R+FGVT
Sbjct: 76 SKWSRPP-PPELNPQKDALIFQQIEIDHYSGIP----LPGMPGSNMPPVPIMRMFGVTEL 130
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGR----MREANRNSKVPQFVRHIE 184
G+SVCC VHGF PY Y+ P F + L+ MR N ++ V +E
Sbjct: 131 GNSVCCHVHGFSPYLYVIAPTNFNDHHCKLFKEALDKAILKDMRSNPENIQIA--VLAVE 188
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFA 244
V K+++ Y + FLKI +ALP +V+ C+ I++ L + + +ESN+ F
Sbjct: 189 RVFKQNMYGYTGDEKSLFLKITLALPRLVSRCKKIVEEETILSEFKHQ-YTAFESNIDFD 247
Query: 245 LRFMIDCNIVGGNWIEVPVGKYR------KTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
+RFM+D ++VG +WIE+P ++ + CQLE D + I+ P+GE+SK
Sbjct: 248 IRFMVDTSVVGCSWIELPPKTWKLRQHFGHNLPLTARCQLEVDVAWDTFIAHAPQGEWSK 307
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGV 358
+APFRILSFDIECAGRKG FPEP HDPVIQ+AN+V QGE +PF+RN+ TL +CAPIVG
Sbjct: 308 IAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIKQGESEPFLRNIFTLDTCAPIVGC 367
Query: 359 DVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
V+SFETE +L W DF+R++DPD+ GYNI FD PYLI + +
Sbjct: 368 QVLSFETEHKMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRAN 412
>gi|290985690|ref|XP_002675558.1| predicted protein [Naegleria gruberi]
gi|284089155|gb|EFC42814.1| predicted protein [Naegleria gruberi]
Length = 1019
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/629 (62%), Positives = 490/629 (77%), Gaps = 18/629 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KE+VHHSIIS L G+ E RRRLA YCLKDA+LP RLL+KL+ I NY+EMARVTG+P+S
Sbjct: 387 QKEEVHHSIISTLHEGSDEDRRRLASYCLKDAFLPIRLLEKLLIIINYIEMARVTGIPVS 446
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG----------TYEGATVLEARAG 509
F+L RGQ IKV+SQLLRKAK++ ++P + ++G ++ TYEG VL + G
Sbjct: 447 FILKRGQQIKVISQLLRKAKKEEYLMPTISKSGKKESLDEEGETSEETYEGGFVLSPKTG 506
Query: 510 FYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQ 569
+Y+ PI TLDFASLYPSIM+A+NLCY+TL+ ED KL+ + KTPSG+ F+K +Q
Sbjct: 507 YYDIPITTLDFASLYPSIMIAHNLCYTTLLKKEDLAKLS--EDQYVKTPSGDYFIKREVQ 564
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
+G+LP +LEELL ARK+AK D+ +A DPLEKAV++GRQLALKISANSVYGFTGA VG LP
Sbjct: 565 QGLLPLVLEELLQARKQAKKDMDKATDPLEKAVMNGRQLALKISANSVYGFTGAQVGMLP 624
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAM 689
C+EIS SVTS+GR+MI+HTK++VE+ +T GYE NA VIYGDTDSVMV+FG + AM
Sbjct: 625 CLEISQSVTSFGREMIQHTKEMVEENYTIKNGYETNAVVIYGDTDSVMVKFGTKDIRKAM 684
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
+LG A+ IS TF+KPIKLEFEKVYYPYLL+SKKRYAGL WT PEKFDKMD KGI TVR
Sbjct: 685 ELGLHASQEISKTFVKPIKLEFEKVYYPYLLLSKKRYAGLLWTKPEKFDKMDAKGIVTVR 744
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RDNC LV+NLV CLH IL+ R I AV Y KS ISDLLMNRMD+S+LVITK L K D
Sbjct: 745 RDNCALVRNLVNTCLHLILIKRSIESAVNYAKSVISDLLMNRMDISMLVITKALVKKSDK 804
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPID 869
Y+ K +HVELAERM KRD TAP VGDR+PYVI+KA KGAKAYE+SEDPI+VLEN+IPID
Sbjct: 805 YKAKQSHVELAERMSKRDPLTAPRVGDRIPYVIVKAHKGAKAYEKSEDPIWVLENSIPID 864
Query: 870 THYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGC 929
YYLE+QI KPL +IF+PI+ N ++ L SGDHTR I++ TPS GIMKFA++QL C+GC
Sbjct: 865 AQYYLEHQIKKPLEQIFQPIIDN-TQSLFSGDHTRQIAVPTPSKGGIMKFAQKQLRCLGC 923
Query: 930 KALI-SNG--TLCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLC 984
K ++ NG T+CS C KG ++Y +++ E ++ R+WT CQ CQGSLH DVLC
Sbjct: 924 KVVLPKNGGTTICSDCSQKGVAPKIYESAINKRNHYEDIYSRVWTHCQRCQGSLHSDVLC 983
Query: 985 TSRDCPIFYRRKKAQKDMAEAKLQLDRWN 1013
T+RDCP+FY RKK QK++A+ + L+R++
Sbjct: 984 TNRDCPVFYMRKKVQKELADNQEILNRFD 1012
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/311 (44%), Positives = 201/311 (64%), Gaps = 5/311 (1%)
Query: 96 LDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDD 155
+D DY + + +SG+ I+R++GVT EG SV C V G+ PYFYI P+ PD
Sbjct: 1 MDADYTLAEQKPGYPGPASGNVPIVRLYGVTEEGFSVACHVRGYTPYFYIEQPENFNPDQ 60
Query: 156 ISHFHQILEGRMRE--ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMV 213
+F Q L RM E + KV ++V ++ + +K+S+M+Y + FL+I ++P MV
Sbjct: 61 CRNFAQFLNARMSERGIKKAGKVDEYVVNVSIEKKKSLMHYAFDTKKSFLRIEASIPPMV 120
Query: 214 ASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVG--KYRKTAK 271
R L++G + G+G + F+TYESNVLF LR MID NI G NW+E+P G K+R
Sbjct: 121 PHIREFLEKGFNVPGIGFRKFLTYESNVLFVLRCMIDSNIFGANWVELPAGTYKWRNEND 180
Query: 272 TLSYCQLEFDCLYSDIISRHPEGE-FSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVA 330
S+ Q+E D Y D+IS P E + K+AP R LSFDIEC G+ GHFP+ DPVI ++
Sbjct: 181 KTSHAQIEVDISYEDLISHAPTEEGWHKIAPLRTLSFDIECKGKDGHFPQAESDPVIVIS 240
Query: 331 NLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNI 390
N VT+QG+ +P I+N++ L CAPIVGV++ F+TE+++L WR+F+ +DPD++ GYN+
Sbjct: 241 NYVTVQGKSEPLIKNILCLGDCAPIVGVEIHCFKTEKEMLETWRNFVIGIDPDIITGYNV 300
Query: 391 CKFDLPYLIEK 401
FDLPYLI +
Sbjct: 301 INFDLPYLINR 311
>gi|195127716|ref|XP_002008314.1| GI13419 [Drosophila mojavensis]
gi|193919923|gb|EDW18790.1| GI13419 [Drosophila mojavensis]
Length = 1092
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/620 (62%), Positives = 484/620 (78%), Gaps = 8/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLA+YCLKDAYLP RLL KLM I NY+EMARVTGVP+
Sbjct: 473 QKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLGKLMAIVNYMEMARVTGVPLE 532
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKVLSQLLRKAK + ++P+ +GS++ YEGATV+E + G+Y PI+TLD
Sbjct: 533 SLLTRGQQIKVLSQLLRKAKTRGFIMPSYTSSGSDE-QYEGATVIEPKRGYYADPISTLD 591
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMA+NLCY+TL+ P KL L + V +TP+ FVK+ L++G+LPEILE
Sbjct: 592 FASLYPSIMMAHNLCYTTLLLPGAKDKLGLSDDQVERTPANNLFVKAELRRGLLPEILES 651
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRAK DLK +DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 652 LLAARKRAKNDLKVEQDPFKRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 711
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK VE +T GYE++A VIYGDTDSVMV FGV T+E +M+LGREAAD +
Sbjct: 712 YGRTMIELTKNEVESHYTRANGYENDAFVIYGDTDSVMVNFGVKTLERSMELGREAADLV 771
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F++PIKLEFEKVYYPYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDN LV NL
Sbjct: 772 SSKFVRPIKLEFEKVYYPYLLINKKRYAGLYFTKPDKYDKMDCKGIETVRRDNSPLVANL 831
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L++RD GAV Y K I+DLL NR+D+S LVITK L KT DY K AHVEL
Sbjct: 832 MNSCLQKLLIERDPDGAVDYAKQVIADLLCNRIDISQLVITKELAKT--DYAAKQAHVEL 889
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRDA TAP +GDRVPYVI AAK AY+++EDP+YVLEN++PID +YYLE Q+S
Sbjct: 890 AAKMKKRDAGTAPKLGDRVPYVICAAAKNTPAYQKAEDPLYVLENSVPIDANYYLEQQLS 949
Query: 880 KPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
KPLLRIFEPIL + A LL G+HTR+ ++ T G+ F ++ SCIGCK+L+ G
Sbjct: 950 KPLLRIFEPILGDKAESVLLKGEHTRTRTVVTSKVGGLAGFMTKKASCIGCKSLMPKGYE 1009
Query: 937 --TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LC HC+ + +ELY K ++ + LE F RLWT+CQ CQGSLH++V+C++RDCPIFY
Sbjct: 1010 DRALCPHCEPKMSELYQKELAAKRGLEETFSRLWTECQRCQGSLHEEVICSNRDCPIFYM 1069
Query: 995 RKKAQKDMAEAKLQLDRWNF 1014
R+K + D++ + ++ R+
Sbjct: 1070 RQKVRMDLSTQQGRVQRFGL 1089
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 203/335 (60%), Gaps = 8/335 (2%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+W+R P ++ ++FQQLD++ +G + G ++R+FGVT EG+SVC
Sbjct: 64 RWSRAPPPQLNPAE-DRLIFQQLDVENYVGQPLPGMPGAQLGPVPVVRMFGVTMEGNSVC 122
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C VHGF PYFYI P + H+ L ++ R++K V + V +E+VQ+ +I
Sbjct: 123 CHVHGFCPYFYIVAPSNFEERHCAELHEALGKKVIADMRSNKDNVQEAVLAVELVQRLNI 182
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
YQ Q ++KI V LP VA+ +L I + + +E+N+ F +RFM+D
Sbjct: 183 HGYQGDAKQTYIKITVTLPRFVAAASRLLKTTIIMSSFDFQDCRAFENNIDFDIRFMVDT 242
Query: 252 NIVGGNWIEVPVGKYRKTAKTL-----SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILS 306
+VG NWIE+P G +R + S CQLE D Y IS PEGE+SK+AP RILS
Sbjct: 243 QVVGCNWIELPPGVWRLRGRNSKPAPESRCQLEVDVAYDQFISHEPEGEWSKVAPLRILS 302
Query: 307 FDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETE 366
FDIECAGRKG FPE DPVIQ+AN+V QGE +PFIRNV TLK CAPI+G V+ F E
Sbjct: 303 FDIECAGRKGIFPEAKVDPVIQIANMVIRQGETEPFIRNVFTLKECAPIIGSQVLCFAQE 362
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L W F+REVDPD++ GYNI FD+PYL+ +
Sbjct: 363 TQLLDKWGAFVREVDPDILTGYNINNFDVPYLLNR 397
>gi|346327129|gb|EGX96725.1| DNA polymerase delta catalytic subunit [Cordyceps militaris CM01]
Length = 1108
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/622 (62%), Positives = 488/622 (78%), Gaps = 11/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 481 QKEDVHHTMITELFNGTPENRRRLAIYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ IK +SQL RKA ++ LVIPN+K S+ YEGATV+E G+Y+ PIATLD
Sbjct: 541 FLLSRGQQIKFVSQLFRKALEQKLVIPNMKGDPSDD-QYEGATVIEPTRGYYDVPIATLD 599
Query: 520 FASLYPSIMMAYNLCYSTLVTPED-ARKLNL-PPECVNKTPSGETFVKSNLQKGILPEIL 577
FASLYPSIM A+NLCY+TL+T +D + NL E TP+G+TFV + +KG+L +IL
Sbjct: 600 FASLYPSIMQAHNLCYTTLITRKDRIAQFNLVKDEDYIVTPNGDTFVTTKQRKGLLAQIL 659
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
EELL+ARK+AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+ I+SS
Sbjct: 660 EELLSARKQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLAIASST 719
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TS+GRQMIE TK VE K+ GY H+A+VIYGDTDSVMV+FG + AMKLG EAA
Sbjct: 720 TSFGRQMIERTKDEVEKKYCIANGYSHDAQVIYGDTDSVMVKFGTKELAEAMKLGEEAAA 779
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
++S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT EK+DKMDTKG+ETVRRDNCLL +
Sbjct: 780 FVSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKTEKYDKMDTKGLETVRRDNCLLAQ 839
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ + L IL++RD+ GA YVK I+DLL N++D+S LVITK LTK +DY K AHV
Sbjct: 840 TVIEKVLRMILINRDVQGAQDYVKDMIADLLQNKVDMSKLVITKALTK--EDYTAKQAHV 897
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA RM+KRDA +AP++GDRV YV+I+ A GAK +E+SEDPIYVLENN+PIDT YYL+NQ
Sbjct: 898 ELAARMKKRDAGSAPSLGDRVAYVMIRGAAGAKNFEKSEDPIYVLENNVPIDTKYYLDNQ 957
Query: 878 ISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--- 933
++KPL RIFEPIL + ++ LL+GDHTR+IS++ PS G+MKFAK+ +C+GCK +
Sbjct: 958 LAKPLTRIFEPILGETKARSLLTGDHTRTISVAAPSVGGLMKFAKKTQTCMGCKRPLKGK 1017
Query: 934 --SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
S G +C C R ELY +T+ ++ +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPI
Sbjct: 1018 TESEGAVCGDCGPRVGELYKRTLDRMSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPI 1077
Query: 992 FYRRKKAQKDMAEAKLQLDRWN 1013
FY R KA+KD+ +A +L R++
Sbjct: 1078 FYMRMKAKKDLEDAGKELSRFD 1099
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/346 (38%), Positives = 193/346 (55%), Gaps = 26/346 (7%)
Query: 63 EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRI 122
E++Q+ + W RP L + ++ SI FQ +D + G N G +++
Sbjct: 79 ERKQNNTEKDQAWDRPALQALDTTK-DSICFQSIDAEE--GTLN--------GGRTTVKL 127
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRH 182
FGVT +GHSV V F Y Y+ P P D F LE ++ + Q H
Sbjct: 128 FGVTEQGHSVMLHVTDFRHYLYVPAPTSFQPKDCGAFKVFLEQQLAQH-------QPAIH 180
Query: 183 IEMVQKRSIMY-YQQQKSQPFLKIVVALPTMVASCRGILDRGIQ----LDGLGMKSFMTY 237
+++ R M+ + PFL+I V P + S R ++ G + G MTY
Sbjct: 181 SVVLRLREDMFGFNGNVQNPFLQITVTDPKFINSVRSTIEAGNANWKGMWGSSDSGIMTY 240
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL--SYCQLEFDCLYSDIISRHPEGE 295
+ N+ + LRFM+DC I G W+E P Y+ + + S CQ+E + + D+++ PEG+
Sbjct: 241 D-NIQYVLRFMVDCKIQGMAWVEAPANTYKLIPEHMRQSNCQIEAEINHHDLVAHKPEGD 299
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
++KMAP RILSFDIECAGRKG FPEP HDPVIQ+AN+VT GEK+PF+RNV L + + I
Sbjct: 300 WAKMAPLRILSFDIECAGRKGIFPEPEHDPVIQIANVVTRYGEKKPFVRNVFCLDTTSSI 359
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V V+ +E E +L W+ F+ +VDPD++IGYNI FD PYLI +
Sbjct: 360 VATQVLEYEKEAKMLSEWQQFLIKVDPDIIIGYNIANFDFPYLINR 405
>gi|396485292|ref|XP_003842135.1| similar to catalytic subunit DNA polymerase delta [Leptosphaeria
maculans JN3]
gi|312218711|emb|CBX98656.1| similar to catalytic subunit DNA polymerase delta [Leptosphaeria
maculans JN3]
Length = 1115
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/626 (60%), Positives = 485/626 (77%), Gaps = 12/626 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L NG+A +RRRLAVYCLKDAYLPQRLLDKLM + NY EMARVTGVP +
Sbjct: 484 QKEDVHHSMITELFNGDANSRRRLAVYCLKDAYLPQRLLDKLMCLVNYTEMARVTGVPFN 543
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ ++ +SQL RKA L++P++ G YEGATV+E + G+Y++P+ATLD
Sbjct: 544 YLLARGQQVRFISQLFRKALDHQLIVPDLPNQGDSTDQYEGATVIEPKRGYYKQPVATLD 603
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+T + + KL + E TP+G+ F + +KG+L +ILE
Sbjct: 604 FASLYPSIMQAHNLCYTTWLDKQTVEKLKMKKDEDYIVTPNGDMFCTAKTRKGLLTQILE 663
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARK+AK +L DP +KAVL+GRQLALK+SANSVYG TGAT G+LPC+ I+SS T
Sbjct: 664 ELLGARKKAKRELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATNGKLPCLAIASSTT 723
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMIE TK VE K+ GY H+AEVIYGDTDSVMV+FG + AM+LG+EAADY
Sbjct: 724 SFGRQMIEKTKAEVEAKYNIANGYSHDAEVIYGDTDSVMVKFGTSELAEAMRLGQEAADY 783
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWTNP K+DKMDTKGIETVRRDNC LV+
Sbjct: 784 VSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTNPNKWDKMDTKGIETVRRDNCRLVQT 843
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD-----YEVK 813
++ L +L+D+D GA ++VK TISDLL N++D+S LVITK LTK D Y K
Sbjct: 844 VIETSLRMLLIDQDPEGAQEFVKETISDLLQNKIDMSNLVITKALTKQEDKEGKGGYANK 903
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
AHVELAERM+KRDA +AP +GDRV YV+++AA GA+ +E+SEDPIYVLENN+PIDT YY
Sbjct: 904 QAHVELAERMKKRDAGSAPGLGDRVAYVMVRAATGARNFEKSEDPIYVLENNLPIDTRYY 963
Query: 874 LENQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL 932
L+NQ++KPL RIFEPIL + + LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK
Sbjct: 964 LDNQLAKPLGRIFEPILGEKKANSLLTGEHTRSISVAAPTMGGLMKFAKKTQTCMGCKKP 1023
Query: 933 IS-----NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSR 987
++ G +C +C+ R ELY KT+S+V ELEV F RLWTQCQ CQGS+H +V+C SR
Sbjct: 1024 LTAAHEKEGAVCENCRPRIGELYQKTLSKVSELEVRFARLWTQCQRCQGSVHCEVICASR 1083
Query: 988 DCPIFYRRKKAQKDMAEAKLQLDRWN 1013
DCPIFY R KA+KD+ + +L R++
Sbjct: 1084 DCPIFYMRMKARKDVEDGGKELVRFD 1109
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 217/366 (59%), Gaps = 30/366 (8%)
Query: 45 LDETL--LPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVI 102
+ETL + +D E+L ++ E+ Q +W RPPL + Y + ++FQQ++ + +
Sbjct: 64 FEETLEKMTQDMETLKGQNAERDQ-------QWHRPPLPADYNELTEKLVFQQIEAEEGV 116
Query: 103 GDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQI 162
+G +++FGVT +GHSV V GF YFY++ P DD +
Sbjct: 117 ----------LNGGRPTVKLFGVTEDGHSVLLHVTGFLHYFYVAAPMNFHKDDCQPYKTF 166
Query: 163 LEGR-MREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD 221
LE ++ N++S + + ++M + +I+ +Q + P+LKI V P + R ++
Sbjct: 167 LEAECQKQMNQHSAI---IASVQMTMRENILRFQGNQKSPYLKITVNDPKHIGRVRTLVQ 223
Query: 222 RGI----QLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT--LSY 275
+G +L +T++ N+ + LRFMID + G +W+EVP GKYR + S
Sbjct: 224 KGFANYKRLWPASDGGILTFD-NIAYVLRFMIDTKVAGMSWVEVPAGKYRMIEQRDRHSN 282
Query: 276 CQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTL 335
CQ+E YSD+I+ EGE++K+AP RILSFDIECAGRKG FP+ DPVIQ+AN+VT
Sbjct: 283 CQIEAQMHYSDLIAHSSEGEWAKLAPLRILSFDIECAGRKGVFPDADIDPVIQIANVVTR 342
Query: 336 QGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDL 395
GE +PF+RNV L + +PIV V+S+E E ++L+ WRDF+ EVDPDV+IGYN FD
Sbjct: 343 YGEDKPFVRNVFCLDTVSPIVATQVLSYEDEGEMLMKWRDFLEEVDPDVIIGYNTSNFDF 402
Query: 396 PYLIEK 401
PYL+++
Sbjct: 403 PYLLDR 408
>gi|380019903|ref|XP_003693840.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Apis florea]
Length = 1105
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/619 (62%), Positives = 493/619 (79%), Gaps = 10/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGNA+TRRRLAVYCLKDAYLP RLLDKLM IF Y+EMARVTGV IS
Sbjct: 486 QKEDVHHSIITDLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIFIYMEMARVTGVSIS 545
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIP-NVKQAGSEQGTYEGATVLEARAGFYEKPIATL 518
LL+RGQ IKV+SQLLRK ++K+ ++P + QA EQ +EGATV+E + G+Y PIATL
Sbjct: 546 SLLTRGQQIKVVSQLLRKTREKDYLMPVHRGQASDEQ--FEGATVIEPKRGYYNDPIATL 603
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DF+SLYPSI+MA+NLCY+TL+ + K N+ + + TP+ F+K+N++KGILPEILE
Sbjct: 604 DFSSLYPSIIMAHNLCYTTLLKYDKQTKNNIQSDNITITPNDSKFIKANIRKGILPEILE 663
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL+ARK AKA+LK+ DPL++ VLDGRQ ALK+SANSVYGFTGA +G+LPC+EIS+SVT
Sbjct: 664 NLLSARKAAKAELKKETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLEISASVT 723
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MIE TK+ VE+++ GY++NA V+YGDTDSVM++FGV TVE AM+LGREAA+Y
Sbjct: 724 AYGRTMIERTKQEVEEQYCISKGYKNNAVVVYGDTDSVMIKFGVKTVEEAMELGREAAEY 783
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV N
Sbjct: 784 VSSKFLKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNCPLVAN 843
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DR+ A+ Y K ISDLL NR+D+S LVITK LTKT DY K AHVE
Sbjct: 844 MMNTCLQKLLIDRNPNDAMNYAKQIISDLLCNRIDISQLVITKELTKT--DYAAKQAHVE 901
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA +M+KRDA AP +GDRVPYV I+AAKG AY+++EDPIYVLENNIPIDT+YYLENQ+
Sbjct: 902 LAAKMKKRDAGNAPKLGDRVPYVFIRAAKGTPAYQKAEDPIYVLENNIPIDTNYYLENQL 961
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL+RIFEPIL + A LL GDHTR+ S++T + F +++ C+GCKA++
Sbjct: 962 AKPLVRIFEPILGEKAESLLLKGDHTRTKSVATSKVGALSAFTRKKEVCLGCKAVLVPER 1021
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
LC +C+ +EAELY + ++LE F RLWT+CQ CQGSLHQ+VLCTSRDCPIFY
Sbjct: 1022 EKMALCKYCEPKEAELYQNELYLGRKLEEKFCRLWTECQRCQGSLHQEVLCTSRDCPIFY 1081
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
RKK Q ++ +++R+
Sbjct: 1082 MRKKVQLELDTQMKRIERF 1100
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 206/343 (60%), Gaps = 22/343 (6%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGS----AAIIRIFGVTRE 128
+KW RP Q +++FQQ++ID+ G LP GS I+R+FGVT
Sbjct: 76 SKWNRPS-PPELNPQKDALIFQQIEIDHYSGIP----LPGMPGSNIPPVPIMRMFGVTEL 130
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGR----MREANRNSKVPQFVRHIE 184
G+SVCC VHGF PY Y+ P F + L+ MR N +V V +E
Sbjct: 131 GNSVCCHVHGFSPYLYVIAPTNFNDHHCRLFKEALDKAILKDMRSNPENIQVA--VLAVE 188
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFA 244
V K+++ Y + FLKI +ALP +++ C+ I++ L + + +ESN+ F
Sbjct: 189 RVFKQNMYGYTGDEKSLFLKITLALPRLISRCKKIVEEESILSEFRHQ-YTAFESNIDFD 247
Query: 245 LRFMIDCNIVGGNWIEVPVGKYR------KTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
+RFM+D ++VG +WIE+P ++ + CQLE D + I+ P+GE+SK
Sbjct: 248 IRFMVDTSVVGCSWIELPPKTWKLRQHFGHNLPLTARCQLEVDVAWDTFIAHAPQGEWSK 307
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGV 358
+APFRILSFDIECAGRKG FPEP HDPVIQ+AN+V QGE +PF+RN+ TL +CAPIVG
Sbjct: 308 IAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIKQGESEPFLRNIFTLDTCAPIVGC 367
Query: 359 DVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V+SFETE +L W DF+R++DPD+ GYNI FD PYLI +
Sbjct: 368 QVLSFETEHKMLEKWADFVRQLDPDIFTGYNINNFDFPYLINR 410
>gi|429852563|gb|ELA27695.1| DNA polymerase delta catalytic subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 1102
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/622 (62%), Positives = 486/622 (78%), Gaps = 12/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTG+P +
Sbjct: 480 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGIPFN 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA ++ LVIPN++ S++ YEGATV+E G+Y+ PIATLD
Sbjct: 540 FLLSRGQQVKFISQLFRKALEQKLVIPNLRSESSDE-QYEGATVIEPTRGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TLV + K +L E TP+G+TFV +KG+L +ILE
Sbjct: 599 FASLYPSIMQAHNLCYTTLVNKKAIEKFSLVKDEDYIVTPNGDTFVTVKKRKGLLAQILE 658
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARK+AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS T
Sbjct: 659 ELLAARKQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLEIASSTT 718
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMI TK+ VE K+ GY H+A+VIYGDTDSVMV+FG + AMKLG EAA +
Sbjct: 719 SFGRQMIMKTKEEVEKKYCIANGYSHDAQVIYGDTDSVMVKFGTKDLPEAMKLGEEAAGF 778
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV+
Sbjct: 779 VSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQT 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+D+D+ GA YVK TI+DLL N++D+S LVITK LTK DDY K AHVE
Sbjct: 839 VIEKVLRMILIDQDVQGAQDYVKDTIADLLQNKVDMSKLVITKALTK--DDYAAKQAHVE 896
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YV++K A G+K YE SEDPIYVLENN+PIDT YYL+NQ+
Sbjct: 897 LAQRMKKRDAGSAPGLGDRVAYVMVKGAAGSKNYENSEDPIYVLENNVPIDTKYYLDNQL 956
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + + LL+G HTR+I++S P+ G+MKFAK+ +C+GCK +
Sbjct: 957 AKPLGRIFEPILGETKANSLLTGAHTRTIAVSAPTVGGLMKFAKKTQTCMGCKRPLKGKE 1016
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
S G +CS C R ELY + +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1017 ESAGAVCSDCAPRVGELYKN--ERTSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1074
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A +L R++F
Sbjct: 1075 YMRMKAKKDLEDAGKELKRFDF 1096
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 200/347 (57%), Gaps = 28/347 (8%)
Query: 63 EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRI 122
E +Q+ R W RP L + + S++FQQ++ + G + G A +++
Sbjct: 78 EAKQNNTERDQAWDRPELVD-FKPERDSLIFQQIEAEE--GSLH--------GGRATVKL 126
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQF--- 179
FGVT +GHSV V F+ Y Y++ P P+D + F LE S+V Q
Sbjct: 127 FGVTEQGHSVMLHVTDFKHYLYVAAPVAFRPEDCNAFKAYLE---------SQVAQHQPC 177
Query: 180 VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGL--GMKSFMT 236
+ I V + +I +Q P+LKI V P ++ R ++ G GL GM+ +
Sbjct: 178 IHSISFVMRENIYGFQGNVQSPYLKITVMDPKFISRVRSTIETGSANWKGLWKGMEGGVM 237
Query: 237 YESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEG 294
N+ + LRFM+DC I G +W+E P Y+ ++ S CQ+E + + D+I+ PEG
Sbjct: 238 TFDNIQYVLRFMVDCKIHGMSWVEAPAKSYQLLPQSQRQSNCQIEAEISHLDLIAHKPEG 297
Query: 295 EFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP 354
E+SKMAP R LSFDIECAGRKG FPE THDPVIQ+AN+VT GEK+PF+RNV L + +P
Sbjct: 298 EWSKMAPLRTLSFDIECAGRKGIFPEATHDPVIQIANVVTRYGEKKPFVRNVFCLDTTSP 357
Query: 355 IVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
IV ++ F+ E +L W+ F+ +VDPD++IGYNI FD PYL+++
Sbjct: 358 IVATQILEFQKEEKMLSEWQKFLVKVDPDIIIGYNIANFDFPYLLDR 404
>gi|335290039|ref|XP_003127412.2| PREDICTED: DNA polymerase delta catalytic subunit [Sus scrofa]
Length = 1107
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/618 (62%), Positives = 486/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N +EMARVTGVP+
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTGVPLG 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PI TLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMREGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPITTLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTADQFIKTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYGTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPAPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDTHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 962
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR+ CIGC+ ++S+
Sbjct: 963 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLSHQ 1022
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1023 GAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1082
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1083 KKVRKDLEDQEQLLRRFG 1100
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 215/335 (64%), Gaps = 10/335 (2%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL---PLSSGSAAIIRIFGVTREGH 130
+W RP + Q + ++FQQL+ID+ +G + R L P S S ++R FGVT +G
Sbjct: 78 RWLRPTPPT-LDPQTEPLIFQQLEIDHYVGPA-RPLPGAPPPSQSSVPVLRAFGVTDDGV 135
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC +HGF PYFY P G GP+ +S + L + R K V +E+ +
Sbjct: 136 SVCCHIHGFAPYFYTPAPPGFGPEHLSDLQRELNAAISRDQRGGKELTGPAVLAVELCSR 195
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
S+ Y PFL+I +ALP ++A R +L++GI++ GLG SF YE+NV F +RFM
Sbjct: 196 ESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFM 255
Query: 249 IDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILS 306
+D ++VG NW+E+P GKY R K + CQLE D L+SD++S PEG + ++AP R+LS
Sbjct: 256 VDADVVGCNWLELPAGKYLLRPEGKA-TLCQLEADVLWSDVVSHPPEGPWQRIAPLRVLS 314
Query: 307 FDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETE 366
FDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E
Sbjct: 315 FDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYERE 374
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
D+L AW +FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 375 EDLLQAWSNFIRVMDPDVITGYNIQNFDLPYLISR 409
>gi|320581797|gb|EFW96016.1| Catalytic subunit of DNA polymerase delta [Ogataea parapolymorpha
DL-1]
Length = 1102
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/617 (63%), Positives = 480/617 (77%), Gaps = 7/617 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN ETRRRLAVYCLKDAYLP RL +KLM + NY EMARVTGVP S
Sbjct: 486 QKEDVQHSIITDLQNGNQETRRRLAVYCLKDAYLPLRLAEKLMCLVNYTEMARVTGVPFS 545
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ IKV+SQL RK ++VIPN+K G + YEGATV+E G+Y+ PIATLD
Sbjct: 546 FLLSRGQQIKVISQLFRKCLDLDIVIPNIKSEGVNE-EYEGATVIEPVRGYYDVPIATLD 604
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+NLCY+TL+ + +L L E TP+G+ FV +L+KGILP IL+
Sbjct: 605 FASLYPSIMMAHNLCYTTLLNKQTVERLGLKQDEDYIVTPNGDMFVHPHLRKGILPTILQ 664
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARK+AK DLK+ DP +K VL+GRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT
Sbjct: 665 ELLAARKKAKQDLKKETDPFKKQVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSVT 724
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GR MIE TK V+ ++ GYE++A+VIYGDTDSVMV+FG +E M+LG EAA Y
Sbjct: 725 AFGRVMIEQTKAEVQRHYSIENGYEYDAQVIYGDTDSVMVKFGHSDMETCMRLGEEAAAY 784
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PIKLEFEKVY+PYLLI+KKRYAGL+WTNP KFDKMDTKGIETVRRDNC LV+N
Sbjct: 785 VSTKFKHPIKLEFEKVYFPYLLINKKRYAGLFWTNPRKFDKMDTKGIETVRRDNCRLVQN 844
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++T L IL +R++ A Q+VK TI+DLL NR+DLS LVI+K L++ DY K HVE
Sbjct: 845 VITRVLELILEERNVEAAEQFVKKTIADLLQNRVDLSQLVISKALSR--QDYAAKQPHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVIIK A G K YE+SEDP+YVLEN++PIDT YYLENQ+
Sbjct: 903 LAERMRKRDAGSAPTLGDRVAYVIIKTA-GDKNYEKSEDPLYVLENSLPIDTKYYLENQL 961
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG- 936
+ PL RIFEPIL + +KELL G HTR++++S G+MKFA++ +C CK+ I G
Sbjct: 962 ANPLTRIFEPILGERRTKELLHGSHTRTVAVSAAKTGGLMKFARKSNTCKNCKSPIPAGE 1021
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC +C+G ELY + ++++ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY RK
Sbjct: 1022 ALCRNCQGMAGELYGRELAKMNNLETKFSRLWTECQRCQGSLHQEVLCSNKDCPIFYMRK 1081
Query: 997 KAQKDMAEAKLQLDRWN 1013
K QKD+ +L +W+
Sbjct: 1082 KCQKDVLNQAEELKKWD 1098
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 197/352 (55%), Gaps = 25/352 (7%)
Query: 53 DEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPL 112
++E + + E S +W RP + GY + FQQLD + + +
Sbjct: 81 EKELVSMSKKESEASVQSDRQRWDRPAVV-GYDPATYDVDFQQLDAEETLINDE------ 133
Query: 113 SSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANR 172
A +R FGVT EG+SV C V GF YFY+ P+G+ DD+ FH+ L
Sbjct: 134 -----AAVRFFGVTEEGYSVLCNVVGFRHYFYVPVPKGLTQDDLGDFHKYLRTNY----- 183
Query: 173 NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGM 231
Q V+ +E+ K SI Y PFLK+VV + R +RG I+ GL
Sbjct: 184 -----QGVQGLEIALKESIWGYNNNTKLPFLKVVVDGIKHIGKVRSAFERGEIEYKGLFP 238
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT--AKTLSYCQLEFDCLYSDIIS 289
+ N+ F LR M+DC I G W+ P G Y K +S CQLEF Y D++S
Sbjct: 239 PTGSMTFDNIQFLLRMMVDCRITGMGWLRAPAGTYTPVPPEKVVSTCQLEFTIHYKDLVS 298
Query: 290 RHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTL 349
EG++ MAP RILSFDIECAGRKG FPE HDPVIQ+AN+V G+ PF+RNV T+
Sbjct: 299 HASEGKYLNMAPLRILSFDIECAGRKGIFPEAEHDPVIQIANVVAKAGDPVPFVRNVFTV 358
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
KSCAPIVG + S+E+E ++LL W++FI +VDPDV+IGYNI FD PYLI +
Sbjct: 359 KSCAPIVGSETFSYESEEEMLLKWKEFIVKVDPDVIIGYNIANFDFPYLINR 410
>gi|116199119|ref|XP_001225371.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178994|gb|EAQ86462.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1104
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/623 (61%), Positives = 488/623 (78%), Gaps = 11/623 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L G E+RRRLA+YCLKDAYLPQRL++KL + NY EMARVTGVP +
Sbjct: 479 QKEDVHHSMITELFEGTPESRRRLALYCLKDAYLPQRLMEKLSCLENYTEMARVTGVPFN 538
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ +K LSQL RKA ++ LVIPN+ SE+ YEGATV++ +Y+ PIATLD
Sbjct: 539 FLLARGQQVKFLSQLCRKALEQKLVIPNMTTESSEE-QYEGATVIDPIKNYYDVPIATLD 597
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TL+ +D + NL E TPSG+ FV S +KG+L +ILE
Sbjct: 598 FASLYPSIMQAHNLCYTTLIKKKDIERWNLKKDEDYIVTPSGDMFVTSKQRKGLLAQILE 657
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARK+AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS T
Sbjct: 658 ELLSARKQAKRELAAETDPFKKAVLNGRQLALKISANSVYGLTGATNGKLPCLEIASSTT 717
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMIE TK+ VE+++ GY H+A+VIYGDTDSVMV+FG + AM+LG +A+ +
Sbjct: 718 SFGRQMIERTKQEVENRYNIANGYSHDAQVIYGDTDSVMVKFGTTDLAEAMRLGEDASQF 777
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK DKMDTKGIETVRRDNCLLV+
Sbjct: 778 VSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKHDKMDTKGIETVRRDNCLLVQT 837
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+DRD+ GA +YVK TI+DLL N++D+S LVITK LTK DDY K AHVE
Sbjct: 838 VIEKVLRMILIDRDVMGAQEYVKDTIADLLQNKIDMSKLVITKALTK--DDYAAKQAHVE 895
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RMRKRD +AP +GDRV YV++K A G+K +ERSEDP+YVLE+N+PIDT YYL+NQ+
Sbjct: 896 LAQRMRKRDPGSAPGLGDRVAYVMVKGAAGSKNFERSEDPMYVLEHNVPIDTKYYLDNQL 955
Query: 879 SKPLLRIFEPILKN--ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--- 933
+KPL RIFEPIL + +K LLSG HTR+IS++ P+ G+MKFAK+ +C+GCK +
Sbjct: 956 AKPLGRIFEPILGSEAKAKSLLSGAHTRAISVAAPTVGGLMKFAKKTQTCMGCKKPLTGK 1015
Query: 934 --SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
S G +C+ R ELY KT+ + +LEV F RLWTQCQ CQGS+H +V+C+S+DCPI
Sbjct: 1016 EESQGAVCADDAPRVGELYKKTLDKASDLEVRFSRLWTQCQRCQGSMHCEVICSSKDCPI 1075
Query: 992 FYRRKKAQKDMAEAKLQLDRWNF 1014
FY R KA+KD+ +A +L R++F
Sbjct: 1076 FYMRMKAKKDLEDANKELGRFDF 1098
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 197/333 (59%), Gaps = 25/333 (7%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDY-VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
W+RPP+ Y + S+ FQ ++ + +G G A +++FGVT G+SV
Sbjct: 91 WSRPPIPEDYDPEKDSLCFQAIEAEEGTLG-----------GGQATVKLFGVTENGNSVL 139
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
V GF+ Y Y++ P P+D F LE ++ ++ Q + + + + +I
Sbjct: 140 LHVKGFKHYLYVAAPISFTPEDCPKFKAYLETQLAISH------QAIDSVTLTMRENIYG 193
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM-----KSFMTYESNVLFALRFM 248
+Q PF+K+ V P ++ R +++ G + GM S MTY+ N+ + LRFM
Sbjct: 194 FQGNVQNPFIKVTVTDPKLINKVRTLIESG-NANWKGMWKSVDGSIMTYD-NIQYLLRFM 251
Query: 249 IDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
+DC+I G W+E P GKY T S CQ E + Y D+IS P GE+SKMAP RILSFD
Sbjct: 252 VDCSIAGMAWVEAPAGKYIPMTNTQSNCQFEAEISYKDLISHKPVGEWSKMAPLRILSFD 311
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPE D VIQ+AN+VT G+K+PF+RNV L + +PIV VMSF+TE
Sbjct: 312 IECAGRKGIFPEAHTDSVIQIANVVTKYGDKKPFVRNVFCLDTTSPIVATQVMSFDTEDQ 371
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AWR+F+ EVDPD++ GYNI FD PYLI++
Sbjct: 372 MLSAWRNFLMEVDPDIITGYNIANFDFPYLIDR 404
>gi|440635761|gb|ELR05680.1| DNA polymerase delta subunit 1 [Geomyces destructans 20631-21]
Length = 1102
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/622 (62%), Positives = 484/622 (77%), Gaps = 12/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLAVYCLKDAYLPQRLL+KL + NY EMARVTGVP +
Sbjct: 479 QKEDVHHTMITELFNGTPESRRRLAVYCLKDAYLPQRLLEKLSCLENYTEMARVTGVPFN 538
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
FLLSRGQ +K +SQL RKA ++ LVIPN + +A EQ YEGATV+E G+Y+ PIATL
Sbjct: 539 FLLSRGQQVKFVSQLFRKALEQKLVIPNQRTEASGEQ--YEGATVIEPTRGYYDVPIATL 596
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEIL 577
DFASLYPSI+ A+NLCY+TL+ KL L E TP+G+ F + +KG+L +IL
Sbjct: 597 DFASLYPSIIQAHNLCYTTLLNKASVDKLGLKKDEDYIVTPNGDMFCTAKQRKGLLTQIL 656
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
+ELL ARK+AK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+EI+ S
Sbjct: 657 DELLTARKQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLEIAGST 716
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TSYGRQMIE TK VE K+T GY H+A+VIYGDTDSVMV+FG + +MKLG EAA
Sbjct: 717 TSYGRQMIEKTKAEVEAKYTIANGYAHDAQVIYGDTDSVMVKFGTKDLAESMKLGEEAAQ 776
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
Y+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWTNP+K+DKMDTKGIETVRRDNC LV+
Sbjct: 777 YVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTNPDKYDKMDTKGIETVRRDNCRLVQ 836
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
+ L IL+D+D+ GA YVK TISDLL N++D++ LVITK L K DY K AHV
Sbjct: 837 TTIETVLRMILIDQDVQGAQDYVKDTISDLLQNKVDMAKLVITKALAKA--DYANKQAHV 894
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELAERMRKRDA +AP +GDRV YVIIK A GAK +ERSEDP+YVLE+N+PIDT YYL+NQ
Sbjct: 895 ELAERMRKRDAGSAPTLGDRVAYVIIKGAAGAKNFERSEDPLYVLEHNVPIDTKYYLDNQ 954
Query: 878 ISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--- 933
++KPL RIFEP+L + ++ LL+G HTRS++I+ PS G+MKFAK+ +C+GCK +
Sbjct: 955 LAKPLGRIFEPMLGETRARSLLTGAHTRSVAIAAPSVGGLMKFAKKTSTCMGCKKPLVGK 1014
Query: 934 --SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
S +C +C R ELY KT+++V +LEV FGRLWTQCQ CQ S+H +V+C+S+DCPI
Sbjct: 1015 EESGNAVCKNCAPRMGELYTKTLTKVSDLEVRFGRLWTQCQRCQESMHCEVICSSKDCPI 1074
Query: 992 FYRRKKAQKDMAEAKLQLDRWN 1013
FY R KA+KD+ +A +L R++
Sbjct: 1075 FYMRMKAKKDVEDAGKELARFD 1096
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 202/366 (55%), Gaps = 37/366 (10%)
Query: 51 PEDEESLILRDIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDS 105
P ES +L + Q + + + +W RP L + ++ +++FQQ++ +
Sbjct: 60 PSHFESEVLEKLTQDMTGLKNKNSEKDQQWDRPALVD-FNAETDNLIFQQIEAEE----- 113
Query: 106 NRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEG 165
G A +++FGVT GHSV V F Y Y++ P D +F LE
Sbjct: 114 -----GTLHGGKATVKLFGVTETGHSVMLHVTDFLHYLYVAAPVSFVRTDCENFKVFLE- 167
Query: 166 RMREANRNSKVPQF---VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDR 222
S+V Q + +++V + ++ +Q + P+LKI V P + R ++
Sbjct: 168 --------SQVAQHQPAIHSVQIVMRENLYGFQGNQQSPYLKITVTDPKFINRIRTTIEG 219
Query: 223 GIQLDGLGM-----KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT--LSY 275
G + GM +T++S + + LRFM+D + G +W+E P Y+ + S
Sbjct: 220 G-NANWKGMWKGADGGILTFDS-IQYVLRFMVDTKMAGMSWVEAPASSYKMISANERQSN 277
Query: 276 CQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTL 335
CQ+E + Y D+I+ PEGE+SKMAP RILSFDIECAGRKG FPE HDPVIQ+AN+VT
Sbjct: 278 CQIEAEIGYRDLIAHKPEGEWSKMAPLRILSFDIECAGRKGVFPEANHDPVIQIANVVTR 337
Query: 336 QGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDL 395
GEK+PF+RNV L + + IV + F+ E +L+AWRDF+ VDPD++IGYNI FD
Sbjct: 338 YGEKKPFVRNVFCLDTTSLIVNTQIFEFQREEKMLMAWRDFLEMVDPDIIIGYNISNFDF 397
Query: 396 PYLIEK 401
PYL+++
Sbjct: 398 PYLLDR 403
>gi|5011|emb|CAA41968.1| catalytic subunit DNA polymerase delta [Schizosaccharomyces pombe]
Length = 1084
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/617 (63%), Positives = 477/617 (77%), Gaps = 8/617 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SII+DLQNG A++RRRLA+YCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 469 QKEDVHYSIITDLQNGTADSRRRLAIYCLKDAYLPQRLMDKLMCFVNYTEMARVTGVPFN 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ IKV+SQL KA Q +LV+PN++ G+++ YEGATV+E G+Y+ PIATLD
Sbjct: 529 FLLARGQQIKVISQLFCKALQHDLVVPNIRVNGTDE-QYEGATVIEPIKGYYDTPIATLD 587
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIM A+NLCY+TL+ A L L + + TP+G+ FVK +++KG+LP IL
Sbjct: 588 FSSLYPSIMQAHNLCYTTLLDSNTAELLKLKQDVDYSVTPNGDYFVKPHVRKGLLPIILA 647
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+LL ARK+AKADLK+ DP +KAVLDGRQLALK+SANSVYGFTGAT G+LPC+ ISSSVT
Sbjct: 648 DLLNARKKAKADLKKETDPFKKAVLDGRQLALKVSANSVYGFTGATNGRLPCLAISSSVT 707
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK +VE ++ GY H+A VIYGDTDSVMV+FGV T+ AMKLG EAA+Y
Sbjct: 708 SYGRQMIEKTKDVVEKRYRIENGYSHDAVVIYGDTDSVMVKFGVKTLPEAMKLGEEAANY 767
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI F +PYLLISKKRYAGL+WT + +DKMD+KGIETVRRDNC LV
Sbjct: 768 VSDQFPNPINWSFST--FPYLLISKKRYAGLFWTRTDTYDKMDSKGIETVRRDNCPLVSY 825
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L K+L+D+D+ GA + K ISDLL N++D+S VITK L+KT DY K AHVE
Sbjct: 826 VIDTALRKMLIDQDVEGAQLFTKKVISDLLQNKIDMSQHVITKALSKT--DYAAKMAHVE 883
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVIIK A+G + Y RSEDPIYVLENNIPID YYLENQ+
Sbjct: 884 LAERMRKRDAGSAPAIGDRVAYVIIKGAQGDQFYMRSEDPIYVLENNIPIDAKYYLENQL 943
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
SKPLLRIFEPIL + LL GDHTR+IS++ PS GIMKFA + +C+GCKA I G
Sbjct: 944 SKPLLRIFEPILGEKASSLLHGDHTRTISMAAPSVGGIMKFAVKVETCLGCKAPIKKGKT 1003
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC +C R AELY + V+QV +LEV F RLWTQCQ CQGS+HQDV+CTSRDCPIFY R
Sbjct: 1004 ALCENCLNRSAELYQRQVAQVNDLEVRFARLWTQCQRCQGSMHQDVICTSRDCPIFYMRI 1063
Query: 997 KAQKDMAEAKLQLDRWN 1013
K + ++ L R++
Sbjct: 1064 AEHKKLQQSVDLLKRFD 1080
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/355 (40%), Positives = 212/355 (59%), Gaps = 26/355 (7%)
Query: 52 EDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP 111
EDE + ++Q + +S+ +W RP L + + I FQ++D +
Sbjct: 60 EDELAEYASQLDQDEIKSSKDQQWQRPALPA-INPEKDDIYFQEIDSE-----------E 107
Query: 112 LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN 171
+ GS IR+FGVT G+S+ V GF PYFY+ P G P+ + F Q L+ A
Sbjct: 108 FTEGSVPSIRLFGVTDNGNSILVHVVGFLPYFYVKAPVGFRPEMLERFTQDLD-----AT 162
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGI----QLD 227
N V + H + K ++ +Q + PF+KI P +++ R + +RG +L
Sbjct: 163 CNGGV---IDHCIIEMKENLYGFQGNEKSPFIKIFTTNPRILSRARNVFERGEFNFEELF 219
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSD 286
+G+ T+ESN + LRFMIDC++VG NWI +P KY+ + +S CQ+E Y D
Sbjct: 220 PVGV-GVTTFESNTQYLLRFMIDCDVVGMNWIHLPASKYQFRYQNRVSNCQIEAWINYKD 278
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
+IS EG++SKMAP RI+SFDIECAGRKG FP+P+ DPVIQ+A++VT G+ PF+RNV
Sbjct: 279 LISLPAEGQWSKMAPLRIMSFDIECAGRKGVFPDPSIDPVIQIASIVTQYGDSTPFVRNV 338
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ +C+ IVG V F+ + ++L +W F+R+VDPDV+IGYNIC FD+PYL+++
Sbjct: 339 FCVDTCSQIVGTQVYEFQNQAEMLSSWSKFVRDVDPDVLIGYNICNFDIPYLLDR 393
>gi|448536009|ref|XP_003871049.1| Pol3 large subunit of DNA polymerase III [Candida orthopsilosis Co
90-125]
gi|380355405|emb|CCG24924.1| Pol3 large subunit of DNA polymerase III [Candida orthopsilosis]
Length = 1147
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/620 (62%), Positives = 482/620 (77%), Gaps = 10/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN ETRRRLAVYCLKDAYLP RLLDKLM + NY EMARVTGVP S
Sbjct: 528 QKEDVQHSIITDLQNGNKETRRRLAVYCLKDAYLPLRLLDKLMCLVNYTEMARVTGVPFS 587
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK Q+++VIPN+K GS + YEGATV+E G+Y+ PIATLD
Sbjct: 588 YLLSRGQQIKVVSQLFRKCLQEDIVIPNMKSEGSSE-EYEGATVIEPERGYYDVPIATLD 646
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ R L KTP+G+ FV + +KGILP IL E
Sbjct: 647 FSSLYPSIMMAHNLCYTTLLNKNSIRAFGLTEADYTKTPNGDYFVHPDKKKGILPTILNE 706
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AK DLK KDP +K VL+GRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT+
Sbjct: 707 LLTARKKAKTDLKNEKDPFKKDVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSVTA 766
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK V++ ++ G+ ++A+VIYGDTDSVMV+FG ++ MKLG EAA+Y+
Sbjct: 767 FGREMIEKTKNEVQEYYSKKNGHPYDAKVIYGDTDSVMVKFGYQDLDTCMKLGEEAANYV 826
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLI+KKRYAGLYWT P+KFDKMDTKGIETVRRDNC LV+N+
Sbjct: 827 STKFQNPIKLEFEKVYFPYLLINKKRYAGLYWTRPDKFDKMDTKGIETVRRDNCRLVQNV 886
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +R++ A ++VK TI+DLL NR+DLS LVITK +K DY K AHVEL
Sbjct: 887 ITKVLEFILEERNVDKAQRFVKQTIADLLQNRVDLSQLVITKAYSK--HDYSAKQAHVEL 944
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRD +AP +GDRV YVIIK G K YE+SEDP+YVLEN++PID YYLE Q++
Sbjct: 945 AERMRKRDPGSAPTLGDRVAYVIIKTG-GDKNYEKSEDPLYVLENSLPIDVKYYLEQQMT 1003
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
KPL RIF PIL ++ +KELL+G HTR+I +S P G+M+FAK+ C+ CK + ++
Sbjct: 1004 KPLERIFIPILGESKTKELLAGAHTRTIKMSAPKTGGLMRFAKKSEVCVNCKTPLKSGNH 1063
Query: 936 GTLCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G LC +C +G+ LY +SQ+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY
Sbjct: 1064 GALCHNCIDEGKGPGLYTSALSQMNYLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFY 1123
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
RKK QKD+ + L+L +WN
Sbjct: 1124 MRKKVQKDVHQQALELVKWN 1143
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 190/329 (57%), Gaps = 23/329 (6%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W+RP L + + + + FQQLD G+ E A R FG+T+EG+SV C
Sbjct: 145 WSRPSLPADFDPNKEDVSFQQLD-----GEEYNE------NDATYARFFGITQEGYSVLC 193
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V GF YFY P+G D H Q +AN + V +++ K SI Y
Sbjct: 194 NVTGFIHYFYSPVPKGFVKD--QHLMQFTS--YLKANYDGVV-----DVQIQMKESIWGY 244
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGL-GMKSFMTYESNVLFALRFMIDCN 252
PF KI V + RG ++ I+ + L ++ +TY+ N+ + LR MIDCN
Sbjct: 245 NNNIKTPFFKIYVNNNRNITRLRGAFEKAEIRFEDLFPIQQSVTYD-NINYLLRLMIDCN 303
Query: 253 IVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECA 312
I G +WI +P KY+ + +S CQ+E Y D+I+ E E+ KMAP RILSFDIECA
Sbjct: 304 ITGMSWITLPRTKYKLRSSKISTCQIECSIDYKDLIAHQSEKEWLKMAPLRILSFDIECA 363
Query: 313 GRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLA 372
GRKG FPE HDPVIQ+AN+V+ G+ +PF+RNV T+ +CA I+G + E E D+L
Sbjct: 364 GRKGIFPEAEHDPVIQIANVVSKLGDSKPFVRNVFTVNTCASIIGSQIYEHEKEEDMLFH 423
Query: 373 WRDFIREVDPDVMIGYNICKFDLPYLIEK 401
W++F+ EVDPDV+IGYN FD+PYL+++
Sbjct: 424 WKEFVNEVDPDVIIGYNTANFDIPYLLDR 452
>gi|324120768|dbj|BAJ78775.1| DNA polymerase delta catalytic subunit [Ctenocephalides felis]
Length = 1002
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/620 (62%), Positives = 486/620 (78%), Gaps = 8/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQ GN +TRRRLA+YCLKDAYLP RLL+KLM I NY+EMARVTGVP+
Sbjct: 383 QKEDVHHSIISDLQAGNEQTRRRLAMYCLKDAYLPLRLLNKLMCIVNYMEMARVTGVPLG 442
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK+K+ ++P GSE+ YEGATV+E R G+Y P++TLD
Sbjct: 443 CLLTRGQQIKVVSQLLRKSKEAGYLMPTYSGQGSEE-QYEGATVIEPRRGYYADPVSTLD 501
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMA+NLCY+TL+ P KL L + V +TPS FVKS+++KG+LPEILE
Sbjct: 502 FASLYPSIMMAHNLCYTTLIQPGQKEKLGLTDDQVTRTPSNNLFVKSSVRKGLLPEILES 561
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AKADL++ KDP +++VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 562 LLSARKKAKADLRDEKDPFKRSVLDGRQLALKISANSVYGFTGAQVGRLPCLEISGSVTA 621
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE K+T GYE +A VIYGDTDSVMV FGV ++E +M+LGREAA+++
Sbjct: 622 YGRTMIEQTKQEVERKYTIANGYESDAVVIYGDTDSVMVNFGVKSLERSMELGREAAEFV 681
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FI+PIKLEFEKVY+PYLLI+KKRYAGLY+T +K+DK+D KGIETVRRDN LV N+
Sbjct: 682 SQKFIRPIKLEFEKVYFPYLLINKKRYAGLYYTRTDKYDKIDCKGIETVRRDNSPLVANM 741
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL KILV RD GAV+Y K ISDLL N++D+S LVITK L+K+ DY K AHVEL
Sbjct: 742 MNMCLQKILVHRDPEGAVEYAKQVISDLLCNKIDISQLVITKELSKS--DYAAKQAHVEL 799
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRDA TAP +GDRVPYV+ AAK AY ++EDPIYVLEN+IPID+ YYLENQ+S
Sbjct: 800 ANKMKKRDAGTAPKLGDRVPYVLCAAAKNTPAYMKAEDPIYVLENSIPIDSAYYLENQLS 859
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----S 934
KPLLRIFEPIL + ++ LL GDHTR+ S++T + F K++ +CIGCKAL+
Sbjct: 860 KPLLRIFEPILGDKAESLLLRGDHTRTKSMATSRVGALSAFTKKKEACIGCKALLPAGYE 919
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
G LC HC R++ LY + + LE + RLWT+CQ CQGSLH++V+CT+RDCPIFY
Sbjct: 920 KGALCPHCIPRQSVLYINEMESQRNLEEKYCRLWTECQRCQGSLHEEVICTNRDCPIFYM 979
Query: 995 RKKAQKDMAEAKLQLDRWNF 1014
RKK Q ++ +++R+
Sbjct: 980 RKKIQIELDTQVKRVERFGL 999
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 136/295 (46%), Positives = 200/295 (67%), Gaps = 9/295 (3%)
Query: 115 GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS 174
G I+R+FG+T EG+S+CC VHGF PY +++ P+ F L + R++
Sbjct: 14 GPVPIMRMFGITMEGNSICCHVHGFSPYLFVTAPKTFDDSHCEPFKTALNKAVIADMRSN 73
Query: 175 K--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGM 231
+ V + + +E+ +++S+M+Y F+KI VALP +VA+ + +L++G I DG G+
Sbjct: 74 RENVTEAILSVELAKRKSLMHYSGDSDNLFIKITVALPRLVAAVKRLLEKGDIYPDG-GL 132
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR-----KTAKTLSYCQLEFDCLYSD 286
+ +E+N+ F +RFM+D +VG +WIE+P GK+R K +S CQ+E D +
Sbjct: 133 HDYRAFETNIDFDIRFMVDTGVVGCSWIELPAGKWRLRNGFSNPKPISRCQIEVDIGWDA 192
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
+++ PEG+++K+APFRILSFDIECAGRKG FPEP HDPVIQ+AN+V QGE++P++RNV
Sbjct: 193 FVAKVPEGDWAKVAPFRILSFDIECAGRKGIFPEPQHDPVIQIANMVITQGEQEPYLRNV 252
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
TLKSCAPIVG V+ ++ E ++L AW FIRE+DPDV GYNI FD PYL+ +
Sbjct: 253 FTLKSCAPIVGSQVLCYDKEEELLEAWAAFIRELDPDVFTGYNINNFDFPYLLRR 307
>gi|330921129|ref|XP_003299297.1| hypothetical protein PTT_10256 [Pyrenophora teres f. teres 0-1]
gi|311327099|gb|EFQ92613.1| hypothetical protein PTT_10256 [Pyrenophora teres f. teres 0-1]
Length = 1115
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/626 (60%), Positives = 482/626 (76%), Gaps = 12/626 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L NG++ +RRRLAVYCLKDAYLPQRLLDKLM + NY EMARVTGVP +
Sbjct: 484 QKEDVHHSMITELFNGDSNSRRRLAVYCLKDAYLPQRLLDKLMCLVNYTEMARVTGVPFN 543
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++LSRGQ I+ +SQL RKA L++P++ G YEGATV+E + G+Y P+ATLD
Sbjct: 544 YILSRGQQIRFISQLFRKALDHQLIVPDLPNQGDSSDQYEGATVIEPKRGYYRDPVATLD 603
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+T + + KL + E TP G+ F + +KG+L EILE
Sbjct: 604 FASLYPSIMQAHNLCYTTWLDKQTVEKLKMKKDEDYIVTPHGDMFCTAKTRKGLLTEILE 663
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
E+L+ARK+AK +L DP +KAVL+GRQLALK++ANSVYG TGAT G+LPC+ I+SS T
Sbjct: 664 EVLSARKKAKRELATETDPFKKAVLNGRQLALKVTANSVYGLTGATNGKLPCLAIASSTT 723
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMIE TK VE K+ GY H+AEVIYGDTDSVMV+FG +E AMKLG EAA Y
Sbjct: 724 SFGRQMIERTKAEVEAKYNIANGYTHDAEVIYGDTDSVMVKFGTSNLEEAMKLGEEAATY 783
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ F+KPIKLEFEKVY+PYLLI+KKRYAGLYWTNP K+DKMDTKGIETVRRDNC LV+
Sbjct: 784 VTSKFLKPIKLEFEKVYFPYLLINKKRYAGLYWTNPHKWDKMDTKGIETVRRDNCRLVQT 843
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD-----YEVK 813
++ L +L+D+D GA +VK TI+DLL N++D+S LVITK LTK D Y K
Sbjct: 844 VIETSLRMLLIDQDPEGAQAFVKETIADLLQNKVDMSNLVITKALTKQEDKDGKGGYANK 903
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
AHVELAERM+KRDA +AP +GDRV YV+I+AA GAK +E+SEDP+YVLENN+PIDT YY
Sbjct: 904 QAHVELAERMKKRDAGSAPALGDRVAYVMIRAATGAKNFEKSEDPLYVLENNLPIDTRYY 963
Query: 874 LENQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK-- 930
L+NQ++KPL RIFEPIL + + LL+GDHTRSI+++ P+ G+MKFAK+ +C+GCK
Sbjct: 964 LDNQLAKPLGRIFEPILGEKKAASLLTGDHTRSITVAAPTMGGLMKFAKKTSTCMGCKKP 1023
Query: 931 ---ALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSR 987
A +G +C +C+ R ELY KT+S+V ELEV F RLWTQCQ CQGS+H +V+C S+
Sbjct: 1024 LVAAHEKDGAVCENCRPRIGELYTKTLSKVSELEVRFSRLWTQCQRCQGSVHCEVICASK 1083
Query: 988 DCPIFYRRKKAQKDMAEAKLQLDRWN 1013
DCPIFY R KA+KD+ +A +L R++
Sbjct: 1084 DCPIFYMRMKARKDVQDAGKELVRFD 1109
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 213/371 (57%), Gaps = 40/371 (10%)
Query: 45 LDETL--LPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVI 102
+ETL + +D ES+ + E+ Q+ W RP + + ++ FQQ+D + +
Sbjct: 64 FEETLEKMTDDVESVKKGNKEKDQE-------WDRPAIPEDFSEMTHNLTFQQIDAEEGV 116
Query: 103 GDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQI 162
+G A +++FGVT GHSV V GF+ YFY++ P +D +
Sbjct: 117 ----------LNGGRATVKLFGVTENGHSVLLHVTGFQHYFYVAAPIDFRKEDCEPYKTF 166
Query: 163 LEGR-MREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD 221
LEG + N++S V + ++M + +I+ +Q + P+LKI V P M+ R ++
Sbjct: 167 LEGECQKNFNQHSAV---IASVQMCMRENILRFQGNQKSPYLKITVCDPKMINRVRMMVQ 223
Query: 222 RG---------IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTA 270
+G + DG+ +T++ N+ + LRFMID ++ G W+E P KYR
Sbjct: 224 KGNANYKRLWPAREDGI-----LTFD-NIAYVLRFMIDTSVTGMCWVEAPASKYRMINPR 277
Query: 271 KTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVA 330
+ S CQ E Y D+I+ EGE++K+AP RILSFDIECAGRKG FPE DPVIQ+A
Sbjct: 278 ERHSNCQFEAQVHYEDLIAHSSEGEWAKLAPLRILSFDIECAGRKGIFPEANVDPVIQIA 337
Query: 331 NLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNI 390
N+VT GE++PF+RNV L + + I ++ SF+ E ++L+ WRDF+ +VDPDV+IGYNI
Sbjct: 338 NVVTRYGEQKPFVRNVFCLDTVSSIASTEIFSFQNEGEMLMKWRDFVEQVDPDVIIGYNI 397
Query: 391 CKFDLPYLIEK 401
FD PYL+++
Sbjct: 398 NNFDFPYLLDR 408
>gi|348559458|ref|XP_003465533.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cavia
porcellus]
Length = 1105
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/618 (62%), Positives = 484/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+S
Sbjct: 483 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLS 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+ ++ +++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 543 YLLSRGQQVKVVSQLLRQTMRERMLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + +TP+G+ FVKS+++KG+LP+ILE
Sbjct: 601 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLDADQFIRTPTGDEFVKSSVRKGLLPQILEN 660
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 661 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 720
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAA ++
Sbjct: 721 FGRQMIEKTKQLVESKYTVANGYSADAKVVYGDTDSVMCRFGVSSVAEAMDLGREAASWV 780
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 781 SSHFPPPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDSHDRMDCKGLEAVRRDNCPLVAN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 841 LVTASLRRLLIDRDPEGAVAHAKDIISDLLCNRIDISQLVITKELTRAAADYSGKQAHVE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 901 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 960
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FA R+ CIGC+ ++S+
Sbjct: 961 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFATRRSCCIGCRTVLSHE 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1021 GAVCRFCQPRESELYQKEVSHLNALEERFTRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1081 KKVRKDLEDQEKLLRRFG 1098
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/409 (41%), Positives = 242/409 (59%), Gaps = 14/409 (3%)
Query: 2 NRSNGSARKRPPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESL---I 58
R GS PP + +++ P + +D L E++ + L ++EE+L +
Sbjct: 4 KRQRGSGPGLPPKRARAGLWDEE---PPPSQFEEDLALLEEMEAENRLREQEEEALQPAL 60
Query: 59 LRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGS 116
++ + A+ +W RP L Q + ++FQQL+ID+ +G + P
Sbjct: 61 EGAVDGQLSSAAIDPRWLRPSLPPPD-PQKEPLIFQQLEIDHYVGSAPPLPGRTPPLHNQ 119
Query: 117 AAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK- 175
++R FGVT EG SVCC +HGF PYFY+ P G G + ++ + L + R K
Sbjct: 120 VPVLRAFGVTDEGVSVCCHIHGFAPYFYVPAPPGFGAEHLADLQRELSAAISRDQRGGKE 179
Query: 176 -VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
V +E+ + S+ Y PFL+I +ALP +VA R +L++GI++ GLG SF
Sbjct: 180 LAGPAVLAMELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSF 239
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHP 292
YE+NV F +RFM+D +IVG NW+E+P GKY R+ K + CQLE D L+SD++S P
Sbjct: 240 APYEANVDFEIRFMVDTDIVGCNWLELPAGKYVLRQKEKA-TLCQLEVDVLWSDVVSHSP 298
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSC 352
EG + ++AP R+LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ C
Sbjct: 299 EGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPC 358
Query: 353 APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
API+G V S+E E D+L AW F+R VDPDV+ GYNI FDLPYLI +
Sbjct: 359 APILGARVQSYEQEEDLLQAWSLFVRTVDPDVITGYNIQNFDLPYLISR 407
>gi|73946992|ref|XP_851285.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 1 [Canis
lupus familiaris]
Length = 1107
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/618 (62%), Positives = 485/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N +EMARVTGVP+
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTGVPLG 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMREGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTKDQFIKTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY NA+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYSANAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPPPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 962
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR CIGC+ ++++
Sbjct: 963 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRHSCCIGCRTVLNHQ 1022
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RL TQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1023 GAVCKFCQPRESELYQKEVSHLNALERRFSRLCTQCQRCQGSLHEDVICTSRDCPIFYMR 1082
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1083 KKVRKDLEDQEQLLRRFG 1100
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/342 (46%), Positives = 213/342 (62%), Gaps = 22/342 (6%)
Query: 73 AKWARP---PLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPL------SSGSAAIIRIF 123
A+W RP PL Q + ++FQQL+ID+ +G + PL S S I+R F
Sbjct: 77 ARWLRPTPPPLDP----QKEPLIFQQLEIDHYVGPAQ----PLPGAPTPSRDSVPILRAF 128
Query: 124 GVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVR 181
GVT EG SVCC +HGF PYFY P G G + + + L + R K V
Sbjct: 129 GVTDEGVSVCCHIHGFAPYFYTPAPSGFGSEHLGDLQRELNAAISRDQRGGKELTGPAVL 188
Query: 182 HIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNV 241
+E+ + S+ Y PFL+I +ALP +VA R +L++GI++ GLG SF YE+NV
Sbjct: 189 SVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANV 248
Query: 242 LFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKM 299
F +RFM+D +IVG NW+E+P KY R K + CQLE D L+SD++S PEG++ ++
Sbjct: 249 DFEIRFMVDTDIVGCNWLELPAEKYILRPQGKA-TLCQLEADVLWSDVVSHPPEGQWQRI 307
Query: 300 APFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVD 359
AP R+LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G
Sbjct: 308 APLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAK 367
Query: 360 VMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V S+E E ++L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 368 VQSYEREEELLQAWSTFIRTMDPDVITGYNIQNFDLPYLISR 409
>gi|149235442|ref|XP_001523599.1| DNA polymerase delta catalytic subunit [Lodderomyces elongisporus
NRRL YB-4239]
gi|146452578|gb|EDK46834.1| DNA polymerase delta catalytic subunit [Lodderomyces elongisporus
NRRL YB-4239]
Length = 1087
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/620 (62%), Positives = 481/620 (77%), Gaps = 10/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNG ETRRRLAVYCLKDAYLP RLLDKLM + NY EMARVTGVP S
Sbjct: 468 QKEDVQHSIITDLQNGTKETRRRLAVYCLKDAYLPLRLLDKLMCLVNYTEMARVTGVPFS 527
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK Q+ +VIPN+K GS +EGATV+E G+Y+ PIATLD
Sbjct: 528 YLLSRGQQIKVISQLFRKCLQERIVIPNMKSEGSNV-EFEGATVIEPERGYYDVPIATLD 586
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL++ L E KTP+G+ FVK N ++GILP IL E
Sbjct: 587 FSSLYPSIMMAHNLCYTTLISKNTIESYKLTEEDYTKTPNGDYFVKPNKKQGILPTILNE 646
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AK DLK DP +K VL+GRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT+
Sbjct: 647 LLTARKKAKTDLKNETDPFKKDVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSVTA 706
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK V++ ++ G+ ++A+VIYGDTDSVMV+FG +E MKLG EAA+Y+
Sbjct: 707 FGREMIEKTKNEVQEYYSKKNGHPYDAKVIYGDTDSVMVKFGYQDLETCMKLGEEAANYV 766
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLI+KKRYAGLYWTNP+KFDKMDTKGIETVRRDNC LV+N+
Sbjct: 767 SQKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTNPKKFDKMDTKGIETVRRDNCRLVQNV 826
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +RD+ A ++VK TI+DLL NR+DLS LVITK +K DY K AHVEL
Sbjct: 827 ITKVLEFILEERDVEKAQRFVKQTIADLLQNRVDLSQLVITKAYSK--HDYSAKQAHVEL 884
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRD +AP +GDRV YVI+K+ G K YE+SEDP+YVLEN++PID YYL+ Q++
Sbjct: 885 AERMRKRDPGSAPTLGDRVAYVIVKSG-GEKNYEKSEDPLYVLENSLPIDVKYYLDQQMT 943
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN--- 935
KPL RIF PIL ++ +KELL+G HTR+I +S P G+M+FAK+ C+ CK +S+
Sbjct: 944 KPLERIFIPILGESKTKELLAGAHTRTIKMSAPKTGGLMRFAKKSEVCVSCKTPLSSTNR 1003
Query: 936 GTLCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G LC +C G+ LY +SQ+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY
Sbjct: 1004 GALCPNCIKDGKGQALYTNALSQMNFLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFY 1063
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
RKK QKD+ + L++ +W+
Sbjct: 1064 MRKKVQKDVHQQALEMVKWD 1083
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 191/329 (58%), Gaps = 24/329 (7%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W+RPPL + + Q I FQQLD + + G + R FG+T+EG+SV C
Sbjct: 86 WSRPPLPADFDPTEQDISFQQLDAE-----------EYNDGDSTYARFFGITQEGYSVLC 134
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V GF YFY P+G + I F L+ + V +++ + SI +
Sbjct: 135 NVTGFIHYFYYPVPKGFNKNLIPQFTSYLKANY----------EGVVEVKIEFRESIWGF 184
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGL-GMKSFMTYESNVLFALRFMIDCN 252
PF +I V + RG +R I +GL ++ +TY+ N+ + LR MIDC+
Sbjct: 185 NNNTKTPFFQIFVNNNRNITKLRGAFERAEISFEGLFPLQQSVTYD-NINYLLRLMIDCH 243
Query: 253 IVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECA 312
I G +WI +P KY +S CQ+E Y D+IS EG++ KMAP RILSFDIECA
Sbjct: 244 ITGMSWITLPKTKYSMVGLKISSCQIECSIDYKDLISHPSEGKWLKMAPLRILSFDIECA 303
Query: 313 GRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLA 372
GRKG FPE DPVIQ+AN+V+ G+ +PF+RNV T+ +CAPI+G + + E D+LL
Sbjct: 304 GRKGIFPEAEQDPVIQIANVVSKLGDAKPFVRNVFTVNTCAPIIGSQIFEHQKEEDMLLH 363
Query: 373 WRDFIREVDPDVMIGYNICKFDLPYLIEK 401
W+DF+ EVDPDV+IGYNI FD+PYL+++
Sbjct: 364 WKDFVNEVDPDVIIGYNIANFDIPYLLDR 392
>gi|190344317|gb|EDK35969.2| hypothetical protein PGUG_00067 [Meyerozyma guilliermondii ATCC 6260]
Length = 1075
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/618 (61%), Positives = 484/618 (78%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H+IISDLQNG ETRRRLAVYCLKDAYLP RLL+KLM + NY EMARVTGVP S
Sbjct: 458 QKEDVQHTIISDLQNGTRETRRRLAVYCLKDAYLPMRLLEKLMCLVNYTEMARVTGVPFS 517
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK Q+++VIPN+K G+ + YEGATV+E G+Y+ PIATLD
Sbjct: 518 YLLARGQQIKVISQLFRKCLQEDVVIPNMKSEGTNE-EYEGATVIEPVRGYYDVPIATLD 576
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL++ NL + TP+G+ FVK + +KGILP IL E
Sbjct: 577 FSSLYPSIMMAHNLCYTTLLSKNSIAAFNLSKDDYTLTPNGDYFVKEHKRKGILPTILHE 636
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
L++ARK+AK DLK DP K VL+GRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT+
Sbjct: 637 LISARKKAKVDLKNETDPFRKDVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSVTA 696
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MIE TK V+ ++TT GY+++A+VIYGDTDSVMV+FG +E MKLG EAA+Y+
Sbjct: 697 FGRVMIEETKNEVQSRYTTENGYDYDAQVIYGDTDSVMVKFGHQDIETCMKLGEEAANYV 756
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLI+KKRYAGLYWT PEKFDKMDTKGIETVRRDNC LV+N+
Sbjct: 757 SQKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTRPEKFDKMDTKGIETVRRDNCRLVQNV 816
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +R++ A ++VK TI+DLL NR+DLS LVITK +K +Y K AH+EL
Sbjct: 817 ITKVLEYILEERNVDKAERFVKQTIADLLQNRVDLSQLVITKAYSK--HEYAAKQAHIEL 874
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERM+KRD +AP +GDRV YVII ++ K YE+SEDP++VLEN++PID YYLENQ++
Sbjct: 875 AERMKKRDPGSAPTLGDRVAYVIINSS-STKNYEKSEDPLFVLENSLPIDVKYYLENQLA 933
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
PL+RIFEPIL + +K+LLSG HTR+I +S P + G+M+FAK+ C CK+ + ++
Sbjct: 934 NPLMRIFEPILGERKAKDLLSGAHTRTIKMSAPKSGGLMRFAKKAELCKNCKSPLKSSNH 993
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G LC +C +LY ++Q+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY R
Sbjct: 994 GALCENCISMAPKLYGGAIAQMNYLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFYMR 1053
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KKAQKD+ + +L++WN
Sbjct: 1054 KKAQKDVMQQAAELEKWN 1071
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/335 (42%), Positives = 189/335 (56%), Gaps = 26/335 (7%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KWARP L + + + ++FQQLD + V +SG I R FGVT EG+SV
Sbjct: 73 KWARPDLPDSFDPEQEDVIFQQLDAEEV-----------NSGDHTIARFFGVTAEGYSVL 121
Query: 134 CKVHGFEPYFYISCPQGMGPD-DISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIM 192
C V GF YFYI P+G D + F L V +E+ K SI
Sbjct: 122 CNVTGFRHYFYIPVPRGFMQDRHLDQFKSYLSANY----------MGVLDVEIANKESIW 171
Query: 193 YYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y Q PF +I V + R +RG IQ + L ++Y+ N+ + LR M+DC
Sbjct: 172 GYNQNVKTPFFRIFVDNSRNITRLRSSFERGEIQFENLFPSQNVSYD-NINYLLRLMVDC 230
Query: 252 NIVGGNWIEVPVGKYRKTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
I G +WI +P G Y L S CQ+E Y +IS EGE+ KMAP RILSFDI
Sbjct: 231 KITGMSWITLPKGTYEMCQPHLKSSRCQIECSVDYRQLISHPSEGEWLKMAPLRILSFDI 290
Query: 310 ECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
EC+GRKG FPE HDPVIQ+AN+V+ GE++PFIRNV T+ +CA I+G ++ +TE +
Sbjct: 291 ECSGRKGIFPEAQHDPVIQIANVVSKYGEQRPFIRNVFTVNTCASIIGSQILEHKTEEQM 350
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
LL WR FI E DPDV+IGYN FDLPYL+++ +
Sbjct: 351 LLHWRQFIEESDPDVIIGYNTTNFDLPYLLDRANA 385
>gi|324120736|dbj|BAJ78759.1| DNA polymerase delta catalytic subunit [Cryptotympana facialis]
Length = 1102
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/607 (63%), Positives = 482/607 (79%), Gaps = 7/607 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH+II+DLQNG+ +TRRRLAVYCLKDAYLP RLLDKLM I NY+EM+RVTGV +
Sbjct: 485 QKEDVHHTIITDLQNGDDQTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMSRVTGVSLL 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKAK+KN V+P GS++ YEGATV+E G+Y+ PIATLD
Sbjct: 545 SLLTRGQQIKVVSQLLRKAKEKNYVMPTYG-VGSQEDQYEGATVIEPIKGYYKVPIATLD 603
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIM+A+NLCY+TL+ +L L P+ ++TP+ FVKS+L+KG+LPEILE+
Sbjct: 604 FSSLYPSIMIAHNLCYTTLLQGNARERLALTPDQFSRTPANYFFVKSSLRKGLLPEILED 663
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARKRAK DLK DP +K VLDGRQLALKISANSVYGFTGA VG+LPC+EISSSVTS
Sbjct: 664 LLNARKRAKLDLKNETDPFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISSSVTS 723
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE + GY+H+A V+YGDTDSVMV+FGV T+E AM+LGREAA+ +
Sbjct: 724 YGRTMIEQTKQEVEQHYCIANGYQHDAVVVYGDTDSVMVKFGVTTLEEAMELGREAAEVV 783
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ FIKPIKLEFEKVY+PYLLISKKRYAGLY+T P+K+DKMD KG+ETVRRDN LV N+
Sbjct: 784 TTKFIKPIKLEFEKVYFPYLLISKKRYAGLYFTRPDKYDKMDCKGLETVRRDNSPLVANM 843
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L++++ AV+Y K ISDLL NR+D+S LVITK L K+ DY K AHVEL
Sbjct: 844 MNTCLQKLLIEQNPDDAVEYAKEVISDLLCNRIDISQLVITKELAKS--DYAAKQAHVEL 901
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD TAP +GDRVPYVII A+KG AY+++EDPIYVLENNIPID +YYLENQ+S
Sbjct: 902 ANKMKKRDPGTAPKLGDRVPYVIIAASKGTPAYQKAEDPIYVLENNIPIDANYYLENQLS 961
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN--- 935
KPL+RIF PIL + ++ LL GDHTR+ ++ T + KF + SC+GCK+++ +
Sbjct: 962 KPLVRIFSPILGDKAESILLRGDHTRTRAVVTSRVGALSKFTSVKFSCLGCKSVLPDKQT 1021
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LC+HC+ A+LY + + + +ELE F RLWT+CQ CQGSLH++VLC+SRDCPIFY R
Sbjct: 1022 SALCNHCQPNVAQLYQEELDKYEELESKFCRLWTECQRCQGSLHEEVLCSSRDCPIFYMR 1081
Query: 996 KKAQKDM 1002
KK Q D+
Sbjct: 1082 KKVQMDL 1088
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 204/342 (59%), Gaps = 16/342 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW RP S+ ++FQQ+DID+ G + I+R++G+T EG+SVC
Sbjct: 70 KWLRPTPPVLEPSK-DKLVFQQIDIDHYTGSPLAGMPGSQIPPVPIMRMYGITMEGNSVC 128
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C VHGF PYF++ P D F L + R ++ + + V +EMV K ++
Sbjct: 129 CHVHGFSPYFFVLAPASFKSQDCKPFKDSLNRAVLNDMRGNRDNLQEAVLMVEMVHKTNM 188
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDR-GIQLDGLGMKSFMTYESNVLFALRFMID 250
Y + FLKI +ALP ++A + +L++ GI + F +E+N+ F +RFM+D
Sbjct: 189 YGYHGENESLFLKITMALPRLIAPAKRLLEKEGIYPENPSY-CFKAFEANIDFDIRFMVD 247
Query: 251 CNIVGGNWIEVPVGKYR--------KTAKTLSY---CQLEFDCLYSDIISRHPEGEFSKM 299
+ G WIE+P GK++ T +L Y CQ E D Y+ +I+ PEGE+SK+
Sbjct: 248 THTTGCCWIELPEGKWQLRRQSNQPGTTSSLLYTSRCQFEVDVAYNSLIAHEPEGEWSKV 307
Query: 300 APFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVD 359
PFRILSFDIECAGRKG FPEP HDPVIQ+AN+V QG PFIRNV TL +CAPIVG
Sbjct: 308 VPFRILSFDIECAGRKGIFPEPEHDPVIQIANMVINQGNADPFIRNVFTLNTCAPIVGCQ 367
Query: 360 VMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V+S + E D+L W FIREVDPD++ GYNI FD PYLI +
Sbjct: 368 VISSDNEADMLEKWAAFIREVDPDILTGYNINNFDFPYLINR 409
>gi|241993500|ref|XP_002399458.1| DNA polymerase delta catalytic subunit, putative [Ixodes scapularis]
gi|215492989|gb|EEC02630.1| DNA polymerase delta catalytic subunit, putative [Ixodes scapularis]
Length = 1018
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/619 (61%), Positives = 483/619 (78%), Gaps = 8/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNG +TRRRLAVYCLKDA LP RLLDKLM + NY+EMARVTGVP++
Sbjct: 401 QKEDVQHSIITDLQNGTDQTRRRLAVYCLKDAMLPLRLLDKLMSVINYMEMARVTGVPLT 460
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQLLRKA +++LV+P V E + GATV+E GFY PIATLD
Sbjct: 461 YLLSRGQQIKVVSQLLRKAAEQDLVMPTVHSEAGED--FTGATVIEPAKGFYSVPIATLD 518
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+T++ + ++ L + +TPSG+ FVK++++KG+LPEILE+
Sbjct: 519 FSSLYPSIMMAHNLCYTTVL--DSKQREALRADEFIRTPSGDHFVKASVRKGLLPEILED 576
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AK DLK DP K VLDGRQLALKISANSVYGFTGA VG+LPC+ IS SVT+
Sbjct: 577 LLAARKKAKTDLKNESDPFRKKVLDGRQLALKISANSVYGFTGAQVGKLPCLAISQSVTA 636
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MIE TK+ VE+++T GY +A+VIYGDTDSVM++FGV ++E AM+LGREAA+++
Sbjct: 637 FGRMMIEQTKREVEERYTRANGYPADAKVIYGDTDSVMIRFGVDSLEKAMELGREAANFV 696
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ F++PI LEFEKVY+PYLLI+KKRYAGL +T P+ DKMD KGIETVRRDNC LV NL
Sbjct: 697 TEKFVRPINLEFEKVYFPYLLINKKRYAGLLYTRPDAHDKMDCKGIETVRRDNCPLVANL 756
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL KIL++RD GAV + K TI+DLL NR+D+S LVITK LTK +Y K AHVEL
Sbjct: 757 INTCLEKILIERDPDGAVAFAKQTIADLLCNRVDISQLVITKELTKNDGEYAAKQAHVEL 816
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A RMRKRDA +APN+GDRVPYVI+ A+KG AY +SEDPIYVLENN+PIDT YYL+NQ+S
Sbjct: 817 ANRMRKRDAGSAPNLGDRVPYVIVAASKGTAAYLKSEDPIYVLENNVPIDTQYYLDNQLS 876
Query: 880 KPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
KPLLRIFEPIL + E LL GDHTR+ ++ + F +++ +CIGC+A++ +
Sbjct: 877 KPLLRIFEPILGESLAESVLLRGDHTRTKTVVHSKVGPLAAFTRKKNTCIGCRAVLEDQE 936
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C CK RE E+Y ++ + LE F +LWTQCQ C GSLH++VLCTSRDCPIFY R
Sbjct: 937 SAVCHGCKLREPEIYFVEINHLNSLESRFSQLWTQCQRCSGSLHEEVLCTSRDCPIFYMR 996
Query: 996 KKAQKDMAEAKLQLDRWNF 1014
KK QKD+A+ +L + R+
Sbjct: 997 KKVQKDLADQELVVRRFGL 1015
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/317 (44%), Positives = 204/317 (64%), Gaps = 4/317 (1%)
Query: 89 QSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCP 148
+S+ FQQ+D+D+ +G + + +G+ I+R+FGVT GHSV C VHGF PYFY+ P
Sbjct: 9 ESLEFQQIDLDHYLGRPLDCMPGMRTGTVPIVRMFGVTDGGHSVLCHVHGFLPYFYVEAP 68
Query: 149 QGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIV 206
G + F L + R++K + V I++V K+SI Y + PFLKI
Sbjct: 69 AGFKKEHCRAFKDALNRAVLADMRSNKMNLTDAVAAIDLVMKQSIYGYNSKGKTPFLKIT 128
Query: 207 VALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGK 265
+ LP ++A + +L+ G + + G + +E+NV F +RFM+D ++VG +WIE+P G
Sbjct: 129 MVLPRLIAPAKRLLETGTVSVPPYGAPCYRVFETNVDFEIRFMVDASVVGCSWIELPKGT 188
Query: 266 YR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHD 324
YR + + +S QLE D + +++ PEG+++++AP RILSFDIECAGRKG FP P D
Sbjct: 189 YRVRESTKVSRVQLEVDVAWDSLVAHAPEGKWARVAPLRILSFDIECAGRKGIFPVPEKD 248
Query: 325 PVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDV 384
VIQ+AN+V QGE+ PFIRNV TL +C PI G +V+ F+ E ++L W DF+R+VDPDV
Sbjct: 249 SVIQIANMVVRQGERDPFIRNVFTLNTCTPIAGCEVLCFKREGELLQKWADFVRDVDPDV 308
Query: 385 MIGYNICKFDLPYLIEK 401
+ GYNI FD PYLI +
Sbjct: 309 ITGYNIQNFDFPYLINR 325
>gi|195377844|ref|XP_002047697.1| GJ11779 [Drosophila virilis]
gi|194154855|gb|EDW70039.1| GJ11779 [Drosophila virilis]
Length = 1092
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/620 (62%), Positives = 482/620 (77%), Gaps = 8/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLA+YCLKDAYLP RLL KLM I NY+EMARVTGVP+
Sbjct: 473 QKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLGKLMAIVNYMEMARVTGVPLE 532
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKVLSQLLRKAK K ++P+ +GS++ YEGATV+E + G+Y PI+TLD
Sbjct: 533 SLLTRGQQIKVLSQLLRKAKTKGFIMPSYTSSGSDE-QYEGATVIEPKRGYYADPISTLD 591
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMA+NLCY+TL+ P K+ L + V +TP+ FVK+ L++G+LPEILE
Sbjct: 592 FASLYPSIMMAHNLCYTTLLLPGTKDKMGLTDDQVERTPANNVFVKAELRRGLLPEILES 651
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRAK DLK DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 652 LLAARKRAKNDLKVETDPFKRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 711
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK VE +T GYE++A VIYGDTDSVMV FGV T+E +M+LGREAAD +
Sbjct: 712 YGRTMIELTKNEVESHYTRANGYENDAVVIYGDTDSVMVNFGVKTLERSMELGREAADLV 771
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F++PIKLEFEKVYYPYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDN LV NL
Sbjct: 772 SSKFVRPIKLEFEKVYYPYLLINKKRYAGLYFTKPDKYDKMDCKGIETVRRDNSPLVANL 831
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L++RD GAV Y K I+DLL NR+D+S LVITK L KT DY K AHVEL
Sbjct: 832 MNACLQKLLIERDPDGAVDYAKQVIADLLCNRIDISQLVITKELAKT--DYAAKQAHVEL 889
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRDA TAP +GDRVPYVI AAK AY+++EDP+YVLEN++PID +YYLE Q+S
Sbjct: 890 AAKMKKRDAGTAPKLGDRVPYVICAAAKNTPAYQKAEDPLYVLENSVPIDANYYLEQQLS 949
Query: 880 KPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
KPLLRIFEPIL + A LL G+HTR+ ++ T G+ F ++ SC+GCK+L+ G
Sbjct: 950 KPLLRIFEPILGDKAESVLLKGEHTRTRTVVTSKVGGLAGFMTKKTSCLGCKSLMPKGYE 1009
Query: 937 --TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+LC HC+ + +ELY K ++ + LE F RLWT+CQ CQGSLH++V+C +RDCPIFY
Sbjct: 1010 QASLCPHCEPKMSELYQKELASKRGLEETFARLWTECQRCQGSLHEEVICCNRDCPIFYM 1069
Query: 995 RKKAQKDMAEAKLQLDRWNF 1014
R+K + ++ + ++ R+
Sbjct: 1070 RQKVRLELDTQQKRVLRFGL 1089
Score = 306 bits (783), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 221/358 (61%), Gaps = 13/358 (3%)
Query: 52 EDEESLILRDIEQRQDFASRLAKWAR-PPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL 110
E ++S +L + + Q + R W+R PP + C ++FQQLD++ +G + +
Sbjct: 45 ELDQSQLLGEGPENQQTSER---WSRAPPPKLDPATDC--LIFQQLDVENYVGQALPGMP 99
Query: 111 PLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA 170
G ++R+FGVT EG+SVCC VHG+ PYFYI+ P+ S H+ L+ ++
Sbjct: 100 GAQLGPVPVVRMFGVTMEGNSVCCHVHGYCPYFYITAPRDFEQRHCSELHEALDKKVIAD 159
Query: 171 NRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDG 228
R +K V + V +E+VQ+ +I YQ Q ++KI V +P VA+ +L + + +
Sbjct: 160 MRGNKDNVQEAVLAVELVQRLNIHGYQGDDKQTYIKITVTMPRFVAAASRLLKKEVIMSN 219
Query: 229 LGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR-----KTAKTLSYCQLEFDCL 283
+ +E+N+ F +RFM+D ++VG NWI++P G +R T S CQ+E D
Sbjct: 220 FDFQDCRAFENNIDFDIRFMVDTHVVGCNWIDLPPGVWRLRGHNSKPATESRCQIEVDVA 279
Query: 284 YSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFI 343
Y IS PEGE+SK+AP RILSFDIECAGRKG FPE DPVIQ+AN+V QGE +PFI
Sbjct: 280 YDQFISHEPEGEWSKVAPLRILSFDIECAGRKGIFPEAKMDPVIQIANMVIRQGESEPFI 339
Query: 344 RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
RNV TLK CAPI+G V+S++ E +L W F+REVDPD++ GYNI FD+PYL+ +
Sbjct: 340 RNVFTLKQCAPIIGSQVLSYDQETQLLDKWSAFVREVDPDILTGYNINNFDIPYLLNR 397
>gi|146421489|ref|XP_001486690.1| hypothetical protein PGUG_00067 [Meyerozyma guilliermondii ATCC 6260]
Length = 1075
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/618 (61%), Positives = 484/618 (78%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H+IISDLQNG ETRRRLAVYCLKDAYLP RLL+KLM + NY EMARVTGVP S
Sbjct: 458 QKEDVQHTIISDLQNGTRETRRRLAVYCLKDAYLPMRLLEKLMCLVNYTEMARVTGVPFS 517
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK Q+++VIPN+K G+ + YEGATV+E G+Y+ PIATLD
Sbjct: 518 YLLARGQQIKVISQLFRKCLQEDVVIPNMKSEGTNE-EYEGATVIEPVRGYYDVPIATLD 576
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL++ NL + TP+G+ FVK + +KGILP IL E
Sbjct: 577 FSSLYPSIMMAHNLCYTTLLSKNSIAAFNLSKDDYTLTPNGDYFVKEHKRKGILPTILHE 636
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
L++ARK+AK DLK DP K VL+GRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT+
Sbjct: 637 LISARKKAKVDLKNETDPFRKDVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSVTA 696
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MIE TK V+ ++TT GY+++A+VIYGDTDSVMV+FG +E MKLG EAA+Y+
Sbjct: 697 FGRVMIEETKNEVQSRYTTENGYDYDAQVIYGDTDSVMVKFGHQDIETCMKLGEEAANYV 756
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLI+KKRYAGLYWT PEKFDKMDTKGIETVRRDNC LV+N+
Sbjct: 757 SQKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTRPEKFDKMDTKGIETVRRDNCRLVQNV 816
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +R++ A ++VK TI+DLL NR+DLS LVITK +K +Y K AH+EL
Sbjct: 817 ITKVLEYILEERNVDKAERFVKQTIADLLQNRVDLSQLVITKAYSK--HEYAAKQAHIEL 874
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERM+KRD +AP +GDRV YVII ++ K YE+SEDP++VLEN++PID YYLENQ++
Sbjct: 875 AERMKKRDPGSAPTLGDRVAYVIINSS-STKNYEKSEDPLFVLENSLPIDVKYYLENQLA 933
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
PL+RIFEPIL + +K+LLSG HTR+I +S P + G+M+FAK+ C CK+ + ++
Sbjct: 934 NPLMRIFEPILGERKAKDLLSGAHTRTIKMSAPKSGGLMRFAKKAELCKNCKSPLKSSNH 993
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G LC +C +LY ++Q+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY R
Sbjct: 994 GALCENCISMAPKLYGGAIAQMNYLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFYMR 1053
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KKAQKD+ + +L++WN
Sbjct: 1054 KKAQKDVMQQAAELEKWN 1071
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 144/335 (42%), Positives = 188/335 (56%), Gaps = 26/335 (7%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KWARP L + + + ++FQQLD + V +SG I R FGVT EG+SV
Sbjct: 73 KWARPDLPDSFDPEQEDVIFQQLDAEEV-----------NSGDHTIARFFGVTAEGYSVL 121
Query: 134 CKVHGFEPYFYISCPQGMGPD-DISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIM 192
C V GF YFYI P+G D + F L V +E+ K SI
Sbjct: 122 CNVTGFRHYFYIPVPRGFMQDRHLDQFKLYLSANY----------MGVLDVEIANKESIW 171
Query: 193 YYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y Q PF +I V + R +RG IQ + L ++Y+ N+ + LR M+DC
Sbjct: 172 GYNQNVKTPFFRIFVDNSRNITRLRSSFERGEIQFENLFPSQNVSYD-NINYLLRLMVDC 230
Query: 252 NIVGGNWIEVPVGKYRKTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
I G +WI +P G Y L S CQ+E Y +IS EGE+ KMAP RILSFDI
Sbjct: 231 KITGMSWITLPKGTYEMCQPHLKSSRCQIECSVDYRQLISHPSEGEWLKMAPLRILSFDI 290
Query: 310 ECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
EC+GRKG FPE HDPVIQ+AN+V GE++PFIRNV T+ +CA I+G ++ +TE +
Sbjct: 291 ECSGRKGIFPEAQHDPVIQIANVVLKYGEQRPFIRNVFTVNTCASIIGSQILEHKTEEQM 350
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
LL WR FI E DPDV+IGYN FDLPYL+++ +
Sbjct: 351 LLHWRQFIEESDPDVIIGYNTTNFDLPYLLDRANA 385
>gi|170067371|ref|XP_001868453.1| DNA polymerase delta catalytic subunit [Culex quinquefasciatus]
gi|167863529|gb|EDS26912.1| DNA polymerase delta catalytic subunit [Culex quinquefasciatus]
Length = 1100
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/619 (62%), Positives = 487/619 (78%), Gaps = 9/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQN N +TRRRLA+YCLKDAYLP RLL+KLM I NY+EMARVTGVP+
Sbjct: 480 QKEDVHHSIITDLQNENEQTRRRLAMYCLKDAYLPLRLLNKLMCIVNYMEMARVTGVPLQ 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK ++ +IP+ + +GS++ YEGATV+E + G+Y PI+TLD
Sbjct: 540 CLLTRGQQIKVMSQLLRKTRKCGYLIPSYQSSGSDE-QYEGATVIEPKRGYYADPISTLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPE-DARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+NLCY+TL+ P + KL L + + +TP+ TFVK++++KGILPEILE
Sbjct: 599 FASLYPSIMMAHNLCYTTLLQPGFNKEKLGLTDDQITRTPANNTFVKASVRKGILPEILE 658
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL ARKRAKADLK DP +++VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 659 SLLGARKRAKADLKVETDPFKRSVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVT 718
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MIE TK+ VE ++T GYE++A VIYGDTDSVMV FGV ++E +M+LGREAA++
Sbjct: 719 AYGRTMIEQTKQEVEQRYTAENGYENDAVVIYGDTDSVMVNFGVKSLERSMELGREAAEF 778
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVYYPYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDN LV N
Sbjct: 779 VSAKFVKPIKLEFEKVYYPYLLINKKRYAGLYFTRPDKYDKMDCKGIETVRRDNSPLVAN 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L++R+ GAV++ K I+DLL NR+D+S LVITK L KT DY K AHVE
Sbjct: 839 MMNSCLQKLLIERNPEGAVEHAKQVIADLLCNRIDISQLVITKELAKT--DYAAKQAHVE 896
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA +M+KRDA +AP +GDRVPYVII AAK AY ++EDPIYVLEN +PID +YYLENQ+
Sbjct: 897 LAAKMKKRDAGSAPKLGDRVPYVIINAAKNTPAYMKAEDPIYVLENCVPIDANYYLENQL 956
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG- 936
SKPLLRIFEPIL + A LL GDHTR+ ++ T + F K++ +C+GCKAL+ G
Sbjct: 957 SKPLLRIFEPILGEKAESILLRGDHTRTRAVVTSKVGALAAFTKKRDACLGCKALLPVGY 1016
Query: 937 ---TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
+C HCK EA LY +S + LE F RLWTQCQ CQGSLH++V+CTSRDCPIFY
Sbjct: 1017 EGQAVCQHCKQNEAALYQNELSAQRSLEDRFCRLWTQCQRCQGSLHEEVICTSRDCPIFY 1076
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
R K + ++ + ++ R+
Sbjct: 1077 MRTKIRMELDTQEKRVRRF 1095
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 168/406 (41%), Positives = 255/406 (62%), Gaps = 10/406 (2%)
Query: 7 SARKRPPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDE--ESLILRDIEQ 64
+ +++P P + P T DDE E F E +DE + I Q
Sbjct: 2 NTKRKPFTKPGGESSSASFNKKPRTGGDDDEEDFESYFEAELANMDDEGDAAAAAHSIGQ 61
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
+ + AKW+RP Y + + ++FQQ+DID+ IG + G ++R+FG
Sbjct: 62 GPEAENTCAKWSRPK-PREYNPEAEGLVFQQIDIDHYIGQPVPGMPGAQIGPVPVMRMFG 120
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRH 182
+T+EG+SVC VHGF PY Y++ P+G G ++ F L+ + R++K V + V
Sbjct: 121 ITQEGNSVCAHVHGFTPYLYVAAPRGFGKSHLAEFRTALDKSVLNDMRSNKENVQEAVLD 180
Query: 183 IEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVL 242
+E+V+++SIM Y ++ F+++ VALP ++A+ + +L++ + + + YESN+
Sbjct: 181 VELVERQSIMGYNGEEKFSFIRVSVALPRLLAAVKRLLEKEQMMPSMDFQDCRVYESNID 240
Query: 243 FALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSY---CQLEFDCLYSDIISRHPEGEFS 297
F +RFM+D N+VG +WIE+P GK+R + K L+ CQ+E D Y++ I PEGE+S
Sbjct: 241 FDIRFMVDTNVVGCSWIEIPQGKWRIRRKGKGLALETRCQIEIDVAYNEFIVHDPEGEWS 300
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
K+APFRILSFDIECAGRKG FPEP HDPVIQ+AN+V QG+++PF+RNV TLKSCAPIVG
Sbjct: 301 KVAPFRILSFDIECAGRKGIFPEPQHDPVIQIANMVIRQGDQEPFLRNVFTLKSCAPIVG 360
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
V+S+E+E+++L W F+RE+DPD++ GYNI FD+PYL+ + +
Sbjct: 361 SQVLSYESEQELLDKWASFVRELDPDILTGYNINNFDIPYLLNRAN 406
>gi|189207907|ref|XP_001940287.1| DNA polymerase delta catalytic subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976380|gb|EDU43006.1| DNA polymerase delta catalytic subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1115
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/626 (60%), Positives = 481/626 (76%), Gaps = 12/626 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L NG+ +RRRLAVYCLKDAYLPQRLLDKLM + NY EMARVTGVP +
Sbjct: 484 QKEDVHHSMITELFNGDCNSRRRLAVYCLKDAYLPQRLLDKLMCLVNYTEMARVTGVPFN 543
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++LSRGQ I+ +SQL RKA L+IP++ G YEGATV+E + G+Y P+ATLD
Sbjct: 544 YILSRGQQIRFISQLFRKALDHQLIIPDLPNQGDSNDQYEGATVIEPKRGYYRDPVATLD 603
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+T + + KL + E TP G+ F + +KG+L EILE
Sbjct: 604 FASLYPSIMQAHNLCYTTWLDKQTVEKLKMKKDEDYIVTPHGDMFCTAKTRKGLLTEILE 663
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
E+L+ARK+AK +L DP +KAVL+GRQLALK++ANSVYG TGAT G+LPC+ I+SS T
Sbjct: 664 EVLSARKKAKRELATETDPFKKAVLNGRQLALKVTANSVYGLTGATNGKLPCLAIASSTT 723
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMIE TK VE K+ GY H+AEVIYGDTDSVMV+FG +E AMKLG EAA Y
Sbjct: 724 SFGRQMIERTKAEVEAKYNIANGYTHDAEVIYGDTDSVMVKFGTSNLEEAMKLGEEAATY 783
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ F+KPIKLEFEKVY+PYLLI+KKRYAGLYWTNP K+DKMDTKGIETVRRDNC LV+
Sbjct: 784 VTSKFLKPIKLEFEKVYFPYLLINKKRYAGLYWTNPHKWDKMDTKGIETVRRDNCRLVQT 843
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD-----YEVK 813
++ L +L+D+D GA +VK TI+DLL N++D+S LVITK LTK D Y K
Sbjct: 844 VIETSLRMLLIDQDPEGAQAFVKETIADLLQNKVDMSNLVITKALTKQEDKDGKGGYANK 903
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
AHVELAERM+KRDA +AP +GDRV YV+I+AA GAK +E+SEDP+YVLENN+PIDT YY
Sbjct: 904 QAHVELAERMKKRDAGSAPALGDRVAYVMIRAATGAKNFEKSEDPLYVLENNLPIDTRYY 963
Query: 874 LENQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK-- 930
L+NQ++KPL RIFEPIL + + LL+GDHTRSI+++ P+ G+MKFAK+ +C+GCK
Sbjct: 964 LDNQLAKPLGRIFEPILGEKKAASLLTGDHTRSITVAAPTMGGLMKFAKKTSTCMGCKKP 1023
Query: 931 ---ALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSR 987
A +G +C +C+ R ELY KT+S+V ELEV F RLWTQCQ CQGS+H +V+C S+
Sbjct: 1024 LVAAHEKDGAVCENCRPRIGELYTKTLSKVSELEVRFSRLWTQCQRCQGSVHCEVICASK 1083
Query: 988 DCPIFYRRKKAQKDMAEAKLQLDRWN 1013
DCPIFY R KA+KD+ +A +L R++
Sbjct: 1084 DCPIFYMRMKARKDVQDAGKELVRFD 1109
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 216/371 (58%), Gaps = 40/371 (10%)
Query: 45 LDETL--LPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVI 102
+ETL + ED ES+ + E+ Q+ W RP + + ++ FQQ+D + +
Sbjct: 64 FEETLERMAEDVESVKKGNKEKDQE-------WHRPAIPEDFSEMTHNLTFQQIDAEEGV 116
Query: 103 GDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQI 162
+G A +++FGVT GHSV V GF+ YFY++ P +D +
Sbjct: 117 ----------LNGGRATVKLFGVTENGHSVLLHVTGFQHYFYVAAPIDFHKEDCEGYKLF 166
Query: 163 LEGR-MREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD 221
LEG + N++S V + ++M + +I+ +Q + P+LKI V P M+ R ++
Sbjct: 167 LEGECQKNFNQHSAV---IASVQMCMRENILRFQGNQKSPYLKITVCDPKMINRVRMMVQ 223
Query: 222 RG---------IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTA 270
+G + DG+ +T++ N+ + LRFMID ++ G W+E P KYR
Sbjct: 224 KGNANYKRLWPAREDGI-----LTFD-NIAYVLRFMIDTSVTGMCWVEAPASKYRMINPR 277
Query: 271 KTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVA 330
+ S CQ E Y D+I+ EGE++K+AP R+LSFDIECAGRKG FPE DPVIQ+A
Sbjct: 278 ERHSNCQFEAQVHYKDLIAHSSEGEWAKLAPLRVLSFDIECAGRKGIFPEANVDPVIQIA 337
Query: 331 NLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNI 390
N+VT GE++PF+RNV L + +PIV ++ S+++E ++L+ WRDF+ +VDPDV+IGYNI
Sbjct: 338 NVVTRYGEQKPFVRNVFCLDTVSPIVSTEIFSYQSEGEMLMKWRDFVEQVDPDVIIGYNI 397
Query: 391 CKFDLPYLIEK 401
FD PYL+++
Sbjct: 398 NNFDFPYLLDR 408
>gi|320586772|gb|EFW99435.1| DNA polymerase delta catalytic subunit [Grosmannia clavigera kw1407]
Length = 1105
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/622 (61%), Positives = 481/622 (77%), Gaps = 10/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E RRRLA+YCLKDAYLPQRL+DKL + NY EMARVTGVP +
Sbjct: 481 QKEDVHHTMITELFNGTPENRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA + LV+PNV+ GSE+ YEGATV+E GFY+ P+ATLD
Sbjct: 541 FLLSRGQQVKFISQLFRKAMDQKLVVPNVQPKGSEE-QYEGATVIEPVRGFYKVPVATLD 599
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TLV L + TP+ + FV + +KG+L +ILE
Sbjct: 600 FASLYPSIMQAHNLCYTTLVNNAAIEAFGLKKDVDYIVTPNKDKFVTTKQRKGLLAQILE 659
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARK+A+ +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+ S T
Sbjct: 660 ELLAARKQARRELAMETDPFKKAVLNGRQLALKISANSVYGLTGATNGKLPCLEIARSTT 719
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE T+ VE +++ GY HNA+VIYGDTDSVMV+FG + AMKLG +AA +
Sbjct: 720 SYGRQMIEQTRNEVEQRYSVANGYSHNAQVIYGDTDSVMVKFGTKDLTEAMKLGEDAAQF 779
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F KPIKLEFEKVYYPYLLI+KKRYAGLYWT PE +DKMDTKGIETVRRDNCLLV+
Sbjct: 780 VSSKFAKPIKLEFEKVYYPYLLINKKRYAGLYWTKPEAYDKMDTKGIETVRRDNCLLVQT 839
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L ILVD+D GA YVK TI+DLL N++D+S LVITK LTK + Y K AHVE
Sbjct: 840 VIDKVLRMILVDQDEVGAQAYVKDTIADLLQNKVDMSKLVITKALTK--ESYTAKQAHVE 897
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRDA +AP +GDRV YV++K A G+K +ERSEDPIYVLE+N+PIDT YYL+NQ+
Sbjct: 898 LAERMKKRDAGSAPGLGDRVAYVMVKGAAGSKNFERSEDPIYVLEHNVPIDTKYYLDNQL 957
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-- 935
+KPL RIFEPIL + ++ LL+GDHTR+IS++ P+ G+MKFAK+ +C+ CK ++
Sbjct: 958 AKPLGRIFEPILGETKARSLLTGDHTRAISVAAPTIGGLMKFAKKTQTCMACKKPLTGKE 1017
Query: 936 ---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +CS R ELY KT+ +V +LE+ FGRLWTQCQ CQGS+H +V+C+S+DCPIF
Sbjct: 1018 ESLGAVCSDDAPRVGELYQKTLDKVSDLEIRFGRLWTQCQRCQGSMHCEVICSSKDCPIF 1077
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y R KA+KD+ +A L R++F
Sbjct: 1078 YMRMKAKKDLEDANKDLRRFDF 1099
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/412 (35%), Positives = 217/412 (52%), Gaps = 48/412 (11%)
Query: 5 NGSARKR----PPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILR 60
+ S +KR P TP + +PN Q + I F ES +L
Sbjct: 27 SASVKKRRLELPSSTPSKRFPNSQIGGRLNSSQIKSTF----------------ESEVLE 70
Query: 61 DIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSG 115
+ Q +Q+ + R W RP L + S++FQQ++ + G
Sbjct: 71 KLSQDISDLKQNNSERDQSWDRPSLPDTFSHNVDSLVFQQIEAEE----------GTMHG 120
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
+++FGVT G+SV V F Y Y++ P P D F LE ++ ++N+
Sbjct: 121 GRTTVKLFGVTERGNSVVLHVTDFRHYLYVAAPSSFVPSDCQAFRAYLETQL-AMHQNA- 178
Query: 176 VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD-RGIQLDGLGMKS- 233
+ ++M + SI+ +Q PFLKI V P ++ R +++ R GL +S
Sbjct: 179 ----IHSVQMTMRESILGFQNNTQNPFLKITVTDPKHISRVRSLIEGRKANWKGLWGQSE 234
Query: 234 --FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIIS 289
MTY+ N+ + +RFM+D +I G +W+E P GKY+ + S CQ+E + D+I+
Sbjct: 235 NQIMTYD-NLQYVMRFMVDSDIFGMSWVEAPAGKYQLVPEQHRQSNCQIEAEVSCIDLIA 293
Query: 290 RHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTL 349
P G +SKMAP RILSFDIECAGRKG FPE HDPVIQ+AN+VT GEK+PF+RNV L
Sbjct: 294 HKPVGTWSKMAPLRILSFDIECAGRKGIFPEAEHDPVIQIANVVTRYGEKKPFVRNVFCL 353
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ IV +++ FE E +L WR+F+ +DPD++ GYNI FD PYL+++
Sbjct: 354 DKTSSIVATEILEFEREEKMLTDWRNFLLRIDPDIITGYNISNFDFPYLLDR 405
>gi|324120700|dbj|BAJ78741.1| DNA polymerase delta catalytic subunit [Ephemera japonica]
Length = 1006
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/618 (62%), Positives = 473/618 (76%), Gaps = 9/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLAVYC+KDAYLP +LL+KLM I NY+EMARVTGV +
Sbjct: 384 QKEDVHHSIITDLQNGDDQTRRRLAVYCVKDAYLPLKLLEKLMCIINYMEMARVTGVSLL 443
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKAK+K+ VIP GS YEGATV+E + G+Y++PI TLD
Sbjct: 444 CLLTRGQQIKVISQLLRKAKEKDFVIPTYSVKGSNDEQYEGATVIEPKKGYYKQPIVTLD 503
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TLV +D +L L E TP+G+ FVK++++KG+LPEILE
Sbjct: 504 FSSLYPSIMMAHNLCYTTLVQNKD--RLKLSSEQYTITPNGDCFVKTSIRKGLLPEILES 561
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AK DLK+ DPL + VLDGRQLALKISANSVYGFTGA VG+LPC+ IS S T+
Sbjct: 562 LLSARKKAKEDLKKEMDPLRQKVLDGRQLALKISANSVYGFTGAQVGKLPCLAISGSTTA 621
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIEHTK VE KF GY H++ VIYGDTDSVM++FGV + AAM LGREAA+Y+
Sbjct: 622 YGRTMIEHTKTEVEQKFNMANGYAHDSVVIYGDTDSVMIKFGVEDLPAAMALGREAAEYV 681
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ FIKPIKLEFEKVY+PYLLI+KKRYAGLY+T PE +DKMD KGIETVRRDNC LV N+
Sbjct: 682 TSKFIKPIKLEFEKVYFPYLLINKKRYAGLYYTKPETYDKMDCKGIETVRRDNCPLVANM 741
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL +L+DRD GAVQ+ K ISDLL NR+D+S LVITK L K +DY+ K AHVEL
Sbjct: 742 MNTCLRMLLIDRDPDGAVQFAKDMISDLLCNRLDISQLVITKELAK--EDYKAKQAHVEL 799
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AE+M+KRD TAP +GDRVPYVII A K AY++SEDPIYVLENN+ IDT YYL NQ++
Sbjct: 800 AEKMKKRDPGTAPKLGDRVPYVIIAAPKKTPAYQKSEDPIYVLENNVSIDTDYYLNNQLA 859
Query: 880 KPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT 937
KPLLRIF PIL + E LL G+HT S + +T + F R+ C+GC+ +SNG
Sbjct: 860 KPLLRIFSPILGDTKAEATLLQGEHTLSKTKTTSKVGALSAFTTRREVCLGCRTPLSNGN 919
Query: 938 ---LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+C HC +++ Y ++Q LE F RLWTQCQ CQGSLHQ+V+CTSRDCPIFY
Sbjct: 920 TGAVCQHCLPKQSAFYQVEAVKLQNLERSFSRLWTQCQRCQGSLHQEVICTSRDCPIFYM 979
Query: 995 RKKAQKDMAEAKLQLDRW 1012
RKK Q D+ + R+
Sbjct: 980 RKKVQMDLISQGKTMKRF 997
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 186/296 (62%), Gaps = 8/296 (2%)
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
SG ++R+FGVT G+SVC VHGF PYFY P F L + R+
Sbjct: 13 SGPVPVVRMFGVTDNGNSVCVHVHGFAPYFYTLVPSNFEEKHCGKFKDTLNKAVLADMRS 72
Query: 174 S--KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
+ ++ + V + +V++ +I Y+ PFL + VALP ++ C+ IL++ L LG
Sbjct: 73 NPHQLSEAVLEVRLVKRENIYGYRATGLIPFLMVTVALPDLLPKCKRILEQETILPELGP 132
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKT----LSYCQLEFDCLYS 285
+ + +E+N+ F +RFM + N++G +W+E+P G + R T +S CQ+E D Y
Sbjct: 133 QEYQCFETNIDFDIRFMTEVNMMGCSWVELPAGSWVPRGDVGTKLAPISRCQIEVDVAYD 192
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRN 345
II+ PEGE+ ++APFRILSFDIECAGRKG FPEP HDPVIQ+AN+V QG +P I+N
Sbjct: 193 RIIAHQPEGEWLRVAPFRILSFDIECAGRKGIFPEPQHDPVIQIANVVINQGSTEPIIKN 252
Query: 346 VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V TL CAPIVG V+S +TE +L W +F+REVDPD++ GYNI FDL Y++ +
Sbjct: 253 VFTLLDCAPIVGTQVLSNQTESALLENWANFVREVDPDIITGYNINNFDLYYMLSR 308
>gi|324120690|dbj|BAJ78736.1| DNA polymerase delta catalytic subunit [Nipponatelura sp. 66-1]
Length = 1006
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/639 (61%), Positives = 490/639 (76%), Gaps = 17/639 (2%)
Query: 388 YNICKFDLPYLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFN 446
Y + +L+E KEDVHHS+I+DLQNGN +TRRRLAVYCLKDAYLP RLL+KLM I N
Sbjct: 371 YTLNAVSYHFLLEQKEDVHHSVITDLQNGNPQTRRRLAVYCLKDAYLPLRLLEKLMCIIN 430
Query: 447 YVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEA 506
Y+EMARVTGVP+S LL+RGQ IKV+SQLLRKA++K+ VIP G ++ YEGATV+E
Sbjct: 431 YMEMARVTGVPLSCLLTRGQQIKVVSQLLRKAREKDFVIPTY-SVGVQEEQYEGATVIEP 489
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKS 566
+ G+Y PIATLDF+SLYPSIMMA+NLCY++L+ KL L P+ KTP+G FVK+
Sbjct: 490 KRGYYADPIATLDFSSLYPSIMMAHNLCYTSLLQGSVKDKLGLTPDQYTKTPAGNFFVKT 549
Query: 567 NLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG 626
+++KG+LPEILE LLAARK+AKADLK+ DPL + VLDGRQLALKISANSVYGFTGA VG
Sbjct: 550 SVRKGLLPEILENLLAARKKAKADLKDETDPLRRKVLDGRQLALKISANSVYGFTGAQVG 609
Query: 627 QLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVE 686
+LPC+EIS SVT+YGR MIE TK+ VE K+ G+ H+A VIYGDTDSVMV+FGV ++E
Sbjct: 610 KLPCLEISGSVTAYGRTMIEQTKQEVERKYCIANGFYHDAVVIYGDTDSVMVKFGVKSLE 669
Query: 687 AAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIE 746
AM LGREAA+Y+S FIKPIKLEFEKVY+PYLLI+KKRYAGLY+T + +DKMD KG+E
Sbjct: 670 KAMALGREAAEYVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYFTKADTYDKMDCKGLE 729
Query: 747 TVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKT 806
TVRRDNC LV N++ CL K+L+DRD GAV Y K I+DLL NR+D+S LVITK L K+
Sbjct: 730 TVRRDNCPLVANMMNTCLQKLLIDRDPDGAVSYAKQVIADLLCNRIDISQLVITKELAKS 789
Query: 807 GDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNI 866
DY + AHVELA +M+KRD TAP +GDRVPYV+I AAKG AY ++EDPIYVLEN+I
Sbjct: 790 --DYAARQAHVELANKMKKRDPGTAPKLGDRVPYVLISAAKGTPAYMKAEDPIYVLENSI 847
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQL 924
PID++YYLENQ+SKPLLRIF P+L + E LL G+HTR+ ++ T + F +++
Sbjct: 848 PIDSNYYLENQLSKPLLRIFSPVLGDNKAESILLRGEHTRTKAVVTSKVGALAAFTRKKE 907
Query: 925 SCIGCKALI-SNGTL--CSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD 981
+CIGCK+++ +G + C HC + +Y + ++ +LE F RLWTQCQ CQGS H++
Sbjct: 908 TCIGCKSVLPGDGAMAVCKHCMPNQVTIYKGELDKLCDLETRFARLWTQCQRCQGSRHEE 967
Query: 982 VLCTSRDCPIFYRRKKAQKDMA-EAKL-------QLDRW 1012
VLCTSRDCPIFY RKK D+ + K+ +LD W
Sbjct: 968 VLCTSRDCPIFYMRKKVLLDLGTQGKVIQRFGPPELDSW 1006
Score = 285 bits (729), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/295 (46%), Positives = 189/295 (64%), Gaps = 8/295 (2%)
Query: 115 GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANR-- 172
G I+R++G+T EGHSVCC VHGF PY +++ P F + L + + R
Sbjct: 14 GPVPIMRMYGITMEGHSVCCHVHGFTPYLFVTVPDTFQEKHCEPFKKALNKALLDDMRYG 73
Query: 173 NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK 232
K + +E+ K +I Y+ K PFLKI VAL VA+ + +L+R + LG
Sbjct: 74 KDKPSEAALAVELQLKENIYGYRGGKKVPFLKITVALHRFVAASKRLLEREVIFPELGAY 133
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR---KTAKTL---SYCQLEFDCLYSD 286
++ +ESN+ F +RFM+D +VG +W+E+ GK++ + TL S CQ+E D + +
Sbjct: 134 NYQAFESNIDFDIRFMVDTGVVGCSWVELLPGKWKIRSRNNPTLPLESRCQIEADVSWHE 193
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
+S PEGE++K+APFRILSFDIECAGRKG FPEP HDPVIQ+AN+V QG +PF+RNV
Sbjct: 194 FVSHPPEGEWAKVAPFRILSFDIECAGRKGIFPEPQHDPVIQIANMVIKQGSPEPFVRNV 253
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
TL +CAPI+G V SF E ++L W DF+REVDPD+ GYNI FDLPYL+ +
Sbjct: 254 FTLDTCAPIIGCQVHSFSKESELLEKWADFVREVDPDIFTGYNINNFDLPYLLNR 308
>gi|345483424|ref|XP_001602680.2| PREDICTED: DNA polymerase delta catalytic subunit-like [Nasonia
vitripennis]
Length = 1090
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/620 (61%), Positives = 487/620 (78%), Gaps = 8/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+++TRRRLAVYCLKDAYLP RLLDKLM I Y+EMARVTGV +S
Sbjct: 471 QKEDVHHSIITDLQNGDSQTRRRLAVYCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSLS 530
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK ++ +IP + GS++ +EGATV+E + G+Y PIATLD
Sbjct: 531 SLLTRGQQIKVVSQLLRKTIERGYLIPVHQGQGSDE-QFEGATVIEPKRGYYNDPIATLD 589
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSI+MA+N+CY+TL++P + +P V KTP FVKSN++KGILPEILE
Sbjct: 590 FSSLYPSIIMAHNICYTTLLSPAAQKAYEVPENDVTKTPVNSNFVKSNVRKGILPEILES 649
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK AKA+LK+ DPL++ VLDGRQ ALK+SANSVYGFTGA G+LPC+EIS SVT+
Sbjct: 650 LLSARKVAKAELKKETDPLKQKVLDGRQYALKVSANSVYGFTGAQQGKLPCLEISGSVTA 709
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MI+ TK VE ++ GYEH+AEVIYGDTDSVMV+FGV ++E AMKLG+EAA+Y+
Sbjct: 710 YGRTMIDKTKHEVEQQYRKENGYEHDAEVIYGDTDSVMVKFGVKSIEDAMKLGKEAAEYV 769
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ FIKPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV N+
Sbjct: 770 TSKFIKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNCPLVANM 829
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DR+ A+ Y K ISDLL NR+D+S LVITK LTKT DY K AHVEL
Sbjct: 830 MNTCLQKLLIDRNPEDAIDYAKQVISDLLCNRIDISQLVITKELTKT--DYTAKQAHVEL 887
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRDA TAP +GDR+PYV I KG AY+++EDPIYVLENNIPIDT+YYLENQ+S
Sbjct: 888 AAKMKKRDAGTAPKLGDRIPYVFISGPKGTPAYQKAEDPIYVLENNIPIDTNYYLENQLS 947
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
KPL+RIFEPIL + ++ LL G+HTR+ S++T ++ F +++ +C+GCKA++ NG
Sbjct: 948 KPLVRIFEPILGDKAESLLLKGEHTRTKSVATSKVGALVAFTRKKEACLGCKAVLPNGQE 1007
Query: 937 --TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LC +C+ +E E+ + ++LE F RLW +CQ CQGSLHQ+V+CTSRDCPIFY
Sbjct: 1008 EKALCQYCEKKEDEIIQTEIYNGRKLEEKFCRLWAECQRCQGSLHQEVICTSRDCPIFYM 1067
Query: 995 RKKAQKDMAEAKLQLDRWNF 1014
RKK Q D+ +++++
Sbjct: 1068 RKKVQIDLDTQAKRIEKFGL 1087
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 220/356 (61%), Gaps = 13/356 (3%)
Query: 54 EESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLS 113
EES + D ++++ + KW+RPP + S+ S+ FQQ+++D+ +
Sbjct: 45 EESQVFGDGPEQENTS---IKWSRPPPPALDPSK-DSLFFQQIEVDHYTDKPIPGMPGNR 100
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE--AN 171
GS +IR++GVT +G+SVCC VHGF PYF++S P F L ++ +
Sbjct: 101 VGSVPVIRMYGVTEQGNSVCCHVHGFSPYFFVSAPSNFTDAHCRPFKTALNNAVKNDIKS 160
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
+ + +F+ +++V+++++ Y K FLKI VALP ++A + +L+ + D L
Sbjct: 161 NSENIQEFILAVDIVKRQTVYGYTGDKKSLFLKITVALPRLIAPSKRLLETNVIYDVLP- 219
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPV------GKYRKTAKTLSYCQLEFDCLYS 285
++ +ESN+ F +RFM D ++VG +WIE+ GKY +S CQLE D +
Sbjct: 220 HTYTAFESNIDFDIRFMADTHMVGCSWIELKPNHWKLRGKYNHNLPLISRCQLEVDVAWD 279
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRN 345
+ I+ PEGE+SK+APFRILSFDIECAGRKG FPEP DPVIQ+AN+V LQGE +PF+RN
Sbjct: 280 EFIAHAPEGEWSKVAPFRILSFDIECAGRKGIFPEPNKDPVIQIANMVILQGESEPFLRN 339
Query: 346 VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ TL +CAPIVG V+S E +L W DFIR++DPD+ GYNI FD PYLI +
Sbjct: 340 IFTLDTCAPIVGCQVLSHNKESTMLEKWADFIRQLDPDIFTGYNINNFDFPYLINR 395
>gi|448103715|ref|XP_004200106.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
gi|359381528|emb|CCE81987.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
Length = 1079
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/618 (62%), Positives = 481/618 (77%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 462 QKEDVQHSIITDLQNGNRETRRRLAVYCLKDAYLPLRLMEKLMCLVNYTEMARVTGVPFS 521
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + N+VIPN+K G+ + YEGA V+E G+Y+ PIATLD
Sbjct: 522 YLLARGQQIKVISQLFRKCLEDNIVIPNMKSEGTNED-YEGAIVIEPVRGYYDVPIATLD 580
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + LNL + TP+G+ FVK + +KGILP IL+E
Sbjct: 581 FSSLYPSIMMAHNLCYTTLLNKQTINTLNLKEDDYTLTPNGDYFVKDHKRKGILPTILKE 640
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLK+ DP +K VL+GRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT+
Sbjct: 641 LLTARKKAKADLKKETDPFKKDVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSVTA 700
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK V++ ++ G+ +++VIYGDTDSVMV+FG +E MK G EAA+Y+
Sbjct: 701 FGREMIEKTKNEVQEHYSIKNGFPFDSQVIYGDTDSVMVRFGFNDLETCMKYGEEAANYV 760
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLI+KKRYAGLYWTNP+KFDKMDTKGIETVRRDNC LV+N+
Sbjct: 761 STKFKDPIKLEFEKVYFPYLLINKKRYAGLYWTNPQKFDKMDTKGIETVRRDNCRLVQNV 820
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +RD+ A YVK TI+DLL NR+DLS LVITK +K DY K AH+EL
Sbjct: 821 ITKVLEYILEERDVAKAEHYVKQTIADLLQNRIDLSQLVITKAYSK--HDYAAKQAHIEL 878
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERM+KRD +AP +GDRV YVII +A +K YE+SEDP+YVLE+++PID YYL+NQ+S
Sbjct: 879 AERMKKRDPGSAPTLGDRVAYVIINSA-SSKNYEKSEDPLYVLEHSLPIDVKYYLDNQLS 937
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
PL+RIFEPIL + +KELL+G HTR+I +S P G+MKFAK+ C CK+ + +
Sbjct: 938 NPLMRIFEPILGEKKAKELLAGSHTRTIKMSAPKTGGLMKFAKKAELCKNCKSPLKPTNK 997
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G LC +C +LY ++Q+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY R
Sbjct: 998 GALCENCLPMAPKLYGDALAQMNYLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFYMR 1057
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KKAQKD+A L +WN
Sbjct: 1058 KKAQKDVAAQAKDLHKWN 1075
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 142/331 (42%), Positives = 195/331 (58%), Gaps = 26/331 (7%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W RPPL + + + I FQQLD + + D LSS R FG+T EG+SV C
Sbjct: 78 WKRPPLPADFDASTTDITFQQLDAEESMIDG------LSSA-----RFFGITEEGYSVLC 126
Query: 135 KVHGFEPYFYISCPQGMGPDD-ISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
+V F YFY+ P+G D ++ F L+ Q V E+ K SI
Sbjct: 127 EVRNFLHYFYVPVPKGFFRDSHLTQFENYLKNNY----------QGVCKAEICLKESIWG 176
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCN 252
+ PFLKI V ++ RG +RG I+ + L +TY+ N+ + LR M+DC
Sbjct: 177 FNNNVKSPFLKIYVDNSKNISKIRGSFERGEIRFENLFPPQNVTYD-NINYLLRLMVDCK 235
Query: 253 IVGGNWIEVPVGKYRKTA--KTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIE 310
I G +W+ +P GKY + + +S CQLE Y DIIS P+GE+ K+AP R+LSFDIE
Sbjct: 236 ISGMSWLTLPKGKYGMISDFEKVSTCQLECFIDYRDIISHPPDGEWLKLAPLRVLSFDIE 295
Query: 311 CAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVL 370
C+GRKG FPE D VIQ+AN+V+ GE +PF+RNV T+ +CA I+G + ETE ++L
Sbjct: 296 CSGRKGIFPEADQDSVIQIANVVSKTGESKPFVRNVFTVNTCASIIGSQIFEHETEEEML 355
Query: 371 LAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ WRDFI +VDPD++IGYNI FDLPYLI++
Sbjct: 356 MHWRDFIVDVDPDIIIGYNIANFDLPYLIDR 386
>gi|350397573|ref|XP_003484918.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 2
[Bombus impatiens]
Length = 1104
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/619 (62%), Positives = 492/619 (79%), Gaps = 10/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGNA+TRRRLAVYCLKDAYLP RLLDKLM IF Y+EMARVTGV I
Sbjct: 485 QKEDVHHSIITDLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIFIYMEMARVTGVSIC 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIP-NVKQAGSEQGTYEGATVLEARAGFYEKPIATL 518
LL+RGQ IKV+SQLLRK ++K+ +IP + QA EQ +EGATV+E + G+Y PIATL
Sbjct: 545 SLLTRGQQIKVVSQLLRKTREKDYLIPVHRGQASDEQ--FEGATVIEPKRGYYSDPIATL 602
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DF+SLYPSI+MA+NLCY+TL+ + KL + + + TPS FVK+ L+KGILPEILE
Sbjct: 603 DFSSLYPSIIMAHNLCYTTLLKRDTEIKLKIDSDDITVTPSDSKFVKATLRKGILPEILE 662
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL+ARK AKA+LK+ DPL++ VLDGRQ ALK+SANSVYGFTGA +G+LPC++IS+SVT
Sbjct: 663 SLLSARKAAKAELKKETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLDISASVT 722
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MIE TK+ VE+++ GY+++A V+YGDTDSVM++FGV TVE AM+LGREAA+Y
Sbjct: 723 AYGRTMIERTKQEVEEQYCVSKGYKNDAVVVYGDTDSVMIKFGVKTVEEAMELGREAAEY 782
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV N
Sbjct: 783 VSSKFLKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DR+ A+ Y K ISDLL NR+D+S LV+TK LTKT DY K AHVE
Sbjct: 843 MMNTCLQKLLIDRNPNDALNYAKQIISDLLCNRIDISQLVVTKELTKT--DYAAKQAHVE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA +M+KRDA AP +GDRVPYV I+AAKG AY+++EDPIYVLENN+PIDT+YYLENQ+
Sbjct: 901 LAAKMKKRDAGNAPKLGDRVPYVFIRAAKGTPAYQKAEDPIYVLENNVPIDTNYYLENQL 960
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS--- 934
+KPL+RIFEPIL + A LL GDHTR+ S+ T + F +++ C+GCKA+++
Sbjct: 961 AKPLVRIFEPILGEKAESLLLKGDHTRTKSVVTSKVGALSAFTRKKEICLGCKAVLTPER 1020
Query: 935 -NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
LC +C+ +EAELY + ++LE F RLWT+CQ CQGSLHQ+VLCTSRDCPIFY
Sbjct: 1021 EKMALCKYCEPKEAELYQTELYLGRKLEEKFCRLWTECQRCQGSLHQEVLCTSRDCPIFY 1080
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
RKK Q ++ ++++R+
Sbjct: 1081 MRKKVQMELDTQMIRIERF 1099
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 234/397 (58%), Gaps = 23/397 (5%)
Query: 17 KESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWA 76
++ +P +A T ++DEF D ++E PE + S + +++ S KW+
Sbjct: 24 EDDYPGSFEAELATMDEMEDEFGDISQVMEEP--PEIQLSKAEKGGPAQENTYS---KWS 78
Query: 77 RPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGS----AAIIRIFGVTREGHSV 132
RPP Q +++FQQ++ID+ G LP GS I+R+FGVT G+SV
Sbjct: 79 RPP-PPELNPQKDALIFQQIEIDHYNGIP----LPGMPGSNIPPVPIMRMFGVTELGNSV 133
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS--KVPQFVRHIEMVQKRS 190
CC VHGF PY Y++ PQ F + L M + R++ + + V +E + K++
Sbjct: 134 CCHVHGFNPYLYVTAPQNFNEHHCRLFKEALNKAMLKDMRSNPENIQEAVLAVERLYKQN 193
Query: 191 IMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMID 250
+ Y + FLKI VALP +VA C+ +++ L + +ESN+ F +RFM+D
Sbjct: 194 MYGYTGNEKSLFLKITVALPRLVARCKKVVEEETILSEFN-HCYRAFESNIDFDIRFMVD 252
Query: 251 CNIVGGNWIEVPVGKYRKTAKT------LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
++VG +WIE+P ++ S CQLE D + I+ P+GE+SK+APFRI
Sbjct: 253 TSVVGCSWIELPPKTWKLRQHNGHNLPFTSRCQLEVDIAWDAFIAHAPQGEWSKIAPFRI 312
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP HDPVIQ+AN+V QGE +PF+RN+ TL +CAPIVG V+SFE
Sbjct: 313 LSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGEAEPFLRNIFTLDTCAPIVGCQVLSFE 372
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E+ +L W DF+R++DPD+ GYNI FD PYLI +
Sbjct: 373 KEQKMLEKWADFVRQLDPDIFTGYNINNFDFPYLINR 409
>gi|410982336|ref|XP_003997513.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 2 [Felis
catus]
Length = 1109
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/622 (62%), Positives = 483/622 (77%), Gaps = 10/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N +EMARVTGVP+
Sbjct: 483 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTGVPLG 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 543 YLLTRGQQVKVVSQLLRQAMREGLLMPVVKTEGVED--YTGATVIEPLKGYYDVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE
Sbjct: 601 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILEN 660
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 661 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 720
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 721 FGRQMIEKTKQLVESKYTVENGYGTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 780
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 781 SGHFPPPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 841 LVTASLRRLLIDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQAHVE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 901 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 960
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL---- 932
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR CIGC+ +
Sbjct: 961 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRHSCCIGCRTVXXXX 1020
Query: 933 -ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPI
Sbjct: 1021 XXXTGAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPI 1080
Query: 992 FYRRKKAQKDMAEAKLQLDRWN 1013
FY RKK +KD+ + + L R+
Sbjct: 1081 FYMRKKVRKDLEDQEQLLRRFG 1102
Score = 312 bits (799), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 211/335 (62%), Gaps = 8/335 (2%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIG--DSNRELLPLSSGSAAIIRIFGVTREGH 130
A+W RP S Q + ++FQQL+ID+ +G P GS ++R FGVT EG
Sbjct: 75 ARWLRPSPPS-LDPQTEPLIFQQLEIDHYVGLAQPLPGAAPPPPGSVPVLRAFGVTDEGV 133
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC +HGF PYFY P G G + + + L + R K V +E+ +
Sbjct: 134 SVCCHIHGFAPYFYTPAPPGFGREHLGDLQRELNAAISRDQRGGKELAGPAVLSVELCSR 193
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
S+ Y PFL+I +ALP ++A R +L++GI++ GLG SF YE+NV F +RFM
Sbjct: 194 ESMFGYHGHGPSPFLRITLALPRLLAPARRLLEQGIRVPGLGTPSFAPYETNVDFEIRFM 253
Query: 249 IDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILS 306
+D +IVG NW+E+P GKY R K ++CQLE D +SD++S PEGE+ ++AP R+LS
Sbjct: 254 VDTDIVGCNWLELPAGKYLLRLEGKA-THCQLEADVQWSDVVSHPPEGEWQRIAPLRVLS 312
Query: 307 FDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETE 366
FDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E
Sbjct: 313 FDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYERE 372
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 373 EELLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 407
>gi|350397570|ref|XP_003484917.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 1
[Bombus impatiens]
Length = 1090
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/619 (62%), Positives = 492/619 (79%), Gaps = 10/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGNA+TRRRLAVYCLKDAYLP RLLDKLM IF Y+EMARVTGV I
Sbjct: 471 QKEDVHHSIITDLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIFIYMEMARVTGVSIC 530
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIP-NVKQAGSEQGTYEGATVLEARAGFYEKPIATL 518
LL+RGQ IKV+SQLLRK ++K+ +IP + QA EQ +EGATV+E + G+Y PIATL
Sbjct: 531 SLLTRGQQIKVVSQLLRKTREKDYLIPVHRGQASDEQ--FEGATVIEPKRGYYSDPIATL 588
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DF+SLYPSI+MA+NLCY+TL+ + KL + + + TPS FVK+ L+KGILPEILE
Sbjct: 589 DFSSLYPSIIMAHNLCYTTLLKRDTEIKLKIDSDDITVTPSDSKFVKATLRKGILPEILE 648
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL+ARK AKA+LK+ DPL++ VLDGRQ ALK+SANSVYGFTGA +G+LPC++IS+SVT
Sbjct: 649 SLLSARKAAKAELKKETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLDISASVT 708
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MIE TK+ VE+++ GY+++A V+YGDTDSVM++FGV TVE AM+LGREAA+Y
Sbjct: 709 AYGRTMIERTKQEVEEQYCVSKGYKNDAVVVYGDTDSVMIKFGVKTVEEAMELGREAAEY 768
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV N
Sbjct: 769 VSSKFLKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNCPLVAN 828
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DR+ A+ Y K ISDLL NR+D+S LV+TK LTKT DY K AHVE
Sbjct: 829 MMNTCLQKLLIDRNPNDALNYAKQIISDLLCNRIDISQLVVTKELTKT--DYAAKQAHVE 886
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA +M+KRDA AP +GDRVPYV I+AAKG AY+++EDPIYVLENN+PIDT+YYLENQ+
Sbjct: 887 LAAKMKKRDAGNAPKLGDRVPYVFIRAAKGTPAYQKAEDPIYVLENNVPIDTNYYLENQL 946
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS--- 934
+KPL+RIFEPIL + A LL GDHTR+ S+ T + F +++ C+GCKA+++
Sbjct: 947 AKPLVRIFEPILGEKAESLLLKGDHTRTKSVVTSKVGALSAFTRKKEICLGCKAVLTPER 1006
Query: 935 -NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
LC +C+ +EAELY + ++LE F RLWT+CQ CQGSLHQ+VLCTSRDCPIFY
Sbjct: 1007 EKMALCKYCEPKEAELYQTELYLGRKLEEKFCRLWTECQRCQGSLHQEVLCTSRDCPIFY 1066
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
RKK Q ++ ++++R+
Sbjct: 1067 MRKKVQMELDTQMIRIERF 1085
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 229/397 (57%), Gaps = 35/397 (8%)
Query: 17 KESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWA 76
++ +P +A T ++DEF D ++E P E + +KW+
Sbjct: 22 EDDYPGSFEAELATMDEMEDEFGDISQVMEEG--PAQENTY---------------SKWS 64
Query: 77 RPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGS----AAIIRIFGVTREGHSV 132
RPP Q +++FQQ++ID+ G LP GS I+R+FGVT G+SV
Sbjct: 65 RPP-PPELNPQKDALIFQQIEIDHYNGIP----LPGMPGSNIPPVPIMRMFGVTELGNSV 119
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS--KVPQFVRHIEMVQKRS 190
CC VHGF PY Y++ PQ F + L M + R++ + + V +E + K++
Sbjct: 120 CCHVHGFNPYLYVTAPQNFNEHHCRLFKEALNKAMLKDMRSNPENIQEAVLAVERLYKQN 179
Query: 191 IMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMID 250
+ Y + FLKI VALP +VA C+ +++ L + +ESN+ F +RFM+D
Sbjct: 180 MYGYTGNEKSLFLKITVALPRLVARCKKVVEEETILSEFN-HCYRAFESNIDFDIRFMVD 238
Query: 251 CNIVGGNWIEVPVGKYRKTAKT------LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
++VG +WIE+P ++ S CQLE D + I+ P+GE+SK+APFRI
Sbjct: 239 TSVVGCSWIELPPKTWKLRQHNGHNLPFTSRCQLEVDIAWDAFIAHAPQGEWSKIAPFRI 298
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP HDPVIQ+AN+V QGE +PF+RN+ TL +CAPIVG V+SFE
Sbjct: 299 LSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGEAEPFLRNIFTLDTCAPIVGCQVLSFE 358
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E+ +L W DF+R++DPD+ GYNI FD PYLI +
Sbjct: 359 KEQKMLEKWADFVRQLDPDIFTGYNINNFDFPYLINR 395
>gi|324120746|dbj|BAJ78764.1| DNA polymerase delta catalytic subunit [Neocolochelyna itoi]
Length = 1003
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/618 (61%), Positives = 490/618 (79%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN +TRRRLAVYCLKDAYLP RLLDKLM I NY+EMARVTGV +
Sbjct: 384 QKEDVHHSIITDLQNGNPQTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVSLC 443
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL++GQ +KV+SQLLRKA+++ ++P + G+++ YEGATV+E + G+Y PIATLD
Sbjct: 444 SLLTKGQGVKVVSQLLRKARERGYLMPTHQGQGTDE-QYEGATVIEPKRGYYNDPIATLD 502
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
++SLYPSI+MA+N+CY+TL+ P KL L + +TP+ FVKS+++KG+LPEILE
Sbjct: 503 YSSLYPSIIMAHNICYTTLLGPATQHKLKLTEDKYTRTPTTAMFVKSSVRKGLLPEILEN 562
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK AK +LK KDP ++ VLDGRQLALK+SANSVYGFTGA G+LPC+EISSS T+
Sbjct: 563 LLTARKAAKTELKNEKDPFKQKVLDGRQLALKVSANSVYGFTGAQNGKLPCLEISSSTTA 622
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR+MIE TK+ VE ++ GY+H+A VIYGDTDSVMV+FGV T+E AM+LG EAA+++
Sbjct: 623 YGREMIEQTKQEVEQRYCVANGYKHDAVVIYGDTDSVMVKFGVKTIEDAMELGTEAAEFV 682
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FIKPIKLEFEK+Y+PYLLI+KKRYAGL +T P+K+DKMD KG+ETVRRDNC LV N+
Sbjct: 683 SLKFIKPIKLEFEKIYFPYLLINKKRYAGLLFTRPDKYDKMDCKGLETVRRDNCPLVANM 742
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L++RD GA Y K ISDLL NR+D+S LVITK LTKT +Y K AHVEL
Sbjct: 743 MNTCLQKLLIERDPDGATDYAKQIISDLLCNRIDISQLVITKELTKT--EYAAKQAHVEL 800
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRDA TAP +GDRVPYV AAKG AY+++EDPIYVLEN+IPID++YYLENQ+S
Sbjct: 801 AAKMKKRDAGTAPKLGDRVPYVFTSAAKGTPAYQKAEDPIYVLENSIPIDSNYYLENQLS 860
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
KPLLRIFEPIL + ++ LL G+HTR+ S++T + F +++ +C+GCKA++S+G
Sbjct: 861 KPLLRIFEPILGDKAESLLLRGEHTRTKSVATSRVGALAAFTRKKETCMGCKAILSSGRE 920
Query: 937 --TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LC HC+ RE+EL+ + ++LE F RLWT+CQ CQGSLHQ+VLCTSRDCPIFY
Sbjct: 921 HMALCQHCESRESELFQHELLLGRKLEEKFCRLWTECQRCQGSLHQEVLCTSRDCPIFYM 980
Query: 995 RKKAQKDMAEAKLQLDRW 1012
RKK + ++ + ++DR+
Sbjct: 981 RKKVRIELDAQEKRIDRF 998
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 137/295 (46%), Positives = 192/295 (65%), Gaps = 8/295 (2%)
Query: 115 GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANR-- 172
G I+R++GVT EG+SVCC VHGF PY +++ P+ F + L + R
Sbjct: 14 GPVPIMRMYGVTMEGNSVCCHVHGFCPYLFVTAPENFNNSHCKPFREALNKAVLADMRSN 73
Query: 173 NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK 232
N KVP+ + +E+VQK+S+ Y + PFLKI VALP ++A C+ +L++ G
Sbjct: 74 NDKVPEAILVVEIVQKQSMYGYAGEDLVPFLKITVALPKLIAPCKRLLEKETVFPTFGNH 133
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT------LSYCQLEFDCLYSD 286
+ YESN+ F +RFM+D ++VG +WI++P G+++ + S CQLE D +
Sbjct: 134 IYQAYESNIDFDIRFMVDTSVVGCSWIKLPPGQWKLRGQLGNKLPLTSRCQLEVDIAWDA 193
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
I+ PEGE++K+APFRILSFDIECAGRKG FPE +HDPVIQ+AN+V G+ +PF+RNV
Sbjct: 194 FIAHPPEGEWAKVAPFRILSFDIECAGRKGIFPEASHDPVIQIANMVIRHGDTEPFLRNV 253
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
TL +CAPI+G V+SF+ E +L W DF+R+ DPDV GYNI FD PYLI +
Sbjct: 254 FTLDTCAPIIGSQVLSFQKEAIMLEKWADFVRQCDPDVFTGYNINNFDFPYLINR 308
>gi|410982334|ref|XP_003997512.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 1 [Felis
catus]
Length = 1111
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/622 (62%), Positives = 483/622 (77%), Gaps = 10/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N +EMARVTGVP+
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTGVPLG 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLTRGQQVKVVSQLLRQAMREGLLMPVVKTEGVED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYGTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPPPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 962
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL---- 932
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR CIGC+ +
Sbjct: 963 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRHSCCIGCRTVXXXX 1022
Query: 933 -ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPI
Sbjct: 1023 XXXTGAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPI 1082
Query: 992 FYRRKKAQKDMAEAKLQLDRWN 1013
FY RKK +KD+ + + L R+
Sbjct: 1083 FYMRKKVRKDLEDQEQLLRRFG 1104
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 211/335 (62%), Gaps = 8/335 (2%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIG--DSNRELLPLSSGSAAIIRIFGVTREGH 130
A+W RP S Q + ++FQQL+ID+ +G P GS ++R FGVT EG
Sbjct: 77 ARWLRPSPPS-LDPQTEPLIFQQLEIDHYVGLAQPLPGAAPPPPGSVPVLRAFGVTDEGV 135
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC +HGF PYFY P G G + + + L + R K V +E+ +
Sbjct: 136 SVCCHIHGFAPYFYTPAPPGFGREHLGDLQRELNAAISRDQRGGKELAGPAVLSVELCSR 195
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
S+ Y PFL+I +ALP ++A R +L++GI++ GLG SF YE+NV F +RFM
Sbjct: 196 ESMFGYHGHGPSPFLRITLALPRLLAPARRLLEQGIRVPGLGTPSFAPYETNVDFEIRFM 255
Query: 249 IDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILS 306
+D +IVG NW+E+P GKY R K ++CQLE D +SD++S PEGE+ ++AP R+LS
Sbjct: 256 VDTDIVGCNWLELPAGKYLLRLEGKA-THCQLEADVQWSDVVSHPPEGEWQRIAPLRVLS 314
Query: 307 FDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETE 366
FDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E
Sbjct: 315 FDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYERE 374
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 375 EELLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 409
>gi|324120710|dbj|BAJ78746.1| DNA polymerase delta catalytic subunit [Karoophasma biedouwense]
Length = 992
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/615 (62%), Positives = 478/615 (77%), Gaps = 7/615 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H+II+DLQ+G TRRRLAVYCLKDAYLP RLLDKLM NY+EMARVTGVP+S
Sbjct: 378 QKEDVPHNIITDLQHGTDVTRRRLAVYCLKDAYLPLRLLDKLMCFINYMEMARVTGVPLS 437
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKAK + +IP A ++ +EGATV+E + G+Y PIATLD
Sbjct: 438 CLLTRGQQIKVVSQLLRKAKDRGYLIPAYSGAPQDE-QFEGATVIEPKKGYYADPIATLD 496
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ K +L P+ KTP+ FVK++++KG+LPEILE
Sbjct: 497 FSSLYPSIMMAHNLCYTTLL--RQGAKDSLTPDQYTKTPASNLFVKASVRKGLLPEILEN 554
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AKADLK DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 555 LLAARKKAKADLKLETDPFKQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 614
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE +F GY+H+A VIYGDTDSVM++FGV ++E AM LGREAA ++
Sbjct: 615 YGRVMIEQTKQEVEQQFNVANGYQHDAVVIYGDTDSVMIKFGVKSLEEAMSLGREAAAFV 674
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F+ PIKLEFEKVY+PYLLI+KKRYAGLY+T P+ +DKMD KGIETVRRDNC LV N+
Sbjct: 675 SAKFVHPIKLEFEKVYFPYLLINKKRYAGLYFTKPDHYDKMDCKGIETVRRDNCPLVANM 734
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L++RD GAV Y K ISDLL NR+D+S LVITK L K+ DY K AHVEL
Sbjct: 735 MNTCLQKLLINRDPDGAVNYAKQVISDLLCNRIDISQLVITKELAKS--DYAAKQAHVEL 792
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRDA TAP +GDRVPYVII AAK AY+++EDPIYVLENNIPID+ YYL+NQ+S
Sbjct: 793 AAKMKKRDAGTAPKLGDRVPYVIIAAAKNTPAYQKAEDPIYVLENNIPIDSSYYLDNQLS 852
Query: 880 KPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-GT 937
KPLLRIF PIL + A LL GDHTR+ ++ T + F +R+ +C+GCK+++++
Sbjct: 853 KPLLRIFSPILGDKAESVLLRGDHTRTKAVVTSRVGALSAFTRRKETCLGCKSVLADSAA 912
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LC+HC E +LY ++++ ELE F RLWTQCQ CQGSLH++VLCTSRDCPIFY RKK
Sbjct: 913 LCTHCAPNEPQLYQTELAKLNELEDRFCRLWTQCQHCQGSLHEEVLCTSRDCPIFYMRKK 972
Query: 998 AQKDMAEAKLQLDRW 1012
Q D+ L R+
Sbjct: 973 VQMDLVSQDKTLQRF 987
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/289 (47%), Positives = 191/289 (66%), Gaps = 2/289 (0%)
Query: 115 GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS 174
G ++RI+GVT +G+SVCC VHGF PYF++S P D F L + R++
Sbjct: 14 GPVPVMRIYGVTMDGNSVCCHVHGFSPYFFVSAPDNFTEDHCYPFMAALNKAVIADLRSN 73
Query: 175 K--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK 232
K + + V +E+V ++++ Y + FL+I VALP ++A+ + +L+R + LG
Sbjct: 74 KEEIQEAVLAVEIVSRQTVFGYWGEGKTNFLRITVALPRLIAAAKRLLERELVYPPLGTY 133
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
+ +ESN+ F +RFM+D +VG +W+E+P ++ + +S CQ+E D + +IS P
Sbjct: 134 DYQPFESNIDFDIRFMVDTQMVGCSWVELPARSWKPRSVLMSRCQIEVDVSWEKLISHPP 193
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSC 352
EGE+SK+APFRILSFDIECAGRKG FPEP DPVIQ+AN+V QG+++PFIRNV TL SC
Sbjct: 194 EGEWSKVAPFRILSFDIECAGRKGIFPEPNVDPVIQIANMVIQQGQQEPFIRNVFTLDSC 253
Query: 353 APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
APIVG V+S + E +L W DF+REVDPDV GYNI FD YLI +
Sbjct: 254 APIVGCQVLSHDKETGMLEKWADFVREVDPDVFTGYNINNFDFTYLINR 302
>gi|449681697|ref|XP_004209898.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Hydra
magnipapillata]
Length = 1082
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/620 (63%), Positives = 482/620 (77%), Gaps = 12/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH+IISDLQNGN +TRRRLAVYC+KDA LP RLLDKLM + NY+EMARVTGVP+S
Sbjct: 463 QKEDVHHAIISDLQNGNEQTRRRLAVYCMKDAILPLRLLDKLMCVINYMEMARVTGVPLS 522
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
+LL+RGQ +KV+SQLLRK+K+ + ++P K +AG E YEGATV++ G+Y KPIATL
Sbjct: 523 YLLTRGQQVKVVSQLLRKSKEHDFILPAQKIEAGDE---YEGATVIDPIKGYYRKPIATL 579
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DFASLYPSIMMA+NLCY+TL++ D ++N P+ TP FVK +++KG+LPEILE
Sbjct: 580 DFASLYPSIMMAHNLCYTTLLSKCDLERMN--PDEYIVTPCNHYFVKKSVRKGLLPEILE 637
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL+ARK+AK+DLK D + VLDGRQLALKISANSVYGFTGA VG+LPCIEISSSVT
Sbjct: 638 NLLSARKKAKSDLKGETDIFKAKVLDGRQLALKISANSVYGFTGAQVGKLPCIEISSSVT 697
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GRQMIE TK+LVEDK+ GY+++++VIYGDTDSVMVQFG V +M+LGREAA Y
Sbjct: 698 AFGRQMIERTKQLVEDKYNIKNGYKYDSKVIYGDTDSVMVQFGPDNVPDSMELGREAAAY 757
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FI PIKLEFEKVYYPYLLISKKRYAGLY++ P+ FDKMD KGIETVRRDN LV
Sbjct: 758 VSNEFIDPIKLEFEKVYYPYLLISKKRYAGLYYSKPDTFDKMDCKGIETVRRDNSPLVAK 817
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL K+L+DRD GAV Y K ISDLL NR+D+S LVITK LTKT ++Y K AH
Sbjct: 818 LINTCLQKLLIDRDPEGAVVYTKQVISDLLCNRIDISELVITKELTKTEEEYGNKQAHSA 877
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAE+M+KRDA +AP +GDRVPYVII KGAK YE++EDPIYVLENN+PIDT +YLE+Q+
Sbjct: 878 LAEKMKKRDAGSAPKLGDRVPYVIIAGVKGAKGYEKAEDPIYVLENNVPIDTKHYLEHQL 937
Query: 879 SKPLLRIFEPIL--KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG 936
KPLLRIFEPIL A+ L G+HT ++ T G+ KFAK+ +CI CKA+++ G
Sbjct: 938 MKPLLRIFEPILGENKAADLLFKGEHTLVKTVITAKVGGLAKFAKKMATCIHCKAVLAKG 997
Query: 937 ----TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+C +CK +E+EL+ K +S + LE F +LWTQCQ CQGSL ++VLCTS DCPIF
Sbjct: 998 KENSAVCDYCKPKESELFQKEMSTLYSLEEKFNKLWTQCQRCQGSLIEEVLCTSSDCPIF 1057
Query: 993 YRRKKAQKDMAEAKLQLDRW 1012
Y RKK QKD+ + R+
Sbjct: 1058 YMRKKVQKDLTHQDEVVQRF 1077
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 153/335 (45%), Positives = 206/335 (61%), Gaps = 10/335 (2%)
Query: 77 RPPLSSGYVSQCQSIMFQQLDIDYV----IGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
R P + G S+ Q F Q DI + +G + + + +SG I+R FGVT +G+SV
Sbjct: 59 RFPDNLGSYSEEQGERFHQ-DIKLIFLLYLGSALQGMPGPTSGPTQIVRFFGVTMQGNSV 117
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILE-GRMREANRNSKVPQFVRHIEMVQKRSI 191
C +HGF PYFYI PQ + S + L+ + + + + V ++E V K SI
Sbjct: 118 LCHIHGFVPYFYIVAPQDFKEEKCSQYRDCLDKAILADMKSKNDISHAVLNVEPVMKASI 177
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y K + FL+I VAL ++A + IL+ G+ + G G TYESN+ F +RFM+D
Sbjct: 178 YGYNFNKKRLFLRITVALQKLIAPAKRILEGGLFIFGPG--GCHTYESNIDFEVRFMVDT 235
Query: 252 NIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
N G NWIE+P G Y RK + S CQ+E D + IS PEG++ K+AP RILSFDI
Sbjct: 236 NTFGCNWIELPRGSYQVRKGSSMKSRCQIEVDVAFDKFISHEPEGQWDKIAPIRILSFDI 295
Query: 310 ECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
ECAGRKG FPEP D VIQ+AN+V QGEK+PFIRNV TL +CAPIVG V++++ E D+
Sbjct: 296 ECAGRKGIFPEPEKDKVIQIANMVIYQGEKEPFIRNVFTLDTCAPIVGSQVLTYQNESDL 355
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
AW DF+ EVDPD++ GYNI FD PYL+ + V
Sbjct: 356 FKAWSDFVNEVDPDMITGYNIVNFDFPYLLNRAKV 390
>gi|242018791|ref|XP_002429857.1| DNA polymerase delta catalytic subunit, putative [Pediculus humanus
corporis]
gi|212514875|gb|EEB17119.1| DNA polymerase delta catalytic subunit, putative [Pediculus humanus
corporis]
Length = 1096
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/621 (62%), Positives = 479/621 (77%), Gaps = 9/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN +TRRRLAVYCLKDAYLP RL++KLM NY+EMARVTGVP+S
Sbjct: 477 QKEDVHHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLIEKLMCFINYMEMARVTGVPLS 536
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK K+K+ ++P GS++ +EGATV+E + G+Y PIATLD
Sbjct: 537 CLLTRGQQIKVVSQLLRKTKEKHYLMPTHNSVGSDE-QFEGATVIEPKKGYYPDPIATLD 595
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P KLNL P+ + TPS FVK +++KG+LPEILE
Sbjct: 596 FSSLYPSIMMAHNLCYTTLLRPGVKEKLNLEPDKYSTTPSNHFFVKKSIRKGLLPEILEN 655
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AK DLK DP +K VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVTS
Sbjct: 656 LLTARKKAKTDLKNETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTS 715
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE K+ GY+H++EVIYGDTDSVM++FG T+E M+LGREAA Y+
Sbjct: 716 YGRSMIEQTKQEVEMKYNIANGYKHDSEVIYGDTDSVMIKFGNKTLEECMELGREAAVYV 775
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FI PIKLEFEKVY+PYLLISKKRYAGLY+T + +DKMD KG+ETVRRDN LV N+
Sbjct: 776 SSKFISPIKLEFEKVYFPYLLISKKRYAGLYFTKTDTYDKMDCKGLETVRRDNSPLVANM 835
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T CL KIL++R+ AV Y K ISDLL N++D+S LVITK LTK +DY K AHVEL
Sbjct: 836 ITTCLQKILINRNPDEAVNYAKKVISDLLCNKIDISQLVITKELTK--NDYAAKQAHVEL 893
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A++M+KRD TAP +GDRVPYVI A KG AY R+EDPIYVLEN++PID +YYLENQIS
Sbjct: 894 AQKMKKRDPGTAPKLGDRVPYVICCATKGTPAYCRAEDPIYVLENSVPIDFNYYLENQIS 953
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS---- 934
KPLLRIFEPIL + A LL GDHTR+ ++ T + F K++ SC+GCK++++
Sbjct: 954 KPLLRIFEPILGEKAESILLRGDHTRTKAMVTSKVGALFAFTKKKESCLGCKSVLNENEG 1013
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+ LC HCK LY +++ + E F RLWT+CQ CQGSLH++V+CTSRDCPIFY
Sbjct: 1014 SNALCKHCKPNAIALYLNHLNKYKTYESQFSRLWTECQRCQGSLHEEVICTSRDCPIFYM 1073
Query: 995 RKKAQKDMAEAKLQLDRW-NF 1014
RKK Q D+ ++R+ NF
Sbjct: 1074 RKKIQMDLQTQDQVMERFRNF 1094
Score = 314 bits (805), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 216/338 (63%), Gaps = 10/338 (2%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
+W RPPL + +S++FQQ++ID+ G + ++I+R++GVT EG+SV
Sbjct: 65 VRWCRPPLPK-FNPDKESLIFQQIEIDHYHGSPIPGMPGYQVSPSSIMRMYGVTMEGNSV 123
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRS 190
CC VHGF PYFY+S P D F + L + R+++ + + + +E+V K++
Sbjct: 124 CCHVHGFAPYFYVSVPSDFTEDHCKPFKKALNDVVMNDIRSNRENIKEAILDVELVFKQN 183
Query: 191 IMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMID 250
+ Y+ K FLK+ + LP + A+C+ ++D+ G + +ESN+ F +RFM+D
Sbjct: 184 MFGYEGDKKNKFLKVTIILPKLAAACKRLMDKETVYKAFGGYYYQFFESNIDFDIRFMVD 243
Query: 251 CNIVGGNWIEVPVGKYRKTAK-------TLSYCQLEFDCLYSDIISRHPEGEFSKMAPFR 303
++VG +WIE+P G ++ K S CQLE D ++ I+ PEGE+SK+APFR
Sbjct: 244 TDVVGCSWIELPPGTWKIRMKDSNHDYPITSRCQLEVDVGWNQFIAHAPEGEWSKVAPFR 303
Query: 304 ILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSF 363
ILSFDIECAGRKG FPEP HDPVIQ+AN+V QG+ +PFIRN+ TL SCAPIVG V+ F
Sbjct: 304 ILSFDIECAGRKGIFPEPNHDPVIQIANMVLKQGQSEPFIRNIFTLNSCAPIVGSQVLCF 363
Query: 364 ETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ E ++L +W +F+R+VDPD+ GYNI FD PYLI +
Sbjct: 364 DKETELLKSWGEFVRQVDPDICTGYNISNFDFPYLINR 401
>gi|344233498|gb|EGV65370.1| DNA polymerase delta catalytic subunit [Candida tenuis ATCC 10573]
Length = 1060
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/617 (61%), Positives = 482/617 (78%), Gaps = 7/617 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+AETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 442 QKEDVHHSIITDLQNGDAETRRRLAVYCLKDAYLPLRLVEKLMCLVNYTEMARVTGVPFS 501
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK ++++VIPN+K G+ + YEGATV+E G+Y+ PI TLD
Sbjct: 502 YLLSRGQQIKVISQLFRKCLEQDIVIPNMKSEGTNE-EYEGATVIEPSRGYYDVPITTLD 560
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + + L + TP+G+ FVK N ++GILP IL E
Sbjct: 561 FSSLYPSIMMAHNLCYTTLLNKQTIKTFGLNEDDYILTPNGDYFVKDNKRQGILPTILNE 620
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLK+ DP K+VL+GRQLALKISANSVYGFTGAT+G+LPC+ ISSS T+
Sbjct: 621 LLTARKKAKADLKKETDPFRKSVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSTTA 680
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MIE TK VE+ ++ G++++A+V+YGDTDSVM++FG + M+LG +AA+Y+
Sbjct: 681 FGRVMIEKTKNEVEEFYSKKNGFDYDAKVVYGDTDSVMIKFGYTDLSKCMELGEQAAEYV 740
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEK YYPYLLI+KKRYAGLYWTNP KFDKMDTKGIETVRRDNC LV+N+
Sbjct: 741 SSKFKNPIKLEFEKCYYPYLLINKKRYAGLYWTNPNKFDKMDTKGIETVRRDNCRLVQNV 800
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +RD+ A ++VK TI+DLL NR+DLS LVITK +K DY K AH+ L
Sbjct: 801 ITKVLVLILEERDVGKAERFVKQTIADLLQNRVDLSQLVITKAYSK--QDYAAKQAHIVL 858
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AE+MRKRDA +AP +GDRV YVII GAK Y++SEDP+YVLEN++PID +YYLENQ+S
Sbjct: 859 AEKMRKRDAGSAPTLGDRVAYVIINGPAGAKNYDKSEDPLYVLENSLPIDVNYYLENQLS 918
Query: 880 KPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
KPL+RIFEPI+ + +KELL+GDHTR++ + P + G++KFA++ +C CK + +
Sbjct: 919 KPLMRIFEPIMGDKKAKELLTGDHTRTVKRAAPKSGGLLKFARKAETCKNCKTPLKPHNK 978
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G LC +C LYC +++Q+ LE F RLWT+CQ CQGSLHQ+VLC++ DCPIFY R
Sbjct: 979 GLLCENCIEEGPRLYCSSLAQMNYLENKFSRLWTECQRCQGSLHQEVLCSNNDCPIFYMR 1038
Query: 996 KKAQKDMAEAKLQLDRW 1012
KKAQKD+ +L +W
Sbjct: 1039 KKAQKDVFIQGQELSKW 1055
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/338 (40%), Positives = 193/338 (57%), Gaps = 29/338 (8%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW RPPL + + I FQQLD + + + I R FG+T +G+S+
Sbjct: 58 KWDRPPLDPDFFNH--DISFQQLDAEETHLNDD-----------TIARFFGITDKGNSIL 104
Query: 134 CKVHGFEPYFYISCPQGMGPDD-ISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIM 192
C V GF Y Y+ P+G DD ++ F L + +R IE+ K SI
Sbjct: 105 CNVTGFLHYLYVPVPRGFSVDDNMNTFKNYLTNSF----------EGIRAIEVSAKESIW 154
Query: 193 YYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDC 251
+ PF KI V ++ RG+ +RG + + L +TY+ N+ + LR M+DC
Sbjct: 155 GFNNNIKVPFFKIFVNNARNISRLRGMFERGEVHFEELFPMGTVTYD-NINYLLRLMVDC 213
Query: 252 NIVGGNWIEVPVGKYR-KTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
I G +WI +P GKY + + L S CQ+E Y D+++ EGE+ KMAP RILSFD
Sbjct: 214 KITGMSWITLPKGKYHLQKDENLFQSTCQIECSINYKDLVTHASEGEWLKMAPLRILSFD 273
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPE HD VIQ+AN+V+ GE +PF+RNV T+ SC+PI+G + S E E +
Sbjct: 274 IECAGRKGIFPEAEHDQVIQIANVVSNYGEPKPFVRNVFTVNSCSPIIGSQIFSHEKEDE 333
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHH 406
+ + W++F+ +VDPDV+IGYN FDLPYL+++ H
Sbjct: 334 MFMHWKEFVLKVDPDVIIGYNTSNFDLPYLLDRARALH 371
>gi|347826748|emb|CCD42445.1| similar to Similar to dna polymerase delta catalytic subunit (ec
2.7.7.7) [Botryotinia fuckeliana]
Length = 616
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/614 (62%), Positives = 479/614 (78%), Gaps = 10/614 (1%)
Query: 408 IISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQS 467
+I++L NG E+RRRLAVYCLKDA+LPQRL+DKL + NY EMARVTGVP +FLLSRGQ
Sbjct: 1 MITELFNGTPESRRRLAVYCLKDAFLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQ 60
Query: 468 IKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSI 527
+K +SQL RKA ++ LVIPN+ SE+ YEGATV+E G+Y PIATLDFASLYPSI
Sbjct: 61 VKFISQLFRKALEQKLVIPNLSSNSSEE-QYEGATVIEPTRGYYSVPIATLDFASLYPSI 119
Query: 528 MMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILEELLAARKR 586
+ A+NLCY+TL+ + L L E TP+G+ FV + +KG+L +ILEELL ARK+
Sbjct: 120 IQAHNLCYTTLLKKDVVEALKLEKDEDYIVTPNGDMFVTTKQRKGLLTQILEELLTARKQ 179
Query: 587 AKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIE 646
AK +L DP +KAVL+GRQLALKISANSVYG TGATVG++PC+ I+SS TSYGRQMIE
Sbjct: 180 AKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKVPCLPIASSTTSYGRQMIE 239
Query: 647 HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKP 706
TK VE K+T GY H+A+VIYGDTDSVMV+FGV + AMKLG EAA Y+S FIKP
Sbjct: 240 KTKAEVEAKYTIANGYSHDAQVIYGDTDSVMVKFGVKELAEAMKLGEEAAQYVSSKFIKP 299
Query: 707 IKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHK 766
IKLEFEKVYYPYLLI+KKRYAGLYWTNP+K+DKMDTKGIETVRRDNC LV+N++ L
Sbjct: 300 IKLEFEKVYYPYLLINKKRYAGLYWTNPDKYDKMDTKGIETVRRDNCRLVQNVIETVLRM 359
Query: 767 ILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKR 826
IL+D+D+ GA YVK TISDLL N++D+S LVITK L K DY K AHVELAERM+KR
Sbjct: 360 ILIDQDVQGAQDYVKDTISDLLQNKIDMSKLVITKALAKA--DYTAKQAHVELAERMKKR 417
Query: 827 DAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIF 886
DA +AP +GDRV YVIIK + GAK +ERSEDPI+VLENN+PIDT YYL+NQ++KPL RIF
Sbjct: 418 DAGSAPTLGDRVAYVIIKGSAGAKNFERSEDPIFVLENNVPIDTKYYLDNQLAKPLGRIF 477
Query: 887 EPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGC-----KALISNGTLCS 940
EPIL + + LL+G HTR+IS++ P+ G+MKFAK+ +C+ C KA +G +C+
Sbjct: 478 EPILGETKANSLLAGAHTRAISVAAPTIGGLMKFAKKTSTCMSCKKPLVKAHEKDGAVCT 537
Query: 941 HCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQK 1000
C R E+Y K +++V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCPIFY R KA+K
Sbjct: 538 DCAPRIGEMYQKQLNKVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIFYMRMKAKK 597
Query: 1001 DMAEAKLQLDRWNF 1014
D+ +A +L+R++F
Sbjct: 598 DVEDAGKELERFDF 611
>gi|324120732|dbj|BAJ78757.1| DNA polymerase delta catalytic subunit [Thrips palmi]
Length = 1091
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/618 (62%), Positives = 481/618 (77%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I+DLQNG ++TRRRLAVYCLKDAYLP RLL+KLM I NY+EMARVTGV +
Sbjct: 472 QKEDVHHSVITDLQNGTSQTRRRLAVYCLKDAYLPLRLLEKLMCIINYMEMARVTGVTLG 531
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKAK+ + ++P + G + YEGATV+E + G+Y PI+TLD
Sbjct: 532 SLLTRGQQIKVVSQLLRKAKEHDYIMPTYQSTGGDD-QYEGATVIEPKRGYYGDPISTLD 590
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + KL L P+ + TP+ FVK++++KG+LPEILE
Sbjct: 591 FSSLYPSIMMAHNLCYTTLLQANNREKLGLTPDQYSHTPANNYFVKASVRKGLLPEILES 650
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLK+ DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 651 LLNARKKAKADLKKETDPFKQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 710
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK VE K+ GYEH+A VIYGDTDSVMV+FGV T+E AM+LG+EAA+Y+
Sbjct: 711 YGRTMIEQTKTEVETKYRIENGYEHDAVVIYGDTDSVMVKFGVKTLEEAMRLGQEAAEYV 770
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ FIKPIKLEFEKVY+PYLLI+KKRYAGLY+T+ +K+DKMD KG+ETVRRDNC LV N+
Sbjct: 771 TSKFIKPIKLEFEKVYFPYLLINKKRYAGLYFTSADKYDKMDCKGLETVRRDNCPLVANM 830
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL KIL+DR+ GAV Y K ISDLL NR+D+S LVITK LTK+ DY K AHVEL
Sbjct: 831 MNTCLQKILIDRNPDGAVAYAKQVISDLLCNRIDISNLVITKELTKS--DYAAKQAHVEL 888
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD AP +GDRVPYV+ A+KG AY ++EDPIYVLEN+IPID YYLENQ+S
Sbjct: 889 AAKMKKRDPGNAPKLGDRVPYVLTSASKGTPAYMKAEDPIYVLENSIPIDFTYYLENQLS 948
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN--- 935
KPLLRIFEPIL + ++ LL GDHTR+ ++ T + F ++ +C+GCKA++
Sbjct: 949 KPLLRIFEPILGDKAESILLRGDHTRTRAVMTSRVGALSAFTVKRQACLGCKAVLPKDQE 1008
Query: 936 -GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LCSHC EA+L+ + + + LE F RLWT+CQ CQGSLH++VLCTSRDCPIFY
Sbjct: 1009 ANALCSHCSPNEAKLFLSELQRYRGLEDRFSRLWTECQRCQGSLHEEVLCTSRDCPIFYM 1068
Query: 995 RKKAQKDMAEAKLQLDRW 1012
RKK Q ++ L+R+
Sbjct: 1069 RKKVQLELVTQDKALERF 1086
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 161/349 (46%), Positives = 224/349 (64%), Gaps = 11/349 (3%)
Query: 62 IEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIR 121
I Q D KW+RP Q Q++ FQQ+D+D+ G + G ++R
Sbjct: 50 IGQGPDTNQTSVKWSRPAPPPMNPDQ-QNLEFQQIDVDHYTGTPMPGMPGSQIGPVPVMR 108
Query: 122 IFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRM---REANRNSKVPQ 178
++GVT EG+SVCC VHGF PYF++S P+G F L + + NR++ V +
Sbjct: 109 LYGVTMEGNSVCCHVHGFSPYFFVSAPKGFNNSHCKPFKDSLNKAVLADMKGNRDN-VQE 167
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V +E+V+K+S+ Y+ Q FL++ VALP ++A+ + +L++G LG +F +YE
Sbjct: 168 AVLAVEIVKKQSLYGYRGDDMQNFLRVTVALPRLIAASKRLLEKGDIFTALGPHAFTSYE 227
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYR------KTAKTLSYCQLEFDCLYSDIISRHP 292
SN+ F +RFM+D N+VG NWIE+P G ++ KT S CQ+E D + +IS P
Sbjct: 228 SNIDFDIRFMVDANMVGCNWIELPAGAWKMRSKDSKTKPFASRCQIEVDVSWEKLISHLP 287
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSC 352
EGE++++APFRILSFDIECAGRKG FPEPTHDPVIQ+AN+V QG+ +PFIRNV TL +C
Sbjct: 288 EGEWARVAPFRILSFDIECAGRKGIFPEPTHDPVIQIANMVIRQGDSEPFIRNVFTLNTC 347
Query: 353 APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
APIVG V+S + E ++L W DF+REVDPD+ GYNI FD PYLI +
Sbjct: 348 APIVGCQVISCDKETEMLEKWADFVREVDPDIFTGYNITNFDFPYLINR 396
>gi|403171115|ref|XP_003330341.2| DNA polymerase delta subunit 1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169039|gb|EFP85922.2| DNA polymerase delta subunit 1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1055
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/621 (62%), Positives = 478/621 (76%), Gaps = 20/621 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+AETRRRLAVYCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 445 QKEDVHHSIITDLQNGSAETRRRLAVYCLKDAYLPQRLMDKLMCFVNYTEMARVTGVPFN 504
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL R+A + + ++P +K GS++ Y+GATV+E GFY+ PIATLD
Sbjct: 505 YLLSRGQQIKVVSQLYRRANEHSYLVPALKHEGSDE-PYDGATVMEPVRGFYDVPIATLD 563
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+NLCY+TL + + L L E TP+G+ FVK++ +KG+L +LE
Sbjct: 564 FASLYPSIMMAHNLCYTTLTDAKTVKLLELRQDEDFIITPNGDYFVKASKRKGLLAIVLE 623
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+LL+ARKRA+A+LK DP ++AVLDGRQLALKISANSVYGFTGATVG+LPC+ IS SVT
Sbjct: 624 DLLSARKRARAELKLETDPFKRAVLDGRQLALKISANSVYGFTGATVGKLPCLPISMSVT 683
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GR+MI+ TK VE K+T GY+ +AEVIYGDTDSVMV+FG EAAD+
Sbjct: 684 AFGREMIKITKNEVELKYTKANGYDDDAEVIYGDTDSVMVKFGCA----------EAADF 733
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F KPIKLEFEKVY+PYLLISKKRYAGL+WT EK DKMD KGIETVRRDNC LV
Sbjct: 734 VSAKFQKPIKLEFEKVYFPYLLISKKRYAGLHWTKLEKHDKMDAKGIETVRRDNCPLVST 793
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DRD+ GA Y K ISDLL NR+DLS LVITK L K DY K AHVE
Sbjct: 794 VIETCLKKMLIDRDVKGAEAYTKQVISDLLQNRIDLSQLVITKALAKA--DYAAKQAHVE 851
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRDA +AP +GDRV YVIIK K A+AYE+SEDP+YVLENNIPIDT YYL+NQ+
Sbjct: 852 LAKRMKKRDAGSAPALGDRVAYVIIKGTKDARAYEKSEDPLYVLENNIPIDTKYYLDNQL 911
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----- 933
SKPL+RIFEPIL S LL+GDHTR +SI+TP+ G+M F KR +C+GC+ +
Sbjct: 912 SKPLMRIFEPILGEKSSSLLAGDHTRIVSIATPTQGGLMGFIKRTETCLGCRVPLGKTTK 971
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+N +C +C+ + A LY K ++ Q E F RLWTQCQ CQGSLHQ+V+CT+ DCPIF
Sbjct: 972 DTNTAVCKNCRPKTAALYSKQMALTQGFENAFARLWTQCQRCQGSLHQEVICTASDCPIF 1031
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R K++KD+ ++ L R++
Sbjct: 1032 YMRTKSRKDVEDSYAVLQRFD 1052
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 184/331 (55%), Gaps = 20/331 (6%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
+ WARP LS Q +I+FQQ+DID S + +RIFGVT GHSV
Sbjct: 57 SNWARPTLSP-INPQNTAIIFQQIDID-----------EQSQSNVPRLRIFGVTEAGHSV 104
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIM 192
+ F PYF++ P+G D L + S + V + + K S+
Sbjct: 105 LVHIQDFLPYFWVPAPKGFQNTDCRELLTTLNSAL------SLGVKPVHSLSVAYKTSLW 158
Query: 193 YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCN 252
Y PFLKIV+ + + +RG + T+ESN+ + LRFMID
Sbjct: 159 GYTGDTQSPFLKIVLTDFKHLGRVKNAFERGEVNFREMFTACTTFESNIAYTLRFMIDKK 218
Query: 253 IVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIE 310
+ G NW+EVP G YR + S CQ+E + +IS PEGE+SKMAPFR+LS+DIE
Sbjct: 219 VTGMNWLEVPPGSYRLRTELEKASNCQIELETSAETLISHAPEGEWSKMAPFRVLSYDIE 278
Query: 311 CAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVL 370
C+GRKG FP+ DPVIQ+AN+VT G PFIRNV TL +C+ I G V+ F++E +L
Sbjct: 279 CSGRKGVFPDARLDPVIQIANMVTAHGSTVPFIRNVFTLNTCSHIAGSQVLEFKSEDQLL 338
Query: 371 LAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
W+ F+ E DPD++IGYN FD+PYL+++
Sbjct: 339 AKWQAFVAECDPDLVIGYNTSNFDMPYLLDR 369
>gi|448099944|ref|XP_004199250.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
gi|359380672|emb|CCE82913.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
Length = 1079
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/618 (61%), Positives = 481/618 (77%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 462 QKEDVQHSIITDLQNGNRETRRRLAVYCLKDAYLPSRLMEKLMCLVNYTEMARVTGVPFS 521
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + N+VIPN+K G+ + YEGA V+E G+Y+ PIATLD
Sbjct: 522 YLLARGQQIKVISQLFRKCLEDNIVIPNMKSEGTNED-YEGAIVIEPVRGYYDVPIATLD 580
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + LNL + TP+G+ F++ + +KGILP IL+E
Sbjct: 581 FSSLYPSIMMAHNLCYTTLLNKQTINALNLKEDDYTLTPNGDYFIRDHKRKGILPTILKE 640
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+A+ADLK+ DP +K VL+GRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT+
Sbjct: 641 LLTARKKARADLKKETDPFKKDVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSVTA 700
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK V++ ++ G+ +++VIYGDTDSVMV+FG +E MK G EAA Y+
Sbjct: 701 FGREMIEKTKNEVQEHYSIKNGFPFDSQVIYGDTDSVMVRFGFNDLETCMKYGEEAASYV 760
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLI+KKRYAGLYWT+P+KFDKMDTKGIETVRRDNC LV+N+
Sbjct: 761 STKFKDPIKLEFEKVYFPYLLINKKRYAGLYWTSPQKFDKMDTKGIETVRRDNCRLVQNV 820
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +RD+ A YVK TI+DLL NR+DLS LVITK +K DY K AH+EL
Sbjct: 821 ITKVLEYILEERDVAKAEHYVKQTIADLLQNRIDLSQLVITKAYSK--HDYAAKQAHIEL 878
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERM+KRD +AP +GDRV YVII +A +K YE+SEDP+YVLE+++PID YYL+NQ+S
Sbjct: 879 AERMKKRDPGSAPTLGDRVAYVIINSA-SSKNYEKSEDPLYVLEHSLPIDVKYYLDNQLS 937
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
PL+RIFEPIL + +KELL+G HTR+I +S P G+MKFAK+ C CK+ + +
Sbjct: 938 NPLMRIFEPILGEKKAKELLAGSHTRTIKMSAPKTGGLMKFAKKAELCKNCKSPLKPTNK 997
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G LC +C +LY T++Q+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY R
Sbjct: 998 GALCENCLPMAPKLYGDTLAQMNYLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFYMR 1057
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KKAQKD+A L +WN
Sbjct: 1058 KKAQKDVAAQAKDLHKWN 1075
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 195/331 (58%), Gaps = 26/331 (7%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W RPPL + + + I FQQLD + + D LSS R FG+T EG+SV C
Sbjct: 78 WKRPPLPADFDASTTDITFQQLDAEENMVDG------LSSA-----RFFGITEEGYSVLC 126
Query: 135 KVHGFEPYFYISCPQGMGPDD-ISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
+V F YFY+ P+G D +S F L+ Q + E+ K SI
Sbjct: 127 EVRNFLHYFYVPVPKGFFRDSHLSQFENYLKSNY----------QGICKAEICLKESIWG 176
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCN 252
+ PFLKI V ++ RG +RG I+ + L +TY+ N+ + LR M+DC
Sbjct: 177 FNNNVKSPFLKIYVDNTKNISKIRGSFERGEIRFENLFPPQNVTYD-NINYLLRLMVDCK 235
Query: 253 IVGGNWIEVPVGKYRKTA--KTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIE 310
I G +W+ +P GKY + + +S CQLE Y DIIS P+GE+ K+AP R+LSFDIE
Sbjct: 236 ISGMSWLTLPKGKYGMISDFEKVSTCQLECFIDYRDIISHPPDGEWLKLAPLRVLSFDIE 295
Query: 311 CAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVL 370
C+GRKG FPE D VIQ+AN+V+ GE +PF+RNV T+ +CA I+G + ETE ++L
Sbjct: 296 CSGRKGIFPEADQDSVIQIANVVSKTGESKPFVRNVFTVNTCASIIGSQIFEHETEEEML 355
Query: 371 LAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ WR+FI +VDPD++IGYNI FDLPYLI++
Sbjct: 356 MHWRNFIVDVDPDIIIGYNIANFDLPYLIDR 386
>gi|255731752|ref|XP_002550800.1| DNA polymerase delta catalytic subunit [Candida tropicalis MYA-3404]
gi|240131809|gb|EER31368.1| DNA polymerase delta catalytic subunit [Candida tropicalis MYA-3404]
Length = 1079
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/621 (62%), Positives = 488/621 (78%), Gaps = 11/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN+ETRRRLAVYCLKDA+LP RLLDKLM + NY EMARVTGVP S
Sbjct: 459 QKEDVQHSIITDLQNGNSETRRRLAVYCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFS 518
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK Q+++VIPN++ G+ + YEGATV+E G+Y+ PIATLD
Sbjct: 519 YLLSRGQQIKVISQLFRKCLQEDVVIPNLRSEGTNE-EYEGATVIEPERGYYDVPIATLD 577
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + + L + KTP+G+ FVKS+L++GILP IL E
Sbjct: 578 FSSLYPSIMMAHNLCYTTLLNKKSIQAYGLTEDDYTKTPNGDYFVKSSLRQGILPTILNE 637
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLK+ DP +K VL+GRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT+
Sbjct: 638 LLTARKKAKADLKKETDPFKKDVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSVTA 697
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK +V+D ++ G+ ++A+VIYGDTDSVMV FG +E MKLG EAA+Y+
Sbjct: 698 FGREMIEKTKNVVQDYYSKKNGHPYDAKVIYGDTDSVMVCFGYEDLETCMKLGEEAANYV 757
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVY+PYLLI+KKRYAGLYWT PEKFDKMDTKGIETVRRDNC LV+N+
Sbjct: 758 STKFKDPIKLEFEKVYFPYLLINKKRYAGLYWTRPEKFDKMDTKGIETVRRDNCRLVQNV 817
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
VT+ L IL +RD+ A ++VK TI+DLL NR+DLS LVITK +K DY K AHVEL
Sbjct: 818 VTKVLEFILEERDVGKAERFVKQTIADLLQNRVDLSQLVITKAYSK--HDYSAKQAHVEL 875
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERM+ RD +AP +GDRV YVIIK K YE+SEDP+YVLEN++PID YYLE Q++
Sbjct: 876 AERMKARDPGSAPQLGDRVAYVIIKTG-SDKNYEKSEDPLYVLENSLPIDVKYYLEQQLT 934
Query: 880 KPLLRIFEPILKNA-SKELLSGDHTRSISISTPSNS-GIMKFAKRQLSCIGCKALI---S 934
KPL RIF PIL +A ++ELL+GDHTR+I ++ P + G+M+F K CI CK + +
Sbjct: 935 KPLERIFNPILGDAKTRELLNGDHTRTIKVAAPKKAGGLMRFTKTLEVCISCKNPLKPGN 994
Query: 935 NGTLCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+G LC +C G+ +LY +SQ+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIF
Sbjct: 995 HGALCQNCIVDGKGPDLYGAALSQMNYLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIF 1054
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y RKKA+KD+ + ++L +W+
Sbjct: 1055 YMRKKAEKDVHQKSIELVKWD 1075
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 198/347 (57%), Gaps = 29/347 (8%)
Query: 60 RDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAI 119
RD+E D W+RPPL S + + I FQQLD + D +
Sbjct: 67 RDLENDDD-----QSWSRPPLPSDFNPDLEDISFQQLDAEEHSDDID-----------TY 110
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDD-ISHFHQILEGRMREANRNSKVPQ 178
R FG+T+EG SV C V GF YFY P+G D+ ++ F L+ R +
Sbjct: 111 ARFFGITKEGRSVLCNVTGFVHYFYSPVPKGFLKDEHLNDFVSYLQARH----------E 160
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTY 237
+ +E+ K SI Y + P+ KI V + RG +RG IQ + + +TY
Sbjct: 161 GIEKVEIKLKESIWGYNKNIKTPYFKIYVNGNRNITKVRGAFERGQIQFNDMFPSESVTY 220
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFS 297
+ N+ + LR MIDC I G +WI +P KY+ K +S CQ+E Y D+IS EGE+
Sbjct: 221 D-NINYLLRLMIDCKITGMSWITLPKTKYKLVTKKISTCQIECSIDYRDLISHPSEGEWL 279
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
+MAP RILSFDIECAGRKG FPE HDPVIQ+AN+V GE +PFIRNV T+ SC+PI+G
Sbjct: 280 QMAPLRILSFDIECAGRKGIFPEAKHDPVIQIANVVQRSGESKPFIRNVFTVGSCSPIIG 339
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
+ S E E D+L+ W++FI EVDPDV+IGYN FD+PY++ + +
Sbjct: 340 SQIFSHEKEEDMLMHWKEFICEVDPDVIIGYNTANFDIPYVLRRAEA 386
>gi|389634743|ref|XP_003715024.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae 70-15]
gi|351647357|gb|EHA55217.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae 70-15]
gi|440470521|gb|ELQ39588.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae Y34]
gi|440488502|gb|ELQ68227.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae P131]
Length = 1103
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/624 (62%), Positives = 491/624 (78%), Gaps = 14/624 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLA+YCLKDAYLPQRL+DKL + NY EM+RVTG P +
Sbjct: 479 QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMSRVTGAPFN 538
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
FLL+RGQ ++ LSQL RKA ++ LVIPN+ Q+ EQ YEGATV+E G+Y+ P+ATL
Sbjct: 539 FLLTRGQQVRFLSQLFRKALEQKLVIPNLSVQSSDEQ--YEGATVIEPTRGYYDVPVATL 596
Query: 519 DFASLYPSIMMAYNLCYSTLVTPE--DARKLNLPPECVNKTPSGETFVKSNLQKGILPEI 576
DFASLYPSIM A+NLCY+TLVT + DA L + + TP+G+ FV +KG+L +I
Sbjct: 597 DFASLYPSIMQAHNLCYTTLVTKKAIDAFGLKKDEDYI-VTPNGDFFVTIKQRKGLLAQI 655
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
LEELLAARK+AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS
Sbjct: 656 LEELLAARKQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATNGKLPCLEIASS 715
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
TS+GRQMIE TK+ VE K+ GY H+A+VIYGDTDSVMV+FG + AMKLG EAA
Sbjct: 716 TTSFGRQMIEKTKEEVEKKYRVANGYSHDAQVIYGDTDSVMVKFGTKDLAEAMKLGEEAA 775
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
+Y+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK+DKMDTKGIETVRRDNCLLV
Sbjct: 776 NYVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLV 835
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+ ++ + L IL+D+D+PGA +YVK TI++LL N++D+S LVITK LTK DDY K AH
Sbjct: 836 QTVIEKVLRMILIDQDVPGAQEYVKETIAELLQNKVDMSKLVITKALTK--DDYSAKQAH 893
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELA+RM+KRDA +AP +GDRV YV+IK A G+K +ERSEDPIYVLENN+PIDT YYL+N
Sbjct: 894 VELAQRMKKRDAGSAPGLGDRVAYVMIKGATGSKNFERSEDPIYVLENNVPIDTKYYLDN 953
Query: 877 QISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-- 933
Q++KPL RIFEPIL + +K LL GDHTR +S++ S G+MKFAK+ +C+ CK +
Sbjct: 954 QLAKPLGRIFEPILGETKAKSLLMGDHTRVVSVAASSVGGLMKFAKKTQTCMACKKPLTG 1013
Query: 934 ---SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
S G +C+ R ELY KT+ +V +LEV FGRLWTQCQ CQGS+H +V+C+S+DCP
Sbjct: 1014 KEESQGAVCADDAPRVGELYKKTLDRVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCP 1073
Query: 991 IFYRRKKAQKDMAEAKLQLDRWNF 1014
IFY R KA+KD+ + +L R++F
Sbjct: 1074 IFYMRMKAKKDLEDGNKELQRFDF 1097
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 196/358 (54%), Gaps = 29/358 (8%)
Query: 55 ESLILRDIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
ES +L + Q + + + W+RPP+ + + + + FQ ++ +
Sbjct: 64 ESEVLEKLSQDISDAKHNNTEKDQSWSRPPIPADFSPKTSKLCFQSIEAEE--------- 114
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
G A +++FGVT +G+SV V F Y Y++ P G D + F LE + +
Sbjct: 115 -GTLHGGQATVKLFGVTEDGNSVMLHVKEFRHYLYVAAPTSFGQKDCNAFKAFLETNIAQ 173
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL 229
+ ++M + +I +Q PFLKI V P + R ++ G +
Sbjct: 174 HQ------PAIHSVQMTMRENIYGFQNNTQNPFLKITVTDPKFINKVRSTIESG-NANWK 226
Query: 230 GM----KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCL 283
GM MT++ N+ + LRFM+DC I G +W+E P Y ++ S CQ+E +
Sbjct: 227 GMWKHDGGIMTFD-NIQYVLRFMVDCKIQGMSWVEAPAATYTLVPESQRQSNCQIEAEMS 285
Query: 284 YSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFI 343
Y D+I+ P GE+SKMAP RILSFDIECAGRKG FPE DPVIQ+AN+VT G+K+PF+
Sbjct: 286 YRDLIAHKPVGEWSKMAPLRILSFDIECAGRKGIFPEANMDPVIQIANVVTKYGDKKPFV 345
Query: 344 RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
RNV L +PIV ++ F E+ +L +WR+F+ EVDPD++ GYNI FD PYL+++
Sbjct: 346 RNVFCLDQTSPIVATQILEFSQEQKMLSSWRNFMVEVDPDIITGYNIANFDFPYLLDR 403
>gi|296420586|ref|XP_002839850.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636056|emb|CAZ84041.1| unnamed protein product [Tuber melanosporum]
Length = 1067
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/622 (64%), Positives = 495/622 (79%), Gaps = 23/622 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++LQNG A++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 456 QKEDVHHSMITELQNGTADSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 515
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
+LLSRGQ IK +SQL RKAK++ LV+PN+ Q G +Q YEGATV+E G+Y+ PIATL
Sbjct: 516 YLLSRGQQIKFISQLYRKAKEQKLVVPNLPPQGGDDQ--YEGATVIEPERGYYDVPIATL 573
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEIL 577
DFASLYPSIM A+NLCY+TLV E +L L + TP+G+ FVK++ +KG++P IL
Sbjct: 574 DFASLYPSIMQAHNLCYTTLVKKETCDRLGLQKDIDYEITPNGDRFVKAHRRKGMVPLIL 633
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
E LL ARK+AKADLK+A DP EKAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SSV
Sbjct: 634 EALLGARKKAKADLKKATDPFEKAVLNGRQLALKISANSVYGITGATVGKLPCLPIASSV 693
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
T YGRQMI TK+ VE ++T GY H+A+VIYGDTDSVMV+FG + AAM+LG+EAA+
Sbjct: 694 TGYGRQMIMRTKEEVEKRYTIANGYTHDAKVIYGDTDSVMVKFGPKDLPAAMELGKEAAE 753
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
++S F+ PIKLEFEKVY+PYLLI+KKRYAGLYWTN EK DKMD+KGIETVRRDNC L
Sbjct: 754 FVSQKFVTPIKLEFEKVYFPYLLINKKRYAGLYWTNTEKHDKMDSKGIETVRRDNCRL-- 811
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
+L+D+D+ GA YVK ISDLL NR+D+S LVITK L+K +DY K AHV
Sbjct: 812 ---------LLIDQDVEGAQTYVKDLISDLLQNRIDMSQLVITKALSK--NDYTAKQAHV 860
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELAERMRKRDA +AP +GDRV YVI+K A GAK YE+SEDPI+VLEN++PIDT YYLENQ
Sbjct: 861 ELAERMRKRDAGSAPTLGDRVAYVIVKGAGGAKNYEKSEDPIFVLENSVPIDTKYYLENQ 920
Query: 878 ISKPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS-- 934
+SKPL RIFEPI+ + +++LL+GDHTR+IS+S P+ G+MKFAK+ +C+GCK ++
Sbjct: 921 LSKPLSRIFEPIIGDRKAQQLLTGDHTRTISVSAPTVGGLMKFAKKTETCMGCKIPLTKK 980
Query: 935 ---NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
G +CS CK R ELY KTV++V ELEV F RLWTQCQ CQGS+H +V+C+SRDCPI
Sbjct: 981 EEAGGAVCSDCKPRFGELYQKTVTRVSELEVKFSRLWTQCQRCQGSIHCEVICSSRDCPI 1040
Query: 992 FYRRKKAQKDMAEAKLQLDRWN 1013
FY R KA+KD+ +A L R++
Sbjct: 1041 FYMRMKAKKDVVDAGKDLRRFD 1062
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 191/341 (56%), Gaps = 39/341 (11%)
Query: 63 EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRI 122
EQ QD W RP L + Q +S++FQQ++ D G +R+ I++
Sbjct: 77 EQDQD-------WCRPHLPKSWNPQEESLIFQQIECDE--GTFDRK---------TTIQL 118
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRH 182
FGVT GHSV V F Y Y++ P G I F LE +++ + +
Sbjct: 119 FGVTEAGHSVLLHVTDFHHYLYVAAPIGFTQQHIPGFRGFLEAKLQNG-----LDPAIAC 173
Query: 183 IEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVL 242
+ ++ + ++ + + P ++ A+ + + G DG MTY++ +
Sbjct: 174 VHLLLRENLYGFNGNQQSPLIE------HGDANYQKMWPAG---DG----GIMTYDA-IQ 219
Query: 243 FALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
+ +RFM+D I G +W+EVP G+YR T + LS CQ+E + ++IS EGE+ KMA
Sbjct: 220 YVMRFMVDTMIPGMSWVEVPAGEYRLVDTREKLSNCQIEAKVHFKNLISHPSEGEYQKMA 279
Query: 301 PFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDV 360
P RILSFDIECAGRKG FPEP DPVIQ+AN++T GE +PFIRNV TL +CA IV V
Sbjct: 280 PLRILSFDIECAGRKGIFPEPHQDPVIQIANMITKYGESKPFIRNVFTLGTCASIVNTQV 339
Query: 361 MSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
SF E +L++W F+ E DPDV+IGYNI FD PYL+++
Sbjct: 340 FSFNNEGKMLISWSQFLHEADPDVIIGYNIANFDFPYLLDR 380
>gi|169615194|ref|XP_001801013.1| hypothetical protein SNOG_10753 [Phaeosphaeria nodorum SN15]
gi|160702905|gb|EAT82147.2| hypothetical protein SNOG_10753 [Phaeosphaeria nodorum SN15]
Length = 1115
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/626 (60%), Positives = 483/626 (77%), Gaps = 12/626 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L NG++ +RRRLAVYCLKDAYLPQRLLDKLM + NY EMARVTGVP +
Sbjct: 484 QKEDVHHSMITELYNGDSNSRRRLAVYCLKDAYLPQRLLDKLMCLVNYTEMARVTGVPFN 543
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++L+RGQ I+ +SQL RKA L++P++ G YEGATV+E + G+Y++P+ATLD
Sbjct: 544 YILARGQQIRFVSQLFRKALDHQLIVPDLPNQGDNGDQYEGATVIEPKRGYYKQPVATLD 603
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+T + + KL + E TP+G+ F + +KG+L +ILE
Sbjct: 604 FASLYPSIMQAHNLCYTTWLDRQTVEKLKMKKDEDYIVTPNGDMFCTAKTRKGLLSQILE 663
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARKRAK +L DP +KAVL+GRQLALK++ANSVYG TGAT G+LPC+ I+SS T
Sbjct: 664 ELLGARKRAKKELAVETDPFKKAVLNGRQLALKVTANSVYGLTGATNGKLPCLAIASSTT 723
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S GRQMIE TK VE K+ GY H+AEVIYGDTDSVMV+FG + AMKLG EAA Y
Sbjct: 724 SIGRQMIEKTKAEVEAKYNIANGYSHDAEVIYGDTDSVMVKFGTSELAEAMKLGEEAAQY 783
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLYWTNP K+DKMDTKGIETVRRDNC LV N
Sbjct: 784 VSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTNPVKWDKMDTKGIETVRRDNCRLVVN 843
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD-----YEVK 813
++ L +L+D+D GA ++VK TI+DLL N++DLS LVITK LTK + Y K
Sbjct: 844 VIDTSLRMLLIDQDPEGAQEFVKETIADLLQNKIDLSNLVITKALTKQENKDGTGGYANK 903
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
AHVELAERM+KRDA +AP +GDRV YV+IK+A GA+ +E+SEDP+YVLENNIPIDT YY
Sbjct: 904 QAHVELAERMKKRDAGSAPALGDRVAYVMIKSASGARNFEKSEDPLYVLENNIPIDTKYY 963
Query: 874 LENQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL 932
L+NQ++KPL RIFEPIL + + LL+G+HTRSI+++ P+ G+MKF K+ +C+GCK
Sbjct: 964 LDNQLAKPLGRIFEPILGEKKANSLLTGEHTRSITVAAPTMGGLMKFTKKTSTCMGCKKP 1023
Query: 933 IS-----NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSR 987
++ +G +C +C+ R ELY KT+S+V ELEV F RLWTQCQ CQGS+H +V+C SR
Sbjct: 1024 LTGVHEKDGAVCENCRPRLGELYTKTLSKVSELEVRFSRLWTQCQRCQGSVHCEVICESR 1083
Query: 988 DCPIFYRRKKAQKDMAEAKLQLDRWN 1013
DCPIFY R KA+KD+ +A +L R++
Sbjct: 1084 DCPIFYMRMKARKDVEDAGKELVRFD 1109
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/366 (39%), Positives = 217/366 (59%), Gaps = 30/366 (8%)
Query: 45 LDETL--LPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVI 102
+ETL + +D E+L + E+ Q +W RP L+ + Q+++FQQ++ + +
Sbjct: 64 FEETLEQMTQDIETLKGNNTEKDQ-------QWQRPALAHDFNELTQNLVFQQIEAEEGV 116
Query: 103 GDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQI 162
+ R +++FGVT G+SV V GF YFY++ P G P D +
Sbjct: 117 LNGGR----------TTVKLFGVTENGNSVLVHVTGFMHYFYVAAPIGFQPQDCDAYKIY 166
Query: 163 LEGR-MREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD 221
LE ++ N++S V + ++M + +I+ YQ + P+LKI V P M+ R ++
Sbjct: 167 LESECQKQLNQHSAV---IYSVQMTMRENILRYQGNQKSPYLKITVIDPKMINRVRTMVS 223
Query: 222 RGI----QLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSY 275
+G +L G +T++ N+ + LRFMID + G +W+EVP GKY+ S
Sbjct: 224 KGFANWKRLWPSGHDEILTFD-NITYVLRFMIDTKMAGMSWVEVPAGKYKMLNPRDRHSN 282
Query: 276 CQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTL 335
CQ+E YSD+I+ EGE+SK+AP RILSFDIECAGRKG FPEP DPVIQ+AN+VT
Sbjct: 283 CQIEAQLHYSDLIAHLSEGEWSKIAPLRILSFDIECAGRKGIFPEPNVDPVIQIANVVTR 342
Query: 336 QGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDL 395
GE +PF+RNV + + +PIV ++SF E ++L+ WRDF+ EVDPDV+IGYN FD
Sbjct: 343 SGESKPFVRNVFCMDTVSPIVATQILSFSNEGEMLMKWRDFLEEVDPDVIIGYNTSNFDF 402
Query: 396 PYLIEK 401
PYL+++
Sbjct: 403 PYLLDR 408
>gi|340714996|ref|XP_003396007.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 1
[Bombus terrestris]
Length = 1090
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/619 (62%), Positives = 488/619 (78%), Gaps = 10/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGNA+TRRRLAVYCLKDAYLP RLLDKLM IF Y+EMARVTGV I
Sbjct: 471 QKEDVHHSIITDLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIFIYMEMARVTGVSIC 530
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIP-NVKQAGSEQGTYEGATVLEARAGFYEKPIATL 518
LL+RGQ IKV+SQLLRK ++K +IP + QA EQ +EGATV+E + G+Y PIATL
Sbjct: 531 SLLTRGQQIKVVSQLLRKTREKGYLIPVHRGQASDEQ--FEGATVIEPKRGYYSDPIATL 588
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DF+SLYPSI+MA+NLCY+TL+ KL + + + TPS FVK+ L+KGILPEILE
Sbjct: 589 DFSSLYPSIIMAHNLCYTTLLKRNTQIKLKIDSDDITVTPSDSQFVKATLRKGILPEILE 648
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL ARK AKA+LK+ DPL++ VLDGRQ ALK+SANSVYGFTGA +G+LPC++IS+SVT
Sbjct: 649 NLLTARKAAKAELKKETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLDISASVT 708
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MIE TK+ VE ++ GY+++A V+YGDTDSVM++FGV TVE AM+LGREAA+Y
Sbjct: 709 AYGRTMIERTKQEVEGQYCVSKGYKNDAVVVYGDTDSVMIKFGVKTVEEAMELGREAAEY 768
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV N
Sbjct: 769 VSSKFLKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNCPLVAN 828
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DR+ A+ Y K ISDLL NR+D+S LV+TK LTKT DY K AHVE
Sbjct: 829 MMNTCLQKLLIDRNPNDALNYAKQIISDLLCNRIDISQLVVTKELTKT--DYAAKQAHVE 886
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA +M+KRDA AP +GDRVPYV I+AAKG AY+++EDPIYVLENN+PIDT+YYLENQ+
Sbjct: 887 LAAKMKKRDAGNAPKLGDRVPYVFIRAAKGTPAYQKAEDPIYVLENNVPIDTNYYLENQL 946
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS--- 934
+KPL+RIFEPIL + A LL GDHTR+ S+ T + F +++ C+GCKA+++
Sbjct: 947 AKPLVRIFEPILGEKAESLLLKGDHTRTKSVVTSKVGALFAFTRKKEICLGCKAVLTPER 1006
Query: 935 -NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
LC +C+ +EAELY + ++LE F RLWT+CQ CQGSLHQ+VLCT+RDCPIFY
Sbjct: 1007 EKMALCKYCEPKEAELYQTELYLGRKLEEKFCRLWTECQRCQGSLHQEVLCTNRDCPIFY 1066
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
RKK Q ++ ++++R+
Sbjct: 1067 MRKKVQMELDTQMIRIERF 1085
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 158/397 (39%), Positives = 226/397 (56%), Gaps = 35/397 (8%)
Query: 17 KESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWA 76
++ +P +A T ++DEF D ++E P E + + KW
Sbjct: 22 EDDYPGSFEAELATMDEMEDEFGDMSQVIEEG--PAQENTYL---------------KWN 64
Query: 77 RPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGS----AAIIRIFGVTREGHSV 132
RPP Q +++FQQ++ID+ G LP GS I+R+FGVT G+SV
Sbjct: 65 RPP-PPELNPQKDALIFQQIEIDHYSGTP----LPGMPGSNIPPVPIMRMFGVTELGNSV 119
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS--KVPQFVRHIEMVQKRS 190
CC VHGF PY Y++ PQ F + L M + R++ + + V +E + K++
Sbjct: 120 CCHVHGFNPYLYVTAPQNFNEHHCKLFKEALNKAMLKDMRSNPENIQEAVLAVERLYKQN 179
Query: 191 IMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMID 250
+ Y + FLKI VALP +VA C+ +++ L + +ESN+ F +RFM+D
Sbjct: 180 MYGYTGNEKSLFLKITVALPRLVARCKKVVEEETILSEFN-HCYSAFESNIDFDIRFMVD 238
Query: 251 CNIVGGNWIEVPVGKYR------KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
++VG +WIE+P ++ S CQLE D + I+ P+GE+SK+APFRI
Sbjct: 239 TSVVGCSWIELPPKTWKLRQHNGHNLPFTSRCQLEVDIAWDAFIAHAPQGEWSKIAPFRI 298
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP HDPVIQ+AN+ QGE +PF+RN+ TL +CAPIVG V+SFE
Sbjct: 299 LSFDIECAGRKGIFPEPNHDPVIQIANMAIRQGEAEPFLRNIFTLDTCAPIVGCQVLSFE 358
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E+ +L W DF+R++DPD+ GYNI FD YLI +
Sbjct: 359 KEQKMLEKWADFVRQLDPDIFTGYNINNFDFTYLINR 395
>gi|340714998|ref|XP_003396008.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 2
[Bombus terrestris]
Length = 1104
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/619 (62%), Positives = 488/619 (78%), Gaps = 10/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGNA+TRRRLAVYCLKDAYLP RLLDKLM IF Y+EMARVTGV I
Sbjct: 485 QKEDVHHSIITDLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIFIYMEMARVTGVSIC 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIP-NVKQAGSEQGTYEGATVLEARAGFYEKPIATL 518
LL+RGQ IKV+SQLLRK ++K +IP + QA EQ +EGATV+E + G+Y PIATL
Sbjct: 545 SLLTRGQQIKVVSQLLRKTREKGYLIPVHRGQASDEQ--FEGATVIEPKRGYYSDPIATL 602
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DF+SLYPSI+MA+NLCY+TL+ KL + + + TPS FVK+ L+KGILPEILE
Sbjct: 603 DFSSLYPSIIMAHNLCYTTLLKRNTQIKLKIDSDDITVTPSDSQFVKATLRKGILPEILE 662
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL ARK AKA+LK+ DPL++ VLDGRQ ALK+SANSVYGFTGA +G+LPC++IS+SVT
Sbjct: 663 NLLTARKAAKAELKKETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLDISASVT 722
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MIE TK+ VE ++ GY+++A V+YGDTDSVM++FGV TVE AM+LGREAA+Y
Sbjct: 723 AYGRTMIERTKQEVEGQYCVSKGYKNDAVVVYGDTDSVMIKFGVKTVEEAMELGREAAEY 782
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV N
Sbjct: 783 VSSKFLKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L+DR+ A+ Y K ISDLL NR+D+S LV+TK LTKT DY K AHVE
Sbjct: 843 MMNTCLQKLLIDRNPNDALNYAKQIISDLLCNRIDISQLVVTKELTKT--DYAAKQAHVE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA +M+KRDA AP +GDRVPYV I+AAKG AY+++EDPIYVLENN+PIDT+YYLENQ+
Sbjct: 901 LAAKMKKRDAGNAPKLGDRVPYVFIRAAKGTPAYQKAEDPIYVLENNVPIDTNYYLENQL 960
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS--- 934
+KPL+RIFEPIL + A LL GDHTR+ S+ T + F +++ C+GCKA+++
Sbjct: 961 AKPLVRIFEPILGEKAESLLLKGDHTRTKSVVTSKVGALFAFTRKKEICLGCKAVLTPER 1020
Query: 935 -NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
LC +C+ +EAELY + ++LE F RLWT+CQ CQGSLHQ+VLCT+RDCPIFY
Sbjct: 1021 EKMALCKYCEPKEAELYQTELYLGRKLEEKFCRLWTECQRCQGSLHQEVLCTNRDCPIFY 1080
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
RKK Q ++ ++++R+
Sbjct: 1081 MRKKVQMELDTQMIRIERF 1099
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/406 (39%), Positives = 231/406 (56%), Gaps = 23/406 (5%)
Query: 8 ARKRPPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQD 67
A+ R ++ +P +A T ++DEF D ++E P D + Q+
Sbjct: 15 AKYRNRDDDEDDYPGSFEAELATMDEMEDEFGDMSQVIEE---PPDVQLNKAGKGGPAQE 71
Query: 68 FASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGS----AAIIRIF 123
+ KW RPP Q +++FQQ++ID+ G LP GS I+R+F
Sbjct: 72 --NTYLKWNRPP-PPELNPQKDALIFQQIEIDHYSGTP----LPGMPGSNIPPVPIMRMF 124
Query: 124 GVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS--KVPQFVR 181
GVT G+SVCC VHGF PY Y++ PQ F + L M + R++ + + V
Sbjct: 125 GVTELGNSVCCHVHGFNPYLYVTAPQNFNEHHCKLFKEALNKAMLKDMRSNPENIQEAVL 184
Query: 182 HIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNV 241
+E + K+++ Y + FLKI VALP +VA C+ +++ L + +ESN+
Sbjct: 185 AVERLYKQNMYGYTGNEKSLFLKITVALPRLVARCKKVVEEETILSEFN-HCYSAFESNI 243
Query: 242 LFALRFMIDCNIVGGNWIEVPVGKYRKTAKT------LSYCQLEFDCLYSDIISRHPEGE 295
F +RFM+D ++VG +WIE+P ++ S CQLE D + I+ P+GE
Sbjct: 244 DFDIRFMVDTSVVGCSWIELPPKTWKLRQHNGHNLPFTSRCQLEVDIAWDAFIAHAPQGE 303
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
+SK+APFRILSFDIECAGRKG FPEP HDPVIQ+AN+ QGE +PF+RN+ TL +CAPI
Sbjct: 304 WSKIAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMAIRQGEAEPFLRNIFTLDTCAPI 363
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
VG V+SFE E+ +L W DF+R++DPD+ GYNI FD YLI +
Sbjct: 364 VGCQVLSFEKEQKMLEKWADFVRQLDPDIFTGYNINNFDFTYLINR 409
>gi|2827903|gb|AAB99910.1| DNA polymerase delta catalytic subunit [Mus musculus]
Length = 1105
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/618 (62%), Positives = 482/618 (77%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 483 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 543 YLLTRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVKS+++KG+LP+ILE
Sbjct: 601 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILEN 660
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 661 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 720
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 721 FGRQMIEKTKQLVESKYTVENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 780
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEF+KVY+PYLLISKKRYAGL +++ + DKMD KG+E VRRDNC LV N
Sbjct: 781 SSHFPSPIRLEFKKVYFPYLLISKKRYAGLLFSSRSDAHDKMDCKGLEAVRRDNCPLVAN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 841 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 901 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 960
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G + F KR+ CIGC+++I +
Sbjct: 961 AKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGFLAFTKRRNCCIGCRSVIDHQ 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + + R WTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1021 GAVCKFCQPRESELYQKEVSHLNAWKNGSLRFWTQCQRCQGSLHEDVICTSRDCPIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1081 KKVRKDLEDQERLLQRFG 1098
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 212/333 (63%), Gaps = 6/333 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPL--SSGSAAIIRIFGVTREGHS 131
+W RP L + S + ++FQQL+ID+ +G + S S I+R FGVT EG S
Sbjct: 76 RWRRPTLRALDPS-TEPLIFQQLEIDHYVGSAPPLPEGPPPSRNSVPILRAFGVTDEGFS 134
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC + GF PYFY P G G + +S Q L + R K V IE+ +
Sbjct: 135 VCCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIELCSRE 194
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
S+ Y PFL+I +ALP ++A R +L++G+++ GLG SF YE+NV F +RFM+
Sbjct: 195 SMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEIRFMV 254
Query: 250 DCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+LSFD
Sbjct: 255 DADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRVLSFD 314
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D
Sbjct: 315 IECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEREED 374
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW DFI +DPDV+ GYNI FDLPYLI +
Sbjct: 375 LLQAWADFILAMDPDVITGYNIQNFDLPYLISR 407
>gi|324120720|dbj|BAJ78751.1| DNA polymerase delta catalytic subunit [Euborellia plebeja]
Length = 1078
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/615 (62%), Positives = 478/615 (77%), Gaps = 7/615 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIIS+LQNGN +TRRRLA+YCLKDA LP RLLDKLM NY+EM+RVTGV ++
Sbjct: 464 QKEDVHHSIISELQNGNEQTRRRLAIYCLKDAILPMRLLDKLMAFINYMEMSRVTGVSLA 523
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ +KV+SQLLR AK + ++P+ AG ++ +EGATV+E R G+Y KPIATLD
Sbjct: 524 SLLTRGQQVKVVSQLLRHAKPRGFLMPSHTSAGQDE-QFEGATVIEPRRGYYAKPIATLD 582
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TLV P R + + P+ + +TP+ FVKS ++KG+LPEILE
Sbjct: 583 FSSLYPSIMMAHNLCYTTLV-PVAKRNI-VQPDQITQTPANNFFVKSTVRKGLLPEILES 640
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AKADLK+ DP K VLDGRQLALKISANSVYGFTGA VG+LPC+EISSSVT+
Sbjct: 641 LLAARKQAKADLKKETDPFRKQVLDGRQLALKISANSVYGFTGAQVGRLPCLEISSSVTA 700
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGRQMIE TK+ VE K+ GY H++ VIYGDTDSVMVQFGV + AM+LG+EAAD++
Sbjct: 701 YGRQMIERTKQEVEAKYNIANGYPHDSMVIYGDTDSVMVQFGVEDIREAMRLGKEAADFV 760
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FIKPIKLEFEKVYYPYLLI+KKRYAGLY+T PEK DKMD KGIETVRRDNC LV ++
Sbjct: 761 SDKFIKPIKLEFEKVYYPYLLINKKRYAGLYFTRPEKHDKMDCKGIETVRRDNCPLVASI 820
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ + L K+LVDRD GAV +VK ISDLL NR+D+S LV+TK L + DY K AHVEL
Sbjct: 821 MNKSLEKLLVDRDPDGAVAFVKQMISDLLCNRIDISQLVVTKELARA--DYAGKQAHVEL 878
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRDA TAP +GDRVPYV I AK AY + EDPIYVLENNIPID +YYLENQ+S
Sbjct: 879 ANKMKKRDAGTAPKLGDRVPYVFIAGAKNTPAYLKVEDPIYVLENNIPIDFNYYLENQLS 938
Query: 880 KPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-SNGT 937
KPLLRIFEPIL + A LL GDHTR+ ++ T + F K++ +C+GCK ++ +
Sbjct: 939 KPLLRIFEPILGDRAESILLKGDHTRTKTLQTSRVGALAAFTKKKETCLGCKTVLETKDA 998
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LC +C +E +Y + + ++ LE F RLWTQCQ CQGSLH++V+CT+RDCPIFY RKK
Sbjct: 999 LCKYCLCKEDSIYLRELDKLSHLESQFSRLWTQCQNCQGSLHEEVICTNRDCPIFYLRKK 1058
Query: 998 AQKDMAEAKLQLDRW 1012
Q D+ + + R+
Sbjct: 1059 IQLDLTTHEKAIQRF 1073
Score = 305 bits (781), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/350 (41%), Positives = 223/350 (63%), Gaps = 11/350 (3%)
Query: 54 EESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLS 113
EE++ + D+E + + W+RPPL S ++ I+FQ +DID+ IG + +
Sbjct: 48 EEAIDINDVEIQHN-------WSRPPLPS-LNNKTDEIIFQVIDIDHYIGSAQANMPGAQ 99
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGR-MREANR 172
SG ++RI+GVT+ G+S+CC HG+ PYFY++ P D F + L M +
Sbjct: 100 SGPVPVMRIYGVTQNGNSICCHTHGYSPYFYVTAPPKFTDRDCQPFMEALNKVVMADIRY 159
Query: 173 NS-KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
N+ KV Q + ++++Q+ ++ Y + + FLKI VALPTM+ +C+ ++++ G
Sbjct: 160 NTYKVEQAILSVDIIQRFNMYIYSGDQPETFLKITVALPTMIPACKRLMEKQDIYPGQS- 218
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRH 291
+ +E+N+ F +RFM+D I G WI +P K+ A + CQ E + + +I+
Sbjct: 219 HHYRFFETNIDFDIRFMVDTEISGCCWITLPATKWSTMAYPTTRCQFECNIAWDQLIAHA 278
Query: 292 PEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKS 351
PEGE+SK+APFRILSFDIECAGRKG FPEP HDPVIQ+A++V QG++ PFI+NV+TL +
Sbjct: 279 PEGEWSKVAPFRILSFDIECAGRKGIFPEPEHDPVIQIASVVQEQGQRAPFIKNVLTLNT 338
Query: 352 CAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
CAPI+ V SF++E ++L W F+R+VDPD++ GYNI FD+PYL+ +
Sbjct: 339 CAPILDAQVFSFKSESELLDQWAKFVRQVDPDIITGYNINNFDMPYLLNR 388
>gi|24664937|ref|NP_524099.2| DNA-polymerase-delta [Drosophila melanogaster]
gi|13124718|sp|P54358.2|DPOD1_DROME RecName: Full=DNA polymerase delta catalytic subunit
gi|7294203|gb|AAF49555.1| DNA-polymerase-delta [Drosophila melanogaster]
gi|21064603|gb|AAM29531.1| RE60511p [Drosophila melanogaster]
Length = 1092
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/624 (62%), Positives = 478/624 (76%), Gaps = 12/624 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLA+YCLKDAYLP RLL+KLM I NY+EMARVTGVP+
Sbjct: 469 QKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLEKLMAIVNYMEMARVTGVPLE 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKVLSQLLRKAK K ++P+ GS++ YEGATV+E + G+Y PI+TLD
Sbjct: 529 SLLTRGQQIKVLSQLLRKAKTKGFIMPSYTSQGSDE-QYEGATVIEPKRGYYADPISTLD 587
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKL----NLPPECVNKTPSGETFVKSNLQKGILPE 575
FASLYPSIMMA+NLCY+TLV KL NL + V +TP+ FVKS +++G+LPE
Sbjct: 588 FASLYPSIMMAHNLCYTTLVLGGTREKLRQQENLQDDQVERTPANNYFVKSEVRRGLLPE 647
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
ILE LLAARKRAK DLK DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS
Sbjct: 648 ILESLLAARKRAKNDLKVETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISG 707
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SVT+YGR MIE TK VE +T GYE+NA VIYGDTDSVMV FGV T+E +M+LGREA
Sbjct: 708 SVTAYGRTMIEMTKNEVESHYTQANGYENNAVVIYGDTDSVMVNFGVKTLERSMELGREA 767
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A+ +S F+ PIKLEFEKVYYPYLLI+KKRYAGLY+T P+ +DKMD KGIETVRRDN L
Sbjct: 768 AELVSSKFVHPIKLEFEKVYYPYLLINKKRYAGLYFTRPDTYDKMDCKGIETVRRDNSPL 827
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V NL+ CL K+L++RD GAV YVK I+DLL NR+D+S LVITK L KT DY K A
Sbjct: 828 VANLMNSCLQKLLIERDPDGAVAYVKQVIADLLCNRIDISHLVITKELAKT--DYAAKQA 885
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
HVELA +M+KRD TAP +GDRVPYVI AAK AY+++EDP+YVLEN++PID YYLE
Sbjct: 886 HVELAAKMKKRDPGTAPKLGDRVPYVICAAAKNTPAYQKAEDPLYVLENSVPIDATYYLE 945
Query: 876 NQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS 934
Q+SKPLLRIFEPIL NA LL G+HTR+ ++ T G+ F ++ SC+GCK+L+
Sbjct: 946 QQLSKPLLRIFEPILGDNAESILLKGEHTRTRTVVTSKVGGLAGFMTKKTSCLGCKSLMP 1005
Query: 935 NG----TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
G LC HC+ R +ELY K V +ELE F RLWT+CQ CQ SLH++V+C++RDCP
Sbjct: 1006 KGYEQACLCPHCEPRMSELYQKEVGAKRELEETFSRLWTECQRCQESLHEEVICSNRDCP 1065
Query: 991 IFYRRKKAQKDMAEAKLQLDRWNF 1014
IFY R+K + D+ + ++ R+
Sbjct: 1066 IFYMRQKVRMDLDNQEKRVLRFGL 1089
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 230/385 (59%), Gaps = 13/385 (3%)
Query: 25 QATTPTTPVIDDEFLDEDVFLDETLLPED-EESLILRDIEQRQDFASRLAKWARPPLSSG 83
A P P DDE + + L ED +++L++ D + Q + R W+RPP
Sbjct: 14 HAKKPRNP-DDDEEMGFEAELAAFENSEDMDQTLLMGDGPENQTTSER---WSRPPPPEL 69
Query: 84 YVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYF 143
S+ ++ FQQLD++ +G + G ++R+FGVT EG+SVCC VHGF PYF
Sbjct: 70 DPSK-HNLEFQQLDVENYLGQPLPGMPGAQIGPVPVVRMFGVTMEGNSVCCHVHGFCPYF 128
Query: 144 YISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQP 201
YI P + L+ ++ RN+K V + V +E+V+K +I Y K Q
Sbjct: 129 YIEAPSQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVELVEKLNIHGYNGDKKQR 188
Query: 202 FLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV 261
++KI V LP VA+ +L + + + + + +E+N+ F +RFM+D ++VG NWIE+
Sbjct: 189 YIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFDIRFMVDTDVVGCNWIEL 248
Query: 262 PVGKYR---KTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKG 316
P+G +R +K L S CQ+E D + IS PEGE+SK+APFRILSFDIECAGRKG
Sbjct: 249 PMGHWRIRNSHSKPLPESRCQIEVDVAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKG 308
Query: 317 HFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDF 376
FPE DPVIQ+AN+V QGE++PFIRNV TL CAPI+G V+ + E +L W F
Sbjct: 309 IFPEAKIDPVIQIANMVIRQGEREPFIRNVFTLNECAPIIGSQVLCHDKETQMLDKWSAF 368
Query: 377 IREVDPDVMIGYNICKFDLPYLIEK 401
+REVDPD++ GYNI FD PYL+ +
Sbjct: 369 VREVDPDILTGYNINNFDFPYLLNR 393
>gi|195590609|ref|XP_002085037.1| GD12524 [Drosophila simulans]
gi|194197046|gb|EDX10622.1| GD12524 [Drosophila simulans]
Length = 1096
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/622 (62%), Positives = 478/622 (76%), Gaps = 12/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLA+YCLKDAYLP RLL+KLM I NY+EMARVTGVP+
Sbjct: 469 QKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLEKLMAIVNYMEMARVTGVPLE 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKVLSQLLRKAK K ++P+ GS++ YEGATV+E + G+Y PI+TLD
Sbjct: 529 SLLTRGQQIKVLSQLLRKAKTKGFIMPSYTSQGSDE-QYEGATVIEPKRGYYADPISTLD 587
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKL----NLPPECVNKTPSGETFVKSNLQKGILPE 575
FASLYPSIMMA+NLCY+TLV KL NL + V +TP+ FVKS +++G+LPE
Sbjct: 588 FASLYPSIMMAHNLCYTTLVLGGTREKLRQQENLQDDQVERTPANNYFVKSEVRRGLLPE 647
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
ILE LLAARKRAK DLK DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS
Sbjct: 648 ILESLLAARKRAKNDLKVETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISG 707
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SVT+YGR MIE TK VE +T GYE+NA VIYGDTDSVMV FGV T+E +M+LGREA
Sbjct: 708 SVTAYGRTMIELTKNEVESHYTQANGYENNAVVIYGDTDSVMVNFGVKTLERSMELGREA 767
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A+ +S F+ PIKLEFEKVYYPYLLI+KKRYAGLY+T P+ +DKMD KGIETVRRDN L
Sbjct: 768 AELVSSKFVHPIKLEFEKVYYPYLLINKKRYAGLYFTRPDTYDKMDCKGIETVRRDNSPL 827
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V NL+ CL K+L++RD GAV YVK I+DLL NR+D+S LVITK L KT DY K A
Sbjct: 828 VANLMNSCLQKLLIERDPDGAVAYVKQVIADLLCNRIDISHLVITKELAKT--DYAAKQA 885
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
HVELA +M+KRD TAP +GDRVPYVI AAK AY+++EDP+YVLEN++PID YYLE
Sbjct: 886 HVELAAKMKKRDPGTAPKLGDRVPYVICAAAKNTPAYQKAEDPLYVLENSVPIDATYYLE 945
Query: 876 NQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS 934
Q+SKPLLRIFEPIL NA LL G+HTR+ ++ T G+ F ++ SC+GCK+L+
Sbjct: 946 QQLSKPLLRIFEPILGDNAESILLKGEHTRTRTVVTSKVGGLAGFMTKKTSCLGCKSLMP 1005
Query: 935 NG----TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
G LC HC+ R +ELY K V +ELE F RLWT+CQ CQ SLH++V+C++RDCP
Sbjct: 1006 KGYKQACLCPHCEPRMSELYQKEVGAKRELEETFSRLWTECQRCQESLHEEVICSNRDCP 1065
Query: 991 IFYRRKKAQKDMAEAKLQLDRW 1012
IFY R+K + D+ + ++ R+
Sbjct: 1066 IFYMRQKVRMDLDNQEKRVMRF 1087
Score = 303 bits (775), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 230/385 (59%), Gaps = 13/385 (3%)
Query: 25 QATTPTTPVIDDEFLDEDVFLDETLLPED-EESLILRDIEQRQDFASRLAKWARPPLSSG 83
A P P DDE + + L ED +++L++ D + Q + R W+RPP
Sbjct: 14 HAKKPRNP-DDDEEMGFEAELAAFENSEDMDQTLLMGDGPENQTTSER---WSRPPPPEL 69
Query: 84 YVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYF 143
S+ ++ FQQLD++ +G + G ++R+FGVT EG+SVCC VHGF PYF
Sbjct: 70 DPSK-HNLEFQQLDVENYLGQPLPGMPGAQIGPVPVVRMFGVTMEGNSVCCHVHGFCPYF 128
Query: 144 YISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQP 201
YI P + L+ ++ RN+K V + V +E+V+K +I Y K Q
Sbjct: 129 YIEAPNQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVELVEKLNIHGYNGDKKQR 188
Query: 202 FLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV 261
++KI V LP VA+ +L + + + + + +E+N+ F +RFM+D ++VG NWIE+
Sbjct: 189 YIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFDIRFMVDTDVVGCNWIEL 248
Query: 262 PVGKYR---KTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKG 316
P+G +R +K L S CQ+E D + IS PEGE+SK+APFRILSFDIECAGRKG
Sbjct: 249 PMGHWRIRNSHSKPLPESRCQIEVDVAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKG 308
Query: 317 HFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDF 376
FPE DPVIQ+AN+V QGE++PFIRNV TL CAPI+G V+ + E +L W F
Sbjct: 309 IFPEAKMDPVIQIANMVIRQGEREPFIRNVFTLNECAPIIGSQVLCHDKETQMLDKWSAF 368
Query: 377 IREVDPDVMIGYNICKFDLPYLIEK 401
+REVDPD++ GYNI FD PYLI +
Sbjct: 369 VREVDPDILTGYNINNFDFPYLINR 393
>gi|391325933|ref|XP_003737481.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Metaseiulus
occidentalis]
Length = 1088
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/622 (63%), Positives = 485/622 (77%), Gaps = 11/622 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNG+ +TRRRLAVYCLKDA LP RLL+KLM I NY+EMARVTGVP+S
Sbjct: 469 QKEDVQHSIITDLQNGDEQTRRRLAVYCLKDALLPLRLLEKLMCIINYMEMARVTGVPLS 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
+LL RGQ IKV+SQLLRKA++++L++P + Q G + + GATV+E G+Y PIATL
Sbjct: 529 YLLLRGQQIKVVSQLLRKAREQDLILPVINVQTGDD---FTGATVIEPTRGYYSVPIATL 585
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DF+SLYPSIMMA+NLCY+TL+ + R+ L P+ KTPSG+ FVK++ +KG+LP+ILE
Sbjct: 586 DFSSLYPSIMMAHNLCYTTLLNDQKMRE-QLKPDQYIKTPSGDYFVKASCRKGLLPDILE 644
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL+ARK+AK DLK KDP K VLDGRQLALKISANSVYGFTGA VG+LPC+ IS S T
Sbjct: 645 SLLSARKKAKTDLKNEKDPFRKKVLDGRQLALKISANSVYGFTGAQVGKLPCLAISQSTT 704
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GRQMI+ T + VE K+ G++++A+VIYGDTDSVM++FGV ++ AM LGREAA+Y
Sbjct: 705 AFGRQMIDETAREVEAKYCQKNGFQYDAKVIYGDTDSVMIKFGVDKLDEAMDLGREAAEY 764
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ F+KPIKLEFEKVYYPYLLI+KKRYAGL +T P+K DKMD KGIETVRRDNC LV N
Sbjct: 765 VTSKFVKPIKLEFEKVYYPYLLINKKRYAGLLYTRPDKHDKMDCKGIETVRRDNCPLVAN 824
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL KIL+++D GAV + K TI+DLL NR+D+S LVITK LTKT ++Y K AHVE
Sbjct: 825 LINTCLEKILIEKDPKGAVNFAKQTIADLLCNRIDISQLVITKELTKTEEEYAGKQAHVE 884
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA RM KRDA +AP +GDRVPYVII A+KG AY +SEDPIYVLENNIPIDT YYLENQI
Sbjct: 885 LANRMMKRDAGSAPKLGDRVPYVIIAASKGTAAYLKSEDPIYVLENNIPIDTQYYLENQI 944
Query: 879 SKPLLRIFEPIL--KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS-- 934
SKPLLRIFEPIL A+ ELL GDHTRS ++ + F K++ +CIGCKA++S
Sbjct: 945 SKPLLRIFEPILGESKAASELLRGDHTRSKAVVHSKVGALAMFTKKKATCIGCKAVLSSN 1004
Query: 935 --NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
NG +C HC R E+Y V + +LE F +LWTQCQ C GSLH++VLCTSRDCPIF
Sbjct: 1005 RENGAVCEHCDKRANEVYMTEVVSLNKLEEKFSKLWTQCQRCTGSLHEEVLCTSRDCPIF 1064
Query: 993 YRRKKAQKDMAEAKLQLDRWNF 1014
Y RKK Q D+ + + +DR+
Sbjct: 1065 YMRKKVQMDLQDQQKLMDRFKL 1086
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 156/375 (41%), Positives = 226/375 (60%), Gaps = 22/375 (5%)
Query: 33 VIDDEFLDEDVF--LDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQS 90
+++D +E +F +D +L+PEDE A+W RP + ++ Q
Sbjct: 35 LMEDCEAEEKIFSQVDPSLVPEDE---------------VMSARWKRPE-APALDTREQK 78
Query: 91 IMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQG 150
+ FQQ+D+D+ IG + ++SG + R+FG T EGHSV C VHGF PYFY+ P G
Sbjct: 79 LEFQQVDLDHYIGPIKAGMTTVTSGLVPVTRVFGSTEEGHSVLCHVHGFLPYFYVQAPPG 138
Query: 151 MGPDDISHFHQIL-EGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVAL 209
+ F + L + + + N V + V + E+V K++I Y + +PF+KI VAL
Sbjct: 139 FNKGSLEEFRKNLNQAVLGDMKGNKNVAEAVLNCELVDKQNIYGYTDRGLEPFIKITVAL 198
Query: 210 PTMVASCRGILD-RGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY-- 266
P ++A + +L+ + + ++ +E+N+ F +RFM+D VG +WI + GKY
Sbjct: 199 PRLIAPSKRLLEGASVSIRSHPSFNYRPFEANIDFEIRFMVDTQTVGCSWITLSPGKYTL 258
Query: 267 RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPV 326
R + S CQ E D + D IS EGE++K+APFR+LSFDIECAGRKG FPEP D V
Sbjct: 259 RPEGEKTSLCQYEADINWKDFISHPAEGEYAKVAPFRVLSFDIECAGRKGIFPEPNKDRV 318
Query: 327 IQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMI 386
IQ+A++V QG+K PFIRN+MTL +CAPI GV+VMSF+TE +L W FIR VDPD++
Sbjct: 319 IQIASMVVRQGQKDPFIRNIMTLDTCAPIPGVEVMSFDTESKMLDQWAAFIRLVDPDIIT 378
Query: 387 GYNICKFDLPYLIEK 401
GYNI FD YL+ +
Sbjct: 379 GYNILNFDYTYLVNR 393
>gi|194873189|ref|XP_001973157.1| GG13508 [Drosophila erecta]
gi|190654940|gb|EDV52183.1| GG13508 [Drosophila erecta]
Length = 1092
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/624 (62%), Positives = 479/624 (76%), Gaps = 12/624 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLA+YCLKDAYLP RLL+KLM I NY+EMARVTGVP+
Sbjct: 469 QKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLEKLMAIVNYMEMARVTGVPLE 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKVLSQLLRKAK K ++P+ GS++ YEGATV+E + G+Y PI+TLD
Sbjct: 529 SLLTRGQQIKVLSQLLRKAKTKGFIMPSYTSQGSDE-QYEGATVIEPKRGYYADPISTLD 587
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKL----NLPPECVNKTPSGETFVKSNLQKGILPE 575
FASLYPSIMMA+NLCY+TLV KL NL + V +TP+ FVKS +++G+LPE
Sbjct: 588 FASLYPSIMMAHNLCYTTLVLGGTREKLREQENLQDDQVERTPANNYFVKSEVRRGLLPE 647
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
ILE LLAARKRAK DLK DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS
Sbjct: 648 ILESLLAARKRAKNDLKVETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISG 707
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SVT+YGR MIE TK VE ++ GYE+NA VIYGDTDSVMV FGV T+E +M+LGREA
Sbjct: 708 SVTAYGRTMIEMTKNEVESHYSQANGYENNAVVIYGDTDSVMVNFGVKTLERSMELGREA 767
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A+ +S F+ PIKLEFEKVYYPYLLI+KKRYAGLY+T P+ +DKMD KGIETVRRDN L
Sbjct: 768 AELVSSKFVHPIKLEFEKVYYPYLLINKKRYAGLYFTRPDAYDKMDCKGIETVRRDNSPL 827
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V NL+ CL K+L++RD GAV YVK I+DLL NR+D+S LVITK L KT DY K A
Sbjct: 828 VANLMNSCLQKLLIERDPDGAVAYVKQVIADLLCNRIDISHLVITKELAKT--DYAAKQA 885
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
HVELA +M+KRD TAP +GDRVPYVI AAK AY+++EDP+YVLEN++PID YYLE
Sbjct: 886 HVELAAKMKKRDPGTAPKLGDRVPYVICAAAKNTPAYQKAEDPLYVLENSVPIDATYYLE 945
Query: 876 NQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS 934
Q+SKPLLRIFEPIL NA LL G+HTR+ ++ T G+ F ++ +C+GCK+L+
Sbjct: 946 QQLSKPLLRIFEPILGDNAESILLKGEHTRTRTVVTSKVGGLAGFMTKKTACLGCKSLMP 1005
Query: 935 NG----TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
G +LC HC+ R +ELY K V +ELE F RLWT+CQ CQ SLH++V+C++RDCP
Sbjct: 1006 KGYEQASLCPHCEPRMSELYQKEVGAKRELEETFSRLWTECQRCQESLHEEVICSNRDCP 1065
Query: 991 IFYRRKKAQKDMAEAKLQLDRWNF 1014
IFY R+K + D+ + ++ R+
Sbjct: 1066 IFYMRQKVRMDLDNQEKRVMRFGL 1089
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/384 (41%), Positives = 229/384 (59%), Gaps = 11/384 (2%)
Query: 25 QATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGY 84
A P P DDE E + +++L++ D + Q + R W+RPP
Sbjct: 14 HAKKPRNPDEDDEMGFEAELAAFENSEDMDQTLLMGDGPENQTTSER---WSRPPPPELD 70
Query: 85 VSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFY 144
S+ ++ FQQLD++ +G + G ++R+FGVT EG+SVCC VHGF PYFY
Sbjct: 71 PSK-HNLEFQQLDVENYLGQPLLGMPGAQIGPVPVVRMFGVTMEGNSVCCHVHGFCPYFY 129
Query: 145 ISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPF 202
I P+ + L+ ++ RN+K V + V +E+V+K +I Y + Q +
Sbjct: 130 IEAPRQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVELVEKLNIHGYNGDQKQRY 189
Query: 203 LKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP 262
+KI V LP VA+ +L + + + + + +E+N+ F +RFM+D ++VG NWIE+P
Sbjct: 190 IKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFDIRFMVDTDVVGCNWIELP 249
Query: 263 VGKYRKT---AKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH 317
+G +R+ +K L S CQ+E D + IS PEGE+SK+APFRILSFDIECAGRKG
Sbjct: 250 MGHWRRRNTHSKPLPESRCQIEVDVAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGI 309
Query: 318 FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFI 377
FPE DPVIQ+AN+V QGE++PFIRNV TL CAPI+G V+ + E +L W F+
Sbjct: 310 FPEAKMDPVIQIANMVIRQGEREPFIRNVFTLNECAPIIGSQVLCHDKETQMLDKWSAFV 369
Query: 378 REVDPDVMIGYNICKFDLPYLIEK 401
REVDPD++ GYNI FD PYLI +
Sbjct: 370 REVDPDILTGYNINNFDFPYLINR 393
>gi|195477860|ref|XP_002086418.1| GE23127 [Drosophila yakuba]
gi|194186208|gb|EDW99819.1| GE23127 [Drosophila yakuba]
Length = 1092
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/624 (62%), Positives = 478/624 (76%), Gaps = 12/624 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLA+YCLKDAYLP RLL+KLM I NY+EMARVTGVP+
Sbjct: 469 QKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLEKLMAIVNYMEMARVTGVPLE 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKVLSQLLRKAK K ++P+ GS++ YEGATV+E + G+Y PI+TLD
Sbjct: 529 SLLTRGQQIKVLSQLLRKAKTKGFIMPSYTSQGSDE-QYEGATVIEPKRGYYADPISTLD 587
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKL----NLPPECVNKTPSGETFVKSNLQKGILPE 575
FASLYPSIMMA+NLCY+TLV KL NL + V +TP+ FVKS +++G+LPE
Sbjct: 588 FASLYPSIMMAHNLCYTTLVLGGTREKLREQENLQDDQVERTPANNYFVKSEVRRGLLPE 647
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
ILE LLAARKRAK DLK DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS
Sbjct: 648 ILESLLAARKRAKNDLKVETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISG 707
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SVT+YGR MIE TK VE +T GYE+NA VIYGDTDSVMV FGV T+E +M+LGREA
Sbjct: 708 SVTAYGRTMIEMTKNEVESHYTQANGYENNAVVIYGDTDSVMVNFGVKTLERSMELGREA 767
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A+ +S F+ PIKLEFEKVYYPYLLI+KKRYAGLY+T P+ +DKMD KGIETVRRDN L
Sbjct: 768 AELVSSKFVHPIKLEFEKVYYPYLLINKKRYAGLYFTRPDTYDKMDCKGIETVRRDNSPL 827
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V NL+ CL K+L++RD GAV YVK I+DLL NR+D+S LVITK L KT DY K A
Sbjct: 828 VANLMNSCLQKLLIERDPDGAVAYVKQVIADLLCNRIDISHLVITKELAKT--DYAAKQA 885
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
HVELA +M+KRD TAP +GDRVPYVI AAK AY+++EDP+YVLEN++PID YYLE
Sbjct: 886 HVELAAKMKKRDPGTAPKLGDRVPYVICAAAKNTPAYQKAEDPLYVLENSVPIDATYYLE 945
Query: 876 NQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS 934
Q+SKPLLRIFEPIL NA LL G+HTR+ ++ T G+ F ++ +C+GCK+L+
Sbjct: 946 QQLSKPLLRIFEPILGDNAESILLKGEHTRTRTVVTSKVGGLAGFMTKKTACLGCKSLMP 1005
Query: 935 NG----TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
G LC HC+ R +ELY K V +ELE F RLWT+CQ CQ SLH++V+C++RDCP
Sbjct: 1006 KGYEQACLCPHCEPRMSELYQKEVGAKRELEETFSRLWTECQRCQESLHEEVICSNRDCP 1065
Query: 991 IFYRRKKAQKDMAEAKLQLDRWNF 1014
IFY R+K + D+ + ++ R+
Sbjct: 1066 IFYMRQKVRMDLDNQEKRVMRFGL 1089
Score = 302 bits (774), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 160/384 (41%), Positives = 228/384 (59%), Gaps = 11/384 (2%)
Query: 25 QATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGY 84
A P P D+E E + +++L++ D + Q + R W+RPP
Sbjct: 14 HAKKPRNPDEDEEMGFEAELAAFENSEDMDQTLLMGDGPENQTTSER---WSRPPPPELD 70
Query: 85 VSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFY 144
S+ ++ FQQLD++ +G + G ++R+FGVT EG+SVCC VHGF PYFY
Sbjct: 71 PSK-HNLEFQQLDVENYLGQPLPGMPGAQIGPVPVVRMFGVTMEGNSVCCHVHGFCPYFY 129
Query: 145 ISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPF 202
I P+ + L+ ++ RN+K V + V +E+V+K +I Y K Q +
Sbjct: 130 IEAPRQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVELVEKLNIHGYNGDKKQRY 189
Query: 203 LKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP 262
+KI V LP VA+ +L + + + + + +E+N+ F +RFM+D ++VG NWIE+P
Sbjct: 190 IKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFDIRFMVDTDVVGCNWIELP 249
Query: 263 VGKYR---KTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH 317
+G +R +K L S CQ+E D + IS PEGE+SK+APFRILSFDIECAGRKG
Sbjct: 250 MGHWRIRNSHSKPLPESRCQIEVDVAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGI 309
Query: 318 FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFI 377
FPE DPVIQ+AN+V QGE++PFIRNV TL CAPI+G V+ + E +L W F+
Sbjct: 310 FPEAKMDPVIQIANMVIRQGEREPFIRNVFTLNQCAPIIGSQVLCHDKETQMLDKWSAFV 369
Query: 378 REVDPDVMIGYNICKFDLPYLIEK 401
REVDPD++ GYNI FD PYLI +
Sbjct: 370 REVDPDILTGYNINNFDFPYLINR 393
>gi|254567878|ref|XP_002491049.1| Catalytic subunit of DNA polymerase delta [Komagataella pastoris
GS115]
gi|238030846|emb|CAY68769.1| Catalytic subunit of DNA polymerase delta [Komagataella pastoris
GS115]
gi|328352425|emb|CCA38824.1| DNA polymerase delta subunit 1 [Komagataella pastoris CBS 7435]
Length = 1093
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/625 (61%), Positives = 486/625 (77%), Gaps = 15/625 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNG+AETRRRLAVYCLKDAYLP RL +KLM + NY EMARVTGVP S
Sbjct: 469 QKEDVQHSIITDLQNGDAETRRRLAVYCLKDAYLPLRLAEKLMCLVNYTEMARVTGVPFS 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ IKV+SQL RK + ++VIPN+K + S YEGATV++ G+Y+ P+ATLD
Sbjct: 529 FLLSRGQQIKVISQLFRKCLELDIVIPNMK-SDSVNEEYEGATVIDPVRGYYDVPVATLD 587
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+NLCY+TL+ +L L + TP+G+ FVK +L+KGILP IL+
Sbjct: 588 FASLYPSIMMAHNLCYTTLLNKPTIDRLGLVKDKDYILTPNGDFFVKEDLRKGILPTILQ 647
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARK+AK DLK DP +K VL+GRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT
Sbjct: 648 ELLAARKKAKYDLKTETDPFKKQVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSVT 707
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GR+MIE TK+ V++++T GY+H+A+VIYGDTDSVMV+FG + MKLG EAA +
Sbjct: 708 AFGREMIEATKQAVQERYTIKNGYDHDAQVIYGDTDSVMVKFGENDLRKCMKLGEEAAAF 767
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PIKLEFEKVY+PYLLI+KKRYAGLYWTNP+K+DKMDTKGIETVRRDNC LV+N
Sbjct: 768 VSTIFKNPIKLEFEKVYFPYLLINKKRYAGLYWTNPDKYDKMDTKGIETVRRDNCRLVQN 827
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++T+ L +L RD+ GA +VK TI+DLL +R+DLS LVITK L++ DY K AHVE
Sbjct: 828 VITKVLEYMLELRDVEGAENFVKQTIADLLQDRVDLSQLVITKALSR--QDYAGKQAHVE 885
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRDA +AP +GDRV YVIIK + K YE+SEDP+YVLE+++PIDT+YYLENQ+
Sbjct: 886 LAERMRKRDAGSAPTLGDRVAYVIIKTS-STKNYEKSEDPLYVLEHSLPIDTNYYLENQL 944
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS--- 934
+KPL RIFEPIL + +K LLSG HTR++ ++ P G+M+FAK+ +C CK+ ++
Sbjct: 945 AKPLTRIFEPILGERRAKALLSGSHTRTVFVAAPKTGGLMRFAKKTNTCKNCKSPLTKSN 1004
Query: 935 ------NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRD 988
N LC++C + LY + +S + LE F +LWT+CQ CQGSLHQ+VLC++ D
Sbjct: 1005 CKSPNGNAALCNNCMDKAGSLYGEALSLMNSLETKFSKLWTECQRCQGSLHQEVLCSNND 1064
Query: 989 CPIFYRRKKAQKDMAEAKLQLDRWN 1013
CPIFY R KA+KD+ +L+RWN
Sbjct: 1065 CPIFYMRTKAKKDIIHQAEELERWN 1089
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 208/360 (57%), Gaps = 32/360 (8%)
Query: 52 EDEESLILRDIEQRQDFAS------RLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDS 105
++E S ++++E + A+ ++ W+RP L + + I+FQQLD +
Sbjct: 56 DNEPSTFIKELEDMDNEATSKSEEIQIQNWSRPELPK-FDPKKDDIIFQQLDAE------ 108
Query: 106 NRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEG 165
E+ ++ S+A R FGVT G++V C V GF+ YFY+ P+ + D+ F L+
Sbjct: 109 --EISHVNGHSSA--RFFGVTDAGNTVLCNVTGFDHYFYVGMPKALKESDLPGFTNYLKD 164
Query: 166 RMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-I 224
N IE+ K SI Y PFLKI+++ +++ R + G I
Sbjct: 165 EYVGVNT----------IEISFKESIWGYNNNTKLPFLKIIMSNSRLISRVRTGFENGSI 214
Query: 225 QL-DGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT--AKTLSYCQLEFD 281
Q D +T++ N+ + LR M+D + G WI++ KY ++ +S CQLE
Sbjct: 215 QYNDAFPPNGSITFD-NIQYLLRMMVDTKVSGMCWIKLQASKYTLVPPSQQVSTCQLELS 273
Query: 282 CLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQP 341
Y D++S EGEFSK+AP RILSFDIECAGRKG FPEP HDPVIQ+AN+V+ GE P
Sbjct: 274 VDYRDLVSLPIEGEFSKIAPLRILSFDIECAGRKGIFPEPEHDPVIQIANVVSRTGESTP 333
Query: 342 FIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
F+RNV T+ SCAPIVG + SFE E ++L WRDFI +VDPDV+IGYNI FD PYLI +
Sbjct: 334 FVRNVFTVNSCAPIVGSQIFSFEKEEELLRKWRDFIIKVDPDVIIGYNIANFDFPYLINR 393
>gi|194749801|ref|XP_001957325.1| GF10365 [Drosophila ananassae]
gi|190624607|gb|EDV40131.1| GF10365 [Drosophila ananassae]
Length = 1092
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/612 (63%), Positives = 473/612 (77%), Gaps = 12/612 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLA+YCLKDAYLP RLL+KLM I NY+EMARVTGVP+
Sbjct: 469 QKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLEKLMAIVNYMEMARVTGVPLE 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKA+ K ++P+ GS++ +EGATV+E + G+Y PI+TLD
Sbjct: 529 SLLTRGQQIKVMSQLLRKARTKGFIMPSYTSQGSDE-QFEGATVIEPKRGYYADPISTLD 587
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKL----NLPPECVNKTPSGETFVKSNLQKGILPE 575
FASLYPSIMMA+NLCY+TLV KL NL + V +TP+ FVKS +++G+LPE
Sbjct: 588 FASLYPSIMMAHNLCYTTLVLGGTREKLREQENLQDDQVERTPANNYFVKSEVRRGLLPE 647
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
ILE LLAARKRAK DLK DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS
Sbjct: 648 ILESLLAARKRAKNDLKVETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISG 707
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SVT+YGR MIE TK VE +T GYE NA VIYGDTDSVMV FGV T+E +M+LGREA
Sbjct: 708 SVTAYGRTMIEMTKNEVESHYTQANGYESNALVIYGDTDSVMVNFGVKTLERSMELGREA 767
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A+ +S F+ PIKLEFEKVYYPYLLI+KKRYAGLY+T PE +DKMD KGIETVRRDN L
Sbjct: 768 AELVSSKFVHPIKLEFEKVYYPYLLINKKRYAGLYFTRPETYDKMDCKGIETVRRDNSPL 827
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V NL+ CL K+L++RD GAV Y K I+DLL NR+D+S LVITK L KT DY K A
Sbjct: 828 VANLMNTCLQKLLIERDPDGAVAYAKQVIADLLCNRIDISHLVITKELAKT--DYAAKQA 885
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
HVELA +M+KRD TAP +GDRVPYVI AAK AY+++EDP+YVLEN++PID YYLE
Sbjct: 886 HVELAAKMKKRDPGTAPKLGDRVPYVICAAAKNTPAYQKAEDPLYVLENSVPIDATYYLE 945
Query: 876 NQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS 934
Q++KPLLRIFEPIL + A LL G+HTR+ ++ T G+ F ++ SC+GCK+L+
Sbjct: 946 QQLAKPLLRIFEPILGEKAESILLKGEHTRTRTVVTSKVGGLAGFMTKKTSCLGCKSLMP 1005
Query: 935 NG----TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
G LC HC+ R +ELY K V +ELEV F RLWT+CQ CQGSLH++V+C++RDCP
Sbjct: 1006 KGYEQACLCPHCEPRMSELYQKEVGAKRELEVSFSRLWTECQRCQGSLHEEVICSNRDCP 1065
Query: 991 IFYRRKKAQKDM 1002
IFY R+K + D+
Sbjct: 1066 IFYMRQKVRMDL 1077
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/393 (41%), Positives = 235/393 (59%), Gaps = 13/393 (3%)
Query: 17 KESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPED-EESLILRDIEQRQDFASRLAKW 75
K + P+ QA P P DDE +D + L ED +++L+L D + Q + R ++
Sbjct: 6 KFNGPSNGQAKRPRNP-DDDEEMDFESELAAFENSEDMDQTLLLGDGPENQQTSERWSRP 64
Query: 76 ARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCK 135
A P L S+ FQQLD++ G + G ++R+FGVT +G+SVCC
Sbjct: 65 APPKLDPAK----DSLEFQQLDVENYQGQPLPGMPGAQLGPVPVVRMFGVTMDGNSVCCH 120
Query: 136 VHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMY 193
VHGF PYFYI P+ Q L+ ++ RN+K V + V +E+V+K +I
Sbjct: 121 VHGFCPYFYIEAPKKFEERHCEKLQQALDQKVIADIRNNKDNVQEAVLMVELVEKLNIHG 180
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNI 253
Y K Q ++KI V LP VA+ +L + + + + + +E+N+ F +RFM+D ++
Sbjct: 181 YNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMAEIDFQDCRAFENNIDFDIRFMVDTSV 240
Query: 254 VGGNWIEVPVGKYR---KTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
VG NWIE+P G++R +K L S CQ+E D + IS PEGE++K+APFRILSFD
Sbjct: 241 VGCNWIELPKGEWRLRSSHSKPLPESRCQIEVDVAFDKFISHEPEGEWAKVAPFRILSFD 300
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPE DPVIQ+AN+V QGE++PFIRNV TL CAPI+G V+ + E
Sbjct: 301 IECAGRKGIFPEAKMDPVIQIANMVIRQGEREPFIRNVFTLDECAPIIGSQVLCHDKETQ 360
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L W F+REVDPD++ GYNI FD+PYL+ +
Sbjct: 361 LLDRWSAFVREVDPDILTGYNINNFDIPYLLNR 393
>gi|324120764|dbj|BAJ78773.1| DNA polymerase delta catalytic subunit [Stenopsyche marmorata]
Length = 1000
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/617 (62%), Positives = 479/617 (77%), Gaps = 7/617 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I+D+QN + +TRRRLA+YCLKDAYLP RLL+KLM I NY+EMARVTGVP++
Sbjct: 382 QKEDVHHSVITDMQNESDQTRRRLAMYCLKDAYLPLRLLNKLMCIINYMEMARVTGVPLA 441
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKAK ++P GS+ YEGATV++ G+Y PIATLD
Sbjct: 442 CLLNRGQQIKVVSQLLRKAKTSKYIMPAYHSQGSDD-QYEGATVIDPLKGYYSNPIATLD 500
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMA+NLCY+TL+ KLN+ + V +TPS FVKS ++KG+LPEILE
Sbjct: 501 FASLYPSIMMAHNLCYTTLLPNHMKEKLNITDDQVTRTPSNNMFVKSTVRKGLLPEILES 560
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLKE DP +++VLDGRQLALKISANSVYGFTGA VG+LPC+EISSSVTS
Sbjct: 561 LLGARKKAKADLKEETDPFKRSVLDGRQLALKISANSVYGFTGAQVGKLPCLEISSSVTS 620
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE ++T GY+ +A VIYGDTDSVMV FG ++E +MKLGR AA+++
Sbjct: 621 YGRSMIEQTKQEVEQRYTKANGYDEDAIVIYGDTDSVMVNFGTTSLEESMKLGRNAAEFV 680
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FIKPIKLEFEK Y+PYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDN LV NL
Sbjct: 681 SSKFIKPIKLEFEKCYFPYLLINKKRYAGLYFTKPDKYDKMDCKGIETVRRDNSPLVSNL 740
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
++ CL K+L+DRD GAV+Y K I+DLL NR+D+S LVITK L+K+ DY K AHVEL
Sbjct: 741 MSTCLQKVLIDRDPKGAVEYAKQIIADLLCNRIDISQLVITKELSKS--DYAAKQAHVEL 798
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD TAP +GDRVPYV+ AAK AY ++EDPIYVLEN+IPID YYL NQ+S
Sbjct: 799 AAKMKKRDPGTAPKLGDRVPYVLCSAAKNVPAYMKAEDPIYVLENSIPIDFDYYLHNQLS 858
Query: 880 KPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT- 937
KPLLR+FEPI + A +L GDH R+ ++ T + F K++ +CIGCKA++SN +
Sbjct: 859 KPLLRLFEPIYGDKAESMILKGDHIRTRAMVTSRVGALSAFTKKRETCIGCKAVLSNDSK 918
Query: 938 --LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LC HCK +E +L+ V +++ LE F RLWT+CQ CQGSLH++VLCTSRDCPIFY R
Sbjct: 919 NALCDHCKVKEPQLFGNEVLKLRLLENKFSRLWTECQRCQGSLHEEVLCTSRDCPIFYMR 978
Query: 996 KKAQKDMAEAKLQLDRW 1012
KK ++ + ++ R+
Sbjct: 979 KKVGIELDSQEKRIKRF 995
Score = 297 bits (760), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/320 (45%), Positives = 205/320 (64%), Gaps = 16/320 (5%)
Query: 106 NRELLPLSSGS----AAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQ 161
N E LP GS I+R+FG+T E +SVCC VHGF PYFY+S P+ +
Sbjct: 1 NGEPLPGMPGSQIAPVPIMRMFGITMERYSVCCHVHGFTPYFYVSVPESFKEETCHKLKS 60
Query: 162 ILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGI 219
L + R++K + + V + + Q +S+M Y K + +I VALP ++A+ + +
Sbjct: 61 TLNKAILNDLRSNKESIREAVLQVTLFQAKSLMNYTGDKENTYARIAVALPRLIAAAKRL 120
Query: 220 LDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR------KTAKTL 273
+++ L SF YESN+ F +RFM+D +VG +WIE+P GK+R K L
Sbjct: 121 IEKTPLEFHLMDPSF--YESNIDFDIRFMVDTTVVGCSWIELPAGKWRIRDSNIAPLKPL 178
Query: 274 SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLV 333
S CQ+E D ++ I+ PEG+++K+APFRILSFDIECAGR+G FPEP DPVIQ+AN+V
Sbjct: 179 SRCQIEVDVAWNGFIAHQPEGDWAKVAPFRILSFDIECAGRRGIFPEPQKDPVIQIANMV 238
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
QGE +PFIRNV TL +CAPIVG V+SF+TE+++L W +FIREVDPD++ GYNI F
Sbjct: 239 IRQGESEPFIRNVFTLNTCAPIVGSHVLSFQTEQEMLCKWSEFIREVDPDIITGYNINNF 298
Query: 394 DLPYLIEKEDVHHSIISDLQ 413
D PYLI++ HH + D +
Sbjct: 299 DFPYLIDR--AHHLKVKDFE 316
>gi|344299649|gb|EGW30002.1| DNA polymerase delta catalytic subunit [Spathaspora passalidarum NRRL
Y-27907]
Length = 1079
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/619 (61%), Positives = 480/619 (77%), Gaps = 10/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNG ETRRRLAVYCLKDA+LP RLLDKLM + NY EMARVTGVP S
Sbjct: 460 QKEDVQHSIITDLQNGTKETRRRLAVYCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFS 519
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK +++++IPN+K G+ + YEGATV+E G+Y+ PIATLD
Sbjct: 520 YLLSRGQQIKVISQLFRKCLEEDIIIPNMKSEGTNE-EYEGATVIEPIRGYYDVPIATLD 578
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL++ + L E +TP+G+ FVKS+ ++GILP IL E
Sbjct: 579 FSSLYPSIMMAHNLCYTTLLSKSAIQAYGLTEEDYTRTPNGDFFVKSHKRQGILPTILNE 638
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLK+ DP +K VL+GRQLALKISANSVYGFTGAT+G+LPC+ ISSSVT+
Sbjct: 639 LLTARKKAKADLKKETDPFKKDVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSVTA 698
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK V++ ++ G+ +A+VIYGDTDSVMV+FG +E MKLG EAA+Y+
Sbjct: 699 FGREMIEKTKNEVQEYYSKKNGHPFDAQVIYGDTDSVMVKFGYQDLETCMKLGEEAANYV 758
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PIKLEFEKVYYPYLLI+KKRYAGLYWT P+KFDKMDTKGIETVRRDNC LV+N+
Sbjct: 759 STKFKSPIKLEFEKVYYPYLLINKKRYAGLYWTRPDKFDKMDTKGIETVRRDNCRLVQNV 818
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+T+ L IL +RD+ A ++VK TI+DLL NR+DLS LVITK K DY K AHVEL
Sbjct: 819 ITKVLQFILEERDVEKAQRFVKQTIADLLQNRVDLSQLVITKAYAK--HDYSAKQAHVEL 876
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERM+KRD +AP +GDRV YVI+ K YE+SEDP+YVLEN++PID YYL+ Q++
Sbjct: 877 AERMKKRDPGSAPTLGDRVAYVIVNTGSD-KNYEKSEDPLYVLENSLPIDVKYYLDQQLT 935
Query: 880 KPLLRIFEPILKNA-SKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SN 935
KPL RIF PIL + +KELL+G HTR+I +S P G+M+FAK+ CI CK + ++
Sbjct: 936 KPLERIFNPILGDGKTKELLAGAHTRTIKMSAPKTGGLMRFAKKSEVCINCKTPLKSENH 995
Query: 936 GTLCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G LC +C +G+ ELY +SQ+ LE F RLWT+CQ CQGSLHQ+VLC ++DCPIFY
Sbjct: 996 GALCPNCIREGKGPELYSNALSQMNYLENKFSRLWTECQRCQGSLHQEVLCGNKDCPIFY 1055
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
R KAQKD+ + ++L +W
Sbjct: 1056 MRTKAQKDVHQQAMELVKW 1074
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 137/351 (39%), Positives = 196/351 (55%), Gaps = 40/351 (11%)
Query: 59 LRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAA 118
+R +EQ +D W+RP LS+ + S+ + + FQQLD + +
Sbjct: 66 VRGMEQEED-----QNWSRPELSADFNSELEDVSFQQLDAE-----------EFNERDNT 109
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDD-----ISHFHQILEGRMREANRN 173
R FG+T GHSV C V GF YFY+ P+G D ++ H EG
Sbjct: 110 FARFFGITEAGHSVLCNVVGFIHYFYVPVPKGFVKDQHLQQFTNYLHANYEG-------- 161
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMK 232
+ +E+ K +I Y + PF K+ V + R +RG I+ + L +
Sbjct: 162 ------IDKVEITLKETIWGYNRNIKTPFFKVFVNNTRNITKLRTAFERGDIRFENLFSE 215
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL--SYCQLEFDCLYSDIISR 290
+ ++Y+ N+ + +R MIDC I G +WI +P KY+ L S CQ+E Y D+I+
Sbjct: 216 T-VSYD-NINYLMRLMIDCKITGMSWITLPKSKYKMVPDNLKISSCQIECSIDYRDLITH 273
Query: 291 HPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLK 350
EGE+ KMAP RILSFDIECAGRKG FPE HDPVIQ+AN+V+ GE +PF+RNV T+
Sbjct: 274 PSEGEWLKMAPLRILSFDIECAGRKGIFPEAQHDPVIQIANVVSKSGESKPFVRNVFTVN 333
Query: 351 SCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+C+PI+G + E ++L+ WR FI EVDPDV+IGYN FD+PYL+++
Sbjct: 334 TCSPIIGSQIFEHAKEEEMLMHWRQFITEVDPDVIIGYNTSNFDIPYLLDR 384
>gi|1027513|emb|CAA61369.1| DNA polymerase delta [Drosophila melanogaster]
Length = 1092
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/624 (62%), Positives = 477/624 (76%), Gaps = 12/624 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRR A+YCLKDAYLP RLL+KLM I NY+EMARVTGVP+
Sbjct: 469 QKEDVHHSIITDLQNGDEQTRRRSAMYCLKDAYLPLRLLEKLMAIVNYMEMARVTGVPLE 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKVLSQLLRKAK K ++P+ GS++ YEGATV+E + G+Y PI+TLD
Sbjct: 529 SLLTRGQQIKVLSQLLRKAKTKGFIMPSYTSQGSDE-QYEGATVIEPKRGYYADPISTLD 587
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKL----NLPPECVNKTPSGETFVKSNLQKGILPE 575
FASLYPSIMMA+NLCY+TLV KL NL + V +TP+ FVKS +++G+LPE
Sbjct: 588 FASLYPSIMMAHNLCYTTLVLGGTREKLRQQENLQDDQVERTPANNYFVKSEVRRGLLPE 647
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
ILE LLAARKRAK DLK DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS
Sbjct: 648 ILESLLAARKRAKNDLKVETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISG 707
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SVT+YGR MIE TK VE +T GYE+NA VIYGDTDSVMV FGV T+E +M+LGREA
Sbjct: 708 SVTAYGRTMIEMTKNEVESHYTQANGYENNAVVIYGDTDSVMVNFGVKTLERSMELGREA 767
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A+ +S F+ PIKLEFEKVYYPYLLI+KKRYAGLY+T P+ +DKMD KGIETVRRDN L
Sbjct: 768 AELVSSKFVHPIKLEFEKVYYPYLLINKKRYAGLYFTRPDTYDKMDCKGIETVRRDNSPL 827
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V NL+ CL K+L++RD GAV YVK I+DLL NR+D+S LVITK L KT DY K A
Sbjct: 828 VANLMNSCLQKLLIERDPDGAVAYVKQVIADLLCNRIDISHLVITKELAKT--DYAAKQA 885
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
HVELA +M+KRD TAP +GDRVPYVI AAK AY+++EDP+YVLEN++PID YYLE
Sbjct: 886 HVELAAKMKKRDPGTAPKLGDRVPYVICAAAKNTPAYQKAEDPLYVLENSVPIDATYYLE 945
Query: 876 NQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS 934
Q+SKPLLRIFEPIL NA LL G+HTR+ ++ T G+ F ++ SC+GCK+L+
Sbjct: 946 QQLSKPLLRIFEPILGDNAESILLKGEHTRTRTVVTSKVGGLAGFMTKKTSCLGCKSLMP 1005
Query: 935 NG----TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
G LC HC+ R +ELY K V +ELE F RLWT+CQ CQ SLH++V+C++RDCP
Sbjct: 1006 KGYEQACLCPHCEPRMSELYQKEVGAKRELEETFSRLWTECQRCQESLHEEVICSNRDCP 1065
Query: 991 IFYRRKKAQKDMAEAKLQLDRWNF 1014
IFY R+K + D+ + ++ R+
Sbjct: 1066 IFYMRQKVRMDLDNQEKRVLRFGL 1089
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 230/385 (59%), Gaps = 13/385 (3%)
Query: 25 QATTPTTPVIDDEFLDEDVFLDETLLPED-EESLILRDIEQRQDFASRLAKWARPPLSSG 83
A P P DDE + + L ED +++L++ D + Q + R W+RPP
Sbjct: 14 HAKKPRNP-DDDEEMGFEAELAAFENSEDMDQTLLMGDGPENQTTSER---WSRPPPPEL 69
Query: 84 YVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYF 143
S+ ++ FQQLD++ +G + G ++R+FGVT EG+SVCC VHGF PYF
Sbjct: 70 DPSK-HNLEFQQLDVENYLGQPLPGMPGAQIGPVPVVRMFGVTMEGNSVCCHVHGFCPYF 128
Query: 144 YISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQP 201
YI P + L+ ++ RN+K V + V +E+V+K +I Y K Q
Sbjct: 129 YIEAPSQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVELVEKLNIHGYNGDKKQR 188
Query: 202 FLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV 261
++KI V LP VA+ +L + + + + + +E+N+ F +RFM+D ++VG NWIE+
Sbjct: 189 YIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFDIRFMVDTDVVGCNWIEL 248
Query: 262 PVGKYR---KTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKG 316
P+G +R +K L S CQ+E D + IS PEGE+SK+APFRILSFDIECAGRKG
Sbjct: 249 PMGHWRIRNSHSKPLPESRCQIEVDVAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKG 308
Query: 317 HFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDF 376
FPE DPVIQ+AN+V QGE++PFIRNV TL CAPI+G V+ + E +L W F
Sbjct: 309 IFPEAKIDPVIQIANMVIRQGEREPFIRNVFTLNECAPIIGSQVLCHDKETQMLDKWSAF 368
Query: 377 IREVDPDVMIGYNICKFDLPYLIEK 401
+REVDPD++ GYNI FD PYL+ +
Sbjct: 369 VREVDPDILTGYNINNFDFPYLLNR 393
>gi|324120734|dbj|BAJ78758.1| DNA polymerase delta catalytic subunit [Gynaikothrips ficorum]
Length = 1091
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/618 (61%), Positives = 482/618 (77%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I+DLQNG +TRRRLAVYCLKDAYLP RLL+KLM I NY+EMARVTGV ++
Sbjct: 472 QKEDVHHSVITDLQNGTPQTRRRLAVYCLKDAYLPIRLLEKLMCIINYMEMARVTGVTLA 531
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKA++K+ ++P + G + YEGATV+E + G+Y PI+TLD
Sbjct: 532 SLLTRGQQIKVMSQLLRKAREKDFIMPTYQSTGGDD-QYEGATVIEPKRGYYADPISTLD 590
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ +L L + +KTP+ FVK +++KG+LPEIL++
Sbjct: 591 FSSLYPSIMMAHNLCYTTLLLGNAKERLGLSADQYSKTPANNFFVKPSVRKGLLPEILDD 650
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AK+DLK KDP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 651 LLSARKKAKSDLKNEKDPFKQRVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 710
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK VE+K+ GY+H+A VIYGDTDSVMV+FGV T+E AM+LGREAA+++
Sbjct: 711 YGRTMIEQTKTNVEEKYRIENGYKHDAVVIYGDTDSVMVKFGVKTLEEAMELGREAAEFV 770
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ FIKPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDN LV N+
Sbjct: 771 TSKFIKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNSPLVANM 830
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DR+ AV Y KS ISDLL NR+D+S LVITK LTK+ DY K AHVEL
Sbjct: 831 MNTCLQKLLIDRNPDDAVAYAKSVISDLLCNRIDISQLVITKELTKS--DYAAKQAHVEL 888
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD AP +GDRVP+V+I A+KG AY ++EDPIYVLEN+IPID YYLENQ+S
Sbjct: 889 AAKMKKRDPGNAPKLGDRVPFVLISASKGTPAYMKAEDPIYVLENSIPIDFSYYLENQLS 948
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT- 937
KPLLRIF PIL + ++ LL GDHTR+ ++ T + F K++ +C+GCKA++ NG
Sbjct: 949 KPLLRIFTPILGDKAESILLRGDHTRTRAVMTSRVGALSAFTKKKETCLGCKAVLPNGQE 1008
Query: 938 ---LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LC HC A+LY + + + +E F RLWT+CQ CQGSLH++VLCTSRDCPIFY
Sbjct: 1009 NNPLCQHCAKDGAKLYLTQLQRYRSMEERFSRLWTECQRCQGSLHEEVLCTSRDCPIFYM 1068
Query: 995 RKKAQKDMAEAKLQLDRW 1012
RKK Q ++ + R+
Sbjct: 1069 RKKVQMELISQDKNIQRF 1086
Score = 315 bits (807), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 166/408 (40%), Positives = 239/408 (58%), Gaps = 22/408 (5%)
Query: 7 SARKRPPPTPKESWPNKQQATTPTTPVIDDE----FLDEDVFLDETLLPEDEESLILRDI 62
S +++PPP+ K P DD+ F DE F+ + D ++ +L +
Sbjct: 2 SNKRKPPPSKTNGTSKK-----PRVENEDDDAPGTFEDELAFMVQN---GDFDTDVL--M 51
Query: 63 EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRI 122
+ D KW+RP L S S +++FQQ+D+D+ G + G ++R+
Sbjct: 52 GEGPDTHQTSNKWSRPALPSLRPSD-DNLVFQQIDVDHYTGQPLPGMPGAKVGPVPVMRL 110
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFV 180
FGVT G+SVCC VHGF PYF++S P + F + L + + +K V + V
Sbjct: 111 FGVTSSGNSVCCHVHGFTPYFFVSAPPNFTNPNCHDFQKALSKAIMADMKGNKDNVTEPV 170
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
+E+V+K+++ Y +LKI +ALP ++A + +L+RG G ++ +E N
Sbjct: 171 LAVEIVRKQNLYGYHGDDMHNYLKITLALPRLIAPAKRLLERGGVYPADGGHAYTAFECN 230
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKY-----RKTAKTLSYCQLEFDCLYSDIISRHPEGE 295
+ F +RFM+D ++VG +W+E+P G + + +S CQLE D Y +IS PEGE
Sbjct: 231 IDFDIRFMVDTHMVGCSWVELPAGSWTIRQPHGSLPIVSRCQLEVDVAYDKLISHQPEGE 290
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
+SK+APFRILSFDIECAGRKG FPEP HDPVIQ+AN+V QGE PFIRNV TL +CAPI
Sbjct: 291 WSKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGEADPFIRNVFTLDTCAPI 350
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
VG V+S +TE ++ W DF+REVDPD+ GYNI FD PYLI + +
Sbjct: 351 VGCQVISCKTEAEMFTKWSDFVREVDPDIFTGYNIGNFDFPYLINRAE 398
>gi|156552223|ref|XP_001606357.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Nasonia
vitripennis]
Length = 1086
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/618 (61%), Positives = 483/618 (78%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNGNA+TRRRLAVYCLKDAYLP RLLDKLM I Y+EMARVTGV +S
Sbjct: 467 QKEDVHHSIISDLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSLS 526
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK ++ +IP GS++ YEGATV+E G+Y PIATLD
Sbjct: 527 SLLTRGQQIKVVSQLLRKTIERGYLIPVHHGQGSDE-QYEGATVIEPLRGYYNDPIATLD 585
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSI+MA+N+CY+TL++P NL + + +TP+ FVK +++KGILPEILE+
Sbjct: 586 FSSLYPSIIMAHNICYTTLLSPSAQNHYNLSNDDITRTPANSNFVKGSVRKGILPEILEQ 645
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK AKADLK+ DPL++ VLDGRQ ALK+SANSVYGFTGA G+LPC+EIS SVT+
Sbjct: 646 LLSARKAAKADLKKETDPLKQKVLDGRQYALKVSANSVYGFTGAQQGKLPCLEISGSVTA 705
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE + GY+H+A VIYGDTDSVMV+FGV +E AMKLG+EAA+Y+
Sbjct: 706 YGRTMIEKTKQEVETHYRKENGYDHDAVVIYGDTDSVMVKFGVKKIEDAMKLGKEAAEYV 765
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ FIKPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV N+
Sbjct: 766 TSKFIKPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDKMDCKGLETVRRDNCPLVANM 825
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DR+ A+ Y K ISDLL NR+D+S LV+TK LTKT DY K AHVEL
Sbjct: 826 MNTCLQKLLIDRNPDDAMDYAKQIISDLLCNRIDISQLVVTKELTKT--DYTAKQAHVEL 883
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRDA TAP +GDR+PYV I KG AY+++EDPIYVLENNIPIDT+YYLENQ+S
Sbjct: 884 AAKMKKRDAGTAPKLGDRIPYVFISGPKGVPAYQKAEDPIYVLENNIPIDTNYYLENQLS 943
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS---- 934
KPL+RIFEPIL + ++ LL G+HTR+ S++T ++ F +++ +C+GCKA+++
Sbjct: 944 KPLVRIFEPILGDKAESLLLKGEHTRTKSVATSKVGALVAFTRKKEACLGCKAVLAADRE 1003
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LC +C+ +E ++ + ++LE F RLW +CQ CQGSLHQ+V+CTSRDCPIFY
Sbjct: 1004 GKALCQYCEEKEGQILQNEIYNGRKLEEKFCRLWAECQRCQGSLHQEVICTSRDCPIFYM 1063
Query: 995 RKKAQKDMAEAKLQLDRW 1012
RKK Q D+ +++++
Sbjct: 1064 RKKVQMDLDTQAKRIEKF 1081
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 218/343 (63%), Gaps = 12/343 (3%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSS-GSAAIIRIFGVTREGHS 131
+KW+RP + S+ ++ FQQ+D+D+ D +P S G ++R++GVT +G+S
Sbjct: 57 SKWSRPDPPALDPSK-DTLCFQQIDVDHYT-DKPMPGMPGSRIGPVPVMRMYGVTEQGNS 114
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC VHGF PYF++S F + L ++ +N+ + F+ +E+V+++
Sbjct: 115 VCCHVHGFSPYFFVSAHPSFNNSHCKSFKEALNAAVKNDMKNNNDNIQDFILAVEIVERQ 174
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
++ Y +K FLKI VALP ++A C+ +L+ + L K + YESN+ F +RFM
Sbjct: 175 TVYGYTGEKKSQFLKITVALPRLIAPCKRLLETQVVFPTLDHK-YTAYESNIDFDIRFMA 233
Query: 250 DCNIVGGNWIEVPVGKYRKTAK------TLSYCQLEFDCLYSDIISRHPEGEFSKMAPFR 303
D ++VG +WIE+ GK++ K ++ CQLE D + ++ PEGE+SK+APFR
Sbjct: 234 DTHMVGCSWIELKPGKWKLRGKHNHNMAQITRCQLECDVAWDQFVAHAPEGEWSKVAPFR 293
Query: 304 ILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSF 363
ILSFDIECAGRKG FPEP HDPVIQ+AN+V LQGE +PF+RN+ TL +CAPIVG V+SF
Sbjct: 294 ILSFDIECAGRKGIFPEPEHDPVIQIANMVILQGESEPFLRNIFTLDTCAPIVGCQVLSF 353
Query: 364 ETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHH 406
E E +L W DFIR++DPD+ GYNI FD PYLI + H
Sbjct: 354 EKESSMLEKWADFIRQLDPDIFTGYNINNFDFPYLINRAQHLH 396
>gi|195019160|ref|XP_001984922.1| GH16758 [Drosophila grimshawi]
gi|193898404|gb|EDV97270.1| GH16758 [Drosophila grimshawi]
Length = 1095
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/620 (61%), Positives = 479/620 (77%), Gaps = 8/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLA+YCLKDAYLP RLL KLM I NY+EMARVTGVP+
Sbjct: 476 QKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLGKLMAIVNYMEMARVTGVPLE 535
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKVLSQLLRKAK K ++P+ +GS++ YEGATV+E + G+Y PI+TLD
Sbjct: 536 SLLTRGQQIKVLSQLLRKAKTKGFIMPSYTSSGSDE-QYEGATVIEPKRGYYADPISTLD 594
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMA+NLCY+TL+ P K+ L + V +TP+ FVK+ L++G+LPEILE
Sbjct: 595 FASLYPSIMMAHNLCYTTLLLPGAKDKMGLRDDQVEQTPANNRFVKAELRRGLLPEILES 654
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRAK DLK D ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 655 LLAARKRAKNDLKVETDSFKRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 714
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK VE +T GYE++A VIYGDTDSVMV FGV T+E +M+LGREAAD +
Sbjct: 715 YGRVMIELTKNEVESHYTRANGYENDAVVIYGDTDSVMVNFGVKTLERSMELGREAADLV 774
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F++PIKLEFEKVYYPYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDN LV NL
Sbjct: 775 SSKFVRPIKLEFEKVYYPYLLINKKRYAGLYFTKPDKYDKMDCKGIETVRRDNSPLVANL 834
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L++R+ GAV Y K I+DLL NR+D+S LVITK L KT DY K AHVEL
Sbjct: 835 MNACLQKLLIERNPDGAVDYAKQIIADLLCNRIDISQLVITKELAKT--DYAAKQAHVEL 892
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRDA TAP +GDRVPYVI A K AY+++EDP+YVLEN++PID +YYLE Q+S
Sbjct: 893 AAKMKKRDAGTAPKLGDRVPYVICAATKNTPAYQKAEDPLYVLENSVPIDANYYLEQQLS 952
Query: 880 KPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
KPLLRIFEPIL + A LL G+HTR+ ++ T G+ F ++ +C+GCK+L+ G
Sbjct: 953 KPLLRIFEPILGDKAESVLLKGEHTRTRTVVTSKVGGLAGFMTKKAACLGCKSLLPKGYE 1012
Query: 937 --TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LC HC+ + +ELY K V+ + LE F RLWT+CQ CQGSLH++V+C +RDCPIFY
Sbjct: 1013 QAALCPHCEPKMSELYQKEVASKRGLEQTFARLWTECQRCQGSLHEEVICCNRDCPIFYM 1072
Query: 995 RKKAQKDMAEAKLQLDRWNF 1014
R+K + ++ + ++ R+
Sbjct: 1073 RQKVRIELDAQEQRVRRFGL 1092
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/366 (42%), Positives = 222/366 (60%), Gaps = 19/366 (5%)
Query: 46 DETLLPEDEESLILRDIEQRQDFASRLAKWAR-PPLSSGYVSQCQSIMFQQLDIDYVIGD 104
DE +L ++S +L + + Q + R W+R PP +S +++FQQLD++ G
Sbjct: 44 DEVML---DQSQLLGEGPENQQTSER---WSRAPPPQLNPLSD--NLIFQQLDVENYTGQ 95
Query: 105 SNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILE 164
+ G ++R+FGVT EG+SVCC VHG+ YFYIS P+ + H+ L+
Sbjct: 96 PLPGMPGAQLGPVPVVRMFGVTMEGNSVCCHVHGYCSYFYISAPKNFEQRHCAALHEALD 155
Query: 165 GR----MREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL 220
+ +R N++ KV + V +E+VQ+ +I YQ Q ++KI V LP VA+ +L
Sbjct: 156 RKVIADIRGGNKD-KVQEAVLAVELVQRLNIHGYQGDAKQSYIKITVTLPRFVAAASRLL 214
Query: 221 DRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL-----SY 275
+ + + +E+N+ F +RFM++ ++VG NWIE+P G +R + S
Sbjct: 215 KNEVIMGAFDFQDCRAFENNIDFDIRFMVETSVVGCNWIELPAGAWRLRGRNSKPAPESR 274
Query: 276 CQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTL 335
CQLE D Y IS PEGE+SK+AP RILSFDIECAGR+G FPE DPVIQ+AN+V
Sbjct: 275 CQLEVDVAYDQFISHEPEGEWSKVAPLRILSFDIECAGRRGIFPEAKMDPVIQIANMVIR 334
Query: 336 QGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDL 395
QGE +PFIRNV TLK CAPI+G V+ ++ E +L W F+REVDPD++ GYNI FD+
Sbjct: 335 QGESEPFIRNVFTLKQCAPIIGSQVLCYDQETQLLDKWAAFVREVDPDILTGYNINNFDI 394
Query: 396 PYLIEK 401
PYL+ +
Sbjct: 395 PYLLNR 400
>gi|410982338|ref|XP_003997514.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 3 [Felis
catus]
Length = 1124
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/635 (60%), Positives = 483/635 (76%), Gaps = 23/635 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N +EMARVTGVP+
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTGVPLG 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGF--------- 510
+LL+RGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+
Sbjct: 545 YLLTRGQQVKVVSQLLRQAMREGLLMPVVKTEGVED--YTGATVIEPLKGYDPVSGWGCL 602
Query: 511 ----YEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKS 566
Y+ PIATLDF+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK+
Sbjct: 603 PPRYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKT 662
Query: 567 NLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG 626
+++KG+LP+ILE LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG
Sbjct: 663 SVRKGLLPQILENLLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVG 722
Query: 627 QLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVE 686
+LPC+EIS SVT +GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V
Sbjct: 723 KLPCLEISQSVTGFGRQMIEKTKQLVESKYTVENGYGTSAKVVYGDTDSVMCRFGVSSVA 782
Query: 687 AAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGI 745
AM LGREAAD++SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+
Sbjct: 783 EAMALGREAADWVSGHFPPPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGL 842
Query: 746 ETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTK 805
E VRRDNC LV NLVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+
Sbjct: 843 EAVRRDNCPLVANLVTASLRRLLIDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTR 902
Query: 806 TGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 865
DY K AHVELAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE++
Sbjct: 903 AASDYAGKQAHVELAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS 962
Query: 866 IPIDTHYYLENQISKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQ 923
+PIDT YYLE Q++KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR
Sbjct: 963 LPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRH 1022
Query: 924 LSCIGCKAL-----ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSL 978
CIGC+ + G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSL
Sbjct: 1023 SCCIGCRTVXXXXXXXTGAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSL 1082
Query: 979 HQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWN 1013
H+DV+CTSRDCPIFY RKK +KD+ + + L R+
Sbjct: 1083 HEDVICTSRDCPIFYMRKKVRKDLEDQEQLLRRFG 1117
Score = 312 bits (799), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 211/335 (62%), Gaps = 8/335 (2%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIG--DSNRELLPLSSGSAAIIRIFGVTREGH 130
A+W RP S Q + ++FQQL+ID+ +G P GS ++R FGVT EG
Sbjct: 77 ARWLRPSPPS-LDPQTEPLIFQQLEIDHYVGLAQPLPGAAPPPPGSVPVLRAFGVTDEGV 135
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC +HGF PYFY P G G + + + L + R K V +E+ +
Sbjct: 136 SVCCHIHGFAPYFYTPAPPGFGREHLGDLQRELNAAISRDQRGGKELAGPAVLSVELCSR 195
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
S+ Y PFL+I +ALP ++A R +L++GI++ GLG SF YE+NV F +RFM
Sbjct: 196 ESMFGYHGHGPSPFLRITLALPRLLAPARRLLEQGIRVPGLGTPSFAPYETNVDFEIRFM 255
Query: 249 IDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILS 306
+D +IVG NW+E+P GKY R K ++CQLE D +SD++S PEGE+ ++AP R+LS
Sbjct: 256 VDTDIVGCNWLELPAGKYLLRLEGKA-THCQLEADVQWSDVVSHPPEGEWQRIAPLRVLS 314
Query: 307 FDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETE 366
FDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E
Sbjct: 315 FDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYERE 374
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 375 EELLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 409
>gi|307167251|gb|EFN60939.1| DNA polymerase delta catalytic subunit [Camponotus floridanus]
Length = 1092
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/618 (61%), Positives = 483/618 (78%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+ I+ LQNGN++TRRRLAVYCLKDAYLP RLLDKLM I Y+EMARVTGV IS
Sbjct: 473 QKEDVHYKDITSLQNGNSQTRRRLAVYCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSIS 532
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK ++K+ +IP V Q +EGATV+E + G+Y PIATLD
Sbjct: 533 SLLTRGQQIKVVSQLLRKTREKDYLIP-VHQGQVVDEQFEGATVIEPKRGYYNSPIATLD 591
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSI+MA+NLCY+TL+T R+LN+ + V TPS F+KS ++KGILPEILE
Sbjct: 592 FSSLYPSIIMAHNLCYTTLLTLAKKRELNIQEDQVTVTPSNSLFIKSTVRKGILPEILEN 651
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AKA+LK+ DPL++ VLDGRQ ALK+SANSVYGFTGA +G+LPC+EIS+SVT+
Sbjct: 652 LLAARKKAKAELKQETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLEISASVTA 711
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE+ F GY+++A VIYGDTDSVMV+FGV ++E AM+LGR+AADY+
Sbjct: 712 YGRTMIEQTKQEVENHFRIENGYKNDAVVIYGDTDSVMVKFGVESIEDAMELGRKAADYV 771
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ FIKPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV N+
Sbjct: 772 TSKFIKPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDKMDCKGLETVRRDNCPLVANM 831
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL +L++R+ AV Y K ISDLL NR+DLS LVITK LTKT DY K AHVEL
Sbjct: 832 MNTCLQILLIERNPHAAVDYAKQIISDLLCNRIDLSQLVITKELTKT--DYAAKQAHVEL 889
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRDA AP +GDRV YV AAKG AY+++EDP+Y LEN+IPIDT+YYLENQ++
Sbjct: 890 AAKMKKRDAGNAPKLGDRVAYVFTSAAKGTPAYQKAEDPVYALENSIPIDTNYYLENQLA 949
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----S 934
KPL+RIFEPIL + A LL GDHTR+ I+T + F +++ +C+GCKA++
Sbjct: 950 KPLVRIFEPILGEKAESLLLKGDHTRTRCIATSQVGALAAFTRKKETCLGCKAVLPPDRE 1009
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+ +C HC+ +EAEL+ + Q+LE F RLWT+CQ CQGSLHQ+V+C++RDCPIFY
Sbjct: 1010 DKAVCKHCESQEAELFHNELQAQQKLEEKFSRLWTECQRCQGSLHQEVICSNRDCPIFYM 1069
Query: 995 RKKAQKDMAEAKLQLDRW 1012
R K++ DMA ++ R+
Sbjct: 1070 RVKSRMDMAAKAKRIQRF 1087
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/355 (40%), Positives = 223/355 (62%), Gaps = 13/355 (3%)
Query: 55 ESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSS 114
E+LI+ + ++++ +++ ++ + PPL+ Q ++ FQQ++ID+ IG +
Sbjct: 48 ETLIIGEGPEQENTSAKWSRPSPPPLNP----QIDTLAFQQIEIDHYIGKPLPGMPGSKV 103
Query: 115 GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS 174
G I+R+FGVT G+S+CC VHGF PY ++S P + F + L +++ +++
Sbjct: 104 GPVPIMRMFGVTERGNSICCHVHGFCPYLFVSAPPNFTNNHCKPFKEALNQAVKKDMKSN 163
Query: 175 --KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK 232
+ + + +E+V K+SI Y PFLKI VA+P ++A C+ +L++
Sbjct: 164 PDNIQEAILAVELVYKQSIYGYGGNDKLPFLKITVAVPKLIAPCKRLLEQDTVYTIFNY- 222
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPV------GKYRKTAKTLSYCQLEFDCLYSD 286
+ +ESN+ F +RFM+D ++VG +WIE+ G+Y + + CQLE D + +
Sbjct: 223 HYRAFESNIDFDIRFMVDTSVVGCSWIELSPKSWKLRGQYGHMLELTTRCQLEVDVAWDN 282
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
I+ PEGE+SK+APFRILSFDIECAGR+G FPE HDPVIQ+AN+V QGE +PF++N+
Sbjct: 283 FIAHAPEGEWSKLAPFRILSFDIECAGREGIFPEAKHDPVIQIANMVIKQGESEPFLKNI 342
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
TL +CAPIVG V+SF+ E +L W DF+R++DPD+ GYNI FD PYLI +
Sbjct: 343 FTLNTCAPIVGCQVLSFDKENLMLEKWADFVRQLDPDIFTGYNINNFDFPYLINR 397
>gi|301764899|ref|XP_002917866.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit-like [Ailuropoda melanoleuca]
Length = 1106
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/618 (62%), Positives = 482/618 (77%), Gaps = 7/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N +EMARVTGVP+
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTGVPLG 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMREGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY NA+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYGANAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPPPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT Y + +
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYX-KKKK 961
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR CIGC+ ++S+
Sbjct: 962 KKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRHSCCIGCRTVLSHQ 1021
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 1022 GAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1081
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1082 KKVRKDLEDQEQLLRRFG 1099
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 154/334 (46%), Positives = 212/334 (63%), Gaps = 6/334 (1%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGH 130
A+W RP S Q + ++FQQL+ID+ +G + P S S ++R FGVT EG
Sbjct: 77 ARWLRPTPPS-LNPQTEPLIFQQLEIDHYVGPAQPLPGAPPPSCSSVPVLRAFGVTDEGV 135
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC +HGF PYFY P G G + + + L + R K V +E+ +
Sbjct: 136 SVCCHIHGFAPYFYTPAPPGFGSEHLGDLQRELNAAISRDQRGGKELTGPAVLSVELCSR 195
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
S+ Y PFL+I +ALP ++A R +L++GI++ GLG SF YE+NV F +RFM
Sbjct: 196 ESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFM 255
Query: 249 IDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
+D +IVG NW+E+P GKY + + + CQLE D L+SD++S PEG++ ++AP R+LSF
Sbjct: 256 VDTDIVGCNWLELPAGKYVLRQERKATLCQLEADVLWSDVVSHPPEGQWQRIAPLRVLSF 315
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E
Sbjct: 316 DIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEREE 375
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 376 ELLQAWSTFIRTMDPDVITGYNIQNFDLPYLISR 409
>gi|198429892|ref|XP_002125320.1| PREDICTED: similar to Polymerase (DNA directed), delta 1, catalytic
subunit [Ciona intestinalis]
Length = 1064
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/618 (60%), Positives = 485/618 (78%), Gaps = 6/618 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++LQ+GNA++RRRLAVYCLKDA LP RLLDKLMFI NY+EMARVTGVP+S
Sbjct: 445 QKEDVHHSIITELQHGNAQSRRRLAVYCLKDALLPIRLLDKLMFIINYMEMARVTGVPLS 504
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQSIKV+SQLLRK K+ +L++P + + ++ + GATV++ G+Y +PI TLD
Sbjct: 505 YLLTRGQSIKVISQLLRKTKEADLLMPVIPTSNDDE--FTGATVIDPIKGYYNQPITTLD 562
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIM A+NLCY+TL+ K L PE KTPSG+ FVK++++KG+LP ILE
Sbjct: 563 FSSLYPSIMQAHNLCYTTLLRKNSKEKDLLGPEDFIKTPSGDYFVKASVRKGLLPGILES 622
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL AR AKA +K KDP +++VLDGRQLALKIS NSVYGFTGA +G+LPC+EIS SVT+
Sbjct: 623 LLTARTNAKALMKVEKDPFKRSVLDGRQLALKISCNSVYGFTGAQIGKLPCLEISGSVTA 682
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MIE TK+ VE ++T GY H+A+VIYGDTDSVMV+FGV TV +M LG+EAA ++
Sbjct: 683 FGRMMIEQTKQHVETQYTVENGYSHDAKVIYGDTDSVMVKFGVSTVAESMVLGKEAASFV 742
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKN 758
S F+KPIKLEFEKVYYPYLLI+KKRYAGLY+ ++ E DK+D KGIETVRRDN L N
Sbjct: 743 SDKFVKPIKLEFEKVYYPYLLINKKRYAGLYFSSSSEVHDKIDCKGIETVRRDNAPLTAN 802
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L++ CL K+LV RD GAV + K ISDLL NR+D+S L+ITK LTKT ++Y K AHVE
Sbjct: 803 LISTCLEKLLVGRDPDGAVAHAKEVISDLLCNRIDISQLIITKELTKTKEEYAAKQAHVE 862
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRDA +AP +GDRVP+VI+ AKG AY +SEDPIYVLENN+ IDT +YL++Q+
Sbjct: 863 LAERMKKRDAGSAPQLGDRVPFVIVCGAKGQAAYLKSEDPIYVLENNLQIDTEHYLKHQL 922
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-SN 935
++PLLR+FEP+L A + LL GDHTR + + G+M FAK++++CIGCKA++ +
Sbjct: 923 TQPLLRVFEPVLGEAKAQSVLLKGDHTRVKKVVSSKVGGLMAFAKKRVTCIGCKAVLPKD 982
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C HC+ RE+++Y K ++++ LE F RLWTQCQ CQGSLH++V+CTSRDCPIFY R
Sbjct: 983 GAVCVHCESRESQIYQKEIAKLSSLEEKFSRLWTQCQRCQGSLHEEVICTSRDCPIFYMR 1042
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK + D+ L R+
Sbjct: 1043 KKVRIDLESQSSVLRRFG 1060
Score = 275 bits (704), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 200/336 (59%), Gaps = 4/336 (1%)
Query: 69 ASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRE-LLPLSSGSAAIIRIFGVTR 127
AS L++W RPPL I+FQQLD+++ D + P G+A IIR++GVT
Sbjct: 35 ASVLSEWQRPPLPK-IDPNNDPIIFQQLDLEHYTDDKEYPGMPPPQGGTAPIIRMYGVTT 93
Query: 128 EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQIL-EGRMREANRNSKVPQFVRHIEMV 186
EGHS+ C HGF PYFY+ G + F L E ++E N V + V +E
Sbjct: 94 EGHSILCHFHGFLPYFYVKAMPGFKDEHCEEFQNCLNEIVLKEMRGNKDVTKAVYKVECC 153
Query: 187 QKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALR 246
++++ Y FLKI VA+ +VA+ + +L+ G ++ +ES + F +R
Sbjct: 154 MRQNMYGYHSGGKSKFLKITVAVQRLVATTKRMLEGGFHTPTYPDHAYSVFESFIDFEIR 213
Query: 247 FMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILS 306
FM D N+ G NW+E+ GKY+ + + QLE D ++ S P+GE+ K+AP RILS
Sbjct: 214 FMTDTNLTGCNWVELNPGKYKIRKEMTTSAQLEVDVVWDQFTSHPPDGEWQKIAPIRILS 273
Query: 307 FDIECAGRKGHFPEPTHDPVIQVANLVTLQG-EKQPFIRNVMTLKSCAPIVGVDVMSFET 365
FDIECAGRKG FP P D VIQ+A++V QG ++PFI+ + TL SC+ IVG V SF+T
Sbjct: 274 FDIECAGRKGIFPVPNIDSVIQIASMVKCQGSHEEPFIKTIFTLNSCSTIVGARVFSFKT 333
Query: 366 ERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E +L A+ DF+R VDPDV+ GYNI FDLPYLI +
Sbjct: 334 EEGLLQAFSDFVRAVDPDVISGYNIQNFDLPYLINR 369
>gi|298714506|emb|CBJ27528.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1097
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/617 (63%), Positives = 476/617 (77%), Gaps = 20/617 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIISDLQNG+ E RRRLAVYC+KDA LP +L++KL + NY+EMARVTGVP++
Sbjct: 491 QKEDVHYSIISDLQNGSDEDRRRLAVYCIKDALLPMKLMEKLSVMVNYIEMARVTGVPLN 550
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ IKV S LLRK + NL+IPN+ + +Q TYEGATV+E + FYE+PIATLD
Sbjct: 551 FLLSRGQQIKVFSMLLRKTRSVNLLIPNLPKHAVDQETYEGATVIEPKKAFYEEPIATLD 610
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIM AYNLCYSTLV ED KL P+ +PSG+ FVKS + KG+LP IL+E
Sbjct: 611 FASLYPSIMQAYNLCYSTLVAGEDKNKLK--PDQYLTSPSGDVFVKSEVTKGLLPAILDE 668
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AK D+ A DP+EKAV +GRQLALK+SANSVYGFTGATVGQLPC+ I+SS TS
Sbjct: 669 LLTARKQAKRDMAAATDPMEKAVQNGRQLALKVSANSVYGFTGATVGQLPCLPIASSTTS 728
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR ++ T+ VE+ +T GY+H+A+V+YGDTDSVMV+FG TV AM L +AA+ +
Sbjct: 729 YGRDLLFRTRSYVEETYTVANGYDHDADVVYGDTDSVMVKFGSKTVAEAMPLAEKAAEEV 788
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F +PIKLEFEKVY+PYLL++KKRYAGL WT +K+DKMDTKG+ETVRRDNCLLV+ +
Sbjct: 789 SKIFPRPIKLEFEKVYWPYLLMNKKRYAGLLWTKVDKYDKMDTKGLETVRRDNCLLVRKV 848
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD--YEVKAAHV 817
V CL K+L+DRD+ GA+ Y K IS+LL NRMD+SLLVITK L K+ D Y K AHV
Sbjct: 849 VDTCLRKVLIDRDVQGAITYSKQVISELLQNRMDISLLVITKSLGKSADSEGYTAKQAHV 908
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA RM+KRD TA AAKGA AYERSEDP+YVLENN+PIDT YYL NQ
Sbjct: 909 ELAMRMKKRDPGTA-----------PNAAKGAAAYERSEDPVYVLENNLPIDTEYYLTNQ 957
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPS--NSGIMKFAKRQLSCIGCKALIS- 934
+SKPL R+FEPI+ N S LL G+HTRSI TP+ GIM FA ++L C+GCKA IS
Sbjct: 958 LSKPLSRLFEPIIDNPSA-LLHGEHTRSIVKKTPTARAGGIMMFAVKKLKCMGCKAPISE 1016
Query: 935 -NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
TLC+HC+ +E ++Y + +V E ++LF RLWTQCQ+CQGS HQDVLC++RDCPIFY
Sbjct: 1017 KEKTLCAHCRPKEGDIYSAKLREVNEQQLLFSRLWTQCQDCQGSFHQDVLCSNRDCPIFY 1076
Query: 994 RRKKAQKDMAEAKLQLD 1010
+RKK Q D+ EA+ QLD
Sbjct: 1077 KRKKVQIDLKEAQDQLD 1093
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 239/449 (53%), Gaps = 37/449 (8%)
Query: 2 NRSNGSARKRPPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDE----ESL 57
N SN KRP N Q + + P +DD+ + +L EDE E +
Sbjct: 8 NGSNNGEGKRPKG-------NGDQKDSQSPPHMDDDLM-------RSLQEEDEMRTDEDM 53
Query: 58 ILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSA 117
+ + + AKWARP L + + ++ ++I FQ +DID GD + + ++G A
Sbjct: 54 MDEPPPEAGGGETHAAKWARPQLRA-FEAKEKAITFQWVDIDMTSGDPVK--IDPATGKA 110
Query: 118 A----------IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQ--ILEG 165
+IR++GVT EG+SV VHGF PYFYI CP Q I
Sbjct: 111 PKQSSPEEVVPVIRLYGVTEEGNSVFTHVHGFVPYFYIPCPPNFEDRHRGALQQAIITAL 170
Query: 166 RMREANRNSKVPQFVRHIEMVQ-KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGI 224
R R +++ + + K+S++ Y ++ FL+I +A+P+++ + +L GI
Sbjct: 171 RARIRGDENRIRSLCLGVGFAKDKQSLLGYSFGNTRDFLQIYLAMPSLLPKVKTLLADGI 230
Query: 225 QLDGLG-MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFD 281
+DG G + + +YESNV F LRFM+D I G +WIE+P G Y R K S CQLE D
Sbjct: 231 HVDGYGQLCASTSYESNVPFVLRFMVDKEIPGASWIELPKGTYSIRSDYKKRSRCQLEVD 290
Query: 282 CLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQP 341
++ + S +GE++K+AP RILSFDIECAGRKGHFPE DPVIQ+AN+V +QG
Sbjct: 291 VFFNHMKSHPCKGEWNKVAPLRILSFDIECAGRKGHFPEADKDPVIQIANVVKVQGSDDV 350
Query: 342 FIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+NV TL C PIVG V+S TE ++L W F++ DPD++ GYNI FD+PYL+ +
Sbjct: 351 VAKNVFTLGGCTPIVGAHVISNATEDELLWEWSQFVKVADPDILTGYNIQNFDVPYLLNR 410
Query: 402 EDVHHSIISDLQNGNAETRRRLAVYCLKD 430
L+ R R + +KD
Sbjct: 411 AKALSRKSKKLEKFGEWGRLRGKMATMKD 439
>gi|390339587|ref|XP_003725042.1| PREDICTED: DNA polymerase delta catalytic subunit-like
[Strongylocentrotus purpuratus]
Length = 1696
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/610 (64%), Positives = 483/610 (79%), Gaps = 10/610 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA LP RLLDKLM + NY+EMARVTGVP++
Sbjct: 1079 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAMLPLRLLDKLMSVINYMEMARVTGVPLT 1138
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
+LLSRGQ IKV+SQLLRKAK+++LV+P K + G + + G VL+ G+Y+ PIATL
Sbjct: 1139 YLLSRGQQIKVVSQLLRKAKEQDLVMPAHKVETGDD---FVGGYVLDPIRGYYDCPIATL 1195
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DF+SLYPSIM A+NLCY+TL++P + K NL P+ KTP+G FVK ++++GILPEILE
Sbjct: 1196 DFSSLYPSIMQAHNLCYTTLLSP--SMKENLAPDQYIKTPTGNYFVKKSIRRGILPEILE 1253
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+LL ARKRAKADLK+ DPL K VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS S T
Sbjct: 1254 DLLTARKRAKADLKKETDPLRKRVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSTT 1313
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GR MI+ T++LVE ++T GY+ ++VIYGDTDSVMV+FGV TV +M+LG+EAA +
Sbjct: 1314 AFGRMMIDKTRQLVETRYTVENGYKTTSKVIYGDTDSVMVKFGVKTVAESMELGKEAAAW 1373
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
IS F PIKLEFEKVY+PYLLI+KKRYAGLY+T P+ +DKMD KGIETVRRD+C LV N
Sbjct: 1374 ISDEFPPPIKLEFEKVYFPYLLINKKRYAGLYFTKPDTYDKMDCKGIETVRRDSCPLVSN 1433
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L KIL++RD GA+ + K TISDLL NR+D+S LVITK LTKTG++Y + AHVE
Sbjct: 1434 VLNNVLQKILIERDPTGALDHTKQTISDLLCNRIDISQLVITKELTKTGEEYAGRQAHVE 1493
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA RM+KRD +AP +GDRVPYVII AKGA AYE+SEDPIYVLENNIPIDT YYLENQ+
Sbjct: 1494 LAARMKKRDPGSAPTLGDRVPYVIIAKAKGAAAYEKSEDPIYVLENNIPIDTTYYLENQL 1553
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK-ALISN 935
PLLRIFEP++ E LL GDHTR+ + T G+M FAK + C+GCK + +
Sbjct: 1554 KGPLLRIFEPVVGENKVEQVLLKGDHTRAKTQVTSKIGGLMAFAKVRSKCLGCKMGMDKD 1613
Query: 936 G-TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
G LC CK E+ +Y K +SQ+ LE FGRLWTQCQ CQGSLH+D+LCTSRDCPIFY
Sbjct: 1614 GVALCKFCKPNESSIYQKEISQLAALEEKFGRLWTQCQRCQGSLHEDILCTSRDCPIFYM 1673
Query: 995 RKKAQKDMAE 1004
RKK QKD+A+
Sbjct: 1674 RKKVQKDLAD 1683
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/295 (49%), Positives = 197/295 (66%), Gaps = 6/295 (2%)
Query: 113 SSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANR 172
+SG IIR+FGVT G+SV C +HGF PYFYI PQ P+ S F + + R
Sbjct: 709 TSGPTPIIRMFGVTEAGNSVLCHIHGFTPYFYIPAPQNFVPEHCSKFRMCVNDAVLADMR 768
Query: 173 NSK--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
++K + Q V ++++QK +I + K PFLKI +A P ++A R +L+ G+ +
Sbjct: 769 SNKDNLTQAVLAVDVMQKENIYGFHGNKMMPFLKITMAYPKLIAPARRLLEAGLSVPPYP 828
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT----LSYCQLEFDCLYSD 286
+ + TYESN+ F +RFM+D ++VG NWIEVP G YR + + S Q+E D +
Sbjct: 829 HRGYQTYESNIDFEIRFMVDADVVGCNWIEVPAGTYRVRSSSGHAPTSVSQIEIDVAWDR 888
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
IS P+G++ K+APFRILSFDIECAGRKG FPE DPVIQ+AN+V QGE+ PFIRN+
Sbjct: 889 FISHPPDGQWEKVAPFRILSFDIECAGRKGIFPEAEKDPVIQIANMVIRQGERDPFIRNI 948
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
TL +CAPIVG VMSF+TE ++L AW DF+RE+DPD++ GYNI FD+PYLI +
Sbjct: 949 FTLNTCAPIVGSQVMSFKTEHEMLQAWADFVREIDPDILTGYNIQNFDIPYLINR 1003
>gi|326428620|gb|EGD74190.1| polymerase [Salpingoeca sp. ATCC 50818]
Length = 1139
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/613 (62%), Positives = 487/613 (79%), Gaps = 13/613 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN ETRRRLAVYC+KDAYLP RLL KLM + NY+EMARVTGVP+S
Sbjct: 516 QKEDVHHSIITDLQNGNDETRRRLAVYCMKDAYLPLRLLSKLMCVVNYMEMARVTGVPLS 575
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL+R A Q +LVIP ++ GS++ YEGATV++ + G+Y+ PIATLD
Sbjct: 576 YLLSRGQQIKVISQLMRHAGQHDLVIPVHERQGSDE-QYEGATVIQPKRGYYDTPIATLD 634
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL++P++ + +L P+ KTP+G+ FVK+ ++KG+LP ILE
Sbjct: 635 FSSLYPSIMMAHNLCYTTLLSPQE--RSHLHPDDYIKTPNGDYFVKNKVRKGLLPLILES 692
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKADLK+ DP K+VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT+
Sbjct: 693 LLSARKRAKADLKKETDPFRKSVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVTA 752
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK+ VE ++ GY+H+A VIYGDTDSVMV+FG+ ++E MK+ +EAA+Y+
Sbjct: 753 FGREMIEATKQHVESRYNVKNGYKHDAVVIYGDTDSVMVKFGLDSLEETMKVAQEAAEYV 812
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ FI+PI LEFEKVY+PYLLI+KKRYAGL+WT EK+DKMD KG+ TVRRDNC LV L
Sbjct: 813 TSKFIRPINLEFEKVYFPYLLINKKRYAGLFWTRTEKWDKMDCKGLVTVRRDNCPLVVTL 872
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CLHK+L++R++ GA+ + K TISDLL N +D+S LVITK LTKT D+Y+ K AHVEL
Sbjct: 873 INTCLHKLLIERNVEGAIDFAKKTISDLLCNEIDISQLVITKALTKTADEYDGKQAHVEL 932
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRDA +AP +GDRV YVII+ KGA A+E+SEDPIYVLENNI +DT YYL NQ+
Sbjct: 933 AERMRKRDAGSAPTLGDRVAYVIIRGPKGAPAFEKSEDPIYVLENNIQLDTQYYLHNQLE 992
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSG--------IMKFAKRQLSCIGCKA 931
KPL+ IFEPIL + +KELLSG+HTR + S G IM F + + +C C+A
Sbjct: 993 KPLMSIFEPILGSRAKELLSGEHTRVVVKRASSAGGNDKKSRGSIMSFTRAKATCRSCRA 1052
Query: 932 LISNG--TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
L+ G TLCS C+ + + + + ++LE + RLW QCQ CQGS+ QDVLCTS+DC
Sbjct: 1053 LLPAGRTTLCSACEKDIDVHFQRELLKKRQLEDRYARLWAQCQRCQGSVMQDVLCTSKDC 1112
Query: 990 PIFYRRKKAQKDM 1002
PIFY RKK QKD+
Sbjct: 1113 PIFYMRKKVQKDL 1125
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 215/358 (60%), Gaps = 8/358 (2%)
Query: 51 PEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL 110
PE ++S + ++ R++ ARPP + S ++ +FQQLD+D + +
Sbjct: 84 PESQDSAFVDELGDMGTNGERISDVARPP-AKPMDSSKEAFVFQQLDLDSYLDVPLPGMP 142
Query: 111 PLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA 170
G+ I R+FGVT+ G+SV VHGF P+ Y P P + F L+ +++E
Sbjct: 143 GPQRGNVQIFRLFGVTKGGNSVLMHVHGFCPFIYTPAPANFTPSMLGEFKMALDKQIKET 202
Query: 171 NRNSK-VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDG 228
++K VP+ V +E+V K SI + +PFLKI + + R L++G I L
Sbjct: 203 TSSAKDVPEVVMMVEIVSKESIYGFHATGKRPFLKIYLVQHKFINPARRALEQGTITLSK 262
Query: 229 LGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR-----KTAKTLSYCQLEFDCL 283
LG S+ YESN+ LRFM++ +VG NW+EVP GKY+ T K +S Q E D
Sbjct: 263 LGTLSYEVYESNLELNLRFMVETQLVGCNWVEVPAGKYKFRSFSSTPKPVSLAQYELDVA 322
Query: 284 YSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFI 343
+ IS E E+ ++AP RILSFDIECAGRKG FPEP DPVIQ+AN+V ++GE +PF+
Sbjct: 323 FDAFISHPAEDEWQQIAPLRILSFDIECAGRKGVFPEPDKDPVIQIANMVQVEGESKPFV 382
Query: 344 RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
RNV TL +CAPIVG V++ +TE ++L +W F+RE DPD++ GYNI FDLP+L+ +
Sbjct: 383 RNVFTLGTCAPIVGSKVIACKTEIELLESWSAFVRECDPDIVTGYNITNFDLPFLMNR 440
>gi|348666766|gb|EGZ06593.1| hypothetical protein PHYSODRAFT_532354 [Phytophthora sojae]
Length = 1050
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/621 (61%), Positives = 469/621 (75%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H IISDLQ G + R RLAVYCLKDAYLP RLLDKL ++ N++EMARV+GVPI
Sbjct: 427 QKEDVPHGIISDLQRGTDDDRHRLAVYCLKDAYLPLRLLDKLSYLVNFIEMARVSGVPID 486
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV-KQAGSEQGTYEGATVLEARAGFYEKPIATL 518
FL+ RGQ IKV S LLRK K +LV+P + + +E YEGATV+E + FY PIATL
Sbjct: 487 FLIERGQQIKVFSMLLRKCKDASLVVPTLPRSQNNEDAGYEGATVIEPKKAFYSVPIATL 546
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DFASLYPSIM A+NLCYSTLV P D KL P ++PSG+ FV S +KGILP ILE
Sbjct: 547 DFASLYPSIMQAFNLCYSTLVAPGDVDKL--APGDYERSPSGDIFVTSKKKKGILPLILE 604
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
E+LAARK+AK D+ A DP+EKAV +GRQLALK+SANSVYGFTGA VGQ+PCI I+SS T
Sbjct: 605 EVLAARKQAKWDMNAATDPMEKAVQNGRQLALKVSANSVYGFTGAIVGQMPCIPIASSTT 664
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQ++ T++ VE +T GY+ +A+V+YGDTDSVM++FGV TVE AM L EAA
Sbjct: 665 AYGRQLLFRTREEVERIYTIANGYKADAQVVYGDTDSVMIKFGVDTVEEAMPLAEEAAKR 724
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PIKLEFEKVY+PYLL++KKRYAGL WT PEK+DK+D+KG+ETVRRDNCLLV+
Sbjct: 725 VSDIFPNPIKLEFEKVYFPYLLMNKKRYAGLLWTKPEKYDKLDSKGLETVRRDNCLLVRR 784
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKT--GDDYEVKAAH 816
+V L KIL++RD+PGA+ Y K+ ISDLL NR+D+SLLVITKGL KT DDY+VK AH
Sbjct: 785 MVESVLRKILINRDVPGAISYTKNVISDLLQNRIDISLLVITKGLKKTVDQDDYKVKQAH 844
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
ELAERMRKRD +AP +G+R+ YVII K Y+++EDP+Y LENNIPID YY++
Sbjct: 845 TELAERMRKRDPGSAPALGERIAYVIIDKGKATPLYDKAEDPVYALENNIPIDCDYYMKQ 904
Query: 877 QISKPLLRIFEPI--LKNASKELLSGDHT--RSISISTPSNSGIMKFAKRQLSCIGCKA- 931
Q+ PL RIFEPI L +LL+G HT RS + ++ G+M FA ++L C+GCKA
Sbjct: 905 QLQNPLERIFEPIIGLSKVKSDLLNGAHTLKRSKPVLKQNSGGMMNFAVKKLKCLGCKAP 964
Query: 932 LISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
L G LC C REAE++ + + V ELE LF RLWTQCQ CQGSLHQDVLC+SRDCPI
Sbjct: 965 LNGKGALCRSCVEREAEVFSRQLESVNELEHLFARLWTQCQNCQGSLHQDVLCSSRDCPI 1024
Query: 992 FYRRKKAQKDMAEAKLQLDRW 1012
FY+R K QKD+ EA+ L+R+
Sbjct: 1025 FYKRIKVQKDLGEAQASLERF 1045
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/349 (43%), Positives = 205/349 (58%), Gaps = 16/349 (4%)
Query: 68 FASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIG-------DSNRELLPL-----SSG 115
A++ + W R P+ + S S+ FQ +DID G E+ L +S
Sbjct: 4 IATKASAWPRKPMVTVDPS-ADSVAFQWIDIDMYDGPPLPANPKKGAEVPGLKASGGASQ 62
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
+AAIIR++GV+ EGHSV VHG PYFY CP L+ + + +R+S
Sbjct: 63 NAAIIRLYGVSMEGHSVLMHVHGVLPYFYCVCPDNFDESRCGEVRAALDAAVSQRDRDSS 122
Query: 176 VPQFVRHIEMVQ-KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
V +++V+ K SI YQ + KI +++P+ V R L+ G+ L G +++
Sbjct: 123 SAARVVGVQVVRDKMSIYGYQFDRYTTLFKIYLSMPSYVPKLRSALEGGLTLPGCDFRNY 182
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHP 292
TYESNV F LRFMID I G NW+E P G Y R TA+ S CQLE D Y +++S P
Sbjct: 183 QTYESNVPFILRFMIDEGIRGCNWVEAPKGAYSVRSTAQKKSLCQLEIDITYDNLVSHAP 242
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSC 352
EG++ K+AP RILSFDIEC GRKGHFPE DPVIQ+AN+V QG P IRNV L +C
Sbjct: 243 EGQWGKVAPLRILSFDIECMGRKGHFPEAEQDPVIQIANVVQEQGSHTPIIRNVFVLDTC 302
Query: 353 APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
PIVG VM FE E ++L W F++EVDPD++ GYNI FD+PYL+ +
Sbjct: 303 KPIVGAHVMEFEKEGEMLEKWARFVQEVDPDIITGYNIANFDIPYLLNR 351
>gi|78191525|gb|ABB29977.1| DNA-directed polymerase delta 1 [Homo sapiens]
Length = 1133
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/644 (60%), Positives = 486/644 (75%), Gaps = 32/644 (4%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVL--------EARAG-- 509
+LLSRGQ +KV+SQLLR+A + L++P VK G E Y GATV+ + RAG
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMHEGLLMPVVKSEGGED--YTGATVIGPLKGVRPQDRAGAA 602
Query: 510 ----------------FYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC 553
+Y+ PIATL F+SLYPSIMMA+NLCY+TL+ P A+KL L +
Sbjct: 603 WELLALTPGRGCSPPRYYDVPIATLGFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTEDQ 662
Query: 554 VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKIS 613
+TP+G+ FVK++++KG+LP+ILE LL+ARKRAKA+L + DPL + VLDGRQL LK+S
Sbjct: 663 FIRTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLRRQVLDGRQLGLKVS 722
Query: 614 ANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDT 673
ANSVYGFTGA VG+LPC+EIS SVT +GRQMIE TK+LVE K+T GY +A+V+YGDT
Sbjct: 723 ANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDT 782
Query: 674 DSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN 733
DSVM +FGV +V AM LGREAAD++SG F PI+LEFEKVY+PYLLISKKRYAGL +++
Sbjct: 783 DSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSS 842
Query: 734 -PEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRM 792
P+ D+MD KG+E VRRDNC LV NLVT L ++L+DRD GAV + + ISDLL NR+
Sbjct: 843 RPDAHDRMDCKGLEAVRRDNCPLVANLVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRI 902
Query: 793 DLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAY 852
D+S LVITK LT+ DY K AHVELAERMRKRD +AP++GDRVPYVII AAKG AY
Sbjct: 903 DISQLVITKELTRAASDYAGKQAHVELAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAY 962
Query: 853 ERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKE--LLSGDHTRSISIST 910
+SEDP++VLE+++PIDT YYLE Q++KPLLRIFEPIL E LL GDHTR ++ T
Sbjct: 963 MKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGDHTRRKTVLT 1022
Query: 911 PSNSGIMKFAKRQLSCIGCKALISN-GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWT 969
G++ FAKR+ CIGC+ ++S+ G +C C+ RE+ELY K VS + LE F RLWT
Sbjct: 1023 GKVGGLLAFAKRRNCCIGCRTVLSHQGAVCEFCQPRESELYQKEVSHLNALEERFSRLWT 1082
Query: 970 QCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWN 1013
Q Q CQGSLH+DV+CTSRDCPIFY RKK +KD+ + + L R+
Sbjct: 1083 QYQRCQGSLHEDVICTSRDCPIFYMRKKVRKDLEDQEQLLRRFG 1126
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 156/333 (46%), Positives = 212/333 (63%), Gaps = 6/333 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGHS 131
+W RP Q + ++FQQL+ID+ +G + P S GS ++R FGVT EG S
Sbjct: 78 RWLRP-TPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSHGSVPVLRAFGVTDEGFS 136
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC +HGF PYFY P G GP+ + + L + +R + V +E+ +
Sbjct: 137 VCCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDSRGGRELTGPAVLAVELCSRE 196
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
S+ Y PFL+I VALP +VA R +L++GI++ GLG SF YE+NV F +RFM+
Sbjct: 197 SMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMV 256
Query: 250 DCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
D +IVG NW+E+P GKY + + + CQLE D L+SD++S PEG + ++AP R+LSFD
Sbjct: 257 DTDIVGCNWLELPAGKYALRLKEKATQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFD 316
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D
Sbjct: 317 IECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEKEED 376
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 377 LLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 409
>gi|195442888|ref|XP_002069178.1| GK23632 [Drosophila willistoni]
gi|194165263|gb|EDW80164.1| GK23632 [Drosophila willistoni]
Length = 1093
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/624 (61%), Positives = 478/624 (76%), Gaps = 12/624 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLA+YCLKDAYLP RLL KLM I NY+EMARVTGVP+
Sbjct: 470 QKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLGKLMAIVNYMEMARVTGVPLE 529
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKVLSQLLRKAK K ++P+ GS++ YEGATV+E + G+Y PI+TLD
Sbjct: 530 SLLTRGQQIKVLSQLLRKAKTKGFIMPSYTSQGSDE-QYEGATVIEPKRGYYADPISTLD 588
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLN----LPPECVNKTPSGETFVKSNLQKGILPE 575
FASLYPSIMMA+NLCY+TL+ KL + + V TP+ FVK+ L++G+LPE
Sbjct: 589 FASLYPSIMMAHNLCYTTLILGGSKDKLKNKGLIQDDQVECTPANNYFVKAELRRGLLPE 648
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
ILE LLAARKRAKADLK KDP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS
Sbjct: 649 ILESLLAARKRAKADLKVEKDPFKRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISG 708
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SVT+YGR MIE TK VE +T GYE++A VIYGDTDSVMV FGV ++E +M+LGREA
Sbjct: 709 SVTAYGRTMIEMTKTEVETHYTRSNGYENDAVVIYGDTDSVMVNFGVKSLERSMELGREA 768
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A+ +S F+KPIKLEFEKVYYPYLLI+KKRYAGLY+T PE +DKMD KGIETVRRDN L
Sbjct: 769 AELVSSKFVKPIKLEFEKVYYPYLLINKKRYAGLYFTRPEAYDKMDCKGIETVRRDNSPL 828
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V NL+ CL K+L++R+ GAV Y K I+DLL NR+D+S LVITK L KT DY K A
Sbjct: 829 VANLMNSCLQKLLIERNPEGAVDYAKQVIADLLCNRIDISQLVITKELAKT--DYAAKQA 886
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
HVELA +M+KRD TAP +GDRVPYVI AAK AY+++EDP+YVLEN++PID +YYLE
Sbjct: 887 HVELAAKMKKRDPGTAPKLGDRVPYVICAAAKNTPAYQKAEDPLYVLENSVPIDANYYLE 946
Query: 876 NQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS 934
Q+SKPLLRIFEPIL + A LL G+HTR+ ++ G+ F R+ SC+GCK+L+
Sbjct: 947 QQLSKPLLRIFEPILGEKAESVLLKGEHTRTRTVVHSKVGGLAGFMTRKASCLGCKSLLP 1006
Query: 935 NG----TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
G +LC HC+ + +ELY + V + LE F RLWT+CQ CQGSLH++V+C++RDCP
Sbjct: 1007 KGYEQASLCPHCEPKMSELYQREVETKRGLEHSFSRLWTECQRCQGSLHEEVICSNRDCP 1066
Query: 991 IFYRRKKAQKDMAEAKLQLDRWNF 1014
IFY R+K + ++ + ++ R+
Sbjct: 1067 IFYMRQKVRMELGTQEKRVQRFGL 1090
Score = 303 bits (775), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 220/355 (61%), Gaps = 11/355 (3%)
Query: 54 EESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLS 113
E++L++ D + Q + R ++ A P L +I FQQLD++ +G +
Sbjct: 44 EQTLLMGDGPENQQTSERWSRPAPPKLDPSR----DNIEFQQLDVENYLGQPLPGMPGAQ 99
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
G ++R+FGVT G+SVCC VHGF PYFYI+ P F + L+ ++ R+
Sbjct: 100 LGPVPVVRMFGVTMAGNSVCCHVHGFCPYFYIAAPSSFEDRHCESFQKSLDQKVIADMRS 159
Query: 174 SK--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
+K V + V +E+V++ +I YQ + Q ++KI V LP VA+ +L + I + +
Sbjct: 160 NKDNVQEAVLLVELVERLNIHGYQGDEKQRYIKITVTLPRFVAAASRLLKKEIIMSEIDF 219
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR---KTAKTL--SYCQLEFDCLYSD 286
+ +E+N+ F +RFM+D +VG NWIE+P G++R ++K L S CQ+E D Y
Sbjct: 220 QDCRAFENNIDFDIRFMVDTGVVGCNWIELPKGEWRLRSASSKPLPESRCQIEVDIAYDK 279
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
IS PEGE+SK+APFRILSFDIECAGRKG FPE DPVIQ+AN+V QGE +PFIRN+
Sbjct: 280 FISHEPEGEWSKVAPFRILSFDIECAGRKGIFPEAKMDPVIQIANMVINQGESEPFIRNI 339
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
TLK CAPI+G V+ + E +L W F+REVDPD++ GYNI FD+PYLI +
Sbjct: 340 FTLKECAPIIGSQVLCHDQETQLLDKWSSFVREVDPDILTGYNINNFDIPYLINR 394
>gi|324120748|dbj|BAJ78765.1| DNA polymerase delta catalytic subunit [Vespa analis insularis]
Length = 1105
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/618 (61%), Positives = 479/618 (77%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGNA+TRRRLAVYCLKDAYLP RLLDKLM I Y+EMARVTGV +
Sbjct: 486 QKEDVHHSIITDLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSLM 545
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK ++KN ++P GS++ +EG TV+E + G+Y PIATLD
Sbjct: 546 CLLTRGQQIKVVSQLLRKMREKNYLMPVHTGRGSDE-QFEGGTVIEPKRGYYSDPIATLD 604
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSI+MA+NLCY+TL+T E K L + V +TPS FVKS ++KG+LPEILE
Sbjct: 605 FSSLYPSIIMAHNLCYTTLLTSEKQNKYGLKIDEVTRTPSNSLFVKSTVKKGLLPEILEN 664
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK AKA+LK+ DPL++ VLDGRQ ALK+SANSVYGFTGA +G+LPC+EIS+SVT+
Sbjct: 665 LLTARKVAKAELKKETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLEISASVTA 724
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK VE + GY+++A VIYGDTDSVMV FGV +E AM+LG+EAA+Y+
Sbjct: 725 YGRTMIEKTKHEVEQHYCINNGYKNDAVVIYGDTDSVMVNFGVKKIEEAMELGKEAAEYV 784
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ FI PIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV +
Sbjct: 785 TSKFINPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDKMDCKGLETVRRDNCPLVAKM 844
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DR+ A+ Y K ISDLL NR+D+S L+ITK LTKT DY K AHVEL
Sbjct: 845 MNTCLEKLLIDRNPEDAIDYAKQIISDLLCNRIDISQLIITKELTKT--DYAAKQAHVEL 902
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRDA TAP +GDRVPYV I A+KG AY+++EDPI+VLEN+IPIDT YYLENQ+S
Sbjct: 903 AAKMKKRDAGTAPKLGDRVPYVFISASKGTPAYQKAEDPIFVLENSIPIDTTYYLENQLS 962
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS---- 934
KPL+RIFEPIL + A LL GDHTR+ + T + F +++ +CIGCKA++
Sbjct: 963 KPLVRIFEPILGEKAQSLLLKGDHTRTKIVVTSKVGALAAFTRKKETCIGCKAVLQPKRE 1022
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+C HC+ REAE+Y + ++LE F RLWT+CQ CQGSLHQ+VLCT+RDCPIFY
Sbjct: 1023 KMAVCEHCESREAEIYQTEILAERKLEEKFCRLWTECQRCQGSLHQEVLCTNRDCPIFYM 1082
Query: 995 RKKAQKDMAEAKLQLDRW 1012
RKK Q ++ +++R+
Sbjct: 1083 RKKIQLELDTQIKRIERF 1100
Score = 308 bits (789), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/338 (44%), Positives = 215/338 (63%), Gaps = 12/338 (3%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
AKW+RP Q ++ FQQ+DID+ IG + G AI+R+FGVT +G+S+
Sbjct: 76 AKWSRPS-PPDLNPQIDTLTFQQIDIDHYIGQPLPGMPGSKFGPVAIMRMFGVTEQGNSI 134
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE---ANRNSKVPQFVRHIEMVQKR 189
CC VHGF PY +++ PQ F L+ +++ +N+N+ V + + +E+V K+
Sbjct: 135 CCHVHGFCPYLFVTAPQNFTNAHCKPFKDALDQAVKKDMKSNQNT-VQEAILAVEIVYKQ 193
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
++ Y FLKI VALP +ASC+ + ++ I + ++ +E+N+ F +RFM+
Sbjct: 194 TVYTYTGNDKNAFLKITVALPKFIASCKRLFEKEIVYNEFN-HTYTPFETNIDFDIRFMV 252
Query: 250 DCNIVGGNWIEVPV------GKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFR 303
D ++VG WIE+P G++ T +S CQLE D + I+ EGE+SK+APFR
Sbjct: 253 DTSVVGCCWIELPPNTWKLRGQHGHTLPVISRCQLEIDIAWDAFIAHPAEGEWSKVAPFR 312
Query: 304 ILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSF 363
ILSFDIECAGRKG FPEP HDPVIQ+AN+V QGE +PF+RN+ TL +CAPIVG V+SF
Sbjct: 313 ILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGETEPFLRNIFTLNTCAPIVGCQVLSF 372
Query: 364 ETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E+++L W +FIR++DPD+ GYNI FD PYLI +
Sbjct: 373 NKEQELLQKWAEFIRQLDPDIFTGYNINNFDFPYLINR 410
>gi|324120702|dbj|BAJ78742.1| DNA polymerase delta catalytic subunit [Isonychia japonica]
Length = 1008
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/619 (60%), Positives = 474/619 (76%), Gaps = 7/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLAVYC+KDA+LP +LLDKLM I NY+EMARVTGV +
Sbjct: 386 QKEDVHHSIITDLQNGDDQTRRRLAVYCVKDAFLPLKLLDKLMCIINYMEMARVTGVSLL 445
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKAK+ + VIP G +EGATV+E + G+Y++PI TLD
Sbjct: 446 CLLTRGQQIKVVSQLLRKAKEHDYVIPVYSVRGGNDEQFEGATVIEPKKGYYKQPIVTLD 505
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P KL L + TP+ F+K++ +KG+LPEILE
Sbjct: 506 FSSLYPSIMMAHNLCYTTLLQPGTKEKLGLTSDQYTVTPNENCFLKASQRKGLLPEILES 565
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AK DLK+ DPL + VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 566 LLSARKKAKEDLKKETDPLRRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 625
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE T+ VE KF GY H++ VIYGDTDSVM++FGV + AM+LGREAA+Y+
Sbjct: 626 YGRTMIEQTRSEVEQKFCLANGYAHDSTVIYGDTDSVMIKFGVEDLPTAMELGREAAEYV 685
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FIKPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDNC LV N+
Sbjct: 686 SSKFIKPIKLEFEKVYFPYLLINKKRYAGLYYTRPDKYDKMDCKGIETVRRDNCPLVANI 745
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL +L++RD GAV+YVK ISDLL NR+D+S LVITK L K DDY+ K AHVEL
Sbjct: 746 MNTCLKMLLIERDPDGAVRYVKEMISDLLCNRLDISQLVITKELAK--DDYKAKQAHVEL 803
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AE+ +KRD TAP +GDRVPYVI AAK AY +SEDPIYVLENN+ IDT YYL NQ+
Sbjct: 804 AEKXKKRDPGTAPKLGDRVPYVITAAAKNTPAYLKSEDPIYVLENNVSIDTDYYLHNQLE 863
Query: 880 KPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---S 934
KPLLRIF PIL + E LL G+HT S + +T + F ++ +C+GC+ + +
Sbjct: 864 KPLLRIFSPILGESKAEATLLKGEHTLSKTKTTSKVGALTAFTVKREACLGCRTPLPANT 923
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
G +C+HC +++ +Y ++++Q LE F RLWTQCQ CQGSLH++V+CTSRDCPIFY
Sbjct: 924 QGAVCAHCLPKQSAIYQVEMAKLQLLEKSFSRLWTQCQRCQGSLHEEVICTSRDCPIFYM 983
Query: 995 RKKAQKDMAEAKLQLDRWN 1013
RKK Q D++ + ++R+
Sbjct: 984 RKKVQMDLSSQGITIERFG 1002
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/298 (44%), Positives = 189/298 (63%), Gaps = 10/298 (3%)
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
SG+ +IR+FGVT +G+SVCC VHGF PYF++ P F L + R+
Sbjct: 13 SGAVPVIRMFGVTEQGNSVCCHVHGFAPYFFVLVPSNFEEKHCRPFKDALNRTVMADLRS 72
Query: 174 S--KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
+ KV + V E+++K +I ++ PFLKI VALP ++ C+ IL++ LGM
Sbjct: 73 NPHKVSEAVLGAELMKKENIYGFRGTGKVPFLKITVALPEFLSKCKRILEQENIFPALGM 132
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL--------SYCQLEFDCL 283
+ + +E+N+ F +RFM D ++G +W+E+P ++ T+ S CQ+E D
Sbjct: 133 QDYSCFETNIDFDIRFMADVEMMGCSWVELPPKMWKPRGTTIGSSQLPVVSRCQIEVDVS 192
Query: 284 YSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFI 343
+ I++ PEGE+ ++APFRILSFDIECAGRKG FPEP HDPVIQ+AN+V QG +PFI
Sbjct: 193 WESIVAHAPEGEWQRVAPFRILSFDIECAGRKGIFPEPQHDPVIQIANVVINQGAAEPFI 252
Query: 344 RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+NV TL CA IVG V+S +TE +L W +FIREVDPD++ GYNI FDL YL+ +
Sbjct: 253 KNVFTLGECAAIVGTHVLSHKTEVSLLEQWANFIREVDPDIITGYNINNFDLFYLLSR 310
>gi|301090780|ref|XP_002895592.1| DNA polymerase delta catalytic subunit [Phytophthora infestans T30-4]
gi|262097769|gb|EEY55821.1| DNA polymerase delta catalytic subunit [Phytophthora infestans T30-4]
Length = 1609
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/621 (61%), Positives = 467/621 (75%), Gaps = 10/621 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H IISDLQ G + R RLAVYCLKDAYLP RLLDKL ++ N++EMARV+GVPI
Sbjct: 427 QKEDVPHGIISDLQRGTDDDRHRLAVYCLKDAYLPLRLLDKLSYLVNFIEMARVSGVPID 486
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV-KQAGSEQGTYEGATVLEARAGFYEKPIATL 518
FL+ RGQ IKV S LLRK K +LV+P + + +E YEGATV+E + FY PIATL
Sbjct: 487 FLIERGQQIKVFSMLLRKCKDASLVVPTLPRSQNNEDVGYEGATVIEPKKAFYSVPIATL 546
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DFASLYPSIM A+NLCYSTLV P D KL P K+PSG+ FV S +KGILP ILE
Sbjct: 547 DFASLYPSIMQAFNLCYSTLVAPGDVDKL--APGDYEKSPSGDIFVTSKKKKGILPLILE 604
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
E+LAARK+AK D+ A DP+E AV +GRQLALK+SANSVYGFTGA VGQ+PCI I+SS T
Sbjct: 605 EVLAARKQAKRDMNAATDPMEIAVQNGRQLALKVSANSVYGFTGAIVGQMPCIPIASSTT 664
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQ++ T++ VE ++T GY+ +A+V+YGDTDSVM++FGV TVE AM L EAA
Sbjct: 665 AYGRQLLFRTREEVEREYTIANGYKADAQVVYGDTDSVMIKFGVDTVEEAMPLAEEAAKR 724
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PIKLEFEKVY+PYLL++KKRYAGL WT PE +DK+D+KG+ETVRRDNCLLV+
Sbjct: 725 VSDIFPNPIKLEFEKVYFPYLLMNKKRYAGLLWTKPETYDKLDSKGLETVRRDNCLLVRR 784
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKT--GDDYEVKAAH 816
+V L KIL++RD+P A+ Y K+ ISDLL NR+D+SLLVITKGL KT DDY+VK AH
Sbjct: 785 MVDTVLRKILINRDVPSAISYTKNIISDLLQNRIDISLLVITKGLKKTVDQDDYKVKQAH 844
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
ELAERMRKRD +AP +G+R+ YVII K YE++EDP+Y LENNIPID YY++
Sbjct: 845 TELAERMRKRDPGSAPALGERIAYVIIDKGKATPLYEKAEDPVYALENNIPIDCDYYMKQ 904
Query: 877 QISKPLLRIFEPI--LKNASKELLSGDHT--RSISISTPSNSGIMKFAKRQLSCIGCKA- 931
Q+ PL RIFEPI L +LL+G HT RS + ++ G+M FA ++L C+GCKA
Sbjct: 905 QLQNPLERIFEPIIGLSKVKSDLLNGAHTLKRSKPVLKQNSGGMMNFAVKKLKCLGCKAP 964
Query: 932 LISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
L G LC C REAE+Y + + V ELE +F RLWTQCQ CQGSLHQDVLC+SRDCPI
Sbjct: 965 LNGKGALCRSCVEREAEVYSRQLLSVNELEHMFARLWTQCQNCQGSLHQDVLCSSRDCPI 1024
Query: 992 FYRRKKAQKDMAEAKLQLDRW 1012
FY+R K QKD+ EA+ L+R+
Sbjct: 1025 FYKRIKVQKDLGEAQASLERF 1045
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 153/349 (43%), Positives = 207/349 (59%), Gaps = 16/349 (4%)
Query: 68 FASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGD----SNRELLPL--------SSG 115
+++ + W R L+ S S+ FQ +DID G + ++ P+ SS
Sbjct: 4 ISTKASSWPRKSLAPIDPS-ADSVSFQWIDIDMYDGPPLKMNPKKGAPVPGLKASDDSSQ 62
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
+AAIIR++GVT EGHSV VHG PYFY CP L+ + + +R+S
Sbjct: 63 NAAIIRLYGVTMEGHSVLMHVHGVLPYFYAVCPDNFDESKCGEVRAALDAAVSQRDRDSS 122
Query: 176 VPQFVRHIEMVQ-KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
V +++V+ K SI YQ + KI +++P+ V R L+ G+ L G +++
Sbjct: 123 SNARVVGVQVVRDKMSIYGYQFDRRTTLFKIFLSMPSYVPKLRSALEGGLTLPGCDFRNY 182
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHP 292
TYESNV F LRFMID I G NW+E P G Y R A+ S CQLE D Y +++S P
Sbjct: 183 QTYESNVPFILRFMIDEEIRGCNWVEAPTGTYSVRSAAQKKSLCQLEIDITYDNLVSHAP 242
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSC 352
EG++ K+APFRILSFDIEC GRKGHFPE DPVIQ+AN+V QG P IRNV L +C
Sbjct: 243 EGKWGKVAPFRILSFDIECMGRKGHFPEAEQDPVIQIANVVQEQGSHTPIIRNVFVLDTC 302
Query: 353 APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
PIVG VM FE E D+L +W F++EVDPD++ GYNI FD+PY++ +
Sbjct: 303 KPIVGAHVMEFEKEGDMLESWARFVQEVDPDIITGYNIANFDIPYVLNR 351
>gi|324120762|dbj|BAJ78772.1| DNA polymerase delta catalytic subunit [Papilio polytes]
Length = 1082
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/603 (63%), Positives = 475/603 (78%), Gaps = 9/603 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQN N +TRRRLA+YCLKDAYLP +LL+KLM I N +EMARVTGVP+
Sbjct: 466 QKEDVHHSIISDLQNENEQTRRRLAMYCLKDAYLPLKLLNKLMCIINSMEMARVTGVPLV 525
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
L +RGQ IKV+SQLLRKAK+ +IP GS+ +EGATV+E + G+Y PI+TLD
Sbjct: 526 CLQTRGQQIKVVSQLLRKAKEAGYLIPAYHGQGSDD-QFEGATVIEPKRGYYADPISTLD 584
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMA+NLCY+TLV P + LN + + TP+ FVKSN++KG+LPEILE
Sbjct: 585 FASLYPSIMMAHNLCYTTLVPPNMQKDLN--SDDITITPTKNMFVKSNIRKGLLPEILES 642
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AKADLK+ KDP +++VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 643 LLAARKKAKADLKDEKDPFKRSVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 702
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK VE K+T GY+ +A VIYGDTDSVMV+FGV T+E +M+LGREAA+++
Sbjct: 703 YGRTMIEFTKSEVEKKYTKSNGYKEDAVVIYGDTDSVMVKFGVKTLEESMELGREAAEFV 762
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ F+ PIKLEFEKVYYPYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDN LV N+
Sbjct: 763 TSKFVXPIKLEFEKVYYPYLLINKKRYAGLYFTRPDKYDKMDCKGIETVRRDNSPLVSNM 822
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
++ CL K+L+DRD GAV Y K ISDLL NR+D+S LVITK LTK +DY K AHVEL
Sbjct: 823 MSTCLQKLLIDRDPEGAVNYAKQIISDLLCNRIDISQLVITKELTK--NDYAAKQAHVEL 880
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD TAP +GDRVPYV+ AAK AY ++EDPIYVLEN++PID +YYLENQ+S
Sbjct: 881 AAKMKKRDPGTAPKLGDRVPYVLCCAAKNTPAYMKAEDPIYVLENSVPIDFNYYLENQLS 940
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT- 937
KPLLRIFEPIL + ++ LL G+HT + ++ T + F K++ CIGCK+++ N T
Sbjct: 941 KPLLRIFEPILGDKAESLLLKGEHTMTKAMVTSKVGALAAFTKKKEKCIGCKSVMPNDTK 1000
Query: 938 --LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LC+HC +E +LY + ++++L+ F +LWT+CQ CQGSLH++VLCT+RDC IFY R
Sbjct: 1001 KALCNHCLSKEGQLYITEMFKLRQLQDKFSKLWTECQRCQGSLHEEVLCTNRDCTIFYMR 1060
Query: 996 KKA 998
KK
Sbjct: 1061 KKV 1063
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/414 (41%), Positives = 245/414 (59%), Gaps = 37/414 (8%)
Query: 1 MNRSNGSARKRPPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLL----PEDEES 56
MN+ G K PPP +S + P + +D +V D L PE++ +
Sbjct: 1 MNK--GKQFKGPPPKKFKSQDDDDDNEVPCS--FEDTLAGMEVEFDSPELIGEGPENQST 56
Query: 57 LILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGS 116
I KW+RP + ++ I+FQQL+ID+ G + G
Sbjct: 57 NI---------------KWSRPNIPQLDPNK-DIIVFQQLEIDHYNGQPLAGMPGSQLGP 100
Query: 117 AAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQG----MGPDDISHFHQILEGRMREANR 172
I+R++GVT EG+SVCC VHGF PYFY++ P M D + ++++ +R
Sbjct: 101 VPIMRMYGVTMEGNSVCCHVHGFTPYFYVTVPSNFTDSMCNDMKINLNKVILEDLRSNKD 160
Query: 173 NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK 232
N + + V + ++Q RSIMYY+ F ++ VALP ++A+ + ++D+ GL
Sbjct: 161 N--IRETVLEVRLMQARSIMYYKGDVDIRFARVSVALPRLIAAAKRLIDKQPPSFGLLDP 218
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY-----RKTAKTLSYCQLEFDCLYSDI 287
SF YE+N+ F +RFM+D N+VG +WIE+PVGK+ K S CQ+E D +++
Sbjct: 219 SF--YETNIDFDIRFMVDTNVVGCSWIELPVGKWLIRSKDSKVKPESRCQIEVDVAWNNF 276
Query: 288 ISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVM 347
I+ PEGE+SK+APFRILSFDIECAGRKG FPEP HDPVIQ+A++V QGE +P++RNV
Sbjct: 277 IAHQPEGEWSKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIASMVVRQGETEPYLRNVF 336
Query: 348 TLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
TL +CAPIVG V+SF++E ++L W DF RE+DPD++ GYNI FD PYLI +
Sbjct: 337 TLNTCAPIVGSQVLSFQSESEMLARWADFFRELDPDIITGYNISNFDWPYLINR 390
>gi|109125666|ref|XP_001116065.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 2 [Macaca
mulatta]
Length = 1327
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/597 (63%), Positives = 470/597 (78%), Gaps = 6/597 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A + L++P V+ G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMHEGLLMPVVRSEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDTHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 962
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR+ CIGC+ ++++
Sbjct: 963 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLNHQ 1022
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CT D P F
Sbjct: 1023 GAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTRLDGPHF 1079
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 215/336 (63%), Gaps = 12/336 (3%)
Query: 74 KWARP---PLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTRE 128
+W RP PL Q + ++FQQL+ID+ +G + PLS GS ++R FGVT E
Sbjct: 78 RWHRPTPPPLDP----QTEPLIFQQLEIDHYVGPAQPVPGGPPLSRGSVPVLRAFGVTDE 133
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMV 186
G SVCC +HGF PYFY P G P+ + + L + NR K V +E+
Sbjct: 134 GVSVCCHIHGFAPYFYTPAPPGFEPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELC 193
Query: 187 QKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALR 246
+ S+ Y PFL+I +ALP +VA R +L++GI++ GLG SF YE+NV F +R
Sbjct: 194 SRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIR 253
Query: 247 FMIDCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRIL 305
FM+D +IVG NW+E+P GKY + K + CQLE D L+SD++S PEG + ++AP R+L
Sbjct: 254 FMVDTDIVGCNWLELPAGKYTLRLKKKTTQCQLEADVLWSDVVSHPPEGPWQRIAPLRVL 313
Query: 306 SFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFET 365
SFDIECAGRKG FPEP DPVIQ+ +L GE++PF+R +TL+ CAPI+G V S+E
Sbjct: 314 SFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTLRPCAPILGAKVQSYEK 373
Query: 366 ERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 374 EEDLLQAWSTFIRVMDPDVITGYNIQNFDLPYLISR 409
>gi|323454621|gb|EGB10491.1| hypothetical protein AURANDRAFT_23037 [Aureococcus anophagefferens]
Length = 1057
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/629 (59%), Positives = 466/629 (74%), Gaps = 20/629 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQ G E RRRLAVYCLKD+YL +L+ KL + NYVEMARVTGVP+
Sbjct: 431 QKEDVHHSIIADLQRGTDEDRRRLAVYCLKDSYLVIQLMTKLAVLINYVEMARVTGVPLD 490
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSE-QGTYEGATVLEARAGFYEKPIATL 518
FLLSRGQ IKV S LLR+ + NL++PN+ + G++ +EGATV+E + FYE+PIATL
Sbjct: 491 FLLSRGQQIKVFSMLLRRCRASNLLVPNLAKHGNDGDAKFEGATVIEPKKAFYEEPIATL 550
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLP----------PECVNKTPSGETFVKSNL 568
DFASLYPSIM AYNLCYST++T +DA + + P P+CV+ FV +
Sbjct: 551 DFASLYPSIMQAYNLCYSTILTKQDAER-HFPGGADTAYQAGPQCVDGV---HHFVTAKT 606
Query: 569 QKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQL 628
++G+LP+IL +LLAARKRAKAD+K+A DP++KAV +GRQLALKISANSVYGFTGA VGQL
Sbjct: 607 KRGVLPQILADLLAARKRAKADMKKATDPMDKAVQNGRQLALKISANSVYGFTGAAVGQL 666
Query: 629 PCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAA 688
PC+ I+S+VT+YGR ++ TK VE +T GY +AEV+YGDTDSVMV FG V A
Sbjct: 667 PCLPIASTVTAYGRTLLHRTKDFVESTYTKENGYAADAEVVYGDTDSVMVNFGFGDVAAT 726
Query: 689 MKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
+ A ++ F P+KLEFEKVY+PYLL++KKRYAGL WT PE D MD KG+ETV
Sbjct: 727 LPKAEVVAAEVTKIFPPPVKLEFEKVYFPYLLMNKKRYAGLLWTRPETHDYMDCKGLETV 786
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRDNCLLV+ L+ CL KI+++RD A+ Y K I DLL N++D+SLLVITK L+K D
Sbjct: 787 RRDNCLLVRQLIDGCLRKIIIERDTNAAIAYAKRAIGDLLQNKIDISLLVITKSLSKEAD 846
Query: 809 --DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNI 866
DY+ K+ H ELA+RMR RD TAPNVGDRVPYVI++A KG Y++SEDP+YVLENN+
Sbjct: 847 SKDYKAKSGHAELAKRMRARDPGTAPNVGDRVPYVIVQAPKGTATYDKSEDPVYVLENNL 906
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTP--SNSGIMKFAKRQL 924
PID YYLENQ+SKPL RIFEPI+ N S LL GDHTR ++ TP GIM FAK+QL
Sbjct: 907 PIDASYYLENQLSKPLTRIFEPIIPNTS-NLLHGDHTRVVAKPTPVARKGGIMMFAKKQL 965
Query: 925 SCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLC 984
C+GCKA I GT+C HCK RE E++ K V V E F +LWT CQ CQGSLHQDVLC
Sbjct: 966 QCLGCKAKIDEGTVCDHCKPREPEIFLKRVRDVNAHERTFAKLWTNCQRCQGSLHQDVLC 1025
Query: 985 TSRDCPIFYRRKKAQKDMAEAKLQLDRWN 1013
++ DCP+FY+RKK Q D+ + ++ L R++
Sbjct: 1026 SNSDCPVFYKRKKVQTDLRDTQVHLARFD 1054
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/345 (39%), Positives = 198/345 (57%), Gaps = 22/345 (6%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGD------SNRELLPLSSGSAA-IIRIFGVT 126
K+ RP +G ++ FQ ID GD + +P S ++R++GVT
Sbjct: 11 KFLRPKPKAG-----GTVAFQWTSIDMYTGDPLATHPRQGQRVPGSRNRPVPVVRLYGVT 65
Query: 127 REGHSVCCKVHGFEPYFYISCPQGMGPDD---ISHFHQILEGRMREA---NRNSKVPQFV 180
+G SVC HGF PY + S P D ++ Q L+G +R+ ++ Q V
Sbjct: 66 GDGASVCAHCHGFTPYCFSSAPLAFDESDAGNVAKLQQALDGALRQRCSRGQDRACAQLV 125
Query: 181 RHIEMVQ-KRSIMYYQQQKSQP-FLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
+E+V+ KRSIM YQ ++ F KI VALPT + + + +L G+ + G+G T+E
Sbjct: 126 LGVEVVRDKRSIMGYQPDGARACFFKIYVALPTQIPALKKVLQDGVNVPGVGHSQLQTFE 185
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEF 296
SNV F LRFMID I G NW+E P G Y R + C LE D ++ ++S P+G +
Sbjct: 186 SNVPFILRFMIDNEIQGCNWVEAPAGAYAARSGGAKKTRCDLEIDVVFDSLVSHAPDGPW 245
Query: 297 SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
+K+AP RI++ DIEC GRKGHFPEP DPVIQ++ +V +QG QP + + TL C I
Sbjct: 246 AKLAPLRIMATDIECMGRKGHFPEPEKDPVIQISCVVQVQGAAQPMCQVIFTLDGCTAIN 305
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
G +V++ +TE ++L W F+R VDPD++ GYN FD+PYL+++
Sbjct: 306 GAEVVTSKTEPELLKKWAAFVRLVDPDIITGYNTQNFDIPYLLKR 350
>gi|431920730|gb|ELK18503.1| DNA polymerase delta catalytic subunit [Pteropus alecto]
Length = 1109
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/620 (61%), Positives = 476/620 (76%), Gaps = 8/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N +EMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAMEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLARGQQVKVVSQLLRQAMREGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + +TP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELARETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY NA+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTIESGYSANAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV +V+ ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 843 LVTASLRRLLIDRDPKGAVAHVQDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++P+DT YYLE Q+
Sbjct: 903 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPVDTQYYLEQQL 962
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG 936
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR CIGC+ ++S+
Sbjct: 963 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRHSCCIGCRTVLSHQ 1022
Query: 937 TLC---SHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
+ VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY
Sbjct: 1023 GEWGPKAWPPTLRPPPPSPGVSHLSALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFY 1082
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
RKK +KD+ + + L R+
Sbjct: 1083 MRKKVRKDLQDQEQLLRRFG 1102
Score = 328 bits (842), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 162/342 (47%), Positives = 223/342 (65%), Gaps = 16/342 (4%)
Query: 73 AKWARP---PLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL---PLSSGSAAIIRIFGVT 126
A+W RP PL Q + ++FQQL+ID+ +G + R L P S+ S ++R FGVT
Sbjct: 77 ARWLRPAPPPLDP----QTEPLIFQQLEIDHYVGLA-RPLAGAPPPSNHSVPVLRAFGVT 131
Query: 127 REGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIE 184
EG SVCC +HGF PYFY P G GP+ +S Q L + +R K V +E
Sbjct: 132 DEGVSVCCHIHGFAPYFYTPAPPGFGPEHLSGLQQELNTAISRDHRGGKELTGPAVLAVE 191
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFA 244
+ + S+ Y PFL+I +ALP +VA R +L++G+++ GLG SF YE+NV F
Sbjct: 192 LCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGVRVVGLGTPSFAPYEANVDFE 251
Query: 245 LRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPF 302
+RFM+D +IVG NW+E+P GKY R KT + CQLE D L+SD++S PEG++ ++AP
Sbjct: 252 IRFMVDADIVGCNWLELPAGKYVLRPEGKT-TLCQLEVDVLWSDVVSHPPEGQWQRIAPL 310
Query: 303 RILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMS 362
R+LSFDIECAGRKG FPEP DPVIQ+ +L GE++PF+R +TL+SCAPI+G V S
Sbjct: 311 RVLSFDIECAGRKGIFPEPEQDPVIQICSLGLRWGEQEPFLRLALTLRSCAPILGAQVQS 370
Query: 363 FETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
+E E ++L AW FIR +DPD++ GYNI FDLPYL+ + +
Sbjct: 371 YEREEELLQAWSTFIRTMDPDIITGYNIQNFDLPYLLSRAQI 412
>gi|125977976|ref|XP_001353021.1| GA19253 [Drosophila pseudoobscura pseudoobscura]
gi|54641772|gb|EAL30522.1| GA19253 [Drosophila pseudoobscura pseudoobscura]
Length = 1092
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/612 (62%), Positives = 468/612 (76%), Gaps = 12/612 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLA+YCLKDAYLP RLL+KLM I NY+EMARVTGV +
Sbjct: 469 QKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLEKLMAIVNYMEMARVTGVSLE 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKVLSQLLRKAK K ++P+ GS++ YEGATV+E + G+Y PI+TLD
Sbjct: 529 CLLTRGQQIKVLSQLLRKAKTKGYIMPSYTPQGSDE-QYEGATVIEPKRGYYADPISTLD 587
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKL----NLPPECVNKTPSGETFVKSNLQKGILPE 575
FASLYPSIMMA+NLCY+TLV KL L E V +TP+ FVKS +++G+LPE
Sbjct: 588 FASLYPSIMMAHNLCYTTLVLGGSREKLREKDGLQDEQVVRTPANNYFVKSEVRRGLLPE 647
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
ILE LLAARKRAK DLK DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS
Sbjct: 648 ILESLLAARKRAKNDLKVETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISG 707
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SVT+YGR MIE TK VE +T GYE++A VIYGDTDSVMV FGV T+E +M+LGREA
Sbjct: 708 SVTAYGRTMIELTKNEVESHYTRENGYENDAVVIYGDTDSVMVNFGVKTLERSMELGREA 767
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A+ +S F+ PIKLEFEKVYYPYLLI+KKRYAGLY+T PE +DKMD KGIETVRRDN L
Sbjct: 768 AELVSAKFVHPIKLEFEKVYYPYLLINKKRYAGLYFTRPEAYDKMDCKGIETVRRDNSPL 827
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V NL+ CL K+L++RD GAV Y K I+DLL NR+D+S LVITK L KT DY K A
Sbjct: 828 VANLMNSCLQKLLIERDPDGAVTYAKQVIADLLCNRIDISQLVITKELAKT--DYAAKQA 885
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
HVELA +M+KRD TAP +GDRVPYVI AAK AY ++EDP+YVLEN++PID YYLE
Sbjct: 886 HVELAAKMKKRDPGTAPKLGDRVPYVICAAAKNTPAYAKAEDPLYVLENSVPIDATYYLE 945
Query: 876 NQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS 934
Q+SKPLLRIFEPIL + A LL G+HTR+ ++ T G+ F ++ +C+GCK L+
Sbjct: 946 QQLSKPLLRIFEPILGEKAESILLKGEHTRTRTVVTSKVGGLAGFMTKKSACLGCKTLMP 1005
Query: 935 NG----TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
G LC HC+ R +ELY K V + LE F RLWT+CQ CQGSLH++V+C++RDCP
Sbjct: 1006 KGYEKACLCPHCEPRMSELYQKEVGAKRGLEETFARLWTECQRCQGSLHEEVICSNRDCP 1065
Query: 991 IFYRRKKAQKDM 1002
IFY R+K + ++
Sbjct: 1066 IFYMRQKVRMEL 1077
Score = 295 bits (756), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 223/384 (58%), Gaps = 11/384 (2%)
Query: 25 QATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGY 84
QA P P D+E E E +++L+L + + Q + R ++ A P L
Sbjct: 14 QAKKPRNPDEDEEMDFEAELAAFENSEELDQTLLLGEGPENQQTSERWSRPAPPKLDPS- 72
Query: 85 VSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFY 144
++ FQQLD++ +G + G ++R+FGVT +G+SVCC VHGF PYFY
Sbjct: 73 ---TDNLEFQQLDVENYMGQPLPGMPGAQLGPVPVVRMFGVTMQGNSVCCHVHGFCPYFY 129
Query: 145 ISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPF 202
I P + L+ + RN+K V + V +E+V+K SI Y + Q +
Sbjct: 130 IEAPTKFEEYHCEKLQKSLDQKTIADIRNNKDNVQEAVLMVELVEKLSIHGYNGDQKQRY 189
Query: 203 LKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP 262
+KI V LP VA+ +L + + + + + +E+N+ F +RFM+D +VG NWIE+P
Sbjct: 190 IKITVTLPRFVAAASRLLKKEVIMAEIDFQDCRAFENNIDFDIRFMVDTGVVGCNWIELP 249
Query: 263 VGKYR---KTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH 317
G +R +K L S CQ+E D + IS PEGE+SK+APFRILSFDIECAGRKG
Sbjct: 250 QGHWRLRSGNSKPLPESRCQIEVDVAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGI 309
Query: 318 FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFI 377
FPE DPVIQ+AN+V QGE +PFIRNV TL CAPI+G V+ + E +L W F+
Sbjct: 310 FPEAKMDPVIQIANMVIRQGEPEPFIRNVFTLNVCAPIIGSQVLCHDKETQMLDKWSAFV 369
Query: 378 REVDPDVMIGYNICKFDLPYLIEK 401
REVDPD++ GYNI FD+PYLI +
Sbjct: 370 REVDPDILTGYNINNFDIPYLINR 393
>gi|149056044|gb|EDM07475.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_b
[Rattus norvegicus]
Length = 1099
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/590 (64%), Positives = 467/590 (79%), Gaps = 6/590 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 481 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 541 YLLSRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVK++++KG+LP+ILE
Sbjct: 599 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKASVRKGLLPQILEN 658
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 659 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 718
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 719 FGRQMIEKTKQLVETKYTLENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 778
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ + D+MD KG+E VRRDNC LV N
Sbjct: 779 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDRMDCKGLEAVRRDNCPLVAN 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 839 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 898
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +APN+GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 899 LAERMRKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 958
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ SCIGC+++I +
Sbjct: 959 AKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNSCIGCRSVIDHQ 1018
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCT 985
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CT
Sbjct: 1019 GAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICT 1068
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/334 (48%), Positives = 214/334 (64%), Gaps = 8/334 (2%)
Query: 74 KWARP-PLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGH 130
+W RP PL+ + ++FQQL+ID+ +G S E P S S I+R FGVT EG
Sbjct: 74 RWLRPTPLA--LDPSTEPLIFQQLEIDHYVGTSPPLPEGPPASRNSVPILRAFGVTDEGF 131
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC +HGF PYFY P G G + +S + L + R K V IE+ +
Sbjct: 132 SVCCHIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSGPAVLAIELCSR 191
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
S+ Y PFL+I +ALP ++A R +L++GI++ GLG SF YE+NV F +RFM
Sbjct: 192 ESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGTPSFAPYEANVDFEIRFM 251
Query: 249 IDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
+D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+LSF
Sbjct: 252 VDADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRVLSF 311
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E
Sbjct: 312 DIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEREE 371
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
D+L AW FI +DPDV+ GYNI FDLPYLI +
Sbjct: 372 DLLQAWATFILAMDPDVITGYNIQNFDLPYLISR 405
>gi|451998244|gb|EMD90709.1| hypothetical protein COCHEDRAFT_1179801 [Cochliobolus heterostrophus
C5]
Length = 1115
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/626 (60%), Positives = 485/626 (77%), Gaps = 12/626 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L NG++ +RRRLAVYCLKDAYLPQRLLDKLM + NY EMAR TGVP +
Sbjct: 484 QKEDVHHSMITELFNGDSNSRRRLAVYCLKDAYLPQRLLDKLMCLVNYTEMARATGVPFN 543
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++LSRGQ ++ +SQL RKA + LVIP++ G YEGATV+E + G+Y++P+ATLD
Sbjct: 544 YILSRGQQVRFISQLFRKALEHQLVIPDLPNQGDNGDQYEGATVIEPKRGYYKEPVATLD 603
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+T + + KL + E TP+G+ F + +KG+L EILE
Sbjct: 604 FASLYPSIMQAHNLCYTTWLDRQTVEKLKMKKDEDYIVTPNGDMFCTAKTRKGLLTEILE 663
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARK+AK +L DP +KAVL+GRQLA+K++ANSVYG TGAT G+LPC+ I+SS T
Sbjct: 664 ELLSARKKAKKELAVETDPFKKAVLNGRQLAMKVTANSVYGLTGATNGKLPCLAIASSTT 723
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMIE K VE K+ GY H+AEVIYGDTDSVMV+FG + AMKLG EAA Y
Sbjct: 724 SFGRQMIERAKAEVEAKYNIANGYSHDAEVIYGDTDSVMVKFGTTELAEAMKLGEEAAKY 783
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ F+KPIKLEFEKVY+PYLLI+KKRYAGLYWTNP K+DKMDTKGIETVRRDNC LV+
Sbjct: 784 VTSKFLKPIKLEFEKVYFPYLLINKKRYAGLYWTNPNKWDKMDTKGIETVRRDNCRLVQT 843
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD-----YEVK 813
++ L +L+D+D GA ++VK TI+DLL N++D+S LVITK LTK D Y K
Sbjct: 844 VIETSLRMLLIDQDPEGAQEFVKETIADLLQNKIDMSNLVITKALTKQEDKDGKGGYANK 903
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
AHVELAERM+KRDA +AP +GDRV YV+++AA GAK +E+SEDPIYVLENN+PIDT YY
Sbjct: 904 QAHVELAERMKKRDAGSAPALGDRVAYVMVRAATGAKNFEKSEDPIYVLENNLPIDTRYY 963
Query: 874 LENQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL 932
L+NQ++KPL RIFEPIL + + LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK
Sbjct: 964 LDNQLAKPLGRIFEPILGEKKAASLLTGEHTRSISVAAPTMGGLMKFAKKTQTCMGCKKP 1023
Query: 933 IS-----NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSR 987
++ +G +C +C+ R ELY KT+++V ELEV F RLWTQCQ CQGS+H +V+C SR
Sbjct: 1024 LTAAHEKDGAVCENCRPRIPELYTKTLTKVSELEVRFSRLWTQCQRCQGSVHCEVICASR 1083
Query: 988 DCPIFYRRKKAQKDMAEAKLQLDRWN 1013
DCPIFY R KA+KD+ +A +L R++
Sbjct: 1084 DCPIFYMRMKARKDVEDAGKELVRFD 1109
Score = 262 bits (670), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 212/371 (57%), Gaps = 40/371 (10%)
Query: 45 LDETL--LPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVI 102
+ETL + +D E+L + E+ Q +W RPPL + +++FQQ++ + +
Sbjct: 64 FEETLEKMTQDMETLQKENTEKDQ-------QWRRPPLPHEFSELTNNLVFQQIEAEEGV 116
Query: 103 GDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQI 162
G +++FGVT GHSV V GF+ YFY++ P D +
Sbjct: 117 ----------LHGGKTTVKLFGVTETGHSVLLHVTGFQHYFYVAAPVNFQQADCEPYKIF 166
Query: 163 LEGRMREA-NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD 221
LE +++ N++S V + ++M + +I+ +Q + P+LKI V P ++ R ++
Sbjct: 167 LEAECQKSFNQHSAV---IASVKMCMRENILRFQGNQKSPYLKITVTDPKLINRVRMMVQ 223
Query: 222 RG---------IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTA 270
+G + DG+ +T++ N+ + LRFMID + G W+E P K++
Sbjct: 224 KGNANYKRLWPAREDGI-----LTFD-NIAYVLRFMIDTKVTGMCWVEAPAAKWKMINAR 277
Query: 271 KTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVA 330
S CQ+E Y D+I+ EGE++K+AP RILSFDIECAGRKG FPE DPVIQ+A
Sbjct: 278 DRHSNCQIEGQVHYEDLIAHQAEGEWAKIAPLRILSFDIECAGRKGVFPEANVDPVIQIA 337
Query: 331 NLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNI 390
N+VT G+ +PF+RNV L + +PIV ++SF+ E D+L+ WRDF+ EVDPDV+IGYN
Sbjct: 338 NVVTKYGDDKPFVRNVFCLDTVSPIVATQILSFQDEGDMLMKWRDFLDEVDPDVIIGYNT 397
Query: 391 CKFDLPYLIEK 401
FD PYL+++
Sbjct: 398 SNFDFPYLLDR 408
>gi|451845686|gb|EMD58998.1| hypothetical protein COCSADRAFT_153806 [Cochliobolus sativus ND90Pr]
Length = 1115
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/626 (60%), Positives = 485/626 (77%), Gaps = 12/626 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L NG++ +RRRLAVYCLKDAYLPQRLLDKLM + NY EMAR TGVP +
Sbjct: 484 QKEDVHHSMITELFNGDSNSRRRLAVYCLKDAYLPQRLLDKLMCLVNYTEMARATGVPFN 543
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++LSRGQ ++ +SQL RKA + LVIP++ G YEGATV+E + G+Y++P+ATLD
Sbjct: 544 YILSRGQQVRFISQLFRKALEHQLVIPDLPNQGDTGDQYEGATVIEPKRGYYKEPVATLD 603
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+T + + KL + E TP+G+ F + +KG+L EILE
Sbjct: 604 FASLYPSIMQAHNLCYTTWLDRQTVEKLKMKKDEDYIVTPNGDMFCTAKTRKGLLTEILE 663
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARK+AK +L DP +KAVL+GRQLA+K++ANSVYG TGAT G+LPC+ I+SS T
Sbjct: 664 ELLSARKKAKKELAVETDPFKKAVLNGRQLAMKVTANSVYGLTGATNGKLPCLAIASSTT 723
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMIE K VE K+ GY H+AEVIYGDTDSVMV+FG + AMKLG EAA+Y
Sbjct: 724 SFGRQMIERAKAEVEAKYNIANGYSHDAEVIYGDTDSVMVKFGTTELAEAMKLGEEAANY 783
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ F+KPIKLEFEKVY+PYLLI+KKRYAGLYWTNP K+DKMDTKGIETVRRDNC LV+
Sbjct: 784 VTSKFLKPIKLEFEKVYFPYLLINKKRYAGLYWTNPNKWDKMDTKGIETVRRDNCRLVQT 843
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD-----YEVK 813
++ L +L+D+D GA ++VK TI+DLL N++D+S LVITK LTK D Y K
Sbjct: 844 VIETSLRMLLIDQDPEGAQEFVKETIADLLQNKIDMSNLVITKALTKQEDKDGKGGYANK 903
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
AHVELAERM+KRDA +AP +GDRV YV+++AA GAK +E+SEDPIYVLENN+PIDT YY
Sbjct: 904 QAHVELAERMKKRDAGSAPALGDRVAYVMVRAATGAKNFEKSEDPIYVLENNLPIDTRYY 963
Query: 874 LENQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK-- 930
L+NQ++KPL RIFEPIL + + LL+G+HTRSIS++ P+ G+MKFAK+ +C+GCK
Sbjct: 964 LDNQLAKPLGRIFEPILGEKKAASLLTGEHTRSISVAAPTMGGLMKFAKKTQTCMGCKKP 1023
Query: 931 ---ALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSR 987
A +G +C +C+ R ELY KT+++V ELEV F RLWTQCQ CQGS+H +V+C SR
Sbjct: 1024 LTAAYEKDGAVCENCRPRIPELYTKTLTKVSELEVRFSRLWTQCQRCQGSVHCEVICASR 1083
Query: 988 DCPIFYRRKKAQKDMAEAKLQLDRWN 1013
DCPIFY R KA+KD+ +A +L R++
Sbjct: 1084 DCPIFYMRMKARKDVEDAGKELVRFD 1109
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/366 (37%), Positives = 213/366 (58%), Gaps = 30/366 (8%)
Query: 45 LDETL--LPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVI 102
+ETL + +D E+L + E+ Q +W RPPL + +++FQQ++ + +
Sbjct: 64 FEETLEKMTQDMETLKKENTEKDQ-------QWGRPPLPHDFSEVTNNLVFQQIEAEEGV 116
Query: 103 GDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQI 162
G A +++FGVT GHSV V GF+ YFYI+ P D +
Sbjct: 117 ----------LHGGKATVKLFGVTETGHSVLLHVTGFQHYFYIAAPVNFQQADCEPYKIF 166
Query: 163 LEGRMREA-NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD 221
LE +++ N++S V + ++M + +I+ +Q + P+LKI V P ++ R ++
Sbjct: 167 LEAECQKSFNQHSAV---IASVKMCMRENILRFQGNQKSPYLKITVTDPKLINRVRTMVQ 223
Query: 222 RG----IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSY 275
+G +L G+ +T++ N+ + LRFMID + G W+E P K++ S
Sbjct: 224 KGNTNYKRLWPAGIDGILTFD-NIAYVLRFMIDTKVTGMCWVEAPAAKWKMINARDRHSN 282
Query: 276 CQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTL 335
CQ+E Y D+I+ EGE++K+AP RILSFDIECAGRKG FPE DPVIQ+AN+VT
Sbjct: 283 CQIEGQVHYEDLIAHSTEGEWAKIAPLRILSFDIECAGRKGVFPEANVDPVIQIANVVTK 342
Query: 336 QGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDL 395
G+ +PF+RNV L + +PIV ++SF+ E ++L+ WRDF+ EVDPDV+IGYN FD
Sbjct: 343 YGDDKPFVRNVFCLDTVSPIVATQILSFQDEGEMLMKWRDFLDEVDPDVIIGYNTSNFDF 402
Query: 396 PYLIEK 401
PYL+++
Sbjct: 403 PYLLDR 408
>gi|324120724|dbj|BAJ78753.1| DNA polymerase delta catalytic subunit [Zorotypus sp. 154-1]
Length = 999
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/617 (60%), Positives = 473/617 (76%), Gaps = 5/617 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH+II+DLQNGN +TRRRLAVYCLKDAYLP RLL+KLM I NY+EMARVTGV +S
Sbjct: 383 QKEDVHHNIITDLQNGNPQTRRRLAVYCLKDAYLPIRLLEKLMCIINYMEMARVTGVSLS 442
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRKA+++ ++P + G ++ +EGATV+E + G+Y PI TLD
Sbjct: 443 SLLTRGQQIKVVSQLLRKAREQGYLMPAYQGVGQDE-QFEGATVIEPKKGYYADPIVTLD 501
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ K L + KTP+ FV+ +++KG+LPEILE
Sbjct: 502 FSSLYPSIMMAHNLCYTTLLQGNAKDKFGLTEDQYLKTPTANFFVRKSVRKGLLPEILEN 561
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRAKADLK DP +K VLDGRQLALKISANSVYGFTGA VG+LPC+EISSSVT+
Sbjct: 562 LLAARKRAKADLKNETDPFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISSSVTA 621
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MIE TK+ VE + G+ H+A VIYGDTDSVM++FGV +E AM+LGR++A+++
Sbjct: 622 FGRTMIEQTKQEVEQHYNIENGFSHDACVIYGDTDSVMIKFGVKKLEEAMELGRQSAEFV 681
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FI PIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDN LV N+
Sbjct: 682 SSKFINPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNSPLVANM 741
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+DRD GAV Y K ISDLL NR+D+S LVITK LTK+ DY K AHVEL
Sbjct: 742 INTCLQKLLIDRDPNGAVDYAKEVISDLLCNRIDISQLVITKELTKS--DYAGKQAHVEL 799
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD TAP +GDRVPYV+ AAK AY ++EDPIYVLEN++PID YYLENQ+S
Sbjct: 800 AAKMKKRDPGTAPKLGDRVPYVLTAAAKNTPAYLKAEDPIYVLENSVPIDFDYYLENQLS 859
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT- 937
KPL+RIFEPIL + A LL GDHTR+ ++ T S + F ++ +C+GCK ++ + +
Sbjct: 860 KPLVRIFEPILGEKAESVLLRGDHTRTRAVVTSRVSALSAFTMKKETCLGCKTVLPDSSA 919
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
LC HC EA LY + + + LE + RLWT+CQ CQGSLH++VLC+SRDCPIFY RKK
Sbjct: 920 LCKHCMKNEAALYQQELLKFNSLEDKYCRLWTECQRCQGSLHEEVLCSSRDCPIFYMRKK 979
Query: 998 AQKDMAEAKLQLDRWNF 1014
Q D+ + R+
Sbjct: 980 VQLDLIAQDKAVQRFGL 996
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/317 (45%), Positives = 202/317 (63%), Gaps = 17/317 (5%)
Query: 111 PLSS------GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILE 164
PLSS G ++R++GVT G SVCC +HGF PYFY++ P+ D F L
Sbjct: 4 PLSSMPGSQIGPVPVMRMYGVTMTGLSVCCHIHGFSPYFYVTAPERFSNKDCQPFKTSLN 63
Query: 165 GRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDR 222
+ R+++ + + + +E+V K+S+ Y K + F+KI VALP ++A + +L++
Sbjct: 64 RAVLADLRSNREEIKEAILMVEIVHKKSLFGYSD-KDRLFIKITVALPRLIAPSKRLLEK 122
Query: 223 GIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK------TLSYC 276
D G S+ ++ESN+ F +RFM+D N++G W+E+P K++ +K S C
Sbjct: 123 ENIYDACGPHSYQSFESNIDFDIRFMVDTNVLGCTWVELPPKKWKIRSKENPNLPITSRC 182
Query: 277 QLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQ 336
Q+E D Y D IS P+ E+SK+APFRILSFDIECAGRKG FPEP HDP+IQ+AN+V Q
Sbjct: 183 QIEADICYEDFISYQPDNEWSKVAPFRILSFDIECAGRKGIFPEPEHDPIIQIANMVIRQ 242
Query: 337 GEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLP 396
G+ +PFIRNV TL +CAPIVG V+SF TE+ +L AW F+REVDPD+ GYNI FD P
Sbjct: 243 GDNEPFIRNVFTLNTCAPIVGCQVLSFNTEQKMLEAWSSFVREVDPDIFTGYNINNFDFP 302
Query: 397 YLIEKEDVHHSIISDLQ 413
YLI + H + D +
Sbjct: 303 YLINR--AKHLKVKDFE 317
>gi|322801992|gb|EFZ22529.1| hypothetical protein SINV_03834 [Solenopsis invicta]
Length = 1072
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/609 (61%), Positives = 474/609 (77%), Gaps = 8/609 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H I+ LQNGNA+TRRRLAVYCLKDAYLP RLLDKLM I Y+EMARVTGV IS
Sbjct: 453 QKEDVQHKDITGLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSIS 512
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK K+K+ ++P V Q +EGATV+E + G+Y PIATLD
Sbjct: 513 SLLTRGQQIKVVSQLLRKTKEKDYLMP-VHQGHGTDEQFEGATVIEPKRGYYNDPIATLD 571
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSI+MA+NLCY+TL+T ++LN+ + + TPS F+KS ++KGILPEILE
Sbjct: 572 FSSLYPSIIMAHNLCYTTLLTVAKKKELNIQEDQITTTPSNSLFIKSTIRKGILPEILEN 631
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AKA+LK+ DPL++ VLDGRQ ALK+SANSVYGFTGA +G+LPC+EIS+SVT+
Sbjct: 632 LLSARKKAKAELKQETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLEISASVTA 691
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE+ F GY+++A VIYGDTDSVMV+FGV +E AM LG+EAADY+
Sbjct: 692 YGRTMIERTKQEVENHFRIENGYKNDAMVIYGDTDSVMVKFGVKAIEDAMVLGKEAADYV 751
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ FIKPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV N+
Sbjct: 752 TSKFIKPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDKMDCKGLETVRRDNCPLVANM 811
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL +L++R+ A+ Y K ISDLL NR+DLS LVITK LTKT DY K AHVEL
Sbjct: 812 MNTCLQILLIERNPHSAIDYAKQVISDLLCNRIDLSQLVITKELTKT--DYAAKQAHVEL 869
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRDA AP +GDRV YV AAKG AY+++EDP+Y L+N+IPIDT+YYLENQ++
Sbjct: 870 AAKMKKRDAGNAPKLGDRVAYVFTSAAKGTPAYQKAEDPVYALQNSIPIDTNYYLENQLA 929
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----S 934
KPL+RIFEPIL + A LL GDHTR+ I+T + F +++ +C+GCKA++
Sbjct: 930 KPLVRIFEPILGEKAESLLLKGDHTRTRCIATSQVGALAAFTRKKETCLGCKAVLPSDRE 989
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+ +C HC+ +EAEL+ + +LE F RLW +CQ CQGSLHQ+V+C++RDCPIFY
Sbjct: 990 DKAVCKHCEPKEAELFHNELQGQHKLEEKFSRLWAECQRCQGSLHQEVICSNRDCPIFYM 1049
Query: 995 RKKAQKDMA 1003
R K++ DMA
Sbjct: 1050 RVKSRIDMA 1058
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 213/340 (62%), Gaps = 16/340 (4%)
Query: 73 AKWAR---PPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREG 129
AKW R PPL+ Q ++ FQQ++ID+ IG + G I+R++GVT +G
Sbjct: 43 AKWNRAPPPPLNP----QVDTLAFQQIEIDHYIGKPLPGMPGSKIGPVPIMRMYGVTEQG 98
Query: 130 HSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS--KVPQFVRHIEMVQ 187
+SVCC VHGF PY ++S P + F + L +++ R++ + + +E+V
Sbjct: 99 NSVCCHVHGFCPYLFVSAPSNFTNNHCKPFKEALNQVVKKDMRSNPDNIQDAILAVELVY 158
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRF 247
K+S+ Y PFLKI VA+P ++A C+ +L++ + + + +ESN+ F +RF
Sbjct: 159 KQSMYGYGGNDKLPFLKITVAVPKLIAPCKRLLEQN-DVYTVFNHHYRAFESNIDFDIRF 217
Query: 248 MIDCNIVGGNWIEVPVGKYR------KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAP 301
M+D ++VG +WIE+P GK++ + + CQLE D + I+ PEGE+SK+AP
Sbjct: 218 MVDTSVVGCSWIELPPGKWKLRGQHGHMLELTTRCQLEVDIAWDSFIAHAPEGEWSKVAP 277
Query: 302 FRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVM 361
FRILSFDIECAGR+G FPE HDPVIQ+AN+V QGE +PF+RN+ TL +CAPIVG V+
Sbjct: 278 FRILSFDIECAGREGIFPEAKHDPVIQIANMVIRQGEPEPFLRNIFTLDTCAPIVGSQVL 337
Query: 362 SFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
SF TE +L W DF+R+ DPD+ GYNI FD PYLI +
Sbjct: 338 SFNTESLMLEKWADFVRQSDPDIFTGYNINNFDFPYLINR 377
>gi|324120744|dbj|BAJ78763.1| DNA polymerase delta catalytic subunit [Metylophorus sp. E-43]
Length = 1036
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/618 (61%), Positives = 462/618 (74%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIIS+LQ G TRRRLAVYCLKDAYLP RLLDKLM I NY+EMARVTGV +
Sbjct: 417 QKEDVHHSIISELQQGGPHTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVALP 476
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKVLSQLLRK ++K ++P G + YEGATV+E R G+Y PIATLD
Sbjct: 477 SLLTRGQQIKVLSQLLRKTREKGFLMPAYHGTGGDD-QYEGATVIEPRKGYYADPIATLD 535
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ KL+L + KTP+ FV +++KG+LPEILE
Sbjct: 536 FSSLYPSIMMAHNLCYTTLLQGGVKEKLDLSTDQYTKTPAQNYFVHKSVRKGLLPEILEN 595
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLK D L K VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 596 LLDARKKAKADLKNETDELRKKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 655
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE T+ VE KF GY+H++ VIYGDTDSVMV+FG + M LGREAAD++
Sbjct: 656 YGRSMIEQTRLEVEQKFNIENGYKHDSVVIYGDTDSVMVRFGNKDLAECMDLGREAADHV 715
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F+ PIKLEFEKVYYPYLLI+KKRYAGLYWT P+K+DK+D KG+ETVRRDN LV N+
Sbjct: 716 SAKFLSPIKLEFEKVYYPYLLINKKRYAGLYWTRPDKYDKLDCKGLETVRRDNAPLVANM 775
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL KIL++RD GAV Y K I+DLL N++D+S LVITK L K+ DY K AHVEL
Sbjct: 776 MNSCLQKILINRDPDGAVAYAKKVIADLLCNKVDISQLVITKELAKS--DYAAKQAHVEL 833
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD AP +GDRVPYVI A KG AY+++EDPIYVLEN+IPID YYLENQ++
Sbjct: 834 AAKMKKRDPGNAPKLGDRVPYVICCATKGTPAYQKAEDPIYVLENSIPIDFSYYLENQLA 893
Query: 880 KPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----S 934
KPLLRIFEPIL + A LL GDHTR+ ++ T + F K++ +C+GCKA++
Sbjct: 894 KPLLRIFEPILGDKAESVLLRGDHTRTRAVVTSRVGALAAFTKKRETCLGCKAVLPTNAE 953
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+ LC HCK EA LY + + ++LE F RLWTQCQ CQ SLH++V+CTSRDCPIFY
Sbjct: 954 DSALCVHCKPNEAALYLAQLDKFRQLESQFSRLWTQCQTCQSSLHEEVICTSRDCPIFYM 1013
Query: 995 RKKAQKDMAEAKLQLDRW 1012
RKK Q D+ + R+
Sbjct: 1014 RKKVQLDLQNHDKVMQRF 1031
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 218/337 (64%), Gaps = 10/337 (2%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+W+RP ++ +++FQQ++ID+ +G + + + +G +I+R++GVT EG+SVC
Sbjct: 6 RWSRPKPPHLDPAK-HNLVFQQIEIDHYVGRAMAGMPGVQTGPVSIMRMYGVTMEGNSVC 64
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C VHGF PYF++S P G F L + R+++ + + V +EMV ++++
Sbjct: 65 CHVHGFVPYFFVSAPSGFDEKHCRPFKDALNKVVMADLRSNREGMQEAVVAVEMVWRQNV 124
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y+ + FL+I V LP ++A+C+ +L++ I LG + ++ESN+ +RFM+D
Sbjct: 125 YGYRGEDKDLFLRITVTLPRLIAACKRLLEKEIVYSQLGPHHYTSFESNIDVDIRFMVDT 184
Query: 252 NIVGGNWIEVPVGKYRKTAKT-------LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
N+VG +W+E+P GK+R K S CQ+E D + +S PEGE+SK+APFRI
Sbjct: 185 NVVGCSWVELPSGKWRIRMKDNPMGLPLTSRCQIECDVAWDQFMSHPPEGEWSKVAPFRI 244
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP HDPVIQ+AN+V QG +PFIRN+ TL +CAPI+G V+ F+
Sbjct: 245 LSFDIECAGRKGVFPEPNHDPVIQIANMVIKQGSAEPFIRNIFTLDTCAPIIGSQVLCFD 304
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E ++L W F+REVDPD+ GYNI FD PYLI +
Sbjct: 305 KETELLKKWAAFVREVDPDIFTGYNINNFDFPYLINR 341
>gi|148690785|gb|EDL22732.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_d
[Mus musculus]
Length = 1101
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/590 (63%), Positives = 466/590 (78%), Gaps = 6/590 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 483 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 543 YLLTRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVKS+++KG+LP+ILE
Sbjct: 601 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILEN 660
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 661 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 720
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 721 FGRQMIEKTKQLVESKYTVENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 780
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ + DKMD KG+E VRRDNC LV N
Sbjct: 781 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDKMDCKGLEAVRRDNCPLVAN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 841 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 901 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 960
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ CIGC+++I +
Sbjct: 961 AKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRSVIDHQ 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCT 985
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CT
Sbjct: 1021 GAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICT 1070
Score = 325 bits (832), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/337 (47%), Positives = 214/337 (63%), Gaps = 14/337 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSG------SAAIIRIFGVTR 127
+W RP L + S + ++FQQL+ID+ +G + PL G S I+R FGVT
Sbjct: 76 RWRRPTLRALDPS-TEPLIFQQLEIDHYVGSAP----PLPEGPLPSRNSVPILRAFGVTD 130
Query: 128 EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEM 185
EG SVCC + GF PYFY P G G + +S Q L + R K V IE+
Sbjct: 131 EGFSVCCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIEL 190
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFAL 245
+ S+ Y PFL+I +ALP ++A R +L++G+++ GLG SF YE+NV F +
Sbjct: 191 CSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEI 250
Query: 246 RFMIDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
RFM+D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+
Sbjct: 251 RFMVDADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRV 310
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E
Sbjct: 311 LSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYE 370
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW DFI +DPDV+ GYNI FDLPYLI +
Sbjct: 371 REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISR 407
>gi|367024855|ref|XP_003661712.1| hypothetical protein MYCTH_2301456 [Myceliophthora thermophila ATCC
42464]
gi|347008980|gb|AEO56467.1| hypothetical protein MYCTH_2301456 [Myceliophthora thermophila ATCC
42464]
Length = 1081
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/594 (62%), Positives = 467/594 (78%), Gaps = 11/594 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I++L G E+RRRLA+YCLKDAYLPQRL++KL + NY EMARVTGVP +
Sbjct: 481 QKEDVHHSMITELFEGTPESRRRLALYCLKDAYLPQRLMEKLSCLENYTEMARVTGVPFN 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ +K LSQL RKA ++ LVIPN++ SE+ YEGATV+E +Y+ PIATLD
Sbjct: 541 FLLARGQQVKFLSQLYRKALEQKLVIPNLRSESSEE-QYEGATVIEPIRNYYDVPIATLD 599
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM A+NLCY+TL+ +D K NL E TPSG+ FV + +KG+L +ILE
Sbjct: 600 FASLYPSIMQAHNLCYTTLIKKKDVEKWNLKKDEDYIVTPSGDMFVTTKQRKGLLAQILE 659
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELLAARK+AK +L DP +KAVL+GRQLALKISANSVYG TGAT G+LPC+EI+SS T
Sbjct: 660 ELLAARKQAKRELAAETDPFKKAVLNGRQLALKISANSVYGLTGATNGKLPCLEIASSTT 719
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+GRQMIE TK+ VE ++T GY H+A+VIYGDTDSVMV+FG + AMKLG +A+ Y
Sbjct: 720 GFGRQMIEKTKQEVEKRYTIANGYSHDAQVIYGDTDSVMVKFGTTDLAEAMKLGEDASQY 779
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWT P+++DKMDTKGIETVRRDNCLL +
Sbjct: 780 VSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTRPDRYDKMDTKGIETVRRDNCLLAQT 839
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+DRD+ GA +YVK TISDLL N++D+S LVITK LTK +DY K AHVE
Sbjct: 840 VIEKVLRMILIDRDVSGAQEYVKDTISDLLQNKIDMSKLVITKALTK--EDYAAKQAHVE 897
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRD +AP +GDRV YV++K A G+K +ERSEDP+YVLE+N+PIDT YYL+NQ+
Sbjct: 898 LAQRMKKRDPGSAPGLGDRVAYVMVKGAAGSKNFERSEDPMYVLEHNVPIDTKYYLDNQL 957
Query: 879 SKPLLRIFEPILKNAS--KELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--- 933
+KPL RIFEPIL + S K LLSGDHTR+IS++ P+ G+MKFAK+ +C+GCK +
Sbjct: 958 AKPLTRIFEPILGSESKTKSLLSGDHTRTISVAAPTVGGLMKFAKKTQTCMGCKKPLTGK 1017
Query: 934 --SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCT 985
S G +C+ R ELY KT+ +V +LEV F RLWTQCQ CQGS+H +V+C+
Sbjct: 1018 EESQGAVCADDAPRIGELYKKTLDKVSDLEVRFSRLWTQCQRCQGSMHCEVICS 1071
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 197/341 (57%), Gaps = 21/341 (6%)
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
+++ A + W RPP+ SGY + S+ FQ ++ + +G A I++FG
Sbjct: 82 KENNAEKDQIWDRPPVPSGYDPEKDSLCFQAIEAEE----------GTIAGGQATIKLFG 131
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT G+SV V F+ Y Y++ P +D F LE ++ + R + +
Sbjct: 132 VTENGNSVLLHVRDFKHYLYVAAPVSFTAEDCPKFQAYLESQLALSQRA------IHSVT 185
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS----FMTYESN 240
+ + +I +Q P+LKI V P ++ R ++RG KS MT++ N
Sbjct: 186 LTMRENIYGFQGNVQSPYLKITVTDPKLIGKVRSTIERGDANYKKMWKSSDGTIMTFD-N 244
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
+ + LRFM+DC+I G W+E P GKY S CQ+E Y D+IS P GE+SKMA
Sbjct: 245 IQYLLRFMVDCSIAGMAWVEAPAGKYSLVHDKQSNCQIEAQISYRDLISHKPVGEWSKMA 304
Query: 301 PFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDV 360
P R+LSFDIECAGRKG FPE HD VIQ+AN+VT GEK+PF+RNV L + +PIV +
Sbjct: 305 PLRVLSFDIECAGRKGIFPEANHDAVIQIANIVTKYGEKKPFVRNVFCLDTTSPIVATQI 364
Query: 361 MSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+SF+ E D+L AWRDF+ +VDPD++ GYNI FD PYL+++
Sbjct: 365 LSFDKEEDMLSAWRDFLVQVDPDIITGYNIANFDFPYLLDR 405
>gi|66809121|ref|XP_638283.1| DNA polymerase delta catalytic subunit [Dictyostelium discoideum AX4]
gi|74853854|sp|Q54N97.1|DPOD1_DICDI RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|60466714|gb|EAL64765.1| DNA polymerase delta catalytic subunit [Dictyostelium discoideum AX4]
Length = 1104
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/618 (59%), Positives = 475/618 (76%), Gaps = 10/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH SIISDLQNG + RRRLAVYC+KDA LP RLLDKLM + NY EMARVTGVP+S
Sbjct: 490 QKEDVHFSIISDLQNGTDDDRRRLAVYCIKDAVLPMRLLDKLMILINYTEMARVTGVPLS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RG+ IKVLSQL RKA +N +IP K G + ++GA V+E GFY+ PIATLD
Sbjct: 550 YLLGRGEGIKVLSQLYRKAMVENFLIPTYKVTGKGE-KFQGAIVIEPTPGFYDTPIATLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F SLYPSIMMA+NLCYSTL++ E+A+KL PPE TP G+ F+KS+ +KG+LP ILEE
Sbjct: 609 FTSLYPSIMMAHNLCYSTLLSAEEAKKL--PPEIYTTTPFGDHFIKSDTKKGLLPRILEE 666
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AK +LK KDP ++AVLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVTS
Sbjct: 667 LLSARKKAKDELKNEKDPFKRAVLDGRQLALKISANSVYGFTGARVGKLPCLEISRSVTS 726
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+M++ TKK+VE+++T GY+H+A +IYGDTDSVMV+FGV TV AM++GR+AA ++
Sbjct: 727 FGREMLDKTKKIVEERYTIANGYKHDAVIIYGDTDSVMVKFGVKTVAEAMEMGRDAAKFV 786
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ TFI+PI L+FEKVYYPYLL++KK+YAGLYWT P+ D+MD KG+E VRRD CLLV+N+
Sbjct: 787 TTTFIRPINLDFEKVYYPYLLMAKKKYAGLYWTKPDIHDRMDVKGLEMVRRDTCLLVRNV 846
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
V+ L KIL+++D+ A +Y KS ISDLL NR+DLS+LVITK L+KT Y+ K H EL
Sbjct: 847 VSTILKKILIEKDLKSAEEYTKSVISDLLQNRLDLSMLVITKALSKT--QYKGKVIHNEL 904
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +MR RD ATAPN+GDRVPYV+I+ +KGA YE++EDP+Y LE+NI +D YYL+ Q+
Sbjct: 905 ARKMRARDPATAPNLGDRVPYVVIQGSKGAPIYEKAEDPLYALEHNILLDCQYYLDKQLK 964
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPS--NSGIMKFAKRQLSCIGCKALISN-- 935
PL+RIF+PI+ N + G+HTR+I+ ST S N G K++ C+ C +++
Sbjct: 965 APLIRIFKPIMSNPDL-IFHGEHTRTIAQSTLSDNNKGFFGTLKKKKVCMNCPKELTDTE 1023
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
T C +C+ +EA LY ++ +V LE F WTQCQ C GSLHQ VLC++RDCPIFY R
Sbjct: 1024 STTCINCQHKEASLYQTSLEKVTSLETKFSEAWTQCQRCSGSLHQPVLCSNRDCPIFYMR 1083
Query: 996 KKAQKDMAEAKLQLDRWN 1013
K Q D+ EAK L+R+N
Sbjct: 1084 TKVQLDLIEAKKTLNRFN 1101
Score = 293 bits (749), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 151/348 (43%), Positives = 209/348 (60%), Gaps = 11/348 (3%)
Query: 61 DIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYV-IGDSNRELLPLSSGSAAI 119
DI+ + D + +L W+R P+ V + ++FQQL++DY I + + G
Sbjct: 71 DIDIQDDGSQQLFLWSRKPVQD-LVPHKKPLIFQQLEVDYTEIKEPVPGMPGPKVGPLPA 129
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK---V 176
IR+FGVT+EG+SV CKVHGF PYF+ISCP G D L M+ ++ S +
Sbjct: 130 IRLFGVTKEGNSVLCKVHGFLPYFFISCPPGFTEADCKSLKHDLNESMKMSSNQSNEKDI 189
Query: 177 PQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG---IQLDGLGMKS 233
V I++ +K+SIM Y F++I + LP V CR I + G + G +
Sbjct: 190 ENIVVSIDIEKKKSIMGYNPNPLSDFIRITLILPKFVTRCREIFESGRHHFTIPGQPFRQ 249
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPE 293
+ TYESN+LFALRF+ID I G +WIE+P Y+ + +S CQ+E D IIS +
Sbjct: 250 YQTYESNILFALRFLIDKGITGCSWIELPANTYKLSETPVSTCQIEVDTSLETIISLSDD 309
Query: 294 GEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCA 353
AP+RILSFDIECAGRKG FPEP DPVIQ++N+V G+ +PFI+N+ TLK C+
Sbjct: 310 ---DSPAPYRILSFDIECAGRKGVFPEPEKDPVIQISNIVKNNGDAEPFIKNIFTLKGCS 366
Query: 354 PIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
IVG V+ + E D+L WR F+ +VDPDV+IGYNI FD+PYLI +
Sbjct: 367 SIVGAHVIPHKREEDLLREWRKFVIKVDPDVIIGYNIVNFDIPYLISR 414
>gi|358335780|dbj|GAA54399.1| DNA polymerase delta subunit 1 [Clonorchis sinensis]
Length = 1128
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/625 (60%), Positives = 478/625 (76%), Gaps = 23/625 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H++ISDLQNG+A TRRRLAVYCLKDAYLP RLLDKLM + N +EMARVTGVP++
Sbjct: 494 QKEDVEHNVISDLQNGDAHTRRRLAVYCLKDAYLPLRLLDKLMCVVNNIEMARVTGVPLT 553
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG-TYEGATVLEARAGFYEKPIATL 518
+L++RGQ +KV+SQLLRKA++ + V+P + S+QG Y GATVLE GFY +PIATL
Sbjct: 554 YLITRGQQVKVISQLLRKAREHDFVLPTYQ---SQQGDEYVGATVLEPIKGFYNEPIATL 610
Query: 519 DFASLYPSIMMAYNLCYSTLV----TPEDA--------RKLNLPPECVNKTPSGETFVKS 566
DFASLYPSIMMAYNLCY+TL+ TP A + NL P+ TP+G FVKS
Sbjct: 611 DFASLYPSIMMAYNLCYTTLMQVSNTPGGAAAGLNAFVERYNLSPDDYICTPTGAYFVKS 670
Query: 567 NLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG 626
++ +G+LPEILE+LL+ARK+AKADL + DPL K VLDGRQLALKISANSVYGFTGA VG
Sbjct: 671 SVHRGLLPEILEQLLSARKKAKADLAKETDPLRKRVLDGRQLALKISANSVYGFTGAQVG 730
Query: 627 QLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVE 686
+LPC+EIS+SVTS+GR+MI+ TK+ VE KFT GY HNA VIYGDTDSVM +FGV TV
Sbjct: 731 KLPCLEISASVTSFGRRMIDQTKEHVEGKFTRANGYAHNAAVIYGDTDSVMCKFGVSTVA 790
Query: 687 AAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIE 746
AM+LGR+AA+ IS F PI+LEFEKVY+PYLLI+KKRYAGLY+T P+K DKMD KGIE
Sbjct: 791 EAMELGRKAAEIISAEFPNPIRLEFEKVYFPYLLINKKRYAGLYFTKPDKHDKMDCKGIE 850
Query: 747 TVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKT 806
TVRRDN LV NL+ CL +IL+ RD A+ + + ISDLL NR+D+S LVI+K LTKT
Sbjct: 851 TVRRDNSPLVANLIQACLERILIHRDPNSAITFAQGVISDLLCNRIDISQLVISKELTKT 910
Query: 807 GDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIK-AAKGAKAYERSEDPIYVLENN 865
++Y K AHVELA +MRKRDA +AP++GDRVPYVI K + Y ++EDP+YVLE+N
Sbjct: 911 DEEYAGKQAHVELAAKMRKRDAGSAPHLGDRVPYVITAVGGKNSATYTKAEDPLYVLEHN 970
Query: 866 IPIDTHYYLENQISKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQ 923
+PIDT YYLENQ++ PLLRIFEPIL A + LL+G+HTR ++ + F +++
Sbjct: 971 VPIDTKYYLENQLANPLLRIFEPILGEAKAKSVLLNGEHTRVKAVVHSKVGQLSAFTQKR 1030
Query: 924 LSCIGCKALISN----GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLH 979
+C+GC+ L+ N LC +C+ R +E+Y K ++Q+ +E F RLWT+CQ CQGS+H
Sbjct: 1031 ATCVGCRTLLPNDKAEAALCKYCEPRASEIYQKEIAQLNVMEGRFARLWTECQRCQGSIH 1090
Query: 980 QDVLCTSRDCPIFYRRKKAQKDMAE 1004
++V+CTSRDCPIFY R K++KD E
Sbjct: 1091 EEVICTSRDCPIFYMRMKSRKDTEE 1115
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 231/419 (55%), Gaps = 31/419 (7%)
Query: 15 TPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFA----S 70
TPK + +Q+++ ++ + F E +L ++ E+ + +++ A S
Sbjct: 3 TPKRPYAVVKQSSSSVKRGRGEDHPEPSKFEQELMLLDELEAEDVALVDESATLAVVDVS 62
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGH 130
+ W+RP S + SI+FQQ D+ + GD + S I+R+FG+T++G+
Sbjct: 63 PSSLWSRPAPPSLDPGR-DSIIFQQFDVSHYKGDRLAGMPGASESPVPIVRLFGITQKGN 121
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK---VPQFVRHIEMVQ 187
SVC VHGF PYFY+ P+ + F + L + + R + + V ++ Q
Sbjct: 122 SVCAHVHGFVPYFYVPAPKDFSVSHLGTFREALNAALLKDARTKEFDGLKHLVLMVDCEQ 181
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRF 247
K++I Y ++ PFLK+ VALP ++++ + IL+ G +S+ +E+N+ F +RF
Sbjct: 182 KQNIYGYHGKRKLPFLKVTVALPRIISAAKRILENGFAFGEYSFQSYPAFEANIDFEIRF 241
Query: 248 MIDCNIVGGNWIEVPVGKYR-------------------KTAKTL----SYCQLEFDCLY 284
M+D I G W+E P G YR KT L S CQ+EFD +
Sbjct: 242 MVDTEITGCCWVEAPPGSYRLRDSSEANDHKVWGSSSIQKTHPNLAPAQSRCQIEFDIAW 301
Query: 285 SDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIR 344
+I+ P+GE+S +AP RILS DIECAGRKG FP P DPVIQ+A +V GE PFIR
Sbjct: 302 DALIAHQPDGEWSSIAPLRILSVDIECAGRKGIFPVPDQDPVIQIATMVCNYGESTPFIR 361
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
NV TL +CAPIVG V+ +TE+++L W F+R+VDPD++ GYN FDLPYLI + +
Sbjct: 362 NVFTLDTCAPIVGSQVVCHKTEKELLEHWAMFVRQVDPDIITGYNTQNFDLPYLINRAN 420
>gi|307203676|gb|EFN82660.1| DNA polymerase delta catalytic subunit [Harpegnathos saltator]
Length = 1054
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/618 (60%), Positives = 479/618 (77%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H I+ LQNGNA+TRRRLAVYCLKDAYLP RLLDKLM I Y+EMARVTGV IS
Sbjct: 435 QKEDVQHKDITGLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSIS 494
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK ++K+ ++P V Q +EG TV+E + G+Y PIATLD
Sbjct: 495 SLLTRGQQIKVVSQLLRKTREKDYLMP-VHQGHGTDEQFEGGTVIEPKRGYYNDPIATLD 553
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSI+MA+NLCY+TL+T ++LN+P + VN TPS FVKS+++KGILPEILE
Sbjct: 554 FSSLYPSIIMAHNLCYTTLLTIAKKKELNIPEDDVNTTPSNSLFVKSSVRKGILPEILEN 613
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AK +LK+ DPL++ VLDGRQ ALK+SANSVYGFTGA +G+LPC+EIS+ VT+
Sbjct: 614 LLAARKKAKVELKQETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLEISAGVTA 673
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE+ F GY+++A VIYGDTDSVMV+FGV ++ AM+LG+EAADY+
Sbjct: 674 YGRTMIERTKQEVEEHFRIENGYKNDAIVIYGDTDSVMVKFGVESIVEAMELGKEAADYV 733
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F+KPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDNC LV N+
Sbjct: 734 SSKFVKPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDKMDCKGLETVRRDNCPLVANM 793
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL +L++R+ A+ Y K ISDLL NR+DLS LVITK LTKT DY K AHVEL
Sbjct: 794 MNTCLQILLIERNPHAALDYAKQVISDLLCNRIDLSQLVITKELTKT--DYAAKQAHVEL 851
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRD AP +GDRV YV I AAKGA AY+++EDP+Y L+N+IPIDT+YYLENQ++
Sbjct: 852 ATKMKKRDPGNAPKLGDRVAYVFISAAKGAPAYQKAEDPVYALQNSIPIDTNYYLENQLA 911
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----S 934
KPL+RIFEPIL + A LL GDHTR+ I+T + F +++ +C+GCKA++
Sbjct: 912 KPLVRIFEPILGEKAESLLLKGDHTRTKCIATSQVGALAAFTRKKETCLGCKAVLPPDRE 971
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+ +C HC+ +E+EL+ + +LE F RLW +CQ CQGSLHQ+V+C++ DCPIFY
Sbjct: 972 DKAVCKHCEPQESELFHNELQAQHKLEEKFSRLWAECQRCQGSLHQEVICSNCDCPIFYM 1031
Query: 995 RKKAQKDMAEAKLQLDRW 1012
R K++ DMA ++ R+
Sbjct: 1032 RVKSRMDMAAKVKRIQRF 1049
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 226/376 (60%), Gaps = 29/376 (7%)
Query: 37 EFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWAR---PPLSSGYVSQCQSIMF 93
+++D+D F +E L+ E E QD + AKW+R PPL+ Q ++ F
Sbjct: 2 DYIDDD-FQNEILIGEGPE----------QD--NTFAKWSRAPAPPLNP----QIDTLAF 44
Query: 94 QQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGP 153
QQ++ID+ IG + G I+R+FG+T +G+SVCC VHGF PY ++ P
Sbjct: 45 QQIEIDHYIGKPLPGMPGSKLGPVPIMRMFGITEQGNSVCCHVHGFCPYLFVLAPSKFTN 104
Query: 154 DDISHFHQILEGRMREANRNS--KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPT 211
F + L +++ +++ + + + +E+V K+S+ Y ++ PFLKI VA+P
Sbjct: 105 YHCKPFKEALNQAVKKDMKSNPNNIQEAILAVELVYKQSMYGYTGEEKLPFLKITVAVPR 164
Query: 212 MVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPV------GK 265
++A C+ +L++ + +ESN+ F +RFM+D ++VG WIE+ G+
Sbjct: 165 LIAPCKRLLEQDTVYTVFN-HHYKAFESNIDFDIRFMVDTSVVGCCWIELKPKTWKLRGQ 223
Query: 266 YRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP 325
+ + + CQLE D + I+ PEGE+SK+APFRILSFDIECAGR+G FPE HDP
Sbjct: 224 HGHVLELTTRCQLEIDVAWDAFIAHAPEGEWSKIAPFRILSFDIECAGREGIFPEAKHDP 283
Query: 326 VIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVM 385
VIQ+AN+V QGE +PF+RN+ T +CAPIVG V+SFE E +L W DF+R++DPD+
Sbjct: 284 VIQIANMVIKQGESEPFLRNIFTFGTCAPIVGCQVLSFEKESLMLEKWADFVRQLDPDIF 343
Query: 386 IGYNICKFDLPYLIEK 401
GYNI FD PYLI +
Sbjct: 344 TGYNINNFDFPYLINR 359
>gi|157875046|ref|XP_001685930.1| putative DNA polymerase delta catalytic subunit [Leishmania major
strain Friedlin]
gi|68129003|emb|CAJ06437.1| putative DNA polymerase delta catalytic subunit [Leishmania major
strain Friedlin]
Length = 1032
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/623 (60%), Positives = 480/623 (77%), Gaps = 20/623 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQ+G+ ETRRRLAVYCLKDA+LP +LLD+LM I N VEMARVTGVP+
Sbjct: 414 QKEDVHHSIISDLQHGDEETRRRLAVYCLKDAFLPVKLLDRLMCIVNNVEMARVTGVPVG 473
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ IKV S LLRKA++K LV+P V+ G YEGATV++ GFY P+ATLD
Sbjct: 474 WLLERGQQIKVFSMLLRKAQKKKLVVPTVEYTGGSDRGYEGATVIDPIKGFYNCPVATLD 533
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSI++A+NLCYSTLV P DAR P + ++++P+ + FVK + GILPE+L++
Sbjct: 534 FASLYPSIIIAHNLCYSTLVRPADARLY--PEDALDRSPTSDVFVKKEVFPGILPEVLQD 591
Query: 580 LLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LLAARK A+A +K+ + LE VL+GRQLALK+SANSVYGFTGA VG+LPC+EIS+SVT
Sbjct: 592 LLAARKHARAMMKDVPMNSLEYKVLNGRQLALKVSANSVYGFTGAQVGKLPCLEISASVT 651
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGV-------PTVEAAMKL 691
+YGRQMI+ TK LVED + A V+YGDTDSVMV+ ++ AM
Sbjct: 652 AYGRQMIDRTKNLVEDLYP-------GARVLYGDTDSVMVKCVTDEKASDKERLQEAMDF 704
Query: 692 GREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRD 751
G EAA+ +S F+KPIKLEFEKVY+PYLL++KKRYAGL WTN ++FDK+D KGIETVRRD
Sbjct: 705 GIEAAEKVSSNFLKPIKLEFEKVYFPYLLMNKKRYAGLLWTNTDRFDKLDAKGIETVRRD 764
Query: 752 NCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE 811
NC LV +V+ L++IL+ R + AV++VK TISDLL+NR+D+S LVITK +K D+Y
Sbjct: 765 NCPLVARMVSGVLNRILIHRSVESAVEFVKGTISDLLLNRLDISNLVITKAFSKAEDEYA 824
Query: 812 VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTH 871
AH+ L ERMR+RD A+AP +GDRV YVIIKAAKGAKAYERSEDPIYVL+NNIPIDT
Sbjct: 825 GAQAHIALVERMRQRDPASAPTIGDRVAYVIIKAAKGAKAYERSEDPIYVLDNNIPIDTQ 884
Query: 872 YYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GIMKFAKRQLSCIGC 929
YYLE+Q++ P+LR+FE +L + S L+ GDHTR I+IS PS + G+M+F K QL CI C
Sbjct: 885 YYLEHQLAPPILRVFEGVLDDPSV-LIKGDHTRHIAISAPSKNAGGLMRFVKVQLQCISC 943
Query: 930 KALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
+A+I G LC +C+ + E+Y K V++ E ++ ++WTQCQ+CQGSL+Q+V+C+SRDC
Sbjct: 944 RAVIKAGALCDNCQDKAPEVYGKIVAKRNHYEAIYSQVWTQCQQCQGSLNQEVICSSRDC 1003
Query: 990 PIFYRRKKAQKDMAEAKLQLDRW 1012
P+FY RKK QKD+ E ++ LDR+
Sbjct: 1004 PVFYMRKKVQKDLHEQQVLLDRF 1026
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 142/344 (41%), Positives = 208/344 (60%), Gaps = 20/344 (5%)
Query: 69 ASRLAKW---ARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGV 125
+S L++W AR PL S Y+ + + FQ LD G+ + + + ++R++GV
Sbjct: 3 SSALSQWKSIARLPLPSSYLQK--DVCFQLLDCCQTKGNPHETVSRVRHSEVPVVRLYGV 60
Query: 126 TREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQFVR 181
T EG SV + +EPY +I P P+ + + Q MRE N +++ V
Sbjct: 61 TAEGFSVLVHCYNYEPYLWIEAP----PNWLPVYSQAF---MRELNDQLSNQTRLQDTVV 113
Query: 182 HIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL-DRGIQLDGL--GMKSFMTYE 238
+E+ Q+RS+MY++ + P LKIVV LP + R +L DRG+ G G++ F T+E
Sbjct: 114 RVEVHQRRSLMYFKGGQLVPHLKIVVQLPQHIPKLRSLLSDRGVSCPGAWDGIRVFQTFE 173
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SNV+F LRF++D +I G NW+ + GK+ + S CQ+E C + D+ + P G++
Sbjct: 174 SNVIFPLRFLVDNDIGGSNWLTLTYGKFFASPVKTSTCQIEVVCSHEDVQNHEPLGDYLS 233
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG-EKQPFIRNVMTLKSCAPIVG 357
+APFRILS DIEC GRKG FPEP HDPVIQ+AN G E +P + + TLKSCAPI G
Sbjct: 234 IAPFRILSIDIECQGRKGLFPEPEHDPVIQIANHCVEYGHESEPLTKTIFTLKSCAPIAG 293
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V+S+ETE ++LLAW F++ +DPD++ GYNIC FD PYL+ +
Sbjct: 294 AQVLSYETEAEMLLAWATFMKALDPDILTGYNICNFDFPYLLSR 337
>gi|164655413|ref|XP_001728836.1| hypothetical protein MGL_4003 [Malassezia globosa CBS 7966]
gi|159102722|gb|EDP41622.1| hypothetical protein MGL_4003 [Malassezia globosa CBS 7966]
Length = 970
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/607 (62%), Positives = 470/607 (77%), Gaps = 7/607 (1%)
Query: 388 YNICKFDLPYLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFN 446
Y++ +L E KEDVHHS+I++LQN E RRRLAVYCLKDAYLPQRL+DKLM + N
Sbjct: 339 YSLNSVSFEFLKEQKEDVHHSLITELQNSGPEARRRLAVYCLKDAYLPQRLMDKLMCLIN 398
Query: 447 YVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEA 506
Y EMARVTGVP ++LLSRGQ IKV+SQL RKA++ +IP K G ++ YEGATVL+
Sbjct: 399 YTEMARVTGVPFNYLLSRGQQIKVISQLFRKAREDGYLIPAYKGEGGDE-QYEGATVLDP 457
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVK 565
+ G+Y+KP+ATLDFASLYPSIMMA+NLCY+TLV +L L + TP+ FV
Sbjct: 458 KQGYYDKPVATLDFASLYPSIMMAHNLCYTTLVDKHTIDRLKLVEDKDYVVTPNNNYFVC 517
Query: 566 SNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV 625
++KG+LP++LE LLAARK AK+DLK DPL +AVLDGRQLALK+SANSVYGFTGATV
Sbjct: 518 KTVRKGLLPDVLEALLAARKAAKSDLKNETDPLRRAVLDGRQLALKVSANSVYGFTGATV 577
Query: 626 GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTV 685
G+LPC+EIS SVT+YGRQMIE TK+ VE +T GYEH+A VIYGDTDSVMV+FGV +
Sbjct: 578 GRLPCLEISMSVTAYGRQMIEETKRQVEKHYTVKNGYEHDAVVIYGDTDSVMVKFGVSEL 637
Query: 686 EAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGI 745
E AM+LG EAA+++S +F+KPI+LEFEK+Y+PYLLI+KKRYAGLYWT PE +DKMDTKGI
Sbjct: 638 EKAMQLGAEAAEFVSKSFVKPIRLEFEKIYFPYLLINKKRYAGLYWTRPEHYDKMDTKGI 697
Query: 746 ETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTK 805
ETVRRDNC LV+ ++ CL K+L+DRD+ GA Y K ISDLL N++D+S LVI+K L K
Sbjct: 698 ETVRRDNCRLVRTVIETCLRKMLIDRDVRGAEDYTKQVISDLLQNKIDMSQLVISKALAK 757
Query: 806 TGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 865
DY K AHVELAERMRKRD +AP +GDRV YVI+K +KG+ AYE+SEDP+Y LE+N
Sbjct: 758 A--DYAAKQAHVELAERMRKRDPGSAPALGDRVAYVIVKGSKGSAAYEKSEDPLYALEHN 815
Query: 866 IPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLS 925
IPIDT YYL+NQ+SKPLLRIFEPIL + LLSG+HTR + ++T + +MKFA + +
Sbjct: 816 IPIDTRYYLDNQLSKPLLRIFEPILGARASSLLSGEHTRVLQVATSNVGALMKFAVKTVQ 875
Query: 926 CIGCKALISN--GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVL 983
C+GC+ + + +C +CK RE ELY + V + E EV F RLWT CQ CQGSL DVL
Sbjct: 876 CLGCRTPLKDQKAAVCMNCKPRETELYFEKVQRASEAEVEFSRLWTCCQRCQGSLAHDVL 935
Query: 984 CTSRDCP 990
C+++DCP
Sbjct: 936 CSNQDCP 942
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 130/292 (44%), Positives = 174/292 (59%), Gaps = 28/292 (9%)
Query: 122 IFGVTREGHSVCCKVHGFEPYFYISCPQGMG----PDDISHFHQILEGRMREANRNSKVP 177
++G T EG+ V VHGF PYFY+ P+G PD ++ + G
Sbjct: 1 MYGSTNEGNPVLVHVHGFLPYFYVHAPRGFTMSACPDLRNYLNTTFGG------------ 48
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMT 236
Q V + + K+++M Y ++ FLKI + + RG +RG I L F+T
Sbjct: 49 QCVAEVSLESKKNLMQYTGPENIAFLKITASDLRSLPRIRGAFERGEIAFRDL----FVT 104
Query: 237 YES-----NVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIIS 289
E+ N+ + LRFMID NIVG NWIE+ +Y R + +S CQ+E DC S I S
Sbjct: 105 GETCVSFDNIAYTLRFMIDHNIVGMNWIEIQANQYTLRSPNECISRCQIELDCSPSAIRS 164
Query: 290 RHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTL 349
P GE+ +MAP R LSFDIECAGRKG FP+P DPVIQ+AN+VT GE PF++N+ TL
Sbjct: 165 HAPHGEWLRMAPLRTLSFDIECAGRKGVFPDPNVDPVIQIANMVTRHGESTPFVKNIFTL 224
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+C+ IVG VMSFE E +L AW DF++ VDPDV+IGYNI FD PYL+++
Sbjct: 225 GTCSHIVGCHVMSFENEVQLLEAWSDFVQRVDPDVVIGYNISNFDFPYLLDR 276
>gi|350645608|emb|CCD59733.1| DNA polymerase delta catalytic subunit,putative [Schistosoma mansoni]
Length = 1177
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/634 (60%), Positives = 481/634 (75%), Gaps = 24/634 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I+DLQNG+A+TRRRLAVYCLKDAYLP RLLDKLM I N +EMARVTGVP++
Sbjct: 542 QKEDVHHNVITDLQNGDAQTRRRLAVYCLKDAYLPLRLLDKLMCIVNNIEMARVTGVPLT 601
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG-TYEGATVLEARAGFYEKPIATL 518
+LL+RGQ +KV+SQLLRKA + ++P + S+QG + GATVLE R GFY +PIATL
Sbjct: 602 YLLTRGQQVKVVSQLLRKAHEHGYLLPTYQ---SQQGDEFVGATVLEPRKGFYNEPIATL 658
Query: 519 DFASLYPSIMMAYNLCYSTLV----TPEDA---------RKLNLPPECVNKTPSGETFVK 565
DFASLYPSIMMA+NLCY+TL+ TP + ++ NL E KTP+G FVK
Sbjct: 659 DFASLYPSIMMAHNLCYTTLLQVNTTPHGSTGGGIQALVQRYNLTDEDYIKTPTGAYFVK 718
Query: 566 SNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV 625
S++ GILPEIL++LL+ARK+AKA+L + DPL K VLDGRQLALKISANSVYGFTGA V
Sbjct: 719 SHICHGILPEILQQLLSARKKAKAELAKETDPLRKRVLDGRQLALKISANSVYGFTGAQV 778
Query: 626 GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTV 685
G+LPC+EIS+SVTS+GR MIE TK VE KFT GY+H+A VIYGDTDSVM +FGV TV
Sbjct: 779 GKLPCLEISASVTSFGRLMIEQTKLHVEKKFTIANGYKHDAVVIYGDTDSVMCKFGVSTV 838
Query: 686 EAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGI 745
AM+LGR+AA+ IS F KPI+LEFEKVY PYLLI+KKRYAGLY+T P++ DKMD KGI
Sbjct: 839 TEAMELGRQAAEIISEEFPKPIRLEFEKVYCPYLLINKKRYAGLYFTKPDRHDKMDCKGI 898
Query: 746 ETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTK 805
ETVRRDN LV NL+ CL +IL+DRD A+ Y +S ISDLL NR+D+S LVI+K LTK
Sbjct: 899 ETVRRDNSPLVANLINACLERILIDRDPNAAISYAQSVISDLLCNRIDISQLVISKELTK 958
Query: 806 TGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIK-AAKGAKAYERSEDPIYVLEN 864
T ++Y K AHVELA +MRKRD +APN+GDRVPYVI K AY ++EDP+YVLE+
Sbjct: 959 TDEEYTGKQAHVELAAKMRKRDPGSAPNLGDRVPYVITAVGGKNTAAYAKAEDPLYVLEH 1018
Query: 865 NIPIDTHYYLENQISKPLLRIFEPILK--NASKELLSGDHTRSISISTPSNSGIMKFAKR 922
N+PIDT YYLENQ++ PLLRIFEPIL A LL+G+HTR ++ + + F K
Sbjct: 1019 NVPIDTKYYLENQLANPLLRIFEPILGEVKAKSVLLNGEHTRVKAVVHSTVGQLSAFTKV 1078
Query: 923 QLSCIGCKALI----SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSL 978
+ SCIGC+ L+ ++ LC +C+ R +E+Y K + Q+ LE F LWT+CQ CQ S+
Sbjct: 1079 RASCIGCRTLLPADKTDSALCKYCESRASEIYQKEIVQLNLLEKKFTSLWTECQRCQQSI 1138
Query: 979 HQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRW 1012
H++V+CTSRDCPIFY R K++KD+ EA + R+
Sbjct: 1139 HEEVICTSRDCPIFYMRMKSRKDVDEAYKTIQRF 1172
Score = 278 bits (712), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 198/357 (55%), Gaps = 43/357 (12%)
Query: 91 IMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQG 150
I FQQ D+ + G+ + + IIR+FG+T +GHSVC VHGF PYFY+ P+
Sbjct: 113 ITFQQFDVSHYKGEHLPGMPGATQSPVPIIRLFGITEKGHSVCAHVHGFLPYFYVPAPKD 172
Query: 151 MGPDDISHFHQILEGRM--REANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVA 208
D +S F + L + ++ + V + +K++I + +S PFL+I +A
Sbjct: 173 FSTDHLSAFREALNSMLLKEKSKEFEGLQHLVLRVTCEEKQNIYGFHGNRSLPFLRITLA 232
Query: 209 LPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY-- 266
LP ++A + ILD G+ ++S+ +E+N+ F +RFM D + G +W+E P KY
Sbjct: 233 LPRLIAPAKRILDNGLSFADYSLQSYPAFEANIDFEIRFMTDTQMTGCSWVEAPTQKYHL 292
Query: 267 RKTAKTL---------------------------------------SYCQLEFDCLYSDI 287
R + + L + CQ+EFD + +
Sbjct: 293 RDSTQKLDDMKKAINQKSNHSVNSSTISTTNGCNGVNDQSTLLTNQTRCQIEFDIAWDAL 352
Query: 288 ISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVM 347
I PEG++S +AP RILSFDIECA RKG FP P DPVIQ+AN+V GE PFIRNV
Sbjct: 353 IVHSPEGQWSNIAPLRILSFDIECASRKGVFPVPDKDPVIQIANMVINYGETTPFIRNVF 412
Query: 348 TLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
TL +CAPIVG V+S +TE+++L W F+REVDPD++ GYNI FDLPYLI + +
Sbjct: 413 TLNTCAPIVGSQVISHQTEKELLAKWSAFVREVDPDIITGYNIQNFDLPYLINRANT 469
>gi|256087234|ref|XP_002579779.1| DNA polymerase delta catalytic subunit [Schistosoma mansoni]
Length = 1182
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/632 (60%), Positives = 480/632 (75%), Gaps = 24/632 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I+DLQNG+A+TRRRLAVYCLKDAYLP RLLDKLM I N +EMARVTGVP++
Sbjct: 542 QKEDVHHNVITDLQNGDAQTRRRLAVYCLKDAYLPLRLLDKLMCIVNNIEMARVTGVPLT 601
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG-TYEGATVLEARAGFYEKPIATL 518
+LL+RGQ +KV+SQLLRKA + ++P + S+QG + GATVLE R GFY +PIATL
Sbjct: 602 YLLTRGQQVKVVSQLLRKAHEHGYLLPTYQ---SQQGDEFVGATVLEPRKGFYNEPIATL 658
Query: 519 DFASLYPSIMMAYNLCYSTLV----TPEDA---------RKLNLPPECVNKTPSGETFVK 565
DFASLYPSIMMA+NLCY+TL+ TP + ++ NL E KTP+G FVK
Sbjct: 659 DFASLYPSIMMAHNLCYTTLLQVNTTPHGSTGGGIQALVQRYNLTDEDYIKTPTGAYFVK 718
Query: 566 SNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV 625
S++ GILPEIL++LL+ARK+AKA+L + DPL K VLDGRQLALKISANSVYGFTGA V
Sbjct: 719 SHICHGILPEILQQLLSARKKAKAELAKETDPLRKRVLDGRQLALKISANSVYGFTGAQV 778
Query: 626 GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTV 685
G+LPC+EIS+SVTS+GR MIE TK VE KFT GY+H+A VIYGDTDSVM +FGV TV
Sbjct: 779 GKLPCLEISASVTSFGRLMIEQTKLHVEKKFTIANGYKHDAVVIYGDTDSVMCKFGVSTV 838
Query: 686 EAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGI 745
AM+LGR+AA+ IS F KPI+LEFEKVY PYLLI+KKRYAGLY+T P++ DKMD KGI
Sbjct: 839 TEAMELGRQAAEIISEEFPKPIRLEFEKVYCPYLLINKKRYAGLYFTKPDRHDKMDCKGI 898
Query: 746 ETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTK 805
ETVRRDN LV NL+ CL +IL+DRD A+ Y +S ISDLL NR+D+S LVI+K LTK
Sbjct: 899 ETVRRDNSPLVANLINACLERILIDRDPNAAISYAQSVISDLLCNRIDISQLVISKELTK 958
Query: 806 TGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIK-AAKGAKAYERSEDPIYVLEN 864
T ++Y K AHVELA +MRKRD +APN+GDRVPYVI K AY ++EDP+YVLE+
Sbjct: 959 TDEEYTGKQAHVELAAKMRKRDPGSAPNLGDRVPYVITAVGGKNTAAYAKAEDPLYVLEH 1018
Query: 865 NIPIDTHYYLENQISKPLLRIFEPILK--NASKELLSGDHTRSISISTPSNSGIMKFAKR 922
N+PIDT YYLENQ++ PLLRIFEPIL A LL+G+HTR ++ + + F K
Sbjct: 1019 NVPIDTKYYLENQLANPLLRIFEPILGEVKAKSVLLNGEHTRVKAVVHSTVGQLSAFTKV 1078
Query: 923 QLSCIGCKALI----SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSL 978
+ SCIGC+ L+ ++ LC +C+ R +E+Y K + Q+ LE F LWT+CQ CQ S+
Sbjct: 1079 RASCIGCRTLLPADKTDSALCKYCESRASEIYQKEIVQLNLLEKKFTSLWTECQRCQQSI 1138
Query: 979 HQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
H++V+CTSRDCPIFY R K++KD+ EA Q +
Sbjct: 1139 HEEVICTSRDCPIFYMRMKSRKDVDEAYKQFN 1170
Score = 278 bits (712), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 198/357 (55%), Gaps = 43/357 (12%)
Query: 91 IMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQG 150
I FQQ D+ + G+ + + IIR+FG+T +GHSVC VHGF PYFY+ P+
Sbjct: 113 ITFQQFDVSHYKGEHLPGMPGATQSPVPIIRLFGITEKGHSVCAHVHGFLPYFYVPAPKD 172
Query: 151 MGPDDISHFHQILEGRM--REANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVA 208
D +S F + L + ++ + V + +K++I + +S PFL+I +A
Sbjct: 173 FSTDHLSAFREALNSMLLKEKSKEFEGLQHLVLRVTCEEKQNIYGFHGNRSLPFLRITLA 232
Query: 209 LPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY-- 266
LP ++A + ILD G+ ++S+ +E+N+ F +RFM D + G +W+E P KY
Sbjct: 233 LPRLIAPAKRILDNGLSFADYSLQSYPAFEANIDFEIRFMTDTQMTGCSWVEAPTQKYHL 292
Query: 267 RKTAKTL---------------------------------------SYCQLEFDCLYSDI 287
R + + L + CQ+EFD + +
Sbjct: 293 RDSTQKLDDMKKAINQKSNHSVNSSTISTTNGCNGVNDQSTLLTNQTRCQIEFDIAWDAL 352
Query: 288 ISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVM 347
I PEG++S +AP RILSFDIECA RKG FP P DPVIQ+AN+V GE PFIRNV
Sbjct: 353 IVHSPEGQWSNIAPLRILSFDIECASRKGVFPVPDKDPVIQIANMVINYGETTPFIRNVF 412
Query: 348 TLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
TL +CAPIVG V+S +TE+++L W F+REVDPD++ GYNI FDLPYLI + +
Sbjct: 413 TLNTCAPIVGSQVISHQTEKELLAKWSAFVREVDPDIITGYNIQNFDLPYLINRANT 469
>gi|401427880|ref|XP_003878423.1| putative DNA polymerase delta catalytic subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494671|emb|CBZ29973.1| putative DNA polymerase delta catalytic subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1032
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/623 (59%), Positives = 480/623 (77%), Gaps = 20/623 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQ+G+ ETRRRLAVYCLKDA+LP +LLD+LM I N VEMARVTGVP+
Sbjct: 414 QKEDVHHSIISDLQHGDEETRRRLAVYCLKDAFLPVKLLDRLMCIVNNVEMARVTGVPVG 473
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ IKV S LLRKA++K LV+P V+ G YEGATV++ GFY P+ATLD
Sbjct: 474 WLLERGQQIKVFSMLLRKAQKKKLVVPTVEYTGGSDRGYEGATVIDPIKGFYNCPVATLD 533
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSI++A+NLCYSTLV P DAR P + ++++P+ + FVK + GILPE+L++
Sbjct: 534 FASLYPSIIIAHNLCYSTLVRPADARLY--PEDSLDRSPTSDIFVKKEVFPGILPEVLQD 591
Query: 580 LLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LLAARK A+A +K+ + LE VL+GRQLALK+SANSVYGFTGA VG+LPC+EIS+SVT
Sbjct: 592 LLAARKHARAMMKDVPMNSLEYKVLNGRQLALKVSANSVYGFTGAQVGKLPCLEISASVT 651
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGV-------PTVEAAMKL 691
+YGRQMI+ TK LVE+ + A V+YGDTDSVMV+ ++AAM
Sbjct: 652 AYGRQMIDRTKNLVEELYP-------GARVLYGDTDSVMVKCVTNEKASDKERLQAAMDF 704
Query: 692 GREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRD 751
G EAA+ +S F+ PIKLEFEKVY+PYLL++KKRYAGL WTN ++FDK+D KGIETVRRD
Sbjct: 705 GIEAAEKVSSNFLNPIKLEFEKVYFPYLLMNKKRYAGLLWTNTDRFDKLDAKGIETVRRD 764
Query: 752 NCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE 811
NC LV +V+ L++IL+ R + AV++VK TISDLL+NR+D+S LVITK +K D+Y
Sbjct: 765 NCPLVARMVSGVLNRILIHRSVESAVEFVKGTISDLLLNRLDISNLVITKAFSKAEDEYA 824
Query: 812 VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTH 871
AH+ L ERMR+RD A+AP +GDRV YVIIKAAKGAKAYERSEDPIYVL+NNIPIDT
Sbjct: 825 GAQAHIALVERMRQRDPASAPTIGDRVAYVIIKAAKGAKAYERSEDPIYVLDNNIPIDTQ 884
Query: 872 YYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GIMKFAKRQLSCIGC 929
YYLE+Q++ P+LR+FE +L + S L+ GDHTR I+IS PS + G+M+F K QL CI C
Sbjct: 885 YYLEHQLAPPILRVFEGVLDDPSV-LIKGDHTRHIAISAPSKNAGGLMRFVKIQLQCISC 943
Query: 930 KALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
+A+I G LC +C+ + E+Y K V++ E ++ ++WTQCQ+CQGSL+Q+V+C+SRDC
Sbjct: 944 RAVIKAGALCDNCQDKAPEVYGKIVAKRNHYEAIYSQVWTQCQQCQGSLNQEVICSSRDC 1003
Query: 990 PIFYRRKKAQKDMAEAKLQLDRW 1012
P+FY RKK QKD+ E ++ LDR+
Sbjct: 1004 PVFYMRKKVQKDLHEQQVLLDRF 1026
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/344 (41%), Positives = 207/344 (60%), Gaps = 20/344 (5%)
Query: 69 ASRLAKW---ARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGV 125
+S L++W AR PL + Y+ + + FQ LD G+ + + + ++R++GV
Sbjct: 3 SSALSQWKSVARLPLPASYLDK--ELCFQLLDCCQTKGNPDETVSRVRHSEVPVVRLYGV 60
Query: 126 TREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN----SKVPQFVR 181
T EG SV + +EPY +I P P+ + Q G MRE N +++ V
Sbjct: 61 TAEGFSVLVHCYNYEPYLWIEAP----PNWVDVHSQ---GLMRELNNQLSNQTRLQDTVV 113
Query: 182 HIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL-DRGIQLDGL--GMKSFMTYE 238
+E Q+RS+MY++ + P LKIVV LP + R +L DRG+ G+ G + F T+E
Sbjct: 114 RVEAHQRRSLMYFKGGQLVPHLKIVVQLPQHIPKLRSLLCDRGVSCPGVWDGTRIFQTFE 173
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SNV+F LRF++D +I G NW+ + GK+ + S CQ+E C + D+ + P G++
Sbjct: 174 SNVIFPLRFLVDNDIGGSNWLTLTYGKFFACSAKTSTCQIEVACSHEDVQNHEPLGDYLS 233
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG-EKQPFIRNVMTLKSCAPIVG 357
+APFRILS DIEC GRKG FPEP HDPVIQ+AN G E +P + + TLKSCAPI G
Sbjct: 234 IAPFRILSIDIECQGRKGLFPEPEHDPVIQIANHCVEYGHESEPLTKTIFTLKSCAPIAG 293
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V+S+ETE ++LLAW F++ +DPD++ GYNIC FD PYL+ +
Sbjct: 294 AQVLSYETEAEMLLAWATFMKALDPDILTGYNICNFDFPYLLNR 337
>gi|398021685|ref|XP_003864005.1| DNA polymerase delta catalytic subunit, putative [Leishmania
donovani]
gi|322502239|emb|CBZ37322.1| DNA polymerase delta catalytic subunit, putative [Leishmania
donovani]
Length = 1032
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/623 (59%), Positives = 481/623 (77%), Gaps = 20/623 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQ+G+ ETRRRLAVYCLKDA+LP +LLD+LM I N VEMARVTGVP+
Sbjct: 414 QKEDVHHSIISDLQHGDEETRRRLAVYCLKDAFLPVKLLDRLMCIVNNVEMARVTGVPVG 473
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ IKV S LLRKA++K LV+P V+ G YEGATV++ GFY P+ATLD
Sbjct: 474 WLLERGQQIKVFSMLLRKAQKKKLVVPTVEYTGGSDRGYEGATVIDPIKGFYNCPVATLD 533
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSI++A+NLCYSTLV P DAR P + ++++P+ + FVK + GILPE+L++
Sbjct: 534 FASLYPSIIIAHNLCYSTLVRPADARLY--PEDALDRSPTSDVFVKKEVFPGILPEVLQD 591
Query: 580 LLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LLAARK A+A +K+ + LE VL+GRQLALK+SANSVYGFTGA VG+LPC+EIS+SVT
Sbjct: 592 LLAARKHARAMMKDVPMNSLEYKVLNGRQLALKVSANSVYGFTGAQVGKLPCLEISASVT 651
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGV-------PTVEAAMKL 691
+YGRQMI+ TK LVE+ + A V+YGDTDSVMV+ ++AAM
Sbjct: 652 AYGRQMIDRTKNLVEELYP-------GARVLYGDTDSVMVKCVTDEKSSDKERLQAAMDF 704
Query: 692 GREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRD 751
G EAA+ +S F+KPIKLEFEKVY+PYLL++KKRYAGL WT+ ++FDK+D KGIETVRRD
Sbjct: 705 GIEAAEKVSSNFLKPIKLEFEKVYFPYLLMNKKRYAGLLWTSTDRFDKLDAKGIETVRRD 764
Query: 752 NCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE 811
NC LV +V+ L++IL+ R + AV++VK TISDLL+NR+D+S LVITK +K D+Y
Sbjct: 765 NCPLVARMVSGVLNRILIHRSVESAVEFVKGTISDLLLNRLDISNLVITKAFSKAEDEYA 824
Query: 812 VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTH 871
AH+ L ERMR+RD A+AP +GDRV YVIIKAAKGAKAYERSEDPIYVL+NNIPIDT
Sbjct: 825 GAQAHIALVERMRQRDPASAPTIGDRVAYVIIKAAKGAKAYERSEDPIYVLDNNIPIDTQ 884
Query: 872 YYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GIMKFAKRQLSCIGC 929
YYLE+Q++ P++R+FE +L + S L+ GDHTR I+IS PS + G+M+F K QL CI C
Sbjct: 885 YYLEHQLAPPIMRVFEGVLDDPSV-LIKGDHTRHIAISAPSKNAGGLMRFVKVQLQCISC 943
Query: 930 KALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
+A+I G LC +C+ + E+Y K V++ E ++ ++WTQCQ+CQGSL+Q+V+C+SRDC
Sbjct: 944 RAVIKAGALCDNCQDKAPEVYGKIVAKRNHYEAIYSQVWTQCQQCQGSLNQEVICSSRDC 1003
Query: 990 PIFYRRKKAQKDMAEAKLQLDRW 1012
P+FY RKK QKD+ E ++ LDR+
Sbjct: 1004 PVFYMRKKVQKDLHEQQVLLDRF 1026
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 203/340 (59%), Gaps = 12/340 (3%)
Query: 69 ASRLAKW---ARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGV 125
+S L+ W R PL + Y+ + + FQ LD G+ + + + ++R++GV
Sbjct: 3 SSALSLWKSIVRLPLPASYLHK--DVRFQLLDCCQTKGNPHETVSRVRHSEVPVVRLYGV 60
Query: 126 TREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEM 185
T EG SV + +EPY +I P P F + L ++ + +++ V +E+
Sbjct: 61 TAEGFSVLVHCYNYEPYLWIEAPPNWLPVHSQEFMRELNNQL---SNQTRLQDTVVRVEV 117
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL-DRGIQLDGL--GMKSFMTYESNVL 242
Q+RS+MY++ + P LKIVV LP + R +L DRG+ G G + F T+ESNV+
Sbjct: 118 HQRRSLMYFKGGQLVPHLKIVVQLPQHIPKLRSLLSDRGVSCPGAWDGTRVFQTFESNVI 177
Query: 243 FALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPF 302
F LRF++D +I G NW+ + GK+ + S CQ+E C + D+ + P G++ +APF
Sbjct: 178 FPLRFLVDNDIGGSNWLTLTYGKFFASPIKTSTCQIEVACSHEDVQNHEPLGDYLSIAPF 237
Query: 303 RILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG-EKQPFIRNVMTLKSCAPIVGVDVM 361
RILS DIEC GRKG FPEP HDPVIQ+AN G E +P + + TLKSCAPI G V+
Sbjct: 238 RILSIDIECQGRKGLFPEPEHDPVIQIANHCVEYGHESEPLTKTIFTLKSCAPIAGAQVL 297
Query: 362 SFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
S+ETE ++LLAW F++ +DPD++ GYNIC FD PYL+ +
Sbjct: 298 SYETEAEMLLAWATFMKALDPDILTGYNICNFDFPYLLNR 337
>gi|224002805|ref|XP_002291074.1| DNA polymerase [Thalassiosira pseudonana CCMP1335]
gi|220972850|gb|EED91181.1| DNA polymerase, partial [Thalassiosira pseudonana CCMP1335]
Length = 999
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/620 (60%), Positives = 472/620 (76%), Gaps = 10/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNG R RLAVYCLKDA LPQRL+DKL + NYVEMARVTGVP+S
Sbjct: 381 QKEDVHHSIISDLQNGTDADRHRLAVYCLKDALLPQRLMDKLSVLINYVEMARVTGVPVS 440
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQ--AGSEQGTYEGATVLEARAGFYEKPIAT 517
FL+SRGQ IKV S +LRK + NLV+P +++ AG+++G YEGATVL+ +YE PIAT
Sbjct: 441 FLISRGQQIKVFSMILRKCRDVNLVVPTLRKSGAGADEG-YEGATVLDPIKSYYEVPIAT 499
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
LDFASLYPSIM AYNLCYST+V+ +A K++ P ++ +G TFV SN++KGILP IL
Sbjct: 500 LDFASLYPSIMQAYNLCYSTMVSQHEASKID--PSKYKRSENGHTFVHSNVKKGILPIIL 557
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
EELL+ARKRAK D+K A + EK+V +GRQLALK+SANSVYGFTGA VGQLPC+ I+SSV
Sbjct: 558 EELLSARKRAKKDMKNAPNDFEKSVQNGRQLALKVSANSVYGFTGAGVGQLPCVPIASSV 617
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
T+YGR ++E TK VE+ +T GY+HNA+V+YGDTDSVMV+FG TV L EAA+
Sbjct: 618 TAYGRFLLEKTKAYVEEHYTVAHGYKHNAKVVYGDTDSVMVKFGTATVAETFPLAIEAAE 677
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
S F PI LEFEKVYYPYLL++KKRYAGL WT EK+D MDTKG+ETVRRDNC LV+
Sbjct: 678 KCSAIFPDPILLEFEKVYYPYLLMNKKRYAGLMWTQVEKYDYMDTKGLETVRRDNCALVR 737
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ L+KI+++R++PGA+ YVKS I+DLL N+MD+S LVITK L +DY+VK AHV
Sbjct: 738 EVIQTSLNKIIIERNVPGAIDYVKSQIADLLQNKMDISRLVITKSLGGKAEDYKVKQAHV 797
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA RMRKRDA +AP +GDRVPYVII AAKGA +E++EDPIYVLENNIPID +YL NQ
Sbjct: 798 ELAARMRKRDAGSAPQMGDRVPYVIITAAKGAANFEKAEDPIYVLENNIPIDCKWYLSNQ 857
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPS--NSGIMKFAKRQLSCIGCKALI-- 933
+SKPL RIFEPI+ N K LL GDHTR I I TP+ +M FA ++ +C+GCKA I
Sbjct: 858 LSKPLTRIFEPIIDNVEKSLLQGDHTRKIFIPTPTAKKGSLMMFAHKKATCMGCKASINE 917
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI-F 992
+ G LC +C +E ++Y + ++ ++E E+ + LW++ Q G+L D++CT C F
Sbjct: 918 NEGNLCKYCLPKEVQIYLEKLAVLKEAELRYAHLWSEAQRIHGTLLTDIMCTGDGCACQF 977
Query: 993 YRRKKAQKDMAEAKLQLDRW 1012
YRRKK Q D+ A+ Q+D++
Sbjct: 978 YRRKKVQNDIRLAQEQVDKF 997
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/307 (41%), Positives = 190/307 (61%), Gaps = 24/307 (7%)
Query: 115 GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANR-N 173
G+ +IR++GV G+SV +HGF PY Y + P+G+ S F G+ + N N
Sbjct: 1 GAVPVIRLYGVNETGNSVAVFIHGFTPYGYFALPRGLRAKLGSQF-----GKGLQVNGGN 55
Query: 174 SKVPQFVRHIEMVQKR-SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL--- 229
+ PQ ++ ++ R SIM Y ++ FLK+ + +P M+ + I++ G+ L G+
Sbjct: 56 GQQPQACLGVQFLKDRQSIMGYDPSHTK-FLKVYLGMPGMIPKLKSIMEEGLVLPGIVRV 114
Query: 230 -------GMKS---FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR---KTAKTLSYC 276
G+ F YE NV F LR+MID +I G +W+ +P G YR + ++C
Sbjct: 115 DANGNSVGVNESMIFQPYECNVPFVLRYMIDRDITGASWLSLPKGTYRLRQTENEKGTHC 174
Query: 277 QLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQ 336
Q+E D +++II R PEGE+SK+AP RILSFDIEC GRKG+FPE HDPVIQ+AN +++
Sbjct: 175 QIEADICFNEIIPRKPEGEWSKVAPLRILSFDIECQGRKGYFPEAEHDPVIQIANCLSVY 234
Query: 337 GEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLP 396
G+K P ++N+ TLK C PIVG V+S ETE+++LL WR F+ D D+ GYN+ FD+P
Sbjct: 235 GDKAPIVQNIFTLKGCLPIVGAQVISSETEQEMLLKWRTFLHASDADIFTGYNVQNFDIP 294
Query: 397 YLIEKED 403
YL+++ +
Sbjct: 295 YLLDRAE 301
>gi|146097987|ref|XP_001468284.1| putative DNA polymerase delta catalytic subunit [Leishmania infantum
JPCM5]
gi|134072651|emb|CAM71367.1| putative DNA polymerase delta catalytic subunit [Leishmania infantum
JPCM5]
Length = 1032
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/623 (59%), Positives = 481/623 (77%), Gaps = 20/623 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQ+G+ ETRRRLAVYCLKDA+LP +LLD+LM I N VEMARVTGVP+
Sbjct: 414 QKEDVHHSIISDLQHGDEETRRRLAVYCLKDAFLPVKLLDRLMCIVNNVEMARVTGVPVG 473
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ IKV S LLRKA++K LV+P V+ G YEGATV++ GFY P+ATLD
Sbjct: 474 WLLERGQQIKVFSMLLRKAQKKKLVVPTVEYTGGSDRGYEGATVIDPIKGFYNCPVATLD 533
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSI++A+NLCYSTLV P DAR P + ++++P+ + FVK + GILPE+L++
Sbjct: 534 FASLYPSIIIAHNLCYSTLVRPADARLY--PEDALDRSPTSDVFVKKEVFPGILPEVLQD 591
Query: 580 LLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LLAARK A+A +K+ + LE VL+GRQLALK+SANSVYGFTGA VG+LPC+EIS+SVT
Sbjct: 592 LLAARKHARAMMKDVPMNSLEYKVLNGRQLALKVSANSVYGFTGAQVGKLPCLEISASVT 651
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGV-------PTVEAAMKL 691
+YGRQMI+ TK LVE+ + A V+YGDTDSVMV+ ++AAM
Sbjct: 652 AYGRQMIDRTKNLVEELYP-------GARVLYGDTDSVMVKCVTDEKSSDKERLQAAMDF 704
Query: 692 GREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRD 751
G EAA+ +S F+KPIKLEFEKVY+PYLL++KKRYAGL WT+ ++FDK+D KGIETVRRD
Sbjct: 705 GIEAAEKVSSNFLKPIKLEFEKVYFPYLLMNKKRYAGLLWTSTDRFDKLDAKGIETVRRD 764
Query: 752 NCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE 811
NC LV +V+ L++IL+ R + AV++VK TISDLL+NR+D+S LVITK +K D+Y
Sbjct: 765 NCPLVARMVSGVLNRILIHRSVESAVEFVKGTISDLLLNRLDISNLVITKAFSKAEDEYA 824
Query: 812 VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTH 871
AH+ L ERMR+RD A+AP +GDRV YVIIKAAKGAKAYERSEDPIYVL+NNIPIDT
Sbjct: 825 GAQAHIALVERMRQRDPASAPTIGDRVAYVIIKAAKGAKAYERSEDPIYVLDNNIPIDTQ 884
Query: 872 YYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GIMKFAKRQLSCIGC 929
YYLE+Q++ P++R+FE +L + S L+ GDHTR I+IS PS + G+M+F K QL CI C
Sbjct: 885 YYLEHQLAPPIMRVFEGVLDDPSV-LIKGDHTRHIAISAPSKNAGGLMRFVKVQLQCISC 943
Query: 930 KALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
+A+I G LC +C+ + E+Y K V++ E ++ ++WTQCQ+CQGSL+Q+V+C+SRDC
Sbjct: 944 RAVIKAGALCDNCQDKAPEVYGKIVAKRNHYEAIYSQVWTQCQQCQGSLNQEVICSSRDC 1003
Query: 990 PIFYRRKKAQKDMAEAKLQLDRW 1012
P+FY RKK QKD+ E ++ LDR+
Sbjct: 1004 PVFYMRKKVQKDLYEQQVLLDRF 1026
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 203/340 (59%), Gaps = 12/340 (3%)
Query: 69 ASRLAKW---ARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGV 125
+S L+ W R PL + Y+ + + FQ LD G+ + + + ++R++GV
Sbjct: 3 SSALSLWKSIVRLPLPASYLHK--DVRFQLLDCCQTKGNPHETVSRVRHSEVPVVRLYGV 60
Query: 126 TREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEM 185
T EG SV + +EPY +I P P F + L ++ + +++ V +E+
Sbjct: 61 TAEGFSVLVHCYNYEPYLWIEAPPNWLPVHSQEFMRELNNQL---SNQTRLQDTVVRVEV 117
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL-DRGIQLDGL--GMKSFMTYESNVL 242
Q+RS+MY++ + P LKIVV LP + R +L DRG+ G G + F T+ESNV+
Sbjct: 118 HQRRSLMYFKGGQLVPHLKIVVQLPQHIPKLRSLLSDRGVSCPGAWDGTRVFQTFESNVI 177
Query: 243 FALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPF 302
F LRF++D +I G NW+ + GK+ + S CQ+E C + D+ + P G++ +APF
Sbjct: 178 FPLRFLVDNDIGGSNWLTLTYGKFFASPIKTSTCQIEVACSHEDVQNHEPLGDYLSIAPF 237
Query: 303 RILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG-EKQPFIRNVMTLKSCAPIVGVDVM 361
RILS DIEC GRKG FPEP HDPVIQ+AN G E +P + + TLKSCAPI G V+
Sbjct: 238 RILSIDIECQGRKGLFPEPEHDPVIQIANHCVEYGHESEPLTKTIFTLKSCAPIAGAQVL 297
Query: 362 SFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
S+ETE ++LLAW F++ +DPD++ GYNIC FD PYL+ +
Sbjct: 298 SYETEAEMLLAWATFMKALDPDILTGYNICNFDFPYLLNR 337
>gi|407396863|gb|EKF27570.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 1029
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/626 (60%), Positives = 481/626 (76%), Gaps = 22/626 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQ G+ ETRRRLAVYCLKDA LP +LLD+LM I N VEMARVTGVPI
Sbjct: 409 QKEDVHHSIISDLQQGSEETRRRLAVYCLKDALLPVKLLDRLMVIVNNVEMARVTGVPIE 468
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGS--EQGTYEGATVLEARAGFYEKPIAT 517
+LL RGQ IKV S +LRKAK K+L++P V+ +G +Q YEGATV+E GFY PI T
Sbjct: 469 WLLERGQQIKVFSMMLRKAKAKDLLVPAVEYSGGGGDQRGYEGATVIEPLKGFYNCPIVT 528
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
LDFASLYPSI++A+NLCYSTLV P D + P E +++TP+G+TFVK L GILPE+L
Sbjct: 529 LDFASLYPSIIIAHNLCYSTLVRPSDIARY--PAEMLSRTPTGDTFVKKELFPGILPEVL 586
Query: 578 EELLAARKRAKADLKEA-KDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
++LLAARKRAK+ +K+ + LE VL+GRQLALKISANSVYGFTGA +G+LPC+E+SSS
Sbjct: 587 QDLLAARKRAKSLMKDVPMESLEYKVLNGRQLALKISANSVYGFTGAQIGKLPCLEVSSS 646
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGV-------PTVEAAM 689
VT+YGR MI+ TK LVE + V +V+YGDTDSVM++ +E AM
Sbjct: 647 VTAYGRLMIDQTKSLVESLYPGV-------KVVYGDTDSVMIKCVTDEKGTEKERLEYAM 699
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
G+ AA+ +S F+ PIKLEFEKVY+PYLL++KKRYAGL WTN E++DK+D KGIETVR
Sbjct: 700 TFGKGAAEEVSSHFLNPIKLEFEKVYFPYLLMNKKRYAGLLWTNTERYDKLDAKGIETVR 759
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RDNC LV ++++ L++IL+ R + AV++VK TI DLL+NR+D+S LVITK +K ++
Sbjct: 760 RDNCPLVASVISGVLNRILIQRSVDSAVEFVKGTIRDLLLNRLDISHLVITKTFSKAENE 819
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPID 869
Y AHV L ERMRKRD A+APN+GDRV YVI++AAKGAKAYERSEDPIYVLENNIPID
Sbjct: 820 YAGAQAHVALVERMRKRDPASAPNIGDRVAYVIVRAAKGAKAYERSEDPIYVLENNIPID 879
Query: 870 THYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GIMKFAKRQLSCI 927
T YYLE+Q++ PLLR+FE +L + S L+ GDHTR I +S PS + G+MKF K QL CI
Sbjct: 880 TQYYLEHQLAPPLLRVFEGVLDDPSV-LIKGDHTRHILVSAPSKNAGGLMKFVKIQLQCI 938
Query: 928 GCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSR 987
C+A+I G LC +C+ +EA++Y K V++ E ++ ++WTQCQ+CQGSL+Q+V+CTS+
Sbjct: 939 SCRAIIKEGALCDNCRHKEADVYGKIVAKRNHYEAIYSQVWTQCQQCQGSLNQEVICTSK 998
Query: 988 DCPIFYRRKKAQKDMAEAKLQLDRWN 1013
DCP+FY RKK QKD+ E + LDR+
Sbjct: 999 DCPVFYMRKKVQKDVKEQQTLLDRFG 1024
Score = 258 bits (660), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 199/338 (58%), Gaps = 14/338 (4%)
Query: 72 LAKWA---RPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTRE 128
+++W RP LS Y+ + ++FQ LD G ++ + + I+R++GVT+E
Sbjct: 1 MSQWEGLYRPQLSPEYLQR--DLLFQLLDCCQTKGCAHPTVSRVRHAENPIVRLYGVTKE 58
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQFVRHIEMVQ 187
GHSV + +EPY +I P+G P + Q+L+ + + + + V IE+ +
Sbjct: 59 GHSVLVHCYNYEPYLWIKAPKGWLP----AYSQLLKAELNAQLDSLTHASDTVVRIEVHK 114
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL-DRGIQLDGL--GMKSFMTYESNVLFA 244
++SIMYYQ + LKIVV LP + R +L DRG+ G G++ F TYESNV+F
Sbjct: 115 RQSIMYYQGEGLTEHLKIVVQLPQHIPRLRTLLSDRGVACAGAWDGVRVFPTYESNVIFP 174
Query: 245 LRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
LRF++D I G NW+ +PVG + + S CQ+E C + + + G++ +APFRI
Sbjct: 175 LRFIVDNCISGCNWLTIPVGSFLIATERTSTCQIELCCSHEAVQNHDAVGQYLSIAPFRI 234
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVAN-LVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSF 363
LS DIEC G+KG FP+P DPVIQ+AN + E +P R V TLKSC PI G V S+
Sbjct: 235 LSIDIECQGKKGLFPDPEDDPVIQIANHCINYGNEAEPLTRTVFTLKSCGPIAGARVCSY 294
Query: 364 ETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
ETE ++LL W F++ +DPD+ GYNI FD PYL+ +
Sbjct: 295 ETEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNR 332
>gi|324120738|dbj|BAJ78760.1| DNA polymerase delta catalytic subunit [Anacanthocoris striicornis]
Length = 1091
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/618 (60%), Positives = 470/618 (76%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNGN +TRRRLAVYCLKDAYLP +LLDKLM + NY+EMARVTGV +S
Sbjct: 472 QKEDVHHSIISDLQNGNEQTRRRLAVYCLKDAYLPIKLLDKLMCVINYMEMARVTGVSLS 531
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RGQ IKV+SQLLRK+ + ++P + S + +EGATV+E G+Y+ PIATLD
Sbjct: 532 ALLTRGQQIKVMSQLLRKSMESGYLLPTHRVNDSSE-QFEGATVIEPLKGYYKDPIATLD 590
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIM+A+NLCYSTL+ + L L P+ + TP FVK++++KG+LP+ILE
Sbjct: 591 FSSLYPSIMIAHNLCYSTLIHAQQRNALGLSPDQYSTTPCENYFVKTSVRKGLLPQILES 650
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AK DLK DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 651 LLTARKKAKFDLKNETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 710
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE ++ GY+ ++ V+YGDTDSVMV+FGV ++E AMKLG+EAA+Y+
Sbjct: 711 YGRTMIERTKQEVEQRYCIKNGYKFDSIVVYGDTDSVMVKFGVDSLEEAMKLGKEAAEYV 770
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FI PIKLEFEKVY+PYLLI+KKRYAGLY+T +++DKMD KG+ETVRRDNC LV NL
Sbjct: 771 STKFISPIKLEFEKVYWPYLLINKKRYAGLYYTKLDEYDKMDCKGLETVRRDNCPLVANL 830
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+D+D A+ Y K ISDLL NR+D+S LVITK L KT DY K AHVEL
Sbjct: 831 LNTCLQKLLIDKDPDAAINYAKQQISDLLCNRLDISQLVITKELAKT--DYAGKQAHVEL 888
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A +M+KRDA +AP +GDRVP+VI+ AAK AY+++EDP+YVLENNIP+DT YYLENQ++
Sbjct: 889 ANKMKKRDAGSAPKLGDRVPFVIVAAAKSTPAYQKAEDPMYVLENNIPLDTTYYLENQLA 948
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----S 934
KPLLRIF PIL + A LL G+HTR+ S+ T + F K++ +C+GCK ++
Sbjct: 949 KPLLRIFSPILGEKAESILLRGEHTRTKSVVTSKVGALAAFTKKKETCLGCKTILPTSEE 1008
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LC HC + + S+++ LE F RLWTQCQ CQGSLH++V+CTSRDCPIFY
Sbjct: 1009 GNPLCKHCSSKYPLVLESEFSKLRNLEEKFNRLWTQCQRCQGSLHEEVICTSRDCPIFYM 1068
Query: 995 RKKAQKDMAEAKLQLDRW 1012
RKK Q D+ + R+
Sbjct: 1069 RKKVQMDLINQDNTVQRF 1086
Score = 300 bits (768), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/344 (45%), Positives = 211/344 (61%), Gaps = 8/344 (2%)
Query: 67 DFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVT 126
D AS AKW+RP I FQQL+ID+ IG + I+R++GVT
Sbjct: 56 DTASTTAKWSRP-PPPPINPDVDGISFQQLEIDHYIGYPAPNMPGSQWPPVPIMRMYGVT 114
Query: 127 REGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILE-GRMREANRN-SKVPQFVRHIE 184
EG+SVCC VHGF PYFY+ P + I F L+ G + + N V + V +E
Sbjct: 115 MEGNSVCCHVHGFTPYFYVLTPTTFKEEHIKPFKDALDRGILDDMKSNPDNVQEAVVGVE 174
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFA 244
+V ++SI Y PFLKI VA+P ++A+ + I+++ +E+N+ F
Sbjct: 175 LVYRQSIFGYSGDAKFPFLKISVAVPKLIATAKRIIEKNDIFPTFPGFYGQVFETNIDFD 234
Query: 245 LRFMIDCNIVGGNWIEVPVGKYR-KTAKT----LSYCQLEFDCLYSDIISRHPEGEFSKM 299
+RFM+D I G NWIE+ Y +T T LS CQ+E D ++ I+S PEG++ K+
Sbjct: 235 IRFMVDNKITGCNWIELHPKSYSLRTPDTTRIPLSRCQIEVDVAFNRIVSHEPEGDWLKI 294
Query: 300 APFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVD 359
APFRILSFDIECAGRKG FPEP DPVIQ+AN+V QGE +PFIRN+ TLKSCAPI+G
Sbjct: 295 APFRILSFDIECAGRKGIFPEPNQDPVIQIANMVVCQGEHEPFIRNIFTLKSCAPILGSQ 354
Query: 360 VMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
V+SFE ER++L W +F+REVDPD+ GYNI FD PYLI + +
Sbjct: 355 VISFEDERELLEKWAEFVREVDPDLFTGYNINNFDFPYLINRAN 398
>gi|342179963|emb|CCC89437.1| putative DNA polymerase delta catalytic subunit [Trypanosoma
congolense IL3000]
Length = 1026
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/625 (59%), Positives = 474/625 (75%), Gaps = 20/625 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQ GN ETRRRLAVYCLKDAYLP +LLD+LM + N VEMARVTGVPI+
Sbjct: 408 QKEDVHHSIISDLQQGNDETRRRLAVYCLKDAYLPVKLLDRLMVVVNNVEMARVTGVPIA 467
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ IKV S LLRKA+ +NLV+P + +G +Q YEGATV+E R GFY PI TLD
Sbjct: 468 WLLERGQQIKVFSMLLRKARARNLVVPTTENSGIDQRGYEGATVIEPRKGFYNCPIVTLD 527
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSI++A+NLCYSTLV +A K + + +++TP+G FV+ N+ GILPE+L++
Sbjct: 528 FASLYPSIIIAHNLCYSTLVRQSEADKYD--KDMISRTPTGHVFVRDNVFPGILPEVLQD 585
Query: 580 LLAARKRAKADLKE-AKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LLAARK A+ +K+ + D LE VL+GRQLALK+SANSVYGFTGA +G+LPC+E+SSSVT
Sbjct: 586 LLAARKNARTLMKDVSPDSLEYKVLNGRQLALKVSANSVYGFTGAQIGRLPCLELSSSVT 645
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQ-------FGVPTVEAAMKL 691
YGR MI+ TK+ VE ++ A V+YGDTDSVM++ +++ AM+
Sbjct: 646 GYGRMMIDETKRFVETQY-------QGAMVVYGDTDSVMIKRVSEEPMSDKDSLQRAMEF 698
Query: 692 GREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRD 751
G+EAA+ +S F KPIKLEFEKVY+PYLL++KKRYAGL WTN + DK+D KGIETVRRD
Sbjct: 699 GKEAAEVVSSNFPKPIKLEFEKVYFPYLLMNKKRYAGLLWTNTVRHDKLDAKGIETVRRD 758
Query: 752 NCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE 811
NC LV ++++ L++IL+ R + AV++VK TI DLL+NR+D+S LVITK +K+ D+Y
Sbjct: 759 NCPLVASVISGVLNRILIQRSVESAVEFVKGTIRDLLLNRLDISQLVITKSFSKSEDEYA 818
Query: 812 VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTH 871
AH+ L ERMRKRD A+APNVGDRV YVI++AAKG+KAYERSEDPIYVL+NNIPIDT
Sbjct: 819 GAQAHIALVERMRKRDPASAPNVGDRVAYVIVRAAKGSKAYERSEDPIYVLDNNIPIDTQ 878
Query: 872 YYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSN--SGIMKFAKRQLSCIGC 929
YYLE+Q++ PLLR+FE ++ + S L GDHTR IS+S PS G+MKF K QL CI C
Sbjct: 879 YYLEHQLAPPLLRVFEGVIPDPS-SLTKGDHTRHISVSAPSRCAGGLMKFVKFQLQCISC 937
Query: 930 KALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
+++I G LC C E+Y K V++ E ++ ++WTQCQ+CQGSL Q V+CTSRDC
Sbjct: 938 RSVIKEGALCDRCSSMGPEIYGKIVAKRNHYEAIYSQVWTQCQQCQGSLKQMVICTSRDC 997
Query: 990 PIFYRRKKAQKDMAEAKLQLDRWNF 1014
P+FY RKK QKD+ E + LDR+
Sbjct: 998 PVFYLRKKVQKDVKEQQALLDRFGI 1022
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 131/329 (39%), Positives = 190/329 (57%), Gaps = 8/329 (2%)
Query: 76 ARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCK 135
+RP + + Y+ ++FQ LD G N + + I+R++GVT EGHSV
Sbjct: 8 SRPQVPADYLKG--DLLFQLLDCCQTQGPPNGFVSTVKHEDVPIVRLYGVTMEGHSVLVH 65
Query: 136 VHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQ 195
+ FEP+ +I P P F Q L + + + V +E+ ++RS+M+Y
Sbjct: 66 CYNFEPFLWIQAPANWLPVHSKTFKQELNTVL---DPTTHATDTVVRVEVHKRRSLMFYD 122
Query: 196 QQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL--GMKSFMTYESNVLFALRFMIDCNI 253
+LKIVV LP + RG+L G+ G+ G +SF T+ESN++F LRF++D NI
Sbjct: 123 PNGESDYLKIVVQLPQHIPKLRGLLSSGVVCVGVWEGTRSFQTFESNIIFPLRFLVDNNI 182
Query: 254 VGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAG 313
G NW+ +P G++ A S CQ+E C + + + G + +APFRILS DIEC G
Sbjct: 183 GGCNWVTIPAGQHHSFAPRTSTCQIEVCCSHESLQNHDAVGRYLLIAPFRILSIDIECEG 242
Query: 314 RKGHFPEPTHDPVIQVANLVTLQG-EKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLA 372
RKG FPE DPVIQ+AN G E R V TL +C PI G +V S+ETE ++LLA
Sbjct: 243 RKGLFPEAEKDPVIQIANHCINYGVEGDALTRTVFTLNTCGPIAGANVHSYETEEEMLLA 302
Query: 373 WRDFIREVDPDVMIGYNICKFDLPYLIEK 401
W F++E+DPD++ GYN+CKFD PYL+++
Sbjct: 303 WLRFVKEIDPDILTGYNVCKFDFPYLLDR 331
>gi|154344040|ref|XP_001567964.1| putative DNA polymerase delta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134065298|emb|CAM40726.1| putative DNA polymerase delta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 1032
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/624 (59%), Positives = 475/624 (76%), Gaps = 20/624 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQ G+ ETRRRLAVYCLKDA LP +LLD+LM I N VEMARVTGVP+
Sbjct: 414 QKEDVHHSIISDLQQGDEETRRRLAVYCLKDALLPVKLLDRLMCIVNNVEMARVTGVPVG 473
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ IKV S LLRKA++K LV+P V+ G YEGATV++ GFY P+ATLD
Sbjct: 474 WLLERGQQIKVFSMLLRKAQKKKLVVPTVEYTGGSDRGYEGATVIDPIKGFYNCPVATLD 533
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSI++A+NLCYSTLV P DAR P + ++++P+ + FVK ++ GILPE+L++
Sbjct: 534 FASLYPSIIIAHNLCYSTLVRPADARLY--PEDALDRSPTSDVFVKKDVFPGILPEVLQD 591
Query: 580 LLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LLAARK A+A +K+ LE VL+GRQLALK+SANSVYGFTGA VG+LPC+EIS+SVT
Sbjct: 592 LLAARKHARAMMKDVPMHSLEYKVLNGRQLALKVSANSVYGFTGAQVGKLPCLEISASVT 651
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPT-------VEAAMKL 691
+YGRQMI+ TK LVE + V+YGDTDSVMV+ ++AAM
Sbjct: 652 AYGRQMIDKTKNLVEQLYP-------GTRVLYGDTDSVMVKCVTDEKASDKERLQAAMDF 704
Query: 692 GREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRD 751
G EAA+ +S F+KPIKLEFEKVY+PYLL++KKRYAGL WTN ++FDK+D KGIETVRRD
Sbjct: 705 GIEAAERVSSDFLKPIKLEFEKVYFPYLLMNKKRYAGLLWTNTDQFDKLDAKGIETVRRD 764
Query: 752 NCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE 811
NC LV +V+ L++IL+ R + A+ +VK TISDLL+NR+D+S LVITK +K D+Y
Sbjct: 765 NCPLVARMVSGVLNRILIHRSVESAIDFVKGTISDLLLNRLDISNLVITKAFSKAEDEYA 824
Query: 812 VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTH 871
AH+ L ERMR+RD A+AP +GDRV YVIIKAAKGAKAYERSEDPIYVL+NNIPIDT
Sbjct: 825 GAQAHIALVERMRQRDPASAPTIGDRVAYVIIKAAKGAKAYERSEDPIYVLDNNIPIDTQ 884
Query: 872 YYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GIMKFAKRQLSCIGC 929
YYLE+Q++ P+LR+FE +L + S L+ GDHTR I+IS PS + G+M+F K QL CI C
Sbjct: 885 YYLEHQLAPPILRVFEGVLDDPSV-LIKGDHTRHIAISAPSKNAGGLMRFVKVQLQCISC 943
Query: 930 KALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
+A+I G LC +C+ + E+Y K +++ E ++ ++WTQCQ+CQGSLHQ+V+C+SRDC
Sbjct: 944 RAVIKEGALCDNCQEKAPEVYGKIMAKRNHYEAIYSQVWTQCQQCQGSLHQEVICSSRDC 1003
Query: 990 PIFYRRKKAQKDMAEAKLQLDRWN 1013
P+FY RKK QKD+ E + LDR+
Sbjct: 1004 PVFYMRKKVQKDLHEQQALLDRFG 1027
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 12/340 (3%)
Query: 69 ASRLAKW---ARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGV 125
+S L +W R L + Y+ + + FQ LD G+ + + + ++R++GV
Sbjct: 3 SSTLLQWRSIMRASLPAAYLDK--HLCFQLLDCCQTKGNPHETVSRVRHTEVPVVRLYGV 60
Query: 126 TREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEM 185
T EG SV + +EPY +I P+ P F + L ++ + +++ V +E+
Sbjct: 61 TAEGFSVLVHCYNYEPYLWIEAPRNWLPVHSQGFVRELNNQL---SNQTRLQDTVVRVEV 117
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL-DRGIQLDGL--GMKSFMTYESNVL 242
Q+RS+MY++ + P LKIVV LP + R +L DRG+ G G++ F T+ESNV+
Sbjct: 118 HQRRSLMYFKGGQLVPHLKIVVQLPQHIPKLRSLLSDRGVSCPGAWDGIRIFPTFESNVI 177
Query: 243 FALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPF 302
F LRF++D I G NW+ + GK+ S CQ+E C + D+ + P G++ +APF
Sbjct: 178 FPLRFLVDNEIGGSNWLTLTSGKFVSCPLKTSTCQIEVACSHEDVQNHEPLGDYLSIAPF 237
Query: 303 RILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG-EKQPFIRNVMTLKSCAPIVGVDVM 361
RILS DIEC GRKG FPEP HDPVIQ+AN G E +P + + TLKSCAPI G V
Sbjct: 238 RILSIDIECQGRKGLFPEPEHDPVIQIANYCVEYGHESEPLTKTIFTLKSCAPIAGAQVF 297
Query: 362 SFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
S+ETE D+LLAW F++ +DPD++ GYNIC FD PYL+ +
Sbjct: 298 SYETEADMLLAWATFMKALDPDILTGYNICNFDFPYLLNR 337
>gi|422294898|gb|EKU22198.1| DNA polymerase delta subunit 1 [Nannochloropsis gaditana CCMP526]
Length = 569
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/572 (64%), Positives = 448/572 (78%), Gaps = 10/572 (1%)
Query: 450 MARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAG 509
MARVTGVP++FLL+RGQ IKV S LLRK +Q L+IPN+ + ++GTYEGATV+E +
Sbjct: 1 MARVTGVPMAFLLTRGQQIKVFSMLLRKCRQSALLIPNLPKNRQDEGTYEGATVIEPKKA 60
Query: 510 FYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQ 569
FY+ PIATLDFASLYPSIM A+NLCYSTL++ E+ K LPP TPS E+FVK +++
Sbjct: 61 FYQDPIATLDFASLYPSIMQAFNLCYSTLLSREE--KQALPPSSYITTPSQESFVKPSVR 118
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
KGILP IL+ELLAARKRAK D+ A DP+EKAV +GRQLALKISANSVYGFTGATVGQLP
Sbjct: 119 KGILPLILDELLAARKRAKRDMAAATDPMEKAVQNGRQLALKISANSVYGFTGATVGQLP 178
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAM 689
CI I+SSVTSYGR ++ TK VE+ +T G NAEV+YGDTDSVMV+FGVPTVE AM
Sbjct: 179 CIPIASSVTSYGRDLLYQTKAFVEEHYTIEKGCSANAEVVYGDTDSVMVRFGVPTVEEAM 238
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
L AA+ ++ F PIKLEFEKVY+PYLL++KKRYAGL WT P+K+DK+DTKG+ETVR
Sbjct: 239 PLAERAAEEVTKIFPPPIKLEFEKVYFPYLLMNKKRYAGLLWTRPDKYDKLDTKGLETVR 298
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RDNCLLV+ ++ CL KIL+DRD+PGA+ Y K I++LL N+MD+SLLVITK L K+ D+
Sbjct: 299 RDNCLLVRRVIDTCLRKILIDRDVPGAIGYCKHVIAELLQNKMDISLLVITKALGKSADE 358
Query: 810 --YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP 867
Y K AHVELA RM+KRD TAPNVGDRV YVII+A KGA AYERSEDP+YVLEN IP
Sbjct: 359 SGYAAKQAHVELAMRMKKRDPGTAPNVGDRVAYVIIQAGKGAPAYERSEDPVYVLENRIP 418
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPS--NSGIMKFAKRQLS 925
IDT YYL+NQ+S PL R+FEPI+ N + LLSGDHTRSI+ TP+ GIM FA ++L
Sbjct: 419 IDTDYYLQNQLSNPLTRLFEPIIDN-PESLLSGDHTRSIARPTPTAKAGGIMMFAVKKLK 477
Query: 926 CIGCKALI---SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV 982
C+GCK I TLC HC REAE+Y + +V E +F +LWTQCQ CQGS HQD+
Sbjct: 478 CLGCKTPIPETEKSTLCVHCAPREAEIYTQKALEVAGHEGVFAKLWTQCQRCQGSFHQDI 537
Query: 983 LCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
LC++RDCPIFY+RKK QKD+A+A+ LDR+ F
Sbjct: 538 LCSNRDCPIFYKRKKVQKDLADAQDALDRFAF 569
>gi|71412800|ref|XP_808567.1| DNA polymerase delta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70872801|gb|EAN86716.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi]
Length = 1029
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/626 (59%), Positives = 481/626 (76%), Gaps = 22/626 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQ G+ ETRRRLAVYCLKDA LP +LL++LM + N VEMARVTGVPI
Sbjct: 409 QKEDVHHSIIADLQQGSEETRRRLAVYCLKDALLPVKLLERLMVVVNNVEMARVTGVPIE 468
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGS--EQGTYEGATVLEARAGFYEKPIAT 517
+LL RGQ IKV S +LRKAK K+L++P V+ +G +Q YEGATV+E GFY PI T
Sbjct: 469 WLLERGQQIKVFSMMLRKAKAKDLLVPAVEYSGGGGDQRGYEGATVIEPLKGFYNCPIVT 528
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
LDFASLYPSI++A+NLCYSTLV P D + P E +++TP+G+TFVK L GILPE+L
Sbjct: 529 LDFASLYPSIIIAHNLCYSTLVRPSDI--VRYPAEMLSRTPTGDTFVKKELFPGILPEVL 586
Query: 578 EELLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
++LLAARKRAK+ +K+ + LE VL+GRQLALKISANSVYGFTGA VG+LPC+E+SSS
Sbjct: 587 QDLLAARKRAKSLMKDVPMESLEYKVLNGRQLALKISANSVYGFTGAQVGKLPCLEVSSS 646
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGV-------PTVEAAM 689
VT+YGR MI+ TK LVE + V +V+YGDTDSVM++ +E AM
Sbjct: 647 VTAYGRLMIDQTKFLVESLYPGV-------KVVYGDTDSVMIKCLTDEKGTEKERLEYAM 699
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
G+ AA+ +S F+ PIKLEFEKVY+PYLL++KKRYAGL WTN E++DK+D KGIETVR
Sbjct: 700 TFGKGAAEEVSSHFLNPIKLEFEKVYFPYLLMNKKRYAGLLWTNTERYDKLDAKGIETVR 759
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RDNC LV ++++ L++IL+ R + AV++VK TI DLL+NR+D+S LVITK +K ++
Sbjct: 760 RDNCPLVASVISGVLNRILIQRSVDSAVEFVKGTIRDLLLNRLDISHLVITKTFSKAENE 819
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPID 869
Y AHV L ERMRKRD A+APN+GDRV YVI++AAKGAKAYERSEDPIYVLENNIPID
Sbjct: 820 YAGAQAHVALVERMRKRDPASAPNIGDRVAYVIVRAAKGAKAYERSEDPIYVLENNIPID 879
Query: 870 THYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GIMKFAKRQLSCI 927
T YYLE+Q++ PLLR+FE +L + S L+ GDHTR I +S PS + G+MKF K QL CI
Sbjct: 880 TQYYLEHQLAPPLLRVFEGVLDDPSV-LIKGDHTRHILVSAPSKNAGGLMKFVKIQLQCI 938
Query: 928 GCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSR 987
C+A+I G LC +C+ +EA++Y K V++ E ++ ++WTQCQ+CQGSL+Q+V+CTS+
Sbjct: 939 SCRAIIKEGALCDNCRHKEADVYGKIVAKRNHYEAIYSQVWTQCQQCQGSLNQEVICTSK 998
Query: 988 DCPIFYRRKKAQKDMAEAKLQLDRWN 1013
DCP+FY RKK QKD+ E + LDR+
Sbjct: 999 DCPVFYMRKKVQKDVKEQQTLLDRFG 1024
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 198/338 (58%), Gaps = 14/338 (4%)
Query: 72 LAKWA---RPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTRE 128
+++W RP L Y+ + ++FQ LD G ++ + + ++R++GVT+E
Sbjct: 1 MSQWESLYRPHLPPEYLQR--DLLFQLLDCCQTKGSAHPTVSRVRHAENPVVRLYGVTKE 58
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQFVRHIEMVQ 187
GHSV + +EPY +I P+G P + Q+L+ + + + + + IE+ +
Sbjct: 59 GHSVLVHCYNYEPYLWIKAPKGWLPA----YSQLLKAELNAQLDSLTHASDTIVRIEVHK 114
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL-DRGIQLDGL--GMKSFMTYESNVLFA 244
++SIMYYQ + LKIVV LP + R +L DRG+ G G++ F TYESNV+F
Sbjct: 115 RQSIMYYQGEGLTEHLKIVVQLPQHIPRLRTLLSDRGVACAGAWDGVRVFPTYESNVIFP 174
Query: 245 LRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
LRF++D I G NW+ +PVG + + S CQ+E C + + + G++ +APFRI
Sbjct: 175 LRFIVDNGISGCNWLTIPVGSFCTATERTSTCQIELCCSHEAVQNHDAVGQYLSIAPFRI 234
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVAN-LVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSF 363
LS DIEC G+KG FP+P DPVIQ+AN + E +P R + TLKSC PI G V S+
Sbjct: 235 LSIDIECQGKKGLFPDPEEDPVIQIANHCINYGNEAEPLTRTIFTLKSCGPIAGARVCSY 294
Query: 364 ETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
ETE ++LL W F++ +DPD+ GYNI FD PYL+ +
Sbjct: 295 ETEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNR 332
>gi|407862999|gb|EKG07818.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi]
Length = 1029
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/626 (59%), Positives = 481/626 (76%), Gaps = 22/626 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQ G+ ETRRRLAVYCLKDA LP +LL++LM + N VEMARVTGVPI
Sbjct: 409 QKEDVHHSIIADLQQGSEETRRRLAVYCLKDALLPVKLLERLMVVVNNVEMARVTGVPIE 468
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGS--EQGTYEGATVLEARAGFYEKPIAT 517
+LL RGQ IKV S +LRKAK K+L++P V+ +G +Q YEGATV+E GFY PI T
Sbjct: 469 WLLERGQQIKVFSMMLRKAKVKDLLVPAVEYSGGGGDQRGYEGATVIEPLKGFYNCPIVT 528
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
LDFASLYPSI++A+NLCYSTLV P D + P E +++TP+G+TFVK L GILPE+L
Sbjct: 529 LDFASLYPSIIIAHNLCYSTLVRPSDI--VRYPAEMLSRTPTGDTFVKKELFPGILPEVL 586
Query: 578 EELLAARKRAKADLKEA-KDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
++LLAARKRAK+ +K+ + LE VL+GRQLALKISANSVYGFTGA VG+LPC+E+SSS
Sbjct: 587 QDLLAARKRAKSLMKDVPMESLEYKVLNGRQLALKISANSVYGFTGAQVGKLPCLEVSSS 646
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGV-------PTVEAAM 689
VT+YGR MI+ TK LVE + V +V+YGDTDSVM++ +E AM
Sbjct: 647 VTAYGRLMIDQTKFLVESLYPGV-------KVVYGDTDSVMIKCLTDEKGTEKERLEYAM 699
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
G+ AA+ +S F+ PIKLEFEKVY+PYLL++KKRYAGL WTN E++DK+D KGIETVR
Sbjct: 700 TFGKGAAEEVSSHFLNPIKLEFEKVYFPYLLMNKKRYAGLLWTNTERYDKLDAKGIETVR 759
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RDNC LV ++++ L++IL+ R + AV++VK TI DLL+NR+D+S LVITK +K ++
Sbjct: 760 RDNCPLVASVISGVLNRILIQRSVDSAVEFVKGTIRDLLLNRLDISHLVITKTFSKAENE 819
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPID 869
Y AHV L ERMRKRD A+APN+GDRV YVI++AAKGAKAYERSEDPIYVLENNIPID
Sbjct: 820 YAGAQAHVALVERMRKRDPASAPNIGDRVAYVIVRAAKGAKAYERSEDPIYVLENNIPID 879
Query: 870 THYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GIMKFAKRQLSCI 927
T YYLE+Q++ PLLR+FE +L + S L+ GDHTR I +S PS + G+MKF K QL CI
Sbjct: 880 TQYYLEHQLAPPLLRVFEGVLDDPSV-LIKGDHTRHILVSAPSKNAGGLMKFVKIQLQCI 938
Query: 928 GCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSR 987
C+A+I G LC +C+ +EA++Y K V++ E ++ ++WTQCQ+CQGSL+Q+V+CTS+
Sbjct: 939 SCRAIIKEGALCDNCRHKEADVYGKIVAKRNHYEAIYSQVWTQCQQCQGSLNQEVICTSK 998
Query: 988 DCPIFYRRKKAQKDMAEAKLQLDRWN 1013
DCP+FY RKK QKD+ E + LDR+
Sbjct: 999 DCPVFYMRKKVQKDVKEQQTLLDRFG 1024
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 198/338 (58%), Gaps = 14/338 (4%)
Query: 72 LAKWA---RPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTRE 128
+++W RP L Y+ + ++FQ LD G ++ + + ++R++GVT+E
Sbjct: 1 MSQWESLYRPQLPPEYLQR--DLLFQLLDCCQTKGSAHPTVSRVRHAENPVVRLYGVTKE 58
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQFVRHIEMVQ 187
GHSV + +EPY +I P+G P + Q+L+ + + + + V IE+ +
Sbjct: 59 GHSVLVHCYNYEPYLWIKAPKGWLPA----YSQLLKAELNAQLDSLTHASDTVVRIEVHK 114
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL-DRGIQLDGL--GMKSFMTYESNVLFA 244
++SIMYYQ + LKIVV LP + R +L DRG+ G G++ F TYESNV+F
Sbjct: 115 RQSIMYYQGEGLTEHLKIVVQLPQHIPRLRTLLSDRGVACAGAWDGVRVFPTYESNVIFP 174
Query: 245 LRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
LRF++D I G NW+ +PVG + + S CQ+E C + + + G++ +APFRI
Sbjct: 175 LRFIVDNGISGCNWLTIPVGSFCTATERTSTCQIELCCSHEAVQNHDAVGQYLSIAPFRI 234
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVAN-LVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSF 363
LS DIEC G+KG FP+P DPVIQ+AN + E +P R + TLKSC PI G V S+
Sbjct: 235 LSIDIECQGKKGLFPDPEEDPVIQIANHCINYGNEAEPLTRTIFTLKSCGPIAGARVCSY 294
Query: 364 ETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
ETE ++LL W F++ +DPD+ GYNI FD PYL+ +
Sbjct: 295 ETEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNR 332
>gi|326473539|gb|EGD97548.1| DNA polymerase family B [Trichophyton tonsurans CBS 112818]
Length = 1085
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/621 (60%), Positives = 469/621 (75%), Gaps = 35/621 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 487 QKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 546
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL+RGQ IK +SQL RKA ++ LVIP++K + YEGATV+E +Y PIATLD
Sbjct: 547 FLLARGQQIKFISQLFRKALEQKLVIPDLKNDDNSNQQYEGATVIEPVRDYYPVPIATLD 606
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KL L E TP+ + F + ++KG+L +ILE
Sbjct: 607 FASLYPSIIQAHNLCYTTLLNKRTVEKLGLEKDEDYIVTPNDDMFCTAKVRKGLLSQILE 666
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARKRAK +L KDP +KAVL+GRQLALKISANSVYG TGAT G+LPC+ I+SS T
Sbjct: 667 ELLTARKRAKRELAVEKDPFKKAVLNGRQLALKISANSVYGITGATNGKLPCLAIASSTT 726
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK VE ++T GY H+A+VIYGDTDSVMV+FG + AMKLG EAA +
Sbjct: 727 SYGRQMIEKTKDEVEARYTISNGYSHDAKVIYGDTDSVMVKFGTTDLAEAMKLGEEAAGF 786
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F+KPIKLEFEKVYYPYLLI+KKRYAGLYWTNP K+DKMDTKGIETVRRDNCLLV+
Sbjct: 787 VSSKFMKPIKLEFEKVYYPYLLINKKRYAGLYWTNPVKYDKMDTKGIETVRRDNCLLVQT 846
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L+KIL+DR++ GA YVK+ ISDLL N++D+S LVITK LTK ++Y K AHVE
Sbjct: 847 VIETVLNKILIDRNVNGAETYVKNIISDLLQNKVDMSKLVITKALTK--EEYTGKQAHVE 904
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L ER AK YE+SEDPIYVLENNIPIDT YYLENQ+
Sbjct: 905 LVER--------------------------AKNYEKSEDPIYVLENNIPIDTRYYLENQL 938
Query: 879 SKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---- 933
+KPL RIFEPIL + + +LL GDHTRSI+++ P+ G+MKFAK+ +C+GCK +
Sbjct: 939 AKPLTRIFEPILGEKKAAQLLKGDHTRSITVAAPTLGGLMKFAKKTQTCMGCKKPLVGKE 998
Query: 934 -SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+G +CS+C+ R ELY +T+++V ELEV FGRLWTQCQ CQGSLH +V+C+SRDCPIF
Sbjct: 999 EMSGAVCSNCRPRLGELYTRTLNKVSELEVRFGRLWTQCQRCQGSLHGEVICSSRDCPIF 1058
Query: 993 YRRKKAQKDMAEAKLQLDRWN 1013
Y R KA+KD+ +++ +L R++
Sbjct: 1059 YMRMKAKKDVEDSEKELARFD 1079
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 206/356 (57%), Gaps = 24/356 (6%)
Query: 52 EDEESLILRDI-EQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL 110
ED + +DI + +++ A + KW RPPL G+ S+ FQQ+D+ E
Sbjct: 74 EDVLEKLTQDIGDLKENNAEKDQKWERPPLD-GFNPSRDSLCFQQIDV---------EEG 123
Query: 111 PLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA 170
L+ G+A +++FGVT G+SV V GF Y YI+ P D F LE
Sbjct: 124 YLAGGTA--VKLFGVTENGNSVLLHVTGFMHYLYIAAPVAFTQADCVPFKAYLE------ 175
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG-ILDRGIQLDGL 229
N+ S + ++M + ++ +Q + P+LKI V P + + R I+ G+
Sbjct: 176 NQLSVTEPVIHSVQMTMRENLYEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGM 235
Query: 230 --GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYS 285
G++ + N+ + LRFMID I G +W+EVP KY + S CQ+E Y
Sbjct: 236 WKGIEGEILTFDNIQYLLRFMIDTGISGMSWVEVPAAKYEVLPPGQCQSNCQIEASVHYR 295
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRN 345
D+I+ +GE++KMAP RILSFDIECAGRKG FPEP DPVIQ+AN+VT GE +PF+RN
Sbjct: 296 DMIAHPNDGEWAKMAPLRILSFDIECAGRKGIFPEPNIDPVIQIANIVTRYGESKPFVRN 355
Query: 346 VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V + +C+ IV V+ F+ E ++L+AWRDF+ +VDPDV+IGYNI FD PYL+++
Sbjct: 356 VFVMDTCSSIVNTQVLEFDKEENMLMAWRDFVEKVDPDVIIGYNIANFDFPYLLDR 411
>gi|324120722|dbj|BAJ78752.1| DNA polymerase delta catalytic subunit [Forficula hiromasai]
Length = 1120
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/616 (62%), Positives = 474/616 (76%), Gaps = 9/616 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIIS+LQNGNA+TRRRLA+YCLKDA LP RLLDKLM NY+EM+RVTGV +S
Sbjct: 506 QKEDVHHSIISELQNGNAQTRRRLAIYCLKDALLPLRLLDKLMSFINYMEMSRVTGVSLS 565
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIP-NVKQAGSEQGTYEGATVLEARAGFYEKPIATL 518
LL+RGQ +KV+SQLLR ++ + ++P + AG EQ +EGATV+E R G+Y PIATL
Sbjct: 566 SLLTRGQQVKVVSQLLRHSRARGYLMPAHTXSAGDEQ--FEGATVIEPRRGYYPHPIATL 623
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DF+SLYPSIMMA+NLCY+TLV P ++ +P + + TP+ FVK++++KG+LPEILE
Sbjct: 624 DFSSLYPSIMMAHNLCYTTLVPPN--KRNIVPADQLTHTPANNLFVKASVRKGLLPEILE 681
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+LLAARK+AKADLK DP +K VLDGRQLALKISANSVYGFTGA VG+LPC+EISSSVT
Sbjct: 682 DLLAARKQAKADLKNETDPFKKQVLDGRQLALKISANSVYGFTGAQVGRLPCLEISSSVT 741
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK+ VE+K+ GY+H++ VIYGDTDSVMV FGV + AM+LG+EAADY
Sbjct: 742 AYGRQMIESTKQEVENKYNVSNGYDHDSMVIYGDTDSVMVNFGVKDIAEAMRLGKEAADY 801
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S FI PIKLEFEKVYYPYLLI+KKRYAGLY+T P+K DKMD KGIETVRRD+C LV +
Sbjct: 802 VSAKFINPIKLEFEKVYYPYLLINKKRYAGLYFTRPDKHDKMDCKGIETVRRDSCPLVAS 861
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L K+L+DRD GAV+YVK I+ LL N++D+S LV+TK L K DY K AHVE
Sbjct: 862 VMNTSLEKLLIDRDPDGAVEYVKYIIAQLLCNKIDISKLVVTKELAKV--DYAGKQAHVE 919
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA +MRKRDA TAP +GDRVPYV I K AY + EDPIYVLENNIPID YYL+NQ+
Sbjct: 920 LANKMRKRDAGTAPKLGDRVPYVFIAGPKNTPAYMKVEDPIYVLENNIPIDFSYYLDNQL 979
Query: 879 SKPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-SNG 936
SKPLLRIFEPIL + A LL GDHTR+ ++ T + F +R+ +C+GCK ++ + G
Sbjct: 980 SKPLLRIFEPILGDRAESILLKGDHTRTKTLQTSRVGALSAFTQRKETCLGCKTVLNTTG 1039
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC C E Y K ++ +LE F RLWTQCQ CQGSLH++V+CT+RDCPIFY RK
Sbjct: 1040 ALCKFCLPNEDSYYLKEQEKLNQLETQFSRLWTQCQNCQGSLHEEVICTNRDCPIFYLRK 1099
Query: 997 KAQKDMAEAKLQLDRW 1012
K Q D+ + + R+
Sbjct: 1100 KIQLDLTTHEKTIQRF 1115
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 139/330 (42%), Positives = 214/330 (64%), Gaps = 4/330 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+W+RPP + + I+FQQ+DID+ IG ++ +G ++R++GVT+EG+S+C
Sbjct: 103 QWSRPPPPT-LNHKTDPIIFQQIDIDHYIGTHLPDMPGAQTGPVPVMRLYGVTQEGNSIC 161
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANR--NSKVPQFVRHIEMVQKRSI 191
C HGF PYFY+S P+ D F + L+ + R N+KV + +E+V+++++
Sbjct: 162 CHAHGFAPYFYVSAPEKFTDKDCLPFMEALDKVVIADIRYNNNKVEHAILSVEIVERQTM 221
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y + FL++ VALPT++A+C+ ++++ + + + +E+N+ F +RFM+D
Sbjct: 222 WTYTGPEKDKFLRVTVALPTLIAACKRLIEKQ-DIYPVHQHRYRFFETNIEFDIRFMVDS 280
Query: 252 NIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC 311
I G WI +P +R + CQLE D + +I+ PEGE+SK+APFRILSFDIEC
Sbjct: 281 EISGCCWITLPAQAWRPRINPTTRCQLECDIAWDKLIAHTPEGEWSKVAPFRILSFDIEC 340
Query: 312 AGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLL 371
AGRKG FPEP HDPVIQ+A++V QG+++PFIRNV TL +CA I+ V SF+ E ++L
Sbjct: 341 AGRKGIFPEPEHDPVIQIASMVQEQGQREPFIRNVFTLNTCATILHSQVFSFQKESELLN 400
Query: 372 AWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
W F+R VDPD++ GYNI FDLPY++ +
Sbjct: 401 EWASFVRLVDPDIITGYNINNFDLPYILNR 430
>gi|219121567|ref|XP_002181135.1| DNA polymerase delta [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407121|gb|EEC47058.1| DNA polymerase delta [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1087
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/630 (59%), Positives = 466/630 (73%), Gaps = 19/630 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNG+ E R RLAVYCLKDA LPQRL+DKL + NY+EMARVTGVP+S
Sbjct: 458 QKEDVHHSIISDLQNGSDEDRHRLAVYCLKDALLPQRLMDKLSVLVNYIEMARVTGVPMS 517
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT--YEGATVLEARAGFYEKPIAT 517
FL+SRGQ IKV S +LRK + + L++P ++++G+ YEGATVL+ +YE PIAT
Sbjct: 518 FLISRGQQIKVFSMILRKCRHEKLLVPTLRKSGNANADVGYEGATVLDPIKNYYEVPIAT 577
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
LDFASLYPSIM AYNLCYSTLV P D KL+ P+ K+ +G FV S+++KGILP IL
Sbjct: 578 LDFASLYPSIMQAYNLCYSTLVNPADVGKLD--PDIYRKSENGNVFVHSSVKKGILPTIL 635
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
EELL+ARKRAK D+K A ++AV +GRQLALK+SANSVYGFTGATVGQLPC+ I+SSV
Sbjct: 636 EELLSARKRAKKDMKNAPTDFDRAVQNGRQLALKVSANSVYGFTGATVGQLPCLPIASSV 695
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TSYGRQ++E TK VE+K+T GY+H+A+V+YGDTDSVMV+FG TV L EAA+
Sbjct: 696 TSYGRQLLEKTKTFVEEKYTKSNGYDHDAQVVYGDTDSVMVKFGPATVAETFPLAIEAAE 755
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
S F PI LEFEKVY+PYLL++KKRYAGL WT EK+DK+DTKG+E VRRDNC LV+
Sbjct: 756 KASEIFPSPILLEFEKVYFPYLLMNKKRYAGLMWTEIEKYDKLDTKGLEVVRRDNCQLVR 815
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTG---------- 807
++ L+KIL+D+++ GA++YVKS ISDLL N+MD+S LVITK L K
Sbjct: 816 EVIQTSLNKILIDQNVQGAIEYVKSQISDLLQNKMDISRLVITKSLNKGAEYALGLGGKK 875
Query: 808 DDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP 867
DDY+VK AHVELA RM+KRDA +AP +GDRVPY+II AKGA +E++EDPIYVLENN+P
Sbjct: 876 DDYKVKQAHVELAARMKKRDAGSAPQLGDRVPYIIITGAKGAANFEKAEDPIYVLENNLP 935
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPS--NSGIMKFAKRQLS 925
ID +YL NQ+SKPL RIFEPI+ + K LL GDHTR I I TPS +M FAK+
Sbjct: 936 IDCKWYLTNQLSKPLTRIFEPIISDVDKSLLQGDHTRKIFIPTPSARKGSLMMFAKKVAQ 995
Query: 926 CIGCKALISN--GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVL 983
CIGCKA + G LC HC RE +Y + + ++E E+ + LW Q G++H D++
Sbjct: 996 CIGCKASVDGKKGYLCKHCVNREDAIYLEKLEILREAELRYNDLWAAAQRIHGTVHSDII 1055
Query: 984 CTSRDCPI-FYRRKKAQKDMAEAKLQLDRW 1012
CT C FYRRKK Q D+ A+ LD++
Sbjct: 1056 CTGDGCSCQFYRRKKVQADIRLAQDVLDKF 1085
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 191/347 (55%), Gaps = 31/347 (8%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+W R L +Q + Q LD+D V S G I+R FGV GHS+
Sbjct: 43 RWKRARLPDDLSNQT-DLNLQWLDMDVV-----------SEGQVPILRGFGVDERGHSIA 90
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMV------Q 187
VHGF PY Y + G +++ I + ++ H E++
Sbjct: 91 VFVHGFTPYAYFALENGYELTNLAELSAIRQTLTARLAAAARG-GTATHAEVLGIEYITD 149
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK---------SFMTYE 238
+SIM Y+ ++ FLKI V+LP +V + + I++ GI L G+ ++ +E
Sbjct: 150 HKSIMGYETPHTK-FLKIYVSLPGLVPTLKRIMEDGIDLPGITRTGGTSTGLPPTYAAFE 208
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEF 296
+NV F LRFM+D + G W+ +P Y R+ + ++CQ+E D Y DI R EGE+
Sbjct: 209 ANVPFVLRFMVDRKLSGAGWLTLPSDTYQIREIPRKETHCQIEVDISYDDITPRPSEGEW 268
Query: 297 SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
+K+AP RILS DIEC GRKGHFPE DPVIQ+AN ++L G+ +P ++NV TLK C PIV
Sbjct: 269 NKIAPLRILSVDIECQGRKGHFPEAEKDPVIQIANTISLYGQDKPIVQNVFTLKGCLPIV 328
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
G V+ + E D+L+ WR F+ DPD++ GYN+ FD+PYL+++ D
Sbjct: 329 GAQVICSDEEEDMLMKWRAFLEAADPDIITGYNVQNFDIPYLLDRAD 375
>gi|195997435|ref|XP_002108586.1| hypothetical protein TRIADDRAFT_18979 [Trichoplax adhaerens]
gi|190589362|gb|EDV29384.1| hypothetical protein TRIADDRAFT_18979 [Trichoplax adhaerens]
Length = 1050
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/617 (60%), Positives = 480/617 (77%), Gaps = 9/617 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KE + S+I+DL GN +RRRLA+YCLK+A LP +LLDKLM I NY+EMARVTGVP+
Sbjct: 434 QKELLQPSVIADLLRGNDRSRRRLAIYCLKNASLPIKLLDKLMCIINYMEMARVTGVPLG 493
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
LL+RGQ IKV+SQLLR AK++ +++P K +AG + Y GA V+E G+Y+ PIATL
Sbjct: 494 CLLTRGQQIKVVSQLLRYAKEEKMLMPAHKAEAGDD---YTGAIVIEPVRGYYDCPIATL 550
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DF+SLYPSIM A+NLCY+TL+ + NL P+ KTPSG FVK NL+ GILP+IL+
Sbjct: 551 DFSSLYPSIMQAHNLCYTTLL--QHHHLSNLSPDDYIKTPSGNYFVKKNLRAGILPKILQ 608
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL+ARK+AK DLK KDP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+E+S SVT
Sbjct: 609 NLLSARKKAKFDLKNEKDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEVSQSVT 668
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GRQMIE +++LVE+++T GY+ +A+VIYGDTDSVMV+FG+ TVE +M+LG+EAA+Y
Sbjct: 669 AFGRQMIEKSRQLVEERYTIKNGYKFDAQVIYGDTDSVMVKFGLDTVEESMELGKEAANY 728
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
IS F PIKLEFEKVY+PYLLI+KKRYAGLY+T + +DK+D KGIETVRRDNC LV N
Sbjct: 729 ISSHFPSPIKLEFEKVYFPYLLINKKRYAGLYFTKADTYDKVDCKGIETVRRDNCPLVAN 788
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL K+LVDR+ A+++V+ TISDLL NR+D+S L+ITK LT++ D+Y K AHVE
Sbjct: 789 LINACLQKLLVDRNPDSAIKHVQQTISDLLCNRIDISQLIITKELTRSDDEYAGKQAHVE 848
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA +MRKRD ++ P +GDRVPYVII A+GA AY RSEDP+Y LEN+I IDT YYLENQ+
Sbjct: 849 LAAKMRKRDPSSCPTLGDRVPYVIITGARGAAAYTRSEDPVYALENSIAIDTTYYLENQL 908
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI-SN 935
SKPLLRIFEPIL E LL GDHT + ++ T S + F K++ +C+GCKA++ N
Sbjct: 909 SKPLLRIFEPILGENKAESILLKGDHTLTKTVVTSSLGRLSAFVKKRETCMGCKAVLDDN 968
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C HC+ RE+E++ + ++ + E E F +LWTQCQ CQGSL ++VLCTSRDCP+FY R
Sbjct: 969 SAVCKHCRHRESEIFQREMNHLSEHENRFAKLWTQCQRCQGSLCEEVLCTSRDCPVFYMR 1028
Query: 996 KKAQKDMAEAKLQLDRW 1012
KK QKD+ E + + R+
Sbjct: 1029 KKVQKDLKEQEKLITRF 1045
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 200/347 (57%), Gaps = 21/347 (6%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+WARP L+S V++ +I+FQQLD+DY +G + ++G IIR+FGVT+E H+V
Sbjct: 14 RWARPRLNSIDVNK-DAIIFQQLDMDYYLGSPVPGMPGAATGPVPIIRMFGVTKEQHTVI 72
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS------KVPQFVRHIEMVQ 187
C +HGF PYFY+ P ++ Q+ + + + N KV Q + +E+V
Sbjct: 73 CHIHGFAPYFYVEVPPTCRQSEMREECQLFQDDLNKTVLNDFKSNKEKVSQAILAVEVVA 132
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRF 247
SI Y + + PF KI VA P ++ + + +L+ G + + TYESN+ F +RF
Sbjct: 133 YCSIYGYHENRQTPFFKITVATPRVLQTTKRLLEIGFSYSSHPVCCYQTYESNIDFEIRF 192
Query: 248 MIDCNIVGGNWIEVPVGKY-------------RKTAKTLSYCQLEFDCLYSDIISRHPEG 294
M+D N+VG NWIE+P KY + + S CQ+E D + IS E
Sbjct: 193 MVDANVVGCNWIELPATKYMIRGDHAPGWNNAQSSLNRTSRCQIEADIAWDQFISYPAED 252
Query: 295 EFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP 354
E+ +AP R+LSFDI C+ +G P+P D VIQ+A +V QG+ +PFI+N+ T +S A
Sbjct: 253 EWQAVAPLRLLSFDIMCSTSRGT-PDPDKDSVIQIAAVVIRQGDYEPFIKNIFTTQSSAN 311
Query: 355 IVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
IVG + +F E+++L AW +F EVDPD++ GYN+ LPYL+ +
Sbjct: 312 IVGCQLHTFSKEKEMLKAWHEFFLEVDPDIITGYNVVNSSLPYLLNR 358
>gi|403343190|gb|EJY70918.1| DNA polymerase [Oxytricha trifallax]
Length = 1071
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/624 (60%), Positives = 467/624 (74%), Gaps = 22/624 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H+IISDLQNG TRRRLAVYCLKDAYLP RL++KLM +FN EM+RVTGVPIS
Sbjct: 440 QKEDVPHTIISDLQNGTEYTRRRLAVYCLKDAYLPLRLMEKLMCLFNLTEMSRVTGVPIS 499
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FL +RGQ IKV SQL RKAK+ +L+IP K A E G YEGA V+E GFY P+ATLD
Sbjct: 500 FLFTRGQQIKVASQLYRKAKEYDLIIPVDKTAAME-GKYEGAVVIEPTRGFYTDPVATLD 558
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMA+NLCYS+L+ + K P E KTP+G+ F+K +++KG+LP ILEE
Sbjct: 559 FASLYPSIMMAHNLCYSSLIPAHEIGKH--PLENYIKTPNGDYFMKQSVKKGLLPMILEE 616
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRA+ +L + DP +KAVLDGRQLALKISANSVYGFTGA VGQLPC+ ISSSVTS
Sbjct: 617 LLAARKRARQELAKTTDPFQKAVLDGRQLALKISANSVYGFTGAQVGQLPCLAISSSVTS 676
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR+MIE T+ V K+ GYE +++VIYGDTDSVMV+FGV +++ AMKLG+EAA+Y+
Sbjct: 677 YGREMIEATRAYVLQKYNKENGYEFDSQVIYGDTDSVMVKFGVKSIQEAMKLGQEAANYV 736
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ F +PIKLEFEKVY PYLL++KKRYAGL WT PEKFDKMD KGIETVRRDNC +VK
Sbjct: 737 TQFFQQPIKLEFEKVYCPYLLMNKKRYAGLLWTKPEKFDKMDCKGIETVRRDNCGIVKEA 796
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTK-------------- 805
V L+ +L+++D A+ Y K +SDLL NR+DLSLLVITKGL K
Sbjct: 797 VQSALNMLLIEQDAEKALDYCKGIVSDLLQNRIDLSLLVITKGLGKKTAKPETDANKPQG 856
Query: 806 -TGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN 864
Y K AHVELAERMRKRD A+AP+ GDRV YV++K AKG+K YE+SEDP+YVL++
Sbjct: 857 SANGQYHGKQAHVELAERMRKRDEASAPSQGDRVAYVMVKGAKGSKGYEKSEDPLYVLQH 916
Query: 865 NIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS-GIMKFAKRQ 923
N+PID +YL++QI PLLR+FEPI K+A K L SG+HTRSI + S S G+ KF
Sbjct: 917 NLPIDFQFYLDHQIKLPLLRLFEPIYKDAEKMLFSGEHTRSIFVPKVSASQGLGKFTVAS 976
Query: 924 LSCIGCKALI---SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQ 980
C+GCK ++ +C++CK ++ ++Y + + E + LW QCQ CQGSLH+
Sbjct: 977 RQCLGCKTVLPKSEQDCVCNNCKPKKKQIYIERKQESNLYEKAYADLWVQCQRCQGSLHE 1036
Query: 981 DVLCTSRDCPIFYRRKKAQKDMAE 1004
D+LC+SRDCPIFYRR KA+K++ E
Sbjct: 1037 DILCSSRDCPIFYRRLKAKKNLEE 1060
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 197/339 (58%), Gaps = 18/339 (5%)
Query: 77 RPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKV 136
RPP + S SI F Q+D+DY + + +IR+FG+T+ G+SV V
Sbjct: 40 RPPCPT-INSDEMSIEFMQIDVDYYTDFTPEYVKRPDQNETCVIRMFGITQAGNSVVAHV 98
Query: 137 HGFEPYFYISC-----PQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSI 191
H F PYFY+ Q + P D+ L N +K + +R IE+ QK S+
Sbjct: 99 HNFTPYFYVEVDTRKLAQPLTPQDLMSIKSDL-------NNWNKGQECIRSIELTQKSSV 151
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMID 250
M+YQ++K+ FLKI LP V R + + G +T+ESN+ +ALRFMID
Sbjct: 152 MHYQEKKNT-FLKIYTTLPKYVNQLRSVFENGSYSYKSQHCFQHVTFESNLPYALRFMID 210
Query: 251 CNIVGGNWIEVPVGKYRKTAKTL--SYCQLEFDCLYSDIISRHP-EGEFSKMAPFRILSF 307
+VG +WI+V G Y + L S Q+E D + + P EG++S +AP RILSF
Sbjct: 211 NEVVGMSWIKVNAGNYAVRPRNLRKSNAQIEIDVENFNHVECLPCEGDYSNIAPLRILSF 270
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIEC+ KG FP+P DP+IQ+AN+V + GEK+PF+RNV TLK CAPIVG V S++ E
Sbjct: 271 DIECSADKGRFPQPQLDPIIQIANIVKIHGEKEPFVRNVFTLKECAPIVGSQVSSYQREE 330
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHH 406
++L AW+DF+ EVDPD++ GYNI FD PY+I + H
Sbjct: 331 EMLRAWKDFLVEVDPDIITGYNIVNFDFPYIINRAIALH 369
>gi|324120758|dbj|BAJ78770.1| DNA polymerase delta catalytic subunit [Eretes sticticus]
Length = 998
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/619 (59%), Positives = 479/619 (77%), Gaps = 9/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SII+DLQNG+ +TRRRLAVYC+KDA LP RLL+ + N +EMARVTGVP++
Sbjct: 382 QKEDVHYSIITDLQNGDEQTRRRLAVYCVKDADLPLRLLNHVKSFTNDIEMARVTGVPLT 441
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
LL++G+ +KV++QLLR A+ N +P V+ QA SEQ +YEGATV+E G+Y PIATL
Sbjct: 442 SLLTKGEQVKVVAQLLRHARAHNYFMPAVQGQANSEQ-SYEGATVIEPVRGYYTDPIATL 500
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DF+SLYPSIM+A+NLCY+TL+ KL L + + +TP+G FVKS +++G+LP+IL+
Sbjct: 501 DFSSLYPSIMIAHNLCYTTLINKVTKDKLGLTNDQITETPAGHLFVKSTVREGLLPQILQ 560
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL+ARKR KA+LK A DP+ ++VLDG+QLALKISANSVYGFTGATVG+LPC+EIS SVT
Sbjct: 561 SLLSARKRTKAELKNATDPVIRSVLDGKQLALKISANSVYGFTGATVGKLPCLEISGSVT 620
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MIE TK+LVE + GYE +++VIYGDTDSVMV F V ++E +M+LGREAA+
Sbjct: 621 AYGRTMIEQTKQLVEQHYCLNNGYESDSKVIYGDTDSVMVNFKVQSLERSMELGREAAEL 680
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
IS FIKPIKLEFEKVYYPYLLI+KKRYAGLY+T +K+DKMD KGIETVRRDNCLLV N
Sbjct: 681 ISTNFIKPIKLEFEKVYYPYLLINKKRYAGLYYTKTDKYDKMDCKGIETVRRDNCLLVVN 740
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ CL K+L++RD GAVQ+ K I++LL N++D+S LVITK LTK DY K AHVE
Sbjct: 741 VINTCLQKLLINRDPDGAVQFAKQVIANLLRNQVDISQLVITKELTKA--DYAGKQAHVE 798
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L +++KRD AP VGDR+PYV + A K AY+++EDPIYVLENNIPIDT+YYLENQ+
Sbjct: 799 LMHKIQKRDPGNAPKVGDRIPYVFVAANKNVPAYQKAEDPIYVLENNIPIDTNYYLENQL 858
Query: 879 SKPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL----I 933
SKPL+RIFEPIL + ++ LL GDHTR+ +I T + F ++ +C+GCKA+ +
Sbjct: 859 SKPLVRIFEPILGDKAESILLRGDHTRTKTIVTSKVGALAAFTCKKETCLGCKAVLPKNL 918
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
N +C HCK +E+ LY + ++ +LE F L+TQCQ CQGSLH+++LCTSRDCPIFY
Sbjct: 919 ENSAVCPHCKPKESSLYQQELALHSQLEDKFAELFTQCQRCQGSLHEEILCTSRDCPIFY 978
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
R K Q D+ + ++ ++
Sbjct: 979 IRTKVQMDLETSSNKIKKF 997
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 182/299 (60%), Gaps = 11/299 (3%)
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF----HQILEGRMRE 169
+G I+R+FGVT EG+SVCC +HGF PYF++S P D F +++ MR
Sbjct: 13 TGPVPIMRMFGVTAEGNSVCCHIHGFSPYFFVSIPNNFKESDCQPFKIKLNELAIADMRS 72
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL 229
N + + V +E+V +S+ YQ ++ + F KI VAL + +C+ IL+ +
Sbjct: 73 NKIN--ISEAVLMVEIVSGQSLYQYQGEEERQFAKITVALHRFIPACKRILENQNVYPSI 130
Query: 230 GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGK-----YRKTAKTLSYCQLEFDCLY 284
G F ++ESNV +RFM+D ++G +WIE+P K Y T + + CQ+E D Y
Sbjct: 131 GHWDFSSFESNVDIEMRFMVDTQVLGCSWIEIPPNKWTIRDYFSTLQPTTLCQIEIDVAY 190
Query: 285 SDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIR 344
I+ PEG ++ +APF+ILSFDIECAGR+G FPEP DPVIQ+AN+V L G +
Sbjct: 191 DAFIAHAPEGAWAHVAPFKILSFDIECAGRRGIFPEPKIDPVIQIANVVRLHGADENLHV 250
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
NV TL SCAPI +V FETE ++L AW F+R++DPD+ GYNI FD PYL+ + +
Sbjct: 251 NVFTLNSCAPIGHAEVRCFETEYELLEAWGQFVRDIDPDLFTGYNINDFDFPYLLNRAE 309
>gi|270002921|gb|EEZ99368.1| DNA polymerase delta [Tribolium castaneum]
Length = 1050
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/618 (59%), Positives = 475/618 (76%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+S+I+DLQNG+ +TRRRLAVYCLKDA LP R+L + N VEMARVTGVPI+
Sbjct: 428 QKEDVHYSVITDLQNGDEQTRRRLAVYCLKDADLPVRILSTVRSFTNDVEMARVTGVPIT 487
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL++G+ +KV++QLL+ A+ +P + A S + YEGATV+E R G+Y PIATLD
Sbjct: 488 SLLTKGEQVKVVAQLLKHARAAGYFMPTHQGAPSSE-QYEGATVIEPRRGYYTDPIATLD 546
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIM+A+NLCY+TL+ P KL L E V TP+ FVKS+++ G+LP IL+
Sbjct: 547 FSSLYPSIMIAHNLCYTTLIKPSIKEKLCLSDEQVTTTPANCMFVKSSVRPGLLPHILQH 606
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+ KA+LKEA DP+ +AVLDGRQLA KISANSVYGFTGA VG+LPC+EISSSVT+
Sbjct: 607 LLAARKKTKAELKEATDPVVRAVLDGRQLAYKISANSVYGFTGAQVGKLPCLEISSSVTA 666
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE + GYE +A VIYGDTDSVMV F V ++E +M+LGREAAD I
Sbjct: 667 YGRTMIEQTKQEVEQHYRIENGYESDAMVIYGDTDSVMVNFRVKSLERSMELGREAADLI 726
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FIKPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDNC LV ++
Sbjct: 727 SAKFIKPIKLEFEKVYWPYLLINKKRYAGLYFTKPDKYDKMDCKGIETVRRDNCTLVVDV 786
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+D+D GAV Y K ISDLL N +D+S LVITK LTK +DY K AHVEL
Sbjct: 787 INSCLRKLLIDKDPDGAVNYAKKVISDLLQNNVDISQLVITKELTK--NDYAAKQAHVEL 844
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
+++M KRD AP +GDR+PYVII K +KA+E++EDPIYVLENNIPID+ YYL+NQ+S
Sbjct: 845 SKKMTKRDPGNAPKLGDRIPYVIIAGTKNSKAFEKAEDPIYVLENNIPIDSQYYLQNQLS 904
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
KPL+RIF+PIL ++++ LL G+HTR+ ++ T + F K++ +C+GC++++ G
Sbjct: 905 KPLIRIFQPILGDSAESILLRGEHTRTKTMVTSRVGALSAFTKKKETCLGCRSVLPAGYE 964
Query: 937 --TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+CSHCK +EA LY + + + LE F L+T+CQ CQGSLH+++LCTSRDCPIFY
Sbjct: 965 AEAVCSHCKPKEATLYQQELGHHRMLENRFSELFTECQRCQGSLHEEILCTSRDCPIFYI 1024
Query: 995 RKKAQKDMAEAKLQLDRW 1012
RKK Q ++ +K ++ R+
Sbjct: 1025 RKKVQMELDASKGKISRF 1042
Score = 288 bits (738), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 140/336 (41%), Positives = 209/336 (62%), Gaps = 7/336 (2%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
K RPP+ + +++FQ+L++D+ I + +G+ +IR+FG+T+ G+SVC
Sbjct: 21 KIFRPPVGDLNPTD-DALIFQELELDHYISAPYPGMPGAQTGTVPVIRMFGITKVGNSVC 79
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C +HGF PYFYI+ P D+S F + L + R+++ + + V +E+V+ +S+
Sbjct: 80 CHIHGFSPYFYINLPNDFTQADLSRFKEKLNEAVVSDMRSNRDNITEAVLMVELVRGKSL 139
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
+ YQ + F KI +ALP +A+ + +L + L +F +E+NV RFM+D
Sbjct: 140 VEYQGEDDNNFAKITLALPKFIAASKRLLSTTVVYQPLAHHTFHFFEANVDIETRFMVDT 199
Query: 252 NIVGGNWIEVPVGKYRKTAKT----LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
NI+G WIE+P GK+ K + S CQ+E D ++D IS PEGE+S +A FRI SF
Sbjct: 200 NILGCCWIELPAGKWFKRPENKFPVTSRCQIEVDISWTDFISHSPEGEWSPVARFRIHSF 259
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIECAGRKG FPEP DP+IQ+AN++ L G++ RN+ TL SCAPI +V SF+TE
Sbjct: 260 DIECAGRKGIFPEPNVDPIIQIANVIKLHGDEDVVTRNIFTLNSCAPIGHAEVRSFDTEA 319
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++L W +F+RE DPD+ GYNI FD PYLIE+ +
Sbjct: 320 EMLEEWAEFVRETDPDIFTGYNINNFDFPYLIERAN 355
>gi|189234183|ref|XP_967290.2| PREDICTED: similar to DNA polymerase delta catalytic subunit
[Tribolium castaneum]
Length = 1172
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/618 (59%), Positives = 475/618 (76%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+S+I+DLQNG+ +TRRRLAVYCLKDA LP R+L + N VEMARVTGVPI+
Sbjct: 428 QKEDVHYSVITDLQNGDEQTRRRLAVYCLKDADLPVRILSTVRSFTNDVEMARVTGVPIT 487
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL++G+ +KV++QLL+ A+ +P + A S + YEGATV+E R G+Y PIATLD
Sbjct: 488 SLLTKGEQVKVVAQLLKHARAAGYFMPTHQGAPSSE-QYEGATVIEPRRGYYTDPIATLD 546
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIM+A+NLCY+TL+ P KL L E V TP+ FVKS+++ G+LP IL+
Sbjct: 547 FSSLYPSIMIAHNLCYTTLIKPSIKEKLCLSDEQVTTTPANCMFVKSSVRPGLLPHILQH 606
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+ KA+LKEA DP+ +AVLDGRQLA KISANSVYGFTGA VG+LPC+EISSSVT+
Sbjct: 607 LLAARKKTKAELKEATDPVVRAVLDGRQLAYKISANSVYGFTGAQVGKLPCLEISSSVTA 666
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+ VE + GYE +A VIYGDTDSVMV F V ++E +M+LGREAAD I
Sbjct: 667 YGRTMIEQTKQEVEQHYRIENGYESDAMVIYGDTDSVMVNFRVKSLERSMELGREAADLI 726
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FIKPIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDNC LV ++
Sbjct: 727 SAKFIKPIKLEFEKVYWPYLLINKKRYAGLYFTKPDKYDKMDCKGIETVRRDNCTLVVDV 786
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+D+D GAV Y K ISDLL N +D+S LVITK LTK +DY K AHVEL
Sbjct: 787 INSCLRKLLIDKDPDGAVNYAKKVISDLLQNNVDISQLVITKELTK--NDYAAKQAHVEL 844
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
+++M KRD AP +GDR+PYVII K +KA+E++EDPIYVLENNIPID+ YYL+NQ+S
Sbjct: 845 SKKMTKRDPGNAPKLGDRIPYVIIAGTKNSKAFEKAEDPIYVLENNIPIDSQYYLQNQLS 904
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
KPL+RIF+PIL ++++ LL G+HTR+ ++ T + F K++ +C+GC++++ G
Sbjct: 905 KPLIRIFQPILGDSAESILLRGEHTRTKTMVTSRVGALSAFTKKKETCLGCRSVLPAGYE 964
Query: 937 --TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+CSHCK +EA LY + + + LE F L+T+CQ CQGSLH+++LCTSRDCPIFY
Sbjct: 965 AEAVCSHCKPKEATLYQQELGHHRMLENRFSELFTECQRCQGSLHEEILCTSRDCPIFYI 1024
Query: 995 RKKAQKDMAEAKLQLDRW 1012
RKK Q ++ +K ++ R+
Sbjct: 1025 RKKVQMELDASKGKISRF 1042
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/336 (41%), Positives = 209/336 (62%), Gaps = 7/336 (2%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
K RPP+ + +++FQ+L++D+ I + +G+ +IR+FG+T+ G+SVC
Sbjct: 21 KIFRPPVGDLNPTD-DALIFQELELDHYISAPYPGMPGAQTGTVPVIRMFGITKVGNSVC 79
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C +HGF PYFYI+ P D+S F + L + R+++ + + V +E+V+ +S+
Sbjct: 80 CHIHGFSPYFYINLPNDFTQADLSRFKEKLNEAVVSDMRSNRDNITEAVLMVELVRGKSL 139
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
+ YQ + F KI +ALP +A+ + +L + L +F +E+NV RFM+D
Sbjct: 140 VEYQGEDDNNFAKITLALPKFIAASKRLLSTTVVYQPLAHHTFHFFEANVDIETRFMVDT 199
Query: 252 NIVGGNWIEVPVGKYRKTAKT----LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
NI+G WIE+P GK+ K + S CQ+E D ++D IS PEGE+S +A FRI SF
Sbjct: 200 NILGCCWIELPAGKWFKRPENKFPVTSRCQIEVDISWTDFISHSPEGEWSPVARFRIHSF 259
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIECAGRKG FPEP DP+IQ+AN++ L G++ RN+ TL SCAPI +V SF+TE
Sbjct: 260 DIECAGRKGIFPEPNVDPIIQIANVIKLHGDEDVVTRNIFTLNSCAPIGHAEVRSFDTEA 319
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++L W +F+RE DPD+ GYNI FD PYLIE+ +
Sbjct: 320 EMLEEWAEFVRETDPDIFTGYNINNFDFPYLIERAN 355
>gi|324120752|dbj|BAJ78767.1| DNA polymerase delta catalytic subunit [Inocellia japonica]
Length = 1005
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/618 (58%), Positives = 471/618 (76%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+S IS LQ GN +TR RLAVYCLKDA LP RLL+ L N +E+ARV+GV I+
Sbjct: 386 QKEDVHYSQISGLQEGNEQTRHRLAVYCLKDAVLPLRLLNHLNSFTNDMELARVSGVTIT 445
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
L++RG+ IKV++QLL++ KQ ++P + A S++ YEGATV+E G+Y PIATLD
Sbjct: 446 TLMTRGEQIKVVTQLLKQGKQAGYLMPVHRGAQSDE-QYEGATVIEPIRGYYTDPIATLD 504
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P + KL L + + KTP FVK ++++G+LP+ILE
Sbjct: 505 FSSLYPSIMMAHNLCYTTLLNPHNKEKLGLTDDQITKTPMNNYFVKPSIRRGLLPQILEN 564
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRAK +L E DP+ + VL+GRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 565 LLAARKRAKKELAEETDPVRQKVLNGRQLALKVSANSVYGFTGAQVGKLPCLEISGSVTG 624
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE+T++ VE ++T V GYEH+A+VIYGDTDSVMV+FGV ++ M LG+EAA+Y+
Sbjct: 625 YGRTMIEYTRQEVEQRYTIVNGYEHDAQVIYGDTDSVMVKFGVKDLKRCMDLGKEAAEYV 684
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FIKPIKLEFEKVY+PYLLI+KKRYAGLY+T PEK+DKMD KGIETVRRDNC LV N
Sbjct: 685 SAKFIKPIKLEFEKVYFPYLLINKKRYAGLYFTKPEKYDKMDCKGIETVRRDNCPLVANT 744
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+ RD GAV++ K ISDLL NR+D+S LVITK LTK +DY K HVEL
Sbjct: 745 INYCLQKLLIHRDPDGAVEFTKQVISDLLCNRVDISNLVITKELTK--EDYTAKQVHVEL 802
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A++++KRD TAP +GDRVPYVI AK A Y + EDPIY LEN IPIDT YYLENQ+S
Sbjct: 803 AKKLQKRDPGTAPKIGDRVPYVICTGAKNAPTYSKGEDPIYALENRIPIDTKYYLENQLS 862
Query: 880 KPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----S 934
KPL+RIF+PIL + A LL+G+HT + S++T +M F +++ +C+GCKA++
Sbjct: 863 KPLVRIFQPILGDKAESVLLNGEHTLTRSVATSKVGALMAFTRKKETCMGCKAVLPSEYE 922
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+ LC HC+ +E+ LY + + Q ++LE F +LWT+CQ CQGSLH++VLCT+RDCPIFY
Sbjct: 923 SRALCKHCEPKESVLYQQEICQQRQLEERFAKLWTECQRCQGSLHEEVLCTNRDCPIFYM 982
Query: 995 RKKAQKDMAEAKLQLDRW 1012
RKK D+ ++ R+
Sbjct: 983 RKKVVIDLDAVAKRVQRF 1000
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 178/310 (57%), Gaps = 10/310 (3%)
Query: 102 IGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQ 161
IG + + SG +IR++G T EGHSV C VHGF PYFY PQG +
Sbjct: 1 IGTVVKGMPGAQSGPVPVIRMYGTTMEGHSVLCHVHGFSPYFYALLPQGFENSHCATLKN 60
Query: 162 ILEGRMREANRNS--KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVA-SCRG 218
L M R + KV + V + +V+ RS+ Y F I VALP +VA R
Sbjct: 61 ALNKIMLSDMRGNSEKVEECVLEVSIVECRSLQGYSGDDLSKFALIRVALPRLVAMGARL 120
Query: 219 ILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT------ 272
+ + L ++ +ESNV F +RFM+D NIVG WIE+P K+R +
Sbjct: 121 MENNAHSFFNLFNHTYRAFESNVDFDIRFMVDTNIVGCCWIELPANKWRLRNSSEHADLP 180
Query: 273 -LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVAN 331
S C E D + ++ PEGE++K+APF LSFDIEC GR+G+FP P DPVIQ+AN
Sbjct: 181 RTSRCDYEVDIAWDAFVAHSPEGEWAKVAPFYFLSFDIECQGRRGYFPTPDIDPVIQIAN 240
Query: 332 LVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNIC 391
+V G+ +P R+V TL +CAPI +V SF+TE +L AW +F+R++DPD++ GYN
Sbjct: 241 VVQRYGDAEPIYRSVFTLNTCAPIAYAEVRSFKTESKLLNAWAEFMRDMDPDIVTGYNTN 300
Query: 392 KFDLPYLIEK 401
FDLPYL+E+
Sbjct: 301 AFDLPYLVER 310
>gi|393226323|gb|EJD34100.1| putative delta DNA polymerase [Auricularia delicata TFB-10046 SS5]
Length = 961
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/620 (56%), Positives = 463/620 (74%), Gaps = 9/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIIS+LQNG ++RRRLA+YCLKDAYLPQRL+DKLM NY EMARVTGVP +
Sbjct: 342 QKEDVHHSIISELQNGTPDSRRRLAIYCLKDAYLPQRLMDKLMCFVNYTEMARVTGVPFN 401
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ IKV+SQL+R+AK+ +IP +K+ S+ YEGATV+ G+Y+ PIATLD
Sbjct: 402 FLLSRGQQIKVISQLMRRAKEDGYLIPAMKEQSSDD-QYEGATVIPPTTGYYKDPIATLD 460
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+S+YPSIM+A+N+CY+T++ +L L + +TP G FV +KG+LP ILE
Sbjct: 461 FSSMYPSIMIAHNICYTTMINRATISRLRLVLDVDYKQTPQGTFFVNPTRRKGVLPIILE 520
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL+ARKR KADLK DP ++AVLDGRQLALKISANSVYGF GA+ G LPC +ISS+ T
Sbjct: 521 HLLSARKRVKADLKNETDPFKRAVLDGRQLALKISANSVYGFPGASFGHLPCTDISSTTT 580
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR+MI TK +VED + G+EH+A VIYGDTDSVMV FG V M+LG EAA
Sbjct: 581 AYGREMIAKTKSVVEDHYRIENGFEHDARVIYGDTDSVMVDFGPSDVATCMRLGAEAAHL 640
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
++ F+ P+KLEFEKVY+PYLL++KKRYAGLYWT P+K+DK+D KG+E+VRRDNC L
Sbjct: 641 VTTHFVDPVKLEFEKVYWPYLLVNKKRYAGLYWTKPDKYDKLDAKGLESVRRDNCCLASE 700
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
+ + L+K+LV+RD GA+ YVK +++LL +R+DLS LVITK L K DY K HVE
Sbjct: 701 TMDKVLNKMLVERDPEGALAYVKKIVNNLLQDRIDLSQLVITKTLAKM--DYVSKQPHVE 758
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
A RM+KRDA +AP +GDRV YVI++ K A+ Y+R+EDP YVLE+NIPIDT YYL NQ+
Sbjct: 759 SARRMKKRDAGSAPGIGDRVAYVIVRGTKNARVYDRAEDPSYVLEHNIPIDTEYYLNNQL 818
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS---- 934
+ PL+RIFEP+L ++ LL G+H S+ I+TP+ GI+ + ++ C+GCK ++
Sbjct: 819 ATPLMRIFEPVLGARAQGLLFGNHANSMKIATPTEGGIVTYVVKKQRCLGCKTELNSRNM 878
Query: 935 -NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
NG +C++C + +LY K + +++V F RLWTQCQ CQGSLHQDVLC++RDCPIFY
Sbjct: 879 QNGAVCTNCASKTPDLYLKHTAATSKVQVAFSRLWTQCQHCQGSLHQDVLCSNRDCPIFY 938
Query: 994 RRKKAQKDMAEAKLQLDRWN 1013
RR K Q+++ ++ L R++
Sbjct: 939 RRTKVQREVEDSVALLSRFD 958
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/287 (48%), Positives = 186/287 (64%), Gaps = 24/287 (8%)
Query: 122 IFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVR 181
+FG TREG SV + F PYFY+ P G + + F + N N K+ + V
Sbjct: 1 MFGTTREGFSVLAHITDFLPYFYLPAPAGFVGEHLQPF---------QDNMNKKLGEVV- 50
Query: 182 HIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVA---SCRGILDRGIQLDGLGMKSFMTYE 238
IE+V KR+I Y+ + PFLKI V+ P ++ + +G G +TYE
Sbjct: 51 SIEIVAKRTIWEYRGEDKTPFLKITVSHPASISRECNYQGFFPAG---------KLVTYE 101
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYR-KTAKTL-SYCQLEFDCLYSDIISRHPEGEF 296
SNV + LRFM+D ++VG NW+ VP GKY+ +T++T S CQ+E D + + IS PEGE+
Sbjct: 102 SNVGYILRFMVDTHVVGMNWVTVPAGKYKLRTSQTRRSSCQIELDVRWDEFISHTPEGEW 161
Query: 297 SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
S MAP RILSFDIECAGRKG FP+P DPVIQ+A+LVT QGE +PFIRNV TLKSC+ I
Sbjct: 162 SAMAPLRILSFDIECAGRKGIFPDPQVDPVIQIASLVTKQGEDKPFIRNVFTLKSCSYIA 221
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
G D++SF E ++L AWR+F+ VDPDV+IGYN FDLPYL+++ +
Sbjct: 222 GSDILSFNEEVELLSAWRNFLGTVDPDVIIGYNTTNFDLPYLLKRAN 268
>gi|324120750|dbj|BAJ78766.1| DNA polymerase delta catalytic subunit [Protohermes grandis]
Length = 1046
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/619 (58%), Positives = 468/619 (75%), Gaps = 6/619 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH S I+ LQNG+ TR RLAVYC+KDA LP R++D+L + N +E+ARV+GV I+
Sbjct: 425 QKEDVHFSQITGLQNGDQHTRHRLAVYCIKDAMLPLRIMDRLNSLTNDMELARVSGVTIT 484
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL+RG+ +KV++QLL A+ ++P V + + YEGATV+E + +Y PIATLD
Sbjct: 485 TLLTRGEQVKVVTQLLSHARHAGYLMP-VHHVQASEEQYEGATVIEPKKDYYTLPIATLD 543
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TLV P KL L E + KTP G FVKS+++ G+LPEILE
Sbjct: 544 FSSLYPSIMMAHNLCYTTLVQPYIIDKLGLKEEDITKTPKGNYFVKSSVRCGLLPEILEN 603
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARKRAK +L DP +KAVL+GRQLALKISANSVYGFTGA VG+LPC+EIS SVTS
Sbjct: 604 LLKARKRAKNELAAETDPSKKAVLNGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTS 663
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR+MIE T+K VE++FT GY H+A+V+YGDTDSVMV+FGV + +MKLGREAA+++
Sbjct: 664 YGREMIELTRKEVEERFTLKNGYLHDAQVVYGDTDSVMVKFGVEEIAESMKLGREAAEFV 723
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FIKPIKLEFEKVY PYLLI+KKRYAGLY+T P+K+DKMD KG+ETVRRDN LV N
Sbjct: 724 SAKFIKPIKLEFEKVYCPYLLINKKRYAGLYYTRPDKYDKMDCKGLETVRRDNSPLVANT 783
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+ +D GA++Y K ISDLL NR+D+S LVI+K LTK Y K AHVEL
Sbjct: 784 INICLQKLLIHKDPEGAIKYTKQVISDLLCNRIDISQLVISKELTKGEGAYAAKQAHVEL 843
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A+++ KRD AP +GDRVPYV+I A K AY ++EDPIYVLENNIPID YYLENQ+S
Sbjct: 844 AKKLTKRDPGNAPKMGDRVPYVLIAATKNTPAYAKAEDPIYVLENNIPIDAKYYLENQLS 903
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG-- 936
KPL+RIF+PIL + ++ LL GDHTRS +++T S + F ++ +C+GC+A++S G
Sbjct: 904 KPLVRIFQPILGDKTESILLHGDHTRSKTVATSKVSALSAFTRKMETCLGCRAVLSAGDD 963
Query: 937 --TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LC HC REA LY + ++Q++ LE F RLW +CQ CQGSLH++VLCT+RDCPIFY
Sbjct: 964 SRALCKHCLPREATLYQQDLAQLRHLEERFSRLWAECQRCQGSLHEEVLCTNRDCPIFYM 1023
Query: 995 RKKAQKDMAEAKLQLDRWN 1013
RKK Q ++ ++ R++
Sbjct: 1024 RKKVQLELVTCDKRVQRFD 1042
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 128/315 (40%), Positives = 189/315 (60%), Gaps = 3/315 (0%)
Query: 90 SIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQ 149
S+ FQQ++ID+ IG + + GS ++R++GVT +G +V C VHGF PYFY++ P
Sbjct: 35 SLTFQQIEIDHYIGSPMEGMPGPTVGSVPVMRMYGVTMDGFNVLCHVHGFTPYFYVTLPD 94
Query: 150 GMGPDDISHFHQILEGRM-REANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVA 208
D F + L + +++ N+ P V +++V+K+ + Y+ +K++ F I VA
Sbjct: 95 AFNESDCLPFKKALNKTLCTDSSENNSTPDSVLEVQIVRKKCLQGYKGEKNEKFAMIRVA 154
Query: 209 LPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY-- 266
P ++++ L+ D + YESNV F +RFM+D NI G WIE+P K+
Sbjct: 155 QPKLISASVRQLENSRVYDAYPDHDYRPYESNVDFDIRFMVDMNIKGCCWIELPANKWKL 214
Query: 267 RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPV 326
R S C E D + ++ PEGE++K+APF ILSFDIECAGR FP+P DP+
Sbjct: 215 RSDMSKSSTCHYEVDVAFDSFVAHLPEGEWAKVAPFYILSFDIECAGRPNTFPDPNIDPI 274
Query: 327 IQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMI 386
IQ+AN+V G+ + NV TL +CAPI +V SF+ E D+L AW FI +VDPD +
Sbjct: 275 IQIANVVQKYGDTELVACNVFTLNTCAPIAHAEVYSFDKETDLLNAWVKFIHDVDPDFVT 334
Query: 387 GYNICKFDLPYLIEK 401
GYNI FDLPY+I++
Sbjct: 335 GYNINNFDLPYIIDR 349
>gi|167533381|ref|XP_001748370.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773182|gb|EDQ86825.1| predicted protein [Monosiga brevicollis MX1]
Length = 1305
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/698 (53%), Positives = 476/698 (68%), Gaps = 105/698 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQ GN ++RRRLAVYC+KDAYLP RLLDKLM I NY+EMARVTGVP S
Sbjct: 507 QKEDVHHSIITDLQLGNDQSRRRLAVYCMKDAYLPLRLLDKLMCIVNYIEMARVTGVPFS 566
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEAR------------ 507
+LLSRGQ IKV+SQL+R A + +L+IP + SE+ YEGATV+E +
Sbjct: 567 YLLSRGQQIKVVSQLMRHAGEHDLIIPVMDSQASEE-QYEGATVIEPKRGDILSCFLGAG 625
Query: 508 --------------------AGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKL 547
G+Y+ PIATLDF+SLYPSIM A+NLCY+TLV +
Sbjct: 626 LGHDLNTCGGGLDIRFNARPIGYYDIPIATLDFSSLYPSIMQAHNLCYTTLVKDKSVLG- 684
Query: 548 NLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQ 607
NL P+ +TP+G+ FVK+N+++G+LP+IL LL ARKRAK DLK KDP ++VL+GRQ
Sbjct: 685 NLKPDEYIRTPTGDHFVKTNVRQGLLPQILTSLLDARKRAKKDLKNEKDPFRRSVLNGRQ 744
Query: 608 LALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAE 667
LALKISANSVYGFTGATVG+LPC+EISSSVT++GRQMIE T++ VE+ ++ GY H+AE
Sbjct: 745 LALKISANSVYGFTGATVGKLPCLEISSSVTAFGRQMIEQTRQKVEEHYSIANGYSHDAE 804
Query: 668 VIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYA 727
V+YGDTDSVM++FG T+E MKL EAA ++ TF++PI LEFEKVY+PYLLI+KKRYA
Sbjct: 805 VVYGDTDSVMIKFGTTTLEETMKLAEEAAQVVTETFVRPINLEFEKVYFPYLLINKKRYA 864
Query: 728 GLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDL 787
GLYWT PEK+DKMD+KGI TVRRDNC LV +L+ CLHK+L++RD+ GAV+Y K
Sbjct: 865 GLYWTRPEKWDKMDSKGIVTVRRDNCPLVVSLINTCLHKLLIERDVEGAVEYAK------ 918
Query: 788 LMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAK 847
K L++ +DY+ K AHVELAERMRKRDA +AP +GDRV YVII+A K
Sbjct: 919 -------------KALSRAAEDYDGKQAHVELAERMRKRDAGSAPTLGDRVAYVIIQARK 965
Query: 848 GAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSIS 907
A A+E+SEDPIYVLENN+ +D YYL NQ++KPL+ IFEPI+ + +K LLSGDHTR +
Sbjct: 966 NAPAFEKSEDPIYVLENNVQLDAQYYLHNQLAKPLMSIFEPIMGDKAKTLLSGDHTRVVV 1025
Query: 908 ISTPSNS--GIMKFAKRQLSCIGCKALISN------------------------------ 935
+ SNS G+ KF K++ +C+GC+AL+++
Sbjct: 1026 KRSNSNSSEGLFKFTKKRETCLGCRALLNDSGMFSLSLSLSLSLSLSLSLSLSLSLSLSL 1085
Query: 936 --------------------GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQ 975
G LC+ CK EA Y + ++ LE F RLW+QCQ CQ
Sbjct: 1086 SLSLSIFLQFSWSCRLLCFTGALCARCKRDEAVHYQREQERLAALEERFARLWSQCQRCQ 1145
Query: 976 GSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWN 1013
GSLHQDVLCTSRDCPIFY R K QKD+ L R++
Sbjct: 1146 GSLHQDVLCTSRDCPIFYMRHKVQKDLKSQDRVLQRFD 1183
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/438 (35%), Positives = 223/438 (50%), Gaps = 67/438 (15%)
Query: 19 SWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARP 78
+ P K+ P V + F E +D + D+ IE A+R AKW RP
Sbjct: 10 AMPQKRPKVNPADAVHESTFTSELSAMD---VGADQ-------IENEPALATR-AKWTRP 58
Query: 79 --PLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKV 136
PL + ++++FQQL++D +G + + + I+R+FGVT +G+SV V
Sbjct: 59 EAPLIN---PASEALIFQQLELDSYLGSPVSNMPGPQTDTVQIVRMFGVTAKGNSVMLHV 115
Query: 137 HGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK-VPQFVRHIEMVQKRSIMYYQ 195
HGF PY Y + P + + F L+ ++ +K + V +E+V+K SI Y+
Sbjct: 116 HGFAPYLYCTMPNNLTESHLREFKTKLDVLIKNQTAAAKNFSEVVLAVEIVEKESIYGYK 175
Query: 196 QQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG------------------------- 230
FLKI + +++ R IL+ G +G
Sbjct: 176 GTGKINFLKITLIQHKFISTTRRILEGGSLSISIGPCVCFSPVLAKSVPTVATLHVPSLR 235
Query: 231 -------MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFD 281
+++ YE N+ F LRFM+D +VG NWIE+P KY R +SYCQ E D
Sbjct: 236 ALLTPSRLQALQVYEGNLEFNLRFMVDTQVVGCNWIELPAAKYQMRNEEDKVSYCQYECD 295
Query: 282 CLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQP 341
Y++++S PE + ++AP RILSFDIEC GRKG FP+P D VIQ+AN+V +QG+ +P
Sbjct: 296 IAYNNLVSHAPEDRWQEIAPLRILSFDIECQGRKGVFPDPNEDSVIQIANMVQIQGQSKP 355
Query: 342 FIRNVMTLKSCAPIVGVDVMSF----------------ETERDVLLAWRDFIREVDPDVM 385
IRNV TL SCA IVG DV F E E+ +L AW +F+RE DPDV+
Sbjct: 356 IIRNVFTLDSCAAIVGCDVREFADPTSKVSLKPGSKRNELEKQMLEAWSEFVREADPDVI 415
Query: 386 IGYNICKFDLPYLIEKED 403
GYNI FDLPYL + +
Sbjct: 416 TGYNIPNFDLPYLYNRAN 433
>gi|332241130|ref|XP_003269738.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit, partial [Nomascus leucogenys]
Length = 1071
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/595 (61%), Positives = 460/595 (77%), Gaps = 12/595 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A + L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMHEGLLMPVVKSEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + +TP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK + + V
Sbjct: 843 LVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRIDISQLVITK------EPRVYRETSVV 896
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
MRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 897 PTNGMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 956
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR+ CIGC+ ++S+
Sbjct: 957 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLSHQ 1016
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
G +C C+ E+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCP
Sbjct: 1017 GAVCEICQPXESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCP 1071
Score = 326 bits (836), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 213/333 (63%), Gaps = 6/333 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGHS 131
+W RP Q +S++FQQL+ID+ +G + P S GS ++R FGVT EG S
Sbjct: 78 RWLRP-TPPAVDPQTESLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFS 136
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC +HGF PYFY P G GP+ + + L + NR K V +E+ +
Sbjct: 137 VCCHIHGFAPYFYTPAPPGFGPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRE 196
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
S+ Y PFL+I +ALP +VA R +L++GI++ GLG SF YE+NV F +RFM+
Sbjct: 197 SMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMV 256
Query: 250 DCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
D +IVG NW+E+P GKY + + + CQLE D L+SD++S PEG + ++AP R+LSFD
Sbjct: 257 DADIVGCNWLELPAGKYALRLKEKATQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFD 316
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D
Sbjct: 317 IECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYENEED 376
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 377 LLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 409
>gi|325193152|emb|CCA27509.1| predicted protein putative [Albugo laibachii Nc14]
Length = 1084
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/623 (59%), Positives = 462/623 (74%), Gaps = 12/623 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + IISDLQ G + R RLAVYCLKDA LP +LL L + NY+EMARV GVPI
Sbjct: 459 QKEDVPYGIISDLQRGTDDDRHRLAVYCLKDASLPLQLLHNLSLLVNYIEMARVCGVPID 518
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQ---AGSEQGTYEGATVLEARAGFYEKPIA 516
+LL RGQ IKV S LLRK K NL++P +++ A S YEGATV+E +Y PIA
Sbjct: 519 YLLERGQQIKVYSMLLRKCKGANLLVPTLQRSQNANSGDAGYEGATVIEPIKAYYTVPIA 578
Query: 517 TLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEI 576
TLDFASLYPSIM A+NLCYSTLV P D KLN P +PSG+ FVK++ +KGILP I
Sbjct: 579 TLDFASLYPSIMQAHNLCYSTLVAPNDVDKLN--PLQYQTSPSGDVFVKADTRKGILPMI 636
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
+EELL+ARK+AK D+ A DP+EKAV +GRQLALKISANSVYGFTGA VGQLPCI I+SS
Sbjct: 637 IEELLSARKQAKYDMSRATDPMEKAVQNGRQLALKISANSVYGFTGAVVGQLPCIPIASS 696
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+T+YGRQ + TK+ VE +F GY +A+VIYGDTDSVMV+FGV TV AM L +EAA
Sbjct: 697 ITAYGRQFLFQTKEEVERQFCVANGYPADAQVIYGDTDSVMVKFGVETVAEAMPLAKEAA 756
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
+S F PI LEFEKVY+PYLL++KKRYAGL WTN +K++K+D+KG+ETVRRDNCLLV
Sbjct: 757 SRVSSIFPSPILLEFEKVYFPYLLMNKKRYAGLLWTNADKYEKVDSKGLETVRRDNCLLV 816
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD--DYEVKA 814
+ LV CL KIL+ +++ GA++Y KS ISDLL NR+D+SLLVITKGL K D DY+VK
Sbjct: 817 RRLVETCLDKILIQQNVAGAIEYTKSMISDLLQNRIDISLLVITKGLKKLVDQRDYKVKQ 876
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYL 874
AH ELAERMRKRDA +AP +G+R+ YVI+ K A YE++EDP+YVLEN+IPID YY+
Sbjct: 877 AHTELAERMRKRDAGSAPVLGERIAYVIVNKGKTAPLYEKAEDPVYVLENDIPIDWEYYM 936
Query: 875 ENQISKPLLRIFEPI--LKNASKELLSGDHTRSISIST--PSNSGIMKFAKRQLSCIGCK 930
+ Q+ PL RIFEPI L ELL G HTR S ++ G+M FA ++ C+GCK
Sbjct: 937 KQQLQNPLERIFEPIIGLARVRSELLQGAHTRKRSQPNLKQNSGGMMDFAVKKSKCLGCK 996
Query: 931 A-LISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
A L + +C C+ ++ + + + VQELE+LF R WTQCQ CQGSLHQDVLCTSRDC
Sbjct: 997 APLETMAAICKSCRTHQSSILIRHLQSVQELEILFHRFWTQCQNCQGSLHQDVLCTSRDC 1056
Query: 990 PIFYRRKKAQKDMAEAKLQLDRW 1012
PIFY+R K QKD+ E++ L+R+
Sbjct: 1057 PIFYKRIKVQKDLGESQHALERF 1079
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/330 (41%), Positives = 185/330 (56%), Gaps = 29/330 (8%)
Query: 90 SIMFQQLDIDY---------------VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
SI FQ +D+D V + + +L P +IR++GV G+SV
Sbjct: 65 SIDFQWIDVDMYDRQPLQFRTETGSKVYAEKSNQLFP-------VIRVYGVNATGNSVVL 117
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQK-RSIMY 193
VHGF PYFY +CP+ + Q L + ++ P + +E+V+ +SI
Sbjct: 118 HVHGFMPYFYAACPENFDYEKCGQVRQALNKTLESTMKSGPPP--IIGLEVVRNLKSIYG 175
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNI 253
+Q S K+ V++P V R +L+ GI L G +S+ TYESNV F LRFMID I
Sbjct: 176 FQFDFSMTVWKVYVSMPAFVPKVRSLLENGISLPGF--RSYQTYESNVPFLLRFMIDKEI 233
Query: 254 VGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC 311
G NW++ P G Y R S CQLE D +D+ S P G++SK+APFR+LSFDIEC
Sbjct: 234 HGCNWLQAPKGMYSIRSANDKQSSCQLELDIACTDLKSHSPTGQWSKLAPFRVLSFDIEC 293
Query: 312 AGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLL 371
GRKGHFPE HDP+IQ+AN+V QG RNV L +C PIVG VM F E D+L
Sbjct: 294 MGRKGHFPEAEHDPIIQIANIVQEQGSPALLFRNVFVLGTCKPIVGTSVMEFVREEDMLE 353
Query: 372 AWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
W F+R DPD++ GYN+ FD+PY++ +
Sbjct: 354 RWAAFVRLADPDIITGYNVDNFDIPYILNR 383
>gi|84043446|ref|XP_951513.1| DNA polymerase delta catalytic subunit [Trypanosoma brucei TREU927]
gi|33348312|gb|AAQ15638.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62359086|gb|AAX79533.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma brucei]
gi|261326367|emb|CBH09326.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 1026
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/623 (57%), Positives = 471/623 (75%), Gaps = 20/623 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQ GN ETRRRLAVYCLKDAYLP +LL++LM + N VEMARVTGVPI
Sbjct: 408 QKEDVHHSIISDLQQGNDETRRRLAVYCLKDAYLPVKLLERLMVVVNNVEMARVTGVPIG 467
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ IKV S LLRKA+ +N V+P V+ G+EQ YEGATV+E + G Y +PI TLD
Sbjct: 468 WLLERGQQIKVFSMLLRKARARNFVVPTVETTGAEQRRYEGATVIEPKKGHYIEPIVTLD 527
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSI++A+NLCYSTL+ + N TP+ F++ + G+LPE+L +
Sbjct: 528 FASLYPSIIIAHNLCYSTLLPGHEVN--NYESGMKEDTPTEHKFIRKEVFPGVLPEVLRD 585
Query: 580 LLAARKRAKADLKE-AKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LLAAR++A+A +K+ ++D LE VL+GRQLALK+SANSVYGFTGA VG+LPC+E+S++VT
Sbjct: 586 LLAARRQARALMKDVSQDSLEYKVLNGRQLALKVSANSVYGFTGAQVGRLPCLELSATVT 645
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEA-------AMKL 691
SYGR+MIE TK+ VE K+ AEVIYGDTDSVM++ + E+ AM
Sbjct: 646 SYGRRMIEETKQFVEKKYV-------GAEVIYGDTDSVMIRCVINADESDTNKLQQAMDF 698
Query: 692 GREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRD 751
G+EAA+ +S TF PI+LEFEKVYYP+LL++KKRYAGL WTN ++DK+D KGIETVRRD
Sbjct: 699 GKEAAEAVSSTFPDPIRLEFEKVYYPFLLMNKKRYAGLLWTNTVRYDKLDAKGIETVRRD 758
Query: 752 NCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE 811
+C LV ++++ L+++L+ R + AV++VK TI DLL NR+D+S LVITK +K+ +Y
Sbjct: 759 SCPLVASVISGVLNRMLIQRSVESAVEFVKGTIRDLLHNRLDISQLVITKSFSKSESEYA 818
Query: 812 VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTH 871
AH+ L ERMR+RD A+APNVGDRV YVI++AAKGAKAYERSEDPIYVLENNIPIDT
Sbjct: 819 GAQAHIALVERMRRRDPASAPNVGDRVAYVIVRAAKGAKAYERSEDPIYVLENNIPIDTQ 878
Query: 872 YYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GIMKFAKRQLSCIGC 929
+YLE+Q+ PLLR+FE +L++ S L GDHTR +S+S P+ + G+MKF K QL CI C
Sbjct: 879 HYLEHQLGPPLLRVFEGVLQDPSV-LTKGDHTRYVSVSAPNRNAGGLMKFVKFQLQCISC 937
Query: 930 KALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
+++I G LC C ++Y K V++ E ++ ++WTQCQ+CQGSL+Q+V+CTSRDC
Sbjct: 938 RSVIQEGALCDACSVMGPDIYGKIVAKRNHYEAVYSQVWTQCQQCQGSLNQEVICTSRDC 997
Query: 990 PIFYRRKKAQKDMAEAKLQLDRW 1012
P+FY RKK QKD+ E + LDR+
Sbjct: 998 PVFYLRKKVQKDVHEQQTLLDRF 1020
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 186/329 (56%), Gaps = 8/329 (2%)
Query: 76 ARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCK 135
+RPP+ Y+ ++FQ LD G + + + I+RI+GVT+EGHSV
Sbjct: 8 SRPPVPPDYLQS--DLLFQLLDCCQTQGSPHGIVSTVKHEDVPIVRIYGVTKEGHSVLVH 65
Query: 136 VHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQ 195
+ FEP+ +I P F Q L + + + V V IE ++RS+MYY
Sbjct: 66 CYNFEPHLWIRAPNRWLDVYSKTFVQELNASL---DPLTHVSNTVVRIERHKRRSLMYYN 122
Query: 196 QQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL--GMKSFMTYESNVLFALRFMIDCNI 253
+LK++V LP + R +L G+ G G+++F T+ESNV+F LRFM+D NI
Sbjct: 123 PDGECDYLKVIVQLPQHIPRLRTLLSSGVMCVGAWEGLRAFPTFESNVIFPLRFMVDGNI 182
Query: 254 VGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAG 313
G NWI VP G++ + S CQ+E C + + S G++ +APFRILS DIEC G
Sbjct: 183 GGCNWITVPAGQFHLFSPRTSTCQIEVCCSHEVLQSHEAVGDYLLIAPFRILSIDIECEG 242
Query: 314 RKGHFPEPTHDPVIQVAN-LVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLA 372
RKG FPE DPVIQ+AN V E+ R + TLKSC I G +V SFETE ++L+
Sbjct: 243 RKGLFPEAERDPVIQIANHCVNYGKEEDALTRTIFTLKSCGAIAGANVCSFETEEEMLVQ 302
Query: 373 WRDFIREVDPDVMIGYNICKFDLPYLIEK 401
W F++ +DPD + GYNIC FD PYL+ +
Sbjct: 303 WARFVKRIDPDFLTGYNICNFDFPYLLSR 331
>gi|452823008|gb|EME30022.1| DNA polymerase delta subunit 1 [Galdieria sulphuraria]
Length = 1070
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/622 (57%), Positives = 474/622 (76%), Gaps = 18/622 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++L +GN TRRRLAVYCLKDAYLP RL++KLM + NY+E+ARV G+P++
Sbjct: 450 QKEDVHHSIITELFHGNENTRRRLAVYCLKDAYLPHRLMEKLMSLTNYMELARVAGIPLA 509
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQ----AGSEQGTYEGATVLEARAGFYEKPI 515
+LLSRG IKV+S L RKA ++L+IP++K + E +YEGATV+E + GFY+ PI
Sbjct: 510 WLLSRGHMIKVVSLLHRKAFPESLLIPDLKNTSHNSSEEAESYEGATVIEPKRGFYKMPI 569
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPE 575
ATLDFASLYPSIMMA+N+CYSTLV + + L PE K+PSG+ +V+ +++KG+L +
Sbjct: 570 ATLDFASLYPSIMMAHNICYSTLVRKDRVKYLK--PEDYIKSPSGDCYVRPSVKKGVLSK 627
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
ILE+LL+ARK AK +L++A DP ++VL+GRQLALKISAN+VYGFTGA+ G+LPC EIS+
Sbjct: 628 ILEDLLSARKVAKRELEQATDPFLRSVLNGRQLALKISANAVYGFTGASRGKLPCTEISA 687
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVP-TVEAAMKLGRE 694
S+T++GR+MIE TK LVE KF + + VIYGDTDSVMV+F T+E +M LG++
Sbjct: 688 SITAFGRRMIETTKSLVESKFPS-------SVVIYGDTDSVMVKFRDDLTLEESMSLGQQ 740
Query: 695 AADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCL 754
AAD IS +F KPIKLEFEK YYPYLLI KKRYAGL WT E +DKMD KGIETVRRDNC
Sbjct: 741 AADIISQSFPKPIKLEFEKCYYPYLLIQKKRYAGLLWTKTETYDKMDCKGIETVRRDNCK 800
Query: 755 LVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA 814
LV N+V++ L K+LV+RD+ GA+ +VK TISDLL N++D+SLLVI+K L+K DY+
Sbjct: 801 LVANVVSKVLEKLLVERDVQGAIDFVKKTISDLLQNKVDISLLVISKELSKAAADYDANQ 860
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYL 874
AHV L +++ +RD +AP++GDR+PYV IK K A+ER+EDPIYVLE+N+P+DT YYL
Sbjct: 861 AHVTLYKKLYQRDPGSAPSLGDRIPYVTIKGRKDQPAHERAEDPIYVLEHNLPLDTEYYL 920
Query: 875 ENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI- 933
+N + KPL RIFEPI+ L G+HTRSI+++TPS GIM+F K ++C+GC+ I
Sbjct: 921 KNMLRKPLERIFEPIIGKNVSSLFEGEHTRSITVTTPSTGGIMRFTKVSVTCLGCRTPIP 980
Query: 934 ---SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
S LC +CK EA +Y K + V+E E + LWTQCQ C GS+ QDVLC++ DCP
Sbjct: 981 QTESKEPLCKYCKANEASIYEKILCNVREYERQYAMLWTQCQRCMGSICQDVLCSNSDCP 1040
Query: 991 IFYRRKKAQKDMAEAKLQLDRW 1012
IFYRR+K QKD+ + QL+R+
Sbjct: 1041 IFYRRRKVQKDLEDTSKQLERF 1062
Score = 289 bits (740), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 155/377 (41%), Positives = 221/377 (58%), Gaps = 14/377 (3%)
Query: 39 LDEDVFLDETLLPEDEESLILRDIE---QRQDFASRLAKWARPPLSSGYVSQCQSIMFQQ 95
+D+D + E+LL + E+ IL +E R F + +AR + ++ Q
Sbjct: 8 IDDDSIIQESLLYDSEKQEILEPVEYTQTRSKFQHLFSSYARAGSPLLFGEDAGNLRILQ 67
Query: 96 LDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDD 155
LD+DY I ++ S SAA++RI+GVT G+SV +VHGF P+F+I CP P D
Sbjct: 68 LDVDYEI--VQKDTFLEDSSSAAVLRIYGVTEGGNSVLARVHGFRPFFFIICPSQFDPAD 125
Query: 156 ISHFHQILEGRMREAN--RNSKVPQFVRHIEMVQKRSIMYYQQQKSQP---FLKIVVALP 210
+ + LE R R + +N + P + +E+ + RS++Y+ S P FLKI VALP
Sbjct: 126 LPAIKESLEKRARAVSSMKNCQGP-IIHDLEIFEGRSLLYFV--PSDPLIRFLKITVALP 182
Query: 211 TMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT 269
+ V IL+RG I + T+E++V F LRFMI+ N+ G +W+E+P +Y
Sbjct: 183 SYVRQLAQILERGDIDFSPYEESRYSTFEASVDFILRFMIETNMYGCSWVEMPSNRYHLP 242
Query: 270 AKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQV 329
K S+ Q E D Y+ ++ P GE+ K AP RILSFDIECAGR G FPEP HD VIQ+
Sbjct: 243 EKQTSHMQFEIDIHYTHLVCHAPHGEWLKTAPIRILSFDIECAGRPGVFPEPEHDQVIQI 302
Query: 330 ANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYN 389
AN +T G+ +P R V+TL SCAPI G V+SF++E ++L AW F+ DPD++ GYN
Sbjct: 303 ANYMTETGKSEPIARTVLTLGSCAPIAGAKVLSFDSEAELLEAWVSFLCATDPDILTGYN 362
Query: 390 ICKFDLPYLIEKEDVHH 406
I FDLPYL+ + V H
Sbjct: 363 IVNFDLPYLLNRASVLH 379
>gi|353237606|emb|CCA69575.1| probable DNA polymerase delta catalytic subunit [Piriformospora
indica DSM 11827]
Length = 1069
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/578 (62%), Positives = 450/578 (77%), Gaps = 15/578 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS+I+DLQNG E+RRRLAVYCLKDAYLPQRL+DKLM NY EMARVTG+P +
Sbjct: 456 QKEDVHHSVITDLQNGTPESRRRLAVYCLKDAYLPQRLMDKLMCFINYTEMARVTGIPFN 515
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQSIKV+SQL R+A + +IP K G E YEGATV+E GFY+KPIATLD
Sbjct: 516 YLLSRGQSIKVVSQLYRRANSEGYLIPATKSEGGED-QYEGATVIEPSRGFYKKPIATLD 574
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL+ + +L L + +TP+ + F + +KG+LP +LE
Sbjct: 575 FSSLYPSIMMAHNLCYTTLLNKDTIDRLGLIRDVDYIQTPNKDFFATTKRRKGLLPTVLE 634
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L+AARKRAKADLK+ DP ++AVLDGRQLALKISANSVYGFTGAT+G+LPC+EISSSVT
Sbjct: 635 DLIAARKRAKADLKKETDPFKRAVLDGRQLALKISANSVYGFTGATIGKLPCLEISSSVT 694
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMIE TK +VE +F+ G + +A VIYGDTDSVMV+FG +E AM+ GREAA +
Sbjct: 695 AYGRQMIERTKTVVESQFSIANGRKWDARVIYGDTDSVMVEFGCEDLETAMECGREAAAF 754
Query: 699 ISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
++ T F+KPI LEFEKVY+PYLLISKKRYAGLYWT PEK+DKMD KGIETVRRDNC LV
Sbjct: 755 VTETEFVKPINLEFEKVYFPYLLISKKRYAGLYWTKPEKYDKMDAKGIETVRRDNCRLVS 814
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ CL K+L+D+D+ GA YVK ISDLL N++D+S LVITK L+K + Y+ K AH
Sbjct: 815 TVIETCLQKLLIDKDVEGAESYVKRMISDLLQNKIDMSQLVITKALSK--ETYDGKQAHD 872
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA+RMR RDA +AP +GDRVPYVIIK AK A AYE++EDP+YVLENNIPIDT YYL+NQ
Sbjct: 873 ELAKRMRARDAGSAPALGDRVPYVIIKGAKSAAAYEKAEDPLYVLENNIPIDTKYYLDNQ 932
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKA------ 931
++KPL RIFEPIL + LL+GDHTR++ I+TP+ G+MKFA + +C+GCK
Sbjct: 933 LAKPLERIFEPILGDKVSRLLNGDHTRTVQIATPTTGGLMKFAVKTATCLGCKTPLKSTN 992
Query: 932 LISNGTLCSHCKGREAELY----CKTVSQVQELEVLFG 965
+ NG +C++C+ R ELY C +S +L++ G
Sbjct: 993 SVPNGAVCNNCRPRLPELYQKQVCPWISAYPDLQLFVG 1030
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/360 (45%), Positives = 227/360 (63%), Gaps = 39/360 (10%)
Query: 58 ILRDIEQRQDFASRLA----KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLS 113
IL IE + AS + +W R P+ + +I+FQQ+DI+ I ++NR L
Sbjct: 48 ILERIEGEEASASGVEGGADQWDRLPMKP-INEKTDTIVFQQIDIEQYI-EANRPKL--- 102
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
R++GVT +GHSV ++GF PYFY+ CP+G +D+ F RE
Sbjct: 103 -------RMYGVTEDGHSVMANIYGFLPYFYVHCPRGFLEEDLGPF--------REFINK 147
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLD------ 227
+ P + I++V+K+SI Y+ PFLKI++++P +V RG ++G +LD
Sbjct: 148 ATDPDAILDIQIVKKKSIWGYRGDTDVPFLKIILSIPRLVPKVRGAFEKG-ELDYKELFN 206
Query: 228 --GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCL 283
G+G + TYESN+L+ LRFM+D + G NWIE+P GKY RK+ KT S CQLE D
Sbjct: 207 RGGMGTE---TYESNLLYVLRFMVDTKVTGMNWIEIPAGKYTVRKSNKT-SDCQLEVDVQ 262
Query: 284 YSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFI 343
+ IS PEG++S MAPFRILSFDIECAGRKG FP+ DPVIQ+AN+VT QGE +PFI
Sbjct: 263 WDQFISHAPEGQWSHMAPFRILSFDIECAGRKGTFPDAKIDPVIQIANMVTRQGESKPFI 322
Query: 344 RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
RNV TL +CA IVG V+S + E ++L AW DF++ VDPD++IGYNI FD PYL+++ +
Sbjct: 323 RNVFTLNTCAHIVGSQVISHQHEGNMLQAWSDFVKRVDPDIIIGYNIANFDFPYLMDRAE 382
>gi|330793430|ref|XP_003284787.1| DNA polymerase delta catalytic subunit [Dictyostelium purpureum]
gi|325085281|gb|EGC38691.1| DNA polymerase delta catalytic subunit [Dictyostelium purpureum]
Length = 1026
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/618 (59%), Positives = 475/618 (76%), Gaps = 9/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH SIISDLQNG + RRRLAVYC+KDA LP +LLDKLM + NY EMARVTGVP+S
Sbjct: 411 QKEDVHFSIISDLQNGTDDDRRRLAVYCIKDAALPMKLLDKLMLLINYTEMARVTGVPLS 470
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RG+ +KVLSQL RKA ++ +IP K G ++GA V+E + FY+ PIATLD
Sbjct: 471 YLLGRGEGVKVLSQLYRKAMVEDFLIPTYKVTGKAGEKFKGAVVIEPKCAFYDTPIATLD 530
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F SLYPSIMMA+NLCYSTL+ E+A+KL P + TPSG+ F+ + +KG+LP ILEE
Sbjct: 531 FTSLYPSIMMAHNLCYSTLLPAEEAKKL--PADEYTVTPSGDHFILPHKKKGLLPRILEE 588
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK AK LK KDP +KAVLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVTS
Sbjct: 589 LLSARKNAKELLKNEKDPFKKAVLDGRQLALKISANSVYGFTGARVGKLPCVEISRSVTS 648
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+M++ TKK+VE+++T GY H+A VIYGDTDSVMV+FGVPTV AM LGREA+ +
Sbjct: 649 FGREMLDTTKKIVEERYTIANGYNHDAVVIYGDTDSVMVKFGVPTVAEAMALGREASKEV 708
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ FI+PI L+FEKVYYPYLL++KK+YAGL+WT P+ DKMD KG+ETVRRD CLLV+N+
Sbjct: 709 TKHFIRPINLDFEKVYYPYLLMAKKKYAGLFWTKPDIHDKMDVKGLETVRRDTCLLVRNV 768
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
V+ L K+L+++DI A +Y KS ISDLL NR+DLS+LVITK L+K+ Y+ + H EL
Sbjct: 769 VSTILKKLLIEKDIKQAEEYTKSVISDLLQNRLDLSMLVITKALSKS--QYKGRVIHNEL 826
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A++MR R+ ATAPN+GDRVPYV+I+ KGA YE++EDP+YVLE+NI +DT YYL+ Q+
Sbjct: 827 AQKMRARNPATAPNLGDRVPYVVIQGLKGAPIYEKAEDPLYVLEHNILLDTQYYLDKQLK 886
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFA--KRQLSCIGCKALISN-- 935
PLLRIF+P+L N +++ +G+HTR+I+ ST S++ F +++ C+ C +++
Sbjct: 887 APLLRIFKPLLPNP-EQIFAGEHTRTIAQSTLSSTNNPFFGTLEKKKVCMSCPNELTSEE 945
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
T+C +CK +E +LY +++ V +LE F WTQCQ C GSLHQ VLC++RDCPIFY R
Sbjct: 946 STVCKNCKHKEGDLYQTSLNNVTKLENKFAESWTQCQRCSGSLHQPVLCSNRDCPIFYMR 1005
Query: 996 KKAQKDMAEAKLQLDRWN 1013
K Q D+ EAK L+R+N
Sbjct: 1006 TKVQIDLIEAKKTLNRFN 1023
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 158/345 (45%), Positives = 217/345 (62%), Gaps = 15/345 (4%)
Query: 61 DIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYV-IGDSNRELLPLSSGSAAI 119
D++ + D + ++ WAR P+ S + + S++FQQL++DY I + + S G +
Sbjct: 2 DLDIQDDGSKQITLWARNPIPSDFSPKKDSLIFQQLEVDYAEIKEPVPGMPGPSVGPLPV 61
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQF 179
+R+FGVT+ G+SV CKVHGF PYF+ISCP D F + L N N KV
Sbjct: 62 VRLFGVTKNGNSVLCKVHGFLPYFFISCPPNFTQSDCKSFKKAL-------NVNIKVEDI 114
Query: 180 VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG---IQLDGLGMKSFMT 236
V I +VQK+SIM Y F++I + LP V CR IL+ G ++ G + + T
Sbjct: 115 VISIRIVQKKSIMGYNPNPLTDFIEITLILPKFVTRCRDILETGKHRFEIPGQPFRQYQT 174
Query: 237 YESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEF 296
YESN+ FALRF+ID I G +WIE+P KY+ + +S CQ+E D ++++ E
Sbjct: 175 YESNIPFALRFLIDKKIPGCSWIELPANKYQFSENQVSTCQIEVDISNKELLNYSDES-- 232
Query: 297 SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
APFRILSFDIECAGRKG FPEP DPVIQ+AN+V QGE +PFI+N+ TLK C+ IV
Sbjct: 233 --FAPFRILSFDIECAGRKGFFPEPEKDPVIQIANIVKNQGESEPFIKNIFTLKGCSSIV 290
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
G V+S + E+D+L WR F+ +VDPD++IGYNI FDLPYLI +
Sbjct: 291 GAHVISHKCEKDMLKEWRKFLIKVDPDIIIGYNIANFDLPYLISR 335
>gi|324120760|dbj|BAJ78771.1| DNA polymerase delta catalytic subunit [Lucidina biplagiata]
Length = 1045
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/618 (58%), Positives = 470/618 (76%), Gaps = 8/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SII+DLQNG+ +TRRRLAVYC+KDA LP RLLD + N +EMARVTGV I+
Sbjct: 423 QKEDVHYSIITDLQNGDEQTRRRLAVYCIKDADLPLRLLDHVKSFANDIEMARVTGVSIT 482
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LL++G+ IKV++QLLR ++Q +P + A S + YEGATV+E G+Y PIATLD
Sbjct: 483 SLLTKGEQIKVVAQLLRHSQQSGYFMPTHRYAPSSE-QYEGATVIEPIRGYYTDPIATLD 541
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIM+A+NLCY+TL+ KL L + + TPS FVKS+++ G+LPEIL++
Sbjct: 542 FSSLYPSIMIAHNLCYTTLLHSGMKDKLGLTSDEITVTPSQNMFVKSSVRPGLLPEILQQ 601
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARKRAK LK+ +DP+ +AVL+GRQLALKISANSVYGFTGA VG+LPC+EIS SVT+
Sbjct: 602 LLAARKRAKDALKDEQDPVMRAVLNGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTA 661
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE T+ VE ++ G+E++A+VIYGDTDSVMV F V T+E M+LGREAA I
Sbjct: 662 YGRSMIEQTRLEVERHYSVANGFENDAKVIYGDTDSVMVNFQVKTLEQTMELGREAAGLI 721
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F+KPIKLEFEKVY+PYLLI+KKRYAGLY+T +K+DKMD KGIETVRRDNC LV ++
Sbjct: 722 SQKFVKPIKLEFEKVYFPYLLINKKRYAGLYFTRTDKYDKMDCKGIETVRRDNCTLVVDV 781
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+ RD GA+ Y K ISDLL N +D+S LVITK LTK DY K AHVEL
Sbjct: 782 INTCLQKLLIYRDPDGAIAYAKRIISDLLQNNVDISQLVITKELTKA--DYATKVAHVEL 839
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
+++M KRD +AP +GDR+PYVII AAK A++++EDPIYVLENNIPID YYLENQ+S
Sbjct: 840 SKKMTKRDPGSAPKLGDRIPYVIIAAAKNTPAFQKAEDPIYVLENNIPIDATYYLENQLS 899
Query: 880 KPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT- 937
KPL+RIF+PIL NA LL G+HTR+ ++ T + F +++ +C+GC+ +++N +
Sbjct: 900 KPLVRIFQPILGDNAESILLRGEHTRTRTVVTSKVGALAAFTQKKETCLGCRTVLANSSA 959
Query: 938 ---LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LCS+CK +EA LY + +S LE F L+T+CQ C GSLH+D+LCTSRDCPIFY
Sbjct: 960 GEALCSYCKPKEASLYQQELSHHGLLEDRFAALFTECQRCMGSLHEDILCTSRDCPIFYI 1019
Query: 995 RKKAQKDMAEAKLQLDRW 1012
RKK Q ++ ++ ++ R+
Sbjct: 1020 RKKVQIELQSSEKRITRF 1037
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 205/338 (60%), Gaps = 24/338 (7%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP-LSSGSAAIIRIFGVTREGHSVC 133
+ RPP+ + FQQL++D+ I + +P +GS ++R+FGVT EGHSVC
Sbjct: 24 FYRPPIKE----PSTELTFQQLELDHYISKAPYSNMPGAQTGSVPVMRMFGVTAEGHSVC 79
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN-----SKVPQFVRHIEMVQK 188
C VHGF PYFY+ + P D + H R + KV + V +E+ +
Sbjct: 80 CHVHGFHPYFYV-----LLPSDFTDTHDFKNKLNRAVLSDVKSFADKVSEAVLMVEIKEG 134
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
+S++ + ++ F KI VALP VA+ + IL+ G+ + +SF ++ESNV LRFM
Sbjct: 135 KSLLEFTGHENSKFAKITVALPRFVAAAKRILENGVYEN----RSFSSFESNVDIDLRFM 190
Query: 249 IDCNIVGGNWIEVPVGKYRKTAKT-----LSYCQLEFDCLYSDIISRHPEGEFSKMAPFR 303
ID +I+G +WI +P+GK+ +S CQ+E D + +I++ PEGE++K+APFR
Sbjct: 191 IDTHILGCSWIHLPLGKWHCRGNNSQWPIMSRCQIECDVSWENIVAHLPEGEWAKVAPFR 250
Query: 304 ILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSF 363
+ SFDIECAGRKG FPE DPVIQ+AN+ L G RNV TL +CA I +V F
Sbjct: 251 LHSFDIECAGRKGIFPEANVDPVIQIANVXKLYGSDDVLTRNVFTLNTCAAIGHAEVRCF 310
Query: 364 ETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
ETE+ +L AW DF+R++DPDV GYNI FD+PYL+++
Sbjct: 311 ETEQQMLEAWADFVRDLDPDVFTGYNINNFDIPYLLDR 348
>gi|355712611|gb|AES04406.1| polymerase , delta 1, catalytic subunit 125kDa [Mustela putorius
furo]
Length = 585
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/581 (61%), Positives = 450/581 (77%), Gaps = 6/581 (1%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG 496
LL++LM + N +EMARVTGVP+ +LLSRGQ +KV+SQLLR+A ++ L++P VK G E
Sbjct: 1 LLERLMVLVNAMEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMREGLLMPVVKTEGGED- 59
Query: 497 TYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNK 556
Y GATV+E G+Y+ PIATLDF+SLYPSIMMA+NLCY+TL+ P A++L L + K
Sbjct: 60 -YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQRLGLTEDQFIK 118
Query: 557 TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANS 616
TP+G+ FVK++++KG+LP+ILE LL+ARKRAKA+L + DPL + VLDGRQLALK+SANS
Sbjct: 119 TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANS 178
Query: 617 VYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSV 676
VYGFTGA VG+LPC+EIS SVT +GRQMIE TK+LVE K+T GY NA+V+YGDTDSV
Sbjct: 179 VYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVENGYGANAKVVYGDTDSV 238
Query: 677 MVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PE 735
M +FGV +V AM LGREAAD++SG F PI+LEFEKVY+ YLLISKKRYAGL +++ P+
Sbjct: 239 MCRFGVSSVAEAMALGREAADWVSGHFPPPIRLEFEKVYFTYLLISKKRYAGLLFSSRPD 298
Query: 736 KFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLS 795
D+MD KG+E VRRDNC LV NLVT L ++L+DRD GAV + + ISDLL NR+D+S
Sbjct: 299 THDRMDCKGLEAVRRDNCPLVANLVTASLRRLLIDRDPAGAVAHAQDVISDLLCNRIDIS 358
Query: 796 LLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERS 855
LVITK LT+ DY K AHVELAERMRKRD +AP++GDRVPYVII A KG AY +S
Sbjct: 359 QLVITKELTRAAADYAGKQAHVELAERMRKRDPGSAPSLGDRVPYVIIGATKGVAAYMKS 418
Query: 856 EDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSN 913
EDP++VLE+++PIDT YYLE Q++KPLLRIFEPIL E LL GDHTR ++ T
Sbjct: 419 EDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKV 478
Query: 914 SGIMKFAKRQLSCIGCKALISN-GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQ 972
G++ FAKR CIGC+ ++++ G +C C+ RE+ELY K VS + LE F RLWTQCQ
Sbjct: 479 GGLLAFAKRHSCCIGCRTVLNHQGAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQ 538
Query: 973 ECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWN 1013
CQGSLH+DV+CTSRDCPIFY RKK +KD+ + + L R+
Sbjct: 539 RCQGSLHEDVICTSRDCPIFYMRKKVRKDLEDQEQLLRRFG 579
>gi|324120756|dbj|BAJ78769.1| DNA polymerase delta catalytic subunit [Stichotrema asahinai]
Length = 1050
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/620 (57%), Positives = 463/620 (74%), Gaps = 11/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SII+DL NG+ TR+RLAVYC+KDA LP RL++ L N +EMARVTGV ++
Sbjct: 431 QKEDVHYSIITDLHNGDEHTRKRLAVYCVKDADLPMRLINHLNCFTNDIEMARVTGVMLT 490
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIP--NVKQAGSEQGTYEGATVLEARAGFYEKPIAT 517
LL++G+ +KV++QLLR + N +P V +EQ +EGATV+E G+Y PIAT
Sbjct: 491 SLLAKGEQVKVVAQLLRHCQAANYFMPMHQVNLDATEQ--FEGATVIEPIRGYYTNPIAT 548
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
LDF+SLYPSIM+A+NLCY+TL+ P D + L + ++ TP+ FVKS++++G+LP+IL
Sbjct: 549 LDFSSLYPSIMIAHNLCYTTLLNPGDKARYELTDDQISLTPANNQFVKSSVRRGLLPQIL 608
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
E LL+ARKR K LK DP++K+VLDG+QLALKISANSVYGFTGA VG+LPC++IS SV
Sbjct: 609 ESLLSARKRTKLQLKNELDPIKKSVLDGKQLALKISANSVYGFTGAQVGKLPCLQISGSV 668
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
T+YGR MI TK+ VE+ FT GYE NA VIYGDTDSVM+ F V +E +M+LGREAA
Sbjct: 669 TAYGRLMINMTKEEVENHFTVANGYESNARVIYGDTDSVMIDFNVKAIEKSMELGREAAR 728
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
IS FI PIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDNC LV
Sbjct: 729 EISAKFIDPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGIETVRRDNCTLVV 788
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
+L+ CL K+L+DRD GAV Y K ISDLL N +D+S LVITK LTK +DY+ K AH
Sbjct: 789 DLINTCLQKLLIDRDPDGAVMYAKQIISDLLRNDIDISQLVITKELTK--NDYQAKQAHS 846
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA++M KRD AP +GDR+PYVI A+K A++++E+PIYVLENNIPIDT YYLENQ
Sbjct: 847 ELAQKMAKRDPGNAPKLGDRIPYVITAASKNTPAFQKAEEPIYVLENNIPIDTRYYLENQ 906
Query: 878 ISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG 936
ISKPL+RIF+P+L NA LL GDHTR ++ T + F R+ +C+GCKAL++
Sbjct: 907 ISKPLVRIFQPVLGDNAESILLHGDHTRVKTVVTSKVGPMSMFLTRRETCLGCKALLNKA 966
Query: 937 ----TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
+CS CK E ++Y + + VQ+L+ F L+++CQ CQGS+H+++LCT+RDC IF
Sbjct: 967 EEKNAICSRCKPNECQVYQQEFANVQQLQKKFSMLFSECQRCQGSIHEEILCTNRDCSIF 1026
Query: 993 YRRKKAQKDMAEAKLQLDRW 1012
Y RKK Q ++ A ++ R+
Sbjct: 1027 YLRKKVQVELDAAIGKIKRF 1046
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 199/332 (59%), Gaps = 10/332 (3%)
Query: 77 RPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKV 136
RPP+ S+ +S++FQ+++ID+ +G + GS I+R+FG T+ G+SVCC V
Sbjct: 28 RPPVLK-IDSESESLVFQEIEIDHYLGAPINNDFSIR-GSVPIMRMFGSTKSGNSVCCHV 85
Query: 137 HGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYY 194
HGF PYF I P P+ I F + L + R++K + + V IE++ +S+ Y
Sbjct: 86 HGFYPYFMIKLPNNFQPEHIIAFEKKLNEAVICDMRSNKENIVKAVMGIEIIMGQSLYGY 145
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMT-YESNVLFALRFMIDCNI 253
F KI V LP ++A + +L+ I + L S +T YE+NV +RFMID I
Sbjct: 146 SGATKSKFAKISVVLPKLIAPAKRLLE-SINIHPLINSSAVTSYEANVDIEMRFMIDKKI 204
Query: 254 VGGNWIEVPVGKYRKTAKT----LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
G WIE+ K+ ++T ++ CQ+E D +D I+ P+ E+S +APFR LSFDI
Sbjct: 205 YGCCWIELVANKWEIRSETGRKPITNCQIEVDVDVNDFIAHEPDNEWSDVAPFRFLSFDI 264
Query: 310 ECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
ECAGRKG FPEP DP+IQ+AN+V L G + I NV TL +CAPI V SF E D+
Sbjct: 265 ECAGRKGIFPEPKVDPIIQIANVVRLHGSSENLICNVFTLGTCAPICHAKVYSFSKESDM 324
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
L AW F+R++DPD+ GYNI FD PYLIE+
Sbjct: 325 LEAWAQFVRDIDPDLFTGYNINNFDFPYLIER 356
>gi|340052318|emb|CCC46594.1| putative DNA polymerase delta catalytic subunit [Trypanosoma vivax
Y486]
Length = 1026
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/623 (56%), Positives = 462/623 (74%), Gaps = 20/623 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS I++LQ GN ETRRRLAVYCLKDAYLP +LL++LM + N+VEMARVTGVPI
Sbjct: 408 QKEDVHHSNIAELQQGNHETRRRLAVYCLKDAYLPVKLLERLMIVVNHVEMARVTGVPIG 467
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ IKV S LLRKA+ ++L+IP ++ +G +Q +EGATV+E G Y P+ TLD
Sbjct: 468 WLLERGQQIKVFSMLLRKARLRDLLIPTLEYSGGDQRGFEGATVIEPTKGLYMTPVVTLD 527
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSI++A+NLCYSTLV +D P + +N TP+G FV ++ G+LPE+L++
Sbjct: 528 FASLYPSIIIAHNLCYSTLV--QDCNAERYPKDGLNHTPTGHYFVSRDVYPGVLPEVLQD 585
Query: 580 LLAARKRAKADLKEA-KDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL ARK A+ + KD LE VL+GRQLALK+SANSVYGFTGA VG+LPC+E+S+SVT
Sbjct: 586 LLLARKNARELMASVPKDSLEYKVLNGRQLALKVSANSVYGFTGAQVGRLPCLELSASVT 645
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPT-------VEAAMKL 691
+GR MI+ K VE + +VIYGDTDSVM+ + + +E AMK
Sbjct: 646 GFGRLMIDSAKSHVE-------SLDPRVKVIYGDTDSVMINYKSSSATTEKEQLEEAMKF 698
Query: 692 GREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRD 751
G+ AA+ +S F+ PI+LEFEKVY+PYLL++KKRYAGL WTN ++DK+DTKGIETVRRD
Sbjct: 699 GKMAAEKVSQEFLNPIRLEFEKVYFPYLLMNKKRYAGLLWTNTVQYDKLDTKGIETVRRD 758
Query: 752 NCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE 811
NC LV ++++ L++IL+ R AV++VK TI DLL+NR+D+S LVITK +K +Y
Sbjct: 759 NCPLVASVISGVLNRILIQRSEASAVEFVKGTIRDLLLNRLDISQLVITKTFSKAEVEYA 818
Query: 812 VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTH 871
AH+ L ERMRKRD A+AP +GDRV YVI++AAKGAKAYERSEDP+YVLENNIPIDT
Sbjct: 819 GAQAHIALVERMRKRDPASAPTIGDRVAYVIVRAAKGAKAYERSEDPLYVLENNIPIDTQ 878
Query: 872 YYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GIMKFAKRQLSCIGC 929
YYLE+Q+ PLLR+FE ++ N + LL G+HTR S+S PS + G+MKF K QL CI C
Sbjct: 879 YYLEHQLGPPLLRVFEGVIDNPAV-LLKGEHTRHFSVSAPSRNAGGLMKFVKFQLQCISC 937
Query: 930 KALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
+++I G LC C E+Y K +++ E ++ ++WTQCQ+CQGSL+Q+V+CTSRDC
Sbjct: 938 RSVIKEGALCDGCSHLGPEIYGKVIAKRNHYEAVYSQVWTQCQQCQGSLNQEVICTSRDC 997
Query: 990 PIFYRRKKAQKDMAEAKLQLDRW 1012
P+FY RKK QKD+ E + LDR+
Sbjct: 998 PVFYLRKKVQKDVLEQQALLDRF 1020
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 16/341 (4%)
Query: 76 ARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCK 135
+RP + S Y+S ++FQ LD GDS+ + + IIR++GVT+EG SV
Sbjct: 8 SRPSVPSDYLSS--DLLFQVLDCCQTQGDSHETISTVQHEDNPIIRLYGVTKEGFSVLVH 65
Query: 136 VHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-NRNSKVPQFVRHIEMVQKRSIMYY 194
+ FEPY +I P P+ + + Q L + + + + V IE+ +K+SIMYY
Sbjct: 66 CYNFEPYLWIKAP----PNWLPVYSQTLINELNSLLDPQTHLTGTVVRIEIHKKQSIMYY 121
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL--GMKSFMTYESNVLFALRFMIDCN 252
LKIVV LP + R +L G+ G+ +SF T+ESNV+F LRF++D
Sbjct: 122 TGNGMSDHLKIVVQLPQHIPKLRSLLSAGVACPGMWDNTRSFATFESNVIFPLRFLVDNK 181
Query: 253 IVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECA 312
I G NW+ + K+ K+ S CQ+E C + + S G + +APFRILS DIEC
Sbjct: 182 IGGCNWLTISKDKFVKSTVRTSTCQIEVCCSFDVLQSHDAVGHYLSIAPFRILSIDIECQ 241
Query: 313 GRKGHFPEPTHDPVIQVAN-LVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLL 371
GRKG FPE DPVIQ+AN + E P + V TL SCA I G V ++ETE ++LL
Sbjct: 242 GRKGLFPEAEKDPVIQIANHCINYGAETTPLTKTVFTLNSCAAIAGATVCAYETEEEMLL 301
Query: 372 AWRDFIREVDPDVMIGYNICKFDLPYLIEK------EDVHH 406
AW F++EVDPD++ GYNIC FD PYL+++ DV+H
Sbjct: 302 AWAQFLKEVDPDILTGYNICNFDFPYLLDRGSALAINDVYH 342
>gi|324120754|dbj|BAJ78768.1| DNA polymerase delta catalytic subunit [Chrysoperla nipponensis]
Length = 1052
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/619 (56%), Positives = 468/619 (75%), Gaps = 10/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH+ ISDL NG+ +TR RLAVYC+KDA LP R+L+ L N +E+ARV+GV I+
Sbjct: 433 QKEDVHHTQISDLFNGDEQTRHRLAVYCIKDAQLPLRILNHLNSFTNDMELARVSGVTIN 492
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
L++RG+ IKV++QLL +A+ ++P K G++ +EGATV+E G+Y PIATLD
Sbjct: 493 LLMTRGEQIKVVTQLLSQAQAAGYLMPVYKGQGTDD-QFEGATVIEPVRGYYTDPIATLD 551
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F SLYPSIMMA+NLCY+TL+ P + K L + + KTPS FVK +++G+LP ILE
Sbjct: 552 FNSLYPSIMMAHNLCYTTLLHPSNKDKFGLTEDQITKTPSNHFFVKPTVRRGLLPYILEN 611
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AK +L+ DP++K+VL+GRQLALK+SANSVYGFTGA G+LPC+EIS SVT+
Sbjct: 612 LLAARKKAKKELEAETDPVKKSVLNGRQLALKLSANSVYGFTGAQNGKLPCLEISGSVTA 671
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MIE T++ VE+K+T GYEHNA+VIYGDTDSVMV+FGV +E M+LGREAA Y+
Sbjct: 672 FGRTMIERTRQEVEEKYTMANGYEHNAQVIYGDTDSVMVKFGVKDLERCMELGREAAAYV 731
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FI PI+LEFEKVYYPYLLI+KKRYAGLY+T P+K+DKMD KGIETVRRDN LV N
Sbjct: 732 SAKFINPIRLEFEKVYYPYLLINKKRYAGLYYTKPDKYDKMDCKGIETVRRDNSPLVANT 791
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL K+L+ +D GA+++ K ISDLL NR+D+S L+I+K LTK ++Y K AHVEL
Sbjct: 792 INLCLQKLLIQKDPEGAIEHTKQVISDLLCNRIDISQLIISKELTK--NEYTAKQAHVEL 849
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A++M++RDA TAP +GDRVP+VII A K +AY+++EDPIYVLENNIPID YYL+NQ++
Sbjct: 850 AKKMKQRDAGTAPQLGDRVPFVIISATKNTRAYDKAEDPIYVLENNIPIDVDYYLQNQLA 909
Query: 880 KPLLRIFEPILKNASKE-LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----S 934
KPL+RIF+P+L + ++ LL G+HTRS + +T + F K++ C+GC+ ++
Sbjct: 910 KPLVRIFQPVLGDKAESILLRGEHTRSRNKATSKVGALFSFTKKREVCLGCRTVLPVEYE 969
Query: 935 NGTLCSHCKGREAELYCKT-VSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
LC HC E +Y + + + ++LE F RLWT+CQ CQGSLH++VLC+SRDCPIFY
Sbjct: 970 TEALCQHCLP-EKHIYLQNELCKQRQLEQNFSRLWTECQRCQGSLHEEVLCSSRDCPIFY 1028
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
RKK D+ + +++R+
Sbjct: 1029 MRKKVSIDLQSSAKRIERF 1047
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 200/344 (58%), Gaps = 18/344 (5%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP----LSSGSAAIIRIFGVT 126
R + RPP+ + + +FQQ+D+++ N + LP SG A+IR+FG+T
Sbjct: 19 RSDAYNRPPVPA-LKPEKDKFIFQQIDVEHY----NSQYLPGMPGPQSGGVAVIRMFGIT 73
Query: 127 REGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIE 184
+GHSV C VHGF YFY+ P I F + L M + +N+ V + V+ ++
Sbjct: 74 MDGHSVLCHVHGFLHYFYVVVPNAFDETHIKPFKEALNTVMMQDMKNNSDGVKECVQDVK 133
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFA 244
+V+K ++ Y Q F +I V LP MVA+ +L D G + +ESNV F
Sbjct: 134 LVEKLNLQGYVGDTKQKFAQIFVTLPKMVAAGARLLREAKVYDKFGYHDYQPFESNVDFD 193
Query: 245 LRFMIDCNIVGGNWIEVPVGKYRKTAKTLS-------YCQLEFDCLYSDIISRHPEGEFS 297
+RFM+D ++ G WIE+P G +R LS C E D +D+I+ PEGE+S
Sbjct: 194 IRFMVDKHVKGCCWIELPSGTWRHRPSPLSPGVHKESRCNFEVDVSCNDLIAHAPEGEWS 253
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
K+APF LSFDIEC RKG FPEP HD VIQ+AN+V G+ QP NV TLKSCAPI
Sbjct: 254 KVAPFYFLSFDIECDNRKGIFPEPEHDAVIQIANVVQRHGDAQPIYCNVYTLKSCAPIAH 313
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+V SFE E D+L AW +F+R++DPDV+ GYNI FDLPYL +
Sbjct: 314 AEVFSFEKEGDMLNAWAEFVRKLDPDVVTGYNINNFDLPYLTNR 357
>gi|268557320|ref|XP_002636649.1| Hypothetical protein CBG23360 [Caenorhabditis briggsae]
Length = 1081
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/622 (56%), Positives = 461/622 (74%), Gaps = 14/622 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H+II DLQ G+ +TRRRLA YCLKDAYLP RLLDKLM I NY+EMARVTGVP++
Sbjct: 455 QKEDVEHNIIPDLQRGDEQTRRRLAQYCLKDAYLPLRLLDKLMSIINYIEMARVTGVPMN 514
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL++GQ IK+LS +LR+ KQ N +P ++ + YEGATV++ GFY +PIATLD
Sbjct: 515 FLLTKGQQIKILSMMLRRCKQNNFFLPVIEANSGDGEGYEGATVIDPIRGFYNEPIATLD 574
Query: 520 FASLYPSIMMAYNLCYSTLV-TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM+A+NLCY+TL+ +P+ + +TPSG+ F + ++G+LPEILE
Sbjct: 575 FASLYPSIMIAHNLCYTTLLKSPQGVENKDYI-----RTPSGQYFATKSKRRGLLPEILE 629
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+LLAARKRAK D+K KD ++ V +GRQLALKISANSVYGFTGATVG+LPC+EIS SVT
Sbjct: 630 DLLAARKRAKNDMKNEKDEFKRMVYNGRQLALKISANSVYGFTGATVGKLPCLEISQSVT 689
Query: 639 SYGRQMIEHTKKLVE---DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
++GR+MI+ TK VE K G +A+VIYGDTDSVMV+FGV V AM++G EA
Sbjct: 690 AFGRKMIDMTKSEVERIYKKGALDGKCPADAKVIYGDTDSVMVKFGVENVAQAMEIGLEA 749
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A +S F PIKLEFEKVY+PYLLI+KKRYAGLY+T PE DKMD KG+ETVRRDNC L
Sbjct: 750 AKEVSKIFTPPIKLEFEKVYFPYLLINKKRYAGLYFTKPEVHDKMDCKGLETVRRDNCPL 809
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V ++ CL K+L+DRD A+ + K TISDLL N++D+SLL+I+K LTK+GD Y+ K A
Sbjct: 810 VAKVLGVCLEKLLIDRDQQSALDFAKKTISDLLCNKIDISLLIISKELTKSGDKYQAKQA 869
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
HVELA RM+KRDA +AP +GDRVPYV + AAK AYER+EDP +VL+NNIP+DT +YL
Sbjct: 870 HVELAARMKKRDAGSAPRLGDRVPYVFVAAAKNVPAYERAEDPTFVLQNNIPLDTKHYLT 929
Query: 876 NQISKPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI- 933
NQ++KPL RIFEPIL + A K L+ G+HTR ++ G+ F K+ +C+GCK+++
Sbjct: 930 NQLAKPLARIFEPILGDRAEKILVEGEHTRVRTVVQSKVGGLAAFTKKSATCLGCKSVLP 989
Query: 934 ---SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
S +C HC+ + E+Y ++ + ELE FGRLWT+CQ C ++ V C++RDCP
Sbjct: 990 KMESENAVCKHCEPKLPEIYASRLTTMHELENHFGRLWTECQNCAKTMQDKVNCSARDCP 1049
Query: 991 IFYRRKKAQKDMAEAKLQLDRW 1012
I+Y R+K + +++EA + R+
Sbjct: 1050 IYYMREKVRNELSEANTVMQRF 1071
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 192/343 (55%), Gaps = 20/343 (5%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
WARP + + ++I Q L+++ D + ++ ++++GVT+ G+S+C
Sbjct: 47 WARPAVEKD-LGITKNIACQVLEVETYHEDGSATTYDRTN-----VKLYGVTKAGNSICV 100
Query: 135 KVHGFEPYFYISCPQGMGPDDI-----SHFHQILEGRMREANRNSKVPQFVR----HIEM 185
V + P+FY PQG G + I + + + + R + +++P V H+E+
Sbjct: 101 IVTDYFPHFYFQAPQGFGVEHIGVAQSAICNMVAAAKRRGGSGQTQLPGNVVDNLVHLEI 160
Query: 186 VQKRSIMYYQQQKSQ-PFLKIVVALPTMVASCRGILDRGIQLDGLG-MKSFMTYESNVLF 243
V ++ Y++ ++ PF+K+ + + R L G+ L G G + YESN+
Sbjct: 161 VHGENLYYFRGADTKVPFVKVTGSTEAL-NKARQELKNGVNLMGKGPVNVGNLYESNINA 219
Query: 244 ALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAP 301
+ F+ NI G WIE+P GK + ++ S CQ+E ++I +GE++ +AP
Sbjct: 220 VVMFLAKTNIAGCGWIEIPAGKCKILPNSEKSSRCQIEVSINVKNLIVHESDGEWAGIAP 279
Query: 302 FRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVM 361
R LS DIEC GR+G FPE DP+IQ+ANLV ++GE +PF+RN L +CA +VG +++
Sbjct: 280 IRTLSLDIECIGRRGIFPEAIKDPIIQIANLVKVEGESEPFVRNCFVLGTCAHVVGSNII 339
Query: 362 SFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
E+ +L W +F+REVDPD++ GYNI FDLPY++++ V
Sbjct: 340 ECVNEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKV 382
>gi|170574522|ref|XP_001892851.1| DNA polymerase delta catalytic subunit [Brugia malayi]
gi|158601393|gb|EDP38315.1| DNA polymerase delta catalytic subunit, putative [Brugia malayi]
Length = 1084
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/620 (56%), Positives = 466/620 (75%), Gaps = 9/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV +S+I+DLQNGNA TRRRLA+YC+KDAYLP +LL KLM I NY+EMARVTGVP+
Sbjct: 462 QKEDVDYSMIADLQNGNAFTRRRLAIYCMKDAYLPLKLLQKLMSIINYIEMARVTGVPLD 521
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQ+LRKAK + +P + ++ TYEGATV++ GFY PIATLD
Sbjct: 522 YLLSRGQQVKVMSQILRKAKSLHFFLPVIDIVQADD-TYEGATVIDPIRGFYNTPIATLD 580
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIM+A+NLCY+TL+ +A NL V TPS FVKSN+++G+LP++LE+
Sbjct: 581 FASLYPSIMIAHNLCYTTLIRGSNASH-NLSDSDVEVTPSNNRFVKSNIRRGLLPQVLED 639
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AK DLK +DP + VL+GRQLALKISANSVYGFTGA+VG+LPC+EIS SVT+
Sbjct: 640 LLNARKQAKNDLKNEQDPFRRMVLNGRQLALKISANSVYGFTGASVGKLPCLEISQSVTA 699
Query: 640 YGRQMIEHTKKLVEDKFTTV---GGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
YGRQMI+ TK VE + G +A+VIYGDTDSVMV+FGV V+AAM+LG AA
Sbjct: 700 YGRQMIDLTKSAVEQIYKEGYLDGKCPCDAQVIYGDTDSVMVKFGVKDVKAAMELGLHAA 759
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
+S FI PIKLEFEKVY P+LLI+KKRYAGLY+T PEK DK+D KG+ETVRRDNC LV
Sbjct: 760 TEVSKKFIPPIKLEFEKVYSPFLLINKKRYAGLYFTRPEKHDKIDCKGLETVRRDNCPLV 819
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+++ CL K+L++ D A+++ K ISDLL NR+D+S L+ITK LT++ + Y K AH
Sbjct: 820 SKVLSTCLEKMLLEGDATSALEHAKKVISDLLCNRIDISELIITKELTRSSNAYAAKQAH 879
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
V LAERMR+RD+ +AP +GDRVPYVI+ + AYE++EDPIYVL+NNIPIDT YYLEN
Sbjct: 880 VVLAERMRERDSGSAPRLGDRVPYVIVAKGQKVPAYEKAEDPIYVLQNNIPIDTAYYLEN 939
Query: 877 QISKPLLRIFEPILKNASKELL-SGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN 935
Q++KPL RIFEPIL + ++ +L +G HT ++ SG+ +F ++ C+ CK+ + N
Sbjct: 940 QLAKPLARIFEPILGDKAESILTTGVHTLVRTVVQSKKSGLSQFFQKTERCLSCKSSLPN 999
Query: 936 GT---LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G C+HCK E +++ ++ + +E F RLWT+CQ C G+++++VLC++RDCPIF
Sbjct: 1000 GVSDATCAHCKPNEGKVFITHLALMNAIENRFARLWTECQNCSGTMNEEVLCSARDCPIF 1059
Query: 993 YRRKKAQKDMAEAKLQLDRW 1012
Y R+K + D+AE L R+
Sbjct: 1060 YMREKVRYDLAEQMKSLQRF 1079
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 192/337 (56%), Gaps = 21/337 (6%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
WARPP+ + + I FQ +D+DY + N +IR+FG T +S+C
Sbjct: 60 WARPPIPDELYMRPE-IDFQVVDVDYYMNIENN----------IVIRLFGATANQNSICV 108
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQFVRHI----EMVQKR 189
+VHGF PYFY+ + I + + L ++ + N +P+ V ++ ++V
Sbjct: 109 QVHGFLPYFYVLLESRFDEEHIEYAKKYLNDIVKAQVPANIGIPKNVENLVVDLDIVHGA 168
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQL-DGLGMKSFMTYESNVLFALRFM 248
++ Y++ +Q FLK+ V P ++ CR + G+ L G M+S +E+N+ F +RFM
Sbjct: 169 NVYEYKKDLNQKFLKVYVCSPKLLNLCRRVFTNGVNLIKGGQMESLSCFETNIDFEIRFM 228
Query: 249 IDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGE--FSKMAPFRI 304
D N+VG W+ +P KY + +S CQ E +D++ PE +S +AP RI
Sbjct: 229 TDHNLVGCAWVTLPSEKYLIVEGKDMISRCQFECSINNTDLVIHSPESSPRWSSIAPLRI 288
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIEC R+G FPE D VIQ+AN+V ++GE +PFIRN + AP++G +++ +
Sbjct: 289 LSFDIECTNRQGIFPEAHTDAVIQIANMVKIEGENEPFIRNCFVIGETAPVIGSEIIVSK 348
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+E ++L W +F+R VDPD++ GYNI FD PY++E+
Sbjct: 349 SEEELLNKWAEFVRTVDPDLITGYNIQNFDFPYIVER 385
>gi|312081845|ref|XP_003143198.1| DNA-directed DNA polymerase III [Loa loa]
gi|307761639|gb|EFO20873.1| DNA-directed DNA polymerase III [Loa loa]
Length = 1084
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/620 (56%), Positives = 462/620 (74%), Gaps = 9/620 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV +++I+DLQNGNA TRRRLA+YC+KDAYLP +LL KLM + NY+EMARVTGVP+
Sbjct: 462 QKEDVDYAMIADLQNGNALTRRRLAIYCMKDAYLPLKLLQKLMSVINYIEMARVTGVPLD 521
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQ+LRKAK + +P V TYEGATV++ GFY PIATLD
Sbjct: 522 YLLSRGQQVKVMSQILRKAKSMHFFLP-VIDVVQPDDTYEGATVIDPIRGFYNTPIATLD 580
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIM+A+NLCY+TL+ A NL TPS FVK N++ G+LP++LE+
Sbjct: 581 FASLYPSIMIAHNLCYTTLIRRPIA-SYNLSDSDFEVTPSNNRFVKPNIRHGLLPQVLED 639
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AK DLK +DP + VL+GRQLALKISANSVYGFTGA+VG+LPC+EIS SVT+
Sbjct: 640 LLNARKQAKNDLKNEQDPFRRMVLNGRQLALKISANSVYGFTGASVGKLPCLEISQSVTA 699
Query: 640 YGRQMIEHTKKLVEDKFTTV---GGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
YGRQMI+ TK VE+ + G +A+VIYGDTDSVMV+FGV V+AAM+LG AA
Sbjct: 700 YGRQMIDLTKNAVEEIYKEGYLDGKCPCDAQVIYGDTDSVMVKFGVKDVKAAMELGLHAA 759
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
+S FI PIKLEFEKVY P+LLI+KKRYAGLY+T PEK DK+D KG+ETVRRDNC LV
Sbjct: 760 TEVSKKFIPPIKLEFEKVYSPFLLINKKRYAGLYFTRPEKHDKIDCKGLETVRRDNCPLV 819
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+++ CL K+L++ D A+++ K ISDLL NR+D+S L+ITK LT++ + Y K AH
Sbjct: 820 SKVLSTCLEKMLLEGDATSALEHAKKVISDLLCNRIDISELIITKELTRSSNAYAAKQAH 879
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
V LAERMR+RD+ +AP +GDRVPYVI+ + AYE++EDPIYVL+NNIPIDT YYLEN
Sbjct: 880 VVLAERMRERDSGSAPRLGDRVPYVIVAKGQKVPAYEKAEDPIYVLQNNIPIDTAYYLEN 939
Query: 877 QISKPLLRIFEPILKNASKELL-SGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN 935
Q++KPL RIFEP+L + ++ +L +G HT ++ NSG+ +F ++ C+ CK+ + N
Sbjct: 940 QLAKPLARIFEPVLGDKAESVLTTGVHTLVRTVVQSKNSGLSQFFQKTERCLSCKSSLPN 999
Query: 936 GT---LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
G C+HCK E ++Y ++ + +E F RLWT+CQ C G+++++VLC+SRDCPIF
Sbjct: 1000 GVTDATCTHCKPNEGKVYITHLALMNAIENRFARLWTECQNCSGTMNEEVLCSSRDCPIF 1059
Query: 993 YRRKKAQKDMAEAKLQLDRW 1012
Y R+K + D+AE L R+
Sbjct: 1060 YMREKVRYDLAEQMKSLQRF 1079
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 190/337 (56%), Gaps = 21/337 (6%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
WARPP+ ++ + I FQ +D+DY + N IR+FG T +SVC
Sbjct: 60 WARPPIPDELHTKPE-IDFQVVDVDYYMNSENN----------VTIRLFGATTNQNSVCV 108
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ----FVRHIEMVQKR 189
+VHGF PYFY+ I + + L ++ + N +P+ V +++V
Sbjct: 109 QVHGFLPYFYVLLEIPFDETHIEYAKKYLNDVIKAQVPANIGIPKNVDNLVVDLDIVYGA 168
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG-MKSFMTYESNVLFALRFM 248
SI Y++ +Q FLK+ V P ++ CR + G+ L G +S +E+N+ F +RFM
Sbjct: 169 SIYEYKKDLNQKFLKVYVCSPKLLNLCRRVFTNGVSLTKGGRTESLSCFETNIDFEIRFM 228
Query: 249 IDCNIVGGNWIEVPVGKYRKTA--KTLSYCQLEFDCLYSDIISRHPEGE--FSKMAPFRI 304
D N+VG W+ +P KYR + +S+CQ E +D++ PE +S +AP RI
Sbjct: 229 TDHNLVGCAWVTLPSKKYRIVTGKEMISHCQFECSINNTDLVIHSPESSPRWSSIAPLRI 288
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIEC R+G FPE D VIQ+AN+V ++GE +PFIRN + AP++G ++ +
Sbjct: 289 LSFDIECTNRQGIFPEAHTDAVIQIANMVKIEGENEPFIRNCFVIGETAPVIGSQIIVSK 348
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+E ++L W +F+R VDPD++ GYNI FD PY++E+
Sbjct: 349 SEEELLNKWAEFVRIVDPDLITGYNIQNFDFPYIVER 385
>gi|300122468|emb|CBK23038.2| unnamed protein product [Blastocystis hominis]
Length = 850
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/617 (56%), Positives = 464/617 (75%), Gaps = 9/617 (1%)
Query: 401 KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISF 460
KEDV ++ I +L NG+ TR+R+A YC+KDA+LPQ+LLDKL I N VEMARVTGVPI+
Sbjct: 238 KEDVKYNQIKELFNGDDVTRQRIASYCVKDAWLPQQLLDKLNVIINQVEMARVTGVPINM 297
Query: 461 LLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDF 520
LLSRGQ IKVLS + RK+ Q +IP + ++ + YEGATV+E + G+YE+PIATLDF
Sbjct: 298 LLSRGQQIKVLSMIHRKSLQLGYIIPTLDRSNQSE-KYEGATVIEPKKGYYEEPIATLDF 356
Query: 521 ASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEEL 580
ASLYPSIM+A+N+CYSTL+ P+ + + V ++P+G F+K + ++G+LP IL EL
Sbjct: 357 ASLYPSIMIAHNICYSTLI-PDS---MEIDESRVERSPTGNRFLKKSEREGVLPIILREL 412
Query: 581 LAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSY 640
LAARK AK D+ + DPL+KAV +GRQLALK+SANSVYGFTGATVGQLPC+ IS +VTSY
Sbjct: 413 LAARKVAKKDMAKETDPLKKAVQNGRQLALKVSANSVYGFTGATVGQLPCLAISRTVTSY 472
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
GR MIE T++ V +++ GYEH+A ++YGDTDSVMV+FGV TVE AMKLG+EAA+Y+S
Sbjct: 473 GRAMIEMTQRKVMERYCIKNGYEHDAMIVYGDTDSVMVKFGVKTVEEAMKLGKEAAEYVS 532
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLV 760
G F P++LEFEKVY+PYLL++KKRYAGL+WT PEK+DK+D KGIETVRRDNC LV+ LV
Sbjct: 533 GFFPDPVRLEFEKVYFPYLLMNKKRYAGLFWTKPEKWDKLDAKGIETVRRDNCRLVRILV 592
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD----YEVKAAH 816
CL K+L+DR AV+YVKST+S LL N++D+SLLVITK L K DD Y+ KAAH
Sbjct: 593 DTCLKKLLIDRSPEDAVEYVKSTLSALLQNQIDISLLVITKALGKKADDDGKGYKAKAAH 652
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELA+RM +RD +AP VGDRV YVII+ KGAKAY +SEDPIYVLENN+ ID ++YLE+
Sbjct: 653 VELAKRMAQRDPGSAPKVGDRVAYVIIEKDKGAKAYTKSEDPIYVLENNLQIDVNWYLEH 712
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG 936
Q+ P+ RIF + + EL G+H + NSGI +F KR+ +C+ CK + G
Sbjct: 713 QLRGPIERIFAVLKNHTLDELFKGEHMNVKKVVVVQNSGIGQFVKRKNTCMHCKRPLQKG 772
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
+CS+CK E+ Y +T QV+ + F LWT CQ CQ SLH+ ++C ++DCPI+Y+R+
Sbjct: 773 AVCSNCKSFESAHYIETAMQVELQQRQFCELWTTCQRCQNSLHKSIICGNKDCPIYYQRE 832
Query: 997 KAQKDMAEAKLQLDRWN 1013
K + ++ + +L+R++
Sbjct: 833 KIRHELDVSTKKLERFS 849
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 100/158 (63%), Gaps = 7/158 (4%)
Query: 248 MIDCNIVGGNWIEVPVGKYRKTAKT-------LSYCQLEFDCLYSDIISRHPEGEFSKMA 300
M+D NIVG NW+++ G YR + + + CQ E D + SD++S + +FS +A
Sbjct: 1 MVDHNIVGCNWLQLNPGNYRLLSPSEKANYCIRTMCQYECDVICSDVVSLPTKDDFSLIA 60
Query: 301 PFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDV 360
PFRILSFDIEC +G FP P D VI +AN+VT QG +P ++V TL+ CA I GVDV
Sbjct: 61 PFRILSFDIECCAEEGGFPSPEKDAVITIANVVTEQGSTEPLFKSVFTLRGCASIPGVDV 120
Query: 361 MSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
FE E+D+L AW ++ D D++ GYNI FD+ YL
Sbjct: 121 YCFEDEKDMLAAWSKYLVACDADIITGYNIQNFDIDYL 158
>gi|324500650|gb|ADY40299.1| DNA polymerase delta catalytic subunit [Ascaris suum]
Length = 1091
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/624 (56%), Positives = 462/624 (74%), Gaps = 13/624 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV +S+I+DLQNG TRRRLAVYC+KDAYLP RLL KLM + NY+EMARVTGVP+
Sbjct: 469 QKEDVDYSLIADLQNGTPLTRRRLAVYCMKDAYLPLRLLQKLMSVINYIEMARVTGVPLD 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLRKAK + +P V A T+EGATV+E GFY PIATLD
Sbjct: 529 YLLSRGQQVKVMSQLLRKAKSHHFFVP-VMDAAQTDDTFEGATVIEPIRGFYAVPIATLD 587
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPS+M+A+N+CY+TL+ + + + L + +PS FVK+N+++G+LPEILE+
Sbjct: 588 FASLYPSVMIAHNICYTTLIQGQPSAQ-GLKEDDFEVSPSNNRFVKANVRRGLLPEILED 646
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKADLK KDP VL+GRQLALKISANSVYGFTGATVG+LPC++IS SVT+
Sbjct: 647 LLSARKRAKADLKNEKDPFRCMVLNGRQLALKISANSVYGFTGATVGKLPCLQISQSVTA 706
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEH-----NAEVIYGDTDSVMVQFGVPTVEAAMKLGRE 694
+GRQMI+ TK VE+ + GY + +A+VIYGDTDSVMV+FGV + AM+LG+
Sbjct: 707 FGRQMIDFTKNTVEEIYKK--GYLNGKCPCDAKVIYGDTDSVMVKFGVKDIALAMELGQH 764
Query: 695 AADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCL 754
AA +S F PIKLEFEKVY P+LLI+KKRYAGLY+T PEK DKMD KG+ETVRRDNC
Sbjct: 765 AAVEVSKKFRSPIKLEFEKVYCPFLLINKKRYAGLYFTRPEKHDKMDCKGLETVRRDNCP 824
Query: 755 LVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA 814
LV +++ CL K+L++ D GA+++ K ISDLL NR+D+S L+I+K LT+ Y+ K
Sbjct: 825 LVSKVLSACLEKMLLEGDAKGALEHAKKVISDLLCNRIDISELIISKELTRQSTAYQAKQ 884
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYL 874
AHV LA+RMR RDA +AP +GDRVPYVI+ + AYE++EDPIYVL+NNIPIDT YYL
Sbjct: 885 AHVVLADRMRLRDAGSAPRLGDRVPYVIVAKGQKVPAYEKAEDPIYVLQNNIPIDTSYYL 944
Query: 875 ENQISKPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI 933
ENQ++KPL RIFEPIL + A L++G+HT S++ S + +F ++ C+ CK+ +
Sbjct: 945 ENQLAKPLARIFEPILGDKAESALINGEHTLVRSVTQSKVSALSQFFQKTERCLLCKSSL 1004
Query: 934 SNGTL---CSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
G + C+HCK E + Y ++ + E FGRLWT+CQ C G+ ++++LC+SRDCP
Sbjct: 1005 KKGVMDATCAHCKPNEGKAYITHMALMNATENRFGRLWTECQNCAGTDNEEILCSSRDCP 1064
Query: 991 IFYRRKKAQKDMAEAKLQLDRWNF 1014
IFY R+K + D+ E L R+N
Sbjct: 1065 IFYMREKVRLDLDEQMKALKRFNL 1088
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 195/353 (55%), Gaps = 28/353 (7%)
Query: 60 RDIEQRQDFASRLAKWARPPLSSGYVSQCQ-SIMFQQLDIDYVIGDSNRELLPLSSGSAA 118
+DI+Q+ + WARPPL G Q I Q +DIDY + +
Sbjct: 57 QDIQQKSN-------WARPPLPDGIGEGSQLDIALQVIDIDYFMDQRDD----------V 99
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS---- 174
++R+FGV+ +G+S+C +VH F PYFY+ P+ I ++L ++ A +
Sbjct: 100 VVRLFGVSMDGNSLCVQVHAFVPYFYVLVGDSFLPEYIERAKKVLNDNVKNAASSGIGIP 159
Query: 175 -KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
V V +E+ I Y++ Q FLK+ V P + CR I GI L G G +S
Sbjct: 160 KGVENLVVDLELTTGADIYGYRKNLKQKFLKVFVRTPKLFPICRRIFQEGIDLYGKGERS 219
Query: 234 FMT-YESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT--AKTLSYCQLEFDCLYSDIISR 290
++ +E+NV F +RFM+D +VG W+ +P KY + +S CQLE ++D++
Sbjct: 220 SLSCFEANVDFEIRFMVDLGLVGCGWVVLPSRKYDVVPEGQMVSRCQLECTIKFTDVVVH 279
Query: 291 HPEG--EFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMT 348
PE E+S +AP RILSFDIEC R+G FPE D VIQ+AN+V ++G PFIRN
Sbjct: 280 APESAPEWSAIAPLRILSFDIECTNRRGIFPEAHTDAVIQIANMVKVEGGTDPFIRNCFV 339
Query: 349 LKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ P++G D++ E ++L W +F+R +DPD++ GYNI FD+PY+I++
Sbjct: 340 IGDTTPVIGSDIIVCRNEHELLEKWAEFVRILDPDIVTGYNIQNFDIPYIIDR 392
>gi|340502511|gb|EGR29193.1| hypothetical protein IMG5_161090 [Ichthyophthirius multifiliis]
Length = 1092
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/641 (56%), Positives = 468/641 (73%), Gaps = 34/641 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH+ IS LQ GN+ETR+RLA+YCLKD+ LP +L+ KLM I+NY EMARVTGVPI+
Sbjct: 455 QKEDVHHTQISVLQEGNSETRKRLAIYCLKDSQLPLKLMQKLMCIYNYTEMARVTGVPIN 514
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG-TYEGATVLEARAGFYEKPIATL 518
+L RGQ IKV SQL RKAK + IP + G QG +EGA VLE + GFY KPIATL
Sbjct: 515 YLFVRGQQIKVASQLYRKAKLCKMFIPTERSKG--QGDKFEGAFVLEPKRGFYSKPIATL 572
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DFASLYPSIMMA+NLCYSTL+T + K+N + TP+G+ FVK +++KGILPEIL+
Sbjct: 573 DFASLYPSIMMAHNLCYSTLITRDITLKMN--KDDYTATPNGDYFVKPHIRKGILPEILK 630
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARK+AK DL + DPL+KAVLDGRQLALKISANSVYGFTGA +GQLPC++ISSSVT
Sbjct: 631 ELLNARKKAKNDLTQETDPLKKAVLDGRQLALKISANSVYGFTGAQLGQLPCLQISSSVT 690
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GR MIE T+ V + F+ GYE++++VIYGDTDSVMVQFGVPT++ AM LG+EAA
Sbjct: 691 SFGRNMIEGTRDFVLEHFSKKNGYEYDSDVIYGDTDSVMVQFGVPTIQEAMNLGKEAASL 750
Query: 699 ISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
I+ FI PIKLEFEKVY PYLLI+KKRYAGLY+T P+K+DK+DTKG+E VRRDNC +++
Sbjct: 751 ITKKLFINPIKLEFEKVYCPYLLINKKRYAGLYFTKPDKYDKIDTKGMENVRRDNCQMIR 810
Query: 758 NLVTECLHKILVDRDIPG---AVQYVKSTISDLLMNRMDLSLLVITKGLTKTG------- 807
+++ CL +LV+ + G A++Y+K +SDL N++D+S LVITK LTK
Sbjct: 811 DIMNNCLKYVLVEFNNNGVEKAIEYIKGMVSDLYQNKIDISKLVITKSLTKKAQEGDDED 870
Query: 808 ---------DDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDP 858
D Y+ K AHVELA++M RDA +AP++GDR+P+VII +K AK YE+ EDP
Sbjct: 871 DENEKKTNKDQYKSKQAHVELAKKMALRDAGSAPSIGDRIPFVIIAGSKNAKNYEKVEDP 930
Query: 859 IYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GI 916
IYV+ ++IP+D YY+E QI KPL+RIFE I+KN L G+HT+ I N+ G+
Sbjct: 931 IYVVNHDIPLDYDYYIEKQIKKPLIRIFEHIMKNPD-TLFQGEHTK-IRYQPKLNAGLGL 988
Query: 917 MKFAKRQLSCIGCKALISNG-TLCSHCKG----REAELYCKTVSQVQELEVLFGRLWTQC 971
KF ++ +C+ CK + N LC +C G R E+Y + + Q +E F +LWT+C
Sbjct: 989 GKFVVKKETCLYCKCQVPNKEALCQNCVGKNNNRIVEIYTEKLIMHQSIEYQFNQLWTEC 1048
Query: 972 QECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRW 1012
Q CQGSLH DV+C +RDCPI+Y+R K Q D+ ++ ++R+
Sbjct: 1049 QRCQGSLHDDVICQNRDCPIYYKRTKTQGDLMRSQEIINRF 1089
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 206/379 (54%), Gaps = 34/379 (8%)
Query: 44 FLD--ETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYV 101
FLD E + PEDE+ + D + ++ ++ K+ RP + S ++ I F LD DY
Sbjct: 12 FLDYIEEVQPEDEQDIDFED-KDLENLTNK--KYRRPEVDSLKINNYNDIHFMLLDTDYY 68
Query: 102 I---GDSNR-----ELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGP 153
+ G+S + E +P A IIR++GVT++ +S+ V G +PY YI P+ +
Sbjct: 69 VINQGESIKTGEKVEDVP----KAPIIRLYGVTKDQNSIMIHVKGKDPYLYIQIPKNILV 124
Query: 154 DDISHFHQILEGRMREANRNS------KVPQFVRHIEMVQKRSIMYYQQQ--KSQPFLKI 205
+++ +LE E N+ S K F++ IE+ + SI ++ + + + FLKI
Sbjct: 125 NEM-----LLENLKNELNKQSINMRSVKSKYFIKKIEITEGESIKNFKGKDYEIETFLKI 179
Query: 206 VVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGK 265
LP V++ RGI ++G + + ++ESN+ F+LRFMID +IVG WI +
Sbjct: 180 YTFLPAHVSTLRGIFEKGFHFESIQFPR-TSFESNMPFSLRFMIDKDIVGMGWINLKKNM 238
Query: 266 Y--RKTAKTLSYCQLEFDCLYSDIISRHPE-GEFSKMAPFRILSFDIECAGRKGHFPEPT 322
+ R K S CQ+E D ++ + E ++AP RI SFDIEC + G FP
Sbjct: 239 FEIRSIDKHKSRCQIEIDIHQDNLEAMDINLPECIEIAPLRIFSFDIECQAKDGGFPNAQ 298
Query: 323 HDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDP 382
DP+IQ++ ++ + ++ ++ V T+ SC+ I G V S+E E D+L W F++ VDP
Sbjct: 299 KDPIIQISTVLKIHDQQDDLVKTVFTIGSCSNIPGCIVKSYEKEEDLLKEWEIFMQFVDP 358
Query: 383 DVMIGYNICKFDLPYLIEK 401
D+ +GYNI FD PY+ ++
Sbjct: 359 DIYLGYNIINFDFPYIFDR 377
>gi|17559488|ref|NP_506017.1| Protein F10C2.4 [Caenorhabditis elegans]
gi|13124199|sp|P90829.1|DPOD1_CAEEL RecName: Full=DNA polymerase delta catalytic subunit
gi|3875739|emb|CAB04077.1| Protein F10C2.4 [Caenorhabditis elegans]
Length = 1081
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/622 (55%), Positives = 460/622 (73%), Gaps = 14/622 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H+II DLQ G+ +TRRRLA YCLKDAYLP RLLDKLM I NY+EMARVTGVP++
Sbjct: 455 QKEDVEHNIIPDLQRGDEQTRRRLAQYCLKDAYLPLRLLDKLMSIINYIEMARVTGVPMN 514
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLL++GQ IK+LS +LR+ KQ N +P ++ + YEGATV++ GFY +PIATLD
Sbjct: 515 FLLTKGQQIKILSMMLRRCKQNNFFLPVIEANSGDGEGYEGATVIDPIRGFYNEPIATLD 574
Query: 520 FASLYPSIMMAYNLCYSTLV-TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM+A+NLCY+TL+ +P+ E +TPSG+ F + ++G+LPEILE
Sbjct: 575 FASLYPSIMIAHNLCYTTLLKSPQGVEN-----EDYIRTPSGQYFATKSKRRGLLPEILE 629
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
++LAARKRAK D+K KD ++ V +GRQLALKISANSVYGFTGATVG+LPC+EIS SVT
Sbjct: 630 DILAARKRAKNDMKNEKDEFKRMVYNGRQLALKISANSVYGFTGATVGKLPCLEISQSVT 689
Query: 639 SYGRQMIEHTKKLVE---DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
++GR+MI+ TK VE K G +A+VIYGDTDSVMV+FGV TV AM++G +A
Sbjct: 690 AFGRKMIDMTKLEVERIYKKGALDGKCPADAKVIYGDTDSVMVKFGVETVAQAMEIGLDA 749
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A +S F PIKLEFEKVY PYLLI+KKRYAGLY+T P+ DKMD KG+ETVRRDNC L
Sbjct: 750 AKEVSKIFTPPIKLEFEKVYSPYLLINKKRYAGLYFTKPDVHDKMDCKGLETVRRDNCPL 809
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V ++ CL K+L++RD A+ + K TISDLL N++D+SLL+I+K LTK+GD Y+ K A
Sbjct: 810 VAKVLGVCLEKLLIERDQQSALDFAKRTISDLLCNKIDISLLIISKELTKSGDKYQAKQA 869
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
HVELA RM+KRDA +AP +GDRVPYV + AAK AYER+EDP +VL+NNIP+DT +YL
Sbjct: 870 HVELAARMKKRDAGSAPRLGDRVPYVFVAAAKNVPAYERAEDPTFVLQNNIPLDTKHYLT 929
Query: 876 NQISKPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI- 933
NQ++KPL RIFEPIL + A K L+ G+HTR ++ G+ F + +C+GCK+++
Sbjct: 930 NQLAKPLARIFEPILGDRAEKILVEGEHTRVRTVVQSKVGGLAAFTTKSATCLGCKSVLP 989
Query: 934 ---SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
S +C HC+ + ++ ++ + ELE FGRLWT+CQ C ++ V C++RDCP
Sbjct: 990 RAESENAVCKHCEPKLPTIFASRMNTMHELENHFGRLWTECQNCAKTMQDKVNCSARDCP 1049
Query: 991 IFYRRKKAQKDMAEAKLQLDRW 1012
I+Y R+K + +++EA ++R+
Sbjct: 1050 IYYMREKVRNELSEASAVIERF 1071
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 190/343 (55%), Gaps = 20/343 (5%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
WARP + + +SI Q L+++ D + +S ++++GVT+ G+S+C
Sbjct: 47 WARPAVDKD-LGISKSIACQILEVETYHEDGS-----ATSYDRTNVKLYGVTKSGNSICV 100
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS---------KVPQFVRHIEM 185
V + P+FY PQG G + I + + A R KV + H+E+
Sbjct: 101 IVTDYFPHFYFQAPQGFGVEHIGTAQSAICNMVAAAKRRGGSGQAQLPGKVVDNLVHVEI 160
Query: 186 VQKRSIMYYQQQKSQ-PFLKIVVALPTMVASCRGILDRGIQLDGLG-MKSFMTYESNVLF 243
V ++ Y++ ++ PF+K+ + + R L G+ L G G + YESN+
Sbjct: 161 VHGENLYYFRGADTKVPFVKVSGSTEAL-HKARMELKNGVNLMGKGPVNVGNLYESNINV 219
Query: 244 ALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAP 301
+ F+ NIVG WIE+P GK R ++ S CQ+E ++I +GE++ +AP
Sbjct: 220 IVMFLAKTNIVGCGWIEIPAGKCRILSNSEKSSRCQIEVTVPVKNLIVHESDGEWAGIAP 279
Query: 302 FRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVM 361
R LS DIEC GR+G FPE DP+IQ+ANLV ++GE +PF+RN L +CAP+VG +++
Sbjct: 280 IRTLSLDIECIGRRGVFPEAIKDPIIQIANLVKIEGEAEPFVRNCFVLGTCAPVVGSNII 339
Query: 362 SFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
E+ +L W +F+REVDPD++ GYNI FDLPY++++ V
Sbjct: 340 QCVNEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKV 382
>gi|328865112|gb|EGG13498.1| DNA polymerase delta catalytic subunit [Dictyostelium fasciculatum]
Length = 1801
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/618 (55%), Positives = 466/618 (75%), Gaps = 10/618 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SII+DLQNG + RRRLAVYC+KDA LP +LLDKLM + NY EM+RVTGVP+S
Sbjct: 1187 QKEDVHYSIIADLQNGTDDDRRRLAVYCIKDAQLPLKLLDKLMILINYAEMSRVTGVPLS 1246
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RG+ IKV+SQL RKA +++L++P K+ +++GA V++ + GFY++PIATLD
Sbjct: 1247 YLLGRGEGIKVVSQLYRKAMEEDLLLP-TKRVSDVDVSFQGAYVIDPQVGFYDEPIATLD 1305
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F SLYPSIMMA+NLCY+TL+T D K++ P TPSG F+K + +KGILP+ILEE
Sbjct: 1306 FTSLYPSIMMAHNLCYTTLLTAADKEKVD--PNDYTLTPSGSAFIKPSHRKGILPKILEE 1363
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AK DLK KDP ++AVLDGRQLALKISANSVYGFTGA VG+LPC++IS SVT+
Sbjct: 1364 LLGARKKAKDDLKNEKDPFKRAVLDGRQLALKISANSVYGFTGARVGKLPCLDISRSVTA 1423
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR M++ TK VE+ +T GYE++A++IYGDTDSVMV+FGV TV A++LGR+A+ I
Sbjct: 1424 FGRVMLDTTKNYVENTYTIANGYENDAKIIYGDTDSVMVKFGVKTVAEAIELGRKASKEI 1483
Query: 700 SG-TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+ FI+PI L+FEKVYYPYLLI+KKRYAGL+WT + DKMD KG+E VRRDNC LV+
Sbjct: 1484 TAKCFIRPINLDFEKVYYPYLLINKKRYAGLFWTKTDTHDKMDVKGLEVVRRDNCPLVRM 1543
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
+++ L+KIL+D+DI A ++ K +SDLL N++D+S+LVITK L+K +DY+ K H E
Sbjct: 1544 VISTVLNKILIDKDIKSAEEFTKDIVSDLLQNKIDISMLVITKALSK--NDYKGKVIHNE 1601
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
+A +MR + +TAP +GDRVP+VI + K A +E++ DP++VLENNI +DT YY ++Q+
Sbjct: 1602 VALKMRALNPSTAPVLGDRVPFVITQGIKNAPLHEKAHDPLHVLENNIQLDTKYYCDHQL 1661
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISI-STPSNSGIMKFAKRQLSCIGC-KALISN- 935
PL+RIFEPIL N + + +GDHTRS+ I S P +++ C+ C L +N
Sbjct: 1662 RGPLMRIFEPILANP-ESIFTGDHTRSVHIQSAPPTKSFFSSLEKKRKCMACPNELAANE 1720
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
++C C+ +EA+LY ++ + LE F + WTQCQ C GSLHQ VLC++RDCPIFY R
Sbjct: 1721 SSVCKDCRNKEADLYQTSLQNLTNLENQFSQTWTQCQRCSGSLHQPVLCSNRDCPIFYLR 1780
Query: 996 KKAQKDMAEAKLQLDRWN 1013
K QKD+ EA+ +++++
Sbjct: 1781 TKVQKDLTEARRTVEKFS 1798
Score = 307 bits (786), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/332 (44%), Positives = 212/332 (63%), Gaps = 6/332 (1%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP-LSSGSAAIIRIFGVTREGHSVC 133
W+R P+ + + + +FQQL++DY +P +G ++R+FG+T+ G+SV
Sbjct: 781 WSRKPVPDMHPLK-DNFIFQQLEVDYCEVKEPLSGMPGPKTGPVPVVRLFGITKTGNSVL 839
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
CKVHGF PYF+I+CP G D F + L+ M N+ V + IE+V+K+SI+
Sbjct: 840 CKVHGFLPYFFIACPPGFTVRDCKEFRETLDEVMFRYTTNNNVENIILGIEIVKKKSILG 899
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRGIQ----LDGLGMKSFMTYESNVLFALRFMI 249
Y F+KI +A+P V CR IL+ G++ + ++ + T+ESN+ FALRF+I
Sbjct: 900 YNPNPLSDFIKITLAMPRYVTKCRDILENGMRYGYNVPTQEIRVYQTFESNIPFALRFLI 959
Query: 250 DCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
D + G +W+E+P G Y+ + +S CQ+E D D +S ++S +APFRILSFDI
Sbjct: 960 DKKVPGCSWVELPAGGYQISQNKVSTCQIEVDTSIDDFMSHPINEQWSDIAPFRILSFDI 1019
Query: 310 ECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
ECAGRKG FPEP DPVIQ+ANLV QGE +PFI+NV TLK C+ IVG V++ E+ +
Sbjct: 1020 ECAGRKGVFPEPGEDPVIQIANLVKNQGESEPFIKNVFTLKGCSNIVGAHVLTHPDEKSL 1079
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
L WR FI +VDPD++IGYNI FDLPYLIE+
Sbjct: 1080 LREWRKFIIKVDPDIIIGYNIANFDLPYLIER 1111
>gi|413925533|gb|AFW65465.1| hypothetical protein ZEAMMB73_774459 [Zea mays]
Length = 373
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/373 (90%), Positives = 354/373 (94%), Gaps = 2/373 (0%)
Query: 644 MIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTF 703
MIEHTKKLVEDKFTTVGGYEH AEVIYGDTDSVMVQFGV TVE AMKLGREAADYISGTF
Sbjct: 1 MIEHTKKLVEDKFTTVGGYEHTAEVIYGDTDSVMVQFGVSTVEDAMKLGREAADYISGTF 60
Query: 704 IKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTEC 763
KPIKLEFEKVY+PYLLISKKRYAGLYWTNPEKFDKMD KGIETVRRDNCLLVKNLVTEC
Sbjct: 61 TKPIKLEFEKVYFPYLLISKKRYAGLYWTNPEKFDKMDAKGIETVRRDNCLLVKNLVTEC 120
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERM 823
LHKILVDRD+PGAVQYVK+TISDLLMNR+DLSLLVITKGLTKTG+DY VKAAHVELAERM
Sbjct: 121 LHKILVDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAAHVELAERM 180
Query: 824 RKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLL 883
RKRD ATAP VGDRVPYVIIKAAKGAKAYE+SEDPIYVL+NNIPID YYLENQISKPLL
Sbjct: 181 RKRDPATAPTVGDRVPYVIIKAAKGAKAYEKSEDPIYVLDNNIPIDPQYYLENQISKPLL 240
Query: 884 RIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG--TLCSH 941
RIFEPILKNASKELL G HTRS+SISTPSNSGIMKFAK+QL+C+GCKA+IS TLCSH
Sbjct: 241 RIFEPILKNASKELLHGSHTRSVSISTPSNSGIMKFAKKQLTCLGCKAVISGASQTLCSH 300
Query: 942 CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKD 1001
CKGREAELYCKTV+ V +LE+LFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR+KAQKD
Sbjct: 301 CKGREAELYCKTVANVSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRRKAQKD 360
Query: 1002 MAEAKLQLDRWNF 1014
M EA+LQLDRW+F
Sbjct: 361 MTEARLQLDRWDF 373
>gi|70943300|ref|XP_741713.1| DNA polymerase delta catalytic subunit [Plasmodium chabaudi chabaudi]
gi|56520266|emb|CAH84358.1| DNA polymerase delta catalytic subunit, putative [Plasmodium chabaudi
chabaudi]
Length = 694
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/614 (55%), Positives = 455/614 (74%), Gaps = 9/614 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SI++DLQN N+E+R+R+A YC+KD LP RL+DKL+FI+NYVEMARVTG P
Sbjct: 79 QKEDVHYSIMNDLQNENSESRKRIATYCIKDGLLPLRLIDKLLFIYNYVEMARVTGTPFV 138
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV SQL RK K+ N +IP+ + +EGATVLE G+Y +PI+TLD
Sbjct: 139 YLLTRGQQIKVTSQLYRKCKELNYIIPSTYMKVNSNDKFEGATVLEPIKGYYIEPISTLD 198
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETF--VKSNLQKGILPEIL 577
FASLYPSIM+A+NLCYSTL+ D +L + P F VK N+++G+LP I+
Sbjct: 199 FASLYPSIMIAHNLCYSTLIKNNDEIS-DLNKNDITTVPGKNNFKFVKGNVKRGVLPLIV 257
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG-QLPCIEISSS 636
EEL+ ARK KA +K ++P+ K VL+GRQLALKISANSVYG+TGA G QLPC+EI++S
Sbjct: 258 EELIKARKNVKAMMKNEQNPITKMVLNGRQLALKISANSVYGYTGAAAGGQLPCLEIATS 317
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+T++GR MIE TK+ VE + G+EHNA V+YGDTDSVMV+FG V AM+LG++AA
Sbjct: 318 ITTFGRSMIEKTKETVEAYYCKKNGFEHNATVVYGDTDSVMVKFGTNDVGEAMRLGKDAA 377
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
D IS F+ PIKLEFEKVY PYLL++KKRYAGL +TNP K DKMD KGIETVRRD C+L+
Sbjct: 378 DRISKEFLNPIKLEFEKVYCPYLLLNKKRYAGLLYTNPNKHDKMDCKGIETVRRDFCILI 437
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+ ++ L+K+L+++D+ A++Y KS I DLL N +D+SLLV+TK L KT +YE + H
Sbjct: 438 QQMMETVLNKLLIEKDLNSAIEYTKSKIKDLLTNNIDMSLLVVTKSLGKT--EYETRLPH 495
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELA+++++RD+ATAPNVGDRV Y+IIK KG YER+EDP+YVL+NN+ ID ++YL+
Sbjct: 496 VELAKKLKQRDSATAPNVGDRVSYIIIKGTKGQAQYERAEDPLYVLDNNLSIDHNHYLD- 554
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG 936
I PL RIFE I++N S L G+HTR +I T S + + KF ++ + CIGC + I
Sbjct: 555 AIKNPLSRIFEVIMQN-SDSLFCGEHTRHKTILTSSQTALSKFLQKTIRCIGCNSSIKKP 613
Query: 937 TLCSHCK-GREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LC+HCK +E +Y + + ++ + F +LWT+CQ CQG+LH DV+C +RDCPIFYRR
Sbjct: 614 PLCNHCKTNKEFSIYMQKIKDLKVKQNEFFQLWTECQRCQGNLHIDVICMNRDCPIFYRR 673
Query: 996 KKAQKDMAEAKLQL 1009
K +KD+A + Q+
Sbjct: 674 AKIKKDVANLQEQV 687
>gi|403299517|ref|XP_003940530.1| PREDICTED: DNA polymerase delta catalytic subunit [Saimiri
boliviensis boliviensis]
Length = 1046
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/618 (57%), Positives = 445/618 (72%), Gaps = 67/618 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+AKQ+ L++P V+ G E Y GATV+E G+Y+ PIATLD
Sbjct: 545 YLLSRGQQVKVVSQLLRQAKQEGLLMPVVRSEGGED--YTGATVIEPLKGYYDVPIATLD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE
Sbjct: 603 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKEDQFIKTPTGDEFVKTSVRKGLLPQILEN 662
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 663 LLSARKRAKAELARETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 722
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 723 FGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 782
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 783 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 842
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT +++ LL++R
Sbjct: 843 LVT--------------------ASLRRLLIDR--------------------------- 855
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 856 --------------SLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 901
Query: 879 SKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN- 935
+KPLLRIFEPIL E LL GDHTR ++ T G++ FAKR+ CIGC+ ++S+
Sbjct: 902 AKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLSHQ 961
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +C C+ RE+ELY K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY R
Sbjct: 962 GAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR 1021
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KK +KD+ + + L R+
Sbjct: 1022 KKVRKDLEDQEQLLRRFG 1039
Score = 322 bits (824), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 158/336 (47%), Positives = 215/336 (63%), Gaps = 12/336 (3%)
Query: 74 KWARP---PLSSGYVSQCQSIMFQQLDIDYVIGDSN--RELLPLSSGSAAIIRIFGVTRE 128
+W RP PL Q + ++FQQL+ID+ +G + PLS GS ++R FGVT E
Sbjct: 78 RWLRPTPAPLDP----QTEPLIFQQLEIDHYVGPAQPVSGGPPLSRGSVPVLRAFGVTDE 133
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMV 186
G SVCC +HGF PYFY P G GP+ + + L + NR K V +E+
Sbjct: 134 GVSVCCHIHGFAPYFYTPAPPGFGPEHLGELQRELNLAISRDNRGGKELTGPAVLAVELC 193
Query: 187 QKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALR 246
+ S+ Y FL+I +ALP +VA R +L++GI++ GLG SF YE+NV F +R
Sbjct: 194 SRESMFGYHGHGPSLFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIR 253
Query: 247 FMIDCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRIL 305
FM+D +IVG NW+E+P GKY + + + CQLE D L+S+++S PEG + ++AP R+L
Sbjct: 254 FMVDTDIVGCNWLELPAGKYALRLKEKATQCQLEADVLWSNVVSHPPEGPWQRIAPLRVL 313
Query: 306 SFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFET 365
SFDIECAGRKG FPEP DPVIQ+ +L GE++PF+R +TL+ CAPI+G V S+E
Sbjct: 314 SFDIECAGRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTLRPCAPILGAKVQSYEK 373
Query: 366 ERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 374 EEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 409
>gi|50293371|ref|XP_449097.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528410|emb|CAG62067.1| unnamed protein product [Candida glabrata]
Length = 1096
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/617 (56%), Positives = 455/617 (73%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ ETRRRLAVYCLKDAYLP RLL+KLM + NY EMARVTG+P S
Sbjct: 489 QKEDVHHSIITDLQNGDRETRRRLAVYCLKDAYLPLRLLEKLMALVNYTEMARVTGIPFS 548
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + + VIPN+ GS++ YEGATV+E G+Y+ PIATLD
Sbjct: 549 YLLARGQQIKVVSQLFRKCLEIDTVIPNMHSHGSDE-QYEGATVIEPIRGYYDVPIATLD 607
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPE-CVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL +LNL E TP+G+ FV + ++GILP IL+
Sbjct: 608 FNSLYPSIMMAHNLCYTTLCNKATVDRLNLKKEEDYIITPNGDYFVTTKKRRGILPIILD 667
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DL++ DP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 668 ELISARKRAKKDLRDETDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 727
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GR MI TKK VE+K++ G +H+A VIYGDTDSVMV+FG ++ AM+LG EAA +
Sbjct: 728 SFGRVMIMETKKAVEEKYSIKNGAKHDAVVIYGDTDSVMVKFGTTDLKEAMELGAEAAAF 787
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+PYLLI+KKRYAGLYWTNP+K+DK+D KG+ +VRRD+C LV
Sbjct: 788 VSKLFKHPINLEFEKAYFPYLLINKKRYAGLYWTNPDKYDKLDQKGLASVRRDSCSLVSI 847
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL+DRD+ A+ +VK+TI D+L NR+D+S L+I+K L +Y H
Sbjct: 848 IMNKVLKKILIDRDVDSALGFVKATIDDILQNRVDISKLIISKTL---APNYTNPQPHAV 904
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRD + PN+GDRV YVI G K Y R+EDP+YVLE+NI ID+ YYL NQ+
Sbjct: 905 LAERMKKRD-GSGPNIGDRVDYVI--TGGGDKLYNRAEDPLYVLEHNIQIDSRYYLTNQL 961
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISIST-PSNSGIMKFAKRQLSCIGCKALISNGT 937
P++ I PI+ K+ S +SI I+T + G+M F K+ +C GC++ + G
Sbjct: 962 QNPIISIVAPII--GDKQATSMFTIKSIKINTGNTKGGLMGFIKKVEACKGCRSPLKKGE 1019
Query: 938 --LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LCS+CK R +ELY K + +V+ELE + RLWT+CQ C G+LH +VLC++++C FY R
Sbjct: 1020 GPLCSNCKSRSSELYIKALYEVRELEEKYARLWTECQRCAGTLHNEVLCSNKNCDTFYMR 1079
Query: 996 KKAQKDMAEAKLQLDRW 1012
K +K++ E QL +W
Sbjct: 1080 VKVKKELQEKVEQLSKW 1096
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/351 (38%), Positives = 194/351 (55%), Gaps = 15/351 (4%)
Query: 54 EESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLS 113
E L L + E + + + R ++ + + I FQQ++ + + ++
Sbjct: 75 ERELSLMEHEAALKDETDTSNYNRKLIAEDFNPETHDISFQQIEAEQATINGFKD----- 129
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
++A++R+FGVT EGHS+ C V GF+ Y Y+ P D + + + N
Sbjct: 130 ENTSAVVRLFGVTSEGHSILCNVTGFKHYLYVPAPNSANAQDPQELQKFI------SYVN 183
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMK 232
+ IE+V+++SI Y PF K+ P+ R ++G +
Sbjct: 184 QMYENAIDSIEVVKRQSIWGYSGDTMLPFWKVYTTHPSATNKLRTAFEKGHFNYNSWFAN 243
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISR 290
TY+ N+ + LR M+DC IVG +W+ +P GKY ++ +S CQLE Y ++IS
Sbjct: 244 GTTTYD-NIAYTLRLMVDCKIVGMSWVTLPKGKYNVVSDSQKVSTCQLEVTINYRNLISH 302
Query: 291 HPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLK 350
EGE+S AP RILSFDIECAGR G FPEP HD VIQ+AN+V GEK+PFIRNV TL
Sbjct: 303 PAEGEWSHTAPLRILSFDIECAGRPGIFPEPEHDRVIQIANVVNTVGEKKPFIRNVFTLD 362
Query: 351 SCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+CAPI G V ETE D+L WRDFI +VDPDV+IGYN FD+PYL+ +
Sbjct: 363 TCAPITGSQVFDNETEEDLLRKWRDFIIQVDPDVIIGYNTTNFDIPYLLNR 413
>gi|83282608|ref|XP_729844.1| DNA polymerase delta catalytic subunit [Plasmodium yoelii yoelii
17XNL]
gi|23488820|gb|EAA21409.1| DNA polymerase delta catalytic subunit [Plasmodium yoelii yoelii]
Length = 1097
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/614 (55%), Positives = 454/614 (73%), Gaps = 9/614 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SI++DLQN N+E+R+R+A YC+KD LP RL+DKL+FI+NYVEMARVTG P
Sbjct: 482 QKEDVHYSIMNDLQNENSESRKRIATYCIKDGLLPLRLIDKLLFIYNYVEMARVTGTPFV 541
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV SQL RK K+ N +IP+ + +EGATVLE G+Y +PI+TLD
Sbjct: 542 YLLTRGQQIKVTSQLYRKCKELNYIIPSTYIKVNNNDKFEGATVLEPIKGYYIEPISTLD 601
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETF--VKSNLQKGILPEIL 577
FASLYPSIM+A+NLCYSTL+ D +L + P F VK N+++G+LP I+
Sbjct: 602 FASLYPSIMIAHNLCYSTLIKNNDEIS-DLNKNDITTVPGKNNFKFVKGNVKRGVLPLIV 660
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG-QLPCIEISSS 636
EEL+ ARK KA +K ++P+ K VL+GRQLALKISANSVYG+TGA G QLPC+EI++S
Sbjct: 661 EELIRARKNVKAMMKNEQNPITKMVLNGRQLALKISANSVYGYTGAAAGGQLPCLEIATS 720
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+T++GR MIE TK+ VE + G+EHNA V+YGDTDSVMV+FG V AM+LG++AA
Sbjct: 721 ITTFGRSMIEKTKETVEAYYCKNNGFEHNATVVYGDTDSVMVKFGTNDVGEAMRLGKDAA 780
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
+ IS F+ PIKLEFEKVY PYLL++KKRYAGL +TNP K DKMD KGIETVRRD C+L+
Sbjct: 781 ERISKEFLHPIKLEFEKVYCPYLLLNKKRYAGLLYTNPNKHDKMDCKGIETVRRDFCILI 840
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+ ++ L+K+L+++D+ A++Y KS I DLL N +D+SLLV+TK L K +YE + H
Sbjct: 841 QQMMETVLNKLLIEKDLNSAIEYTKSKIKDLLTNNIDMSLLVVTKSLGKA--EYETRLPH 898
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELA+++++RD+ATAPNVGDRV Y+IIK KG YER+EDP+YVL+NN+ ID ++YL+
Sbjct: 899 VELAKKLKQRDSATAPNVGDRVSYIIIKGTKGQAQYERAEDPLYVLDNNLSIDHNHYLD- 957
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG 936
I PL RIFE I++N S L G+HTR +I T S + + KF K+ + CIGC + I
Sbjct: 958 AIKNPLSRIFEVIMQN-SDSLFCGEHTRHKTILTSSQTALSKFLKKTIRCIGCNSSIKKP 1016
Query: 937 TLCSHCK-GREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LC+HCK +E +Y + + ++ + F +LWT+CQ CQG+LH DV+C +RDCPIFYRR
Sbjct: 1017 PLCNHCKTNKEFSIYMQKIKDLKLKQNEFFQLWTECQRCQGNLHIDVICMNRDCPIFYRR 1076
Query: 996 KKAQKDMAEAKLQL 1009
K +KD+A + Q+
Sbjct: 1077 AKIKKDVANLQEQV 1090
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 160/292 (54%), Gaps = 9/292 (3%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
S IIRI+ +T G+SV VH F PYFY+ P G DD+ +L + N+
Sbjct: 118 SVPIIRIYSITNCGYSVVVNVHNFFPYFYVEKPNGFNNDDMIKLESMLNETLSLNNQFKM 177
Query: 176 VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF- 234
+ IE V+ SIMY+++ FLKI V LP MV S + + GI ++ K F
Sbjct: 178 YENKILKIETVKTESIMYFKKSGKTDFLKITVLLPKMVPSLKKFFESGINVNS---KHFG 234
Query: 235 -MTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRH 291
+ YE+N+ F LR++ID I G +WI+ Y R K S C E D Y +I
Sbjct: 235 GIVYEANLPFILRYIIDKKITGSSWIKCEKNSYIIRSKNKQSSNCTFEIDIHYENIEPMA 294
Query: 292 PEGEFSKMAPFRILSFDIECAGRKGH-FPEPTHDPVIQVANLVTLQGEK-QPFIRNVMTL 349
E E+ K+ RILSFDIEC G FPE DP+IQ+++++ LQG+ + + + TL
Sbjct: 295 LENEYQKIPKLRILSFDIECIKLDGKGFPEAKTDPIIQISSILYLQGDPIENCAKFIFTL 354
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
CA I G +V+ F E+ +L AW +F+ +DPD + GYNI FD+PY++ +
Sbjct: 355 LECASIPGSNVIWFNDEKTMLEAWNEFVIRIDPDFLTGYNIINFDIPYILNR 406
>gi|209882407|ref|XP_002142640.1| DNA polymerase family B [Cryptosporidium muris RN66]
gi|209558246|gb|EEA08291.1| DNA polymerase family B, putative [Cryptosporidium muris RN66]
Length = 1123
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/619 (55%), Positives = 453/619 (73%), Gaps = 13/619 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+S+I LQ G ETR+R+AVYCLKD+ LP RL+ L N +EMARVTG +
Sbjct: 508 QKEDVHYSMIHSLQEGTPETRKRIAVYCLKDSLLPLRLMKHLKLFPNIIEMARVTGTTLD 567
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAG-SEQGTYEGATVLEARAGFYEKPIATL 518
LLSRGQ IKV SQ+LRK K N ++P +K++G S + YEGATVLE GFY+ PI+TL
Sbjct: 568 ILLSRGQQIKVTSQILRKCKSLNFIMPTLKRSGESVEDQYEGATVLEPVKGFYKDPISTL 627
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
DFASLYPSIM+A+N+CYSTLV DA +L + K+P+G TFV S+++KGILP I+E
Sbjct: 628 DFASLYPSIMIAHNICYSTLVPSNDAD--HLSDDFKRKSPAGHTFVLSSVRKGILPLIVE 685
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG-QLPCIEISSSV 637
EL+ ARK+A+ ++ KDP+ ++LDGRQLALKISANSVYG+TGAT G Q PC+EIS+S+
Sbjct: 686 ELILARKKARKEMSVTKDPVLLSILDGRQLALKISANSVYGYTGATTGGQFPCLEISTSI 745
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TSYGR MI+ TK VE ++ GY+HNA VIYGDTDSVMVQFG + AM LG +AA
Sbjct: 746 TSYGRSMIDFTKMEVEKRYNIANGYKHNATVIYGDTDSVMVQFGTSDISEAMDLGLKAAT 805
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
IS F+ PI+LEFEKVY P+LL++KKRYAG+ + N E ++K+D KGIETVRRDNCLLV+
Sbjct: 806 EISDMFLSPIRLEFEKVYCPFLLMNKKRYAGVLYKNSETYEKIDCKGIETVRRDNCLLVQ 865
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
+ L KILV++D+ GA +Y ++ I+DLL N++DLSLLV++K L K DDY K AHV
Sbjct: 866 QVADIVLKKILVNKDVEGAKEYTRNIIADLLRNKVDLSLLVVSKSLGK--DDYTAKLAHV 923
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA+++R+RD +APNVGDRV Y+II+ +KG Y+R+EDP+YVLE N+ IDT +Y++
Sbjct: 924 ELAKKLRQRDPGSAPNVGDRVSYIIIRGSKGQPQYDRAEDPLYVLEKNLAIDTQHYVDT- 982
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT 937
I L+RIFE ++K+ K L G HTRS+++ + +NS + F K+ L C+ CK + G
Sbjct: 983 IKASLIRIFEGVMKDPEK-LFVGSHTRSVTLLSSTNSALSSFVKKGLQCLNCKTSVKEGA 1041
Query: 938 LCSHCKGRE----AELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
LC C E A L CK + + +E EV + LWTQCQ CQ SL QD++CTSRDCPIFY
Sbjct: 1042 LCKSCIKIENQVSASLICK-LREFREKEVEYNALWTQCQRCQSSLFQDIICTSRDCPIFY 1100
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
+R K +KD+A QLDR+
Sbjct: 1101 KRTKVKKDIATIGEQLDRF 1119
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 164/316 (51%), Gaps = 39/316 (12%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
II++F VT+ G+S+ VHGF PY Y P I++ ++ S+
Sbjct: 129 IIQLFCVTKSGYSILVNVHGFFPYIYCEVSNKSSPKP----SAIVKSIEQQLGNYSEYQS 184
Query: 179 FVRHIEMVQKRSIMYYQQQKSQP----------FLKIVVALPTMVASCRGILDRGIQLDG 228
V +E+ + SIMY+++ K F KI + LP M+ +CR +++ G +D
Sbjct: 185 RVLDVEISEFESIMYFKKSKEYSNDGISYSPSLFYKITMLLPKMIPTCRSLIENG-NIDC 243
Query: 229 LGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGK------------------YRKTA 270
+ + YE+N+ F LRF+ID NI G+WI + K Y +
Sbjct: 244 IPI----AYEANIPFILRFLIDKNISTGSWISLDKSKVFLRNSNMSEVNNLTKEVYNMSD 299
Query: 271 K-TLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH-FPEPTHDPVIQ 328
+ ++S Q+EFD I GE+ P RILSFDIEC G FPEP DPVIQ
Sbjct: 300 QLSISTVQIEFDVFPDCINVYSSSGEWLTPPPVRILSFDIECVKNIGTGFPEPEKDPVIQ 359
Query: 329 VANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGY 388
++++VT ++P + TLK CA + G V+ F+ E+D+LLAWR+FI +DPD++ GY
Sbjct: 360 ISSVVTYLDSEEPICNIIFTLKECAAVAGAFVLWFDNEQDLLLAWREFIISIDPDILTGY 419
Query: 389 NICKFDLPYLIEKEDV 404
N FD+ YL E+ +
Sbjct: 420 NCINFDMFYLFERAKI 435
>gi|240278554|gb|EER42060.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus H143]
Length = 1053
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/618 (57%), Positives = 452/618 (73%), Gaps = 62/618 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 488 QKEDVHHTMITELFNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 547
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
FLLSRGQ +K +SQL RKA ++ LVIPN++ ++ SEQ YEGATV+E FY+ PIATL
Sbjct: 548 FLLSRGQQVKFISQLFRKALEQQLVIPNLRNESTSEQ--YEGATVIEPIRDFYDVPIATL 605
Query: 519 DFASLYPSIMMAYNLCYSTLVTPE--DARKLNLPPECVNKTPSGETFVKSNLQKGILPEI 576
DFASLYPSI+ A+NLCY+TL+ DA ++ + + TP+G+ F S ++KG+L +I
Sbjct: 606 DFASLYPSIIQAHNLCYTTLLKKSTIDAHQMKEGEDYI-VTPNGDRFCTSKVRKGLLTQI 664
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
LEELL ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGATVG+LPC+ I+SS
Sbjct: 665 LEELLGARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASS 724
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
TSYGRQMIE TK+ VE K+T GY H+A+V+YGDTDSVMV+FG+ + AMKLG+EAA
Sbjct: 725 TTSYGRQMIEKTKEEVEAKYTIANGYSHDAKVVYGDTDSVMVKFGMKDLAEAMKLGQEAA 784
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
DY+S FI PIKLEFEKVY+PYLLI+KKRYAGLYWT P+ +DKMDTKGIETVRRDNC +V
Sbjct: 785 DYVSSKFINPIKLEFEKVYFPYLLINKKRYAGLYWTRPDNYDKMDTKGIETVRRDNCRMV 844
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+ ++ L KIL+DRD+ GA + + AH
Sbjct: 845 QTVIETVLRKILIDRDVDGA----------------------------------QSRPAH 870
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELAER R AA A + GDRV YV++K + +K YE+SEDPIYVLENNIPIDT YYL+N
Sbjct: 871 VELAERWRSATAALA-HSGDRVAYVMVKWRR-SKNYEKSEDPIYVLENNIPIDTKYYLDN 928
Query: 877 QISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN 935
Q++KPL RIFEPIL + + +LL+G+HTRSIS++ P+ G+MKF K+ +C+GCK ++
Sbjct: 929 QLAKPLTRIFEPILGEKKAGQLLTGEHTRSISVAAPTLGGLMKFTKKTQTCMGCKKPLT- 987
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G+E + V FGRLWTQCQ CQGSLH +V+C+SRDCPIFY R
Sbjct: 988 --------GKEDS----------DGAVRFGRLWTQCQRCQGSLHCEVICSSRDCPIFYMR 1029
Query: 996 KKAQKDMAEAKLQLDRWN 1013
KA+KD+ +A+ +L R++
Sbjct: 1030 MKAKKDVEDAEKELARFD 1047
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 200/348 (57%), Gaps = 29/348 (8%)
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
+++ + + +WARP L + S+ ++ FQQ++ E + G +++FG
Sbjct: 87 KENNSEKDQQWARPSLDNFDASR-DNLCFQQIEA---------EEGTIGGGKQPAVKLFG 136
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT GHSV V F Y Y++ P P D F LE + E + + + ++
Sbjct: 137 VTEAGHSVLLHVTHFLHYLYVAAPVSFAPTDCEGFKAYLEHEI-EIHHPA-----IHSVQ 190
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-------IQLDGLGMKSFMTY 237
MV + ++ +Q + P+LKI V P + R +++ G + D G+ +F
Sbjct: 191 MVMRENLFGFQGNQKSPYLKITVTDPRHINKLRTLIETGKANYRGMWRADADGILTF--- 247
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGE 295
N+ + LRFMID I G +W+E P KY+ + +S CQ+E Y D+I+ +GE
Sbjct: 248 -DNIEYILRFMIDTGISGMSWVEAPASKYQILPMVERMSNCQIEATIHYRDLIAHPNDGE 306
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
++KMAP RILSFDIECAGRKG FPE DPVIQ+AN+VT GE +PFIRNV L +C+ I
Sbjct: 307 WAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANVVTRYGESKPFIRNVFVLGTCSLI 366
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
V ++ F+TE +L+AW++F+ EVDPDV+IGYNI FD PYL+++ +
Sbjct: 367 VNTQLLEFDTEEKMLMAWKNFLVEVDPDVIIGYNIANFDFPYLLKRAE 414
>gi|118400060|ref|XP_001032353.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
gi|89286694|gb|EAR84690.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 1124
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/650 (54%), Positives = 459/650 (70%), Gaps = 41/650 (6%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH+ IS LQ G+AETR+RLAVYCLKDA LP +L+ KLM I+NY EMARVTGVPI+
Sbjct: 478 QKEDVHHTQISGLQKGDAETRKRLAVYCLKDAQLPLKLMQKLMCIYNYTEMARVTGVPIN 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FL +RGQ IKV SQL R+ K NL IP + G + +EGA VL+ + GFY+KPIATLD
Sbjct: 538 FLFTRGQQIKVASQLYRRTKLLNLYIPTERSQG-QGDKFEGAFVLQPKKGFYDKPIATLD 596
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIMMA+NLCYSTL++ A +N + TP G+ F K ++++GILP+IL++
Sbjct: 597 FASLYPSIMMAHNLCYSTLISKNVAMSMNKDDYTL--TPHGDYFAKPHVRQGILPDILKD 654
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK+AK +L + DPL KAVLDGRQLALKISANSVYGFTGA VGQLPC+EISSSVTS
Sbjct: 655 LLAARKKAKNELAKETDPLRKAVLDGRQLALKISANSVYGFTGAQVGQLPCLEISSSVTS 714
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE T+ V + + GY ++++VIYGDTDSVMV+FG ++E AMK G+EAA+ I
Sbjct: 715 FGRQMIEATRDFVLNHYNKANGYNYDSDVIYGDTDSVMVKFGCDSIEEAMKYGKEAAEMI 774
Query: 700 SGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
S FI PIKLEFEKVYYPYLLISKKRYAG ++T P+K+DK+DTKG+E VRRDNC ++
Sbjct: 775 SKKLFINPIKLEFEKVYYPYLLISKKRYAGCFYTKPDKYDKIDTKGMENVRRDNCQFIRE 834
Query: 759 LVTECLHKILVDRDIPG---AVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD------ 809
++ CL ILV+ G ++Q++K ISDL N++D+S LVITK LTK D
Sbjct: 835 MMNTCLRYILVEHKQDGVQRSIQFIKGCISDLYQNKVDISKLVITKSLTKKSADDDEGEE 894
Query: 810 -------------------YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAK 850
Y+ K AHVELA++M KRD +AP +GDR+PYVI+ AK AK
Sbjct: 895 DGKKGSSHNNKAKEPSANQYKGKQAHVELAKKMAKRDPGSAPCIGDRIPYVIVAGAKSAK 954
Query: 851 AYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRS-ISIS 909
YE+ EDPIYVLEN+IP+D YY+E QI P+ RI+ I+ N L G+HT++
Sbjct: 955 NYEKVEDPIYVLENDIPLDYDYYIEKQIKNPITRIYSHIIDNVD-SLFYGEHTKNRYQPK 1013
Query: 910 TPSNSGIMKFAKRQLSCIGCKALISNGT--LCSHC----KGREAELYCKTVSQVQELEVL 963
S G+ KF ++ SC+ CK + NG +C +C R ++Y + + Q Q +E
Sbjct: 1014 VNSGHGLGKFIVKKESCLQCKCQV-NGKQPVCDNCLEKNPQRLIDIYTEKIIQHQSIEYQ 1072
Query: 964 FGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWN 1013
+ +LWTQCQ CQGSLH+ V+C++RDCPI+Y+R K Q D++ ++ L R++
Sbjct: 1073 YNQLWTQCQRCQGSLHEQVICSNRDCPIYYKRTKLQTDLSRSQQLLSRFD 1122
Score = 233 bits (593), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 218/395 (55%), Gaps = 40/395 (10%)
Query: 36 DEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQ 95
DE +++D D+ E EE + L + QD +++ K+ RPP+ + +++ F Q
Sbjct: 17 DELIEDD--FDDVEFNE-EEDIALLQANEDQDLSNK--KYCRPPIDTTKINEQNDFYFMQ 71
Query: 96 LDIDYVI----------GDSNRELLPLS-------SGSAAIIRIFGVTREGHSVCCKVHG 138
LD DY + GD ++ S S IIR++GVT++ HSV + G
Sbjct: 72 LDADYYLVSNNKKDGDQGDDKQKQAQESNKKEDENSEREPIIRMYGVTKDQHSVLVSIRG 131
Query: 139 FEPYFYISCPQGMGPDDISHFHQILEGRMREAN------RNSKVPQFVRHIEMVQKRSIM 192
PY ++ P + P+ Q L+ M + N RN K F+R IE+V+ SI
Sbjct: 132 VVPYLFVRLPPQIQPN-----AQTLKSIMDDLNKQGKFQRNVKTTNFIRKIEVVKGESIK 186
Query: 193 YYQQQK--SQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMID 250
YY+ + +LKI +P + + RG++++G +DG+ + +T+ESN+ FALR+MID
Sbjct: 187 YYKGKDYAQDTYLKIYTFIPPFIPALRGMIEKGYTIDGIRFPA-VTFESNIPFALRYMID 245
Query: 251 CNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEG-EFSKMAPFRILSF 307
+IVG WI++ K+ R K S CQ+E D ++ + +++ +AP RI SF
Sbjct: 246 ADIVGMGWIKLDKEKFKIRSLDKHKSRCQIEIDVDCQNVHGMDAQDPQWADIAPLRIFSF 305
Query: 308 DIECAGRKGHFPEPTHD-PVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETE 366
DIEC + G FP + D P+IQ+A ++ + +++ +R V T+ +C+ I G V SF+TE
Sbjct: 306 DIECLAKSGGFPNASKDDPIIQIATVLKIHDQQEDIVRTVFTMDTCSNIPGCIVKSFKTE 365
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++LL W F++ VDPD+ +GYNI FD PY++E+
Sbjct: 366 TELLLEWEKFLQNVDPDIFLGYNITNFDFPYILER 400
>gi|124802365|ref|XP_001347450.1| DNA polymerase delta catalytic subunit [Plasmodium falciparum 3D7]
gi|232011|sp|P30315.1|DPOD1_PLAFK RecName: Full=DNA polymerase delta catalytic subunit
gi|23495030|gb|AAN35363.1|AE014831_39 DNA polymerase delta catalytic subunit [Plasmodium falciparum 3D7]
gi|9941|emb|CAA44289.1| DNA Polymerase delta [Plasmodium falciparum]
gi|160270|gb|AAA29589.1| DNA polymerase-delta [Plasmodium falciparum]
Length = 1094
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/613 (55%), Positives = 452/613 (73%), Gaps = 7/613 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SI++DLQN + E+R+R+A YC+KD LP RL+DKL+FI+NYVEMARVTG P
Sbjct: 479 QKEDVHYSIMNDLQNESPESRKRIATYCIKDGVLPLRLIDKLLFIYNYVEMARVTGTPFV 538
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV SQL RK K+ N VIP+ + YEGATVLE G+Y +PI+TLD
Sbjct: 539 YLLTRGQQIKVTSQLYRKCKELNYVIPSTYMKVNTNEKYEGATVLEPIKGYYIEPISTLD 598
Query: 520 FASLYPSIMMAYNLCYSTLV-TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM+A+NLCYSTL+ + + L + + FVK N++KGILP I+E
Sbjct: 599 FASLYPSIMIAHNLCYSTLIKSNHEVSDLQNDDITTIQGKNNLKFVKKNVKKGILPLIVE 658
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG-QLPCIEISSSV 637
EL+ ARK+ K +K K+ + K VL+GRQLALKISANSVYG+TGA+ G QLPC+E++ S+
Sbjct: 659 ELIEARKKVKLLIKNEKNNITKMVLNGRQLALKISANSVYGYTGASSGGQLPCLEVAVSI 718
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
T+ GR MIE TK+ VE + GYEHN+ VIYGDTDSVMV+FG +E AM LG++AA+
Sbjct: 719 TTLGRSMIEKTKERVESFYCKSNGYEHNSTVIYGDTDSVMVKFGTNNIEEAMTLGKDAAE 778
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
IS F+ PIKLEFEKVY PYLL++KKRYAGL +TNP K DKMD KGIETVRRD C+L++
Sbjct: 779 RISKEFLSPIKLEFEKVYCPYLLLNKKRYAGLLYTNPNKHDKMDCKGIETVRRDFCILIQ 838
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ L+K+L+++++ A++Y KS I +LL N +D+SLLV+TK L KT DYE + HV
Sbjct: 839 QMMETVLNKLLIEKNLNSAIEYTKSKIKELLTNNIDMSLLVVTKSLGKT--DYETRLPHV 896
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA+++++RD+ATAPNVGDRV Y+I+K KG YER+EDP+YVL+NN+ ID ++YL+
Sbjct: 897 ELAKKLKQRDSATAPNVGDRVSYIIVKGVKGQAQYERAEDPLYVLDNNLAIDYNHYLD-A 955
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT 937
I PL RIFE I++N S L SGDHTR +I T S + + KF K+ + CIGC + I
Sbjct: 956 IKSPLSRIFEVIMQN-SDSLFSGDHTRHKTILTSSQTALSKFLKKSVRCIGCNSSIKKPP 1014
Query: 938 LCSHCK-GREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC+HCK +E +Y + + + + F +LWT+CQ CQG+LH DV+C +RDCPIFYRR
Sbjct: 1015 LCNHCKENKEFSIYMQKIKDFKNKQNEFFQLWTECQRCQGNLHVDVICMNRDCPIFYRRA 1074
Query: 997 KAQKDMAEAKLQL 1009
K +KD+A + Q+
Sbjct: 1075 KIKKDIANLQEQV 1087
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 184/368 (50%), Gaps = 33/368 (8%)
Query: 66 QDFASRLAKWARP----PLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGS----- 116
++F L + RP + + + ++ Q+D+DY + + + ++ SGS
Sbjct: 37 EEFDKLLKNYERPNVYDEIGNATFKNDEDLITFQIDLDYTVENIFKNMIYNESGSNNSIL 96
Query: 117 -------------------AAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS 157
IIRI+ + ++G SV VH F PYFY+ P +D+
Sbjct: 97 NDIYMPYRILLSKDKNYVSVPIIRIYSLRKDGCSVLINVHNFFPYFYVEKPDDFDNEDLI 156
Query: 158 HFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCR 217
++ + ++ + + IE+V+ S+MY+++ + FLKI V LP MV S +
Sbjct: 157 KLEMLMNENLNLNSQYKIYEKKILKIEIVKTESLMYFKKNGKKDFLKITVLLPKMVPSLK 216
Query: 218 GILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSY 275
+ + ++ + + YE+N+ F LR++ID I G +WI G Y R K +S
Sbjct: 217 KYFEGIVHVNNKSIGG-IVYEANLPFILRYIIDHKITGSSWINCKKGHYYIRNKNKKISN 275
Query: 276 CQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH-FPEPTHDPVIQVANLVT 334
C E D Y + E E+ ++ RILSFDIEC G FPE +DP+IQ+++++
Sbjct: 276 CTFEIDISYEHVEPITLENEYQQIPKLRILSFDIECIKLDGKGFPEAKNDPIIQISSILY 335
Query: 335 LQGEK-QPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
QGE + + TL CA I G +V+ F E+ +L AW +FI +DPD + GYNI F
Sbjct: 336 FQGEPIDNCTKFIFTLLECASIPGSNVIWFNDEKTLLEAWNEFIIRIDPDFLTGYNIINF 395
Query: 394 DLPYLIEK 401
DLPY++ +
Sbjct: 396 DLPYILNR 403
>gi|403353908|gb|EJY76499.1| DNA polymerase [Oxytricha trifallax]
Length = 1068
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/644 (54%), Positives = 456/644 (70%), Gaps = 37/644 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS I LQ + TRRRLA+YCLKDAYLP RL++KL+ ++N+ EM+RVTGVPIS
Sbjct: 431 QKEDVHHSQIFILQEKDQFTRRRLAIYCLKDAYLPLRLMEKLLSLYNFTEMSRVTGVPIS 490
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L +RGQ IKV SQL RKA NL+IP ++ S +G +EGA V++ F+ +PIA LD
Sbjct: 491 YLFTRGQQIKVTSQLYRKANACNLLIP-TERGPSNEGKFEGALVIDPNRDFFLEPIAILD 549
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIM+A+N+CYSTL+ P+ + N P+ KTP+G+ F+K+ ++KGILP ILEE
Sbjct: 550 FASLYPSIMLAHNICYSTLIPPKAVKFYN--PDHYLKTPTGDHFIKAEVKKGILPLILEE 607
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
L+ ARK+AK KE EKAVLDGRQ+A+K++ANSVYGFTGA +GQLPCI ISSSVT+
Sbjct: 608 LIEARKKAK---KEFALSDEKAVLDGRQMAMKVAANSVYGFTGAQIGQLPCIAISSSVTA 664
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR+MIE +K V +F GY++++EVIYGDTDSVMV+FGV +V AM+LG+EAA+Y+
Sbjct: 665 YGREMIEMSKNFVITRFNKQNGYKYDSEVIYGDTDSVMVKFGVKSVAEAMELGQEAAEYV 724
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ F +PIKLEFEKVYYPYLL++KKRYAGL WT P+KFD +D KGIETVRRD+C LV++
Sbjct: 725 TKFFTEPIKLEFEKVYYPYLLLNKKRYAGLLWTKPDKFDCIDAKGIETVRRDSCGLVQDT 784
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD---------- 809
V L+ IL++RD A+ Y K ISDLL NR+DLSLLVI+KGL K
Sbjct: 785 VQNSLNMILIERDSNKALDYCKGIISDLLQNRIDLSLLVISKGLGKKSKSEIQDCISGPP 844
Query: 810 ------------YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSED 857
Y K AH ELAERMRKRDAA+APN GDRV YV++K +K +E+SED
Sbjct: 845 TTIKEIKAQAKGYTQKQAHTELAERMRKRDAASAPNQGDRVAYVMVKKTADSKVHEKSED 904
Query: 858 PIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISI-STPSNSGI 916
P++ L +N+PID YY +NQ+ +PLLR+FEPI NA L G+HTR+I + +G+
Sbjct: 905 PMFALTHNMPIDYQYYQDNQLKQPLLRLFEPIFPNAEDLLFKGEHTRNIYVPKLQPKTGL 964
Query: 917 MKFAKRQLSCIGCKALIS-----NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQC 971
K+A Q C+GCK +++ LC C+ + ++Y + ++ E F LW QC
Sbjct: 965 GKYAIVQKQCLGCKTILTKQQAEQSVLCRGCEPKRRQIYIERKIELNINEKAFADLWVQC 1024
Query: 972 QECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAE-AKL--QLDRW 1012
Q CQG+LH+DVLC SRDCPIFYRR KA+K E A+L D W
Sbjct: 1025 QRCQGNLHEDVLCQSRDCPIFYRRIKAKKQYEENAQLLKGFDDW 1068
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 145/316 (45%), Positives = 190/316 (60%), Gaps = 10/316 (3%)
Query: 91 IMFQQLDIDYVIGDSNRELLPLSSGSA--AIIRIFGVTREGHSVCCKVHGFEPYFYISCP 148
I F Q D+D I N E L IR++GVT +G+SV C VH F+PYFY+
Sbjct: 45 IEFMQFDVDSYIA-PNPEFLQSHENDKDRPHIRMYGVTAQGNSVLCHVHNFDPYFYVEVD 103
Query: 149 QGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVA 208
P+ Q ++ + N+ + V+ +E+VQK SIM Y + KS F+KI +
Sbjct: 104 SKKHPNFTPEDLQKIKSDLNNWNKQEEC---VKLVELVQKNSIMGYLE-KSGLFIKIYCS 159
Query: 209 LPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
LP V R + + G L G S +TYESN+ ++LRFMID IVG WI + GKYR
Sbjct: 160 LPKYVQQLRSLFENGSFTLRGSQCFSHITYESNLSYSLRFMIDHQIVGMQWIRIEAGKYR 219
Query: 268 K-TAKTLSYCQLEFDCLY-SDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP 325
K T +S CQLE D +DII EG++S + P RILSFDIEC KG FP+P DP
Sbjct: 220 KRTGTKMSSCQLEIDVEDPNDIIGLPFEGDYSAIGPIRILSFDIECGADKGRFPQPQTDP 279
Query: 326 VIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVM 385
VIQ+AN+V + GE QPF+RNV TLK CAPI+G V F +E +L +WRDFI EVDPD++
Sbjct: 280 VIQIANIVKIHGEDQPFVRNVFTLKECAPILGTQVNWFNSETALLASWRDFILEVDPDII 339
Query: 386 IGYNICKFDLPYLIEK 401
G+NI FD PY+I +
Sbjct: 340 TGFNIVNFDFPYIINR 355
>gi|402588589|gb|EJW82522.1| DNA polymerase [Wuchereria bancrofti]
Length = 638
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/594 (57%), Positives = 447/594 (75%), Gaps = 9/594 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV +S+I+DLQNGNA TRRRLA+YC+KDAYLP +LL KLM I NY+EMARVTGVP+
Sbjct: 47 QKEDVDYSMIADLQNGNAFTRRRLAIYCMKDAYLPLKLLQKLMSIINYIEMARVTGVPLD 106
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQ+LRKAK + +P + ++ TYEGATV++ GFY PIATLD
Sbjct: 107 YLLSRGQQVKVMSQILRKAKSLHFFLPVIDIVQADD-TYEGATVIDPIRGFYNTPIATLD 165
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIM+A+NLCY+TL+ +A NL TPS FVKSN+++G+LP++LE+
Sbjct: 166 FASLYPSIMIAHNLCYTTLIRGSNATH-NLSDSDFEVTPSNNRFVKSNIRRGLLPQVLED 224
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AK DLK KDP + VL+GRQLALKISANSVYGFTGA+VG+LPC+EIS SVT+
Sbjct: 225 LLNARKQAKNDLKNEKDPFRRMVLNGRQLALKISANSVYGFTGASVGKLPCLEISQSVTA 284
Query: 640 YGRQMIEHTKKLVEDKFTTV---GGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
YGRQMI+ TK VE+ + G NA+VIYGDTDSVMV+FGV V+AAM+LG AA
Sbjct: 285 YGRQMIDLTKSAVEEIYKEGYLDGKCPCNAQVIYGDTDSVMVKFGVKDVKAAMELGLHAA 344
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
+S FI PIKLEFEKVY P+LLI+KKRYAGLY+T PEK DK+D KG+ETVRRDNC LV
Sbjct: 345 TEVSKKFIPPIKLEFEKVYSPFLLINKKRYAGLYFTRPEKHDKIDCKGLETVRRDNCPLV 404
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+++ CL K+L++ D A+++ K ISDLL NR+D+S L+ITK LT++ + Y K AH
Sbjct: 405 SKVLSTCLEKMLLEGDATSALEHAKKVISDLLCNRIDISELIITKELTRSSNAYAAKQAH 464
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
V LAERMR+RD+ +AP +GDRVPYVI+ + AYE++EDPIYVL+NNIPIDT YYLEN
Sbjct: 465 VVLAERMRERDSGSAPRLGDRVPYVIVAKGQKVPAYEKAEDPIYVLQNNIPIDTAYYLEN 524
Query: 877 QISKPLLRIFEPILKNASKELL-SGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN 935
Q++KPL RIFEPIL + ++ +L +G HT ++ SG+ +F ++ C+ CK+ +
Sbjct: 525 QLAKPLARIFEPILGDKAESILTTGVHTLVRTVVQSKKSGLSQFFQKTERCLSCKSSLPK 584
Query: 936 G---TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTS 986
G C+HCK E +++ ++ + +E F RLWT+CQ C G+++++VLC++
Sbjct: 585 GVSDATCAHCKPNEGKVFITHLALMNAIENRFARLWTECQNCSGTMNEEVLCSA 638
>gi|66475912|ref|XP_627772.1| DNA polymerase delta catalytic subunit. DNAQ-like 3'-5' exonuclease;
RNAseH fold [Cryptosporidium parvum Iowa II]
gi|32399018|emb|CAD98258.1| DNA polymerase family B subunit, probable [Cryptosporidium parvum]
gi|46229188|gb|EAK90037.1| DNA polymerase delta catalytic subunit. DNAQ-like 3'-5' exonuclease;
RNAseH fold [Cryptosporidium parvum Iowa II]
Length = 1084
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/619 (54%), Positives = 449/619 (72%), Gaps = 10/619 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+S+I LQ+GN ETR+R+A+YCLKD+ LP RL+ L N +EMARVTG I
Sbjct: 470 QKEDVHYSMIRGLQDGNPETRKRIAIYCLKDSILPLRLMKHLKLFPNIIEMARVTGTTID 529
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
LLSRGQ IKV SQ+LRK K N ++P VK YEGATVLE GFY+ PI+TLD
Sbjct: 530 ILLSRGQQIKVTSQILRKCKSTNFLMPTVKNQSDGDNQYEGATVLEPLKGFYKDPISTLD 589
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIM+A+N+CYSTL+ P + + N+P + +P+G +FV S+++KGILP I+EE
Sbjct: 590 FASLYPSIMIAHNICYSTLIPPLNLK--NVPEDLRKTSPTGHSFVLSSVRKGILPLIVEE 647
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG-QLPCIEISSSVT 638
L+AARK+AK +++EA DP ++L+GRQLALK SANSVYG+TGA G QLPC+E+S+S+T
Sbjct: 648 LIAARKKAKKEMEEATDPTLISILNGRQLALKTSANSVYGYTGAVAGGQLPCLELSTSIT 707
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGR MI+ TK VE + GY +A+V+YGDTDSVM+QFGV + AMKLG EAA
Sbjct: 708 SYGRAMIDITKNEVEKIYRKENGYSADAKVVYGDTDSVMIQFGVSDIGEAMKLGLEAATS 767
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
IS F+KPIKLEFEKVY P+LL++KKRYAG+ + NP+ +++D KGIETVRRDNCLLV+
Sbjct: 768 ISKLFVKPIKLEFEKVYCPFLLMNKKRYAGVLFKNPQFHERIDCKGIETVRRDNCLLVQK 827
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
+V L KILVD+D+ A QY ++ ISDLL N++DLSLLV++K L K DDY K AHVE
Sbjct: 828 VVDTVLKKILVDKDVEAAKQYTRNVISDLLKNKIDLSLLVVSKSLGK--DDYTAKLAHVE 885
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+R++ RD +APN+GDRV YV+IK AKG Y+R+EDP+YVLENN+ IDT +Y++ +
Sbjct: 886 LAKRLKLRDPGSAPNIGDRVSYVVIKGAKGQPQYDRAEDPLYVLENNLAIDTQHYVDT-L 944
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTL 938
++R+FE ++K+ K L SG HTRS+++ + + + F K+ L C+ CK +I G L
Sbjct: 945 KSSVIRVFEGVMKDPEK-LFSGSHTRSVTVLSVTGGALAGFVKKGLQCMNCKTIIKEGPL 1003
Query: 939 CSHC---KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
C C + E + + + +E E+ + LWTQCQ CQGS QD++CTSRDCPIFYRR
Sbjct: 1004 CKDCSKQENMECSVLINKLHEFREKEIEYNSLWTQCQRCQGSAFQDIICTSRDCPIFYRR 1063
Query: 996 KKAQKDMAEAKLQLDRWNF 1014
K +KD+ Q+ R +
Sbjct: 1064 TKVRKDVNSIGEQIKRLDL 1082
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 166/305 (54%), Gaps = 33/305 (10%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
II++FG T G +V +H F PY Y P+ P+ QI G +N
Sbjct: 101 IIQLFGSTSTGITVLINIHCFFPYLYCEVPKSTPPNPEKIKTQIESGLGATEGKN----- 155
Query: 179 FVRHIEMVQKRSIMYYQ---QQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
V ++++++K SIM+Y+ + + F KI + LP +V +CR +++ G LD +
Sbjct: 156 -VLNVQVLKKESIMHYKGDSEIEDSQFYKITLQLPNLVPTCRSMIENG-NLDCIPQ---- 209
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGK-----------YRKTA-------KTLSYCQ 277
YE+N+ F LR++ID ++ G+W+ +P K ++ + +S CQ
Sbjct: 210 AYEANIPFILRYLIDRDLSTGSWVSIPKQKSYIRLGGQEFDFKDAGFVRISPFQRISSCQ 269
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKG-HFPEPTHDPVIQVANLVTLQ 336
+E D Y D+I G+++ + P RILSFDIEC G FPEP D VIQ++++VTL
Sbjct: 270 IEMDLFYDDLIVLGSSGKWATLPPIRILSFDIECITESGVGFPEPHKDSVIQISSVVTLL 329
Query: 337 GEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLP 396
+ + TLK CA + V FE+E+D+LLAW+DF+ +DPDV+ GYN FD+
Sbjct: 330 DSPESICNVIFTLKECASVAEAFVFWFESEKDMLLAWKDFLLALDPDVITGYNCINFDMN 389
Query: 397 YLIEK 401
YL+E+
Sbjct: 390 YLLER 394
>gi|449709355|gb|EMD48635.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
histolytica KU27]
Length = 1077
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/647 (52%), Positives = 461/647 (71%), Gaps = 34/647 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KE+VH++ I+ L G+ + R R+AVYCLKD YLP +LL+KLM + N EM RVTG+P+S
Sbjct: 433 QKEEVHYADITTLHEGSMDDRNRIAVYCLKDTYLPIKLLEKLMSLVNGFEMCRVTGIPLS 492
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ +KV++QL R A KNL IP ++ + Y GATV+ GFY+ PI+TLD
Sbjct: 493 YLLPRGQQVKVITQLYRHANAKNLFIPFFQRTKTNGDKYVGATVINPIKGFYKVPISTLD 552
Query: 520 FASLYPSIMMAYNLCYSTLV------------------TPEDARKL-----------NLP 550
F+SLYPSIM+++NLCYSTL+ E+ RKL L
Sbjct: 553 FSSLYPSIMISHNLCYSTLIDGIKTRKDIPSIEFLKTSESEEDRKLYDQIMKKLKDKQLN 612
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
E V +P+G+ FVKS+ +KGILPEILE LLAARK+AK D+ A DP + VL+GRQLAL
Sbjct: 613 VEDVELSPNGDLFVKSSKRKGILPEILENLLAARKQAKKDMAAATDPFKITVLNGRQLAL 672
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA +G+LPC++I+SSVTSYGR MIE TK VE+K++ G+ +A+V+Y
Sbjct: 673 KVSANSVYGFTGAQIGKLPCMQIASSVTSYGRTMIELTKTTVEEKYSKKNGFPWDAQVVY 732
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVMV+FG + A++LG+EAA +++ F +PI LEFEKV++PYLLISKKRYAGLY
Sbjct: 733 GDTDSVMVKFGTSDLAEAIRLGKEAAVFVTTKFPRPINLEFEKVFFPYLLISKKRYAGLY 792
Query: 731 WTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMN 790
+ +K+D +DTKGIETVRRDNCLLVK ++ L+KIL+D D+ GA+ +VK+ ISDLL N
Sbjct: 793 FNRADKWDHVDTKGIETVRRDNCLLVKYVIENVLNKILLDSDVEGAISFVKNMISDLLQN 852
Query: 791 RMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAK 850
++DLS+L+I+K L+K +DY K AHVEL +R+R+RD T N GDR+PYVIIK+ K AK
Sbjct: 853 KLDLSMLIISKTLSK--EDYAGKQAHVELVKRIRERDKTTTINTGDRIPYVIIKSTKDAK 910
Query: 851 AYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISIST 910
AYE++EDP+YVLENNIPID YY+ENQ+ KPL RIF+PIL E+ G HTR + T
Sbjct: 911 AYEKAEDPLYVLENNIPIDFDYYIENQLKKPLTRIFKPILGEKVSEIFEGKHTRFVVNIT 970
Query: 911 PS-NSGIMKFAKRQLSCIGCKALI--SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRL 967
P+ N+GIMKFAK C C A++ + GT+C +C + E+Y + + VQ+ E + R+
Sbjct: 971 PTANTGIMKFAKVTKRCAECHAVLKQNEGTICRNCHEKTGEIYARKLVDVQKSENAYHRI 1030
Query: 968 WTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
TQCQEC S H++++C ++DCPIFY R K Q + + + ++ + +
Sbjct: 1031 MTQCQECMQSHHREIICANKDCPIFYMRVKVQHSINQQREMIENFEW 1077
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 189/347 (54%), Gaps = 14/347 (4%)
Query: 68 FASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL----PLSSG-SAAIIRI 122
+ RL + + P Y + I F Q DIDY+ +E PLS G + ++ +
Sbjct: 17 YDKRLDEIKKVP-QREYDPEKDDIEFLQFDIDYINRIVEKEYRIEEDPLSEGYNEPVLYL 75
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQFVR 181
+G T EG SV VHG++PYFYIS + ++ ++ E Q++
Sbjct: 76 YGTTNEGDSVLAMVHGYKPYFYISVEKEYTQQELDELKMKCNQQLHSEVKATGDFEQYIL 135
Query: 182 HIEMVQKR-SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
++E ++ S+M Y +K F+KI + LP V R IL +++ + + TYE++
Sbjct: 136 NMENIKNHHSLMNYNFEKEVFFIKITLRLPKYVPLLRHILQETQRVNN---RHYQTYEAD 192
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKY---RKTAKTLSYCQLEFDCLYSDIISRHPEGEFS 297
+LF LRFM+D +VG +W++VP +Y + A +S CQ E D+++ + E++
Sbjct: 193 LLFVLRFMVDSGLVGCSWVKVPAKRYVLVKDEANKISRCQHEIHLDVKDLLNLGCDNEYT 252
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
K AP RILSFDIECAGRKG FP P DPVIQ+AN V G+ +NV LK C+PI G
Sbjct: 253 KTAPLRILSFDIECAGRKGSFPVPELDPVIQIANYVVEFGKPDVVTKNVFVLKGCSPIPG 312
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
+ ++TE ++L W DFI +D D+ GYNI FD YL+E+ V
Sbjct: 313 AIIYDYDTEEELLKGWSDFINAIDVDIFTGYNIMNFDFKYLLERAKV 359
>gi|67478112|ref|XP_654477.1| DNA polymerase delta catalytic subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56471523|gb|EAL49087.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 1077
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/647 (52%), Positives = 461/647 (71%), Gaps = 34/647 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KE+VH++ I+ L G+ + R R+AVYCLKD YLP +LL+KLM + N EM RVTG+P+S
Sbjct: 433 QKEEVHYADITTLHEGSMDDRNRIAVYCLKDTYLPIKLLEKLMSLVNGFEMCRVTGIPLS 492
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ +KV++QL R A KNL IP ++ + Y GATV+ GFY+ PI+TLD
Sbjct: 493 YLLPRGQQVKVITQLYRHANAKNLFIPFFQRTKTNGDKYVGATVINPIKGFYKVPISTLD 552
Query: 520 FASLYPSIMMAYNLCYSTLV------------------TPEDARKL-----------NLP 550
F+SLYPSIM+++NLCYSTL+ E+ RKL L
Sbjct: 553 FSSLYPSIMISHNLCYSTLIDGIKTRKDIPSIEFLKTSESEEDRKLYDQIMKKLKDKQLN 612
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
E V +P+G+ FVKS+ +KGILPEILE LLAARK+AK D+ A DP + VL+GRQLAL
Sbjct: 613 VEDVELSPNGDLFVKSSKRKGILPEILENLLAARKQAKKDMAAATDPFKITVLNGRQLAL 672
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA +G+LPC++I+SSVTSYGR MIE TK VE+K++ G+ +A+V+Y
Sbjct: 673 KVSANSVYGFTGAQIGKLPCMQIASSVTSYGRTMIELTKTTVEEKYSKKNGFPWDAQVVY 732
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVMV+FG + A++LG+EAA +++ F +PI LEFEKV++PYLLISKKRYAGLY
Sbjct: 733 GDTDSVMVKFGTSDLAEAIRLGKEAAVFVTTKFPRPINLEFEKVFFPYLLISKKRYAGLY 792
Query: 731 WTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMN 790
+ +K+D +DTKGIETVRRDNCLLVK ++ L+KIL+D D+ GA+ +VK+ ISDLL N
Sbjct: 793 FNRADKWDHVDTKGIETVRRDNCLLVKYVIENVLNKILLDSDVEGAISFVKNMISDLLQN 852
Query: 791 RMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAK 850
++DLS+L+I+K L+K +DY K AHVEL +R+R+RD T N GDR+PYVIIK+ K AK
Sbjct: 853 KLDLSMLIISKTLSK--EDYAGKQAHVELVKRIRERDKTTTINTGDRIPYVIIKSTKDAK 910
Query: 851 AYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISIST 910
AYE++EDP+YVLENNIPID YY+ENQ+ KPL RIF+PIL E+ G HTR + T
Sbjct: 911 AYEKAEDPLYVLENNIPIDFDYYIENQLKKPLTRIFKPILGEKVSEIFEGKHTRFVVNIT 970
Query: 911 PS-NSGIMKFAKRQLSCIGCKALI--SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRL 967
P+ N+GIMKFAK C C A++ + GT+C +C + E+Y + + VQ+ E + R+
Sbjct: 971 PTANTGIMKFAKVTKRCAECHAVLKQNEGTICRNCHEKTGEIYARKLVDVQKSENAYHRI 1030
Query: 968 WTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
TQCQEC S H++++C ++DCPIFY R K Q + + + ++ + +
Sbjct: 1031 MTQCQECMQSHHREIICANKDCPIFYMRVKVQHSINQQREMIENFEW 1077
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 188/347 (54%), Gaps = 14/347 (4%)
Query: 68 FASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL----PLSSG-SAAIIRI 122
+ RL + + P Y + I F Q DIDY+ +E PLS G + ++ +
Sbjct: 17 YDKRLDEIKKVP-QREYDPEKDDIEFLQFDIDYINRIVEKEYRIEEDPLSEGYNEPVLYL 75
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQFVR 181
+G T EG SV VHG++PYFYIS + ++ ++ E Q++
Sbjct: 76 YGTTNEGDSVLAMVHGYKPYFYISVEKEYTQQELDELKMKCNQQLHSEVKATGDFEQYIL 135
Query: 182 HIEMVQKR-SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
++E ++ S+M Y +K F+KI + LP V R IL +++ + + TYE++
Sbjct: 136 NMENIKNHHSLMNYNFEKEVFFIKITLRLPKYVPLLRHILQETQRVNN---RHYQTYEAD 192
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKY---RKTAKTLSYCQLEFDCLYSDIISRHPEGEFS 297
+LF LRFM+D +VG +W++VP +Y + A +S CQ E D+++ + E++
Sbjct: 193 LLFVLRFMVDSGLVGCSWVKVPAKRYVLVKDEANKISRCQHEIHLDVKDLLNLGCDNEYT 252
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
K AP RILSFDIECAGRKG FP P DPVIQ+AN V G +NV LK C+PI G
Sbjct: 253 KTAPLRILSFDIECAGRKGSFPVPELDPVIQIANYVVEFGRPDVVTKNVFVLKGCSPIPG 312
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
+ ++TE ++L W DFI +D D+ GYNI FD YL+E+ V
Sbjct: 313 AIIYDYDTEEELLKGWSDFINAIDVDIFTGYNIMNFDFKYLLERAKV 359
>gi|407045124|gb|EKE43021.1| DNA polymerase delta catalytic subunit, putative [Entamoeba nuttalli
P19]
Length = 1077
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/647 (52%), Positives = 461/647 (71%), Gaps = 34/647 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KE+VH++ I+ L G+ + R R+AVYCLKD YLP +LL+KLM + N EM RVTG+P+S
Sbjct: 433 QKEEVHYADITTLHEGSMDDRNRIAVYCLKDTYLPIKLLEKLMSLVNGFEMCRVTGIPLS 492
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ +KV++QL R A KNL IP ++ + Y GATV+ GFY+ PI+TLD
Sbjct: 493 YLLPRGQQVKVITQLYRHANAKNLFIPFFQRTKTNGDKYVGATVINPIKGFYKVPISTLD 552
Query: 520 FASLYPSIMMAYNLCYSTLV------------------TPEDARKL-----------NLP 550
F+SLYPSIM+++NLCYSTL+ E+ RKL L
Sbjct: 553 FSSLYPSIMISHNLCYSTLIDGIKTRKDVPSIEFLKTSESEEDRKLYDQIMKKLKDKQLN 612
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
E V +P+G+ FVKS+ +KGILPEILE LLAARK+AK D+ A DP + VL+GRQLAL
Sbjct: 613 VEDVELSPNGDLFVKSSKRKGILPEILENLLAARKQAKKDMAAATDPFKITVLNGRQLAL 672
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA +G+LPC++I+SSVTSYGR MIE TK VE+K++ G+ +A+V+Y
Sbjct: 673 KVSANSVYGFTGAQIGKLPCMQIASSVTSYGRTMIELTKTTVEEKYSKKNGFPWDAQVVY 732
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVMV+FG + A++LG+EAA +++ F +PI LEFEKV++PYLLISKKRYAGLY
Sbjct: 733 GDTDSVMVKFGTSDLAEAIRLGKEAAVFVTTKFPRPINLEFEKVFFPYLLISKKRYAGLY 792
Query: 731 WTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMN 790
+ +K+D +DTKGIETVRRDNCLLVK ++ L+KIL+D D+ GA+ +VK+ ISDLL N
Sbjct: 793 FNRADKWDHVDTKGIETVRRDNCLLVKYVIENVLNKILLDSDVEGAISFVKNMISDLLQN 852
Query: 791 RMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAK 850
++DLS+L+I+K L+K +DY K AHVEL +R+R+RD T N GDR+PYVIIK+ K AK
Sbjct: 853 KLDLSMLIISKTLSK--EDYAGKQAHVELVKRIRERDKTTTINTGDRIPYVIIKSTKDAK 910
Query: 851 AYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISIST 910
AYE++EDP+YVLENNIPID YY+ENQ+ KPL RIF+PIL E+ G HTR + T
Sbjct: 911 AYEKAEDPLYVLENNIPIDFDYYIENQLKKPLTRIFKPILGEKVSEIFEGKHTRFVVNIT 970
Query: 911 PS-NSGIMKFAKRQLSCIGCKALI--SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRL 967
P+ N+GIMKFAK C C A++ + GT+C +C + E+Y + + VQ+ E + R+
Sbjct: 971 PTANTGIMKFAKVTKRCAECHAVLKQNEGTICRNCHEKTGEIYARKLIDVQKSENAYHRI 1030
Query: 968 WTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
TQCQEC S H++++C ++DCPIFY R K Q + + + ++ + +
Sbjct: 1031 MTQCQECMQSHHREIICANKDCPIFYMRVKVQHSINQQREMIENFEW 1077
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 189/347 (54%), Gaps = 14/347 (4%)
Query: 68 FASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL----PLSSG-SAAIIRI 122
+ RL + + P Y + I F Q DIDY+ +E PLS G + ++ +
Sbjct: 17 YDKRLDEIKKVP-QREYDPEKDDIEFLQFDIDYINRIVEKEYRIEEDPLSEGYNEPVLYL 75
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQFVR 181
+G T EG SV VHG++PYFYIS + ++ ++ E Q++
Sbjct: 76 YGTTNEGDSVLAMVHGYKPYFYISVEKEYTQQELDELKLKCNQQLHSEVKATGDFEQYIL 135
Query: 182 HIEMVQKR-SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
H+E ++ S+M Y +K F+KI + LP V R IL +++ + + TYE++
Sbjct: 136 HMENIKNHHSLMNYNFEKEVFFIKITLRLPKYVPLLRHILQETQRVNN---RQYQTYEAD 192
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKY---RKTAKTLSYCQLEFDCLYSDIISRHPEGEFS 297
+LF LRFM+D +VG +W++VP +Y + A +S CQ E D+++ + E++
Sbjct: 193 LLFVLRFMVDSGLVGCSWVKVPAKRYVLVKDEANKISRCQHEIHLDVKDLLNLGCDNEYT 252
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
K AP RILSFDIECAGRKG FP P DPVIQ+AN V G+ +NV LK C+PI G
Sbjct: 253 KTAPLRILSFDIECAGRKGSFPVPELDPVIQIANYVVEFGKPDVVTKNVFVLKGCSPIPG 312
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
+ ++TE ++L W DFI +D D+ GYNI FD YL+E+ V
Sbjct: 313 AIIYDYDTEEELLKGWSDFINAIDVDIFTGYNIMNFDFKYLLERAKV 359
>gi|167380902|ref|XP_001735501.1| DNA polymerase delta catalytic subunit [Entamoeba dispar SAW760]
gi|165902501|gb|EDR28305.1| DNA polymerase delta catalytic subunit, putative [Entamoeba dispar
SAW760]
Length = 1077
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/647 (52%), Positives = 459/647 (70%), Gaps = 34/647 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KE+VH++ I+ L G+ + R R+AVYCLKD YLP +LL+KLM + N EM RVTG+P+S
Sbjct: 433 QKEEVHYADITTLHEGSMDDRNRIAVYCLKDTYLPIKLLEKLMSLVNGFEMCRVTGIPLS 492
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ +KV++QL R A K L IP ++ + Y GATV+ GFY+ PI+TLD
Sbjct: 493 YLLPRGQQVKVITQLYRHANAKKLFIPFFQRTKTNGDKYVGATVISPIKGFYKVPISTLD 552
Query: 520 FASLYPSIMMAYNLCYSTLV------------------TPEDARKL-----------NLP 550
F+SLYPSIM+++NLCYSTL+ E+ RK+ L
Sbjct: 553 FSSLYPSIMISHNLCYSTLIDGIKTRKDVPSIEFLKTSESEEDRKMYDQIMKKLKEKQLN 612
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
E V +P+G+ FVKS+ +KGILPEILE LLAARK+AK D+ A DP + VL+GRQLAL
Sbjct: 613 VEDVELSPNGDLFVKSSKRKGILPEILENLLAARKQAKKDMAAATDPFKITVLNGRQLAL 672
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA +G+LPC++I+SSVTSYGR MIE TK VE+K++ G+ +A+V+Y
Sbjct: 673 KVSANSVYGFTGAQIGKLPCMQIASSVTSYGRTMIELTKTTVEEKYSKKNGFPWDAQVVY 732
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVMV+FG P + A++LG+EAA +++ F +PI LEFEKV++PYLLISKKRYAGLY
Sbjct: 733 GDTDSVMVKFGTPDLAEAIRLGKEAAVFVTTKFPRPINLEFEKVFFPYLLISKKRYAGLY 792
Query: 731 WTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMN 790
+ +K+D +DTKGIETVRRDNCLLVK ++ L+KIL+D D+ GA+ +VK+ ISDLL N
Sbjct: 793 FNRVDKWDHVDTKGIETVRRDNCLLVKYVIENVLNKILLDSDVEGAINFVKNMISDLLQN 852
Query: 791 RMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAK 850
++DLS+L+I+K L+K +DY K AHVEL +R+R+RD N GDR+PYVIIK+ K AK
Sbjct: 853 KLDLSMLIISKTLSK--EDYAGKQAHVELVKRIRERDKTATINTGDRIPYVIIKSTKDAK 910
Query: 851 AYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISIST 910
AYE++EDP+YVLENNIPID YY+ENQ+ KPL RIF+PIL E+ G HTR + T
Sbjct: 911 AYEKAEDPLYVLENNIPIDFDYYIENQLKKPLTRIFKPILGEKVSEIFEGKHTRFVVNIT 970
Query: 911 PS-NSGIMKFAKRQLSCIGCKALI--SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRL 967
P+ N+GIMKFAK C C A++ GT+C +C + E+Y K + VQ+ E + R+
Sbjct: 971 PTANTGIMKFAKVTKRCAECHAVLKKDEGTICRNCHEKTGEIYAKKLVDVQKSENAYHRI 1030
Query: 968 WTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
TQCQEC S H++++C ++DCPIFY R K Q + + + ++ + +
Sbjct: 1031 MTQCQECMQSHHREIICANKDCPIFYMRVKVQHSINQQREMIENFEW 1077
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 182/331 (54%), Gaps = 13/331 (3%)
Query: 84 YVSQCQSIMFQQLDIDYVIGDSNRELL----PLSSG-SAAIIRIFGVTREGHSVCCKVHG 138
Y + I F Q DIDY+ +E PLS G + ++ ++G T EG SV VHG
Sbjct: 32 YNPEKDDIEFLQFDIDYINRIVEKEYRIEEDPLSEGYNEPVLYLYGTTNEGDSVLAMVHG 91
Query: 139 FEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQFVRHIEMVQK-RSIMYYQQ 196
++PYFYIS + ++ ++ E Q++ +E V+ S+M Y
Sbjct: 92 YKPYFYISVEKEYTQQELDELKMKCNQQLHSEVKATGDFEQYILLMENVKGYHSLMNYNF 151
Query: 197 QKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGG 256
+K F+KI + LP V R IL +++ + + TYE+++LF LRFM+D +VG
Sbjct: 152 EKETFFVKITLRLPKYVPVLRHILQETQRINN---RHYQTYEADLLFVLRFMVDAGLVGC 208
Query: 257 NWIEVPVGKY---RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAG 313
+W++VP +Y + A +S CQ E D+++ + E++K AP RILSFDIECAG
Sbjct: 209 SWVKVPAKRYILVKDEANKISRCQHEIHLDVKDLLNLGCDNEYTKTAPLRILSFDIECAG 268
Query: 314 RKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAW 373
RKG FP P DPVIQ+AN V G+ +NV LK C+PI G + ++TE ++L W
Sbjct: 269 RKGSFPVPELDPVIQIANYVVEFGKPDIITKNVFVLKGCSPIPGAIIYDYDTEEELLKGW 328
Query: 374 RDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
DFI +D DV GYNI FD YL+E+ V
Sbjct: 329 SDFINAIDVDVFTGYNIMNFDFKYLLERAKV 359
>gi|410084320|ref|XP_003959737.1| hypothetical protein KAFR_0K02460 [Kazachstania africana CBS 2517]
gi|372466329|emb|CCF60602.1| hypothetical protein KAFR_0K02460 [Kazachstania africana CBS 2517]
Length = 1132
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/617 (55%), Positives = 450/617 (72%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SII+DLQ+G++ETRRRLAVYCLKDAYLP RLL+KLM + NY EMARVTGVP S
Sbjct: 525 QKEDVHYSIITDLQHGDSETRRRLAVYCLKDAYLPLRLLEKLMALVNYTEMARVTGVPFS 584
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK Q + VIPN++ GS++ YEGATV+E G+Y+ PIATLD
Sbjct: 585 YLLARGQQIKVVSQLFRKCIQIDTVIPNMQSQGSDE-QYEGATVIEPIRGYYDVPIATLD 643
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL +L L + TP+G+ FV L++GILP ILE
Sbjct: 644 FNSLYPSIMMAHNLCYTTLCNKATVERLKLKKDKDYIITPNGDYFVSDKLRRGILPIILE 703
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 704 ELISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 763
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GR+MI TK V++K++ GY+H+A+V+YGDTDSVMV+FG ++ AM LG EAA Y
Sbjct: 764 AFGREMIMRTKTAVQEKYSVKNGYKHDAQVVYGDTDSVMVKFGTTDLQEAMDLGAEAAAY 823
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+PYLLI+KKRYAGLYWT EK+DK+D KG+ +VRRD+C LV
Sbjct: 824 VSTLFKHPINLEFEKAYFPYLLINKKRYAGLYWTKVEKYDKLDQKGLASVRRDSCSLVSI 883
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+ RD+ GA+++VK TI D+L NR+D+S L+I+K L +Y H
Sbjct: 884 VMNKVLKMILIGRDVDGALEFVKKTIGDILHNRVDISKLIISKTL---APNYTNPQPHAV 940
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA+RM+KRD PNVGDRV YVI K Y R+EDP+YVLE N+ +D+ YYL+NQ+
Sbjct: 941 LADRMKKRD-GIGPNVGDRVDYVI--TGGNDKLYNRAEDPLYVLEQNLQVDSKYYLQNQL 997
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPS-NSGIMKFAKRQLSCIGCKALISNG- 936
P++ I PI+ K+ S +SI I+T S G+M F K+ C GC+ + G
Sbjct: 998 QNPVISIIAPII--GEKQANSMFVVKSIKINTGSAKGGLMGFIKKVAVCKGCRGPLKKGE 1055
Query: 937 -TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LCS+C R ELY K + +V++LE F RLWTQCQ C G+LH +VLC++++C IFY R
Sbjct: 1056 SALCSNCLSRSGELYMKALYEVRDLEEKFSRLWTQCQRCAGNLHTEVLCSNKNCDIFYMR 1115
Query: 996 KKAQKDMAEAKLQLDRW 1012
K +K++ E QL +W
Sbjct: 1116 VKVKKELQEKMEQLSKW 1132
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/330 (41%), Positives = 193/330 (58%), Gaps = 15/330 (4%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
++R PL + + + I FQQ+D + I ++ + ++ I+R FGVT GHSV C
Sbjct: 132 YSRDPLPADFTPETHDISFQQIDAEQSIIPGFKD-----ANTSTIVRFFGVTNTGHSVLC 186
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V GF+ Y Y+ P +D + ++ + E N+ V IE+V K+SI Y
Sbjct: 187 NVTGFKHYLYVPQPSIDNANDPQQREEFVK-YLNEMFDNA-----VDSIEVVPKQSIWGY 240
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNI 253
PF K+ P++V R +RG + + TY+ N+ + LR M+DC I
Sbjct: 241 SGDDKIPFWKVYATYPSIVNKLRTAFERGHLTFNSWFSNGTTTYD-NIAYPLRLMVDCGI 299
Query: 254 VGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC 311
VG +WI +P KY K +S CQLE + Y D+I+ EG++S AP RILSFDIEC
Sbjct: 300 VGMSWITLPKNKYTIIPENKRVSTCQLEVNINYKDLIAHPAEGDWSHSAPLRILSFDIEC 359
Query: 312 AGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLL 371
AGR G FPEP HD VIQ+AN++++ G K+PF+RNV T+ +CAPI G + S ETE ++L
Sbjct: 360 AGRIGVFPEPEHDSVIQIANVMSIAGAKKPFVRNVFTVDTCAPITGSRIYSHETEAEMLS 419
Query: 372 AWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
WRDFI E DPDV+IGYN FD+PYLI +
Sbjct: 420 HWRDFIVEADPDVIIGYNTGNFDIPYLINR 449
>gi|254577417|ref|XP_002494695.1| ZYRO0A07524p [Zygosaccharomyces rouxii]
gi|238937584|emb|CAR25762.1| ZYRO0A07524p [Zygosaccharomyces rouxii]
Length = 1090
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/618 (56%), Positives = 449/618 (72%), Gaps = 15/618 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+ LQ G++ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 483 QKEDVHHSIITSLQKGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFS 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
+LLSRGQ IKV+SQL RK Q + VIPN++ QA EQ YEGATV+E G+Y+ PIATL
Sbjct: 543 YLLSRGQQIKVISQLFRKCLQIDTVIPNMQSQASDEQ--YEGATVIEPIRGYYDIPIATL 600
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEIL 577
DF+SLYPSIMMA+NLCY+TL + K N+ E TP+G+ FV S +++GILP IL
Sbjct: 601 DFSSLYPSIMMAHNLCYTTLTSKSTVEKFNMKLDEDYIMTPNGDYFVTSKVRRGILPTIL 660
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
EEL+ ARKRAK DLK +P K VL+GRQLALK+SANSVYGFTGATVG+LPC+ ISSSV
Sbjct: 661 EELIGARKRAKKDLKNETEPFRKDVLNGRQLALKVSANSVYGFTGATVGKLPCLAISSSV 720
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TS+GR MI TK+ VE+K++ G++H++ V+YGDTDSVMV+FG ++ AMKLG EAA
Sbjct: 721 TSFGRNMIMLTKQAVEEKYSIKNGFKHDSLVVYGDTDSVMVKFGTTDLKEAMKLGAEAAA 780
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
Y+S F PI LEFEK Y+PYLLI+KKRYAGL+WTNP+K+DK+D KG+ +VRRD+C LV
Sbjct: 781 YVSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDKYDKIDQKGLASVRRDSCPLVS 840
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ + L KIL++R++ GA+ +VK I D+L N+ D+S L+I+K L +Y H
Sbjct: 841 IVMNKVLKKILIERNVEGALGFVKEIIDDILHNKADISKLIISKTL---APNYTNPQPHA 897
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
L ERM+KRD PNVGDRV YV+I A K Y R+EDP+YVLE+N+ ID+ YYL NQ
Sbjct: 898 VLTERMKKRDGV-GPNVGDRVDYVVI--AGNDKLYNRAEDPLYVLEHNMQIDSRYYLTNQ 954
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPS-NSGIMKFAKRQLSCIGCKALISNG 936
+ P++ I PIL K+ + +SI I+T + G+M F K+ SC CK + G
Sbjct: 955 LQNPIISIVAPIL--GEKQANAMFVVKSIKINTGNMKGGLMGFVKKVDSCKNCKGPLKKG 1012
Query: 937 T--LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LCS+C+ + ELY K + V++LE FGRLWTQCQ C GSLH +VLC++++C IFY
Sbjct: 1013 EGPLCSNCQAKSGELYIKALYNVRDLEEKFGRLWTQCQRCAGSLHNEVLCSNKNCDIFYM 1072
Query: 995 RKKAQKDMAEAKLQLDRW 1012
R K +K++ E L +W
Sbjct: 1073 RVKMKKELQENIENLSKW 1090
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 198/355 (55%), Gaps = 24/355 (6%)
Query: 54 EESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLS 113
EE L L D + + K+ R PL + + I FQQL+ + + LP S
Sbjct: 70 EEQLSLMD-HKEAEVGEHKEKYGRDPLPKDFNPETHEISFQQLE-------AEQSTLPFS 121
Query: 114 --SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYI---SCPQGMGPDDISHFHQILEGRMR 168
G++ I+R FGVT++GHS+ C V GF+ Y Y+ S P+ P++++ F + L
Sbjct: 122 KDEGTSTIVRFFGVTKDGHSILCNVTGFKHYLYVPVPSAPEAQDPNEVASFTKYL----- 176
Query: 169 EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDG 228
N V I++V K+SI Y+ + PF ++ V P V R ++G
Sbjct: 177 ----NENFENSVDRIDIVSKQSIWGYEGESMLPFYQVFVTNPNTVNKMRTAFEKGYLSHK 232
Query: 229 LGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSD 286
+ T N+ F LR MIDC I G +WI +P G+Y+ + +S CQLE Y
Sbjct: 233 SWFSAGTTTYDNIAFTLRMMIDCGISGMSWITLPKGEYQLVPEHERVSTCQLEVTINYRK 292
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
++S E E+S+ +P RILSFDIEC+GR G FPEP DPVIQ+AN++++ G K+PFIRNV
Sbjct: 293 LVSHPAENEWSQASPLRILSFDIECSGRPGIFPEPETDPVIQIANVMSVAGAKKPFIRNV 352
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
T+ +C+PI G + S TE ++L WRDF+ DPD++IGYN FD PYLI +
Sbjct: 353 FTVDTCSPITGSQIYSHATEEEMLKHWRDFVVAADPDIIIGYNTSNFDFPYLINR 407
>gi|151941901|gb|EDN60257.1| DNA polymerase III catalytic (delta) subunit [Saccharomyces
cerevisiae YJM789]
Length = 1097
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/617 (55%), Positives = 449/617 (72%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIISDLQNG++ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 490 QKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + + VIPN++ S+ YEGATV+E G+Y+ PIATLD
Sbjct: 550 YLLARGQQIKVVSQLFRKCLEIDTVIPNMQSQASDD-QYEGATVIEPIRGYYDVPIATLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL +LNL E TP+G+ FV + ++GILP IL+
Sbjct: 609 FNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVITPNGDYFVTTKRRRGILPIILD 668
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 669 ELISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 728
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MI TK V++K+ GY+H+A V+YGDTDSVMV+FG ++ AM LG EAA Y
Sbjct: 729 AYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLKEAMDLGTEAAKY 788
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+PYLLI+KKRYAGL+WTNP+KFDK+D KG+ +VRRD+C LV
Sbjct: 789 VSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDKFDKLDQKGLASVRRDSCSLVSI 848
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL++R++ GA+ +V+ TI+D+L NR+D+S L+I+K L +Y H
Sbjct: 849 VMNKVLKKILIERNVDGALAFVRETINDILHNRVDISKLIISKTL---APNYTNPQPHAV 905
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++R+ PNVGDRV YVII K Y R+EDP++VLENNI +D+ YYL NQ+
Sbjct: 906 LAERMKRREGV-GPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQL 962
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALI--SN 935
P++ I PI+ K+ +SI I+T S G+M F K+ +C CK +
Sbjct: 963 QNPIISIVAPII--GDKQANGMFVVKSIKINTGSQKGGLMSFIKKVEACKSCKGPLRKGE 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G LCS+C R ELY K + V++LE + RLWTQCQ C G+LH +VLC++++C IFY R
Sbjct: 1021 GPLCSNCLARSGELYIKALYDVRDLEEKYSRLWTQCQRCAGNLHSEVLCSNKNCDIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRW 1012
K +K++ E QL +W
Sbjct: 1081 VKVKKELQEKVEQLSKW 1097
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 203/364 (55%), Gaps = 20/364 (5%)
Query: 46 DETLLPEDEESLILRDIEQ-RQDFASR----LAKWARPPLSSGYVSQCQSIMFQQLDIDY 100
D L+ ES +++ Q D A R L+ + R L + + I FQQ+D +
Sbjct: 63 DTDLMGTQLESTFEQELSQMEHDMADREEHDLSSFERKKLPTDFDPSLYDISFQQIDAEQ 122
Query: 101 VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFH 160
+ + ++ ++ ++R FGVT EGHSV C V GF+ Y Y+ P +D +
Sbjct: 123 SVLNGIKD-----ENTSTVVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSSDANDQEQIN 177
Query: 161 QILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL 220
+ + N + IE+V K+SI Y PF KI V P MV R
Sbjct: 178 KFVH------YLNETFDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAF 231
Query: 221 DRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQ 277
+RG + + TY+ N+ + LR M+DC IVG +WI +P GKY + +S CQ
Sbjct: 232 ERGHLSFNSWFSNGTTTYD-NIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNNRVSSCQ 290
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 337
LE Y ++I+ EG++S AP RI+SFDIECAGR G FPEP +DPVIQ+AN+V++ G
Sbjct: 291 LEVSINYRNLIAHPAEGDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAG 350
Query: 338 EKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY 397
K+PFIRNV TL +C+PI G + S TE ++L WR+FI +VDPDV+IGYN FD+PY
Sbjct: 351 AKKPFIRNVFTLNTCSPITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPY 410
Query: 398 LIEK 401
L+ +
Sbjct: 411 LLNR 414
>gi|256274101|gb|EEU09012.1| Pol3p [Saccharomyces cerevisiae JAY291]
Length = 1097
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/617 (55%), Positives = 449/617 (72%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIISDLQNG++ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 490 QKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + + VIPN++ S+ YEGATV+E G+Y+ PIATLD
Sbjct: 550 YLLARGQQIKVVSQLFRKCLEIDTVIPNMQSQASDD-QYEGATVIEPIRGYYDVPIATLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL +LNL E TP+G+ FV + ++GILP IL+
Sbjct: 609 FNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVITPNGDYFVTTKRRRGILPIILD 668
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 669 ELISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 728
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MI TK V++K+ GY+H+A V+YGDTDSVMV+FG ++ AM LG EAA Y
Sbjct: 729 AYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLKEAMDLGTEAAKY 788
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+PYLLI+KKRYAGL+WTNP+KFDK+D KG+ +VRRD+C LV
Sbjct: 789 VSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDKFDKLDQKGLASVRRDSCSLVSI 848
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL++R++ GA+ +V+ TI+D+L NR+D+S L+I+K L +Y H
Sbjct: 849 VMNKVLKKILIERNVDGALAFVRETINDILHNRVDISKLIISKTL---APNYTNPQPHAV 905
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++R+ PNVGDRV YVII K Y R+EDP++VLENNI +D+ YYL NQ+
Sbjct: 906 LAERMKRREGV-GPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQL 962
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALI--SN 935
P++ I PI+ K+ +SI I+T S G+M F K+ +C CK +
Sbjct: 963 QNPIISIVAPII--GDKQANGMFVVKSIKINTGSQKGGLMSFIKKVEACKSCKGPLRKGE 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G LCS+C R ELY K + V++LE + RLWTQCQ C G+LH +VLC++++C IFY R
Sbjct: 1021 GPLCSNCLARSGELYIKALYDVRDLEEKYSRLWTQCQRCAGNLHSEVLCSNKNCDIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRW 1012
K +K++ E QL +W
Sbjct: 1081 VKVKKELQEKVEQLSKW 1097
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 203/364 (55%), Gaps = 20/364 (5%)
Query: 46 DETLLPEDEESLILRDIEQ-RQDFASR----LAKWARPPLSSGYVSQCQSIMFQQLDIDY 100
D L+ ES +++ Q D A + L+ + R L + + I FQQ+D +
Sbjct: 63 DTDLMGTQLESTFEQELSQMEHDMADQEEHDLSSFERKKLPTDFDPSLYDISFQQIDAEQ 122
Query: 101 VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFH 160
+ + ++ ++ ++R FGVT EGHSV C V GF+ Y Y+ P +D +
Sbjct: 123 NVLNGIKD-----ENTSTVVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSSDANDQEQIN 177
Query: 161 QILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL 220
+ + N + IE+V K+SI Y PF KI V P MV R
Sbjct: 178 KFVH------YLNETFDHAIDSIEVVSKQSIWGYSGGTKLPFWKIYVTYPHMVNKLRTAF 231
Query: 221 DRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQ 277
+RG + + TY+ N+ + LR M+DC IVG +WI +P GKY + +S CQ
Sbjct: 232 ERGHLSFNSWFSNGTTTYD-NIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNNRVSSCQ 290
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 337
LE Y ++I+ EG++S AP RI+SFDIECAGR G FPEP +DPVIQ+AN+V++ G
Sbjct: 291 LEVSINYRNLIAHPAEGDWSYTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAG 350
Query: 338 EKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY 397
K+PFIRNV TL +C+PI G + S TE ++L WR+FI +VDPDV+IGYN FD+PY
Sbjct: 351 AKKPFIRNVFTLNTCSPITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPY 410
Query: 398 LIEK 401
L+ +
Sbjct: 411 LLNR 414
>gi|392300015|gb|EIW11106.1| Pol3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1097
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/617 (55%), Positives = 449/617 (72%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIISDLQNG++ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 490 QKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + + VIPN++ S+ YEGATV+E G+Y+ PIATLD
Sbjct: 550 YLLARGQQIKVVSQLFRKCLEIDTVIPNMQSQASDD-QYEGATVIEPIRGYYDVPIATLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL +LNL E TP+G+ FV + ++GILP IL+
Sbjct: 609 FNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVITPNGDYFVTTKRRRGILPIILD 668
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 669 ELISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 728
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MI TK V++K+ GY+H+A V+YGDTDSVMV+FG ++ AM LG EAA Y
Sbjct: 729 AYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLKEAMDLGTEAAKY 788
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+PYLLI+KKRYAGL+WTNP+KFDK+D KG+ +VRRD+C LV
Sbjct: 789 VSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDKFDKLDQKGLASVRRDSCSLVSI 848
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL++R++ GA+ +V+ TI+D+L NR+D+S L+I+K L +Y H
Sbjct: 849 VMNKVLKKILIERNVDGALAFVRETINDILHNRVDISKLIISKTL---APNYTNPQPHAV 905
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++R+ PNVGDRV YVII K Y R+EDP++VLENNI +D+ YYL NQ+
Sbjct: 906 LAERMKRREGV-GPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQL 962
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALI--SN 935
P++ I PI+ K+ +SI I+T S G+M F K+ +C CK +
Sbjct: 963 QNPIISIVAPII--GDKQANGMFVVKSIKINTGSQKGGLMSFIKKVEACKSCKGPLRKGE 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G LCS+C R ELY K + V++LE + RLWTQCQ C G+LH +VLC++++C IFY R
Sbjct: 1021 GPLCSNCLARSGELYIKALYDVRDLEEKYSRLWTQCQRCAGNLHSEVLCSNKNCDIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRW 1012
K +K++ E QL +W
Sbjct: 1081 VKVKKELQEKVEQLSKW 1097
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/353 (39%), Positives = 199/353 (56%), Gaps = 17/353 (4%)
Query: 52 EDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP 111
E E S + DI +++ L+ + R L + + I FQQ+D + + + ++
Sbjct: 76 EQELSQMEHDIADQEE--HDLSSFERKKLPTDFDPSLYDISFQQIDAEQSVLNGIKD--- 130
Query: 112 LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN 171
++ ++R FGVT EGHSV C V GF+ Y Y+ P +D ++ +
Sbjct: 131 --ENTSTVVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSSDANDQEQINKFVH------Y 182
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLG 230
N + IE+V K+SI Y PF KI V P MV R +RG + +
Sbjct: 183 LNETFDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWF 242
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDII 288
TY+ N+ + LR M+DC IVG +WI +P GKY + +S CQLE Y ++I
Sbjct: 243 SNGTTTYD-NIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNNRVSSCQLEVSINYRNLI 301
Query: 289 SRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMT 348
+ EG++S AP RI+SFDIECAGR G FPEP +DPVIQ+AN+V++ G K+PFIRNV T
Sbjct: 302 AHPAEGDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKPFIRNVFT 361
Query: 349 LKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
L +C+ I G + S TE ++L WR+FI +VDPDV+IGYN FD+PYL+ +
Sbjct: 362 LNTCSHITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNR 414
>gi|330443503|ref|NP_010181.2| Pol3p [Saccharomyces cerevisiae S288c]
gi|341940645|sp|P15436.4|DPOD_YEAST RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|4191|emb|CAA43922.1| DNA polymerase III catalytic subunit [Saccharomyces cerevisiae]
gi|329138870|tpg|DAA11758.2| TPA: Pol3p [Saccharomyces cerevisiae S288c]
Length = 1097
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/617 (55%), Positives = 449/617 (72%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIISDLQNG++ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 490 QKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + + VIPN++ S+ YEGATV+E G+Y+ PIATLD
Sbjct: 550 YLLARGQQIKVVSQLFRKCLEIDTVIPNMQSQASDD-QYEGATVIEPIRGYYDVPIATLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL +LNL E TP+G+ FV + ++GILP IL+
Sbjct: 609 FNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVITPNGDYFVTTKRRRGILPIILD 668
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 669 ELISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 728
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MI TK V++K+ GY+H+A V+YGDTDSVMV+FG ++ AM LG EAA Y
Sbjct: 729 AYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLKEAMDLGTEAAKY 788
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+PYLLI+KKRYAGL+WTNP+KFDK+D KG+ +VRRD+C LV
Sbjct: 789 VSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDKFDKLDQKGLASVRRDSCSLVSI 848
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL++R++ GA+ +V+ TI+D+L NR+D+S L+I+K L +Y H
Sbjct: 849 VMNKVLKKILIERNVDGALAFVRETINDILHNRVDISKLIISKTL---APNYTNPQPHAV 905
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++R+ PNVGDRV YVII K Y R+EDP++VLENNI +D+ YYL NQ+
Sbjct: 906 LAERMKRREGV-GPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQL 962
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALI--SN 935
P++ I PI+ K+ +SI I+T S G+M F K+ +C CK +
Sbjct: 963 QNPIISIVAPII--GDKQANGMFVVKSIKINTGSQKGGLMSFIKKVEACKSCKGPLRKGE 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G LCS+C R ELY K + V++LE + RLWTQCQ C G+LH +VLC++++C IFY R
Sbjct: 1021 GPLCSNCLARSGELYIKALYDVRDLEEKYSRLWTQCQRCAGNLHSEVLCSNKNCDIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRW 1012
K +K++ E QL +W
Sbjct: 1081 VKVKKELQEKVEQLSKW 1097
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 203/364 (55%), Gaps = 20/364 (5%)
Query: 46 DETLLPEDEESLILRDIEQ-RQDFASR----LAKWARPPLSSGYVSQCQSIMFQQLDIDY 100
D L+ ES +++ Q D A + L+ + R L + + I FQQ+D +
Sbjct: 63 DTDLMGTQLESTFEQELSQMEHDMADQEEHDLSSFERKKLPTDFDPSLYDISFQQIDAEQ 122
Query: 101 VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFH 160
+ + ++ ++ ++R FGVT EGHSV C V GF+ Y Y+ P +D +
Sbjct: 123 SVLNGIKD-----ENTSTVVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSSDANDQEQIN 177
Query: 161 QILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL 220
+ + N + IE+V K+SI Y PF KI V P MV R
Sbjct: 178 KFVH------YLNETFDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAF 231
Query: 221 DRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQ 277
+RG + + TY+ N+ + LR M+DC IVG +WI +P GKY + +S CQ
Sbjct: 232 ERGHLSFNSWFSNGTTTYD-NIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNNRVSSCQ 290
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 337
LE Y ++I+ EG++S AP RI+SFDIECAGR G FPEP +DPVIQ+AN+V++ G
Sbjct: 291 LEVSINYRNLIAHPAEGDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAG 350
Query: 338 EKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY 397
K+PFIRNV TL +C+PI G + S TE ++L WR+FI +VDPDV+IGYN FD+PY
Sbjct: 351 AKKPFIRNVFTLNTCSPITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPY 410
Query: 398 LIEK 401
L+ +
Sbjct: 411 LLNR 414
>gi|323355835|gb|EGA87648.1| Pol3p [Saccharomyces cerevisiae VL3]
Length = 1097
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/617 (55%), Positives = 449/617 (72%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIISDLQNG++ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 490 QKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + + VIPN++ S+ YEGATV+E G+Y+ PIATLD
Sbjct: 550 YLLARGQQIKVVSQLFRKCLEIDTVIPNMQSQASDD-QYEGATVIEPIRGYYDVPIATLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL +LNL E TP+G+ FV + ++GILP IL+
Sbjct: 609 FNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVITPNGDYFVTTKRRRGILPIILD 668
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 669 ELISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 728
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MI TK V++K+ GY+H+A V+YGDTDSVMV+FG ++ AM LG EAA Y
Sbjct: 729 AYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLKEAMDLGTEAAKY 788
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+PYLLI+KKRYAGL+WTNP+KFDK+D KG+ +VRRD+C LV
Sbjct: 789 VSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDKFDKLDQKGLASVRRDSCSLVSI 848
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL++R++ GA+ +V+ TI+D+L NR+D+S L+I+K L +Y H
Sbjct: 849 VMNKVLKKILIERNVDGALAFVRETINDILHNRVDISKLIISKTL---APNYTNPQPHAV 905
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++R+ PNVGDRV YVII K Y R+EDP++VLENNI +D+ YYL NQ+
Sbjct: 906 LAERMKRREGV-GPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQL 962
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALI--SN 935
P++ I PI+ K+ +SI I+T S G+M F K+ +C CK +
Sbjct: 963 QNPIISIVAPII--GDKQANGMFVVKSIKINTGSQKGGLMSFIKKVEACKSCKGPLRKGE 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G LCS+C R ELY K + V++LE + RLWTQCQ C G+LH +VLC++++C IFY R
Sbjct: 1021 GPLCSNCLARSGELYIKALYDVRDLEEKYSRLWTQCQRCAGNLHSEVLCSNKNCDIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRW 1012
K +K++ E QL +W
Sbjct: 1081 VKVKKELQEKVEQLSKW 1097
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 202/364 (55%), Gaps = 20/364 (5%)
Query: 46 DETLLPEDEESLILRDIEQ-RQDFASR----LAKWARPPLSSGYVSQCQSIMFQQLDIDY 100
D L+ ES +++ Q D A R L+ + R L + + I FQQ+D +
Sbjct: 63 DTDLMGTQLESTFEQELSQMEHDMADREEHDLSSFERKKLPTDFDPSLYDISFQQIDAEQ 122
Query: 101 VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFH 160
+ ++ ++ ++R FGVT EGHSV C V GF+ Y Y+ P +D +
Sbjct: 123 SVLXGIKD-----ENTSTVVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSSDANDQEQIN 177
Query: 161 QILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL 220
+ + N + IE+V K+SI Y PF KI V P MV R
Sbjct: 178 KFVH------YLNETFDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAF 231
Query: 221 DRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQ 277
+RG + + TY+ N+ + LR M+DC IVG +WI +P GKY + +S CQ
Sbjct: 232 ERGHLSFNSWFSNGTTTYD-NIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNNRVSSCQ 290
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 337
LE Y ++I+ EG++S AP RI+SFDIECAGR G FPEP +DPVIQ+AN+V++ G
Sbjct: 291 LEVSINYRNLIAHPAEGDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAG 350
Query: 338 EKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY 397
K+PFIRNV TL +C+PI G + S TE ++L WR+FI +VDPDV+IGYN FD+PY
Sbjct: 351 AKKPFIRNVFTLNTCSPITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPY 410
Query: 398 LIEK 401
L+ +
Sbjct: 411 LLNR 414
>gi|365766444|gb|EHN07940.1| Pol3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1097
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/617 (55%), Positives = 448/617 (72%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIISDLQNG++ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 490 QKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + + VIPN++ S+ YEGATV+E G+Y+ PIATLD
Sbjct: 550 YLLARGQQIKVVSQLFRKCLEIDTVIPNMQSQASDD-QYEGATVIEPIRGYYDVPIATLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL +LNL E TP+G+ FV + ++GILP IL+
Sbjct: 609 FNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVITPNGDYFVTTKRRRGILPIILD 668
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 669 ELISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 728
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MI TK V++K+ GY+H+A V+YGDTDSVMV+FG + AM LG EAA Y
Sbjct: 729 AYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLNEAMDLGTEAAKY 788
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+PYLLI+KKRYAGL+WTNP+KFDK+D KG+ +VRRD+C LV
Sbjct: 789 VSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDKFDKLDQKGLASVRRDSCSLVSI 848
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL++R++ GA+ +V+ TI+D+L NR+D+S L+I+K L +Y H
Sbjct: 849 VMNKVLKKILIERNVDGALAFVRETINDILHNRVDISKLIISKTL---APNYTNPQPHAV 905
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++R+ PNVGDRV YVII K Y R+EDP++VLENNI +D+ YYL NQ+
Sbjct: 906 LAERMKRREGV-GPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQL 962
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALI--SN 935
P++ I PI+ K+ +SI I+T S G+M F K+ +C CK +
Sbjct: 963 QNPIISIVAPII--GDKQANGMFVVKSIKINTGSQKGGLMSFIKKVEACKSCKGPLRKGE 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G LCS+C R ELY K + V++LE + RLWTQCQ C G+LH +VLC++++C IFY R
Sbjct: 1021 GPLCSNCLARSGELYIKALYDVRDLEEKYSRLWTQCQRCAGNLHSEVLCSNKNCDIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRW 1012
K +K++ E QL +W
Sbjct: 1081 VKVKKELQEKVEQLSKW 1097
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 202/364 (55%), Gaps = 20/364 (5%)
Query: 46 DETLLPEDEESLILRDIEQ-RQDFASR----LAKWARPPLSSGYVSQCQSIMFQQLDIDY 100
D L+ ES +++ Q D A + L+ + R L + + I FQQ+D +
Sbjct: 63 DTDLMGTQLESTFEQELSQMEHDMADQEEHDLSSFERKKLPTDFDPSLYDISFQQIDAEQ 122
Query: 101 VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFH 160
+ + ++ ++ ++R FGVT EGHSV C V GF+ Y Y+ P +D +
Sbjct: 123 SVLNGIKD-----ENTSTVVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSSDANDQEQIN 177
Query: 161 QILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL 220
+ + N + IE+V K+SI Y PF KI V P MV R
Sbjct: 178 KFVH------YLNETFDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAF 231
Query: 221 DRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQ 277
+RG + + TY+ N+ + LR M+DC IVG +WI +P GKY + +S CQ
Sbjct: 232 ERGHLSFNSWFSNGTTTYD-NIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNNRVSSCQ 290
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 337
LE Y ++I+ EG++S AP RI+SFDIECAGR G FPEP +DPVIQ+AN+V++ G
Sbjct: 291 LEVSINYRNLIAHPAEGDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAG 350
Query: 338 EKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY 397
K+PFIRNV TL +C+ I G + S TE ++L WR+FI +VDPDV+IGYN FD+PY
Sbjct: 351 AKKPFIRNVFTLNTCSXITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPY 410
Query: 398 LIEK 401
L+ +
Sbjct: 411 LLNR 414
>gi|207347015|gb|EDZ73334.1| YDL102Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1097
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/618 (55%), Positives = 451/618 (72%), Gaps = 15/618 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIISDLQNG++ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 490 QKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
+LL+RGQ IKV+SQL RK + + VIPN++ QA +Q YEGATV+E G+Y+ PIATL
Sbjct: 550 YLLARGQQIKVVSQLFRKCLEIDTVIPNMQSQASGDQ--YEGATVIEPIRGYYDVPIATL 607
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEIL 577
DF SLYPSIMMA+NLCY+TL +LNL E TP+G+ FV + ++GILP IL
Sbjct: 608 DFNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVITPNGDYFVTTKRRRGILPIIL 667
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
+EL++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSV
Sbjct: 668 DELISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSV 727
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
T+YGR MI TK V++K+ GY+H+A V+YGDTDSVMV+FG ++ AM LG EAA
Sbjct: 728 TAYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLKEAMDLGTEAAK 787
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
Y+S F PI LEFEK Y+PYLLI+KKRYAGL+WTNP+KFDK+D KG+ +VRRD+C LV
Sbjct: 788 YVSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDKFDKLDQKGLASVRRDSCSLVS 847
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ + L KIL++R++ GA+ +V+ TI+D+L NR+D+S L+I+K L +Y H
Sbjct: 848 IVMNKVLKKILIERNVDGALAFVRETINDILHNRVDISKLIISKTL---APNYTNPQPHA 904
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
LAERM++R+ PNVGDRV YVII K Y R+EDP++VLENNI +D+ YYL NQ
Sbjct: 905 VLAERMKRREGV-GPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQ 961
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALI--S 934
+ P++ I PI+ K+ +SI I+T S G+M F K+ +C CK +
Sbjct: 962 LQNPIISIVAPII--GDKQANGMFVVKSIKINTGSQKGGLMSFIKKVEACKSCKGPLRKG 1019
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
G LCS+C R ELY K + V++LE + RLWTQCQ C G+LH +VLC++++C IFY
Sbjct: 1020 EGPLCSNCLARSGELYIKALYDVRDLEEKYSRLWTQCQRCAGNLHSEVLCSNKNCDIFYM 1079
Query: 995 RKKAQKDMAEAKLQLDRW 1012
R K +K++ E QL +W
Sbjct: 1080 RVKVKKELQEKVEQLSKW 1097
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 202/364 (55%), Gaps = 20/364 (5%)
Query: 46 DETLLPEDEESLILRDIEQ-RQDFASR----LAKWARPPLSSGYVSQCQSIMFQQLDIDY 100
D L+ ES +++ Q D A R L+ + R L + + I FQQ+D +
Sbjct: 63 DTDLMGTQLESTFEQELSQMEHDMADREEHDLSSFERKKLPTDFDPSLYDISFQQIDAEQ 122
Query: 101 VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFH 160
+ ++ ++ ++R FGVT EGHSV C V GF+ Y Y+ P +D +
Sbjct: 123 SVLKGIKD-----ENTSTVVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSSDANDQEQIN 177
Query: 161 QILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL 220
+ + N + IE+V K+SI Y PF KI V P MV R
Sbjct: 178 KFVH------YLNETFDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAF 231
Query: 221 DRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQ 277
+RG + + TY+ N+ + LR M+DC IVG +WI +P GKY + +S CQ
Sbjct: 232 ERGHLSFNSWFSNGTTTYD-NIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNNRVSSCQ 290
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 337
LE Y ++I+ EG++S AP RI+SFDIECAGR G FPEP +DPVIQ+AN+V++ G
Sbjct: 291 LEVSINYRNLIAHPAEGDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAG 350
Query: 338 EKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY 397
K+PFIRNV TL +C+PI G + S TE ++L WR+FI +VDPDV+IGYN FD+PY
Sbjct: 351 AKKPFIRNVFTLNTCSPITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPY 410
Query: 398 LIEK 401
L+ +
Sbjct: 411 LLNR 414
>gi|1199547|emb|CAA64911.1| CDC2 [Saccharomyces cerevisiae]
gi|1431142|emb|CAA98669.1| CDC2 [Saccharomyces cerevisiae]
Length = 1097
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/617 (55%), Positives = 449/617 (72%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIISDLQNG++ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 490 QKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + + VIPN++ S+ YEGATV+E G+Y+ PIATLD
Sbjct: 550 YLLARGQQIKVVSQLFRKCLEIDTVIPNMQSQASDD-QYEGATVIEPIRGYYDVPIATLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL +LNL E TP+G+ FV + ++GILP IL+
Sbjct: 609 FNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVITPNGDYFVTTKRRRGILPIILD 668
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 669 ELISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 728
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MI TK V++K+ GY+H+A V+YGDTDSVMV+FG ++ AM LG EAA Y
Sbjct: 729 AYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLKEAMDLGTEAAKY 788
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+PYLLI+KKRYAGL+WTNP+KFDK+D KG+ +VRRD+C LV
Sbjct: 789 VSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDKFDKLDQKGLASVRRDSCSLVSI 848
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL++R++ GA+ +V+ TI+D+L NR+D+S L+I+K L +Y H
Sbjct: 849 VMNKVLKKILIERNVDGALAFVRETINDILHNRVDISKLIISKTL---APNYTNPQPHAV 905
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++R+ PNVGDRV YVII K Y R+EDP++VLENNI +D+ YYL NQ+
Sbjct: 906 LAERMKRREGV-GPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQL 962
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALI--SN 935
P++ I PI+ K+ +SI I+T S G+M F K+ +C CK +
Sbjct: 963 QNPIISIVAPII--GDKQANGMFVVKSIKINTGSQKGGLMSFIKKVEACKSCKGPLRKGE 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G LCS+C R ELY K + V++LE + RLWTQCQ C G+LH +VLC++++C IFY R
Sbjct: 1021 GPLCSNCLARSGELYIKALYDVRDLEEKYSRLWTQCQRCAGNLHSEVLCSNKNCDIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRW 1012
K +K++ E QL +W
Sbjct: 1081 VKVKKELQEKVEQLSKW 1097
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 203/364 (55%), Gaps = 20/364 (5%)
Query: 46 DETLLPEDEESLILRDIEQ-RQDFASR----LAKWARPPLSSGYVSQCQSIMFQQLDIDY 100
D L+ ES +D+ Q D A + L+ + R L + + I FQQ+D +
Sbjct: 63 DTDLMGTQLESTFEQDVSQMEHDMADQEEHDLSSFERKKLPTDFDPSLYDISFQQIDAEQ 122
Query: 101 VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFH 160
+ + ++ ++ ++R FGVT EGHSV C V GF+ Y Y+ P +D +
Sbjct: 123 SVLNGIKD-----ENTSTVVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSSDANDQEQIN 177
Query: 161 QILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL 220
+ + N + IE+V K+SI Y PF KI V P MV R
Sbjct: 178 KFVH------YLNETFDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAF 231
Query: 221 DRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQ 277
+RG + + TY+ N+ + LR M+DC IVG +WI +P GKY + +S CQ
Sbjct: 232 ERGHLSFNSWFSNGTTTYD-NIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNNRVSSCQ 290
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 337
LE Y ++I+ EG++S AP RI+SFDIECAGR G FPEP +DPVIQ+AN+V++ G
Sbjct: 291 LEVSINYRNLIAHPAEGDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAG 350
Query: 338 EKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY 397
K+PFIRNV TL +C+PI G + S TE ++L WR+FI +VDPDV+IGYN FD+PY
Sbjct: 351 AKKPFIRNVFTLNTCSPITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPY 410
Query: 398 LIEK 401
L+ +
Sbjct: 411 LLNR 414
>gi|259145143|emb|CAY78407.1| Pol3p [Saccharomyces cerevisiae EC1118]
Length = 1097
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/617 (55%), Positives = 448/617 (72%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIISDLQNG++ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 490 QKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + + VIPN++ S+ YEGATV+E G+Y+ PIATLD
Sbjct: 550 YLLARGQQIKVVSQLFRKCLEIDTVIPNMQSQASDD-QYEGATVIEPIRGYYDVPIATLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL +LNL E TP+G+ FV + ++GILP IL+
Sbjct: 609 FNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVITPNGDYFVTTKRRRGILPIILD 668
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 669 ELISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 728
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MI TK V++K+ GY+H+A V+YGDTDSVMV+FG + AM LG EAA Y
Sbjct: 729 AYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLNEAMDLGTEAAKY 788
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+PYLLI+KKRYAGL+WTNP+KFDK+D KG+ +VRRD+C LV
Sbjct: 789 VSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDKFDKLDQKGLASVRRDSCSLVSI 848
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL++R++ GA+ +V+ TI+D+L NR+D+S L+I+K L +Y H
Sbjct: 849 VMNKVLKKILIERNVDGALAFVRETINDILHNRVDISKLIISKTL---APNYTNPQPHAV 905
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++R+ PNVGDRV YVII K Y R+EDP++VLENNI +D+ YYL NQ+
Sbjct: 906 LAERMKRREGV-GPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQL 962
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALI--SN 935
P++ I PI+ K+ +SI I+T S G+M F K+ +C CK +
Sbjct: 963 QNPIISIVAPII--GDKQANGMFVVKSIKINTGSQKGGLMSFIKKVEACKSCKGPLRKGE 1020
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G LCS+C R ELY K + V++LE + RLWTQCQ C G+LH +VLC++++C IFY R
Sbjct: 1021 GPLCSNCLARSGELYIKALYDVRDLEEKYSRLWTQCQRCAGNLHSEVLCSNKNCDIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRW 1012
K +K++ E QL +W
Sbjct: 1081 VKVKKELQEKVEQLSKW 1097
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 203/364 (55%), Gaps = 20/364 (5%)
Query: 46 DETLLPEDEESLILRDIEQ-RQDFASR----LAKWARPPLSSGYVSQCQSIMFQQLDIDY 100
D L+ ES +++ Q D A + L+ + R L + + I FQQ+D +
Sbjct: 63 DTDLMGTQLESTFEQELSQMEHDMADQEEHDLSSFERKKLPTDFDPSLYDISFQQIDAEQ 122
Query: 101 VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFH 160
+ + ++ ++ ++R FGVT EGHSV C V GF+ Y Y+ P +D +
Sbjct: 123 SVLNGIKD-----ENTSTVVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSSDANDQEQIN 177
Query: 161 QILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL 220
+ + N + IE+V K+SI Y PF KI V P MV R
Sbjct: 178 KFVH------YLNETFDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAF 231
Query: 221 DRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQ 277
+RG + + TY+ N+ + LR M+DC IVG +WI +P GKY + +S CQ
Sbjct: 232 ERGHLSFNSWFSNGTTTYD-NIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNNRVSSCQ 290
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 337
LE Y ++I+ EG++S AP RI+SFDIECAGR G FPEP +DPVIQ+AN+V++ G
Sbjct: 291 LEVSINYRNLIAHPAEGDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAG 350
Query: 338 EKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY 397
K+PFIRNV TL +C+PI G + S TE ++L WR+FI +VDPDV+IGYN FD+PY
Sbjct: 351 AKKPFIRNVFTLNTCSPITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPY 410
Query: 398 LIEK 401
L+ +
Sbjct: 411 LLNR 414
>gi|444316824|ref|XP_004179069.1| hypothetical protein TBLA_0B07320 [Tetrapisispora blattae CBS 6284]
gi|387512109|emb|CCH59550.1| hypothetical protein TBLA_0B07320 [Tetrapisispora blattae CBS 6284]
Length = 1104
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/619 (55%), Positives = 448/619 (72%), Gaps = 17/619 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQ G++ETRRRLAVYCLKDAYLP RLLDKLM + NY EMARVTGVP S
Sbjct: 497 QKEDVHHSIITDLQLGDSETRRRLAVYCLKDAYLPLRLLDKLMGLVNYTEMARVTGVPFS 556
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + + +IPN+ GS++ YEGATV+E G+Y+ PIATLD
Sbjct: 557 YLLTRGQQIKVISQLFRKCLEIDTIIPNITSKGSDE-QYEGATVIEPIRGYYDIPIATLD 615
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL + LNL E TP+G+ FV + GILP IL
Sbjct: 616 FNSLYPSIMMAHNLCYTTLCNKQIVNSLNLKLDEDYIITPNGDYFVTEKRRHGILPIILN 675
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L++ARK+AK DLK+ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 676 DLISARKKAKNDLKKEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 735
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GR+MI TK V+DK++ GYEH+A V+YGDTDSVMV+FG ++ +M+LG EAA +
Sbjct: 736 SFGRKMILETKNAVQDKYSVKNGYEHDAVVVYGDTDSVMVKFGTSDLKESMRLGTEAAAW 795
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEKVY+PYLLI+KKRYAGLYWTNP+KFDK+D KG+ +VRRD+C LV
Sbjct: 796 VSTLFKHPINLEFEKVYFPYLLINKKRYAGLYWTNPDKFDKLDQKGLASVRRDSCPLVSI 855
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ L IL+DR++ GA++YVK I DLL NR D+S L+I+K L Y H
Sbjct: 856 VMNRVLKTILIDRNVDGALEYVKDVIDDLLHNRADISKLIISKTL---APQYTNPQPHAV 912
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LA R++KRD PNVGDRV YV+ + K Y R+EDP+Y LE+NI ID+ YYL NQ+
Sbjct: 913 LAARIKKRD-GNGPNVGDRVDYVV--TSGNDKLYNRAEDPLYALEHNIQIDSKYYLTNQL 969
Query: 879 SKPLLRIFEPIL--KNASKELLSGDHTRSISISTPS-NSGIMKFAKRQLSCIGCKALISN 935
PL I EPI+ + A+ L +SI I+T + +G+M F K+ +C CK +
Sbjct: 970 QNPLTSIIEPIIGERQANAMFL----VKSIKINTGNMKTGLMGFIKKVEACKNCKTSLKK 1025
Query: 936 GT--LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G LCS+C G+ +ELY K + V++L+ + R+WT+CQ C G+LH +VLC++++C IFY
Sbjct: 1026 GEGPLCSNCLGKSSELYVKALYDVRDLQEKYSRVWTECQRCAGTLHNEVLCSNKNCDIFY 1085
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
R K +K++ E +L +W
Sbjct: 1086 MRVKVKKELQEKMDELSKW 1104
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 205/360 (56%), Gaps = 27/360 (7%)
Query: 52 EDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP 111
EDE S + D S + R + + + I FQQ++ S + +LP
Sbjct: 79 EDELSQMEHDSADAISEHSLKQIYCRKQIPTDFDPMTSDISFQQIE-------SEQSILP 131
Query: 112 LSS--GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMG-----PDDISHFHQILE 164
S G+++++R FGVT G+S+ C V GF+ Y Y+ P G PD++++F
Sbjct: 132 HISDNGTSSVVRFFGVTENGNSILCNVTGFKHYLYVPIPIKNGQFAEDPDELTNF----- 186
Query: 165 GRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG- 223
+ + + ++P + HIE+V+K+SI Y F K+ + P + R +RG
Sbjct: 187 ----KNHVHQQIPNCISHIEIVKKQSIWGYSGDSKSKFWKVYLNEPNQINKLRTGFERGY 242
Query: 224 IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL--SYCQLEFD 281
+G TY+ N+ + LR MIDC IVG +WI +P KY + + S CQLE
Sbjct: 243 FSYNGWFSNGTTTYD-NIAYNLRLMIDCGIVGMSWITLPKTKYNLIQENMKVSTCQLEVT 301
Query: 282 CLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQP 341
Y D+I+ EGE+S AP RILSFDIECAGR G FPEP +D VIQ+AN+V++ G K+P
Sbjct: 302 INYKDLIAHPAEGEWSHTAPLRILSFDIECAGRVGIFPEPEYDSVIQIANIVSVVGAKKP 361
Query: 342 FIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
FIRNV TL +CAPI G V +TE ++L W+DFI EVDPDVMIGYNI FD PYLI++
Sbjct: 362 FIRNVFTLDTCAPITGSHVFDHKTEAEMLQHWKDFIIEVDPDVMIGYNIQNFDFPYLIDR 421
>gi|332687549|emb|CBZ41215.1| catalytic subunit of DNA polymerase delta [Saccharomyces uvarum]
gi|332687551|emb|CBZ41216.1| catalytic subunit of DNA polymerase delta [Saccharomyces uvarum]
gi|332687553|emb|CBZ41217.1| catalytic subunit of DNA polymerase delta [Saccharomyces bayanus]
Length = 1097
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/617 (55%), Positives = 446/617 (72%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIISDLQNG++ETRRRLAVYCLKDAYLP RLL+KLM + NY EMARVTGVP S
Sbjct: 490 QKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLLEKLMALVNYTEMARVTGVPFS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + + VIPN++ S+ YEGATV+E G+Y+ PIATLD
Sbjct: 550 YLLARGQQIKVVSQLFRKCLEIDTVIPNMQSQASDD-QYEGATVIEPIRGYYDVPIATLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL +LN E TP+G+ FV + ++GILP IL+
Sbjct: 609 FNSLYPSIMMAHNLCYTTLCNKGTVERLNFKLDEDYVITPNGDYFVTTKRRRGILPIILD 668
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 669 ELISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 728
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MI TK V++K+ GY+H+A V+YGDTDSVMV+FG ++ AM LG EAA Y
Sbjct: 729 AYGRTMILKTKNAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTADLKEAMDLGTEAAKY 788
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F +PI LEFEK Y+PYLLI+KKRYAGL+WTNP+ FDK+D KG+ +VRRD+C LV
Sbjct: 789 VSTLFKQPINLEFEKAYFPYLLINKKRYAGLFWTNPDHFDKLDQKGLASVRRDSCSLVSI 848
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL++R++ GA+ +V+ TI D+L NR+D+S L+I+K L +Y H
Sbjct: 849 VMNKVLKKILIERNVDGALTFVRETIDDILHNRVDISKLIISKTLAP---NYTNPQPHAV 905
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++RD PNVGDRV YVI K Y R+EDP++VLENNI +D+ YYL NQ+
Sbjct: 906 LAERMKRRDGV-GPNVGDRVDYVI--TGGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQL 962
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGT 937
P++ I PI+ K+ +SI I+T S G+M F K+ +C CK + G
Sbjct: 963 QNPIISIVAPII--GDKQANGMFVVKSIKINTGSQKGGLMSFIKKVEACKSCKGPLKKGE 1020
Query: 938 --LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LCS+C R ELY K + V++LE + RLWTQCQ C G+LH +VLC++++C IFY R
Sbjct: 1021 GPLCSNCLARSGELYIKALYDVRDLEQKYSRLWTQCQRCAGNLHSEVLCSNKNCDIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRW 1012
K +K++ E QL +W
Sbjct: 1081 VKVKKELQEKVEQLSKW 1097
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 190/333 (57%), Gaps = 15/333 (4%)
Query: 72 LAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHS 131
L+ + R L S + I FQQ+D + + + ++ ++ ++R FGVT EG+S
Sbjct: 94 LSSYERDKLPSDFDPDTYDISFQQIDAEQNVLNGMKD-----ENTSTVVRFFGVTSEGYS 148
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSI 191
V C V GF+ Y Y+ P DD ++ + N V IE+V K+SI
Sbjct: 149 VLCNVTGFKNYLYVPAPNSSDADDQEQINKFMH------YLNETFDGAVDSIEVVPKQSI 202
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMID 250
Y PF KI V P MV R +RG + + TY+ N+ + LR M+D
Sbjct: 203 WGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGTTTYD-NIAYTLRLMVD 261
Query: 251 CNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
C IVG +WI +P GKY K +S CQLE Y ++IS EG++S AP RI+SFD
Sbjct: 262 CGIVGMSWITLPKGKYSMIKPESRVSSCQLEVSINYRNLISHPAEGDWSHTAPLRIMSFD 321
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGR G FPEP +DPVIQ+AN+V++ G K+PFIRNV TL +C+PI G + S TE +
Sbjct: 322 IECAGRIGVFPEPEYDPVIQIANVVSIAGAKKPFIRNVFTLNTCSPITGSMIFSHATEEE 381
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L WRDFI + DPDV+IGYN FD+PYL+ +
Sbjct: 382 MLSHWRDFIIKADPDVIIGYNTSNFDIPYLLNR 414
>gi|255716712|ref|XP_002554637.1| KLTH0F09966p [Lachancea thermotolerans]
gi|238936020|emb|CAR24200.1| KLTH0F09966p [Lachancea thermotolerans CBS 6340]
Length = 1095
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/617 (56%), Positives = 446/617 (72%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIIS LQNG++ETRRRLAVYCLKDA+LP RL++KLM + NY EMARVTGVP S
Sbjct: 488 QKEDVHYSIISSLQNGDSETRRRLAVYCLKDAFLPLRLMEKLMALVNYTEMARVTGVPFS 547
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK Q + VIPN++ GS++ YEGATV+E G+Y+ PIATLD
Sbjct: 548 YLLSRGQQIKVVSQLFRKCLQIDTVIPNMQSQGSDE-QYEGATVIEPIRGYYDLPIATLD 606
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL + L L E TP+G+ FV S ++ GILPEIL
Sbjct: 607 FNSLYPSIMMAHNLCYTTLASKTTVETLKLKKDEEYIITPNGDYFVTSKVRSGILPEILY 666
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL+ ARKRAK DLK KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 667 ELINARKRAKNDLKAEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 726
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GR MIE TK+ VE+K++ G++H+A V+YGDTDSVMV+FG + AM+LG EAA Y
Sbjct: 727 SFGRTMIEKTKEAVEEKYSLKNGFKHDAVVVYGDTDSVMVKFGTHDLAEAMELGTEAAAY 786
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+PYLLI+KKRYAGLYWTNP K+DK+D KG+ +VRRD+C LV
Sbjct: 787 VSSLFKNPINLEFEKAYFPYLLINKKRYAGLYWTNPNKYDKLDQKGLASVRRDSCPLVSI 846
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL+DRD+ GA++++K I ++L NR D+S L+I+K L +Y H
Sbjct: 847 VMNKVLKKILIDRDVDGALKFIKEIIEEILHNRADISKLIISKTL---APNYTNPQPHAV 903
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L ERM+KRD T PNVGDRV YV+I K Y R+EDP+YVLE+NI ID+ YYL NQ+
Sbjct: 904 LTERMKKRD-GTGPNVGDRVDYVVI--GGNDKLYNRAEDPLYVLEHNIQIDSKYYLTNQL 960
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISIST-PSNSGIMKFAKRQLSCIGCKALISNGT 937
P++ I K+ S +SI IST + G+M F K+ +C GCK + G
Sbjct: 961 QNPIISIIA--PIIGEKQANSMFVVKSIKISTGNAKGGLMGFIKKVQTCKGCKGPLKKGE 1018
Query: 938 --LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LC +C R ELY + + V++LE F RLWTQCQ C GSLH +VLC++++C IFY R
Sbjct: 1019 GPLCKNCSSRSGELYVRALYDVRDLEEKFARLWTQCQRCSGSLHNEVLCSNKNCDIFYMR 1078
Query: 996 KKAQKDMAEAKLQLDRW 1012
KA+K++ E +L +W
Sbjct: 1079 VKAKKELQEKVEELGKW 1095
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 200/363 (55%), Gaps = 25/363 (6%)
Query: 47 ETLLP---EDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIG 103
+TL P E++ S + D Q+ W+R L S + SQ SI FQQLD
Sbjct: 67 QTLTPTQFEEQLSSMDHDTVNAQEHGQE-KTWSRESLPSDFSSQTHSISFQQLD------ 119
Query: 104 DSNRELLP--LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQ 161
+ + +P + ++A++R FGVT +GHSV C V GF Y Y+ P G DI F +
Sbjct: 120 -AEQSFIPGYVDQNTSAVVRFFGVTDQGHSVLCSVTGFRHYLYVPAPAGFTQQDIHGFLE 178
Query: 162 ILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD 221
L NS V IE+ ++SI Y PFLKI P + R +
Sbjct: 179 YL---------NSSYDNTVDEIEITARQSIWGYSGTAKLPFLKIYTNNPNAINKLRTGFE 229
Query: 222 RG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA--KTLSYCQL 278
RG I + T N+ + LR MIDC I G +WI +P GKY T + +S CQL
Sbjct: 230 RGHINYNDSWFSGGTTSYDNIAYPLRLMIDCGITGMSWITLPEGKYSMTPPNQKVSTCQL 289
Query: 279 EFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGE 338
E + D+I+R EGE+S AP RILSFDIEC+GR G FPEP DPVIQ+AN+V++ G
Sbjct: 290 EVRINFKDLIARPAEGEWSHSAPLRILSFDIECSGRVGVFPEPDVDPVIQIANVVSVAGS 349
Query: 339 KQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
+ FIRNV T+ SC+PI G + +TE ++L WR F+ E DPDV+IGYN FDLPYL
Sbjct: 350 SKSFIRNVFTVNSCSPITGSQIFEHKTENEMLKHWRQFVVETDPDVIIGYNTANFDLPYL 409
Query: 399 IEK 401
I++
Sbjct: 410 IDR 412
>gi|440293443|gb|ELP86560.1| DNA polymerase delta catalytic subunit, putative [Entamoeba invadens
IP1]
Length = 1078
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/649 (51%), Positives = 462/649 (71%), Gaps = 36/649 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+S I+DL NG+ + R R+AVYCLKD YLP RL+ KLM + N VEM RVTG+P+S
Sbjct: 432 QKEDVHYSDIADLHNGSPDDRNRIAVYCLKDTYLPIRLIKKLMSLVNGVEMCRVTGIPLS 491
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ +KV++QL R A K+ +IP ++ E Y GATV+ GFY PI+ LD
Sbjct: 492 YLLPRGQQVKVITQLYRHANDKHFLIPFYQRPSGEGDKYVGATVINPIKGFYRDPISVLD 551
Query: 520 FASLYPSIMMAYNLCYSTLV----TPEDARKL----------------NLPPECVNK--- 556
F+SLYPSIM+++NLCYSTL+ T D + + + +C+ K
Sbjct: 552 FSSLYPSIMISHNLCYSTLIEGVKTRVDVKNIEDLKTSGEQSDKNAYDQIVKKCLEKHLS 611
Query: 557 ------TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
+P+G+ FV+SN QKGILPEILE LLAARK+AK D+ KD + VL+GRQLAL
Sbjct: 612 LDDVELSPNGDLFVRSNKQKGILPEILENLLAARKQAKKDMAAEKDEFKIKVLNGRQLAL 671
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
KISANSVYGFTGA VG+LPC++I+SSVTSYGR MIE TK VE ++ G+ ++A+V+Y
Sbjct: 672 KISANSVYGFTGAQVGKLPCMQIASSVTSYGRTMIELTKNTVETHYSIKNGFAYDAKVVY 731
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVMV+FG ++ A+++G+EAA+Y++ F KPI LEFEKV++PYLLISKKRYAG++
Sbjct: 732 GDTDSVMVKFGTSDLKEAIRVGKEAAEYVTSKFPKPINLEFEKVFWPYLLISKKRYAGVF 791
Query: 731 WTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDR---DIPGAVQYVKSTISDL 787
W N EK+D +DTKGIETVRRDNC+LVK ++ CL IL+D+ +I AVQ+VK TI +L
Sbjct: 792 WCNAEKYDHLDTKGIETVRRDNCMLVKYVIERCLDLILLDKEKDNITRAVQFVKDTIREL 851
Query: 788 LMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAK 847
L N++DLS+L+I+K L+K + Y K AHVELA RMR+RD + N+GDR+PYVI+K+ K
Sbjct: 852 LQNKLDLSMLIISKTLSK--ESYAAKQAHVELANRMRERDKSVLINLGDRIPYVIVKSTK 909
Query: 848 GAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSIS 907
A+AYE++EDP+YVL+ +IPID YY+ENQ+ KPL RIF PIL + EL G+HTR +
Sbjct: 910 EARAYEKAEDPMYVLQKDIPIDFEYYIENQMRKPLTRIFRPILGDKVNELFEGEHTRFVV 969
Query: 908 ISTP-SNSGIMKFAKRQLSCIGCKALI-SNGTLCSHCKGREAELYCKTVSQVQELEVLFG 965
+TP S + KF +Q C+ C+A++ +G LC +CK + E+ K + V+E E+ +
Sbjct: 970 QTTPVEASPLGKFIVKQKRCVECRAVVKGSGVLCENCKQKTGEILVKKMKDVRESELEYN 1029
Query: 966 RLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
+ TQCQ+C S H+D++C +RDCPIFY R K +K + + + ++ +++
Sbjct: 1030 AIMTQCQDCMISHHRDIICGNRDCPIFYMRTKVEKAIKQKRAMIEDFDW 1078
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 180/332 (54%), Gaps = 12/332 (3%)
Query: 81 SSGYVSQCQSIMFQQLDIDYV---IGDSNR-ELLPLSSG-SAAIIRIFGVTREGHSVCCK 135
S Y SQ SI F Q DI+YV + S R P S G ++ ++G T G SV +
Sbjct: 29 SKIYNSQTDSIEFLQFDIEYVTRLVEKSERVRPDPQSDGFEEPVLYMYGCTSSGDSVLAR 88
Query: 136 VHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQFVRHIEMV-QKRSIMY 193
V GF+PYFYIS +++ + + + N+ Q+V +E V Q SIM
Sbjct: 89 VTGFKPYFYISVDHLYTESELNDLKVSMNKALHVDVQGNTDDDQYVLSVEGVTQYHSIMN 148
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNI 253
Y K F+KI + +P V R +L+ ++ + F T+E+++LF LR+MID I
Sbjct: 149 YTAYKDDFFVKITLRIPKYVPMLRHLLNDTTRVSN---RQFQTFEADILFVLRYMIDAGI 205
Query: 254 VGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC 311
VG +W++ P +Y + +S CQLE Y D+++ GE+++MAP RI SFDIEC
Sbjct: 206 VGCSWVKAPPKRYVIIPDSNRISRCQLEISLDYRDLVNLGFTGEYTRMAPLRICSFDIEC 265
Query: 312 AGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLL 371
KG FP P D VIQ+AN V G ++ +NV LK C PI G + F+TE ++L
Sbjct: 266 VSAKGTFPVPEKDSVIQIANYVVELGSEKVINKNVFVLKGCTPIPGATIFGFDTEEELLK 325
Query: 372 AWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
W DF+ ++D D+ GYNI FD YLI + +
Sbjct: 326 GWSDFVNDIDVDIFTGYNIMNFDFNYLITRAN 357
>gi|367016721|ref|XP_003682859.1| hypothetical protein TDEL_0G02810 [Torulaspora delbrueckii]
gi|359750522|emb|CCE93648.1| hypothetical protein TDEL_0G02810 [Torulaspora delbrueckii]
Length = 1094
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/617 (56%), Positives = 448/617 (72%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SII+ LQNG++ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 487 QKEDVHYSIITSLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFS 546
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK + VIPN++ GS++ YEGATV+E G+Y+ PIATLD
Sbjct: 547 YLLSRGQQIKVVSQLFRKCMEIETVIPNMQSQGSDE-QYEGATVIEPIRGYYDIPIATLD 605
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL ++ L E TP+G+ FV S L++GILP IL+
Sbjct: 606 FNSLYPSIMMAHNLCYTTLCNKATVDRMKLKQEEDYIITPNGDYFVTSKLRRGILPIILD 665
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DLK KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 666 ELISARKRAKKDLKNEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 725
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GR+MI TKK VE+K+ G++H+A V+YGDTDSVMV+FG ++ AM LG EAA Y
Sbjct: 726 SFGREMIMLTKKSVEEKYCVKNGFKHDAVVVYGDTDSVMVKFGTNDLKEAMDLGAEAAAY 785
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+P+LLI+KKRYAGL+WT+PEK+DK+D KG+ +VRRD+C LV
Sbjct: 786 VSTLFKHPINLEFEKAYFPFLLINKKRYAGLFWTSPEKYDKLDQKGLASVRRDSCPLVSI 845
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L +IL+ RD+ GA+ +VK TI D+L NR D+S L+I+K L +Y H
Sbjct: 846 VMNKVLKRILIQRDVDGALAFVKKTIDDILHNRADISKLIISKTLAP---NYTNPQPHAV 902
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L ERM+KRD PNVGDRV YVI+ K Y R+EDP+YVLE+NI ID+ YYL NQ+
Sbjct: 903 LTERMKKRD-GVGPNVGDRVDYVIM--GGNDKLYNRAEDPLYVLEHNIQIDSRYYLTNQL 959
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPS-NSGIMKFAKRQLSCIGCKALISNGT 937
PL+ I PI+ K+ + +SI I+T G+M F K+ SC C++ + +G
Sbjct: 960 QNPLISIIAPII--GEKQANAMFVVKSIKINTGEMKGGLMGFIKKVDSCKSCRSPLRSGE 1017
Query: 938 --LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LCS C R ELY K + V++LE F RLWTQCQ C G+LH +VLC++++C IFY R
Sbjct: 1018 GPLCSKCSVRSGELYIKALYNVRDLEEKFARLWTQCQRCAGTLHNEVLCSNKNCDIFYMR 1077
Query: 996 KKAQKDMAEAKLQLDRW 1012
K +K++ E+ QL +W
Sbjct: 1078 VKMKKELQESVDQLSKW 1094
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/336 (41%), Positives = 190/336 (56%), Gaps = 27/336 (8%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
+AR PL + S+ I FQQLD + ++ ++ I+R FGVT +GHS+ C
Sbjct: 94 YAREPLPEDFSSKAYDISFQQLDAEQSTLTGFKD-----ENTSTIVRFFGVTNDGHSILC 148
Query: 135 KVHGFEPYFYISCP---QGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSI 191
V GF+ Y Y+ P + + P + F + L RE N+ V IE+V K+SI
Sbjct: 149 NVTGFKHYLYVPAPNAGEALDPHQLDDFVKYL----RENYDNA-----VDKIELVPKQSI 199
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM----TYESNVLFALRF 247
Y PF KI V P V R ++G L KS+ T N+ + LR
Sbjct: 200 WGYSGDSKLPFYKIYVTHPNFVNKLRTAFEKG----HLSYKSWFGTGTTTYDNIAYTLRL 255
Query: 248 MIDCNIVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRIL 305
MIDC IVG +WI +P KY+ + +S CQ+E Y D+++ EGE+S P RIL
Sbjct: 256 MIDCGIVGMSWITLPKNKYQLIPENERVSSCQIEVRINYRDLVAHPAEGEWSHSGPLRIL 315
Query: 306 SFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFET 365
SFDIECAGR G FPEP HDPVIQ+AN++++ G K+PF+RNV T+ SCA I G V ++
Sbjct: 316 SFDIECAGRVGVFPEPQHDPVIQIANVMSIAGAKKPFVRNVFTVGSCAAITGSQVFPHDS 375
Query: 366 ERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L WRDF+ DPDV+IGYN FD PYLI++
Sbjct: 376 EEDMLKHWRDFVVAADPDVIIGYNTSNFDFPYLIDR 411
>gi|302308438|ref|NP_985361.2| AFL189Wp [Ashbya gossypii ATCC 10895]
gi|299790630|gb|AAS53185.2| AFL189Wp [Ashbya gossypii ATCC 10895]
gi|374108589|gb|AEY97495.1| FAFL189Wp [Ashbya gossypii FDAG1]
Length = 1092
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/619 (55%), Positives = 448/619 (72%), Gaps = 17/619 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+ L G++ETRRRLAVYCLKDAYLP RLL+KLM + NY EMARVTGVP
Sbjct: 485 QKEDVHHSIIASLHRGDSETRRRLAVYCLKDAYLPLRLLEKLMALVNYTEMARVTGVPFP 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L++RGQ IKV+SQL RK Q + +IPN+ S+ Y+GATV+E G+Y+ PIATLD
Sbjct: 545 YLITRGQQIKVISQLYRKCLQIDTIIPNMHGNHSDD-QYQGATVIEPIRGYYDIPIATLD 603
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL ++L L E TP+G+ FV S ++GILP ILE
Sbjct: 604 FNSLYPSIMMAHNLCYTTLCNKATVQRLQLKENEDYIITPNGDYFVTSKKRRGILPIILE 663
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL+AAR+RAK +LK+ DP +K VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 664 ELIAARQRAKGELKKETDPFKKDVLNGRQLALKISANSVYGFTGATVGKLPCLSISSSVT 723
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MIE TK+ VE+K+T GY+H+A V+YGDTDSVM++FG ++ M+LG EAA Y
Sbjct: 724 AYGRTMIETTKRAVEEKYTIKNGYKHDAIVVYGDTDSVMIKFGTNELKQTMELGAEAAAY 783
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEKVY+PYLLI+KKRYAGLYWT PEK+DK+D KG+ +VRRD+C LV
Sbjct: 784 VSSLFKHPINLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKLDQKGLASVRRDSCPLVSI 843
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL++R++PGA+++V++TI DLL N+ D+S L+I+K L +Y H
Sbjct: 844 VMNKILRMILIERNVPGALKFVENTIEDLLQNKADISKLIISKTL---APNYTNAQPHAI 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRD PNVGDRV YVII K Y R+E+P+YVLE NI +D+ YYL Q+
Sbjct: 901 LAERMKKRD-GVGPNVGDRVDYVII--GGNDKLYNRAENPLYVLEQNIQLDSKYYLTTQL 957
Query: 879 SKPLLRIFEPIL--KNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALI-- 933
P++ I PI+ K A+ + +SI I+T + G+M F K+ +C GC+ +
Sbjct: 958 QNPVVSIIAPIIGEKQANAMFI----VKSIKIATSNQKGGLMGFIKKVQTCKGCRGPLKK 1013
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
+ G LC CK R ELY K VS V+ELE F RLWTQCQ C GSLH +VLC++++C IFY
Sbjct: 1014 NEGPLCYSCKERSGELYLKAVSDVRELEEKFSRLWTQCQRCSGSLHNEVLCSNQNCDIFY 1073
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
R KA+K++ E L +W
Sbjct: 1074 MRVKARKELQEKVEDLSKW 1092
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 194/337 (57%), Gaps = 30/337 (8%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP--LSSGSAAIIRIFGVTREGHSV 132
W+R L + + + I FQQLD + + +LP + G++A++R FGVT +GHSV
Sbjct: 93 WSRDKLPADFAAATHDITFQQLD-------AEQAVLPGYIDGGTSAVVRFFGVTEQGHSV 145
Query: 133 CCKVHGFEPYFYISCPQGMG-----PDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQ 187
C V GF+ Y Y+ P P + + + + +G V +E+ Q
Sbjct: 146 LCSVTGFKHYMYVPAPANFDARTDVPVLVDYLNDMFDG-------------VVDSVEVCQ 192
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALR 246
K+SI Y + FLK++VA P + R ++G I + + T N+ + LR
Sbjct: 193 KQSIWGYSGDQKLQFLKVLVADPYGLNKIRTAFEKGYITPNDTWFQGGTTTYDNIAYTLR 252
Query: 247 FMIDCNIVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
MIDC IVG +WI +P GKY K +S CQLE Y D+ISR + ++S AP RI
Sbjct: 253 LMIDCGIVGMSWITLPKGKYAMIPKNKKISTCQLEVSINYKDLISRPADSDWSHSAPLRI 312
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGR G FPEP DPVIQ+AN+V++ GE +PFIRNV T+ +CAPI G + E
Sbjct: 313 LSFDIECAGRVGVFPEPEVDPVIQIANVVSIAGESKPFIRNVFTVDTCAPITGSQIFEHE 372
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
TE +L WRDF+ EVDPDV+IGYN FDLPYLI +
Sbjct: 373 TEEAMLKHWRDFLVEVDPDVIIGYNTTNFDLPYLINR 409
>gi|308504541|ref|XP_003114454.1| hypothetical protein CRE_27041 [Caenorhabditis remanei]
gi|308261839|gb|EFP05792.1| hypothetical protein CRE_27041 [Caenorhabditis remanei]
Length = 1080
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/622 (54%), Positives = 447/622 (71%), Gaps = 15/622 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H+II DLQ G+ +TRRRLA YCLKDAYLP RLLDKLM I NY+EMARVTG +
Sbjct: 455 QKEDVEHNIIPDLQRGDEQTRRRLAQYCLKDAYLPLRLLDKLMSIINYIEMARVTGFIMP 514
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
L + +++LS +LR+ KQ N +P ++ + YEGATV++ GFY +PIATLD
Sbjct: 515 MNLYKSW-LQILSMMLRRCKQNNFFLPVIEVNSGDGEGYEGATVIDPIRGFYNEPIATLD 573
Query: 520 FASLYPSIMMAYNLCYSTLV-TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIM+A+NLCY+TL+ +P+ E +TPSG+ F + + G+LPEILE
Sbjct: 574 FASLYPSIMIAHNLCYTTLLKSPQGVEN-----EDYIRTPSGQYFATKSKRHGLLPEILE 628
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+LL ARKRAK +K KD ++ V +GRQLALKISANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 629 DLLVARKRAKNFMKNEKDEFKRMVYNGRQLALKISANSVYGFTGAVVGKLPCLEISQSVT 688
Query: 639 SYGRQMIEHTKKLVE---DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
++GR+MI+ TK VE K G +A+VIYGDTDSVMV+FGV V AM++G EA
Sbjct: 689 AFGRKMIDMTKSEVERIYKKGALEGKCPADAKVIYGDTDSVMVKFGVENVAQAMEIGLEA 748
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
A +S F PIKLEFEKVY+PYLLI+KKRYAGLY+T PE DKMD KG+ETVRRDNC L
Sbjct: 749 AKEVSKIFTPPIKLEFEKVYFPYLLINKKRYAGLYFTKPEVHDKMDCKGLETVRRDNCPL 808
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
V ++ CL K+L++RD A+ + K TISDLL N++D+SLL+I+K LTK+GD Y+ K A
Sbjct: 809 VAKVLGVCLEKLLIERDQQSALDFAKRTISDLLCNKIDISLLIISKELTKSGDKYQAKQA 868
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
HVELA RM+KRDA +AP +GDRVPYV + AAK AYER+EDP +VL+NNIP+DT +YL
Sbjct: 869 HVELAARMKKRDAGSAPRLGDRVPYVFVAAAKNVPAYERAEDPTFVLQNNIPLDTKHYLT 928
Query: 876 NQISKPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI- 933
NQ++KPL RIFEPIL + A K L+ G+HTR ++ G+ F K+ +C+GCK+++
Sbjct: 929 NQLAKPLARIFEPILGDRAEKILVEGEHTRVRTVVQSKVGGLAAFTKKSATCLGCKSVLP 988
Query: 934 ---SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 990
S +C HC+ + E+Y + + ELE FGRLWT+CQ C ++ V C++RDCP
Sbjct: 989 KMESENAVCKHCEPKLPEIYASRLVTMHELENHFGRLWTECQNCAKTMQDKVNCSARDCP 1048
Query: 991 IFYRRKKAQKDMAEAKLQLDRW 1012
I+Y R+K + +++E + R+
Sbjct: 1049 IYYMREKVRNELSETNTIMQRF 1070
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 192/343 (55%), Gaps = 20/343 (5%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
WARP + + +SI Q L+++ D + ++ ++++GVT+ G+S+C
Sbjct: 47 WARPAVDKD-LGITKSIACQVLEVETYHEDGSATTYDRTN-----VKLYGVTKAGNSICV 100
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS---------KVPQFVRHIEM 185
V + P+FY PQG G + I + + A R KV + HIE+
Sbjct: 101 IVTDYFPHFYFQAPQGFGVEHIQTAQTAICNMVASAKRRGGSGQNQLPGKVVDNLVHIEL 160
Query: 186 VQKRSIMYYQQQKSQ-PFLKIVVALPTMVASCRGILDRGIQLDGLG-MKSFMTYESNVLF 243
V+ ++ Y++ ++ PF+K+ + + R L GI L G G + YESN+
Sbjct: 161 VRGENLYYFRGADTKVPFVKVTGSTEAL-HKARMELRNGINLMGKGPVNVGNLYESNIND 219
Query: 244 ALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAP 301
++FM NIVG WIE+P GK + ++ S CQ+E ++I EGE++ +AP
Sbjct: 220 IVKFMAKTNIVGCGWIELPAGKCQILSNSEKSSRCQIEVSVNVKNLIVHESEGEWADIAP 279
Query: 302 FRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVM 361
R LS DIEC GR+G FPE DP+IQ+ANLV ++GE +PF+RN L +CAP+VG +++
Sbjct: 280 IRTLSLDIECIGRRGVFPEAIKDPIIQIANLVKIEGETEPFVRNCFVLGTCAPVVGSNII 339
Query: 362 SFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
E+ +L W +F+REVDPD++ GYNI FDLPY++++ V
Sbjct: 340 QCVNEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKV 382
>gi|401626408|gb|EJS44355.1| cdc2p [Saccharomyces arboricola H-6]
Length = 1097
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/617 (55%), Positives = 447/617 (72%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIISDLQNG++ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 490 QKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + + VIPN++ S+ YEGATV+E G+Y+ PIATLD
Sbjct: 550 YLLARGQQIKVVSQLFRKCLEIDTVIPNMQSQASDD-QYEGATVIEPIRGYYDVPIATLD 608
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL +L+ E TP+G+ FV + ++GILP IL+
Sbjct: 609 FNSLYPSIMMAHNLCYTTLCNKGTVERLDFKLDEDYVITPNGDFFVTAKRRRGILPIILD 668
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 669 ELISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 728
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MI TK V++K+ GY H+A V+YGDTDSVMV+FG ++ AM LG EAA Y
Sbjct: 729 AYGRTMILKTKNAVQEKYCIKNGYTHDAVVVYGDTDSVMVKFGTTDLKEAMDLGTEAAKY 788
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+PYLLI+KKRYAGL+WT+PEKFDK+D KG+ +VRRD+C LV
Sbjct: 789 VSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTSPEKFDKLDQKGLASVRRDSCSLVSI 848
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL++R++ GA+ +VK TI+D+L N++D+S L+I+K L +Y H
Sbjct: 849 VMNKVLKKILIERNVDGALAFVKETINDILHNKVDISKLIISKTL---APNYTNPQPHAV 905
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++R+ PNVGDRV YVII K Y R+EDP++VLENNI +D+ YYL NQ+
Sbjct: 906 LAERMKRREGV-GPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQL 962
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGT 937
P++ I PI+ K+ +SI I+T S G+M F K+ +C CK + G
Sbjct: 963 QNPIISIVAPII--GDKQANGMFVVKSIKINTGSQKGGLMSFIKKVEACKSCKGPLKKGE 1020
Query: 938 --LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LCS+C R ELY K + V++LE + RLWTQCQ C G+LH +VLC++++C IFY R
Sbjct: 1021 GPLCSNCLARSGELYIKALYDVRDLEEKYARLWTQCQRCAGNLHSEVLCSNKNCDIFYMR 1080
Query: 996 KKAQKDMAEAKLQLDRW 1012
K +K++ E QL +W
Sbjct: 1081 VKIKKELQEKVEQLSKW 1097
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 202/364 (55%), Gaps = 20/364 (5%)
Query: 46 DETLLPEDEESLILRDIEQ-RQDFASR----LAKWARPPLSSGYVSQCQSIMFQQLDIDY 100
D L+ ES +++ Q D A + L+ + R L S + I FQQ+D +
Sbjct: 63 DTDLMGTQLESTFEQELSQMEHDLADKEERDLSSFERNKLPSDFDPNTYDISFQQIDAEQ 122
Query: 101 VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFH 160
+ +S ++ ++ ++R FGVT EG+SV C V GF+ Y Y+ P DD +
Sbjct: 123 SVLNSMKD-----ENTSTVVRFFGVTSEGYSVLCNVTGFKNYLYVPAPNSSDADDQEQIN 177
Query: 161 QILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL 220
+ + N V IE+V K+SI Y PF KI V P MV R
Sbjct: 178 KFIH------YLNETFDHAVDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAF 231
Query: 221 DRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT--LSYCQ 277
+RG + + TY+ N+ + LR M+DC IVG +WI + GKY + +S CQ
Sbjct: 232 ERGHLSFNSWFSNGTTTYD-NIAYTLRLMVDCGIVGMSWITLTKGKYSMIEENNRVSSCQ 290
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 337
LE Y ++I+ EG++S AP RI+SFDIECAGR G FPEP +DPVIQ+AN+V++ G
Sbjct: 291 LEVSINYRNLIAHPAEGDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAG 350
Query: 338 EKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY 397
K+PFIRNV TL +C+PI G + S TE ++L WRDFI + DPDV+IGYN FD+PY
Sbjct: 351 AKKPFIRNVFTLNTCSPITGSMIFSHATEEEMLSKWRDFIIKADPDVIIGYNTTNFDIPY 410
Query: 398 LIEK 401
L+ +
Sbjct: 411 LLNR 414
>gi|403213728|emb|CCK68230.1| hypothetical protein KNAG_0A05660 [Kazachstania naganishii CBS 8797]
Length = 1095
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/618 (55%), Positives = 448/618 (72%), Gaps = 15/618 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DL G++ETRRRLAVYCLKDAYLP RLL+KLM + NY EMARVTGVP S
Sbjct: 488 QKEDVHHSIITDLFKGDSETRRRLAVYCLKDAYLPLRLLEKLMALVNYTEMARVTGVPFS 547
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
+LLSRGQ IKV+SQL RK + + VIPN++ QA EQ YEGATV+E G+Y+ PIATL
Sbjct: 548 YLLSRGQQIKVVSQLFRKCLEIDTVIPNMQSQASDEQ--YEGATVIEPIRGYYDVPIATL 605
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEIL 577
DF SLYPSIMMA+NLCY+TL ++NL E TP+G+ FV L++GILP IL
Sbjct: 606 DFNSLYPSIMMAHNLCYTTLCNKATVERMNLKKDEDYIITPNGDYFVTDKLRRGILPIIL 665
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
+EL++AR RAK DL++ KD ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSV
Sbjct: 666 DELISARSRAKKDLRDEKDSFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSV 725
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TS+GR MI TK V+ K++ GY+H+A V+YGDTDSVMV+FG ++ M LG EAA
Sbjct: 726 TSFGRDMIMTTKNAVQKKYSIENGYKHDAVVVYGDTDSVMVKFGSNDLKEVMDLGTEAAA 785
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
Y+S F PI LEFEK Y+PYLLI+KKRYAGL+WTNP+ +DK+D KG+ +VRRD+C LV
Sbjct: 786 YVSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDHYDKLDQKGLASVRRDSCSLVS 845
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ + L KIL++R++PGA+ +VK TI+D+L NR+D+S L+I+K L +Y H
Sbjct: 846 IVMNKVLKKILIERNVPGALDFVKQTINDILQNRVDISKLIISKTL---APNYTNPQPHA 902
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
L++RM+KRD PNVGDRV YVI K Y R+EDP+YVLE+N+ +D+ YYL NQ
Sbjct: 903 VLSDRMKKRD-GMGPNVGDRVDYVI--TGGNDKLYNRAEDPLYVLEHNLQVDSKYYLTNQ 959
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTP-SNSGIMKFAKRQLSCIGCKALISNG 936
+ P++ I PI+ KE + +SI I++ + G++ F K+ C GCK+ + G
Sbjct: 960 LQNPIISIVAPII--GEKEANNMFIVKSIKINSGLTKGGLLGFVKKVAVCKGCKSPLKKG 1017
Query: 937 --TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
TLCS+C R ELY K + V++LE F RLWT+CQ C G+LH +VLC++++C IFY
Sbjct: 1018 ETTLCSNCSSRSGELYLKALYDVRDLEEKFSRLWTECQRCAGNLHTEVLCSNKNCDIFYM 1077
Query: 995 RKKAQKDMAEAKLQLDRW 1012
R K +K++ E QL +W
Sbjct: 1078 RVKVKKELQEKVQQLSKW 1095
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/353 (39%), Positives = 197/353 (55%), Gaps = 18/353 (5%)
Query: 52 EDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP 111
E E SL+ + + Q+ + + R L + + I FQQ+D + R+
Sbjct: 75 ERELSLLEHEAAESQE---QNTHYGRKQLPADFNPDTHDISFQQIDAEQTTISGLRD--- 128
Query: 112 LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN 171
++ ++R FGVT EGHSV C V GF+ Y Y+ P D + + + + E
Sbjct: 129 --ENTSGVVRFFGVTSEGHSVLCNVTGFKHYLYVPAPNDTDSKDPNKLKEFV-NYLNETF 185
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLG 230
NS V IE+ K+SI Y PF K+ V P ++ R +RG + +
Sbjct: 186 DNS-----VDSIEITLKQSIWGYSGDAKIPFWKVYVTHPAVLNKIRAAFERGHLSFNSWF 240
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDII 288
TY+ N+ + LR M+DC+IVG +WI +P KY+ + +S QLE + D+I
Sbjct: 241 SNGTTTYD-NIAYPLRVMVDCSIVGMSWITLPKTKYKLIPENQKVSTAQLEVTINHHDLI 299
Query: 289 SRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMT 348
S EG++S AP RILSFDIECAGR G FPEP DPVIQ+AN+V+ G K+PFIRNV T
Sbjct: 300 SHPAEGKWSHTAPLRILSFDIECAGRVGIFPEPEEDPVIQIANVVSEAGAKKPFIRNVFT 359
Query: 349 LKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ SCAPI G + + +TE+ +L WRDFI EVDPDV+IGYN FD+PYLI +
Sbjct: 360 VHSCAPITGSQIFAHDTEQQMLSHWRDFIVEVDPDVIIGYNTTNFDIPYLINR 412
>gi|221053875|ref|XP_002261685.1| dna polymerase delta catalytic subunit [Plasmodium knowlesi strain H]
gi|193808145|emb|CAQ38848.1| dna polymerase delta catalytic subunit,putative [Plasmodium knowlesi
strain H]
Length = 1096
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/614 (54%), Positives = 450/614 (73%), Gaps = 9/614 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SI++DLQN + E+R+R+A YC+KD LP RL+DKL+FI+NYVEMARVTG P
Sbjct: 481 QKEDVHYSIMNDLQNESPESRKRIATYCIKDGILPLRLIDKLLFIYNYVEMARVTGTPFV 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV SQL RK K+ N VIP+ YEGATVLE G+Y +PI+TLD
Sbjct: 541 YLLTRGQQIKVTSQLYRKCKELNYVIPSTYIKSGSNEKYEGATVLEPIKGYYIEPISTLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVN--KTPSGETFVKSNLQKGILPEIL 577
FASLYPSIM+A+NLCYSTLV ++ L E + + S FVK +++KGILP I+
Sbjct: 601 FASLYPSIMIAHNLCYSTLV-KNNSEIEGLEQEDITSIQGKSNIKFVKKSVKKGILPMIV 659
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGA-TVGQLPCIEISSS 636
EEL+ ARK+ K +K K+ + K VL+GRQLALKISANSVYG+TGA + GQLPC+E++ S
Sbjct: 660 EELIDARKKVKLLIKNEKNKITKMVLNGRQLALKISANSVYGYTGAASGGQLPCLEVAVS 719
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+T+ GR MI+ TK+ VE + G+EHN V+YGDTDSVM++FG ++ AM LG++AA
Sbjct: 720 ITTLGRSMIDKTKESVEKYYNKSNGFEHNCTVVYGDTDSVMIKFGTSSIAEAMALGKDAA 779
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
IS F+ PIKLEFEKVY PYLL++KKRYAGL +T PEK DKMD KGIETVRRD C+L+
Sbjct: 780 QRISKEFLHPIKLEFEKVYCPYLLLNKKRYAGLLYTTPEKHDKMDCKGIETVRRDFCILI 839
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+ ++ L+K+L+++++ A++Y KS I DLL N +D+SLLV+TK L KT DYE + H
Sbjct: 840 QQMMETVLNKLLIEKNLDSAIEYTKSKIKDLLTNNIDMSLLVVTKSLGKT--DYETRLPH 897
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELA+++++RD+ATAPNVGDRV Y+IIK KG YER+EDP+YVL+NN+ ID ++YL+
Sbjct: 898 VELAKKLKQRDSATAPNVGDRVSYIIIKGVKGQAQYERAEDPLYVLDNNLAIDYNHYLD- 956
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG 936
I L RIFE I+ N S L G+HTR +I T S + + KF ++ + CIGC + I
Sbjct: 957 AIKNTLSRIFEVIMNN-SDSLFCGEHTRHKTILTSSQTALSKFLQKAVRCIGCNSSIKKP 1015
Query: 937 TLCSHCK-GREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LC+HCK +E +Y + ++ ++ + F +LWT+CQ CQG+LH +V+C +RDCPIFYRR
Sbjct: 1016 PLCNHCKSNKELSIYMQKMNNFKKKQNEFFQLWTECQRCQGNLHAEVICMNRDCPIFYRR 1075
Query: 996 KKAQKDMAEAKLQL 1009
K +KDMA + Q+
Sbjct: 1076 AKIKKDMANVQEQI 1089
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 187/372 (50%), Gaps = 39/372 (10%)
Query: 66 QDFASRLAKWARPPLSSGYVSQC---QSIMFQ-QLDIDYVIGDSNRELLPLSSG------ 115
+ F L + RP C QS +F Q+DI+Y + + + ++ ++ G
Sbjct: 37 EQFDQLLTTYERPSPYDANGQICISNQSDLFLFQIDIEYTVDNIFKNMVSMNDGTPNGSA 96
Query: 116 --------------------SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDD 155
S +I I+ VT +G+S VH F PYFY+ P +D
Sbjct: 97 LADIFSTYRSMLQNSEKNYISVPVIHIYTVTNDGYSALVSVHNFFPYFYVEMPSNFQKED 156
Query: 156 ISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVAS 215
+ ++ + N+ Q + +IE+V+ S+MYY+++ + FLKI V LP MV +
Sbjct: 157 LLKLECMMNDNLNMNNQYKMYEQKIMNIEIVKTESLMYYKREGKKNFLKITVLLPKMVPT 216
Query: 216 CRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTL 273
+ + + ++G + + YE+N+ F LR++ID I G +W+ + R K +
Sbjct: 217 LKKYFEGIVNVNGKNIGG-IVYEANLPFILRYIIDKKITGSSWLLCKKENFYIRPRHKKI 275
Query: 274 SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH-FPEPTHDPVIQVANL 332
S C E D + + E EF ++ RILSFDIEC G FPE +DP+IQ++++
Sbjct: 276 SNCSFEIDISFEHLEPMPLENEFQQIPKLRILSFDIECIKLDGKGFPEAKNDPIIQISSI 335
Query: 333 VTLQGEKQPF---IRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYN 389
+ QG+ P + + TLK CA I G +V+ F E+ +L AW +FI +DPD + GYN
Sbjct: 336 LYFQGD--PIGKCSKFIFTLKECASIPGSNVIWFHDEKTLLDAWNEFITRLDPDFLTGYN 393
Query: 390 ICKFDLPYLIEK 401
I FDLPY++ +
Sbjct: 394 IINFDLPYILNR 405
>gi|366990559|ref|XP_003675047.1| hypothetical protein NCAS_0B05920 [Naumovozyma castellii CBS 4309]
gi|342300911|emb|CCC68676.1| hypothetical protein NCAS_0B05920 [Naumovozyma castellii CBS 4309]
Length = 1099
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/618 (56%), Positives = 448/618 (72%), Gaps = 15/618 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SII+DLQNG++ETRRRLAVYCLKDAYLP RLL+KLM + NY EMARVTGVP S
Sbjct: 492 QKEDVHYSIITDLQNGDSETRRRLAVYCLKDAYLPLRLLEKLMGLVNYTEMARVTGVPFS 551
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
+LLSRGQ IKV+SQL RK Q + VIPN+ QA EQ YEGATV+E G+Y+ PIATL
Sbjct: 552 YLLSRGQQIKVVSQLFRKCIQIDTVIPNMSSQASDEQ--YEGATVIEPIRGYYDVPIATL 609
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEIL 577
DF SLYPSIMMA+NLCY+TL +L L E TP+G+ FV S +++GILP IL
Sbjct: 610 DFNSLYPSIMMAHNLCYTTLCNKATVERLKLTKDEDYVITPNGDYFVTSKIRRGILPIIL 669
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
+EL+ ARKRAK DLK KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSV
Sbjct: 670 DELINARKRAKKDLKNEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSV 729
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TS+GR+MI TK V+DK++ GYE++A V+YGDTDSVMV+FG ++ AM LG EAA
Sbjct: 730 TSFGREMIMLTKNAVQDKYSKANGYENDAIVVYGDTDSVMVKFGTNDLKEAMALGTEAAA 789
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
Y+S F PI LEFEK Y+PYLLI+KKRYAGLYWTNP+K+DK+D KG+ +VRRD+C LV
Sbjct: 790 YVSTLFKNPINLEFEKAYFPYLLINKKRYAGLYWTNPDKYDKLDQKGLASVRRDSCSLVS 849
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ + L KIL++R++ GA+++VK TI D+L NR+D+S L+I+K L +Y H
Sbjct: 850 IVMNKVLKKILIERNVNGALEFVKKTIDDILHNRVDISKLIISKTLAP---NYVNPQPHA 906
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
L+ERM+KRD PNVGDRV YVI K Y R+EDP+YVLE+NI ID+ YYL NQ
Sbjct: 907 VLSERMKKRD-GMGPNVGDRVDYVI--TGGNDKLYNRAEDPLYVLEHNIQIDSKYYLTNQ 963
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISIST-PSNSGIMKFAKRQLSCIGCKALISNG 936
+ P++ K+ S +SI IST + G+M F K+ SC GC+ + G
Sbjct: 964 LQNPIIS--IIAPIIGEKQANSMFVVKSIKISTGETKGGLMGFVKKVASCKGCRGPLKKG 1021
Query: 937 T--LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LC++C+ R ELY K + +++LE + RLWT+CQ C G+LH +VLC++++C IFY
Sbjct: 1022 EGPLCANCQSRSGELYIKALYDIRDLEEKYARLWTECQRCAGTLHNEVLCSNKNCDIFYM 1081
Query: 995 RKKAQKDMAEAKLQLDRW 1012
R K +K++ E Q+ +W
Sbjct: 1082 RVKVKKELQEKMEQMSKW 1099
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/332 (42%), Positives = 190/332 (57%), Gaps = 14/332 (4%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSV 132
+K+ R L + S I FQQ+D + I + + + ++ ++R FGVT EG+SV
Sbjct: 96 SKYGRIVLPGDFSSATHDISFQQIDAEQSILNGGFK----DNNTSTVVRFFGVTSEGYSV 151
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANR-NSKVPQFVRHIEMVQKRSI 191
C V GF+ Y Y+ P DD Q R R N N V IE+V+K+SI
Sbjct: 152 LCNVTGFKHYLYVPQPNS---DDAKDPQQ----RERFLNYLNEMFDNGVDSIEVVEKQSI 204
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y PF K++V P+++ R ++G + T N+ + LR M+DC
Sbjct: 205 WGYSGDGKLPFWKVLVTYPSLINKLRTGFEKGHYTYNSWFSNGTTTYDNIAYPLRLMVDC 264
Query: 252 NIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
IVG +WI +P GKY K LS CQLE Y D+++ EG++S MAP RILSFDI
Sbjct: 265 GIVGMSWITLPKGKYTLIPDNKKLSTCQLELTINYKDLVAHPAEGDWSHMAPLRILSFDI 324
Query: 310 ECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
ECAGR G FPEP DPVIQ+AN+V++ G K+PFIRNV T+ SC+PI G V + + E D+
Sbjct: 325 ECAGRIGVFPEPEEDPVIQIANVVSVAGAKKPFIRNVFTVNSCSPITGSQVFAHDKEEDM 384
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
L WR FI E DPDV+IGYN FDLPYLI +
Sbjct: 385 LRHWRQFILEADPDVIIGYNTTNFDLPYLINR 416
>gi|3480|emb|CAA33504.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 1093
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/616 (54%), Positives = 444/616 (72%), Gaps = 13/616 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIISDLQNG++ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 488 QKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFS 547
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + + VIPN++ S+ YEGATV+E G+Y+ PIATLD
Sbjct: 548 YLLARGQQIKVVSQLFRKCLEIDTVIPNMQSQASDD-QYEGATVIEPIRGYYDVPIATLD 606
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F SLYPSIMMA+NLCY+TL +LNL + G+ FV + ++GILP IL+E
Sbjct: 607 FNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVIHYGDYFVTTKRRRGILPIILDE 666
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
L++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT+
Sbjct: 667 LISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVTA 726
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MI TK V++K+ GY+H+A V+YGDTDSVMV+FG ++ AM LG EAA Y+
Sbjct: 727 YGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLKEAMDLGTEAAKYV 786
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PI LEFEK Y+PYLLI+KKRYAGL+WTNP+KFDK+D KG+ +VRRD+C LV +
Sbjct: 787 STLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDKFDKLDQKGLASVRRDSCSLVSIV 846
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ + L KIL++R++ GA+ + + TI+D+L NR+D+S L+I+K L +Y H L
Sbjct: 847 MNKVLKKILIERNVDGALAFDRETINDILHNRVDISKLIISKTL---APNYTNPQPHAVL 903
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERM++R+ PNVGDRV YVII K Y R+EDP++VLENNI +D+ YYL NQ+
Sbjct: 904 AERMKRREGV-GPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQLQ 960
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALI--SNG 936
P++ I PI + + +SI I+T S G+M F K+ +C CK + G
Sbjct: 961 NPIISIVAPIGDKQANGMFV---VKSIKINTGSQKGGLMSFIKKVEACKSCKGPLRKGEG 1017
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LCS+C R ELY K + V++LE + RLWTQCQ C G+LH +VLC++++C IFY R
Sbjct: 1018 PLCSNCLARSGELYIKALYDVRDLEEKYSRLWTQCQRCAGNLHSEVLCSNKNCDIFYMRV 1077
Query: 997 KAQKDMAEAKLQLDRW 1012
K +K++ E QL +W
Sbjct: 1078 KVKKELQEKVEQLSKW 1093
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 134/364 (36%), Positives = 195/364 (53%), Gaps = 22/364 (6%)
Query: 46 DETLLPEDEESLILRDIEQ-RQDFASR----LAKWARPPLSSGYVSQCQSIMFQQLDIDY 100
D L+ ES +D+ Q D A + L+ + R L + + I FQQ+D +
Sbjct: 63 DTDLMGTQLESTFEQDVSQMEHDMADQEEHDLSSFERKKLPTDFDPSLYDISFQQIDAEQ 122
Query: 101 VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFH 160
+ + ++ ++ ++R FGVT EGHSV C V GF+ Y Y+ P +D +
Sbjct: 123 SVLNGIKD-----ENTSTVVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSSDANDQEQIN 177
Query: 161 QILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL 220
+ + N + + IE+V K+SI Y PF KI V P MV R
Sbjct: 178 KFVH------YLNETFDRAIDSIEVVSKQSIWDYSGDTKLPFWKIYVTYPHMVNKLRTAF 231
Query: 221 DRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQ 277
+RG + + TY+ N+ + LR M+DC IVG +WI +P GKY + +S CQ
Sbjct: 232 ERGHLSFNSWFSNGTTTYD-NIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNNRVSSCQ 290
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 337
LE Y ++I+ EG++S AP RI+SFDIECAGR G FPEP +DPVIQ+AN+V L
Sbjct: 291 LEVSINYRNLIAHPAEGDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVYLAL 350
Query: 338 EKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY 397
F+ + +C+PI G + S TE ++L WR+FI +VDPDV+IGYN FD+PY
Sbjct: 351 RNHSFV--MCYSDTCSPITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPY 408
Query: 398 LIEK 401
L+ +
Sbjct: 409 LLNR 412
>gi|67900676|ref|XP_680594.1| hypothetical protein AN7325.2 [Aspergillus nidulans FGSC A4]
gi|40742186|gb|EAA61376.1| hypothetical protein AN7325.2 [Aspergillus nidulans FGSC A4]
gi|259483322|tpe|CBF78614.1| TPA: catalytic subunit of DNA polymerase delta (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 1044
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/615 (56%), Positives = 444/615 (72%), Gaps = 55/615 (8%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 480 QKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K LSQL RKA Q+ LVIPN+K +++ YEGATV+E +Y+ PIATLD
Sbjct: 540 FLLSRGQQVKFLSQLYRKALQQQLVIPNMK--STDEQDYEGATVIEPIRDYYDVPIATLD 597
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSI+ A+NLCY+TL+ + + + TP+G+ F ++KG+L +ILEE
Sbjct: 598 FASLYPSIIQAHNLCYTTLLNKNSVAGMKKDEDYI-VTPNGDMFCTPKVRKGLLSQILEE 656
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AK +L + DP +KAVL+GRQLALK+SANSVYG TGATVG+LPC+ I+SS TS
Sbjct: 657 LLSARKKAKKELAQETDPFKKAVLNGRQLALKVSANSVYGLTGATVGKLPCLAIASSTTS 716
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGRQMIE TK+ VE ++T GY H+A+VIYGDTDSVMV+FGV +E AMKLG+EA++Y+
Sbjct: 717 YGRQMIEKTKQEVEARYTIANGYSHDAKVIYGDTDSVMVKFGVTELEEAMKLGQEASEYV 776
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S FIKPIKLEFEKVY+PYLLI+KKRYAGLYWTNP+K+DKMDTKGIETVRRDNCLLV+N+
Sbjct: 777 SSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTNPKKYDKMDTKGIETVRRDNCLLVQNV 836
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ LHKIL+DRD+ A +YVK TISDLL N++D+S LVITK LTK D Y K AHVEL
Sbjct: 837 IETVLHKILIDRDVEAAQEYVKDTISDLLQNKIDMSKLVITKALTK--DSYTAKQAHVEL 894
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AERMRKRDA +AP +GDRV YVI+K A+E V ++ P + +
Sbjct: 895 AERMRKRDAGSAPTLGDRVAYVIVKGT----AHE-------VHRHSAPTMGGLMKFTKKT 943
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLC 939
+ L +P+ K++++G C C+
Sbjct: 944 QTCLGCKKPL---TGKDVMAG-----------------------AVCESCRP-------- 969
Query: 940 SHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQ 999
R ELY K+++++ +LEV FGRLWTQCQ CQGSLH +V+C+SRDCPIFY R KA+
Sbjct: 970 -----RLGELYTKSMNKMSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIFYMRMKAK 1024
Query: 1000 KDMAEAKLQLDRWNF 1014
KD+ +A+ +L R++F
Sbjct: 1025 KDVEDAQKELARFDF 1039
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 203/345 (58%), Gaps = 27/345 (7%)
Query: 65 RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFG 124
+++ + + +W RPPL + +I FQQ+D + + G AI R+FG
Sbjct: 79 KENNSEKDQQWERPPLGE-FDPTKDNICFQQIDAEE----------GTTMGKPAI-RLFG 126
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIE 184
VT G SV V GF+ Y YI+ P G +D + LE ++ + P ++ ++
Sbjct: 127 VTEAGQSVLLHVTGFQHYLYIAAPVGFTKEDCDPYRAFLESKI------GQFPPVIQSVQ 180
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD---RGIQLDGLGMKS---FMTYE 238
+ + +I +Q K +LKI V P ++ R L+ + + GL + +T++
Sbjct: 181 ITMRENIYGFQGNKKSYYLKITVTEPRHISKLRSALETKAQTVNYKGLWTNADGGILTFD 240
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA--KTLSYCQLEFDCLYSDIISRHPEGEF 296
N+ + LRFMID +I G +W+E P GKY A +S CQLE Y +IS P G++
Sbjct: 241 -NIQYLLRFMIDTDIQGMSWVEAPAGKYELIAPQDKVSNCQLEARIDYRSLISHAPVGDW 299
Query: 297 SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
+KMAP RILSFDIECAGRKG FPEP HDPVIQ+AN+VT GE +PFIRNV + +C+ IV
Sbjct: 300 AKMAPLRILSFDIECAGRKGIFPEPNHDPVIQIANVVTRYGESKPFIRNVFVMNTCSLIV 359
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++ F+ E +L+AWRDFI++VDPDV+IGYNI FD PYL+++
Sbjct: 360 NTQILEFQQEEKMLMAWRDFIQKVDPDVIIGYNIANFDFPYLLDR 404
>gi|156844887|ref|XP_001645504.1| hypothetical protein Kpol_1004p20 [Vanderwaltozyma polyspora DSM
70294]
gi|156116168|gb|EDO17646.1| hypothetical protein Kpol_1004p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 1096
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/619 (56%), Positives = 450/619 (72%), Gaps = 17/619 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG++ETRRRLAVYCLKDAYLP RLL+ LM + NY EM+RVTGVP S
Sbjct: 489 QKEDVHHSIITDLQNGDSETRRRLAVYCLKDAYLPLRLLENLMALVNYTEMSRVTGVPFS 548
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK + + VIPN+ G++Q YEGATV+E G+Y+ PIATLD
Sbjct: 549 YLLSRGQQIKVVSQLFRKCIEIDTVIPNMASQGTDQ-QYEGATVIEPIRGYYDIPIATLD 607
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL E ++LNL E TP+G+ FV + L+ GILP IL
Sbjct: 608 FNSLYPSIMMAHNLCYTTLCNKETVQRLNLKKDEDYIITPNGDYFVSTKLRHGILPIILR 667
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL+ ARKRAK DLK DP +K VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 668 ELIDARKRAKKDLKNETDPFKKNVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 727
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GR MI TK VE+K+ GY+H+A V+YGDTDSVMV+FG ++ +M+LG EAA +
Sbjct: 728 AFGRDMIMTTKNAVEEKYRISNGYKHDAVVVYGDTDSVMVKFGTSDLKESMELGTEAAAF 787
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+SG F PI LEFEK Y+PYLLI+KKRYAGLYWT EK+DK+D KG+ +VRRD+C LV
Sbjct: 788 VSGLFKDPINLEFEKAYFPYLLINKKRYAGLYWTRTEKYDKLDQKGLASVRRDSCPLVSI 847
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL+DRD+ A+ YVK I +LL N++D+S L+I+K L +Y H
Sbjct: 848 VMNKVLKKILIDRDVDNALAYVKQIIDNLLHNKVDISQLIISKTLAP---NYTNPQPHAI 904
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAER+RKR+ + PN GDRV YVI+ K Y R+EDP+YVLE+N+ +D+ YYL NQ+
Sbjct: 905 LAERIRKREGS-GPNTGDRVDYVIM--GGNDKLYNRAEDPLYVLEHNLQLDSKYYLTNQL 961
Query: 879 SKPLLRIFEPIL--KNASKELLSGDHTRSISISTPS-NSGIMKFAKRQLSCIGCKALISN 935
P++ I PI+ K A+ + +SI I+T S G+M F K+ SC GCK + +
Sbjct: 962 QNPIISIIAPIIGEKGANSMFV----VKSIKINTGSMKGGLMGFIKKVESCKGCKGPLKS 1017
Query: 936 GT--LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
G LC +CK R +ELY KT+ V+ELE F RLWTQCQ C GSLH +VLC++++C IFY
Sbjct: 1018 GEGPLCHNCKSRSSELYIKTLYDVRELEQKFARLWTQCQRCSGSLHNEVLCSNKNCDIFY 1077
Query: 994 RRKKAQKDMAEAKLQLDRW 1012
R K +K++ E QL +W
Sbjct: 1078 MRVKVKKELQEKVEQLSKW 1096
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 196/331 (59%), Gaps = 17/331 (5%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLS--SGSAAIIRIFGVTREGHSV 132
+ R PL + + I FQQLD + DS LLP S ++ ++R FGVT GHSV
Sbjct: 96 YPRKPLDPEFSPETHDISFQQLDCE----DS---LLPGSKDGSTSYVVRFFGVTDNGHSV 148
Query: 133 CCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIM 192
C V GF+ Y Y+ P M + S+ + L G ++ N ++ V IE+V+K+SI
Sbjct: 149 LCNVTGFKHYLYVPAP--MSAESPSN--EDLLGFVKHINE--QLDNCVDSIEIVEKQSIW 202
Query: 193 YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCN 252
Y PF K+ + P M+ R ++G + T N+ + LR MIDC
Sbjct: 203 GYSGDSKLPFWKVYLKTPNMINKVRTGFEKGHFSYKSWFSNGTTSYDNIAYTLRLMIDCG 262
Query: 253 IVGGNWIEVPVGKYRKTAKT--LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIE 310
IVG +WI +P KY+ + +S CQLE Y D+IS PE +S AP RILSFDIE
Sbjct: 263 IVGMSWITLPKQKYKMIPEKDKVSTCQLEVKINYKDLISHAPENNWSHSAPLRILSFDIE 322
Query: 311 CAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVL 370
CAGR G FPEP HD VIQ+AN+V++ G K+PFIRNV T+ +C+PI G + S ETE+++L
Sbjct: 323 CAGRVGVFPEPEHDSVIQIANVVSIAGAKKPFIRNVFTVDTCSPITGSHIFSHETEKEML 382
Query: 371 LAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
WR+FI +VDPD++IGYN FDLPYLI++
Sbjct: 383 SKWREFIVKVDPDLIIGYNSANFDLPYLIDR 413
>gi|50308039|ref|XP_454020.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643155|emb|CAG99107.1| KLLA0E01607p [Kluyveromyces lactis]
Length = 1101
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/621 (55%), Positives = 449/621 (72%), Gaps = 15/621 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+ LQNG++ETRRRLAVYCLKDAYLP RL++KLM + NY EM+RVTGVP
Sbjct: 488 QKEDVHHSIITTLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMSRVTGVPFM 547
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK Q VIPN+ GS++ YEGATV+E + G+Y+ PIATLD
Sbjct: 548 YLLARGQQIKVISQLFRKCLQIQTVIPNMSSQGSDE-QYEGATVIEPKRGYYDVPIATLD 606
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F+SLYPSIMMA+NLCY+TL ++LNL E TP+ + FV S +++G+LPEILE
Sbjct: 607 FSSLYPSIMMAHNLCYTTLCDRATVQRLNLKLDEDYIVTPNNDIFVTSKVRRGVLPEILE 666
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL+ ARK+AK DLK DP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 667 ELIGARKKAKFDLKNETDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 726
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GR MIE TK VE+K+ G H+A V+YGDTDSVMV+FG +E +MKLG EAA Y
Sbjct: 727 SFGRTMIETTKNAVENKYCIKNGASHDAVVVYGDTDSVMVKFGTTDLEESMKLGAEAAAY 786
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PIKLEFEKVY+PYLLI+KKRYAGLYWTNP+K+DK+D KG+ +VRRD+C LV
Sbjct: 787 VSSLFKDPIKLEFEKVYFPYLLINKKRYAGLYWTNPKKYDKLDQKGLASVRRDSCPLVSI 846
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL+ R++ GA+Q+++ TI D+L NR D+S L+I+K L +Y H
Sbjct: 847 VMNKVLKKILIGRNVDGAMQFIRETIDDILQNRCDISKLIISKTL---APNYTNPQPHAV 903
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRD PNVGDRV YVII G K + R+EDP+YVLE N+ +D+ YYL NQ+
Sbjct: 904 LAERMKKRDGV-GPNVGDRVDYVII--GGGDKLFNRAEDPLYVLEQNLQLDSIYYLSNQL 960
Query: 879 SKPLLRIFEPIL--KNASKELLSGDHTRS---ISISTPSNSGIMKFAKRQLSCIGCKALI 933
P++ I PI+ K A+ + R + ++ G+M F K+ +C CK ++
Sbjct: 961 QNPIISIIAPIIGEKQANSMFIVKSIKRQSGPVGAASKQKGGLMSFVKKVDTCKSCKRVL 1020
Query: 934 --SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
+ G LC+ C R ELY + + V+ LE F RLWTQCQ C GSLH +VLC++++C I
Sbjct: 1021 RKNEGPLCNDCLSRSGELYMEALYDVRTLEERFSRLWTQCQRCSGSLHNEVLCSNKNCDI 1080
Query: 992 FYRRKKAQKDMAEAKLQLDRW 1012
FY R KA+K++ E ++L +W
Sbjct: 1081 FYMRVKAKKELQEKVIELSKW 1101
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/354 (41%), Positives = 200/354 (56%), Gaps = 22/354 (6%)
Query: 54 EESLILRDIEQRQDFASRLAK-WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP- 111
EE L L D E + +K W+R P+ + + ++ I FQQLD + + +LP
Sbjct: 75 EEELSLMDHELVEKTECGQSKVWSRVPIPADFNAKTSDISFQQLD-------AEQAMLPG 127
Query: 112 -LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA 170
S + +IR FGVT +G+S+ C V GF+ Y Y+ P G ++I Q L
Sbjct: 128 QYDSNTNIVIRFFGVTDKGNSILCNVTGFKHYLYVPAPLGFHQENILTLQQYL------- 180
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGL 229
N V I++V K+SI + PFL+I V P ++ R ++G IQ +
Sbjct: 181 --NEHYENNVDSIKIVPKQSIWGFSGDAKIPFLQIFVKNPNLLNKIRTGFEKGYIQPNDK 238
Query: 230 GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDI 287
T N+ F LR MIDC IVG +WI +P KY+ + +S CQ E + Y D+
Sbjct: 239 WFVGGCTTYDNIAFPLRLMIDCGIVGMSWITLPASKYQLVPVNQRISTCQFEVNINYKDL 298
Query: 288 ISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVM 347
I+ EGE+S AP RI+SFDIECAGR G FPEP HD VIQ+AN+V++ G +PFIRNV
Sbjct: 299 IAHPAEGEWSHNAPLRIMSFDIECAGRPGVFPEPEHDSVIQIANVVSISGAAKPFIRNVF 358
Query: 348 TLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
T+ SC+PI G + + E D+L WRDFI EVDPDV+IGYN FD PYLI++
Sbjct: 359 TVNSCSPITGSQIFEHDKESDMLEHWRDFIVEVDPDVVIGYNTTNFDFPYLIDR 412
>gi|156093327|ref|XP_001612703.1| DNA polymerase delta catalytic subunit [Plasmodium vivax Sal-1]
gi|148801577|gb|EDL42976.1| DNA polymerase delta catalytic subunit, putative [Plasmodium vivax]
Length = 1096
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/614 (54%), Positives = 450/614 (73%), Gaps = 9/614 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SI++DLQN + E+R+R+A YC+KD LP RL+DKL+FI+NYVEMARVTG P
Sbjct: 481 QKEDVHYSIMNDLQNESPESRKRIATYCIKDGILPLRLIDKLLFIYNYVEMARVTGTPFV 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV SQL RK K+ N VIP+ YEGATVLE G+Y +PI+TLD
Sbjct: 541 YLLTRGQQIKVTSQLYRKCKELNYVIPSTYIKSGSNEKYEGATVLEPIKGYYIEPISTLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVN--KTPSGETFVKSNLQKGILPEIL 577
FASLYPSIM+A+NLCYSTLV +A L E V + S FVK +++KGILP I+
Sbjct: 601 FASLYPSIMIAHNLCYSTLVK-NNAEIEGLKQEDVTSIQGKSNIKFVKRSVKKGILPLIV 659
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGA-TVGQLPCIEISSS 636
EEL+ ARK+ K +K ++ + K VL+GRQLALKISANSVYG+TGA + GQLPC+E++ S
Sbjct: 660 EELIDARKKVKLLIKNEQNKITKMVLNGRQLALKISANSVYGYTGAASGGQLPCLEVAVS 719
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+T+ GR MI+ TK+ VE ++ G+EHN+ V+YGDTDSVMV+FG + AM LG++AA
Sbjct: 720 ITTLGRCMIDKTKETVEKYYSKSNGFEHNSTVVYGDTDSVMVKFGTNNIAEAMALGKDAA 779
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
IS F+ PIKLEFEKVY PYLL++KKRYAGL +T PE+ DKMD KGIETVRRD C+L+
Sbjct: 780 QRISKEFLHPIKLEFEKVYCPYLLLNKKRYAGLLYTTPERHDKMDCKGIETVRRDFCILI 839
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+ ++ L+K+L+++++ A++Y K I DLL N +D+SLLV+TK L KT DYE + H
Sbjct: 840 QQMMETVLNKLLIEKNLQSAIEYTKCKIKDLLTNNIDMSLLVVTKSLGKT--DYETRLPH 897
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELA+++++RD+ATAPNVGDRV Y+I+K KG YER+EDP+YVL+NN+ ID ++YL+
Sbjct: 898 VELAKKLKQRDSATAPNVGDRVSYIIVKGVKGQAQYERAEDPLYVLDNNLAIDYNHYLD- 956
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG 936
I L RIFE I++N S L G+HTR +I T S + + KF ++ + CIGC + I
Sbjct: 957 AIKNTLSRIFEVIMQN-SDSLFCGEHTRHKTILTSSQTALSKFLQKAVRCIGCNSSIKKP 1015
Query: 937 TLCSHCKG-REAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LC+HCK +E +Y + ++ + + F +LWT+CQ CQG+LH +V+C +RDCPIFYRR
Sbjct: 1016 PLCNHCKANKEFSIYMQKMNHFKTKQNEFFQLWTECQRCQGNLHAEVICMNRDCPIFYRR 1075
Query: 996 KKAQKDMAEAKLQL 1009
K +KDMA + Q+
Sbjct: 1076 AKIKKDMANVQEQI 1089
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 195/373 (52%), Gaps = 41/373 (10%)
Query: 66 QDFASRLAKWARP-PLSSGYVSQCQS----IMFQQLDIDYVIGDSNRELLPLSSG----- 115
++F LA + RP P + V Q + I+FQ +DI+Y + + ++ + G
Sbjct: 37 EEFNQLLATYERPSPYDANGVVQISNQSDLILFQ-IDIEYTVESIFKSMVFTNDGTPNGS 95
Query: 116 ---------------------SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPD 154
S +IRI+ VT +G+SV VH F PYFY+ P G +
Sbjct: 96 ALTSIFSPYKPLLQSNEKNYVSVPVIRIYTVTNDGYSVLVNVHNFFPYFYVEMPSGFDQE 155
Query: 155 DISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVA 214
D+ ++ + ++ Q + HIE+VQ S+MYY++ + FLKI V LP MV
Sbjct: 156 DLQKLEVMMNDSLNANSQYKIYDQKILHIEIVQTESLMYYKRDGKRDFLKITVLLPKMVP 215
Query: 215 SCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWI--EVPVGKYRKTAKT 272
S + + ++++ + + YE+N+ F LR++ID I G +W+ + + R K
Sbjct: 216 SLKKFFEGIVKVNNKSIGG-IVYEANLPFILRYLIDKKITGSSWLLCKKKLFHIRPRHKK 274
Query: 273 LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH-FPEPTHDPVIQVAN 331
+S C LE D Y + EGE+ ++ R+LSFDIEC G FPE +DP+IQ+++
Sbjct: 275 VSNCSLEIDISYEHVEPMLLEGEYQQIPRLRVLSFDIECIKLDGKGFPEAKNDPIIQISS 334
Query: 332 LVTLQGEKQPF---IRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGY 388
++ QG+ P + + TLK CA I G +V+ F E+ +L AW +FI +DPD + GY
Sbjct: 335 ILYFQGD--PIGKCSKFIFTLKECASIPGSNVIWFHDEKTLLDAWSEFITRLDPDFLTGY 392
Query: 389 NICKFDLPYLIEK 401
NI FDLPY++ +
Sbjct: 393 NIINFDLPYILNR 405
>gi|363753924|ref|XP_003647178.1| hypothetical protein Ecym_5625 [Eremothecium cymbalariae DBVPG#7215]
gi|356890814|gb|AET40361.1| hypothetical protein Ecym_5625 [Eremothecium cymbalariae DBVPG#7215]
Length = 1092
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/617 (56%), Positives = 440/617 (71%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH+IIS L NG++ETRRRLAVYCLKDAYLP RLL+KLM + NY EM+RVTGVP S
Sbjct: 485 QKEDVHHTIISSLYNGDSETRRRLAVYCLKDAYLPLRLLEKLMALVNYAEMSRVTGVPFS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L++RGQ IKV+SQL RK Q ++VIPN+ + S++ Y+GATV+E G+Y+ PIATLD
Sbjct: 545 YLITRGQQIKVISQLFRKCFQIDIVIPNMHTSPSDE-QYQGATVIEPIRGYYDVPIATLD 603
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL +LNL E TP+G+ FV ++GILP IL
Sbjct: 604 FNSLYPSIMMAHNLCYTTLCNKSTVARLNLKENEDYIITPNGDYFVTEKRRRGILPTILH 663
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DLK DP K VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 664 ELISARKRAKTDLKNETDPFRKDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 723
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GR MIE TK+ VE+K+T G+ H+A VIYGDTDSVMV+FG ++ M LG EAA Y
Sbjct: 724 SFGRTMIEATKRAVEEKYTVKNGFSHDAVVIYGDTDSVMVKFGKTDLQETMNLGAEAAAY 783
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEKVY+PYLLI+KKRYAGLYWT PEK DK+D KG+ +VRRD+C LV
Sbjct: 784 VSSLFKHPINLEFEKVYFPYLLINKKRYAGLYWTRPEKHDKLDQKGLASVRRDSCPLVSL 843
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL+DR++PGA+ +V+STI D+L NR D+S L+I+K L + Y H
Sbjct: 844 VMNKVLRMILIDRNVPGALDFVRSTIDDVLQNRADISKLIISKTLAPS---YTNSQPHAV 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM+KRD PNVGDRV YVI+ K Y R+EDP+YVLE NI ID+ YYL Q+
Sbjct: 901 LAERMKKRDGV-GPNVGDRVDYVIV--GGNDKLYNRAEDPLYVLEQNIQIDSKYYLTTQL 957
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGT 937
P++ I ++ + ++I IST + G+M F K+ C GCK + G
Sbjct: 958 QNPIISIIA--PIIGERQANAMFVVKAIKISTGNQKGGLMGFIKKVQMCKGCKGPLKKGE 1015
Query: 938 --LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LC +CK R ELY K + V+ELE F RLWTQCQ C GSLH +VLC++++C IFY R
Sbjct: 1016 GPLCGNCKERSGELYLKAMYDVRELEEKFARLWTQCQRCSGSLHNEVLCSNQNCDIFYMR 1075
Query: 996 KKAQKDMAEAKLQLDRW 1012
KA+K++ E +L +W
Sbjct: 1076 VKAKKELREKVEELSKW 1092
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 213/396 (53%), Gaps = 25/396 (6%)
Query: 14 PTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLA 73
P+ + + Q +P P +D VF E LL D E++ ++ Q+ A
Sbjct: 41 PSDRYRKQSHQGYKSPQVPNTSGN-VDPTVFERE-LLMMDHETVTAQEKNQQ-------A 91
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
W R + S + + + FQQLD + + R+ +AA++R FGVT G+SV
Sbjct: 92 TWPRRGIPSDFEANTCDLSFQQLDAEQAVLPGCRD-----GNTAAVVRFFGVTDAGNSVL 146
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
C V GF+ Y Y+ P G P S ++L+ + N K V IE+V K+SI
Sbjct: 147 CNVTGFKHYMYVPAPSGFRP---SSDLKVLKDYL-----NDKFDNVVDSIEVVWKQSIWG 198
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCN 252
Y + FLK++V P + R ++G + + + T N+ F LR MIDC
Sbjct: 199 YSGDEKLQFLKVLVPDPYGLNKVRTAFEKGYVNPNDTWFQGGTTTYDNIAFTLRLMIDCG 258
Query: 253 IVGGNWIEVPVGKYRKTAK--TLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIE 310
IVG +WI +P GKY K +S CQ E Y D+I+ EG++ AP RILSFDIE
Sbjct: 259 IVGMSWITLPKGKYTLIPKHQKVSSCQFEVAINYKDLIAHPAEGDWVHSAPLRILSFDIE 318
Query: 311 CAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVL 370
CAGR G FPEP DPVIQ+AN+V++ G +PFIRNV T++SCAPI G + E E D+L
Sbjct: 319 CAGRVGVFPEPDTDPVIQIANVVSIAGHSKPFIRNVFTVRSCAPITGSQIFEHEREEDML 378
Query: 371 LAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHH 406
WRDF+ +VDPDV+IGYN FD PYLI + H
Sbjct: 379 KHWRDFVVQVDPDVIIGYNTTNFDFPYLINRAAALH 414
>gi|389582644|dbj|GAB65381.1| DNA polymerase delta catalytic subunit [Plasmodium cynomolgi strain
B]
Length = 1159
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/613 (53%), Positives = 449/613 (73%), Gaps = 7/613 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SI++DLQN + E+R+R+A YC+KD LP RL+DKL+FI+NYVEMARVTG P
Sbjct: 544 QKEDVHYSIMNDLQNESPESRKRIATYCIKDGILPLRLIDKLLFIYNYVEMARVTGTPFV 603
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV SQL RK K+ N VIP+ YEGATVLE G+Y +PI+TLD
Sbjct: 604 YLLTRGQQIKVTSQLYRKCKELNYVIPSTYIKSGSNEKYEGATVLEPIKGYYIEPISTLD 663
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET-FVKSNLQKGILPEILE 578
FASLYPSIM+A+NLCYSTLV + E + G FVK +++KGILP I+E
Sbjct: 664 FASLYPSIMIAHNLCYSTLVKNNSEIEGLKQEEVTSIQGKGNIKFVKRSVKKGILPLIVE 723
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGA-TVGQLPCIEISSSV 637
EL+ ARK+ K +K ++ + K VL+GRQLALKISANSVYG+TGA + GQLPC+E++ S+
Sbjct: 724 ELIDARKKVKLLIKNEQNKITKMVLNGRQLALKISANSVYGYTGAASGGQLPCLEVAVSI 783
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
T+ GR MI+ TK+ VE ++ G+E+N+ V+YGDTDSVMV+FG ++ AM LG++AA
Sbjct: 784 TTLGRSMIDKTKETVEKYYSRSNGFEYNSTVVYGDTDSVMVKFGTNSIAEAMALGKDAAQ 843
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
IS F+ PIKLEFEKVY PYLL++KKRYAGL +T PEK DKMD KGIETVRRD C+L++
Sbjct: 844 RISKEFLHPIKLEFEKVYCPYLLLNKKRYAGLLYTTPEKHDKMDCKGIETVRRDFCILIQ 903
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ L+K+L+++++ A++Y KS I DLL N +D+SLLV+TK L KT DYE + HV
Sbjct: 904 QMMETVLNKLLIEKNLNSAIEYTKSKIKDLLTNNIDMSLLVVTKSLGKT--DYETRLPHV 961
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA+++++RD+ATAPNVGDRV Y+I+K KG YER+EDP+YVL+NN+ ID ++YL+
Sbjct: 962 ELAKKLKQRDSATAPNVGDRVSYIIVKGVKGQAQYERAEDPLYVLDNNLAIDYNHYLD-A 1020
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT 937
I L RIFE I++N S L G+HTR +I T S + + KF ++ + CIGC + I
Sbjct: 1021 IKNTLSRIFEVIMQN-SDSLFCGEHTRHKTILTSSQTALSKFLQKAVRCIGCNSSIKKPP 1079
Query: 938 LCSHCK-GREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC+HCK +E +Y + ++ + + F +LWT+CQ CQG+LH +V+C +RDCPIFYRR
Sbjct: 1080 LCNHCKMNKEFSIYMQKMNHFKTKQNEFFQLWTECQRCQGNLHAEVICMNRDCPIFYRRA 1139
Query: 997 KAQKDMAEAKLQL 1009
K +KDMA + Q+
Sbjct: 1140 KIKKDMANVQEQI 1152
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 190/370 (51%), Gaps = 35/370 (9%)
Query: 66 QDFASRLAKWARP-PLSSG---YVSQCQSIMFQQLDIDYVIGDSNRELLPLSSG------ 115
++F L+ + RP P + +VS + ++ Q+DI+Y + + ++ + G
Sbjct: 100 EEFNQLLSTYERPSPYDTNGTIHVSNQKDLILFQIDIEYTVDSIFKSMVFTNDGTPNGSA 159
Query: 116 --------------------SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDD 155
S +IRI+ VT +G+SV VH F PYFY+ P +D
Sbjct: 160 LTDIFSPYRTLFQNNEKNYVSVPVIRIYTVTNDGYSVLVNVHNFFPYFYVEMPSHFDKED 219
Query: 156 ISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVAS 215
+ ++ + ++ + + +IE+V+ S+MYY++ + FLKI V LP MV S
Sbjct: 220 LLKLECMMNDNLNANSQYKIYDKKILNIEIVKTESLMYYKRDGKKDFLKITVLLPKMVPS 279
Query: 216 CRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTL 273
+ + + ++G + + YE+N+ F LR++ID I G +W+ + R K +
Sbjct: 280 LKKFFESVVNVNGKSIGG-IVYEANLPFILRYIIDKKITGSSWLLCKNNHFHIRPKHKKI 338
Query: 274 SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH-FPEPTHDPVIQVANL 332
S C E D Y I E E+ ++ RI+SFDIEC G FPE +DP+IQ++++
Sbjct: 339 SNCSFEIDISYEHIEPMPLENEYQQIPKIRIVSFDIECIKLDGKGFPEAKNDPIIQISSI 398
Query: 333 VTLQGEK-QPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNIC 391
+ QG+ + + TLK CA I G +V+ F E+ +L AW +FI +DPD + GYNI
Sbjct: 399 LYFQGDPIGKCSKFIFTLKECASIPGSNVIWFSDEKTLLDAWSEFITRLDPDFLTGYNII 458
Query: 392 KFDLPYLIEK 401
FDLPY++ +
Sbjct: 459 NFDLPYILNR 468
>gi|296477407|tpg|DAA19522.1| TPA: DNA polymerase delta catalytic subunit [Bos taurus]
Length = 987
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/506 (65%), Positives = 408/506 (80%), Gaps = 5/506 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N +EMARVTGVP+
Sbjct: 484 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTGVPLG 543
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 544 YLLSRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 601
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE
Sbjct: 602 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKASVRKGLLPQILEN 661
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 662 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGRLPCLEISQSVTG 721
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 722 FGRQMIEKTKQLVETKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 781
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 782 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 841
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 842 LVTASLRRLLIDRDPSGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 901
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+
Sbjct: 902 LAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL 961
Query: 879 SKPLLRIFEPILKNASKE--LLSGDH 902
+KPLLRIFEPIL E LL GDH
Sbjct: 962 AKPLLRIFEPILGEGRAEAVLLRGDH 987
Score = 327 bits (837), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/336 (48%), Positives = 214/336 (63%), Gaps = 10/336 (2%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELL---PLSSGSAAIIRIFGVTREG 129
A+W RP Q + ++FQQL+ID+ + + R L P S S I+R FGVT EG
Sbjct: 76 ARWLRP-APPALDPQMEPLIFQQLEIDHYVAPA-RPLPGAPPPSQDSVPILRAFGVTNEG 133
Query: 130 HSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQ 187
SVCC +HGF PYFY P G GP+ +S + L + R K V +E+
Sbjct: 134 VSVCCHIHGFAPYFYTPAPPGFGPEHLSELQRELSAAISRDQRGGKELTGPAVLAVELCS 193
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRF 247
+ S+ Y PFL+I +ALP ++A R +L++GI+L GLG SF YE+NV F +RF
Sbjct: 194 RESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRLAGLGTPSFAPYEANVDFEIRF 253
Query: 248 MIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRIL 305
M+D +IVG NW+E+P GKY R K + CQLE D L+SD+IS PEGE+ ++AP R+L
Sbjct: 254 MVDTDIVGCNWLELPAGKYILRPEGKA-TLCQLEADVLWSDVISHPPEGEWQRIAPLRVL 312
Query: 306 SFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFET 365
SFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E
Sbjct: 313 SFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYER 372
Query: 366 ERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 373 EEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 408
>gi|145514650|ref|XP_001443230.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410608|emb|CAK75833.1| unnamed protein product [Paramecium tetraurelia]
Length = 980
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/645 (52%), Positives = 452/645 (70%), Gaps = 36/645 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SII LQN N ETR+R+AVYCLKDA LP L+DKL ++NY EMARVTGVP++
Sbjct: 333 QKEDVHYSIIYTLQNKNPETRKRIAVYCLKDAELPILLMDKLCCLYNYAEMARVTGVPVN 392
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L RGQ IKV SQLLRKAK + +IP ++Q Y+GA VL+ FY+ PIATLD
Sbjct: 393 YLFMRGQQIKVASQLLRKAKHYDFIIPTEHFKSTDQ-EYQGAFVLDPVKNFYKVPIATLD 451
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTP-SGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+N+CYSTL+ K+ L E V +P + FVK N++KG+LP ILE
Sbjct: 452 FASLYPSIMMAHNMCYSTLLNTS-PFKVGLADEQVTVSPETNAIFVKPNVRKGMLPLILE 510
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
+L+ ARK+AK L + DP +KAVLDGRQLALKISANSVYGFTGA VGQLPC+EIS+S+T
Sbjct: 511 DLINARKKAKNQLAQETDPFKKAVLDGRQLALKISANSVYGFTGAQVGQLPCLEISASIT 570
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
S+GRQMI+ T+ V + ++ G E +AEVIYGDTDSVMV+FG +VE AM LGREAA
Sbjct: 571 SFGRQMIQFTRDTVLEHYSKKNGAEFDAEVIYGDTDSVMVKFGDYSVEKAMALGREAAAL 630
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
IS FI+PIKLEFEKVYYPYLL+++KRYAG WT P+K DK+DTKGIE+VRRDNC L++
Sbjct: 631 ISKKFIQPIKLEFEKVYYPYLLMNRKRYAGQLWTKPDKPDKIDTKGIESVRRDNCFLIRK 690
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL--------------- 803
+VTE L+ +L+ +D AVQY K I +L +N++D+S LVITK L
Sbjct: 691 MVTEILNFLLIKQDEKSAVQYTKEQIRNLYLNKVDISELVITKSLNSKKEDKDNNNNNNN 750
Query: 804 ---------------TKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKG 848
K +Y+ K AHV +AE+M+ RDA+ AP+ GDR+ Y+II+ AKG
Sbjct: 751 NNNKEKKKNQNEDDGNKLTKNYKQKQAHVVVAEKMQNRDASNAPSAGDRIAYIIIQGAKG 810
Query: 849 AKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISI 908
K YE +EDP+ VLE + PID YY+ NQI KP++R+FE ++ N + + GDHT S I
Sbjct: 811 TKTYENAEDPVEVLEKDFPIDFDYYVNNQIKKPIMRLFEFVIPNP-ESIFVGDHTMSRYI 869
Query: 909 STPS-NSGIMKFAKRQLSCIGCKALI-SNGTLCSHCKGREAELYCKTVSQVQELEVLFGR 966
+ NS + KF +++ +C+ CK +I N LC+ C + E+ K+ ++QEL++ + +
Sbjct: 870 PKVNINSALGKFVQKKTACLNCKKVIKDNEALCNFCLDKTLEMMTKSSIKLQELQINYHK 929
Query: 967 LWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDR 1011
WT CQ CQGSL D+LC++RDC I+Y+R K Q+D+ E ++D+
Sbjct: 930 YWTTCQSCQGSLLGDILCSNRDCEIYYKRIKVQRDLKEQWDEIDK 974
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 145/255 (56%), Gaps = 10/255 (3%)
Query: 151 MGPDDISHFHQILEGRM-REANRNSKVPQFVRHIEMVQKRSIMYYQ-QQKSQPFLKIVVA 208
+ P I F + L + ++ N K P + IE+ QK SI YY+ K Q +LKI V
Sbjct: 9 LEPQHIQQFQKELNVLLAKQKNFGGKEP--IVKIEVCQKESIRYYKGDNKKQNYLKIYVV 66
Query: 209 LPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRK 268
PT VA R L ++ +T+ESN+ +ALRFMI+ +IVG WIE+ R+
Sbjct: 67 QPTFVAQIRNFLKSDNRMVCDMELPQLTFESNIPYALRFMIEYDIVGMGWIELKDYIIRE 126
Query: 269 TAKTLSYCQLE--FDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPV 326
+S CQ+E DC + I P E S++AP RILSFDIECA KG FP HDP+
Sbjct: 127 NKNKISSCQIEVNIDCQFVKAI---PLDEKSEIAPLRILSFDIECAAEKG-FPNEEHDPI 182
Query: 327 IQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMI 386
IQ+A +V + + IR V TL C I G V SF+ E D+L ++ F + +DPD++I
Sbjct: 183 IQIACIVKVHNRNEELIRVVFTLGDCEKIPGAWVKSFQKEEDLLNEFQVFFQGLDPDIII 242
Query: 387 GYNICKFDLPYLIEK 401
GYNI FD+PY++ +
Sbjct: 243 GYNIQNFDIPYILNR 257
>gi|313247101|emb|CBY35929.1| unnamed protein product [Oikopleura dioica]
Length = 852
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/806 (45%), Positives = 504/806 (62%), Gaps = 99/806 (12%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW RP S + ++FQQ+D+D + + E P IRI+G ++G SVC
Sbjct: 45 KWGRPE-----GSMYEDLVFQQIDLDKYVEFVDGEPKP-------TIRIYGTDKKGSSVC 92
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS---KVPQFVRHIEMVQKRS 190
V GF+PYFY P G D F + L R+ A R + + V H E+ K +
Sbjct: 93 LFVKGFQPYFYTPAPDGFSEDYCGQFVRELNERVLGAMRGGMLKGISKAVLHAEICSKEN 152
Query: 191 IMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQL---DGLGMKSFMTYESNVLFALRF 247
I Y + PF+K+ VA ++ C+ +++ G ++ +G +F YES++ + +RF
Sbjct: 153 IYGYNSKGKIPFIKVTVASWQVMTPCKNVMEPGWKVTTDNGQFHHNFSMYESHIDYEIRF 212
Query: 248 MIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
M+DC + G +WI VP G++ + + + C +E + Y+DII PEGE++ +AP RI S+
Sbjct: 213 MVDCKVRGASWITVPKGQFHERMRKETTCSIEAEVDYADIIPHEPEGEWADIAPMRIFSY 272
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP------------- 354
DIECAGRKG FPE HDPVIQ+A +V QG+ PF+R + TL SC+P
Sbjct: 273 DIECAGRKGVFPEAEHDPVIQIACMVQNQGDPSPFVRMIFTLNSCSPIVGNHVFCYEKEI 332
Query: 355 -----------------IVGVDVMSFET----ERDVLLAWRDF----------------- 376
I G ++M+F+T R L ++F
Sbjct: 333 DMLEGFAELMRLVDPDIITGYNIMNFDTSYLVNRANTLKSQNFGYLGRIRSNLSKVKDAK 392
Query: 377 -------IRE---------VDPDVMIG---------YNICKFDLPYLIE-KEDVHHSIIS 410
RE + DVM+ YN+ +L E KEDVHHSIIS
Sbjct: 393 FSSKQMGTREYKEVNIDGRIQLDVMVSIVQNYKLRSYNLNAVSYHFLKEQKEDVHHSIIS 452
Query: 411 DLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKV 470
DLQ G RRRLAVYCLKDA LP RL+DKLMF+ N +EMARVTGVP+S+LL+RGQS+KV
Sbjct: 453 DLQAGTDSDRRRLAVYCLKDALLPLRLMDKLMFVVNTMEMARVTGVPVSYLLTRGQSVKV 512
Query: 471 LSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMA 530
++QLLR++ ++LV+P +K S+Q YEGATV++ G+Y++PI TLDFASLYPSIM A
Sbjct: 513 MAQLLRESSIRDLVMPVLKTEQSDQ--YEGATVIDPIRGYYKEPITTLDFASLYPSIMRA 570
Query: 531 YNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKAD 590
+NLCY+TL++ ++ R L KTP+G+ FVK +++G+LP IL+ LL AR +AK +
Sbjct: 571 HNLCYTTLLSNKNERS-KLDTSQFIKTPTGDEFVKPEVREGLLPLILKNLLEARGKAKKE 629
Query: 591 LKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKK 650
LK + P +K VLDGRQLALKISANSVYGFTGA VG+LPC+ IS SVT++GR MIE T K
Sbjct: 630 LKIEQCPFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCLPISGSVTAFGRLMIEQTMK 689
Query: 651 LVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLE 710
VE+ +T G+EH+A+V+YGDTDSVM++FG ++ + +LG EAA +++ FI PIKLE
Sbjct: 690 TVEEHYTRANGFEHDAKVVYGDTDSVMIKFGTSSIAKSFELGAEAAKFVTSQFINPIKLE 749
Query: 711 FEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILV 769
FEKVY PYLLI+KKRYAGLY+ +NP+K DKMD KGIETVRRDNC L L+++CL +L+
Sbjct: 750 FEKVYCPYLLINKKRYAGLYYSSNPDKHDKMDCKGIETVRRDNCRLASELISKCLDMMLI 809
Query: 770 DRDIPGAVQYVKSTISDLLMNRMDLS 795
+RD GA+ Y K TI DLL+NR+D+S
Sbjct: 810 NRDPDGAIDYAKDTIRDLLLNRVDIS 835
>gi|365983526|ref|XP_003668596.1| hypothetical protein NDAI_0B03180 [Naumovozyma dairenensis CBS 421]
gi|343767363|emb|CCD23353.1| hypothetical protein NDAI_0B03180 [Naumovozyma dairenensis CBS 421]
Length = 1107
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/618 (55%), Positives = 443/618 (71%), Gaps = 15/618 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SII+DLQNG++ETRRRLAVYCLKDAYLP RLL+KLM + NY EMARVTGVP S
Sbjct: 500 QKEDVHYSIITDLQNGDSETRRRLAVYCLKDAYLPLRLLEKLMALVNYTEMARVTGVPFS 559
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIATL 518
+LL+RGQ IKV+SQL RK Q + VIPN+ QA EQ YEGATV+E G+Y+ PIATL
Sbjct: 560 YLLARGQQIKVVSQLFRKCIQIDTVIPNMSSQASDEQ--YEGATVIEPIRGYYDVPIATL 617
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEIL 577
DF SLYPSIMMA+NLCY+TL +L L E +P+G+ FV +++GILP IL
Sbjct: 618 DFNSLYPSIMMAHNLCYTTLCNKATVERLKLKKDEEYIISPNGDYFVTDKVRRGILPIIL 677
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
+EL+ ARKRAK DLK DP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSV
Sbjct: 678 DELIQARKRAKKDLKNETDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSV 737
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
T++GR MI TK VE+K+T GY +A V+YGDTDSVMV+FG ++ AM+LG EAA
Sbjct: 738 TAFGRDMIMTTKNAVEEKYTKNKGYADDAIVVYGDTDSVMVKFGTTDLKEAMRLGTEAAA 797
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
++S F PI LEFEK Y+PYLLI+KKRYAGLYWTNP+KFD++D KG+ +VRRD+C LV
Sbjct: 798 FVSTLFKHPINLEFEKCYFPYLLINKKRYAGLYWTNPDKFDRLDQKGLASVRRDSCSLVS 857
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
++ + L KIL++R++P A+ +VK+TI+D+L N +D+S L+I+K L +Y H
Sbjct: 858 IVMNKVLKKILIERNVPSALDFVKATINDILHNNVDISKLIISKTL---APNYTNPQPHA 914
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
LA R++KRD PNVGDRV YVI K Y R+EDP+YVLE+N+ ID+ YYL NQ
Sbjct: 915 VLAARLKKRDGM-GPNVGDRVDYVI--TGGNDKLYNRAEDPLYVLEHNLQIDSKYYLNNQ 971
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISIST-PSNSGIMKFAKRQLSCIGCKALISNG 936
+ P++ K+ S +SI I+T + G+M F K+ C GCK + G
Sbjct: 972 LQNPIIS--IIAPIIGEKDANSMFVVKSIKINTGNTKGGLMGFVKKVEVCKGCKGPLKKG 1029
Query: 937 T--LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
LCS+C+ R ELY K + +V++LE F RLWT+CQ C GSLH +VLC++++C IFY
Sbjct: 1030 EGPLCSNCQERSGELYIKALYEVRDLEEKFARLWTECQRCAGSLHNEVLCSNKNCDIFYM 1089
Query: 995 RKKAQKDMAEAKLQLDRW 1012
R K +K++ E QL +W
Sbjct: 1090 RVKVKKELQEKMEQLSKW 1107
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/366 (40%), Positives = 208/366 (56%), Gaps = 19/366 (5%)
Query: 46 DETLLPEDEESLILRDIEQ-RQDFASRLAK----WARPPLSSGYVSQCQSIMFQQLDIDY 100
D+ L ES+ +++EQ DFA K + R P+ + I FQQ+D +
Sbjct: 68 DQDLHGTQLESVFEQELEQMEHDFALSQEKDTSIYKRTPIPKDFSPSTHDISFQQIDAEQ 127
Query: 101 VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGM---GPDDIS 157
++ ++ + ++ ++R FGVT EG SV C V GF+ Y Y+ P G+ P+++
Sbjct: 128 STLNNGTKV----NNTSTVVRFFGVTSEGCSVLCNVTGFKHYLYVPAPNGIESIDPNELK 183
Query: 158 HFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCR 217
+F L N+N V IE+VQK+SI Y + PF KI V P+++ R
Sbjct: 184 NFINYLNELFGTTNQNG-----VDSIEVVQKQSIWGYSGDGNLPFWKIYVTYPSLINKLR 238
Query: 218 GILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT--AKTLSY 275
++G + T N+ + LR M+DC IVG +WI +P GKY A LS
Sbjct: 239 TGFEKGHYTYNSWFTNGTTTYDNIAYPLRLMVDCGIVGMSWITLPKGKYTMIPDASKLST 298
Query: 276 CQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTL 335
CQLE Y D+++ E ++S MAP RILSFDIECAGR G FPEP DPVIQ+AN+V++
Sbjct: 299 CQLEVCINYKDLVAHPAENDWSHMAPLRILSFDIECAGRVGVFPEPEVDPVIQIANVVSV 358
Query: 336 QGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDL 395
G K+PFIRNV TL SC+PI G V S +TE ++L WR FI E DPD++IGYN FDL
Sbjct: 359 TGAKKPFIRNVFTLNSCSPITGSQVFSHDTEEEMLSHWRQFILEADPDLIIGYNTTNFDL 418
Query: 396 PYLIEK 401
PYLI +
Sbjct: 419 PYLINR 424
>gi|221487122|gb|EEE25368.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
GT1]
Length = 1268
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/607 (55%), Positives = 450/607 (74%), Gaps = 7/607 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+++I DL G +RRR+ VYCLKDAYLP RLL +L+F++NYVEM+RVTG P++
Sbjct: 651 QKEDVHYNMIGDLFRGCPSSRRRIGVYCLKDAYLPLRLLKELLFLYNYVEMSRVTGTPLN 710
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT-YEGATVLEARAGFYEKPIATL 518
FLL+RGQ IKV +QLLRK K+ N V+P VK+ G + YEGATVLE R GFY+KPIATL
Sbjct: 711 FLLTRGQQIKVTAQLLRKCKELNYVVPVVKRTGGDNSVQYEGATVLEPRKGFYDKPIATL 770
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEIL 577
DFASLYPSIM+A+N+CYSTLV A +N P + V T FVK ++++G+LP I+
Sbjct: 771 DFASLYPSIMIAHNICYSTLVASSAAHTMNNPDDVTVTTTSPPHKFVKKHIRRGVLPMIV 830
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG-QLPCIEISSS 636
EEL+AARK A+ ++ AKD + + VL+GRQLALKISANSVYG+TG T G QLPC+E++++
Sbjct: 831 EELIAARKAARKEMAAAKDEMTRQVLNGRQLALKISANSVYGYTGTTTGGQLPCLEVATT 890
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+T +GR MI+ T++ VE F + NA VIYGDTDSVMV FG ++ AMKLG EAA
Sbjct: 891 ITCFGRDMIDFTRREVEKMFCRDNQHACNATVIYGDTDSVMVDFGDFSIAEAMKLGEEAA 950
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
+S F+KPI+LEFEKVY P+LL++KKRYAGL +T PEK+DK+D+KGIETVRRD LLV
Sbjct: 951 QALSAKFVKPIRLEFEKVYCPFLLMNKKRYAGLLYTRPEKYDKIDSKGIETVRRDFSLLV 1010
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+ + L K+L+D+D+ A +Y + +++LL N++DLSLLV TK L K DY+ + H
Sbjct: 1011 QTMADTVLRKMLIDKDVEAAKEYTRRKVAELLQNKIDLSLLVQTKSLGKM--DYDTRLPH 1068
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELA+++RKRDA TAP+VGDRV YV+I+ AKG YER+EDP+YVLENN+PIDT +YLE
Sbjct: 1069 VELAKKLRKRDAGTAPSVGDRVSYVVIQGAKGQAQYERAEDPLYVLENNLPIDTQHYLEG 1128
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG 936
I KPL RIFE ++ N + L SG HT ++S + + KF +R + C+GC+++I G
Sbjct: 1129 -IKKPLCRIFEGVMSN-PESLFSGSHTMKRTVSISTQGALSKFVQRGVQCVGCRSVIREG 1186
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC C+ EAE+ ++++ E E LWT+CQ CQGSLHQDV+C +RDCPIFYRR
Sbjct: 1187 ALCRRCQENEAEIVVNKMAEMAEKEKEHSDLWTECQRCQGSLHQDVICINRDCPIFYRRA 1246
Query: 997 KAQKDMA 1003
K +KD+
Sbjct: 1247 KVKKDIG 1253
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 104/200 (52%), Gaps = 34/200 (17%)
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPE 293
T+ESNV F LR+++D G +W+ G Y R + + QLE D Y+D++ P
Sbjct: 376 TFESNVPFVLRYLVDTKTTGCSWLLGRGGAYVVRPASLQETSAQLELDIHYADLLPLPPA 435
Query: 294 GEFSKMAPFRILSFDIECAGRKGH-FPEPTHDPVIQVANLVTLQ---------------- 336
+ K+ P RILSFDIEC KG FPE DPVIQ++++V LQ
Sbjct: 436 ERWQKLPPLRILSFDIECVKLKGEGFPEAETDPVIQISSIVMLQSVPADLPGLSETDTNA 495
Query: 337 ---------------GEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVD 381
G ++P R + LK CA I G V+ F+ E+++L W +F+R+VD
Sbjct: 496 ATASVAKARKKRLSGGLERPLCRVLFALKECASIAGSVVLWFDDEKEMLAKWAEFVRQVD 555
Query: 382 PDVMIGYNICKFDLPYLIEK 401
PD + GYN FDL YLI +
Sbjct: 556 PDFLSGYNCVNFDLNYLITR 575
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCP------------QGMGPDDIS-HFHQILEG 165
+ R++GVT +G SVC VHGF PYFY P G+G + ++ L+
Sbjct: 181 MFRVYGVTEDGRSVCANVHGFFPYFYCPVPVSIQESLATQPGGGVGTNAVTARLRSFLDA 240
Query: 166 RMREANRNSKVPQFVR--HIEMVQKRSIMYYQ-QQKSQPFLKIVVALPTMVASCRGILDR 222
+ + ++K VR + M +K S+MYY Q F +I +ALP VA R +++R
Sbjct: 241 WLLKTQASAKAYD-VRCLDVRMEKKESLMYYTPGQTPSLFFRITLALPNWVAPTRTLIER 299
Query: 223 GIQLDG 228
GI ++
Sbjct: 300 GISIEA 305
>gi|237831459|ref|XP_002365027.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|211962691|gb|EEA97886.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|221506807|gb|EEE32424.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
VEG]
Length = 1268
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/607 (55%), Positives = 450/607 (74%), Gaps = 7/607 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+++I DL G +RRR+ VYCLKDAYLP RLL +L+F++NYVEM+RVTG P++
Sbjct: 651 QKEDVHYNMIGDLFRGCPSSRRRIGVYCLKDAYLPLRLLKELLFLYNYVEMSRVTGTPLN 710
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT-YEGATVLEARAGFYEKPIATL 518
FLL+RGQ IKV +QLLRK K+ N V+P VK+ G + YEGATVLE R GFY+KPIATL
Sbjct: 711 FLLTRGQQIKVTAQLLRKCKELNYVVPVVKRTGGDNSVQYEGATVLEPRKGFYDKPIATL 770
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEIL 577
DFASLYPSIM+A+N+CYSTLV A +N P + V T FVK ++++G+LP I+
Sbjct: 771 DFASLYPSIMIAHNICYSTLVASSAAHTMNNPDDVTVTTTSPPHKFVKKHIRRGVLPMIV 830
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG-QLPCIEISSS 636
EEL+AARK A+ ++ AKD + + VL+GRQLALKISANSVYG+TG T G QLPC+E++++
Sbjct: 831 EELIAARKAARKEMAAAKDEMTRQVLNGRQLALKISANSVYGYTGTTTGGQLPCLEVATT 890
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+T +GR MI+ T++ VE F + NA VIYGDTDSVMV FG ++ AMKLG EAA
Sbjct: 891 ITCFGRDMIDFTRREVEKMFCRDNQHACNATVIYGDTDSVMVDFGDFSIAEAMKLGEEAA 950
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
+S F+KPI+LEFEKVY P+LL++KKRYAGL +T PEK+DK+D+KGIETVRRD LLV
Sbjct: 951 QALSEKFVKPIRLEFEKVYCPFLLMNKKRYAGLLYTRPEKYDKIDSKGIETVRRDFSLLV 1010
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+ + L K+L+D+D+ A +Y + +++LL N++DLSLLV TK L K DY+ + H
Sbjct: 1011 QTMADTVLRKMLIDKDVEAAKEYTRRKVAELLQNKIDLSLLVQTKSLGKM--DYDTRLPH 1068
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELA+++RKRDA TAP+VGDRV YV+I+ AKG YER+EDP+YVLENN+PIDT +YLE
Sbjct: 1069 VELAKKLRKRDAGTAPSVGDRVSYVVIQGAKGQAQYERAEDPLYVLENNLPIDTQHYLEG 1128
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG 936
I KPL RIFE ++ N + L SG HT ++S + + KF +R + C+GC+++I G
Sbjct: 1129 -IKKPLCRIFEGVMSN-PESLFSGSHTMKRTVSISTQGALSKFVQRGVQCVGCRSVIREG 1186
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC C+ EAE+ ++++ E E LWT+CQ CQGSLHQDV+C +RDCPIFYRR
Sbjct: 1187 ALCRRCQENEAEIVVNKMAEMAEKEKEHSDLWTECQRCQGSLHQDVICINRDCPIFYRRA 1246
Query: 997 KAQKDMA 1003
K +KD+
Sbjct: 1247 KVKKDIG 1253
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 104/200 (52%), Gaps = 34/200 (17%)
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPE 293
T+ESNV F LR+++D G +W+ G Y R + + QLE D Y+D++ P
Sbjct: 376 TFESNVPFVLRYLVDTKTTGCSWLLGRGGAYVVRPASLQETSAQLELDIHYADLLPLPPA 435
Query: 294 GEFSKMAPFRILSFDIECAGRKGH-FPEPTHDPVIQVANLVTLQ---------------- 336
+ K+ P RILSFDIEC KG FPE DPVIQ++++V LQ
Sbjct: 436 ERWQKLPPLRILSFDIECVKLKGEGFPEAETDPVIQISSIVMLQSVPADLPGLSETDTNA 495
Query: 337 ---------------GEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVD 381
G ++P R + LK CA I G V+ F+ E+++L W +F+R+VD
Sbjct: 496 ATACVAKARKKRLSGGLERPLCRVLFALKECASIAGSVVLWFDDEKEMLAKWAEFVRQVD 555
Query: 382 PDVMIGYNICKFDLPYLIEK 401
PD + GYN FDL YLI +
Sbjct: 556 PDFLSGYNCVNFDLNYLITR 575
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCP------------QGMGPDDIS-HFHQILEG 165
+ R++GVT +G SVC VHGF PYFY P G+G + ++ L+
Sbjct: 181 MFRVYGVTEDGRSVCANVHGFFPYFYCPVPVSIQESLATQPGGGVGTNAVTARLRSFLDA 240
Query: 166 RMREANRNSKVPQFVR--HIEMVQKRSIMYYQ-QQKSQPFLKIVVALPTMVASCRGILDR 222
+ + ++K VR I M +K S+MYY Q F +I +ALP VA R +++R
Sbjct: 241 WLLKTQASAKAYD-VRCLDIRMEKKESLMYYTPGQTPSLFFRITLALPNWVAPTRTLIER 299
Query: 223 GIQLDG 228
GI ++
Sbjct: 300 GISIEA 305
>gi|401407254|ref|XP_003883076.1| DNA polymerase, related [Neospora caninum Liverpool]
gi|325117492|emb|CBZ53044.1| DNA polymerase, related [Neospora caninum Liverpool]
Length = 1219
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/607 (55%), Positives = 452/607 (74%), Gaps = 7/607 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+S+I DL G +RRR+ VYCLKDAYLP RLL +L+F++NYVEM+RVTG P++
Sbjct: 602 QKEDVHYSMIGDLFRGCPSSRRRIGVYCLKDAYLPLRLLKELLFLYNYVEMSRVTGTPLN 661
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT-YEGATVLEARAGFYEKPIATL 518
FLL+RGQ IKV +QLLRK K+ N ++P VK+ G + YEGATVLE + GFY+KPIATL
Sbjct: 662 FLLTRGQQIKVTAQLLRKCKELNYLVPVVKRTGGDNSVQYEGATVLEPKKGFYDKPIATL 721
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEIL 577
DFASLYPSIM+A+N+CYSTLV +A K+ P + V T FVK+++++G+LP I+
Sbjct: 722 DFASLYPSIMIAHNICYSTLVAASEAHKMTNPDDVTVTTTLPPHKFVKAHVRRGVLPMIV 781
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG-QLPCIEISSS 636
EEL+AARK A+ ++ AKD + K VL+GRQLALKISANSVYG+TG T G QLPC+E++++
Sbjct: 782 EELIAARKAARKEMAAAKDEMTKQVLNGRQLALKISANSVYGYTGTTTGGQLPCLEVATT 841
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+T +GR MI+ T++ VE F NA VIYGDTDSVMV FG ++ AMKLG EAA
Sbjct: 842 ITCFGRDMIDFTRREVEKMFCKDKTRACNATVIYGDTDSVMVDFGDFSIAEAMKLGEEAA 901
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
+S F KPI+LEFEKVY P+LL++KKRYAGL +T PEK+DK+D+KGIETVRRD LLV
Sbjct: 902 QALSAKFTKPIRLEFEKVYCPFLLMNKKRYAGLLYTRPEKYDKIDSKGIETVRRDFSLLV 961
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
+ + L K+L+D+D+ A +Y ++ +++LL N++DLSLLV TK L K DY+ + H
Sbjct: 962 QTMADTVLRKMLIDKDVEAAKEYTRTKVAELLQNKIDLSLLVQTKSLGKM--DYDTRLPH 1019
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
VELA+++RKRDA TAP+VGDRV YV+I+ +KG YER+EDP+YVLE+N+PIDT +YLE
Sbjct: 1020 VELAKKLRKRDAGTAPSVGDRVSYVVIQGSKGQAQYERAEDPLYVLEHNLPIDTQHYLEG 1079
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG 936
I KPL RIFE ++ N + L SG HT ++S + + KF +R L C+GC+A+I G
Sbjct: 1080 -IKKPLCRIFEGVMSN-PESLFSGVHTMKRTVSISTQGALSKFVQRGLQCVGCRAVIREG 1137
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC HC+ EA++ ++++ E E LWTQCQ CQGSLHQDV+C +RDCPIFYRR
Sbjct: 1138 ALCRHCQKDEAQIVVNKLTEMAEKEKEHSDLWTQCQRCQGSLHQDVICINRDCPIFYRRA 1197
Query: 997 KAQKDMA 1003
K +K++
Sbjct: 1198 KVKKEIG 1204
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 151/369 (40%), Gaps = 103/369 (27%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQ------------GMGPDDIS-HFHQI 162
++ + R++GVT +G SVC VHGF PYF+ P G G + ++
Sbjct: 178 TSPMFRVYGVTEDGRSVCANVHGFFPYFFCPVPASIQESLARQPGGGEGTNAVTARLRAF 237
Query: 163 LEGRMREANRNSKVPQFVR--HIEMVQKRSIMYY-QQQKSQPFLKIVVALPTMVASCRGI 219
L+ + + ++K + VR + M +K S+MYY Q F +I + LP VA R +
Sbjct: 238 LDAWLLKTQASAKAYE-VRCLDVRMEKKESLMYYVPGQGPSLFFRITLVLPNWVAPTRTL 296
Query: 220 LDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLE 279
++RGI ++ L + V GN G R A+ + E
Sbjct: 297 IERGISIEA------------SLSGPPPPAVASPVAGN------GDSRSAAQDEDWLDEE 338
Query: 280 FDCLYSDIISRHPEGE-----------------------FSKMAPFRILSF--------- 307
D +R P E F PF +L +
Sbjct: 339 IDDAAGTPAARRPASEALQAANAIAGSGAGAKVSLPPSTFESNVPF-VLRYLVDTKTTGC 397
Query: 308 ----DIECAGRKGH-FPEPTHDPVIQVANLVTLQ-------------------------- 336
DIEC KG FPE DPVIQ++++V LQ
Sbjct: 398 SWLVDIECVKLKGEGFPEAETDPVIQISSIVVLQSPPTERPEHAEAANSPAARAAQARQK 457
Query: 337 ----GEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICK 392
G ++P R + L+ CAPI G V+ F+ E+++L W +F+R+VDPD + GYN
Sbjct: 458 RLSGGLERPVCRVLFALRECAPIAGSVVLWFDDEKEMLAKWAEFVRQVDPDFLSGYNCVN 517
Query: 393 FDLPYLIEK 401
FDL YLI +
Sbjct: 518 FDLNYLITR 526
>gi|367000613|ref|XP_003685042.1| hypothetical protein TPHA_0C04580 [Tetrapisispora phaffii CBS 4417]
gi|357523339|emb|CCE62608.1| hypothetical protein TPHA_0C04580 [Tetrapisispora phaffii CBS 4417]
Length = 1096
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/617 (54%), Positives = 442/617 (71%), Gaps = 13/617 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SII+DLQNG++ETRRRLAVYCLKDAYLP RLL+ LM + NY EM+RVTGVP S
Sbjct: 489 QKEDVHYSIITDLQNGDSETRRRLAVYCLKDAYLPLRLLENLMALVNYTEMSRVTGVPFS 548
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK + + +IPN+ GS++ YEGATV+E G+Y+ PIATLD
Sbjct: 549 YLLSRGQQIKVVSQLFRKCLEIDTLIPNMGSQGSDE-QYEGATVIEPIRGYYDLPIATLD 607
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL E ++L+L E TP+ + FV + + GILP IL
Sbjct: 608 FNSLYPSIMMAHNLCYTTLCNRETVQRLDLKLNEDYIITPNNDYFVTTKKRHGILPIILN 667
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DLK KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 668 ELISARKRAKNDLKNEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 727
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
++GR MI TK V++K++ GY+++A V+YGDTDSVMV+FG + AM+LG EAA Y
Sbjct: 728 AFGRDMIMTTKNAVQEKYSIKNGYKNDAVVVYGDTDSVMVKFGTSDLGEAMELGTEAAAY 787
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+PYLLI+KKRYAGLYWT EK+DK+D KG+ +VRRD+C LV
Sbjct: 788 VSSLFKDPINLEFEKAYFPYLLINKKRYAGLYWTKTEKYDKLDQKGLASVRRDSCPLVSI 847
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L IL++R++ GA+ Y+KS I +LL N+ D+S L+I+K L +Y H
Sbjct: 848 VMNKVLKMILIERNVDGALAYIKSVIDELLHNKADISKLIISKTL---APNYTNPQPHQV 904
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
L ERM++RD PNVGDRV Y+II K Y R+EDP+Y LE+NI +D+ YYL NQ+
Sbjct: 905 LTERMKRRDGV-GPNVGDRVDYIII--GGNDKLYNRAEDPLYALEHNIQVDSRYYLTNQL 961
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPS-NSGIMKFAKRQLSCIGCKALISNGT 937
P++ K+ S +SI I+T + G+M F K+ C CK ++ G
Sbjct: 962 QNPIIS--IIAPIIGEKQANSMFVVKSIKINTGTMKGGLMGFMKKVEVCRYCKGPLTKGE 1019
Query: 938 --LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
LCS+CK R ELY KT+ +V++L+ F R+WTQCQ C G+LH +VLC++++C IFY R
Sbjct: 1020 SPLCSNCKERSGELYMKTLYEVRDLQEKFARVWTQCQRCAGTLHNEVLCSNKNCDIFYMR 1079
Query: 996 KKAQKDMAEAKLQLDRW 1012
K +K++ E QL++W
Sbjct: 1080 VKVKKELQEKVEQLNKW 1096
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 202/364 (55%), Gaps = 23/364 (6%)
Query: 41 EDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDY 100
E F E L E E +++ D + + + R P++S + I FQQLD D
Sbjct: 70 ESAFEKELLEMEHEAAIV--------DEQASIDTYGREPVASDFSPDTHDISFQQLDCDQ 121
Query: 101 -VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF 159
++ S E P I+R FGVT+EGHS+ C V GF+ Y Y+ P D
Sbjct: 122 TMLSGSTDENTPF------IVRFFGVTQEGHSILCNVTGFKHYLYVPSPIAQEQTD---- 171
Query: 160 HQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGI 219
Q L+G ++ N ++ V IE+ Q++SI Y PF K+ + P M+ R
Sbjct: 172 KQDLDGFVKYINE--QLDNCVDSIEITQRQSIWGYSGDTKLPFWKVYLKNPHMINKLRTS 229
Query: 220 LDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQ 277
++G + T N+ + LR MIDC IVG +WI +P KY+ +S CQ
Sbjct: 230 FEKGYFTYKSWFSNGTTTYDNIAYTLRLMIDCGIVGMSWITLPKSKYKLITEQNKISNCQ 289
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 337
LE Y D+IS EG++S AP RILSFDIECAGR G FPEP HD VIQ+AN+V++ G
Sbjct: 290 LEVSINYRDLISHPAEGDWSHSAPLRILSFDIECAGRIGVFPEPEHDSVIQIANVVSIAG 349
Query: 338 EKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY 397
K+PFIRNV T+ +C+PI G + S E E D+L WR+F+ + DPDV+IGYN FDLPY
Sbjct: 350 AKRPFIRNVFTVDTCSPITGSHIFSHEKEEDMLRQWREFVVKADPDVIIGYNTSNFDLPY 409
Query: 398 LIEK 401
LI++
Sbjct: 410 LIDR 413
>gi|281210761|gb|EFA84927.1| DNA polymerase delta catalytic subunit [Polysphondylium pallidum
PN500]
Length = 1999
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/517 (62%), Positives = 404/517 (78%), Gaps = 7/517 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH SII+DLQNG + RRRLAVYCLKDA LP +LLDKLM I NY EMARVTGVP+S
Sbjct: 998 QKEDVHFSIITDLQNGTDDDRRRLAVYCLKDAMLPLKLLDKLMLIINYSEMARVTGVPMS 1057
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RG+SIKVLSQL RKA ++L++P K G + ++GA V+E GFY+ PIATLD
Sbjct: 1058 YLLGRGESIKVLSQLYRKAMLEDLILPTQKVTG-KGDKFKGAVVIEPTPGFYDTPIATLD 1116
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F SLYPSIMMA+NLCYSTL+T +D K LP TPSG+ F+ N++KG+LP ILEE
Sbjct: 1117 FTSLYPSIMMAHNLCYSTLIT-QDYIK-TLPNTEYTVTPSGDAFILPNIKKGLLPRILEE 1174
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AK +LK DP +KAVLDGRQLALKISANSVYGFTGA VG+LPCIEIS SVT+
Sbjct: 1175 LLTARKKAKEELKVETDPFKKAVLDGRQLALKISANSVYGFTGARVGKLPCIEISRSVTA 1234
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+M+ T+ VE K+T GY H+A++IYGDTDSVMV+FGV TVE AM LGR A+ +
Sbjct: 1235 FGREMLYKTRDFVEAKYTIANGYSHDAKIIYGDTDSVMVKFGVSTVEEAMDLGRHASKEV 1294
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ FI+PI L+FEKVYYPYLL++KK+YAGL+WT P+KFDKMD KG+E +RRD CLLV+N+
Sbjct: 1295 TKIFIRPINLDFEKVYYPYLLMAKKKYAGLFWTKPDKFDKMDVKGLENIRRDTCLLVRNV 1354
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
V+ L IL+D+DI A +Y KS ISDLL NR+DLS+LVITK L+K+ +Y+ + H EL
Sbjct: 1355 VSNILKMILIDKDIKKAEEYTKSVISDLLQNRLDLSMLVITKALSKS--EYKGRVIHNEL 1412
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A++MR R+ ATAPN+GDRVPYVI + K A YE++EDP+YVLE N+ +DT YY + Q+
Sbjct: 1413 AQKMRARNPATAPNLGDRVPYVITQGIKNAPIYEKAEDPLYVLEKNLLLDTKYYCDKQLK 1472
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISIST-PSNSG 915
PLLRIFEP+L + + + +GDHTR+I+ T PS+ G
Sbjct: 1473 APLLRIFEPLLPHP-ESIFTGDHTRTIATQTLPSSFG 1508
Score = 319 bits (817), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 157/343 (45%), Positives = 218/343 (63%), Gaps = 6/343 (1%)
Query: 64 QRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLP-LSSGSAAIIRI 122
Q D +L W+R P+ + + QS +FQQL++DY +P +G I+R+
Sbjct: 581 QVDDDTQQLQFWSRRPVPPIHC-ETQSFVFQQLEVDYAELKEPLAGMPGPPTGPVPIVRL 639
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRH 182
FG TR G+SV CKVHGF PYF+ISCP G D S F ++L +M E+ N+ Q V
Sbjct: 640 FGATRNGNSVLCKVHGFLPYFFISCPNGFTQADCSLFLKLLNKKMLESTTNNHTDQIVLA 699
Query: 183 IEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQ----LDGLGMKSFMTYE 238
I++ +K+SI+ Y +++I +A+P V CR +L+ G++ L + + T+E
Sbjct: 700 IDIEKKKSILGYNPAPPTDYIRITLAMPRYVPKCRDVLENGLKYQFALPNQPPRLYQTFE 759
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
S++ FALRF+ID I G +WIE+P YRK+ +LS CQ+E D + +
Sbjct: 760 SDIPFALRFLIDKQIPGCSWIELPANSYRKSETSLSTCQIEIDTSVETLTVHQIAPGWDD 819
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGV 358
+APFRILSFDIECAGRKG FPEP DPVIQ+AN+V +QGEK+P IRNV TLKSC+ IVG
Sbjct: 820 IAPFRILSFDIECAGRKGVFPEPKKDPVIQIANVVKIQGEKEPVIRNVFTLKSCSSIVGA 879
Query: 359 DVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V+S+E E +L W+ FI ++DPD++IGYNI FDLPYLIE+
Sbjct: 880 HVISYENEAQLLKEWKKFITKIDPDIIIGYNIANFDLPYLIER 922
>gi|449493366|ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit-like [Cucumis sativus]
Length = 573
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 294/369 (79%), Positives = 333/369 (90%), Gaps = 2/369 (0%)
Query: 35 DDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQ 94
+++F+DEDVFLDE+LL DE++LILRDIE+RQ ASR++KWARPPLS Y+SQ +SI+FQ
Sbjct: 30 EEDFVDEDVFLDESLL--DEDALILRDIEERQALASRISKWARPPLSQDYLSQSKSIVFQ 87
Query: 95 QLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPD 154
QL+IDYVIG+S++ELLP SG AAI+RIFGVTREGHSVCC VHGFEPYFYISCP GMGPD
Sbjct: 88 QLEIDYVIGESHKELLPNLSGPAAILRIFGVTREGHSVCCHVHGFEPYFYISCPSGMGPD 147
Query: 155 DISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVA 214
DIS FH+ LE RM+E NRN+K P FVR IE+VQ+RSIMYYQQQ Q FLKIVVALPTMV
Sbjct: 148 DISLFHRTLEARMKEVNRNNKAPNFVRRIELVQRRSIMYYQQQTFQSFLKIVVALPTMVT 207
Query: 215 SCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLS 274
SCRGILDRGIQ++G GMKSFMTYESNV FALRFMIDCN+VGGNWIEVPVGKY+K ++LS
Sbjct: 208 SCRGILDRGIQIEGFGMKSFMTYESNVXFALRFMIDCNVVGGNWIEVPVGKYKKXVRSLS 267
Query: 275 YCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVT 334
YCQLEFDCLYSD+IS EGEFSKMAPFRILSFDIECAGRKGHFPEPT DPVIQVANLVT
Sbjct: 268 YCQLEFDCLYSDLISHAXEGEFSKMAPFRILSFDIECAGRKGHFPEPTQDPVIQVANLVT 327
Query: 335 LQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFD 394
LQGE QPF+RNVMTL +C+PI GVDV+SF+TERDVLLAWRD IREVDPD++IGYNICKFD
Sbjct: 328 LQGEDQPFVRNVMTLNTCSPIAGVDVLSFDTERDVLLAWRDLIREVDPDIIIGYNICKFD 387
Query: 395 LPYLIEKED 403
LPYLIE+ +
Sbjct: 388 LPYLIERAE 396
Score = 202 bits (515), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/103 (95%), Positives = 101/103 (98%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFI+NYVEMARVTGVPIS
Sbjct: 470 QKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPIS 529
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGAT 502
FLLSRGQSIKVLSQLLRKAKQKNLVIPN K AGS+QGTYEGAT
Sbjct: 530 FLLSRGQSIKVLSQLLRKAKQKNLVIPNAKHAGSDQGTYEGAT 572
>gi|68063595|ref|XP_673793.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56491898|emb|CAI02404.1| hypothetical protein PB300723.00.0 [Plasmodium berghei]
Length = 580
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/578 (54%), Positives = 422/578 (73%), Gaps = 9/578 (1%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQ 495
RL+DKL+FI+NYVEMARVTG P +LL+RGQ I V SQL RK K+ N +IP+ S
Sbjct: 1 RLIDKLLFIYNYVEMARVTGTPFVYLLTRGQQIXVTSQLYRKCKELNYIIPSTYIKVSNN 60
Query: 496 GTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVN 555
+EGATVLE G+Y +PI+TLDFASLYPSIM+A+NLCYSTL+ D +L +
Sbjct: 61 DKFEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLIKNNDEIS-DLNKNDIT 119
Query: 556 KTPSGETF--VKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKIS 613
P F VK N+++G+LP I+EEL+ ARK KA +K ++P+ K VL+GRQLALKIS
Sbjct: 120 TVPGKNNFKFVKGNVKRGVLPLIVEELIRARKNVKAMMKNEQNPITKMVLNGRQLALKIS 179
Query: 614 ANSVYGFTGATVG-QLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGD 672
ANSVYG+TGA G QLPC+EI++S+T++GR MIE TK+ VE + G+EHNA V+YGD
Sbjct: 180 ANSVYGYTGAAAGGQLPCLEIATSITTFGRSMIEKTKETVEAYYCKNNGFEHNATVVYGD 239
Query: 673 TDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWT 732
TDSVMV+FG V AM+LG++AA+ IS F+ PIKLEFEKVY PYLL++KKRYAGL +T
Sbjct: 240 TDSVMVKFGTNDVGEAMRLGKDAAERISKEFLHPIKLEFEKVYCPYLLLNKKRYAGLLYT 299
Query: 733 NPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRM 792
NP K DKMD KGIETVRRD C+L++ ++ L+K+L+++D+ A++Y KS I DLL N +
Sbjct: 300 NPNKHDKMDCKGIETVRRDFCILIQQMMETVLNKLLIEKDLNSAIEYTKSKIKDLLTNNI 359
Query: 793 DLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAY 852
D+SLLV+TK L K +YE + HVELA+++++RD+ATAPNVGDRV Y+IIK KG Y
Sbjct: 360 DMSLLVVTKSLGKA--EYETRLPHVELAKKLKQRDSATAPNVGDRVSYIIIKGTKGQAQY 417
Query: 853 ERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPS 912
ER+EDP+YVL+NN+ ID ++YL+ I PL RIFE I++N S L G+HTR +I T S
Sbjct: 418 ERAEDPLYVLDNNLSIDHNHYLD-AIKNPLSRIFEVIMQN-SDSLFCGEHTRHKTILTSS 475
Query: 913 NSGIMKFAKRQLSCIGCKALISNGTLCSHCKG-REAELYCKTVSQVQELEVLFGRLWTQC 971
+ + KF K+ + CIGC + I LC+HCK +E +Y + + ++ + F +LWT+C
Sbjct: 476 QTALSKFLKKTIRCIGCNSSIKKPPLCNHCKANKEFSIYMQKIKDLKLKQNEFFQLWTEC 535
Query: 972 QECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQL 1009
Q CQG+LH DV+C +RDCPIFYRR K +KD+A + Q+
Sbjct: 536 QRCQGNLHIDVICMNRDCPIFYRRAKIKKDVANLQEQV 573
>gi|341904443|gb|EGT60276.1| hypothetical protein CAEBREN_32385 [Caenorhabditis brenneri]
Length = 1042
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/576 (56%), Positives = 419/576 (72%), Gaps = 30/576 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H+II DLQ G+ +TRRRLA YCLKDAYLP RLLDKLM I NY+EMARVTGVP++
Sbjct: 469 QKEDVEHNIIPDLQRGDEQTRRRLAQYCLKDAYLPLRLLDKLMSIINYIEMARVTGVPMN 528
Query: 460 FLLSRGQSIKV----------------LSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATV 503
FLL++GQ IKV LS +LR+ KQ N +P ++ + YEGATV
Sbjct: 529 FLLTKGQQIKVFLNPDFSHHFVFALQILSMMLRRCKQNNFFLPVIEANSGDGEGYEGATV 588
Query: 504 LEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV-TPEDARKLNLPPECVNKTPSGET 562
+E GFY +PIATLDFASLYPSIM+A+NLCY+TL+ P+ E +TPSG+
Sbjct: 589 IEPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLLKAPQGVEN-----EDYIRTPSGQY 643
Query: 563 FVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTG 622
F + ++G+LPEILE++LAARKRAK D+K KD ++ V +GRQLALKISANSVYGFTG
Sbjct: 644 FATKSKRRGLLPEILEDILAARKRAKNDMKNEKDEFKRMVYNGRQLALKISANSVYGFTG 703
Query: 623 ATVGQLPCIEISSSVTSYGRQMIEHTKKLVE---DKFTTVGGYEHNAEVIYGDTDSVMVQ 679
ATVG+LPC+EIS SVT++GR+MI+ TK VE K G +A+VIYGDTDSVMV+
Sbjct: 704 ATVGKLPCLEISQSVTAFGRKMIDMTKSEVERIYKKGALDGKCPADAKVIYGDTDSVMVK 763
Query: 680 FGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
FGV TV AM++G +AA +S F PIKLEFEKVY PYLLI+KKRYAGLY+T P+ DK
Sbjct: 764 FGVETVAQAMEIGLDAAKEVSKIFTPPIKLEFEKVYSPYLLINKKRYAGLYFTKPDVHDK 823
Query: 740 MDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVI 799
MD KG+ETVRRDNC LV ++ CL K+L++RD A+ + K TISDLL N++D+SLL+I
Sbjct: 824 MDCKGLETVRRDNCPLVAKVLGVCLEKLLIERDQQSALDFAKRTISDLLCNKIDISLLII 883
Query: 800 TKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPI 859
+K LTK+GD Y+ K AHVELA RM+KRDA +AP +GDRVPYV I AAK AYER+EDP
Sbjct: 884 SKELTKSGDKYQAKQAHVELAARMKKRDAGSAPRLGDRVPYVFIAAAKNVPAYERAEDPT 943
Query: 860 YVLENNIPIDTHYYLENQISKPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMK 918
+VL+NNIP+DT +YL NQ++KPL RIFEPIL + A K L+ G+HTR ++ G+
Sbjct: 944 FVLQNNIPLDTKHYLTNQLAKPLARIFEPILGDRAEKILVEGEHTRVRTVVQSKVGGLAA 1003
Query: 919 FAKRQLSCIGCKALI----SNGTLCSHCKGREAELY 950
F K+ +C+GCK+++ S +C HC+ + E++
Sbjct: 1004 FTKKSATCLGCKSVLPKMESENAVCKHCEPKLPEIF 1039
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/357 (35%), Positives = 193/357 (54%), Gaps = 34/357 (9%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
WARPP+ + ++I Q L+++ D + +S ++++GVT+ G+S+C
Sbjct: 47 WARPPVDK-EIGVTKNIACQVLEVETYHEDGS-----ATSYDRTNVKLYGVTKAGNSICV 100
Query: 135 KVHGFEPYFYIS---CPQGMGPDDISHFHQILEGRMREANRN---------SKVPQFVRH 182
V + P+FY PQG G + I L + A R KV + H
Sbjct: 101 IVTEYFPHFYFQHFQAPQGFGVEHIGTAQTALCNMVAAAKRRIGSGQSQLPGKVVDNLVH 160
Query: 183 IEMVQKRSIMYYQQQKSQ-PFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMT-YESN 240
IE+V+ ++ Y++ ++ PF+K+ + + R L G+ L G G + YESN
Sbjct: 161 IELVRGENLYYFRGADTKVPFVKVTGSQEAL-NKARQELKNGVNLMGKGPVNIGNLYESN 219
Query: 241 VLFALRFMIDCNIVGGNWIEV-------PVGKYR--KTAKTLSYCQLEFDCLYSDIISRH 291
+ + F+ + NIVG WIEV P GK R + S CQ+E +II
Sbjct: 220 INPVVMFLANTNIVGCGWIEVNKKKKYLPAGKCRILSGGEKSSRCQIEVIVDVKNIIVHE 279
Query: 292 PEGEFSKMAPFRI----LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVM 347
+GE++ +AP RI LS DIEC GR+G FPE DP+IQ+ANLV ++GE +PF+RN
Sbjct: 280 SDGEWAGIAPIRIVLRTLSLDIECIGRRGIFPEAIKDPIIQIANLVKIEGESEPFVRNCF 339
Query: 348 TLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
L +CAP+VG +++ E+ +L W +F+REVDPD++ GYNI FDLPY++++ V
Sbjct: 340 VLGTCAPVVGSNIIQCVNEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKV 396
>gi|123496446|ref|XP_001326973.1| polymerase zeta subunit [Trichomonas vaginalis G3]
gi|121909895|gb|EAY14750.1| polymerase zeta subunit, putative [Trichomonas vaginalis G3]
Length = 1045
Score = 640 bits (1651), Expect = e-180, Method: Compositional matrix adjust.
Identities = 327/625 (52%), Positives = 434/625 (69%), Gaps = 18/625 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+S+IS LQNG+ R RLA+YC+KDAYLP +L++KL+ + +E++RV VP++
Sbjct: 422 QKEDVHYSMISKLQNGSDTDRHRLAIYCVKDAYLPLQLMNKLLSVLTTIELSRVCHVPVN 481
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++L+RGQ I+V SQ+L K+ ++NL+IP + S+ Y+GATV+E G+Y PI TLD
Sbjct: 482 YVLNRGQQIRVFSQILYKSVRRNLIIPALTSQKSDD-QYQGATVIEPSTGYYTTPIPTLD 540
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F SLYPSIM+ +N+CYSTL+T D P K+P+ F K + G+LPEIL+E
Sbjct: 541 FNSLYPSIMIGHNICYSTLMTKPD------PNVQYEKSPNHCFFAKHDEFPGVLPEILKE 594
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LLAARK K ++EA DP++K V D RQLALKISANSVYGFTGATVG+LPC++IS SVT+
Sbjct: 595 LLAARKATKKLMEEATDPMQKKVFDKRQLALKISANSVYGFTGATVGKLPCLQISESVTA 654
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR MIE TK+LVE+K+ GY +A VIYGDTDSVMV FG T+E A+K G+EAA+Y+
Sbjct: 655 YGRSMIEMTKELVENKYNKQNGYSDDAHVIYGDTDSVMVNFGNITLEEAIKRGKEAANYV 714
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F PI ++FEK Y PYLLISKK YAGL WTN K+DK+D KGIE VRRDNC LV+ L
Sbjct: 715 SDHFPPPIHIDFEKAYKPYLLISKKHYAGLLWTNHIKYDKIDAKGIEAVRRDNCRLVQGL 774
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
V + L +LV D A +VK +SDL+ + +DLS LVI+KGL+K D Y+ K AHVEL
Sbjct: 775 VQKVLTLLLVKEDPGSAKVFVKKIVSDLVSDHIDLSFLVISKGLSKKADQYKGKQAHVEL 834
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A+RM KRD +AP +GDR+P+V+ GAK YE+SEDPI+ LE++IPIDT YYLENQ+S
Sbjct: 835 ADRMMKRDPGSAPRMGDRIPFVMCDVGNGAKGYEKSEDPIWALEHSIPIDTKYYLENQLS 894
Query: 880 KPLLRIFEPIL-KNASKELLSGDHT-------RSISISTPSNSG-IMKFAKRQLSCIGCK 930
PL R+F PI+ + K LL G HT I S + G + F K C+ +
Sbjct: 895 GPLNRLFGPIIGEEKVKGLLEGKHTLDKRKTPMRIDESEKAKKGSLFAFVKVSKKCVCGR 954
Query: 931 ALISNGT--LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRD 988
A +++G CS C R E+Y + ++ ++ E F +LWT CQ CQ SL + +C+SRD
Sbjct: 955 AAVADGKKPTCSQCDSRIREVYQEKMNLIRYTEEEFSKLWTYCQRCQNSLTNENICSSRD 1014
Query: 989 CPIFYRRKKAQKDMAEAKLQLDRWN 1013
CPIFYRRKK Q ++ + L R++
Sbjct: 1015 CPIFYRRKKVQLELEDTHKLLARFD 1039
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/331 (37%), Positives = 177/331 (53%), Gaps = 12/331 (3%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDS-NRELLPLSSGSAAIIRIFGVTREGHSVC 133
W RP + + F +D+DY I + N + G A++ I G EGHS+
Sbjct: 24 WKRPQIVGK-----PGLDFCLIDLDYRIQSTPNFKYDTRKEGEVAVVDIHGCDNEGHSIL 78
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
C VHG PYFY S P + + L + N+ + V V E V+KR+I
Sbjct: 79 CHVHGVIPYFYTSIPYNFTAEGLEELKNKLNSALSPFNKGNLV---VYSCEFVEKRNIYG 135
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCN 252
+ ++ ++K+ LP VASCR +L+ IQL SF T+ESNV F +R+M D
Sbjct: 136 FTKEAKSRYVKVCTTLPKHVASCRRVLESNQIQLSCSPSYSFQTFESNVDFIIRYMDDVG 195
Query: 253 IVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIE 310
I G +W+++ Y R+ S Q E DC Y+ II E E+ K+ P RILSFDIE
Sbjct: 196 ITGCSWLKLEAQNYDIRRVNDRRSINQFEIDCNYNSIIPLGTECEYMKIPPMRILSFDIE 255
Query: 311 CAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVL 370
G +FP +DPVIQ+ V +QGE+ L +C PIVG + FE E+D+L
Sbjct: 256 VGGSPENFPTADNDPVIQICCYVAVQGEEHSRFSAAFILNTCTPIVGSALFQFENEKDLL 315
Query: 371 LAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ ++ FI+ VDP+++ GYNIC FD+PYL+E+
Sbjct: 316 INFQRFIQWVDPEIITGYNICGFDIPYLVER 346
>gi|85014201|ref|XP_955596.1| DNA polymerase delta catalytic subunit [Encephalitozoon cuniculi
GB-M1]
gi|19171290|emb|CAD27015.1| DNA POLYMERASE DELTA CATALYTIC (LARGE) CHAIN [Encephalitozoon
cuniculi GB-M1]
gi|449329935|gb|AGE96202.1| DNA polymerase delta catalytic large chain [Encephalitozoon cuniculi]
Length = 974
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 315/617 (51%), Positives = 427/617 (69%), Gaps = 11/617 (1%)
Query: 388 YNICKFDLPYLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFN 446
Y++ + +L E KEDV +S I +LQ+ N +TRRR+A YCL+D LP RL + L + N
Sbjct: 354 YSLNSVSIHFLKEQKEDVPYSSIGELQSKNKDTRRRIASYCLRDTVLPLRLFNTLNVLIN 413
Query: 447 YVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEA 506
Y E++RVTG PI + +RG +IK+ + + R A +++ +IP++ S + T+EG V+E
Sbjct: 414 YTELSRVTGTPIEYFFTRGMAIKIFTLVYRAASKEDFMIPDIDPFESNK-TFEGGFVIEP 472
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKS 566
R GFY KP++ +DF+SLYPSIM+++NLCY+TL+T E R L KTP+G F +
Sbjct: 473 RKGFYNKPVSVMDFSSLYPSIMISHNLCYTTLLTKEQYRILG-----GTKTPTGNYFCSA 527
Query: 567 NLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG 626
+KG+LP IL +LL +RKR K +L+ KD +A L+GRQLA K+ ANS+YGFTGA+ G
Sbjct: 528 ERKKGLLPRILTDLLTSRKRIKEELEREKDSALRACLNGRQLAFKLCANSLYGFTGASRG 587
Query: 627 QLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVE 686
+LPC EIS SVT +GR+MI TKKL+E+ F+ GY H++ VIYGDTDSVMV F +E
Sbjct: 588 KLPCFEISQSVTGFGREMIILTKKLIEENFSRKNGYTHDSVVIYGDTDSVMVDFDEQDIE 647
Query: 687 AAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIE 746
K+ +E +++I+ F+KP+ LEFEKVYYPYLLI+KKRYAGL ++NPE K+DT+GIE
Sbjct: 648 KVFKMSKEISEFITSKFVKPVSLEFEKVYYPYLLINKKRYAGLLYSNPENPSKIDTRGIE 707
Query: 747 TVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKT 806
TVRRDNC LVK +V L IL +++ A Q+VK + DL + R DLSLLVI+K LTK
Sbjct: 708 TVRRDNCRLVKEVVETVLEMILYQKNVEKAKQFVKDAVRDLYLGRTDLSLLVISKSLTKA 767
Query: 807 GDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNI 866
GD YE K AHV+LAE++RKRD +TAP +GDRVPYVI++ KGA A+E+SEDP+YVLENN+
Sbjct: 768 GDKYESKQAHVQLAEKLRKRDESTAPVLGDRVPYVIVRKEKGAAAHEKSEDPVYVLENNL 827
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSC 926
PIDT YY+ QISKPL RIFEPI+ N +EL GDHTR I+ ST + F K +C
Sbjct: 828 PIDTEYYISQQISKPLSRIFEPIMDNV-QELFRGDHTR-IAASTGLKGPMNTFLKPTDTC 885
Query: 927 IGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTS 986
+GC+A +C +C K +V++ + W +CQ CQGS+H VLC +
Sbjct: 886 VGCRA--EGRIICINCVKDFHVHLQKMQREVEDKKEKLNSCWVECQRCQGSIHNQVLCVN 943
Query: 987 RDCPIFYRRKKAQKDMA 1003
RDCPIFY R K +K++
Sbjct: 944 RDCPIFYMRTKVKKELV 960
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 162/314 (51%), Gaps = 23/314 (7%)
Query: 91 IMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQG 150
I+F Q ID+ + DS S S + IFG T+ G V F PYFY+ G
Sbjct: 5 IVFCQTHIDFYMDDSGL------SYSCPVFSIFGNTKSGRPVRVLARNFFPYFYVEPSNG 58
Query: 151 MGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALP 210
+ E ++E+ + V + +E V K+SI+ Y + K++ + ++ + P
Sbjct: 59 ---------KEYKEEDIKESVQRLDVKATILEVEAVMKQSILGYTEGKTRVY-RLTLNTP 108
Query: 211 TMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA 270
+ + + +L+ GI + G ++ F YESN F LRFM D IVG +++ V +Y
Sbjct: 109 HVSTALKVLLESGISVKGEKVR-FRVYESNFPFVLRFMCDLGIVGMSYLRV--NRY---- 161
Query: 271 KTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVA 330
+ L L Y + S EG + + P ++LS DIEC FP DP+IQ+
Sbjct: 162 EILDADHLTVSASYESLESLPLEGGYVVLPPLKVLSIDIECVSAGNGFPSSKCDPIIQIG 221
Query: 331 NLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNI 390
N + L G+ +++ LK I GV+V +ETE+++L +W+ + E+DPDV++GYN+
Sbjct: 222 NTLMLFGDNSYASQDIFCLKETTGIPGVNVHWYETEKELLESWKKYFMELDPDVIVGYNV 281
Query: 391 CKFDLPYLIEKEDV 404
FD+PY++ + ++
Sbjct: 282 KGFDIPYILSRGEI 295
>gi|444728684|gb|ELW69130.1| DNA polymerase delta catalytic subunit [Tupaia chinensis]
Length = 544
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 323/543 (59%), Positives = 403/543 (74%), Gaps = 16/543 (2%)
Query: 480 QKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
++ L++P VK G E Y GATV+E G+Y+ PIATLDF+SLYPSIMMA+NLCY+TL+
Sbjct: 2 REGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL 59
Query: 540 TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE 599
P A+KL L + KTP+G+ FVK++++KG+LP+ILE LL+ARKRAKA+L + DPL
Sbjct: 60 RPGAAQKLGLTADQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLR 119
Query: 600 KAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTV 659
+ VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT +GRQMIE TK+LVE K+T
Sbjct: 120 RQVLDGRQLALKVSANSVYGFTGAQVGRLPCLEISQSVTGFGRQMIEKTKQLVEAKYTVG 179
Query: 660 GGYEHNAEV------IYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
GY +A+V Y D +FGV +V AM LGREAAD++SG F PI+LEFEK
Sbjct: 180 NGYSADAKVRGCPATPYDGPD----RFGVSSVAEAMALGREAADWVSGHFPPPIRLEFEK 235
Query: 714 VYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV NLVT L +L+DRD
Sbjct: 236 VYFPYLLISKKRYAGLLFSSRPDTHDRMDCKGLEAVRRDNCPLVANLVTASLRHLLIDRD 295
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAP 832
GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVELAERMRKRD +AP
Sbjct: 296 PAGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVELAERMRKRDPGSAP 355
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKN 892
++GDRVPYVII AAKG AY +SEDP++VLE+++PIDT YYLE Q+++PLLRIFEPIL
Sbjct: 356 SLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQLAQPLLRIFEPILGE 415
Query: 893 ASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAELY 950
E LL GDHTR ++ T G++ FAKR+ CIG A G +C C+ RE+ELY
Sbjct: 416 GRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRTCCIGWGA-SHQGAVCQFCQPRESELY 474
Query: 951 CKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
K VS + LE F RLWTQCQ CQGSLH+DV+CTSRDCPIFY RKK +KD+ + + L
Sbjct: 475 QKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVRKDLEDQEQLLR 534
Query: 1011 RWN 1013
R+
Sbjct: 535 RFG 537
>gi|396082048|gb|AFN83661.1| DNA polymerase catalytic subunit delta [Encephalitozoon romaleae
SJ-2008]
Length = 959
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 314/615 (51%), Positives = 424/615 (68%), Gaps = 16/615 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV S I +LQ+ + +TRRR+A YCL+D LP RL L + NY E++RVTGVPI
Sbjct: 352 QKEDVPPSSIGELQSKDKDTRRRIASYCLRDTVLPLRLFSTLNVLINYTELSRVTGVPIE 411
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+ +RG +IK+ + + R A +++ ++P + S + ++EG V+E + GFY KP++ +D
Sbjct: 412 YFFTRGTAIKIFALIYRTAAKEDFIVPEIDPFESNK-SFEGGFVIEPKRGFYNKPVSVMD 470
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIM++ NLCY+TL+T E R L KTP+ F + +KG+LP IL +
Sbjct: 471 FSSLYPSIMISNNLCYTTLLTKEQYRVLGGI-----KTPTDNYFCSAETKKGLLPRILID 525
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL +RKR K +LK+ KDP KA L+GRQLA+K+ ANS+YGFTGA+ G+LPC EIS SVT
Sbjct: 526 LLDSRKRIKEELKKEKDPALKACLNGRQLAVKLCANSLYGFTGASKGRLPCFEISQSVTG 585
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MI TK L+E+ F+ GY H++ VIYGDTDSVM+ F + ++ +E + +I
Sbjct: 586 FGREMINFTKNLIEENFSKKNGYTHDSVVIYGDTDSVMIDFNEEDIGKVFEMSKEISRFI 645
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ F+KP+ LEFEKVYYPYLLI+KKRYAGL ++NP+ K+DT+GIETVRRDNC LVK +
Sbjct: 646 TTKFVKPVSLEFEKVYYPYLLINKKRYAGLLYSNPDSPSKIDTRGIETVRRDNCGLVKEV 705
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
V L IL R++ A ++VKS + DL + R+DLSLLVI+K LTKTGD Y K AHVEL
Sbjct: 706 VETVLEMILYQRNVEKAKRFVKSVVGDLYLGRIDLSLLVISKSLTKTGDKYGSKQAHVEL 765
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AE++RKRD +TAP +GDRVPYVI+K KG AYE+SEDP+YVLENN+PIDT YY+E Q+S
Sbjct: 766 AEKLRKRDESTAPVLGDRVPYVIVKKGKGMAAYEKSEDPVYVLENNLPIDTEYYIEQQLS 825
Query: 880 KPLLRIFEPILKNASKELLSGDHTR---SISISTPSNSGIMKFAKRQLSCIGCKALISNG 936
KPL RIF+PI+ N EL GDHTR SIS+ P N+ F K CIGCKA
Sbjct: 826 KPLKRIFDPIMDNV-HELFKGDHTRVTSSISLKGPINT----FLKLADVCIGCKA--EGK 878
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
+C +C + K +V++ + W +CQ CQGS+H VLC +RDCPIFY R
Sbjct: 879 IICGNCVKDFHVYFQKMQQEVEDKKEKLNGCWVECQRCQGSIHSQVLCVNRDCPIFYMRT 938
Query: 997 KAQKDMAEAKLQLDR 1011
K +K++A +L +
Sbjct: 939 KVKKELAPLNEKLKK 953
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 150/286 (52%), Gaps = 17/286 (5%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+ IFG + G + V F PYFYI P + + + ++E+ + +
Sbjct: 12 VFSIFGNMKSGKPIQVLVRNFFPYFYIE------PANDKEYRK---EDIKESIQRLDIKA 62
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V +E V K++I+ Y + K + F K+ + A+ R L+ GI + ++ F YE
Sbjct: 63 TVLEVEPVMKQTILGYTEGKKR-FYKVTLNTSHSSAALRAFLESGISIRSEKVR-FRVYE 120
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
S F LRFM D IVG ++++V K+ + LS L Y + + P GE++
Sbjct: 121 SGFPFVLRFMCDLGIVGMSYLKV------KSYEVLSTEHLTLSTSYEFLETLPPAGEYAI 174
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGV 358
+ P +ILS DIEC FP DP+IQ+ N + L G + +++ LK I G
Sbjct: 175 LPPLKILSIDIECISAGNSFPSSKSDPIIQIGNTLMLLGSDKHVSQDIFCLKETTGIPGA 234
Query: 359 DVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
+V +++E+++L +W+ + E+DPD+++GYNI FD+PY++++ +V
Sbjct: 235 NVYWYDSEKELLESWKKYFMEIDPDIIVGYNIKGFDIPYILDRGEV 280
>gi|401882228|gb|EJT46496.1| hypothetical protein A1Q1_04928 [Trichosporon asahii var. asahii
CBS 2479]
Length = 912
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 313/532 (58%), Positives = 392/532 (73%), Gaps = 57/532 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++LQNG A++RRRLAVYCLK RLLD+LM + NY E+ARVTG+P +
Sbjct: 422 QKEDVHHSIITELQNGTADSRRRLAVYCLK------RLLDRLMCLVNYTELARVTGIPFN 475
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+RGQ I+V+SQL R AK K +IP ++ G+++ YEGATV+E G+Y+ PIATLD
Sbjct: 476 DVLTRGQQIRVISQLYRNAKDKGYLIPAMRSEGTDE-QYEGATVIEPSKGYYDTPIATLD 534
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+NLCY+TLV ++L L E +TP+ + F+ +KG+LP +LE
Sbjct: 535 FASLYPSIMMAHNLCYTTLVDKATIQRLGLVENEDYVQTPNNDFFMTEKRRKGLLPHVLE 594
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL ARKRAKADLK KDP ++AVLDGRQLALKISANSVYGFTGAT+G+LPC+ IS+SVT
Sbjct: 595 NLLGARKRAKADLKVEKDPFKRAVLDGRQLALKISANSVYGFTGATIGKLPCLAISTSVT 654
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMI+ TK+ VE +++ GY+H+A+VIYGDTDSVMV+FG P + AM+LG EAAD
Sbjct: 655 AYGRQMIDMTKREVEAQYSIQNGYDHDAQVIYGDTDSVMVKFGCPDLPTAMRLGAEAADL 714
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F KPIKLEFEKVY+PYLLISKKRYAGLYWT P+K+DKMDTKGIE
Sbjct: 715 VSAKFKKPIKLEFEKVYFPYLLISKKRYAGLYWTRPDKYDKMDTKGIE------------ 762
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
TI+DLL N++D+S LVITK L K
Sbjct: 763 -----------------------QTIADLLQNKIDMSQLVITKALAKL------------ 787
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
ERM+KRDA +AP +GDRV YVI+K KGA AYE+SEDP+YVLENN+PIDT YYLENQ+
Sbjct: 788 --ERMKKRDAGSAPALGDRVAYVIVKGIKGAAAYEKSEDPLYVLENNVPIDTRYYLENQL 845
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK 930
SKPL+RIFEPIL + + LLSG+HTRSI I+TP+ G+MKFA + +C+GC+
Sbjct: 846 SKPLMRIFEPILGSRANSLLSGEHTRSIQIATPTVGGLMKFAVKTATCLGCR 897
Score = 242 bits (617), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 172/292 (58%), Gaps = 20/292 (6%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQF 179
+R+FGVT+ G+S+ VHGF PYFY++ P G D++ L N S
Sbjct: 72 LRLFGVTKGGNSMLAHVHGFRPYFYVAAPSGFLQSDLTPLKDTL-------NTGSLA--- 121
Query: 180 VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCR------GILDRGIQ--LDGLGM 231
V E+ ++S+ Y+ + PF+KIV P + + G++ G +
Sbjct: 122 VADCEIANRKSLWGYRGDDNVPFIKIVCTEPKALPKVKDRSPASGLVQPGDDDVRKQHSV 181
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIIS 289
S + L D +VG NW+EVP GKY + ++ S CQLEF YSD++S
Sbjct: 182 SSSLHDRHQGTRVLDAAADVQLVGMNWVEVPAGKYSVLRGSEKRSRCQLEFTMHYSDLVS 241
Query: 290 RHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTL 349
PEG++ +AP R+LSFDIECAGRKG FPE DPVIQ+A +V GEK+PF+RNV TL
Sbjct: 242 HAPEGDWLTIAPLRVLSFDIECAGRKGIFPEANIDPVIQIAAMVMRHGEKKPFVRNVFTL 301
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+CA IVG V F ER +LLAWRDF++EVDPD++IGYNI FDLPYL+++
Sbjct: 302 NTCAHIVGAQVKQFMDERQLLLAWRDFVQEVDPDLVIGYNISNFDLPYLLDR 353
>gi|406701433|gb|EKD04579.1| hypothetical protein A1Q2_01151 [Trichosporon asahii var. asahii
CBS 8904]
Length = 912
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 313/532 (58%), Positives = 392/532 (73%), Gaps = 57/532 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII++LQNG A++RRRLAVYCLK RLLD+LM + NY E+ARVTG+P +
Sbjct: 422 QKEDVHHSIITELQNGTADSRRRLAVYCLK------RLLDRLMCLVNYTELARVTGIPFN 475
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+RGQ I+V+SQL R AK K +IP ++ G+++ YEGATV+E G+Y+ PIATLD
Sbjct: 476 DVLTRGQQIRVISQLYRNAKDKGYLIPAMRSEGTDE-QYEGATVIEPSKGYYDTPIATLD 534
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+NLCY+TLV ++L L E +TP+ + F+ +KG+LP +LE
Sbjct: 535 FASLYPSIMMAHNLCYTTLVDKATIQRLGLVENEDYVQTPNNDFFMTEKRRKGLLPHVLE 594
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
LL ARKRAKADLK KDP ++AVLDGRQLALKISANSVYGFTGAT+G+LPC+ IS+SVT
Sbjct: 595 NLLGARKRAKADLKVEKDPFKRAVLDGRQLALKISANSVYGFTGATIGKLPCLAISTSVT 654
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGRQMI+ TK+ VE +++ GY+H+A+VIYGDTDSVMV+FG P + AM+LG EAAD
Sbjct: 655 AYGRQMIDMTKREVEAQYSIQNGYDHDAQVIYGDTDSVMVKFGCPDLPTAMRLGAEAADL 714
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F KPIKLEFEKVY+PYLLISKKRYAGLYWT P+K+DKMDTKGIE
Sbjct: 715 VSAKFKKPIKLEFEKVYFPYLLISKKRYAGLYWTRPDKYDKMDTKGIE------------ 762
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
TI+DLL N++D+S LVITK L K
Sbjct: 763 -----------------------QTIADLLQNKIDMSQLVITKALAKL------------ 787
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
ERM+KRDA +AP +GDRV YVI+K KGA AYE+SEDP+YVLENN+PIDT YYLENQ+
Sbjct: 788 --ERMKKRDAGSAPALGDRVAYVIVKGIKGAAAYEKSEDPLYVLENNVPIDTRYYLENQL 845
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK 930
SKPL+RIFEPIL + + LLSG+HTRSI I+TP+ G+MKFA + +C+GC+
Sbjct: 846 SKPLMRIFEPILGSRANSLLSGEHTRSIQIATPTVGGLMKFAVKTATCLGCR 897
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 173/292 (59%), Gaps = 20/292 (6%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQF 179
+R+FGVT+ G+S+ VHGF PYFY++ P G D++ L N S
Sbjct: 72 LRLFGVTKGGNSMLAHVHGFRPYFYVAAPSGFLQSDLTPLKDTL-------NTGSLA--- 121
Query: 180 VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCR------GILDRGIQ--LDGLGM 231
V E+ ++S+ Y+ + PF+KIV P + + G++ G +
Sbjct: 122 VADCEIANRKSLWGYRGDDNVPFIKIVCTEPKALPKVKDRSPASGLVQPGDDDVRKQHSV 181
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIIS 289
S + L D +VG NW+EVP GKY + ++ S CQLEF YSD++S
Sbjct: 182 SSSLHDRHQGTRVLDAAADVQLVGMNWVEVPAGKYSVLRGSEKRSRCQLEFTMHYSDLVS 241
Query: 290 RHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTL 349
PEG++ +AP R+LSFDIECAGRKG FPE DPVIQ+A +VT GEK+PF+RNV TL
Sbjct: 242 HAPEGDWLTIAPLRVLSFDIECAGRKGIFPEANIDPVIQIAAMVTRHGEKKPFVRNVFTL 301
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+CA IVG V F ER +LLAWRDF++EVDPD++IGYNI FDLPYL+++
Sbjct: 302 NTCAHIVGAQVKQFMDERQLLLAWRDFVQEVDPDLVIGYNISNFDLPYLLDR 353
>gi|300707422|ref|XP_002995919.1| hypothetical protein NCER_101069 [Nosema ceranae BRL01]
gi|239605160|gb|EEQ82248.1| hypothetical protein NCER_101069 [Nosema ceranae BRL01]
Length = 977
Score = 620 bits (1600), Expect = e-174, Method: Compositional matrix adjust.
Identities = 303/617 (49%), Positives = 416/617 (67%), Gaps = 10/617 (1%)
Query: 387 GYNICKFDLPYLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIF 445
Y++ L +L E KEDV H+ + DLQ GN +TR+R+A YCLKD LP RL +KL +
Sbjct: 355 SYSLNSVSLHFLQEQKEDVPHNSMHDLQEGNKDTRKRIASYCLKDTILPLRLFNKLNILI 414
Query: 446 NYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLE 505
NY E+ARV GVP+ + SRG IKVL+ + R A + + +IP V TYEG V++
Sbjct: 415 NYTELARVMGVPLEYFSSRGVGIKVLTLIYRAAAENDYLIP-VLDVEDNDSTYEGGFVMD 473
Query: 506 ARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVK 565
GFY +PIA LDF+SLYPSIM++ NLCYSTL+T E K KTP+ FV
Sbjct: 474 PMRGFYPQPIAVLDFSSLYPSIMISRNLCYSTLLTKEQYDKFG-----GTKTPTNNYFVD 528
Query: 566 SNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV 625
S +++G+LP++L LLA+RK K ++ DP KA L+ RQ A+K+ ANS+YGFTGA
Sbjct: 529 SKVKQGLLPKVLINLLASRKATKKEMNAESDPGIKACLNARQTAIKVCANSIYGFTGANT 588
Query: 626 GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTV 685
G+LPC+EIS S TS+GR+MI TK ++E F GY H++ VIYGDTDSVM+ F +
Sbjct: 589 GKLPCVEISQSTTSFGREMIAFTKNIIESTFCKEKGYSHDSIVIYGDTDSVMINFKENDM 648
Query: 686 EAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGI 745
+ ++ E +++++ FIKP+ LEFEKVYYPYLLI+KKRYAGL + NP K+DTKGI
Sbjct: 649 KRVFEMASEISEFVTTKFIKPVSLEFEKVYYPYLLINKKRYAGLIYNNPNTPSKIDTKGI 708
Query: 746 ETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTK 805
ETVRRDNC LVK ++ CL+KIL D+D+ GA YVK + DL ++DLS LVI+K +TK
Sbjct: 709 ETVRRDNCNLVKEVIETCLNKILYDKDVEGAKTYVKKIVQDLYQGKIDLSQLVISKSITK 768
Query: 806 TGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 865
GD Y K AHVELAE+MRKR +A +G+RV Y++++ K Y+++EDP+YVLE+N
Sbjct: 769 AGDKYASKQAHVELAEKMRKRGDESAGALGNRVAYIMVEKGKKVAGYDKAEDPVYVLEHN 828
Query: 866 IPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLS 925
+PIDT YY+E Q++KPL R+FEPI+ N S ELL G+HTR ++ + + F + +++
Sbjct: 829 LPIDTEYYIEQQLAKPLHRLFEPIVDNVS-ELLKGEHTRVVTNIVKAKGPMNAFLQAKVT 887
Query: 926 CIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCT 985
C+GCKA S LC C+ + K + V+ + LF WT+CQ CQGSL ++LC
Sbjct: 888 CVGCKA--SGTILCKSCQPDFYKHLIKLQTDVENKKKLFNECWTECQRCQGSLQDEILCA 945
Query: 986 SRDCPIFYRRKKAQKDM 1002
+RDCPIFY R + +K++
Sbjct: 946 NRDCPIFYMRTRVKKEL 962
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 162/312 (51%), Gaps = 24/312 (7%)
Query: 91 IMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQG 150
I+F Q DIDY++ +N + S II IFG ++G V V F PYFYI Q
Sbjct: 6 IVFLQTDIDYILDTTNLNV------SEPIITIFGTMKDGSPVQLLVKDFNPYFYI---QP 56
Query: 151 MGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALP 210
+G I E +REA + + ++ K + Y + KS F K+ P
Sbjct: 57 VGD------QNIFEDEIREAIDKLSIKGKLLNVSTSMKYPLYGYSESKSL-FYKLTFNTP 109
Query: 211 TMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA 270
++ + IL+ GI + ++ F +ESN F LRFM+D NIVG ++++ K
Sbjct: 110 SVFYQIKPILEAGILIKNRLVR-FKLFESNFPFVLRFMVDMNIVGMQYLKI------KRY 162
Query: 271 KTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAG-RKGHFPEPTHDPVIQV 329
LS C Y D++ + E+ K+ F+ILS DIEC K FP T DP+IQ+
Sbjct: 163 IVLSSNPFVISCSYVDVVPLEIKNEYVKLPKFKILSIDIECISLDKISFPVATKDPIIQI 222
Query: 330 ANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYN 389
N V+ + + + LK A I G V SF T++D+L+AW+++ + +PD+++GYN
Sbjct: 223 GNTVSYSDDPSKIEQVIFCLKETAAIPGAIVRSFNTKKDLLIAWKEYFIDQNPDLILGYN 282
Query: 390 ICKFDLPYLIEK 401
+ FD+PY++E+
Sbjct: 283 LKGFDIPYILER 294
>gi|341875870|gb|EGT31805.1| hypothetical protein CAEBREN_32455 [Caenorhabditis brenneri]
Length = 1017
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 318/575 (55%), Positives = 409/575 (71%), Gaps = 42/575 (7%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H+II DLQ G+ +TRRRLA YCLKDAYLP RLLDKLM I NY+EMARVTGVP++
Sbjct: 458 QKEDVEHNIIPDLQRGDEQTRRRLAQYCLKDAYLPLRLLDKLMSIINYIEMARVTGVPMN 517
Query: 460 FLLSRGQSIKV----------------LSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATV 503
FLL++GQ IKV LS +LR+ KQ N +P ++ + YEGATV
Sbjct: 518 FLLTKGQQIKVFLNPDFSHHFVFALQILSMMLRRCKQNNFFLPVIEANSGDGEGYEGATV 577
Query: 504 LEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETF 563
++ GFY +PIATLDFASLYPSIM+A+NLCY+TL+ + E +TPSG+ F
Sbjct: 578 IDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLLKAPQG----IENEDYIRTPSGQYF 633
Query: 564 VKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGA 623
+ ++G+LPEILE++LAARKRAK D+K KD ++ V +GRQLALKISANSVYGFTGA
Sbjct: 634 ATKSKRRGLLPEILEDILAARKRAKNDMKNEKDEFKRMVYNGRQLALKISANSVYGFTGA 693
Query: 624 TVGQLPCIEISSSVTSYGRQMIEHTKKLVE---DKFTTVGGYEHNAEVIYGDTDSVMVQF 680
TVG+LPC+EIS SVT++GR+MI+ TK VE K G +A+VIYGDTDSVMV+F
Sbjct: 694 TVGKLPCLEISQSVTAFGRKMIDMTKSEVERIYKKGALDGKCPADAKVIYGDTDSVMVKF 753
Query: 681 GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM 740
GV TV AM++G +AA EKVY PYLLI+KKRYAGLY+T P+ DKM
Sbjct: 754 GVETVAQAMEIGLDAAK--------------EKVYSPYLLINKKRYAGLYFTKPDVHDKM 799
Query: 741 DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVIT 800
D KG+ETVRRDNC LV ++ CL K+L+DRD A+ + K TISDLL N++D+SLL+I+
Sbjct: 800 DCKGLETVRRDNCPLVAKVLGVCLEKLLIDRDQQSALDFAKRTISDLLCNKIDISLLIIS 859
Query: 801 KGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIY 860
K LTK+GD Y+ K AHVELA RM+KRDA +AP +GDRVPYV I AAK AYER+EDP +
Sbjct: 860 KELTKSGDKYQAKQAHVELAARMKKRDAGSAPRLGDRVPYVFIAAAKNVPAYERAEDPTF 919
Query: 861 VLENNIPIDTHYYLENQISKPLLRIFEPILKN-ASKELLSGDHTRSISISTPSNSGIMKF 919
VL+NNIP+DT +YL NQ++KPL RIFEPIL + A K L+ G+HTR ++ G+ F
Sbjct: 920 VLQNNIPLDTKHYLTNQLAKPLARIFEPILGDRAEKILVEGEHTRVRTVVQSKVGGLAVF 979
Query: 920 AKRQLSCIGCKALI----SNGTLCSHCKGREAELY 950
K+ +C+GCK+++ S +C HC+ + E++
Sbjct: 980 TKKSATCLGCKSVLPKMESENAVCKHCEPKLPEIF 1014
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 192/346 (55%), Gaps = 23/346 (6%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
WARPP+ + ++I Q L+++ D + +S ++++GVT+ G+S+C
Sbjct: 47 WARPPVDK-EIGVTKNIACQVLEVETYHEDGS-----ATSYDRTNVKLYGVTKAGNSICV 100
Query: 135 KVHGFEPYFYIS---CPQGMGPDDISHFHQILEGRMREANRN---------SKVPQFVRH 182
V + P+FY PQG G + I L + A R KV + H
Sbjct: 101 IVTEYFPHFYFQHFQAPQGFGVEHIGTAQTALCNMVAAAKRRIGSGQSQLPGKVVDNLVH 160
Query: 183 IEMVQKRSIMYYQQQKSQ-PFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMT-YESN 240
IE+V+ ++ Y++ ++ PF+K+ + + R L G+ L G G + YESN
Sbjct: 161 IELVRGENLYYFRGADTKVPFVKVTGSQEAL-NKARQELKNGVNLMGKGPVNIGNLYESN 219
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
+ + F+ + NIVG WIE+P GK R + S CQ+E +II +GE++
Sbjct: 220 INPVVMFLANTNIVGCGWIELPAGKCRILSGGEKSSRCQIEVIVDVKNIIVHESDGEWAG 279
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGV 358
+AP R LS DIEC GR+G FPE DP+IQ+ANLV ++GE +PF+RN L +CAP+VG
Sbjct: 280 IAPIRTLSLDIECIGRRGVFPEAIKDPIIQIANLVKIEGESEPFVRNCFVLGTCAPVVGS 339
Query: 359 DVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
+++ E+ +L W +F+REVDPD++ GYNI FDLPY++++ V
Sbjct: 340 NIIQCVNEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKV 385
>gi|156086780|ref|XP_001610797.1| DNA polymerase delta subunit [Babesia bovis T2Bo]
gi|154798050|gb|EDO07229.1| DNA polymerase delta subunit [Babesia bovis]
Length = 1065
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 310/608 (50%), Positives = 432/608 (71%), Gaps = 13/608 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS +S LQ G+A RRR+A YCLKD+ LP L+DKL+ +FNYVEMARVT PI
Sbjct: 447 QKEDVHHSTMSKLQLGSAADRRRIASYCLKDSVLPLLLIDKLLLLFNYVEMARVTSTPIK 506
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV---KQAGSEQGTYEGATVLEARAGFYEKPIA 516
L+SRGQ I+V Q+ R+ K +P+V ++A + + +YEGATVLE + G++ IA
Sbjct: 507 MLISRGQQIRVTMQIYRQCKLMGYAVPSVNAAQRAANSEASYEGATVLEPKKGYHRNAIA 566
Query: 517 TLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPS--GETFVKSNLQKGILP 574
LDF SLYPSIM+A+NLCYSTLV P DA K P E + P G F+K++++KG+LP
Sbjct: 567 VLDFQSLYPSIMIAHNLCYSTLVPPADASKY--PAEDLTTVPGHPGLYFIKAHVRKGMLP 624
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGA-TVGQLPCIEI 633
I+E L+ ARK+AK ++K DP+ ++VLDGRQLALKI+ NSVYG+TGA T G LPC+E+
Sbjct: 625 LIVERLIEARKKAKEEMKVCTDPMLRSVLDGRQLALKITTNSVYGYTGASTSGFLPCVEV 684
Query: 634 SSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR 693
++++TS+GR MI TK+ +E FT GY+ +A V+YGDTDSVM+ FG + A++LG
Sbjct: 685 ATAITSFGRYMIVDTKEKIESHFTKANGYDTDASVVYGDTDSVMINFGTKDISRAIELGV 744
Query: 694 EAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNC 753
+AA I+ IKPI L FEKVY P LL++KKRYAGLY+T +K+DK+D KGIETVRRD C
Sbjct: 745 QAAAMITNQAIKPITLLFEKVYLPLLLLAKKRYAGLYYTKADKYDKIDCKGIETVRRDFC 804
Query: 754 LLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVK 813
LLV+ ++ LH +LVD D+ GA+++VKS IS LL N +D+SLLV+TK L K DY+ +
Sbjct: 805 LLVQQMMERILHMLLVDLDLNGAIEFVKSRISQLLRNEIDISLLVVTKSLGKV--DYDAR 862
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
HVELA+++R+RD AP+VGDRV Y+I+K K ++R+E+P+YV+ENNIP+DT +Y
Sbjct: 863 LPHVELAKKLRQRDPGKAPSVGDRVSYLIVKGTKNQPQFDRAEEPLYVVENNIPVDTQHY 922
Query: 874 LENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI 933
L+ I L+RIFE I+ N + L SG+HTR +++++ S + F K+ C+GCK +I
Sbjct: 923 LD-AIKSTLMRIFEVIMPNP-ESLFSGEHTRFVTLTSSSEGALSMFMKKVERCLGCKTVI 980
Query: 934 SNGTLCSHCK-GREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
C HC + ++ + + + ++ E + LW+QCQ CQGSLH +V+C +RDCPIF
Sbjct: 981 KVPPFCDHCNLEKRQQVMLQKLEERRQKEADYFDLWSQCQRCQGSLHNEVICDNRDCPIF 1040
Query: 993 YRRKKAQK 1000
Y+R + K
Sbjct: 1041 YKRVRTGK 1048
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 127/362 (35%), Positives = 180/362 (49%), Gaps = 34/362 (9%)
Query: 67 DFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYV-----IGDSNRELLPLSSGSA---- 117
D+ + RP L + +Q + I+ Q D DY +GD E LP S+ +
Sbjct: 21 DYGELFRRCCRPTLDT---TQLEDIVMFQTDADYTSHYEKVGD---EPLPSSNNTNNVSR 74
Query: 118 ----AIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
IIR++GVTRE HSV VH F YFY+ P + I + E
Sbjct: 75 MVELPIIRLYGVTRESHSVLVNVHNFMSYFYVEKPVNFKKEHIPLLIDFFNKHLMELPPF 134
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQ---LDGLG 230
K ++V I++VQ +M Y+ +LK++ LP MV+S R ++ GI LDG
Sbjct: 135 KKTCRYVIDIDIVQITPLMLYKPNAKCDYLKVITTLPRMVSSLRSFIESGISLPVLDGDN 194
Query: 231 MKSF----MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSD 286
E+N+ + LRF++D I GG WI +P G Y A S+C +E Y D
Sbjct: 195 STRIPFPRQVCEANIPYVLRFLLDGEITGGCWIRLPKGTYSIVADKTSHCSIEVSMDYKD 254
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKG-HFPEPTHDPVIQVANLVTLQGEK----QP 341
+ EGE+ + P R LSFDIEC G FP +DPVIQ+A+++ G+ Q
Sbjct: 255 LDPMPIEGEWQSIGPIRTLSFDIECVKFTGPGFPNANNDPVIQIASVLHTHGDSLDSAQK 314
Query: 342 FIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
F V TL +C + G V+SF E +L+AW+ F VDPD + GYNI FD+PYLI +
Sbjct: 315 F---VFTLDTCDNLHGAHVLSFANEAALLMAWKQFFIAVDPDFLTGYNIINFDIPYLINR 371
Query: 402 ED 403
+
Sbjct: 372 AN 373
>gi|149056046|gb|EDM07477.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_d [Rattus norvegicus]
gi|149056047|gb|EDM07478.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_d [Rattus norvegicus]
Length = 964
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 307/476 (64%), Positives = 379/476 (79%), Gaps = 9/476 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 481 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 541 YLLSRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVK++++KG+LP+ILE
Sbjct: 599 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKASVRKGLLPQILEN 658
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 659 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 718
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 719 FGRQMIEKTKQLVETKYTLENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 778
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ + D+MD KG+E VRRDNC LV N
Sbjct: 779 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDRMDCKGLEAVRRDNCPLVAN 838
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 839 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 898
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSE-DPIYVLENNIPI-DTHY 872
LAERMRKRD +APN+GDRVPYVII AAKG AY +SE P + +P+ D+H+
Sbjct: 899 LAERMRKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEVRPTWA----VPLPDSHF 950
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/334 (48%), Positives = 214/334 (64%), Gaps = 8/334 (2%)
Query: 74 KWARP-PLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGH 130
+W RP PL+ + ++FQQL+ID+ +G S E P S S I+R FGVT EG
Sbjct: 74 RWLRPTPLA--LDPSTEPLIFQQLEIDHYVGTSPPLPEGPPASRNSVPILRAFGVTDEGF 131
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC +HGF PYFY P G G + +S + L + R K V IE+ +
Sbjct: 132 SVCCHIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSGPAVLAIELCSR 191
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
S+ Y PFL+I +ALP ++A R +L++GI++ GLG SF YE+NV F +RFM
Sbjct: 192 ESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGTPSFAPYEANVDFEIRFM 251
Query: 249 IDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
+D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+LSF
Sbjct: 252 VDADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRVLSF 311
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E
Sbjct: 312 DIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEREE 371
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
D+L AW FI +DPDV+ GYNI FDLPYLI +
Sbjct: 372 DLLQAWATFILAMDPDVITGYNIQNFDLPYLISR 405
>gi|148690787|gb|EDL22734.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_f [Mus musculus]
Length = 964
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 303/458 (66%), Positives = 370/458 (80%), Gaps = 3/458 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 483 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 543 YLLTRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVKS+++KG+LP+ILE
Sbjct: 601 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILEN 660
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 661 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 720
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 721 FGRQMIEKTKQLVESKYTVENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 780
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
S F PI+LEFEKVY+PYLLISKKRYAGL +++ + DKMD KG+E VRRDNC LV N
Sbjct: 781 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDKMDCKGLEAVRRDNCPLVAN 840
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L +ILVDRD GAV + K ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 841 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE 900
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSE 856
LAERMRKRD +AP++GDRVPYVII AAKG AY +SE
Sbjct: 901 LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSE 938
Score = 325 bits (834), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 159/337 (47%), Positives = 213/337 (63%), Gaps = 14/337 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSG------SAAIIRIFGVTR 127
+W RP L + + ++FQQL+ID+ +G + PL G S I+R FGVT
Sbjct: 76 RWRRPTLRA-LDPSTEPLIFQQLEIDHYVGSAP----PLPEGPLPSRNSVPILRAFGVTD 130
Query: 128 EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEM 185
EG SVCC + GF PYFY P G G + +S Q L + R K V IE+
Sbjct: 131 EGFSVCCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIEL 190
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFAL 245
+ S+ Y PFL+I +ALP ++A R +L++G+++ GLG SF YE+NV F +
Sbjct: 191 CSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEI 250
Query: 246 RFMIDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
RFM+D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+
Sbjct: 251 RFMVDADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRV 310
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E
Sbjct: 311 LSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYE 370
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW DFI +DPDV+ GYNI FDLPYLI +
Sbjct: 371 REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISR 407
>gi|303390605|ref|XP_003073533.1| DNA polymerase catalytic subunit delta [Encephalitozoon intestinalis
ATCC 50506]
gi|303302680|gb|ADM12173.1| DNA polymerase catalytic subunit delta [Encephalitozoon intestinalis
ATCC 50506]
Length = 959
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 306/620 (49%), Positives = 427/620 (68%), Gaps = 19/620 (3%)
Query: 388 YNICKFDLPYLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFN 446
Y++ + +L E KEDV +S I +LQ+ + +TRRR+A YCL+D LP RL KL + N
Sbjct: 339 YSLNSVSIHFLKEQKEDVPYSSIGELQSKDKDTRRRIASYCLRDTVLPLRLFSKLNVLIN 398
Query: 447 YVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEA 506
Y E++RVTGVPI + +RG +IK+ + + R A ++ V+P S + YEG V+E
Sbjct: 399 YAELSRVTGVPIEYFFTRGTAIKIFALIYRTASKEGFVVPETDPFESGK-KYEGGFVIEP 457
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKS 566
+ GFY KPI+ +DF SLYPSIM+++NLCY+TL+T + R L +TP+ F
Sbjct: 458 KKGFYGKPISVMDFTSLYPSIMISHNLCYTTLLTKDQYRILGGI-----RTPTDNYFCSP 512
Query: 567 NLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG 626
+KG+LP IL +LL +RK+ K +LK+ KDP KA L+G+QLA+K+ ANS+YGFTGA+ G
Sbjct: 513 ERKKGLLPRILVDLLDSRKKIKEELKKEKDPAVKACLNGKQLAVKLCANSLYGFTGASKG 572
Query: 627 QLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVE 686
+LPC EIS SVT +GR+MI TKKL+E+ F+ GY H++ VIYGDTDSVM+ F ++
Sbjct: 573 KLPCFEISQSVTGFGREMIMLTKKLIEENFSKKNGYTHDSVVIYGDTDSVMINFDEEDIK 632
Query: 687 AAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIE 746
++ +E +++++ F+KP+ LEFEKVYYPYLLI+KKRYAGL ++NP K+DTKGIE
Sbjct: 633 KVFEMSKEISEFVTSKFMKPVSLEFEKVYYPYLLINKKRYAGLLYSNPNTASKIDTKGIE 692
Query: 747 TVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKT 806
VRRDNC LVK V L IL ++++ A Q+V+ + DL + R+DLSLLVI+K LTK+
Sbjct: 693 AVRRDNCGLVKETVETVLEMILHEKNVEKAKQFVRDVVRDLYLGRIDLSLLVISKSLTKS 752
Query: 807 GDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNI 866
G+ Y + AHVELAE++RKRD TAP +GDRVPYVI+K KG AYE+SEDP+YVLENN+
Sbjct: 753 GEKYGSRQAHVELAEKLRKRDETTAPVLGDRVPYVIVKKGKGIAAYEKSEDPVYVLENNL 812
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSI---SISTPSNSGIMKFAKRQ 923
PIDT YY+E Q+SKP+ RIFEP++ N EL GDHTR + S+ P N+ F K
Sbjct: 813 PIDTEYYIEQQLSKPMERIFEPVMDNVD-ELFKGDHTRVVQRASLKGPMNT----FLKLA 867
Query: 924 LSCIGCKALISNGTLCSHCKGREAELYCKTVSQ-VQELEVLFGRLWTQCQECQGSLHQDV 982
C+GC+A +CS+C+ ++ ++ + + Q V+ + W +CQ CQGS+H V
Sbjct: 868 DVCVGCRA--EGKIICSNCR-KDFHIHLQKMQQEVENKKERLNSCWVECQRCQGSIHNQV 924
Query: 983 LCTSRDCPIFYRRKKAQKDM 1002
LC +RDCPIFY R K +K++
Sbjct: 925 LCVNRDCPIFYMRTKVRKEL 944
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 147/286 (51%), Gaps = 17/286 (5%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+ IFG G + V F PYFYI G + E ++++ + +
Sbjct: 12 VFAIFGNIESGEPIQVLVKNFFPYFYIETVNG---------KEYKEEDIKDSIQRLDIKA 62
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V +E K++I+ Y + KS+ F K+ + P + + R L+ GI + ++ F YE
Sbjct: 63 TVVEVEATMKQTILGYTEGKSR-FYKLTLNTPHVSGALRAFLESGITIRREKVR-FRVYE 120
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
S+ F LRFM D IVG ++++V + + L L Y + P G ++
Sbjct: 121 SSFPFVLRFMCDLGIVGMSYLKV------RKYEVLDGKYLTVSTSYESLEPLPPVGVYAI 174
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGV 358
+ P ++LS DIEC FP DP+IQ+ N +T+ G + +++ LK I GV
Sbjct: 175 LPPLKVLSLDIECVSIGNAFPSSKTDPIIQIGNTLTMFGSDKYLSQDIFCLKETTGIPGV 234
Query: 359 DVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
+V +ETE+++L +W+ + E+DPD++IGYN+ FDLPY++ + +V
Sbjct: 235 NVHWYETEKELLESWKKYFMELDPDIIIGYNVKGFDLPYILGRGEV 280
>gi|401828411|ref|XP_003887919.1| DNA polymerase type-B delta catalytic subunit [Encephalitozoon hellem
ATCC 50504]
gi|392998927|gb|AFM98938.1| DNA polymerase type-B delta catalytic subunit [Encephalitozoon hellem
ATCC 50504]
Length = 974
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 305/616 (49%), Positives = 419/616 (68%), Gaps = 11/616 (1%)
Query: 388 YNICKFDLPYLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFN 446
Y++ + +L E KEDV S I +LQ+ + ++RRR+A YCL+D LP RL L + N
Sbjct: 354 YSLNSVSIHFLKEQKEDVPPSSIGELQSKDKDSRRRIASYCLRDTVLPLRLFSTLSVLIN 413
Query: 447 YVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEA 506
Y E++RVTGVPI + +RG +IK+ + + R A +++ V+P V S + T+EG V+E
Sbjct: 414 YTELSRVTGVPIDYFFTRGTAIKMFALIYRVAAKEDFVVPEVDPFESNR-TFEGGFVIEP 472
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKS 566
+ GFY KP++ +DF SLYPSIM++ NLCY+TL+T E R L +TP+ F +
Sbjct: 473 KRGFYNKPVSVMDFTSLYPSIMISNNLCYTTLLTKEQYRVLGGI-----RTPTDNYFCSA 527
Query: 567 NLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG 626
+KG+LP IL +LL +RK+ K +LK+ KDP KA L+GRQLA+K+ ANS+YGFTGA+ G
Sbjct: 528 ERKKGLLPRILVDLLESRKKIKEELKKEKDPALKACLNGRQLAVKLCANSLYGFTGASKG 587
Query: 627 QLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVE 686
+LPC EIS SVT +GR+MI TK L+E+ F+ GY H++ VIYGDTDSVM+ F +
Sbjct: 588 KLPCFEISQSVTGFGREMINFTKNLIEENFSKKNGYTHDSVVIYGDTDSVMIDFNEEDLG 647
Query: 687 AAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIE 746
++ + +++++ F++P+ LEFEKVYYPYLLI+KKRYAGL ++NP+ K+DT+GIE
Sbjct: 648 RVFEMSKRISEFVTSKFVRPVSLEFEKVYYPYLLINKKRYAGLLYSNPDSPSKIDTRGIE 707
Query: 747 TVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKT 806
TVRRDNC LVK V L IL R++ A ++VK + DL + ++DLSLLVI+K LTK
Sbjct: 708 TVRRDNCGLVKEAVETVLEMILYQRNVEKAKRFVKDVVRDLYLGKIDLSLLVISKSLTKA 767
Query: 807 GDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNI 866
GD Y + AHVELAE++RKRD +TAP +GDRVPYVI+K KG AYE+SEDP+YVLENN+
Sbjct: 768 GDKYGSRQAHVELAEKLRKRDESTAPVLGDRVPYVIVKKGKGIAAYEKSEDPVYVLENNL 827
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSC 926
PIDT YY+E Q+SKPL RIF+PI+ N EL GDHTR + ST I F K C
Sbjct: 828 PIDTEYYIEQQLSKPLKRIFDPIMDNV-HELFKGDHTRVMQ-STSLKGPINTFLKPADVC 885
Query: 927 IGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTS 986
IGC+A +CS+C + +V++ + W +CQ CQGS+H VLC +
Sbjct: 886 IGCRA--EGRIICSNCTKDFHVHLQRMQREVEDKKERLNGCWVECQRCQGSIHNQVLCVN 943
Query: 987 RDCPIFYRRKKAQKDM 1002
RDCPIFY R K +K++
Sbjct: 944 RDCPIFYMRTKVKKEL 959
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 157/316 (49%), Gaps = 23/316 (7%)
Query: 89 QSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCP 148
+ I+F Q ID+ + DS S S I I G + G + V F PYFYI
Sbjct: 3 KEIVFCQSHIDFYMDDSGL------SYSHPIFSISGNMKSGKPLQVLVRNFFPYFYIEAA 56
Query: 149 QGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVA 208
G + + ++E+ + V V +E V K++IM Y + K + F K+ +
Sbjct: 57 NG---------KEYRKEDIKESIQRLDVKATVLEVEAVMKQTIMGYTEGK-KTFYKVTLN 106
Query: 209 LPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRK 268
P A+ R L+ G+ + G ++ F YES F LRFM D IVG ++++V
Sbjct: 107 TPHASAALRAFLEGGVVIKGEKVR-FRVYESGFPFVLRFMCDLGIVGMSYLKV------N 159
Query: 269 TAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQ 328
+ + L L Y + + G ++ + P +ILS DIEC FP DP+IQ
Sbjct: 160 SYEVLDSENLTLSTSYESLETLPLTGVYAILPPLKILSIDIECVSAGNSFPSSKSDPIIQ 219
Query: 329 VANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGY 388
+ N + L G ++ + + LK I G V ++TE+ +L +W+ + EVDPD+++GY
Sbjct: 220 IGNTLMLFGNEKHESQAIFCLKETTGIPGASVHWYDTEKGLLESWKKYFMEVDPDIIVGY 279
Query: 389 NICKFDLPYLIEKEDV 404
NI FDLPY++++ ++
Sbjct: 280 NIKGFDLPYILDRGEI 295
>gi|403221257|dbj|BAM39390.1| DNA polymerase delta catalytic subunit [Theileria orientalis strain
Shintoku]
Length = 1072
Score = 600 bits (1548), Expect = e-168, Method: Compositional matrix adjust.
Identities = 305/611 (49%), Positives = 434/611 (71%), Gaps = 13/611 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+S IS LQ G + RRR+A YCLKDA LP L++KL+ +FNYVEMARVT PI
Sbjct: 453 QKEDVHYSTISKLQQGTSSDRRRIASYCLKDAILPLLLINKLLLVFNYVEMARVTSTPIK 512
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAG---SEQGTYEGATVLEARAGFYEKPIA 516
FL++RGQ I+V Q+ R+ ++ VIP + AG S + YEGATVL+ + G++ PIA
Sbjct: 513 FLITRGQQIRVTMQIYRQCRKMKYVIPVISSAGRHGSNENNYEGATVLDPQKGYHTNPIA 572
Query: 517 TLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPS--GETFVKSNLQKGILP 574
LDF SLYPSIM+AYNLCYSTLV P++ + LN P E V + P FVK+ +KGILP
Sbjct: 573 VLDFQSLYPSIMIAYNLCYSTLV-PQN-KILNHPEEDVTRIPGYIDLCFVKATKRKGILP 630
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQ-LPCIEI 633
I+E L+ AR++AK + +DP+ K V DGRQLALK++ NSVYG+TGA G LPC+++
Sbjct: 631 IIVENLIEARRKAKKMMASCQDPMLKKVYDGRQLALKVTTNSVYGYTGAASGGFLPCVDV 690
Query: 634 SSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR 693
++++TS+GR +I +TK ++ED FT GY+++A+V+YGDTDSVM+ FG ++ A+ LG
Sbjct: 691 ATAITSFGRNIILNTKNIIEDHFTVKNGYKNDAKVVYGDTDSVMINFGTEDIQEAIDLGN 750
Query: 694 EAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNC 753
EAA I+ +KPI L FEKVY P LL++KKRYAGLY+ N + ++K+D KGIETVRRD C
Sbjct: 751 EAASKITSVSVKPITLLFEKVYRPLLLLNKKRYAGLYYNNSKTYEKIDCKGIETVRRDFC 810
Query: 754 LLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVK 813
+LV+ ++ L+ +LV+ ++P A+++VK+ +S+LL N +D+SLLV+TK L K +YE +
Sbjct: 811 MLVQQMMERVLYLLLVELNLPAAIEFVKNKVSELLRNEIDISLLVVTKSLGKL--EYEQR 868
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
HVELA+++RKRD AP VGDR+ Y+I+K KG Y+R+E+P+YV ENN+PIDT++Y
Sbjct: 869 LPHVELAKKLRKRDPGKAPGVGDRISYIIVKGTKGEAQYDRAEEPLYVTENNLPIDTNHY 928
Query: 874 LENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI 933
LE+ I LLRIF+ ++ N + L SG+HTR I+IS+ + + KF K+ C+ C +I
Sbjct: 929 LES-IKTTLLRIFDVVMPNP-QSLFSGEHTRVINISSNTGGLMNKFLKKVNRCLSCNTVI 986
Query: 934 SNGTLCSHC-KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
T C +C + ++ ++ + + E + +LWT CQ CQG+LH V+C +RDCPIF
Sbjct: 987 QTSTFCDNCNQSKKQQVLLDKLKICRMKEETYFKLWTHCQRCQGNLHSAVVCDNRDCPIF 1046
Query: 993 YRRKKAQKDMA 1003
YRR K KD++
Sbjct: 1047 YRRVKTSKDLS 1057
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 183/344 (53%), Gaps = 29/344 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
IIR++GVT++ SV + F PYFYI P + ++ + E N+ + +
Sbjct: 71 IIRLYGVTKQEQSVLVSLQNFNPYFYIEKPAALLDRHFDDLKELFTRHLSEQNQFKRSLR 130
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK------ 232
+V I+ V+ S+M Y + + FLKI V++P MV++ R ++ GI L
Sbjct: 131 YVLDIQKVRLTSLMLYDENSEKDFLKITVSVPRMVSNLRTFIESGIYLKVYDQDRNEVRV 190
Query: 233 --SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSY--------------C 276
S TYE+N+ + LRF++DCNIV G+W+++P G+Y + Y C
Sbjct: 191 AFSRQTYEANLPYTLRFLLDCNIVSGSWLKIPKGQYTLVEQPSCYKVHPSKNGWDRSSTC 250
Query: 277 QLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH-FPEPTHDPVIQVANLVTL 335
+E Y +IS EGE+ ++ P +ILSFDIEC G FP +DPVIQ+++++
Sbjct: 251 SIEVVAEYDAVISLPLEGEYEEIGPIKILSFDIECIKLTGTGFPNANYDPVIQISSVIYT 310
Query: 336 QGEKQPFIRN-VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFD 394
G+ RN V TLK C + V+SFETE +LLAW DF+ +VDPD + GYNI FD
Sbjct: 311 HGKDINETRNFVFTLKDCDQLSNAAVLSFETEDQLLLAWSDFLVQVDPDFLTGYNIIVFD 370
Query: 395 LPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLL 438
LPYL+ + S + +++ TR R KDA + ++
Sbjct: 371 LPYLLTR-----STVLNIERFKKITRIRSTSSNFKDAIVSNNMM 409
>gi|399219112|emb|CCF75999.1| unnamed protein product [Babesia microti strain RI]
Length = 977
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 301/614 (49%), Positives = 430/614 (70%), Gaps = 12/614 (1%)
Query: 401 KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISF 460
K+DVH+SI+ L G E RRRLA YCLKD+ LP +L+DKL+ + NYVEMARVTG PI F
Sbjct: 365 KDDVHYSIMKSLHYGTNEERRRLANYCLKDSLLPLKLIDKLLLLINYVEMARVTGTPIKF 424
Query: 461 LLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDF 520
L++RGQ IKV Q+LR+ K NLV+P +K G E YEGA V+E G+++ PIA LD+
Sbjct: 425 LITRGQQIKVTMQILRQCKVMNLVMPCIKSNGQE-ANYEGAMVMEPIKGYHKVPIAVLDY 483
Query: 521 ASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGE--TFVKSNLQKGILPEILE 578
SLYPS+M+A+N+CYSTL+ ED K + + + P E F+K ++ KG+LP +++
Sbjct: 484 QSLYPSLMIAHNICYSTLIRSEDLHKYD--EKDFTRVPDNEGICFIKPHI-KGLLPIVVD 540
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG-QLPCIEISSSV 637
LL AR +AK ++K +DP K VL+GRQ ALKI+ANSVYG+TGA+ G LP +++++++
Sbjct: 541 NLLTARAKAKHEMKMCEDPFTKNVLNGRQYALKITANSVYGYTGASSGGWLPSVQLATAI 600
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TS+GRQ+I T +E +T GY +A+V+YGDTDSVM+ FGV TVE AMKLG EAA+
Sbjct: 601 TSFGRQLIGKTAMTIERMYTVANGYSADAKVVYGDTDSVMINFGVGTVEEAMKLGTEAAN 660
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
IS IKPIKL FEKVY+P+LL++KKRYAGL ++N +K+DK+D KGIE+VRRD C+LV+
Sbjct: 661 KISSEEIKPIKLVFEKVYFPFLLLTKKRYAGLLYSNSDKYDKIDCKGIESVRRDFCMLVQ 720
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV 817
+ LH +L+D ++ GA+ + K I DLL N +D+SLLV+TK L K DYE + HV
Sbjct: 721 QMTERVLHLLLIDINLQGAIDFTKQKIKDLLTNEIDISLLVVTKSLGK--QDYEARLPHV 778
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
ELA++M+ R+ AP VGDR+ Y+I K KG ++R+EDP+YV+EN++PIDT +YLE+
Sbjct: 779 ELAKKMKAREPTNAPGVGDRISYIITKGTKGQPQFDRAEDPLYVVENDLPIDTGHYLES- 837
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT 937
I +++ FE I+ N + L SGDHTR I+ ST + + KF + C+ C ++I
Sbjct: 838 IKSTIMKFFEVIMPNP-ESLFSGDHTRIITESTVTTGALSKFMTKSYRCMSCSSIIQTPP 896
Query: 938 LCSHC-KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK 996
LC +C + +++L + ++ ++ E F +W++CQ CQ SLH V C++ DCPIFYRR
Sbjct: 897 LCKYCAESEQSKLVLEQINSLRVKEEAFASMWSECQRCQQSLHNVVKCSNSDCPIFYRRA 956
Query: 997 KAQKDMAEAKLQLD 1010
K +KD+ + +++
Sbjct: 957 KVRKDLINIQNKIN 970
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 165/285 (57%), Gaps = 4/285 (1%)
Query: 118 AIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP 177
+I+RI+GV ++ S+ ++ F PYFYI P P I IL ++ K
Sbjct: 7 SIVRIYGVMKDHSSILLNIYNFWPYFYIKMPPNFIPHHIEKL-TILLNEYLKSQHFKKSR 65
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
FV IE+V+K+S+M+Y S FLKI VALP MV++ R ++ GI + G + M +
Sbjct: 66 LFVVKIEIVKKQSLMFYSPDNSIDFLKITVALPRMVSTLRTFIENGISIKGNIQR--MVF 123
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFS 297
E+N+ + +RF++DC+I GG W++V + S+C LE D Y+ +I+ GE+
Sbjct: 124 EANLPYVMRFLLDCSIFGGCWLKVSDYTIIPKHQQSSHCSLEIDLDYNSVIALDVSGEWI 183
Query: 298 KMAPFRILSFDIECAGRKGH-FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
+ RILSFDIEC R+G+ FP DPVI +++++ G + T+ CAPI
Sbjct: 184 SLGAIRILSFDIECIKREGNGFPSAQEDPVIAISSIIETVGFPDKKWSFIFTIGECAPIS 243
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
G + SF E D+LLAW F R VDPD++ GYNI FD+PYLIE+
Sbjct: 244 GTCIFSFVNETDMLLAWSQFFRAVDPDLITGYNIVNFDIPYLIER 288
>gi|169806198|ref|XP_001827844.1| DNA polymerase delta catalytic subunit [Enterocytozoon bieneusi H348]
gi|161779292|gb|EDQ31315.1| DNA polymerase delta catalytic subunit [Enterocytozoon bieneusi H348]
Length = 968
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 303/604 (50%), Positives = 406/604 (67%), Gaps = 15/604 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KE V +S I LQNGN ETRRR+A YCLKDAYLP R+ KL Y+E+ARVT VPI
Sbjct: 364 QKEAVSYSSIHSLQNGNKETRRRIATYCLKDAYLPLRIFKKLNIFTKYIELARVTYVPIE 423
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
F L+RG SIKVLS + ++A N +IP+++ + Y+GA V+ GFY+ PIA LD
Sbjct: 424 FFLTRGTSIKVLSLIYKEANAYNYIIPDMEIKDGDT-KYDGAFVINPLKGFYKDPIAVLD 482
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F SLYPSI+++ NLCY+TL+ + A + + KTP+G+ FV S+++KG+LP ILE+
Sbjct: 483 FCSLYPSIIISNNLCYTTLLNDKMAARFKELD--IIKTPTGDCFVSSHIKKGLLPIILEK 540
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ RK K LKE +DP + +LDGRQLALK+ ANS+YGFTGA VGQLPCI IS S T+
Sbjct: 541 LLSNRKLTKKLLKETEDPELQKILDGRQLALKLCANSIYGFTGAQVGQLPCISISQSTTA 600
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MI TK L+E K++ G+ H+ VIYGDTDSVM+ F P +E KL +E A+ I
Sbjct: 601 FGRDMISKTKNLIESKYSKASGFTHDVIVIYGDTDSVMLNFQEPNIELVFKLAKEIAEVI 660
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ FIKP+ LEFEKVY PYLL++KKRYAGL +TNP K DK+DTKGIETVRRDNC LVK +
Sbjct: 661 TAIFIKPVALEFEKVYCPYLLMNKKRYAGLLFTNPYKSDKIDTKGIETVRRDNCELVKII 720
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL+KIL ++DI GA+ +K I +L +++D+S LVI+K TK+ +Y VK+AH EL
Sbjct: 721 IDNCLNKILYEKDIQGAIDLIKMKIDELYNDKIDISQLVISKAYTKS--NYNVKSAHTEL 778
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
++R+R +GDR+PYVII K + Y RSEDPIYVLENNIPID YY+E+Q+S
Sbjct: 779 VNKLRER--GVEIRIGDRIPYVIICGDKKTQIYNRSEDPIYVLENNIPIDIEYYIEHQLS 836
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT-L 938
P+ R+FEPI+ N ++L R+IS + KF ++ CIGC+ + GT +
Sbjct: 837 NPIKRLFEPIMDNV-EDLFKA---RTISGDKELTGPMTKFIQKLDQCIGCQKV---GTII 889
Query: 939 CSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKA 998
C CK + ++ F WT+CQ C S+ ++C +RDCPIFY R K
Sbjct: 890 CDSCKANFFIHLSRIQAEYNMKFTQFHECWTECQRCMNSVMNKIICINRDCPIFYIRTKI 949
Query: 999 QKDM 1002
+ D+
Sbjct: 950 KNDL 953
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 162/319 (50%), Gaps = 31/319 (9%)
Query: 89 QSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCP 148
+ ++ Q IDY+ ++ E + I IFG T G + KV+ F PYFYI
Sbjct: 2 EELIILQTHIDYITSQASME------NNLPTIVIFGKTINGIPIQVKVNDFLPYFYIETS 55
Query: 149 QGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVA 208
+ P++ + +A +++ + ++ V K++I Y + S + K+
Sbjct: 56 HPVNPNE-----------LEDAIKSTTIKNNCHGVDKVLKKNIYGYVEDTS-IYYKVFFN 103
Query: 209 LPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRK 268
PT+ + I D+G+ + G +K F T+ESN F LRFM D N+ G ++I++ V +
Sbjct: 104 TPTIFRQAKAIFDKGLVISGQVVK-FKTFESNFPFVLRFMHDINLAGCSYIKIKVWEPEN 162
Query: 269 TAKTLSYCQLEFDCLYSDIISRHP-EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVI 327
T L +I P EG+++ + P +ILSFDIEC G FP DPV+
Sbjct: 163 TGNGLIIKTSH------KLIEVLPFEGKYNSIIPLKILSFDIECCGDTNAFPSALLDPVV 216
Query: 328 QVANLV--TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVM 385
Q+ N++ T+ E + I LK A I V F+ E D+L+AW FI + +PD++
Sbjct: 217 QIGNIIQSTIGNEIKQVI---FCLKEVADIPDAVVHWFDKEEDLLMAWNKFIHDENPDII 273
Query: 386 IGYNICKFDLPYLIEKEDV 404
+GYNI FD PYL+E+ ++
Sbjct: 274 LGYNIKNFDFPYLLERANI 292
>gi|259090299|pdb|3IAY|A Chain A, Ternary Complex Of Dna Polymerase Delta
Length = 919
Score = 590 bits (1521), Expect = e-165, Method: Compositional matrix adjust.
Identities = 292/492 (59%), Positives = 376/492 (76%), Gaps = 8/492 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+SIISDLQNG++ETRRRLAVYCLKDAYLP RL++KLM + NY EMARVTGVP S
Sbjct: 424 QKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFS 483
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK + + VIPN++ S+ YEGATV+E G+Y+ PIATLD
Sbjct: 484 YLLARGQQIKVVSQLFRKCLEIDTVIPNMQSQASDD-QYEGATVIEPIRGYYDVPIATLD 542
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQKGILPEILE 578
F SLYPSIMMA+NLCY+TL +LNL E TP+G+ FV + ++GILP IL+
Sbjct: 543 FNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVITPNGDYFVTTKRRRGILPIILD 602
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
EL++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT
Sbjct: 603 ELISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVT 662
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
+YGR MI TK V++K+ GY+H+A V+YGDTDSVMV+FG ++ AM LG EAA Y
Sbjct: 663 AYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLKEAMDLGTEAAKY 722
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+S F PI LEFEK Y+PYLLI+KKRYAGL+WTNP+KFDK+D KG+ +VRRD+C LV
Sbjct: 723 VSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDKFDKLDQKGLASVRRDSCSLVSI 782
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++ + L KIL++R++ GA+ +V+ TI+D+L NR+D+S L+I+K L +Y H
Sbjct: 783 VMNKVLKKILIERNVDGALAFVRETINDILHNRVDISKLIISKTL---APNYTNPQPHAV 839
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
LAERM++R+ PNVGDRV YVII K Y R+EDP++VLENNI +D+ YYL NQ+
Sbjct: 840 LAERMKRREGV-GPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQL 896
Query: 879 SKPLLRIFEPIL 890
P++ I PI+
Sbjct: 897 QNPIISIVAPII 908
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 140/355 (39%), Positives = 200/355 (56%), Gaps = 20/355 (5%)
Query: 55 ESLILRDIEQ-RQDFASR----LAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNREL 109
ES +D+ Q D A + L+ + R L + + I FQQ+D + + + ++
Sbjct: 6 ESTFEQDVSQMEHDMADQEEHDLSSFERKKLPTDFDPSLYDISFQQIDAEQSVLNGIKD- 64
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMRE 169
++ ++R FGVT EGHSV C V GF+ Y Y+ P +D ++ +
Sbjct: 65 ----ENTSTVVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSSDANDQEQINKFVH----- 115
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDG 228
N + IE+V K+SI Y PF KI V P MV R +RG + +
Sbjct: 116 -YLNETFDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNS 174
Query: 229 LGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQLEFDCLYSD 286
TY+ N+ + LR M+DC IVG +WI +P GKY + +S CQLE Y +
Sbjct: 175 WFSNGTTTYD-NIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNNRVSSCQLEVSINYRN 233
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNV 346
+I+ EG++S AP RI+SFDIECAGR G FPEP +DPVIQ+AN+V++ G K+PFIRNV
Sbjct: 234 LIAHPAEGDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKPFIRNV 293
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
TL +C+PI G + S TE ++L WR+FI +VDPDV+IGYN FD+PYL+ +
Sbjct: 294 FTLNTCSPITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNR 348
>gi|443924628|gb|ELU43623.1| DNA polymerase delta catalytic subunit [Rhizoctonia solani AG-1 IA]
Length = 1003
Score = 583 bits (1504), Expect = e-163, Method: Compositional matrix adjust.
Identities = 325/620 (52%), Positives = 399/620 (64%), Gaps = 109/620 (17%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLK--DAYLPQRLLDKLMFIFNYVEMARVTGVP 457
+KEDVHHS+I+DLQNGNAETRRRLAVYCLK DAYLPQRL+DKLM NY EMARVTGVP
Sbjct: 481 QKEDVHHSVITDLQNGNAETRRRLAVYCLKVWDAYLPQRLMDKLMCFVNYTEMARVTGVP 540
Query: 458 ISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIAT 517
++LL +GQ IKV+SQL RKA VIPN+K G G ATV+E + G+Y+ PIAT
Sbjct: 541 FNYLLQKGQQIKVISQLYRKANADGYVIPNMKAEG--MGIL-CATVIEPKRGYYDVPIAT 597
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDARKLNL-PPECVNKTPSGETFVKSNLQKGILPEI 576
LDF+SLYPSIMMA+NLCY+TL+ E + L E +TP+ + FV + +KG+LP I
Sbjct: 598 LDFSSLYPSIMMAHNLCYTTLLYKETIEQHGLVKGEDYIQTPNNDFFVTAKRRKGLLPTI 657
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
LE+L+AARKRAKADLK+ DP ++AVLDGRQLALKISANSVYGFTGAT+G+LPC+ ISSS
Sbjct: 658 LEDLIAARKRAKADLKKETDPFKRAVLDGRQLALKISANSVYGFTGATIGRLPCLAISSS 717
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
VT+YGR+MIE TK VE ++ G EH+AEVIYGDTDSVM++FG +E+ M AA
Sbjct: 718 VTAYGREMIERTKHEVETEYCINNGREHDAEVIYGDTDSVMIKFGTTDLESTM-----AA 772
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLV 756
+ I+ F+KPIKLEFEK TVRRDNC LV
Sbjct: 773 ELITAKFVKPIKLEFEK---------------------------------TVRRDNCRLV 799
Query: 757 KNLVTECLHKILVDRDIPG---AVQYVKSTISDLLMNRMDLSLLVITKGLTKTG-DDYEV 812
+ ++ CL K+L+DRD+ G AV Y K ISDLL NR+D+S LVITK L K +DY
Sbjct: 800 QTVIETCLRKMLIDRDVKGAEDAVSYTKQIISDLLQNRIDMSQLVITKALAKAAVEDYAA 859
Query: 813 KAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHY 872
K AHVELAERM+KRDA +AP +GDRV + +GA AYE+SEDP+YVLENNIPIDT Y
Sbjct: 860 KQAHVELAERMKKRDAGSAPALGDRV--LAETLYEGAAAYEKSEDPLYVLENNIPIDTKY 917
Query: 873 YLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL 932
YL+NQ+SKPL+RIFEPI G+ + P + + ++
Sbjct: 918 YLDNQLSKPLMRIFEPI---------KGEKEAATLRPYPHDPNPIATSR----------- 957
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 992
Q +L+V F RLWTQCQ CQGSLHQ
Sbjct: 958 -----------------------QTSDLQVAFARLWTQCQRCQGSLHQ------------ 982
Query: 993 YRRKKAQKDMAEAKLQLDRW 1012
KAQKD+ E+ LDR+
Sbjct: 983 ----KAQKDVEESVAVLDRF 998
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/354 (44%), Positives = 207/354 (58%), Gaps = 55/354 (15%)
Query: 77 RPPLSSG-----YVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVT----- 126
RPPL G + ++ FQQ+D+D + P ++G + +FGVT
Sbjct: 79 RPPLLVGTKFTILICSNSTVAFQQIDVD---------MFPGATG--LVFGLFGVTPVSRL 127
Query: 127 -----------REGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
+EGHSV V F PYFYI+ P+G P++ F L G+
Sbjct: 128 IYVYLLSNIHLQEGHSVLAHVTDFLPYFYIAMPRGYDPNEARAFMDHLNGQT-------- 179
Query: 176 VPQFVRHIEMVQKRSIMYYQ-----QQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
P V IE+V KRS+ Y+ + ++ PFLKI ++ V R + GL
Sbjct: 180 APGTVLKIEIVHKRSLWSYRLNARAEDETSPFLKITLSEARNVPKVRD------EYMGLF 233
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDII 288
TYESN+ F LRFM+D IVG NW+E P G Y R ++ +S CQ+E + Y D+I
Sbjct: 234 NGPITTYESNMPFELRFMVDREIVGMNWVEAPAGAYELRSDSQKISTCQIELNIRY-DLI 292
Query: 289 SRHP-EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVM 347
+P +GE+SK+AP RILSFDIECAGRKG FPE + DPVIQ+AN+VT+QGE PF+RNV
Sbjct: 293 KSYPADGEWSKVAPLRILSFDIECAGRKGIFPEASIDPVIQIANMVTVQGESSPFVRNVF 352
Query: 348 TLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
TL CA IVG DV+SF+ E +LLAWR F+ EVDPDV+IGYNI FDLPYL+++
Sbjct: 353 TLDDCAHIVGSDVISFKNEDAMLLAWRAFVEEVDPDVVIGYNIANFDLPYLLDR 406
>gi|71033557|ref|XP_766420.1| DNA polymerase delta catalytic subunit [Theileria parva strain
Muguga]
gi|68353377|gb|EAN34137.1| DNA polymerase delta catalytic subunit, putative [Theileria parva]
Length = 1095
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 301/622 (48%), Positives = 431/622 (69%), Gaps = 18/622 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+S I L NGN RRR+A YCLKD+ LP L++KL+ ++NY+EM+RVT PI
Sbjct: 471 QKEDVHYSTILKLFNGNNNDRRRIASYCLKDSILPLLLINKLLLLYNYIEMSRVTTTPIK 530
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAG---SEQGTYEGATVLEARAGFYEKPIA 516
L++RGQ I+V Q+ ++ K+ N VIP + G S + +YEGATVLE G+++ PI+
Sbjct: 531 LLITRGQQIRVTMQIYKQCKKMNYVIPVIAGGGKSSSNENSYEGATVLEPLKGYHKNPIS 590
Query: 517 TLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGE--TFVKSNLQKGILP 574
LDF SLYPSIM+A+N+CYSTL+ N PE + P F+ +KGILP
Sbjct: 591 VLDFQSLYPSIMIAHNICYSTLLNYNTIN--NYKPEDIVTVPGYNDICFINVKKRKGILP 648
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQ-LPCIEI 633
I+E L+ RK+AK + E KD + K V DGRQLALKI+ NSVYG+TGAT G LPCI++
Sbjct: 649 IIVENLINERKKAKKMMNECKDEMLKKVYDGRQLALKITTNSVYGYTGATSGGFLPCIDV 708
Query: 634 SSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR 693
++++TS+GR MI +TK L+E+ F+ G++ +++VIYGDTDSVM+ FG ++ A+ LG+
Sbjct: 709 ATAITSFGRNMIVNTKDLIEEHFSRKNGFKFDSKVIYGDTDSVMINFGTDDIQEAIDLGK 768
Query: 694 EAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNC 753
AAD I+ ++PI L FEKVY P LL+SKKRYAGLY+ N E ++K+D KGIE+VRRD C
Sbjct: 769 SAADLITSKSVRPITLLFEKVYKPLLLLSKKRYAGLYYVNSENYEKIDCKGIESVRRDFC 828
Query: 754 LLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVK 813
LL++ ++ + L+ +LV D+ GA+++VK +S+LL N +D+SLLVITK L K DYE +
Sbjct: 829 LLIQQMLEKILYLLLVKLDLDGAIEFVKQKVSELLKNDIDVSLLVITKTLGKV--DYEQR 886
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
HVELA+++RKRD AP VGDR+ Y+I+K KG ++R+E+P+YV ENN+PIDT+YY
Sbjct: 887 LPHVELAKKLRKRDPGKAPGVGDRISYIIVKGTKGEPLFDRAEEPLYVTENNLPIDTNYY 946
Query: 874 LENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI 933
L+ + LLRIFE ++ N + L SG+HTRSI+I++ + + KF + C+ C ++
Sbjct: 947 LD-SLKNVLLRIFEVVMSNPN-SLFSGEHTRSININSTTKGLMNKFLTKIRRCLSCNIVL 1004
Query: 934 SNGT-----LCSHCK-GREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSR 987
+N T CS+C GR+ ++ ++ + E L+ +LWT CQ CQG+LH V+C +R
Sbjct: 1005 NNTTESTEVFCSNCNTGRKQQILLDKLTTCRLKEDLYHKLWTHCQRCQGNLHNAVMCDNR 1064
Query: 988 DCPIFYRRKKAQKDMAEAKLQL 1009
DCPIFYRR K KD+++ + L
Sbjct: 1065 DCPIFYRRVKVAKDLSQLQSTL 1086
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 170/298 (57%), Gaps = 12/298 (4%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
++R++GVT+E SV V F PYFYI P + + ++ + E N+ K +
Sbjct: 100 MVRLYGVTKEQQSVLVCVDDFNPYFYIEKPPDLLDEYFDDLKRVFNKYLSEQNQFKKSLR 159
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQL----DGLGMKSF 234
+V I+ V+ S+M Y + + FL+IVV+ P MV++ R ++ G+ L D + + F
Sbjct: 160 YVLDIQKVRLTSLMMYDENGEKDFLRIVVSSPRMVSNLRSFIESGVDLSVEGDSVSIPLF 219
Query: 235 -MTYESNVLFALRFMIDCNIVGGNWIEVPVGKY-----RKTAKTLSYCQLEFDCLYSDII 288
TYE+N+ + LRF++D N++ G+W+ +P Y + + LS C +E +C +SDII
Sbjct: 220 RQTYEANLPYVLRFLLDNNVICGSWLMIPHNTYTLNDPKNFSALLSNCNIEVNCGHSDII 279
Query: 289 SRHPEGEFSKMAPFRILSFDIECAGRKGH-FPEPTHDPVIQVANLVTLQGEKQPFIRN-V 346
+ E+ + P +ILSFDIEC G FP +DPVIQ+++++ G +N V
Sbjct: 280 NLPLHNEYETIGPIKILSFDIECIKLNGTGFPNANNDPVIQISSVIHTHGNDLNCTKNFV 339
Query: 347 MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
TLK C + ++SF+ E +LLAW DF+ VDPD + GYNI FDLPYL+ + V
Sbjct: 340 FTLKECDSLANCTILSFDNEEQLLLAWNDFVTFVDPDFLTGYNIILFDLPYLLTRSSV 397
>gi|357464727|ref|XP_003602645.1| DNA polymerase [Medicago truncatula]
gi|355491693|gb|AES72896.1| DNA polymerase [Medicago truncatula]
Length = 550
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 284/333 (85%), Positives = 308/333 (92%)
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC 553
+ G TVLEARAGFYEKPIATLDFASLYPSIMMAYNLCY TLVTPE+AR LN+P E
Sbjct: 206 DSGASFHVTVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPENARMLNIPLES 265
Query: 554 VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKIS 613
+NKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKIS
Sbjct: 266 MNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKIS 325
Query: 614 ANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDT 673
ANSVYGFTGA++GQLPC+EISSSVTSYGRQMIEHTKKLVE+KFT + GY++NAEVIYGDT
Sbjct: 326 ANSVYGFTGASIGQLPCLEISSSVTSYGRQMIEHTKKLVEEKFTRLNGYDNNAEVIYGDT 385
Query: 674 DSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN 733
DSVMVQFGV TV+ AM LG+EAA++ISGTF KPIKLEFEKVY PYLLISKKRYAGL+WT
Sbjct: 386 DSVMVQFGVSTVKDAMDLGKEAAEHISGTFTKPIKLEFEKVYCPYLLISKKRYAGLFWTK 445
Query: 734 PEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMD 793
+ DKMDTKGIETVRRDNCLLVKNLV +CLHKIL++++IP AVQ+VK+ ISDLLMNRMD
Sbjct: 446 EDSHDKMDTKGIETVRRDNCLLVKNLVNDCLHKILIEKNIPAAVQHVKNAISDLLMNRMD 505
Query: 794 LSLLVITKGLTKTGDDYEVKAAHVELAERMRKR 826
LSLLVITKGLTKTGDDYEVK AHVELAERMRKR
Sbjct: 506 LSLLVITKGLTKTGDDYEVKTAHVELAERMRKR 538
>gi|163916151|gb|AAI57513.1| Unknown (protein for MGC:180510) [Xenopus (Silurana) tropicalis]
Length = 911
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 282/424 (66%), Positives = 343/424 (80%), Gaps = 3/424 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RL++KLM + NY+EMARVTGVP+S
Sbjct: 490 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLMEKLMCVINYMEMARVTGVPLS 549
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQLLR+A +++LV+P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 550 YLLSRGQQIKVVSQLLRQAMKQDLVMPVVKSEGGED--YTGATVIEPLKGYYDVPIATLD 607
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ K L PE KTP+G+ FVK++++KG+LPEILE
Sbjct: 608 FSSLYPSIMMAHNLCYTTLLQSGSIDKYGLSPEDFIKTPTGDCFVKASIRKGLLPEILEN 667
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARKRAK +LK+ DP ++ VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 668 LLCARKRAKTELKKETDPFKQKVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 727
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ +A+VIYGDTDSVM + GV TV M++GREAA+++
Sbjct: 728 FGRQMIEKTKQLVESKYTLDNGYKADAKVIYGDTDSVMCKLGVQTVGETMEIGREAAEWV 787
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW-TNPEKFDKMDTKGIETVRRDNCLLVKN 758
S F PIKLEFEKVY+PYLLI+KKRYAGLY+ ++ DKMD KGIETVRRDNC LV N
Sbjct: 788 SSHFTPPIKLEFEKVYFPYLLINKKRYAGLYFSSSANTHDKMDCKGIETVRRDNCPLVAN 847
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
L+ CL KIL+DRD GAV++ K ISDLL NR+D+S LVITK LT+T D+Y K AHVE
Sbjct: 848 LINTCLQKILIDRDPMGAVEHAKDVISDLLCNRIDISQLVITKELTRTADEYAGKQAHVE 907
Query: 819 LAER 822
LAER
Sbjct: 908 LAER 911
Score = 317 bits (811), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 220/342 (64%), Gaps = 15/342 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
KW RPP+S + Q++ FQQ+++D+ +G +L + G IIR+FG+T EG+SVC
Sbjct: 74 KWLRPPVSLTDPKE-QTLCFQQVELDHYVGSHVSGMLGATQGPVPIIRMFGITEEGNSVC 132
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSI 191
C +HGF PYFY+ C G +D+S F + L + + R++K + Q V +++ K ++
Sbjct: 133 CHIHGFAPYFYVPCHTGFKQEDLSDFKKELNSAVIKDMRSNKDSISQAVLAVDVCHKENM 192
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y +K PF+KI +ALP ++A + +L++G++ + YE+N+ F +RFM+D
Sbjct: 193 YGYHGKKIIPFMKITMALPRLIAPAKRLLEQGLRFGRHPTHCYQAYEANIDFEIRFMVDN 252
Query: 252 NIVGGNWIEVPVGKYR------------KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKM 299
+IVG NWIE+P GKYR + +S Q+E D ++D+IS EG++ K+
Sbjct: 253 DIVGCNWIELPAGKYRLRKESQDEGPSKENPSKVSLAQIEVDISWADLISHPAEGDWQKI 312
Query: 300 APFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVD 359
AP R+LSFDIECAGRKG FPEP DPVIQ+AN+V QGEK FIRNV TL +C+ IVG
Sbjct: 313 APLRVLSFDIECAGRKGVFPEPDKDPVIQIANMVLRQGEKDAFIRNVFTLGTCSSIVGSQ 372
Query: 360 VMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V+ F+ E +L AW DF+R +DPD++ GYNI FD+PYLI +
Sbjct: 373 VLCFDREDALLKAWADFVRTIDPDIITGYNIQNFDMPYLINR 414
>gi|84998308|ref|XP_953875.1| DNA polymerase delta catalytic subunit (Pold1 ) [Theileria annulata]
gi|65304872|emb|CAI73197.1| DNA polymerase delta catalytic subunit (Pold1 homologue), putative
[Theileria annulata]
Length = 1088
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 302/644 (46%), Positives = 430/644 (66%), Gaps = 40/644 (6%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+S I L NGN RRR+A YCLKD+ LP L++KL+ ++NY+EM+RVT PI
Sbjct: 442 QKEDVHYSTILKLFNGNNNDRRRIASYCLKDSILPLLLINKLLLLYNYIEMSRVTTTPIK 501
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAG---SEQGTYEGATVLEARAGFYEKPIA 516
L++RGQ I+V Q+ ++ K+ N VIP + G S + +YEGATVLE G+++ PI+
Sbjct: 502 LLITRGQQIRVTMQIYKQCKKMNYVIPVITGGGKNSSNENSYEGATVLEPLKGYHKNPIS 561
Query: 517 TLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGE--TFVKSNLQKGILP 574
LDF SLYPSIM+A+N+CYSTL+ + PE V + P F+ N +KGILP
Sbjct: 562 VLDFQSLYPSIMIAHNICYSTLLNYNNINNYR--PEDVVRVPGYNDICFISVNKRKGILP 619
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQ-LPCIEI 633
I+E L+ RK+AK + E KD + K V DGRQLALKI+ NSVYG+TGAT G LPCI++
Sbjct: 620 IIVENLINERKKAKKMMNECKDEMLKKVYDGRQLALKITTNSVYGYTGATSGGFLPCIDV 679
Query: 634 SSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR 693
++++TS+GR MI +TK L+E+ FT G++ +++VIYGDTDSVM+ FG ++ A+ LG+
Sbjct: 680 ATAITSFGRNMIVNTKNLIEEHFTVKNGFKFDSKVIYGDTDSVMINFGTDDIQEAIDLGK 739
Query: 694 EAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIE------- 746
AAD I+ +KPI L FEKVY P LL+SKKRYAGLY+ N EK++K+D KGIE
Sbjct: 740 NAADLITSKSVKPITLLFEKVYKPLLLLSKKRYAGLYYVNSEKYEKIDCKGIEVLVFVTI 799
Query: 747 ---TVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL 803
+VRRD CLL++ ++ + L+ +LV D+ GA+++VK +S+LL N +D+SLLVITK L
Sbjct: 800 LFQSVRRDFCLLIQQMLEQILYLLLVKLDLDGAIEFVKKKVSELLKNEIDVSLLVITKSL 859
Query: 804 TKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLE 863
K DYE + HVELA+++RKRD AP VGDR+ Y+I+K KG ++R+E+P+YV E
Sbjct: 860 GKV--DYEQRLPHVELAKKLRKRDPGKAPGVGDRISYIIVKGTKGEPLFDRAEEPLYVTE 917
Query: 864 NNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQ 923
NN+PIDT YYL+ + LLRIFE ++ N + L +G+HTR I+I++ + + KF +
Sbjct: 918 NNLPIDTSYYLD-SLKNVLLRIFEVVMTNPN-SLFNGEHTRVININSSTKGLMNKFLTKI 975
Query: 924 LSCIGCKALISNGT-----LCSHCK-GREAELYCKTVSQVQELEVLFGRLWTQCQ----- 972
C+ C ++SN T CS+C ++ ++ ++ + E L+ +LWT CQ
Sbjct: 976 RRCLSCNIVLSNSTESTEMFCSNCNTSKKQQILLDKLTACRIKEDLYHKLWTHCQRFASI 1035
Query: 973 -------ECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQL 1009
CQG+LH V+C +RDCPIFYRR K KD+ + + L
Sbjct: 1036 IYYNLLIRCQGNLHNAVMCDNRDCPIFYRRVKVSKDLTQLQSTL 1079
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 173/299 (57%), Gaps = 14/299 (4%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
++R++GVT+E SV V F+PYFYI P + ++ Q+ + E N+ K +
Sbjct: 71 VVRLYGVTKEQQSVLVCVDDFQPYFYIEKPPELLEENFEDLKQLFNKHLSEQNQFKKSLR 130
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM--- 235
V I+ + S+M Y + + FL+IVV+ P MV++ R ++ G++L+ G SF
Sbjct: 131 HVLDIQKTRLTSLMMYDENGEKDFLRIVVSSPRMVSNLRSYIESGVELEVDG-DSFTIPL 189
Query: 236 ---TYESNVLFALRFMIDCNIVGGNWIEVPVGKY-----RKTAKTLSYCQLEFDCLYSDI 287
TYE+N+ + LRF++D N++ G+W+ +P Y + + +S C +E +C YSDI
Sbjct: 190 YRQTYEANLPYVLRFLLDNNVICGSWLMIPQNCYTLNNPKNFMQLVSTCNIEVNCGYSDI 249
Query: 288 ISRHPEGEFSKMAPFRILSFDIECAGRKGH-FPEPTHDPVIQVANLVTLQGEKQPFIRN- 345
I+ E E+ + P +ILSFDIEC G FP ++DPVIQ+++++ G +N
Sbjct: 250 ITLPLENEYETIGPIKILSFDIECIKLNGTGFPNASNDPVIQISSVIHTHGNDVNNTKNF 309
Query: 346 VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
V TLK C + ++SF+ E +LLAW DF+ VDPD + GYNI FDLPYL+ + V
Sbjct: 310 VFTLKECDSLANCTILSFDNEEQLLLAWNDFVIFVDPDFLTGYNIILFDLPYLLTRSSV 368
>gi|62088700|dbj|BAD92797.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
variant [Homo sapiens]
Length = 1011
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 280/433 (64%), Positives = 346/433 (79%), Gaps = 3/433 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 487 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 546
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A + L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 547 YLLSRGQQVKVVSQLLRQAMHEGLLMPVVKSEGGED--YTGATVIEPLKGYYDVPIATLD 604
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + +TP+G+ FVK++++KG+LP+ILE
Sbjct: 605 FSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILEN 664
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 665 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 724
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREAAD++
Sbjct: 725 FGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWV 784
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKN 758
SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC LV N
Sbjct: 785 SGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVAN 844
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
LVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K AHVE
Sbjct: 845 LVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQAHVE 904
Query: 819 LAERMRKRDAATA 831
LAER R +TA
Sbjct: 905 LAERTRCSCWSTA 917
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 156/333 (46%), Positives = 212/333 (63%), Gaps = 6/333 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGHS 131
+W RP Q + ++FQQL+ID+ +G + P S GS ++R FGVT EG S
Sbjct: 80 RWLRP-TPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFS 138
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC +HGF PYFY P G GP+ + + L + +R + V +E+ +
Sbjct: 139 VCCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDSRGGRELTGPAVLAVELCSRE 198
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
S+ Y PFL+I VALP +VA R +L++GI++ GLG SF YE+NV F +RFM+
Sbjct: 199 SMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMV 258
Query: 250 DCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
D +IVG NW+E+P GKY + + + CQLE D L+SD++S PEG + ++AP R+LSFD
Sbjct: 259 DTDIVGCNWLELPAGKYALRLKEKATQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFD 318
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D
Sbjct: 319 IECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEKEED 378
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 379 LLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 411
>gi|378755079|gb|EHY65106.1| hypothetical protein NERG_01552 [Nematocida sp. 1 ERTm2]
Length = 1020
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 289/627 (46%), Positives = 403/627 (64%), Gaps = 30/627 (4%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH++ I L NG ETR+RL VYCLKD YLP R++ NY E+ARVTGVP
Sbjct: 386 QKEDVHYTQILALYNGTDETRKRLGVYCLKDTYLPIRIMYTKNLFINYCELARVTGVPFE 445
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L++RGQ I+VLSQLLR+AK N ++P V + TYEG V+E GFY P+ LD
Sbjct: 446 YLVNRGQGIRVLSQLLRQAKAYNYILPVVI---GQSETYEGGYVMEPNKGFYSNPVVVLD 502
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
+ASLYPSI+MAYN+CY+TL++ E A K++ ++P+G+ F++ + GILP IL
Sbjct: 503 YASLYPSIIMAYNMCYTTLLSKEQASKMDKSE--YTESPTGDCFLRKEKKPGILPVILTG 560
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL RK +A+LK KDP KA L+ RQLALK+SANSVYGFTGA LPCI IS SVT
Sbjct: 561 LLEGRKAVRAELKNIKDPELKASLNARQLALKVSANSVYGFTGAARTGLPCIPISRSVTG 620
Query: 640 YGRQMIEHTKKLVEDKFT----TVGGYEH--------------NAEVIYGDTDSVMVQFG 681
+GR++++ TK+LVE+++ T G E N V YGDTDSVMV
Sbjct: 621 FGREILKKTKELVENEYNKGEKTEGSDEQENNNSQKEGNRRTWNLFVAYGDTDSVMVTQP 680
Query: 682 VPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
T+E A ++G E + ++S P+ LEFEKVY+P++LI+KKRYAG T+P ++D
Sbjct: 681 GLTLEQAFQVGDEISKFVSTRLPNPLTLEFEKVYHPFVLINKKRYAGCTKTSPSDKGRID 740
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK 801
TKGIETVRRDNCLLV++L+ EC++K+ ++ D+ G +K + +LL NR+ +S L+ITK
Sbjct: 741 TKGIETVRRDNCLLVRDLMKECINKVFLEGDVEGTRALIKDRVKELLSNRIGISQLIITK 800
Query: 802 GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYV 861
+TK G DY V AHV LAERM+KR+ T P +GDRV YVII KG +ERSEDP+Y
Sbjct: 801 SITKQGGDYAVSLAHVALAERMKKRE-GTGPGLGDRVSYVII-TGKGP-LHERSEDPVYA 857
Query: 862 LENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDH--TRSISISTPSNSGIMKF 919
L NN+PIDT YYL+NQI+KPL R+ ++K+ L D+ + GI F
Sbjct: 858 LNNNLPIDTLYYLKNQITKPLERLLSYVIKDILTILAPPDNYIVGAGMAVREMPKGIGAF 917
Query: 920 AKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLH 979
K++ +C+ CKA + +C C + +T ++ L+ + + +CQE Q + H
Sbjct: 918 FKKKKTCVICKA--GDYPVCKVCDKSYPAVILETYQKLCGLQCAYHLVMRECQEMQNARH 975
Query: 980 QDVLCTSRDCPIFYRRKKAQKDMAEAK 1006
++C++RDCP++Y R + QK++ E +
Sbjct: 976 SPIVCSNRDCPVYYIRIELQKEIEEVQ 1002
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 146/318 (45%), Gaps = 37/318 (11%)
Query: 85 VSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFY 144
+++ S+ F L I Y + D+ ++ + G T+ G + C V G YFY
Sbjct: 1 MNELASVTFLPLHIYYTVEDA-----------GPLVCLQGKTQTGEEIECTVSGHYHYFY 49
Query: 145 ISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLK 204
IS G D + R V + + + +V K +I Y + + + F +
Sbjct: 50 ISKVPGESID---------------SARIEAVHKEIVKVNVVTKTNIYGYAEGEEE-FYQ 93
Query: 205 IVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV-PV 263
I + P + S + S +T+E N+ + +RFM+D IVG ++ V P
Sbjct: 94 ICIRDPKKIVSVSAAVVEYFSRMDENKNSRITFEVNIGYIIRFMVDKEIVGMGYVNVFPT 153
Query: 264 GKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTH 323
+ K KT L + P ++ P +ILS DIEC G FP PT
Sbjct: 154 KREVKNGKTF---------LTVESTRIFPIKTIDRLPPIKILSLDIECIGENNKFPIPTR 204
Query: 324 DPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPD 383
DPV+Q+ N V + + + + K+ PI G + SF E+++L AW ++ ++PD
Sbjct: 205 DPVVQIGNAVAVYPNPEIVEKVLFCTKTTNPIPGASIFSFNDEKEMLTAWSQWVSVLNPD 264
Query: 384 VMIGYNICKFDLPYLIEK 401
V+ GYNI +FD+PYL+++
Sbjct: 265 VLTGYNITQFDMPYLLDR 282
>gi|349576979|dbj|GAA22148.1| K7_Cdc2bp, partial [Saccharomyces cerevisiae Kyokai no. 7]
Length = 498
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/506 (53%), Positives = 358/506 (70%), Gaps = 12/506 (2%)
Query: 511 YEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLP-PECVNKTPSGETFVKSNLQ 569
Y+ PIATLDF SLYPSIMMA+NLCY+TL +LNL E TP+G+ FV + +
Sbjct: 1 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVITPNGDYFVTTKRR 60
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
+GILP IL+EL++ARKRAK DL++ KDP ++ VL+GRQLALKISANSVYGFTGATVG+LP
Sbjct: 61 RGILPIILDELISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLP 120
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAM 689
C+ ISSSVT+YGR MI TK V++K+ GY+H+A V+YGDTDSVMV+FG ++ AM
Sbjct: 121 CLAISSSVTAYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLKEAM 180
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
LG EAA Y+S F PI LEFEK Y+PYLLI+KKRYAGL+WTNP+KFDK+D KG+ +VR
Sbjct: 181 DLGTEAAKYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDKFDKLDQKGLASVR 240
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD+C LV ++ + L KIL++R++ GA+ +V+ TI+D+L NR+D+S L+I+K L +
Sbjct: 241 RDSCSLVSIVMNKVLKKILIERNVDGALAFVRETINDILHNRVDISKLIISKTL---APN 297
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPID 869
Y H LAERM++R+ PNVGDRV YVII K Y R+EDP++VLENNI +D
Sbjct: 298 YTNPQPHAVLAERMKRRE-GVGPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVD 354
Query: 870 THYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIG 928
+ YYL NQ+ P++ I PI+ K+ +SI I+T S G+M F K+ +C
Sbjct: 355 SRYYLTNQLQNPIISIVAPII--GDKQANGMFVVKSIKINTGSQKGGLMSFIKKVEACKS 412
Query: 929 CKALI--SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTS 986
CK + G LCS+C R ELY K + V++LE + RLWTQCQ C G+LH +VLC++
Sbjct: 413 CKGPLRKGEGPLCSNCLARSGELYIKALYDVRDLEEKYSRLWTQCQRCAGNLHSEVLCSN 472
Query: 987 RDCPIFYRRKKAQKDMAEAKLQLDRW 1012
++C IFY R K +K++ E QL +W
Sbjct: 473 KNCDIFYMRVKVKKELQEKVEQLSKW 498
>gi|67585893|ref|XP_665153.1| DNA polymerase family B subunit [Cryptosporidium hominis TU502]
gi|54655631|gb|EAL34923.1| DNA polymerase family B subunit [Cryptosporidium hominis]
Length = 487
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/491 (52%), Positives = 356/491 (72%), Gaps = 10/491 (2%)
Query: 528 MMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
M+A+N+CYSTL+ P + + N+P + +P+G +FV S+++KGILP I+EEL+AARK+A
Sbjct: 1 MIAHNICYSTLIPPLNLK--NVPEDLRKTSPTGHSFVLSSVRKGILPLIVEELIAARKKA 58
Query: 588 KADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG-QLPCIEISSSVTSYGRQMIE 646
K +++EA DP ++L+GRQLALK SANSVYG+TGA G QLPC+E+S+S+TSYGR MI+
Sbjct: 59 KKEMEEATDPTLISILNGRQLALKTSANSVYGYTGAVAGGQLPCLELSTSITSYGRAMID 118
Query: 647 HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKP 706
TK VE + GY +A+V+YGDTDSVM+QFGV + AMKLG EAA IS F+KP
Sbjct: 119 ITKNEVEKIYRKENGYSADAKVVYGDTDSVMIQFGVSDIGEAMKLGLEAATSISKLFVKP 178
Query: 707 IKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHK 766
IKLEFEKVY P+LL++KKRYAG+ + NP+ +++D KGIETVRRDNCLLV+ +V L K
Sbjct: 179 IKLEFEKVYCPFLLMNKKRYAGVLFKNPQFHERIDCKGIETVRRDNCLLVQKVVDTVLKK 238
Query: 767 ILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKR 826
ILVD+D+ A QY +S ISDLL N++DLSLLV++K L K DDY K AHVELA+R++ R
Sbjct: 239 ILVDKDVEAAKQYTRSVISDLLKNKIDLSLLVVSKSLGK--DDYTAKLAHVELAKRLKSR 296
Query: 827 DAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIF 886
D +APN+GDRV YV+IK AKG Y+R+EDP+YVLENN+ IDT +Y++ + ++R+F
Sbjct: 297 DPGSAPNIGDRVSYVVIKGAKGQPQYDRAEDPLYVLENNLAIDTQHYVDT-LKSSVIRVF 355
Query: 887 EPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHC---K 943
E ++K+ K L SG HTRS+++ + + + F K+ L C+ CK +I G LC C +
Sbjct: 356 EGVMKDPEK-LFSGSHTRSVTVLSVTGGALAGFVKKGLQCMNCKTIIKEGPLCKDCSKQE 414
Query: 944 GREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMA 1003
E + + + +E E+ + LWTQCQ CQGS QD++CTSRDCPIFYRR K +KD+
Sbjct: 415 NMECSVLINKLHEFREKEIEYNSLWTQCQRCQGSAFQDIICTSRDCPIFYRRTKVRKDVN 474
Query: 1004 EAKLQLDRWNF 1014
Q+ R +
Sbjct: 475 SIGEQIKRLDL 485
>gi|428673126|gb|EKX74039.1| DNA polymerase delta catalytic subunit, putative [Babesia equi]
Length = 1030
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 303/662 (45%), Positives = 438/662 (66%), Gaps = 24/662 (3%)
Query: 326 VIQVANLVTLQGEKQ-PFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDV 384
+I A+++ L+ Q P I+ MT A IV ++M +D+ + R + +V V
Sbjct: 368 LITRASVLNLERFSQLPRIKKQMTTFKDA-IVSNNIMGTYENKDINIEGR-ILFDVYDLV 425
Query: 385 MIGYNICKFDLPYLI------EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLL 438
+ + + L Y+ +KEDVH+S I+ LQ G++ RRR+A YCLKD LP L+
Sbjct: 426 RRDHKLKSYTLNYVSFEFLKQQKEDVHYSTIAKLQLGSSADRRRIASYCLKDGILPLLLI 485
Query: 439 DKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIP----NVKQAGSE 494
+KL+ ++NYVEMARVT PI L+SRGQ I+V Q+ R+ K +P + A +E
Sbjct: 486 EKLLLLYNYVEMARVTSTPIKMLISRGQQIRVTMQIYRQCKIMRYAVPVLSTGSRNASNE 545
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECV 554
G YEG TVL+ + G++++PIA LDF SLYPSIM+A+NLCYSTL+ + K PPE V
Sbjct: 546 AG-YEGGTVLDPQRGYHKQPIAVLDFQSLYPSIMIAHNLCYSTLIPTSEVDKY--PPEHV 602
Query: 555 NKTPSGE--TFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKI 612
+ P E F+KS+++ G+LP I+ L+ ARKRAK + DP+ K+V DGRQLALKI
Sbjct: 603 TRVPGHEGLCFIKSSVRTGVLPIIVSNLIEARKRAKKLMASCTDPMLKSVYDGRQLALKI 662
Query: 613 SANSVYGFTGATVGQ-LPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYG 671
+ NSVYG+TGA G LPC+E+++++TS+GR MI +TK+ +E FT GY NA+V+YG
Sbjct: 663 TTNSVYGYTGAASGGFLPCVEVATAITSFGRSMILNTKQSIESHFTAENGYIANAKVVYG 722
Query: 672 DTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW 731
DTDSVM+ FG +E A++LG EAA I+ KPI L FEKVY P LL++KKRYAGL++
Sbjct: 723 DTDSVMINFGTDKIEKAIELGIEAAAKITSEATKPITLVFEKVYRPLLLLNKKRYAGLFY 782
Query: 732 TNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNR 791
+N ++K+D KGIETVRRD C LV+ ++ LH +LVD D+ GA+++VKS IS+LL N
Sbjct: 783 SNATTYEKIDCKGIETVRRDFCPLVQQMMERVLHLLLVDLDLEGAIKFVKSKISELLRNE 842
Query: 792 MDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKA 851
+D+SLLV+TK L K +Y+ + HVELA+++++RD AP VGDRV Y+I+K KG
Sbjct: 843 IDISLLVVTKSLGKV--EYDTRLPHVELAKKLKQRDPGKAPGVGDRVSYIIVKGTKGQPQ 900
Query: 852 YERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTP 911
++R+E+P+YV ENN+PIDT +YLE+ I L+R+FE I+ N + L SG+HTR I++S+
Sbjct: 901 FDRAEEPLYVAENNLPIDTQHYLES-IKSTLMRVFEVIMSN-TDSLFSGEHTRIITMSSS 958
Query: 912 SNSGIMKFAKRQLSCIGCKALISNGTLCSHC-KGREAELYCKTVSQVQELEVLFGRLWTQ 970
+ + KF K+ C+GCK++I C +C + + E+ K + ++ E + LWT
Sbjct: 959 IDGALSKFVKKVERCLGCKSVIKVPPFCENCSQKKRKEVILKKLEALRTKENDYFTLWTH 1018
Query: 971 CQ 972
CQ
Sbjct: 1019 CQ 1020
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 186/336 (55%), Gaps = 21/336 (6%)
Query: 90 SIMFQQLDIDYVIGDS--NRELLPLSSGSA-------AIIRIFGVTREGHSVCCKVHGFE 140
S +F Q D DY G + + +++ ++ + IIR++GVT++ S+ + F
Sbjct: 39 SDIFFQTDADYTYGYAPIDTDVVDMAGDHSNAKKTETPIIRLYGVTKKQESILVHLKNFM 98
Query: 141 PYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQ 200
PYFYI P+ + I+ + + E + + +FV +I +V+ S+M Y+
Sbjct: 99 PYFYIEKPKNFTEEHITDLIALFSKHLSEQPQFKRSLRFVLNITIVKLTSLMLYKDNGET 158
Query: 201 PFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF--------MTYESNVLFALRFMIDCN 252
FLKI VALP MV++ R ++ G+ L + +TYE+N+ + LRF++D
Sbjct: 159 DFLKITVALPRMVSTLRTFIESGVALQVFDPNNVNARIPLHRITYEANLPYVLRFLLDRE 218
Query: 253 IVGGNWIEVPVGKYRKTA--KTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIE 310
+VGG+W+++P G Y + + S+C +E Y IIS EGE+ + P RILSFDIE
Sbjct: 219 VVGGSWLKLPKGSYSVCSGIEKTSHCNIEVMADYDKIISMPLEGEWQSIGPIRILSFDIE 278
Query: 311 CAGRKG-HFPEPTHDPVIQVANLVTLQGEKQPFIRN-VMTLKSCAPIVGVDVMSFETERD 368
C G FP +DPVIQ+++++ G +N V TLK C P+ +V+ FE+E
Sbjct: 279 CVKFSGPGFPNANNDPVIQISSVLHTHGNNVEKTQNFVFTLKECDPLHNANVLCFESEDQ 338
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
+LLAW DF R VDPD + GYNI FD+PYLI + V
Sbjct: 339 LLLAWSDFFRYVDPDFVTGYNIINFDIPYLITRASV 374
>gi|71406868|ref|XP_805939.1| DNA polymerase delta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70869536|gb|EAN84088.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
cruzi]
Length = 833
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/434 (59%), Positives = 329/434 (75%), Gaps = 19/434 (4%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQ G+ ETRRRLAVYCLKDA LP +LL++LM + N VEMARVTGVPI
Sbjct: 409 QKEDVHHSIIADLQQGSEETRRRLAVYCLKDALLPVKLLERLMVVVNNVEMARVTGVPIE 468
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGS--EQGTYEGATVLEARAGFYEKPIAT 517
+LL RGQ IKV S +LRKAK K+L++P V+ +G +Q YEGATV+E GFY PI T
Sbjct: 469 WLLERGQQIKVFSMMLRKAKAKDLLVPAVEYSGGGGDQRGYEGATVIEPLKGFYNCPIVT 528
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
LDFASLYPSI++A+NLCYSTLV P D + P E +++TP+G+TFVK L GILPE+L
Sbjct: 529 LDFASLYPSIIIAHNLCYSTLVRPSDI--VRYPAEMLSRTPTGDTFVKKELFPGILPEVL 586
Query: 578 EELLAARKRAKADLKEA-KDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
++LLAARKRAK+ +K+ + LE VL+GRQLALKISANSVYGFTGA VG+LPC+E+SSS
Sbjct: 587 QDLLAARKRAKSLMKDVPMESLEYKVLNGRQLALKISANSVYGFTGAQVGKLPCLEVSSS 646
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGV-------PTVEAAM 689
VT+YGR MI+ TK LVE + V +V+YGDTDSVM++ +E AM
Sbjct: 647 VTAYGRLMIDQTKFLVESLYPGV-------KVVYGDTDSVMIKCLTDEKGTEKERLEYAM 699
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
G+ AA+ +S F+ PIKLEFEKVY+PYLL++KKRYAGL WTN E++DK+D KGIETVR
Sbjct: 700 TFGKGAAEEVSSHFLNPIKLEFEKVYFPYLLMNKKRYAGLLWTNTERYDKLDAKGIETVR 759
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RDNC LV ++++ L++IL+ R + AV++VK TI DLL+NR+D+S LVITK +K ++
Sbjct: 760 RDNCPLVASVISGVLNRILIQRSVDSAVEFVKGTIRDLLLNRLDISHLVITKTFSKAENE 819
Query: 810 YEVKAAHVELAERM 823
Y AHV L ERM
Sbjct: 820 YAGAQAHVALVERM 833
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 197/338 (58%), Gaps = 14/338 (4%)
Query: 72 LAKWA---RPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTRE 128
+++W RP L Y+ ++FQ LD G ++ + + ++R++GVT+E
Sbjct: 1 MSQWESLYRPQLPPEYLKH--DLLFQLLDCCQTKGSAHPTVSRVRHAENPVVRLYGVTKE 58
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQFVRHIEMVQ 187
GHSV + +EPY +I P+G P + Q+L+ + + + + + IE+
Sbjct: 59 GHSVLVHCYNYEPYLWIKAPKGWLPA----YSQLLKAELNAQLDSLTHASDTIVRIEVHN 114
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL-DRGIQLDGL--GMKSFMTYESNVLFA 244
++SIMYYQ + LKIVV LP + R +L DRG+ G G++ F TYESNV+F
Sbjct: 115 RQSIMYYQGEGLTEHLKIVVQLPQHIPRLRTLLSDRGVACAGAWDGVRVFPTYESNVIFP 174
Query: 245 LRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
LRF++D +I G NW+ +PVG + + S CQ+E C + + + G++ +APFRI
Sbjct: 175 LRFIVDNDISGCNWLTIPVGSFCIATERTSTCQIELCCSHEAVQNHDAVGQYLSIAPFRI 234
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVAN-LVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSF 363
LS DIEC G+KG FP+P DPVIQ+AN + E +P R + TLKSC PI G V S+
Sbjct: 235 LSIDIECQGKKGLFPDPEDDPVIQIANHCINYGNEAEPLTRTIFTLKSCGPIAGARVCSY 294
Query: 364 ETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
ETE ++LL W F++ +DPD+ GYNI FD PYL+ +
Sbjct: 295 ETEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNR 332
>gi|195327919|ref|XP_002030664.1| GM24455 [Drosophila sechellia]
gi|194119607|gb|EDW41650.1| GM24455 [Drosophila sechellia]
Length = 408
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/393 (64%), Positives = 303/393 (77%), Gaps = 8/393 (2%)
Query: 528 MMAYNLCYSTLVTPEDARKL----NLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
MMA+NLCY+TLV KL NL + V +TP+ FVKS +++G+LPEILE LLAA
Sbjct: 1 MMAHNLCYTTLVLGGTREKLRQQENLQDDQVERTPANNYFVKSEVRRGLLPEILESLLAA 60
Query: 584 RKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQ 643
RKRAK DLK DP ++ VLDGRQLALKISANSVYGFTGA VG+LPC+EIS SVT+YGR
Sbjct: 61 RKRAKNDLKVETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRT 120
Query: 644 MIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTF 703
MIE TK VE +T GYE+NA VIYGDTDSVMV FGV T+E +M+LGREAA+ +S F
Sbjct: 121 MIELTKNEVESHYTQANGYENNAVVIYGDTDSVMVNFGVKTLERSMELGREAAELVSSKF 180
Query: 704 IKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTEC 763
+ PIKLEFEKVYYPYLLI+KKRYAGLY+T P+ +DKMD KGIETVRRDN LV NL+ C
Sbjct: 181 VHPIKLEFEKVYYPYLLINKKRYAGLYFTRPDTYDKMDCKGIETVRRDNSPLVANLMNSC 240
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERM 823
L K+L++RD GAV YVK I+DLL NR+D+S LVITK L KT DY K AHVELA +M
Sbjct: 241 LQKLLIERDPDGAVAYVKQVIADLLCNRIDISHLVITKELAKT--DYAAKQAHVELAAKM 298
Query: 824 RKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLL 883
+KRD TAP +GDRVPYVI AAK AY+++EDP+YVLEN++PID YYLE Q+SKPLL
Sbjct: 299 KKRDPGTAPKLGDRVPYVICAAAKNTPAYQKAEDPLYVLENSVPIDATYYLEQQLSKPLL 358
Query: 884 RIFEPILK-NASKELLSGDHTRSISISTPSNSG 915
RIFE IL NA + +G+HTR+ ++ T S SG
Sbjct: 359 RIFEHILGYNAESIMCNGEHTRTRTVVT-SQSG 390
>gi|403360889|gb|EJY80140.1| DNA polymerase delta catalytic subunit [Oxytricha trifallax]
Length = 870
Score = 497 bits (1280), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/406 (61%), Positives = 318/406 (78%), Gaps = 6/406 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHS I LQ + TRRRLA+YCLKDAYLP RL++KL+ ++N+ EM+RVTGVPIS
Sbjct: 431 QKEDVHHSQIFILQEKDQFTRRRLAIYCLKDAYLPLRLMEKLLSLYNFTEMSRVTGVPIS 490
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L +RGQ IKV SQL RKA NL+IP ++ S +G +EGA V++ F+ +PIA LD
Sbjct: 491 YLFTRGQQIKVTSQLYRKANACNLLIP-TERGPSNEGKFEGALVIDPNRDFFLEPIAILD 549
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
FASLYPSIM+A+N+CYSTL+ P+ + N P+ KTP+G+ F+K+ ++KGILP ILEE
Sbjct: 550 FASLYPSIMLAHNICYSTLIPPKAVKFYN--PDHYLKTPTGDHFIKAEVKKGILPLILEE 607
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
L+ ARK+AK KE EKAVLDGRQ+A+K++ANSVYGFTGA +GQLPCI ISSSVT+
Sbjct: 608 LIEARKKAK---KEFALSDEKAVLDGRQMAMKVAANSVYGFTGAQIGQLPCIAISSSVTA 664
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
YGR+MIE +K V +F GY++++EVIYGDTDSVMV+FGV +V AM+LG+EAA+Y+
Sbjct: 665 YGREMIEMSKNFVITRFNKQNGYKYDSEVIYGDTDSVMVKFGVKSVAEAMELGQEAAEYV 724
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ F +PIKLEFEKVYYPYLL++KKRYAGL WT P+KFD +D KGIETVRRD+C LV++
Sbjct: 725 TKFFTEPIKLEFEKVYYPYLLLNKKRYAGLLWTKPDKFDCIDAKGIETVRRDSCGLVQDT 784
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTK 805
V L+ IL++RD A+ Y K ISDLL NR+DLSLLVI+KGL K
Sbjct: 785 VQNSLNMILIERDSNKALDYCKGIISDLLQNRIDLSLLVISKGLGK 830
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 145/316 (45%), Positives = 190/316 (60%), Gaps = 10/316 (3%)
Query: 91 IMFQQLDIDYVIGDSNRELLPLSSGSA--AIIRIFGVTREGHSVCCKVHGFEPYFYISCP 148
I F Q D+D I N E L IR++GVT +G+SV C VH F+PYFY+
Sbjct: 45 IEFMQFDVDSYIA-PNPEFLQSHENDKDRPHIRMYGVTAQGNSVLCHVHNFDPYFYVEVD 103
Query: 149 QGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVA 208
P+ Q ++ + N+ + V+ +E+VQK SIM Y + KS F+KI +
Sbjct: 104 SKKHPNFTPEDLQKIKSDLNNWNKQEEC---VKLVELVQKNSIMGYLE-KSGLFIKIYCS 159
Query: 209 LPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
LP V R + + G L G S +TYESN+ ++LRFMID IVG WI + GKYR
Sbjct: 160 LPKYVQQLRSLFENGSFTLRGSQCFSHITYESNLSYSLRFMIDHQIVGMQWIRIEAGKYR 219
Query: 268 K-TAKTLSYCQLEFDCLY-SDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP 325
K T +S CQLE D +DII EG++S + P RILSFDIEC KG FP+P DP
Sbjct: 220 KRTGTKMSSCQLEIDVEDPNDIIGLPFEGDYSAIGPIRILSFDIECGADKGRFPQPQTDP 279
Query: 326 VIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVM 385
VIQ+AN+V + GE QPF+RNV TLK CAPI+G V F +E +L +WRDFI EVDPD++
Sbjct: 280 VIQIANIVKIHGEDQPFVRNVFTLKECAPILGTQVNWFNSETALLASWRDFILEVDPDII 339
Query: 386 IGYNICKFDLPYLIEK 401
G+NI FD PY+I +
Sbjct: 340 TGFNIVNFDFPYIINR 355
>gi|426389767|ref|XP_004065485.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit [Gorilla gorilla gorilla]
Length = 908
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/399 (62%), Positives = 307/399 (76%), Gaps = 29/399 (7%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEA--------RAG-- 509
+LLSRGQ +KV+SQLLR+A + L++P VK G E Y GATV+E RAG
Sbjct: 545 YLLSRGQQVKVVSQLLRQAMHEGLLMPVVKSEGGED--YTGATVIEPLKGVRPQDRAGAA 602
Query: 510 ----------------FYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC 553
+Y+ PIATLDF+SLYPSIMMA+NLCY+TL+ P A KL L +
Sbjct: 603 WELLALTPGRGCSPPRYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAHKLGLTEDQ 662
Query: 554 VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKIS 613
+TP+G+ FVK++++KG+LP+ILE LL+ARKRAKA+L + DPL + VLDGRQLALK+S
Sbjct: 663 FIRTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLRRQVLDGRQLALKVS 722
Query: 614 ANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDT 673
ANSVYGFTGA VG+LPC+EIS SVT +GRQMIE TK+LVE K+T GY +A+V+YGDT
Sbjct: 723 ANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDT 782
Query: 674 DSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN 733
DSVM +FGV +V AM LGREAAD++SG F PI+LEFEKVY+PYLLISKKRYAGL +++
Sbjct: 783 DSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSS 842
Query: 734 -PEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDR 771
P+ D+MD KG+E VRRDNC LV NLVT L ++L+DR
Sbjct: 843 RPDAHDRMDCKGLEAVRRDNCPLVANLVTASLRRLLIDR 881
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 212/333 (63%), Gaps = 6/333 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGHS 131
+W RP Q + ++FQQL+ID+ +G + P S GS ++R FGVT EG S
Sbjct: 78 RWLRP-TPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFS 136
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC +HGF PYFY P G GP+ + + L + NR K V +E+ +
Sbjct: 137 VCCHIHGFAPYFYTPAPPGFGPEHMGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRE 196
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
S+ Y PFL+I VALP +VA R +L++GI++ GLG SF YE+NV F +RFM+
Sbjct: 197 SMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMV 256
Query: 250 DCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
D +IVG NW+E+P GKY + + + CQLE D L+SD++S PEG + ++AP R+LSFD
Sbjct: 257 DTDIVGCNWLELPAGKYALRLKEKATQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFD 316
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D
Sbjct: 317 IECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEKEED 376
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 377 LLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 409
>gi|154305265|ref|XP_001553035.1| hypothetical protein BC1G_08927 [Botryotinia fuckeliana B05.10]
Length = 846
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/359 (66%), Positives = 287/359 (79%), Gaps = 2/359 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG E+RRRLAVYCLKDA+LPQRL+DKL + NY EMARVTGVP +
Sbjct: 483 QKEDVHHTMITELFNGTPESRRRLAVYCLKDAFLPQRLMDKLSCLENYTEMARVTGVPFN 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA ++ LVIPN+ SE+ YEGATV+E G+Y PIATLD
Sbjct: 543 FLLSRGQQVKFISQLFRKALEQKLVIPNLSSNSSEE-QYEGATVIEPTRGYYSVPIATLD 601
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ + L L E TP+G+ FV + +KG+L +ILE
Sbjct: 602 FASLYPSIIQAHNLCYTTLLKKDVVEALKLEKDEDYIVTPNGDMFVTTKQRKGLLTQILE 661
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL ARK+AK +L DP +KAVL+GRQLALKISANSVYG TGATVG++PC+ I+SS T
Sbjct: 662 ELLTARKQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKVPCLPIASSTT 721
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK VE K+T GY H+A+VIYGDTDSVMV+FGV + AMKLG EAA Y
Sbjct: 722 SYGRQMIEKTKAEVEAKYTIANGYSHDAQVIYGDTDSVMVKFGVKELAEAMKLGEEAAQY 781
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
+S FIKPIKLEFEKVYYPYLLI+KKRYAGLYWTNP+K+DKMDTKGIETVRRDNC V+
Sbjct: 782 VSSKFIKPIKLEFEKVYYPYLLINKKRYAGLYWTNPDKYDKMDTKGIETVRRDNCRWVQ 840
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 199/367 (54%), Gaps = 35/367 (9%)
Query: 51 PEDEESLILRDIEQ-----RQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDS 105
P ES +L + Q +++ + + +WARP LS + + +++FQQ++ + D
Sbjct: 64 PSHFESEVLEKMTQDMETLKKNNSEKDQEWARPSLSD-FNPEVDNLIFQQIECEEGTYD- 121
Query: 106 NRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEG 165
G A +++FGVT GHSV V F Y Y++ P D + L+
Sbjct: 122 ---------GGKATVKLFGVTETGHSVMLHVKDFLHYLYVAAPVSFTHKDCEPYKMFLDS 172
Query: 166 RMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG-- 223
++ P + + +V + ++ + K ++KI V P + R ++ G
Sbjct: 173 QV-----GMHTPA-INSVSVVLRENLYGFTGNKQHAYIKITVTDPKYINKVRTTIEEGKA 226
Query: 224 -----IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK--TLSYC 276
+ DG G+ +F ++ + LRFM+D I G +W+EV KY + S C
Sbjct: 227 NWKGMWRNDGNGILTF----DSIQYVLRFMVDVKIYGMSWVEVEAKKYEIVPEHNRQSNC 282
Query: 277 QLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQ 336
Q+E Y D+I+ PEGE++KMAP RILSFDIECAGRKG FPE DPVIQ+AN+VT
Sbjct: 283 QIEAVMTYRDLIAHKPEGEWAKMAPLRILSFDIECAGRKGVFPEANQDPVIQIANIVTRY 342
Query: 337 GEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLP 396
GEK+PF+RNV L + + IV + ++ E +L WRDF+ EVDPD++IGYNI FD P
Sbjct: 343 GEKKPFVRNVFCLDTTSLIVNTQIFVYKEEETMLSKWRDFLEEVDPDIIIGYNIANFDFP 402
Query: 397 YLIEKED 403
YL+++ D
Sbjct: 403 YLLDRAD 409
>gi|340343168|emb|CCA95021.1| DNA polymerase delta, partial [Dipylidium caninum]
Length = 350
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/350 (66%), Positives = 284/350 (81%), Gaps = 12/350 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++ISDLQNGN +TRRRLAVYCLKDAYLP RLLDKLM + N VEMARVTGVPI+
Sbjct: 3 QKEDVHHNVISDLQNGNDQTRRRLAVYCLKDAYLPLRLLDKLMSVVNNVEMARVTGVPIT 62
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ +KVLSQLLRKAK+ N ++P K SE+ Y GATV+E R GFY +PI TLD
Sbjct: 63 YLLTRGQQVKVLSQLLRKAKENNFLLPTQKPGQSEE--YVGATVIEPRRGFYNEPITTLD 120
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLPPECVNKTPSGETFVKSNLQ 569
F+SLYPSIMMA+NLCY+TL+ PED K NL P+ +TPSG FVK +++
Sbjct: 121 FSSLYPSIMMAHNLCYTTLLRPEDISNSGGINNLLAKYNLGPDDYIRTPSGSYFVKKHIR 180
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
KG+LP I E+LLAARK+AK++L DP ++ VLDGRQLALK+SANSVYGFTGA VG+LP
Sbjct: 181 KGLLPMIFEKLLAARKKAKSELIMETDPFKRQVLDGRQLALKVSANSVYGFTGAQVGKLP 240
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAM 689
C+EIS SVT +GR+MIE TK+LVE+KFT GY++NA VIYGDTDS+M +FGV TVE M
Sbjct: 241 CLEISGSVTGFGREMIEETKRLVEEKFTVANGYKNNAMVIYGDTDSIMCKFGVSTVEEGM 300
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
+LGRE A+YIS F+ PI+LEFEKVY+PYLLISKKRYAGLY+T P+K+DK
Sbjct: 301 QLGREGAEYISSKFLDPIRLEFEKVYFPYLLISKKRYAGLYFTKPDKYDK 350
>gi|260946879|ref|XP_002617737.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849591|gb|EEQ39055.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 375
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/374 (59%), Positives = 289/374 (77%), Gaps = 7/374 (1%)
Query: 644 MIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTF 703
MIE TK +V++++ T GY+++A+VIYGDTDSVMV+FG +E MKLG EAA+Y+S F
Sbjct: 1 MIEKTKNVVQEQYCTKNGYDYDAQVIYGDTDSVMVKFGHSDLETCMKLGEEAANYVSTKF 60
Query: 704 IKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTEC 763
KPIKLEFEKVY+PYLLI+KKRYAGLYWT PEK DKMDTKGIETVRRDNC LV+N++T+
Sbjct: 61 KKPIKLEFEKVYFPYLLINKKRYAGLYWTRPEKADKMDTKGIETVRRDNCRLVQNVITKV 120
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERM 823
L IL +R++ A +VK TI+DLL NR+DLS LVITK +K +Y+ K AHVELA+RM
Sbjct: 121 LDYILEERNVEKAELFVKQTIADLLQNRVDLSQLVITKAYSK--HEYDGKQAHVELAKRM 178
Query: 824 RKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLL 883
+KRD +AP +GDRV YVI+ +A K YE+SEDP+YVLEN++PID YYLENQ+SKPL+
Sbjct: 179 KKRDPGSAPALGDRVAYVIVNSA-SQKNYEKSEDPLYVLENSLPIDVKYYLENQLSKPLM 237
Query: 884 RIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SNGTLC 939
RIFEPIL + +KELL+G HTR+I +S P + G+M+FAK+ C CK+ + + G LC
Sbjct: 238 RIFEPILGERKAKELLAGAHTRTIKMSAPKSGGLMRFAKKAELCKNCKSPLKPGNKGALC 297
Query: 940 SHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQ 999
+C + ELYC ++Q+ LE F RLWT+CQ CQGSLHQ+VLC+++DCPIFY RKKAQ
Sbjct: 298 ENCVSKAPELYCDALAQMNYLENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFYMRKKAQ 357
Query: 1000 KDMAEAKLQLDRWN 1013
KD + +L +W+
Sbjct: 358 KDTFQQAEELRKWD 371
>gi|313208671|emb|CBH41123.1| DNA polymerase delta, partial [Echinococcus shiquicus]
Length = 350
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/350 (63%), Positives = 279/350 (79%), Gaps = 12/350 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN +TRRRLAVYCLKDAYLP LLDKLM + N VEMARVTGVPI+
Sbjct: 3 QKEDVHHSIINDLQNGNDQTRRRLAVYCLKDAYLPLLLLDKLMSVANSVEMARVTGVPIA 62
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ +KV+SQLLRKA++ L++P + ++ Y G TV+E R GFY +PIATLD
Sbjct: 63 YLLKRGQQVKVISQLLRKAREHGLLLPTQRPGQGDE--YVGGTVIEPRRGFYNEPIATLD 120
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLPPECVNKTPSGETFVKSNLQ 569
F+SLYPSIM+A+NLCY+TL+ PED NL P+ +TP+G FVK +++
Sbjct: 121 FSSLYPSIMVAHNLCYTTLLRPEDISASGGIGSLLANYNLGPDDCIRTPTGAYFVKKHIR 180
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
KG+LP +LE+LL AR +AK ++ D + VLDGRQLALK+SANSVYGFTGA VG+LP
Sbjct: 181 KGLLPCVLEQLLEARMKAKREMAAETDQFRRRVLDGRQLALKVSANSVYGFTGAHVGKLP 240
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAM 689
C+EISSS++ +GR+MIE TK+L+E+KFTT GY+ +A+VIYGDTDSVM +FGV TVE AM
Sbjct: 241 CLEISSSISGFGREMIEETKRLIEEKFTTGNGYKSDAKVIYGDTDSVMCKFGVSTVEEAM 300
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
+LGRE A+YIS F+ PIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DK
Sbjct: 301 QLGREGAEYISDKFLNPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDK 350
>gi|313208684|emb|CBH41127.1| DNA polymerase delta, partial [Echinococcus granulosus]
Length = 350
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/350 (63%), Positives = 278/350 (79%), Gaps = 12/350 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN +TRRRLAVYCLKDAYLP LLDKLM + N VEMARVTGVPI+
Sbjct: 3 QKEDVHHSIINDLQNGNDQTRRRLAVYCLKDAYLPLLLLDKLMSVANSVEMARVTGVPIA 62
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ +KV+SQLLRKA++ L++P Q + Y G TV+E R GFY +PIATLD
Sbjct: 63 YLLKRGQQVKVISQLLRKAREHGLLLPT--QRPDQGDEYVGGTVIEPRRGFYNEPIATLD 120
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLPPECVNKTPSGETFVKSNLQ 569
F+SLYPSIM+A+NLCY+T + PED NL P+ +TP+G FVK +++
Sbjct: 121 FSSLYPSIMVAHNLCYTTFLRPEDISASGGIGGLLANYNLGPDDYIRTPTGAYFVKKHIR 180
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
KG+LP +LE+LL AR +AK ++ D + VLDGRQLALK+SANSVYGFTGA VG+LP
Sbjct: 181 KGLLPCVLEQLLEARMKAKREMAAETDQFRRRVLDGRQLALKVSANSVYGFTGAHVGKLP 240
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAM 689
C+EISSS++ +GR+MIE TK+L+E+KFTT GY+ +A+VIYGDTDSVM +FGV TVE AM
Sbjct: 241 CLEISSSISGFGREMIEETKRLLEEKFTTGNGYKSDAKVIYGDTDSVMCKFGVSTVEEAM 300
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
+LGRE A+YISG F+ PIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DK
Sbjct: 301 QLGREGAEYISGKFLNPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDK 350
>gi|390368940|ref|XP_781205.3| PREDICTED: uncharacterized protein LOC575728 [Strongylocentrotus
purpuratus]
Length = 984
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/467 (52%), Positives = 307/467 (65%), Gaps = 70/467 (14%)
Query: 548 NLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQ 607
+L P+ KTP+G FVK ++++GILPEILE+LL ARKRAKADLK+ DPL K VLDGRQ
Sbjct: 581 SLAPDQYIKTPTGNYFVKKSIRRGILPEILEDLLTARKRAKADLKKETDPLRKRVLDGRQ 640
Query: 608 LALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAE 667
LALK+SANSVYGFTGA VG+LPC+EIS S T++GR MI+ T++LVE ++T GY+ ++
Sbjct: 641 LALKVSANSVYGFTGAQVGKLPCLEISQSTTAFGRMMIDKTRQLVETRYTVENGYKTTSK 700
Query: 668 VIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYA 727
VIYGDTDSVMV+FGV TV +M+LG+EAA +IS F PIKLEFEKVY+PYLLI+KKRYA
Sbjct: 701 VIYGDTDSVMVKFGVKTVAESMELGKEAAAWISDEFPPPIKLEFEKVYFPYLLINKKRYA 760
Query: 728 GLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDL 787
GLY+T P+ +DKMD KGIETVRRD+C LV N++ L KIL++RD GA+ + K TISDL
Sbjct: 761 GLYFTKPDTYDKMDCKGIETVRRDSCPLVSNVLNNVLQKILIERDPTGALDHTKQTISDL 820
Query: 788 LMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAK 847
L NR+D+S LVITK LTKTG++Y + AHVELA RM+KRD +AP +GDRVPYVII AK
Sbjct: 821 LCNRIDISQLVITKELTKTGEEYAGRQAHVELAARMKKRDPGSAPTLGDRVPYVIIAKAK 880
Query: 848 GAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSIS 907
GA AYE+SE GDHTR+ +
Sbjct: 881 GAAAYEKSE-------------------------------------------GDHTRAKT 897
Query: 908 ISTPSNSGIMKFAKRQLSCIGCK-ALISNG-TLCSHCKGREAELYCKTVSQVQELEVLFG 965
T G+M FAK + C+GCK + +G LC CK E+ +Y K E+ L G
Sbjct: 898 QVTSKIGGLMAFAKVRSKCLGCKMGMDKDGVALCKFCKPNESSIYQK------EVRFLAG 951
Query: 966 RLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRW 1012
L RDCPIFY RKK QKD+A+ + R+
Sbjct: 952 SL-------------------RDCPIFYMRKKVQKDLADQDGLIKRF 979
>gi|313208674|emb|CBH41124.1| DNA polymerase delta, partial [Echinococcus vogeli]
Length = 350
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/350 (63%), Positives = 279/350 (79%), Gaps = 12/350 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN +TRRRLAVYCLKDAYLP LLDKLM + N VEMARVTGVPI+
Sbjct: 3 QKEDVHHSIINDLQNGNDQTRRRLAVYCLKDAYLPLLLLDKLMSVANSVEMARVTGVPIA 62
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ +KV+SQLLRKA++ L++P + ++ Y G TV+E R GFY +PIATLD
Sbjct: 63 YLLKRGQQVKVISQLLRKAREHGLLLPTQRPGQGDE--YVGGTVIEPRRGFYNEPIATLD 120
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLPPECVNKTPSGETFVKSNLQ 569
F+SLYPSIM+A+NLCY+TL+ PED NL P+ +TP+G FVK +++
Sbjct: 121 FSSLYPSIMVAHNLCYTTLLRPEDISASGGIGSLLANYNLGPDDYIRTPTGAYFVKKHIR 180
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
KG+LP +LE+LL AR +AK ++ D + VLDGRQLALK+SANSVYGFTGA VG+LP
Sbjct: 181 KGLLPCVLEQLLEARMKAKREMAAETDQFRRRVLDGRQLALKVSANSVYGFTGAQVGKLP 240
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAM 689
C+EISSS++ +GR+MIE TK+L+E+KFTT GY+ +A+VIYGDTDSVM +FGV TVE AM
Sbjct: 241 CLEISSSISGFGREMIEETKRLLEEKFTTGNGYKSDAKVIYGDTDSVMCKFGVSTVEEAM 300
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
+LGRE A+YIS F+ PIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DK
Sbjct: 301 QLGREGAEYISDKFLNPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDK 350
>gi|313208664|emb|CBH41122.1| DNA polymerase delta, partial [Echinococcus multilocularis]
Length = 350
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/350 (63%), Positives = 279/350 (79%), Gaps = 12/350 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN +TRRRLAVYCLKDAYLP LLDKLM + N VEMARVTGVPI+
Sbjct: 3 QKEDVHHSIINDLQNGNDQTRRRLAVYCLKDAYLPLLLLDKLMSVANSVEMARVTGVPIA 62
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ +KV+SQLLRKA++ L++P + ++ Y G TV+E R GFY +PIATLD
Sbjct: 63 YLLKRGQQVKVISQLLRKAREHGLLLPTQRPGQGDE--YVGGTVIEPRRGFYNEPIATLD 120
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLPPECVNKTPSGETFVKSNLQ 569
F+SLYPSIM+A+NLCY+TL+ PED NL P+ +TP+G FVK +++
Sbjct: 121 FSSLYPSIMVAHNLCYTTLLRPEDISASGGIGSLLANYNLGPDDYIRTPTGAYFVKKHIR 180
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
KG+LP +LE+LL AR +AK ++ D + VLDGRQLALK+SANSVYGFTGA VG+LP
Sbjct: 181 KGLLPCVLEQLLEARMKAKREMAAETDHFRRRVLDGRQLALKVSANSVYGFTGAHVGKLP 240
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAM 689
C+EISSS++ +GR+MIE TK+L+E+KFTT GY+ +A+VIYGDTDSVM +FGV TVE AM
Sbjct: 241 CLEISSSISGFGREMIEETKRLLEEKFTTRNGYKSDAKVIYGDTDSVMCKFGVSTVEEAM 300
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
+LGRE A+YIS F+ PIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DK
Sbjct: 301 QLGREGAEYISDKFLNPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDK 350
>gi|313208682|emb|CBH41126.1| DNA polymerase delta, partial [Echinococcus felidis]
gi|313208687|emb|CBH41128.1| DNA polymerase delta, partial [Echinococcus equinus]
Length = 350
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/350 (63%), Positives = 279/350 (79%), Gaps = 12/350 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN +TRRRLAVYCLKDAYLP LLDKLM + N VEMARVTGVPI+
Sbjct: 3 QKEDVHHSIINDLQNGNDQTRRRLAVYCLKDAYLPLLLLDKLMSVANSVEMARVTGVPIA 62
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ +KV+SQLLRKA++ L++P + ++ Y G TV+E R GFY +PIATLD
Sbjct: 63 YLLKRGQQVKVISQLLRKAREHGLLLPTQRPGQGDE--YVGGTVIEPRRGFYNEPIATLD 120
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLPPECVNKTPSGETFVKSNLQ 569
F+SLYPSIM+A+NLCY+TL+ PED NL P+ +TP+G FVK +++
Sbjct: 121 FSSLYPSIMVAHNLCYTTLLRPEDISASGGIGSLLANYNLGPDDYIRTPTGAYFVKKHIR 180
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
KG+LP +LE+LL AR +AK ++ D + VLDGRQLALK+SANSVYGFTGA VG+LP
Sbjct: 181 KGLLPCVLEQLLEARMKAKREMAAETDQFRRRVLDGRQLALKVSANSVYGFTGAHVGKLP 240
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAM 689
C+EISSS++ +GR+MIE TK+L+E+KFTT GY+ +A+VIYGDTDSVM +FGV TVE AM
Sbjct: 241 CLEISSSISGFGREMIEETKRLLEEKFTTGNGYKSDAKVIYGDTDSVMCKFGVSTVEEAM 300
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
+LGRE A+YIS F+ PIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DK
Sbjct: 301 QLGREGAEYISDKFLNPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDK 350
>gi|313208690|emb|CBH41129.1| DNA polymerase delta, partial [Echinococcus ortleppi]
gi|313208694|emb|CBH41130.1| DNA polymerase delta, partial [Echinococcus canadensis]
gi|313208698|emb|CBH41131.1| DNA polymerase delta, partial [Echinococcus canadensis]
gi|313208701|emb|CBH41132.1| DNA polymerase delta, partial [Echinococcus canadensis]
Length = 350
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/350 (63%), Positives = 279/350 (79%), Gaps = 12/350 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN +TRRRLAVYCLKDAYLP LLDKLM + N VEMARVTGVPI+
Sbjct: 3 QKEDVHHSIINDLQNGNDQTRRRLAVYCLKDAYLPLLLLDKLMSVANSVEMARVTGVPIA 62
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ +KV+SQLLRKA++ L++P + ++ Y G TV+E R GFY +PIATLD
Sbjct: 63 YLLKRGQQVKVISQLLRKAREHGLLLPTHRPGQGDE--YVGGTVIEPRRGFYNEPIATLD 120
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLPPECVNKTPSGETFVKSNLQ 569
F+SLYPSIM+A+NLCY+TL+ PED NL P+ +TP+G FVK +++
Sbjct: 121 FSSLYPSIMVAHNLCYTTLLRPEDISASGGIGSLLANYNLGPDDYIRTPTGAYFVKKHIR 180
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
KG+LP +LE+LL AR +AK ++ D + VLDGRQLALK+SANSVYGFTGA VG+LP
Sbjct: 181 KGLLPCVLEQLLEARMKAKREMAAETDQFRRRVLDGRQLALKVSANSVYGFTGAHVGKLP 240
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAM 689
C+EISSS++ +GR+MIE TK+L+E+KFTT GY+ +A+VIYGDTDSVM +FGV TVE AM
Sbjct: 241 CLEISSSISGFGREMIEETKRLLEEKFTTGNGYKSDAKVIYGDTDSVMCKFGVSTVEEAM 300
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
+LGRE A+YIS F+ PIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DK
Sbjct: 301 QLGREGAEYISDKFLNPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDK 350
>gi|313208679|emb|CBH41125.1| DNA polymerase delta, partial [Echinococcus oligarthrus]
Length = 350
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/350 (62%), Positives = 277/350 (79%), Gaps = 12/350 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN +TRRRLA+YCLKDAYLP LLDKLM + N VEMARVTGVPI+
Sbjct: 3 QKEDVHHSIINDLQNGNDQTRRRLAIYCLKDAYLPLLLLDKLMSVANSVEMARVTGVPIA 62
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ +KV+SQLLRKA++ L++P + ++ Y G +V+E R GFY +PIATLD
Sbjct: 63 YLLKRGQQVKVISQLLRKAREHGLLLPTQRPGQGDE--YVGGSVIEPRRGFYNEPIATLD 120
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLPPECVNKTPSGETFVKSNLQ 569
F+SLYPSIM+A+NLCY+TL+ PED NL P+ +TP+G FVK +++
Sbjct: 121 FSSLYPSIMVAHNLCYTTLLRPEDISASGGIGSLLANYNLGPDDYIRTPTGAYFVKKHIR 180
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
KG+LP +LE+LL AR +AK ++ D + VLDGRQLALK+SANSVYGFTGA VG+LP
Sbjct: 181 KGLLPCVLEQLLKARMKAKREMAAETDQFRRRVLDGRQLALKVSANSVYGFTGAQVGKLP 240
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAM 689
C+EISSS++ +GR+MIE TK+L+E KFTT GY+ +A+VIYGDTDSVM +FGV TVE AM
Sbjct: 241 CLEISSSISGFGREMIEGTKRLLEKKFTTRNGYKSDAKVIYGDTDSVMCKFGVSTVEEAM 300
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
+LGRE A+YIS F+ PIKL+FE VY+PYLLI+KKRYAGLY+T P+K+DK
Sbjct: 301 QLGREGAEYISDKFLNPIKLDFENVYFPYLLINKKRYAGLYFTKPDKYDK 350
>gi|293323345|emb|CBJ17982.1| DNA polymerase delta [Echinococcus oligarthrus]
Length = 350
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/350 (62%), Positives = 276/350 (78%), Gaps = 12/350 (3%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNGN +TRRRLA+YCLKDAYLP LLDKLM + N VEMARVTGVPI+
Sbjct: 3 QKEDVHHSIINDLQNGNDQTRRRLAIYCLKDAYLPLLLLDKLMSVANSVEMARVTGVPIA 62
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL RGQ +KV+SQLLRKA++ L++P + ++ Y G +V+E R GFY +PIATLD
Sbjct: 63 YLLKRGQQVKVISQLLRKAREHGLLLPTQRPGQGDE--YVGGSVIEPRRGFYNEPIATLD 120
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLPPECVNKTPSGETFVKSNLQ 569
F+SLYPSIM+A+NLCY+TL+ PED NL P+ +TP+G FVK +++
Sbjct: 121 FSSLYPSIMVAHNLCYTTLLRPEDISASGGIGSLLANYNLGPDDYIRTPTGAYFVKKHIR 180
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
KG+LP +LE+LL AR +AK ++ D + VLDGRQLALK+SANSVYGFTGA VG+LP
Sbjct: 181 KGLLPCVLEQLLEARMKAKREMAAETDQFRRRVLDGRQLALKVSANSVYGFTGAQVGKLP 240
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAM 689
C+EISSS++ +GR+MI TK+L+E KFTT GY+ +A+VIYGDTDSVM +FGV TVE AM
Sbjct: 241 CLEISSSISGFGREMIGETKRLLEKKFTTRNGYKSDAKVIYGDTDSVMCKFGVSTVEEAM 300
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
+LGRE A+YIS F+ PIKL+FE VY+PYLLI+KKRYAGLY+T P+K+DK
Sbjct: 301 QLGREGAEYISDKFLNPIKLDFENVYFPYLLINKKRYAGLYFTKPDKYDK 350
>gi|148690783|gb|EDL22730.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_b [Mus musculus]
Length = 817
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/323 (65%), Positives = 263/323 (81%), Gaps = 2/323 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 483 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 542
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 543 YLLTRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 600
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVKS+++KG+LP+ILE
Sbjct: 601 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILEN 660
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 661 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 720
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 721 FGRQMIEKTKQLVESKYTVENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 780
Query: 700 SGTFIKPIKLEFEKVYYPYLLIS 722
S F PI+LEFEKV +L S
Sbjct: 781 SSHFPSPIRLEFEKVRASSVLSS 803
Score = 325 bits (834), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 159/337 (47%), Positives = 213/337 (63%), Gaps = 14/337 (4%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSG------SAAIIRIFGVTR 127
+W RP L + + ++FQQL+ID+ +G + PL G S I+R FGVT
Sbjct: 76 RWRRPTLRA-LDPSTEPLIFQQLEIDHYVGSAP----PLPEGPLPSRNSVPILRAFGVTD 130
Query: 128 EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEM 185
EG SVCC + GF PYFY P G G + +S Q L + R K V IE+
Sbjct: 131 EGFSVCCHIQGFAPYFYTPAPPGFGAEHLSELQQELNAAISRDQRGGKELSGPAVLAIEL 190
Query: 186 VQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFAL 245
+ S+ Y PFL+I +ALP ++A R +L++G+++ GLG SF YE+NV F +
Sbjct: 191 CSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFAPYEANVDFEI 250
Query: 246 RFMIDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRI 304
RFM+D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+
Sbjct: 251 RFMVDADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRV 310
Query: 305 LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFE 364
LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E
Sbjct: 311 LSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYE 370
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
E D+L AW DFI +DPDV+ GYNI FDLPYLI +
Sbjct: 371 REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISR 407
>gi|149056043|gb|EDM07474.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_a [Rattus norvegicus]
Length = 808
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/315 (66%), Positives = 260/315 (82%), Gaps = 2/315 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+
Sbjct: 481 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG 540
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 541 YLLSRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPIATLD 598
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L P+ KTP+G+ FVK++++KG+LP+ILE
Sbjct: 599 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKASVRKGLLPQILEN 658
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS SVT
Sbjct: 659 LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG 718
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE TK+LVE K+T GY+ NA+V+YGDTDSVM +FGV +V AM LGREAA+++
Sbjct: 719 FGRQMIEKTKQLVETKYTLENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 778
Query: 700 SGTFIKPIKLEFEKV 714
S F PI+LEFEKV
Sbjct: 779 SSHFPSPIRLEFEKV 793
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/334 (48%), Positives = 214/334 (64%), Gaps = 8/334 (2%)
Query: 74 KWARP-PLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGH 130
+W RP PL+ + ++FQQL+ID+ +G S E P S S I+R FGVT EG
Sbjct: 74 RWLRPTPLA--LDPSTEPLIFQQLEIDHYVGTSPPLPEGPPASRNSVPILRAFGVTDEGF 131
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC +HGF PYFY P G G + +S + L + R K V IE+ +
Sbjct: 132 SVCCHIHGFAPYFYTPAPPGFGAEHLSELQRELNAAISRDQRGGKELSGPAVLAIELCSR 191
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
S+ Y PFL+I +ALP ++A R +L++GI++ GLG SF YE+NV F +RFM
Sbjct: 192 ESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGTPSFAPYEANVDFEIRFM 251
Query: 249 IDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
+D +IVG NW+E+P GKY R+ K + CQLE D L+SD+IS PEG++ ++AP R+LSF
Sbjct: 252 VDADIVGCNWLELPAGKYVRRAEKKATLCQLEVDVLWSDVISHPPEGQWQRIAPLRVLSF 311
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E
Sbjct: 312 DIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEREE 371
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
D+L AW FI +DPDV+ GYNI FDLPYLI +
Sbjct: 372 DLLQAWATFILAMDPDVITGYNIQNFDLPYLISR 405
>gi|294890731|ref|XP_002773286.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878338|gb|EER05102.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 664
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 253/629 (40%), Positives = 353/629 (56%), Gaps = 94/629 (14%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+W R P+ + +++ S+ F Q+D+D + R P+ +G +IR+FGVT G+S+
Sbjct: 24 EWKRKPVPADALTK--SLAFMQVDVDNYSA-APRACDPIQNGEVPVIRMFGVTATGNSLM 80
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR--EANRNSKVPQFVRHIEMVQKRSI 191
C +HGF PYFY CP+ D F LE +R + S+ Q V +E+V + ++
Sbjct: 81 CHIHGFLPYFY--CPRPDQTVDCERFQTRLESALRGSQTASGSRCKQLVTSVEIVVRENL 138
Query: 192 M-YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQ-LDGLGMKSFMTYESNVLFALRFMI 249
+ + + + ++ VALP +++ RG+L+RGI L G + + T+E+N+ + LRFMI
Sbjct: 139 NGWTGRDTASEYFRVTVALPKFISTSRGVLERGIPVLQGDALWNCTTFETNIPYPLRFMI 198
Query: 250 DCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCL-YSDIISRHPEGEFSKMAPFRILS 306
D +I GG+W+E+P G Y R + +S CQ+E D Y II EG++ +AP R++S
Sbjct: 199 DNDIGGGSWVELPAGSYTPRTDSDRVSTCQIEVDVQDYRQIIGHMAEGDWMALAPLRVVS 258
Query: 307 FDIECAGRKGH-FPEPTHDPVIQV--------------------------ANLVTLQGEK 339
FDIEC G FP P PVIQ+ A +V+ Q EK
Sbjct: 259 FDIECVSEHGKGFPTPDVAPVIQIAAVMQEGTEQKHKVVWTLDTCADIADATVVSFQSEK 318
Query: 340 QPF--IRNVMTLKSCAPIVGVDVMSFETE----------------------------RDV 369
+ M L + G ++++F+ +D
Sbjct: 319 DLLSSFQQYMVLVDPDVVTGYNIINFDFPYLLDRSAHLKVHPPFEYLGRLRGVASKVKDS 378
Query: 370 LLAWRDFIREVDPDVMI-------------------GYNICKFDLPYLIE-KEDVHHSII 409
+ R R + D+ I Y++ +L E KEDVH+SII
Sbjct: 379 VFESRALGRRENKDINIEGRVQFDMLIVMQREHKLRSYSLNAVSAEFLGEQKEDVHYSII 438
Query: 410 SDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIK 469
DLQ G ETR+RLAVYCLKDA LP RL++KL+ ++NY EMARVTGVPI++LL+RGQ IK
Sbjct: 439 GDLQKGTPETRKRLAVYCLKDALLPLRLMNKLVCMYNYTEMARVTGVPINYLLTRGQMIK 498
Query: 470 VLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMM 529
V SQL RKA+ VIP Q S G YEGATVL+ GFY+ PIATLDFASLYPSIM
Sbjct: 499 VASQLFRKARSHGYVIP--AQKSSPGGEYEGATVLDPSTGFYQNPIATLDFASLYPSIMQ 556
Query: 530 AYNLCYSTLVTPEDARKLNLP---PECVNKTPSGETFVKSNLQKGILPEILEELLAARKR 586
A+NLCYSTLV P A++ NL V +TP G FVK +++KG+LP +LEELL ARKR
Sbjct: 557 AHNLCYSTLVQPSVAQRENLTEGDEGDVTRTPCGHLFVKQSVRKGLLPMVLEELLQARKR 616
Query: 587 AKADLKEAKDPLEKAVLDGRQLALKISAN 615
AK ++ +A DPL+K VL+GRQLALK+SAN
Sbjct: 617 AKKEMAQATDPLKKMVLNGRQLALKVSAN 645
>gi|356980042|gb|AET43521.1| DNA polymerase [Micromonas pusilla virus PL1]
Length = 945
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 293/894 (32%), Positives = 419/894 (46%), Gaps = 140/894 (15%)
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
S ++ IFG T G SVC F PYF+I I + + +
Sbjct: 14 SDKEHLVSIFGKTEGGKSVCVTT-SFTPYFFIKLDLKTSKQKIQEIYSTI---------D 63
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
K P+ V M++ + + +Q + F+K+ M L R ++L G
Sbjct: 64 RKCPECVLCYSMMKSKDVWGFQNNEEFMFMKVDFVNLQMRRRVDSFLKRPLELSS-GFFK 122
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPE 293
+ESN+ LR M I W+E R +++ D +D + P
Sbjct: 123 AKVFESNLDPVLRLMHRTGIQSTGWLETGDNCIRS-----HLARVDIDLFCNDWTTLKPV 177
Query: 294 GEFSKMAPFRILSFDIECAGRKGHFPEP--THDPVIQVANLVTLQGEKQPFIRNVMTLKS 351
+APF + SFDIEC G FP+ T D Q+A + G +P+ R + K
Sbjct: 178 AR-DDIAPFVVASFDIECNSSTGKFPDADVTDDACFQIAVSLCTFGSDEPYERVCLCYKE 236
Query: 352 CAPIVGVDVMSFETERD---------------VLLAW------------RDFIREVDPDV 384
G D +SF+TE+D + W R F+ DP+
Sbjct: 237 TD---GPDTISFDTEKDMLEAFQKYIHEKDIDIFTGWNIFGFDLEFIYKRAFVVGCDPEF 293
Query: 385 M---------------------IGYNICK---------FDLPYLIEK---------EDVH 405
+G N+ K FD+ + ++K +V
Sbjct: 294 FKMGKLKSQECELLIKKLSSSALGDNLLKLLPMSGRFIFDMFHEVKKGYKLDSYSLNNVS 353
Query: 406 HSIISD-------------LQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMAR 452
I D + G+ +A YC+KD LP +L+ K+ + N +EMA+
Sbjct: 354 KLYIGDQKIDMPPREMFARYREGDPVKLGEVAEYCIKDTLLPHKLMKKMCILLNLLEMAK 413
Query: 453 VTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYE 512
T VP+ FL+ RGQ IKV SQL +KA++ ++P ++ YEGATVLEA+ G Y
Sbjct: 414 ATWVPMCFLVERGQQIKVFSQLTKKARELGFMVPTIRYGTVTSDPYEGATVLEAQKGAYY 473
Query: 513 KPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGE-TFVKSNLQKG 571
PI LDF +LYPSIMMA+NLCYS+ V E N+P GE T+ +
Sbjct: 474 TPITALDFEALYPSIMMAHNLCYSSWVMNEKEYG-NIPGVTYETFNVGEKTYKFAQGVPS 532
Query: 572 ILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCI 631
+LP IL EL RK+AK D+ A + K V +G+QLA K+S NSVYGFTGA G LPC+
Sbjct: 533 LLPSILLELKQFRKKAKKDMATATGYM-KEVYNGKQLAYKVSMNSVYGFTGAGKGILPCV 591
Query: 632 EISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQF------GVPTV 685
I+S+ T GR MIE TK VE F A+V YGDTDSVMV+F GV V
Sbjct: 592 PIASTTTFKGRMMIEETKTYVEKNFP-------GAKVRYGDTDSVMVEFDVGDRKGVEAV 644
Query: 686 EAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPE----KFDKMD 741
E + ++G AA+ S F KP LE EKVY+PY L SKKRYA WT + D +D
Sbjct: 645 EYSWEVGERAAEECSALFKKPNNLELEKVYWPYFLYSKKRYAAKLWTKGKDDQMHMDYID 704
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK 801
KG++ VRRDN V+ + E L +L D + + +LL + L++++
Sbjct: 705 IKGLQVVRRDNTPHVREVCKELLDVVLTSSDPGPPTELARERAIELLSGDVPNEKLILSQ 764
Query: 802 GLTKTGDDYEVKA---------------AHVELAERMRKRDAATAPNVGDRVPYVIIKAA 846
GL+ D Y+V AHV++ +MR+R + P GDRVPY++
Sbjct: 765 GLS---DSYKVNGKSVSINSDESVGINQAHVQVVVKMRERKPGSEPQSGDRVPYLLTNTG 821
Query: 847 -KGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+ AKA+E+SEDP +V ENNIP+D HYY EN+ P+ + +P+ +N +E+
Sbjct: 822 DRKAKAFEKSEDPKFVEENNIPVDYHYYFENKFLNPVCDLLDPLFENTKQEIFG 875
>gi|402465763|gb|EJW01428.1| hypothetical protein EDEG_00022 [Edhazardia aedis USNM 41457]
Length = 371
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 261/361 (72%), Gaps = 3/361 (0%)
Query: 644 MIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTF 703
MI TK+L+EDK++ G+ H++ VIYGDTDSVM+ F ++ +L A Y+S TF
Sbjct: 1 MIASTKRLIEDKYSKKAGFTHDSRVIYGDTDSVMINFNEEDLKKVFELSNTVASYVSSTF 60
Query: 704 IKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTEC 763
IKPI LEFEKVYYPYLL++KKRYAGL +TNP+K DK+DTKGIETVRRDNC +V+ +V C
Sbjct: 61 IKPISLEFEKVYYPYLLMNKKRYAGLIYTNPQKPDKIDTKGIETVRRDNCEMVRTVVETC 120
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERM 823
L IL+ +D+ GA +VK+T+ DL +N++DLS LVI+K LTK G Y K AHVELA+++
Sbjct: 121 LDLILMKKDVEGAKNFVKNTVRDLYLNKIDLSQLVISKALTKEGSKYASKQAHVELAQKL 180
Query: 824 RKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLL 883
++RDA AP +GDR+ Y+I+K +KG AYERSEDP+YVLENNIPIDT YYLENQ+SKP+
Sbjct: 181 KQRDAGNAPMLGDRIGYIIVKGSKGMAAYERSEDPVYVLENNIPIDTEYYLENQLSKPIY 240
Query: 884 RIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCK 943
R+FEPIL+N EL G+HTR+++IS PS + F ++ CIGCK LC+ C
Sbjct: 241 RLFEPILQNVM-ELTRGEHTRTVNISLPSKGPLTTFLTKKTLCIGCKT--PGKILCNICM 297
Query: 944 GREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMA 1003
++ + E + +F + WT+CQ CQGS+ ++LC +RDCPIFY+R K +KD+
Sbjct: 298 CNFSKHFLSLQKTFDEQKAVFAKCWTECQRCQGSVVNEILCVNRDCPIFYKRTKVKKDLV 357
Query: 1004 E 1004
+
Sbjct: 358 D 358
>gi|378706335|gb|AFC35136.1| hypothetical protein OtV6_228 [Ostreococcus tauri virus RT-2011]
Length = 960
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 292/892 (32%), Positives = 429/892 (48%), Gaps = 136/892 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+I IFG T +G SVC F PYF+I P G+ + + IL + R++
Sbjct: 19 LISIFGKTEDGKSVCVTT-AFTPYFFIKLPAGIDSQKVQRIYNILGEKCRDS-------- 69
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKI----VVALPTMVASCRGILDRGIQLDGL-GMKS 233
+ +++ + + +Q + F+KI + A + + R LDR +L L G+++
Sbjct: 70 -LIAYSLMKSKDVWGFQNNEEFAFMKINFKDLQARRLVDSFLRKPLDRTPELFELFGVRN 128
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPE 293
YESN+ LR M I W++ R ++ D +D + P
Sbjct: 129 VKVYESNLDPVLRLMHRTGIQSTGWLDSGEKCVRS-----HLANVDIDLFCNDWTTLKPV 183
Query: 294 GEFSKMAPFRILSFDIECAGRKGHFPEPT--HDPVIQVANLVTLQGEKQPFIRNVMTLKS 351
+APF + S DIEC G FP+ D Q+A + G +P+ + + K
Sbjct: 184 AR-DDIAPFVVASVDIECNSSTGKFPDANIPGDACFQIAISLCKFGSDEPYDKTCLCYKQ 242
Query: 352 CAP-IVGVDVMSFETER---------------DVLLAWRDF------------------- 376
P + G ++ S+ TER D++ W F
Sbjct: 243 TDPNLEGCEIRSYATEREMLEAFQKYLHAKDVDIITGWNIFGFDMEYIYKRAQINRCHYS 302
Query: 377 ------IREVDPDVMI--------GYNICK---------FDLPYLIEK----EDVHHSII 409
+++VD +++I G N+ K FDL + ++K + +
Sbjct: 303 FYNLGKLKDVDSELVIKKLSSSALGDNLLKLLPMSGRFIFDLFHEVKKGYKLDSYKLDSV 362
Query: 410 SDLQNGNAETR------------------RRLAVYCLKDAYLPQRLLDKLMFIFNYVEMA 451
S L G+ + R +A YC+KD LP RL+ KL + N VEMA
Sbjct: 363 SKLYLGDQKIDMAPKEMFARYKEEDPVKLREVAEYCIKDTLLPHRLMKKLCTLLNLVEMA 422
Query: 452 RVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFY 511
+ T VP+ FL+ RGQ IKV SQL +KA++ ++P ++ + YEGATVLEA+ G Y
Sbjct: 423 KATWVPVPFLVERGQQIKVFSQLTKKARELGFMVPTIRYGAIPEEPYEGATVLEAQKGAY 482
Query: 512 EKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQK 570
PI LDF +LYPSIMMA+NLCYS+ V E + N+P E T+ +
Sbjct: 483 YTPITALDFEALYPSIMMAHNLCYSSYVMDE-KKYGNVPGIEYETFNIGDRTYKFAQGVP 541
Query: 571 GILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPC 630
+LP IL EL RK+AK D+ A + K V +G+QLA KIS NSVYGFTGA G LPC
Sbjct: 542 SLLPAILLELKQFRKQAKRDMAAATGFM-KEVYNGKQLAYKISMNSVYGFTGAGKGILPC 600
Query: 631 IEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQF------GVPT 684
+ I+S+ TS GR MIE TK VE F A+V YGDTDSVMV+F G
Sbjct: 601 VPIASTTTSKGRSMIEETKNYVEKNFP-------GAKVRYGDTDSVMVEFDVGDRKGEEA 653
Query: 685 VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPE----KFDKM 740
+ + ++G AA+ S F KP LE EKVY+PY L SKKRYA WT + D +
Sbjct: 654 IAYSWEVGERAAEECSALFKKPNNLELEKVYWPYFLYSKKRYAAKLWTKGKDDKMHMDYI 713
Query: 741 DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVIT 800
D KG++ VRRDN V+ + E L +L D + K +LL + L+++
Sbjct: 714 DVKGLQLVRRDNTPHVREVCKELLDVVLTSSDPGPPKELAKERAIELLSGDVPNEKLILS 773
Query: 801 KGLTKT------------GDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAK- 847
+GL+ T + + +HV++ +MR+R + P GDRVPY++ K
Sbjct: 774 QGLSDTYKVGGKNVSVTSSESVNINQSHVQVVTKMRQRKPGSEPQSGDRVPYLLTKTEDP 833
Query: 848 GAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
AKA+E++EDP YV EN +P+D HYY N+ P+ + +P+ N E+
Sbjct: 834 KAKAFEKAEDPKYVEENGVPVDYHYYFLNKFLNPVCDLLDPLYDNVKDEIFG 885
>gi|314055302|ref|YP_004063640.1| DNA polymerase [Ostreococcus tauri virus 2]
gi|313575193|emb|CBI70206.1| DNA polymerase [Ostreococcus tauri virus 2]
Length = 964
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 287/892 (32%), Positives = 431/892 (48%), Gaps = 138/892 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+I IFG T EG SVC F PYF+I P+ + I + IL+ + +++
Sbjct: 19 LISIFGKTEEGKSVCLTT-AFTPYFFIKLPENITAPKIQRIYNILDEKCKDS-------- 69
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKI----VVALPTMVASCRGILDRGIQL-DGLGMKS 233
+ +++ + + +Q + ++K+ + A + + R LDR +L D G+++
Sbjct: 70 -LVAYSVMKSKDVWGFQNNEEFAYMKVNFKHLQARRLVDSFLRKPLDRTPELFDIFGVRN 128
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPE 293
YESN+ LR M I W++ R +++ D +D + P
Sbjct: 129 VKVYESNLDPVLRLMHRTGIQSTGWLDTGDKCIRS-----HLARVDLDLFCNDWTTLKPV 183
Query: 294 GEFSKMAPFRILSFDIECAGRKGHFPEPT--HDPVIQVANLVTLQGEKQPFIRNVMTLKS 351
+APF + S DIEC G FP+ D Q+A + G +P+ + + K
Sbjct: 184 VR-DDIAPFVVASVDIECNSSTGKFPDANVPGDACFQIAISLCKFGSDEPYDKTCLCYKK 242
Query: 352 CAP-IVGVDVMSFETER---------------DVLLAWRDF------------------- 376
P + G +++S++TER D++ W F
Sbjct: 243 TDPNLEGSNILSYDTEREMLEAFQKYLHKSDVDIITGWNIFGFDMEYIYKRAQVNRCHYE 302
Query: 377 ------IREVDPDVMI--------GYNICK---------FDLPYLIEK---------EDV 404
+R+ + +++I G N+ K FD+ + ++K + V
Sbjct: 303 FFNLGKLRDTESELVIKKLSSSALGDNLLKLLPMSGRFIFDMFHEVKKGYKLDSYKLDSV 362
Query: 405 HHSIISD-------------LQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMA 451
+ D G+ R +A YC+KD LP RL+ KL + N VEMA
Sbjct: 363 SKLYLGDQKIDMAPKEMFARYNEGDPVKLREVAEYCIKDTLLPHRLMKKLCTLLNMVEMA 422
Query: 452 RVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFY 511
+ T VP +FL+ RGQ IKV SQL +KA++ ++P ++ + YEGATVLEA+ G Y
Sbjct: 423 KATWVPANFLVERGQQIKVFSQLTKKARELGFMVPTIRYGAIPEEPYEGATVLEAQKGAY 482
Query: 512 EKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKT--PSGETFVKSNLQ 569
PI LDF +LYPSIMMA+NLCYS+ V D +K P +T T+ +
Sbjct: 483 YTPITALDFEALYPSIMMAHNLCYSSYVM--DEKKYGAVPGITYETFKVGDRTYKFAQDV 540
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
+LP IL EL RK+AK D+ A + K V +G+QLA KIS NSVYGFTGA G LP
Sbjct: 541 PSLLPAILLELKQFRKQAKRDMAAATGFM-KEVYNGKQLAYKISMNSVYGFTGAGKGILP 599
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQF------GVP 683
C+ I+S+ T GR MIE TK VE F A+V YGDTDSVMV+F G
Sbjct: 600 CVPIASTTTCKGRAMIEETKNYVEKNFP-------GAKVRYGDTDSVMVEFDVGDRKGED 652
Query: 684 TVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPE----KFDK 739
+ + ++G AA+ S F KP LE EKVY+PY L SKKRYA WT + D
Sbjct: 653 AIAYSWEVGERAAEECSALFKKPNNLELEKVYWPYFLYSKKRYAAKLWTQGKDGKMHMDY 712
Query: 740 MDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVI 799
+D KG++ VRRDN V+ + E L +L D + K +LL + L++
Sbjct: 713 IDIKGLQVVRRDNTPHVREVCKELLDVVLTSSDPGPPKELAKERAIELLSGDVPNHKLIL 772
Query: 800 TKGLTKT------------GDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAK 847
++GL+ T + + +HV++ +MR+R + P GDRVPY++ K
Sbjct: 773 SQGLSDTYKVGGKNVSVTSKESVNINQSHVQVVTKMRQRKPGSEPQSGDRVPYLLTKTQD 832
Query: 848 G-AKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELL 898
AKAYE++EDP YV E+ +P+D HYY N+ P+ + +P+ +N E+
Sbjct: 833 SKAKAYEKAEDPKYVEEHGVPVDYHYYFLNKFLNPVCDLLDPLFENVKDEIF 884
>gi|294464878|gb|ADE77944.1| unknown [Picea sitchensis]
Length = 228
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/228 (86%), Positives = 211/228 (92%), Gaps = 2/228 (0%)
Query: 789 MNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKG 848
MNRMDLSLLVITKGLTKTGDDY VKAAHVELAERMRKRDAATAP VGDRVPYVIIKAAKG
Sbjct: 1 MNRMDLSLLVITKGLTKTGDDYAVKAAHVELAERMRKRDAATAPTVGDRVPYVIIKAAKG 60
Query: 849 AKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISI 908
AKAYE+SEDPIYVLENNIPID YYLENQ+SKPLLRIFEPILKNASKELL G HTR++SI
Sbjct: 61 AKAYEKSEDPIYVLENNIPIDPQYYLENQLSKPLLRIFEPILKNASKELLHGSHTRAVSI 120
Query: 909 STPSNSGIMKFAKRQLSCIGCKALIS--NGTLCSHCKGREAELYCKTVSQVQELEVLFGR 966
STPSNSGIMKFAK+QLSCIGCK IS + TLCSHCKGREAELY KTV+ V+ELE+LFG+
Sbjct: 121 STPSNSGIMKFAKKQLSCIGCKTPISKEDQTLCSHCKGREAELYQKTVANVRELEMLFGK 180
Query: 967 LWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
LWTQCQ CQ SLHQDVLCTSRDCPIFYRRKKAQKD+ EA++QL+RW F
Sbjct: 181 LWTQCQRCQASLHQDVLCTSRDCPIFYRRKKAQKDLTEAEVQLERWQF 228
>gi|258566822|ref|XP_002584155.1| DNA polymerase delta catalytic subunit [Uncinocarpus reesii 1704]
gi|237905601|gb|EEP80002.1| DNA polymerase delta catalytic subunit [Uncinocarpus reesii 1704]
Length = 834
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/316 (63%), Positives = 251/316 (79%), Gaps = 2/316 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 485 QKEDVHHTMITELFNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +K +SQL RKA ++NLVIPN++ G E+ YEGATV+E +Y+ PIATLD
Sbjct: 545 YLLSRGQQVKFISQLFRKALEQNLVIPNLRNEGGEE-QYEGATVIEPVRDYYDVPIATLD 603
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KL L E TP+G+ F ++++KG+L +ILE
Sbjct: 604 FASLYPSIIQAHNLCYTTLLNKTSVEKLKLKKDEDYIVTPNGDMFCTAHVRKGLLSQILE 663
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVT 638
ELL+ARKRAK +L DP +KAVL+GRQLALKISANSVYG TGA+ G+LPC+ I+SS T
Sbjct: 664 ELLSARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGITGASNGKLPCLAIASSTT 723
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
SYGRQMIE TK VE ++T GY H+A+VIYGDTDSVMV+FGV + AMKLG+EAAD+
Sbjct: 724 SYGRQMIERTKDEVEKRYTIANGYAHDAKVIYGDTDSVMVKFGVQELSEAMKLGQEAADF 783
Query: 699 ISGTFIKPIKLEFEKV 714
+S F+KPIKLEFEK
Sbjct: 784 VSAKFLKPIKLEFEKA 799
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 210/380 (55%), Gaps = 33/380 (8%)
Query: 29 PTTPVIDDEFLDEDVFLDETL--LPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVS 86
P TP I + + F++E L L +D L + E+ Q +W RP L + S
Sbjct: 56 PATP-ISSQSQPKSQFVEEVLEKLTQDISGLKESNAEKDQ-------QWERPSLGD-FDS 106
Query: 87 QCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYIS 146
S+ FQQ++ + R SG +++FGVT GHSV V F+ Y Y++
Sbjct: 107 TRDSLCFQQIE-----AEEGR-----FSGGQTAVKLFGVTEAGHSVLLHVTDFKHYLYVA 156
Query: 147 CPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIV 206
P D F LE ++ + + + M K ++ +Q + P+LKI
Sbjct: 157 APVSFTTSDCGPFQAFLETKIAHHQ------EVIHSVTMGMKENLFGFQGNQRNPYLKIT 210
Query: 207 VALPTMVASCRGILDRGI-QLDGLG--MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPV 263
V P + R I++ G GL + +T++ N+ + LRFMID I G +W+EVP
Sbjct: 211 VTDPKHINVVRSIIENGDGNYKGLWKVIDGILTFD-NIQYILRFMIDTGISGMSWVEVPP 269
Query: 264 GKYR--KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEP 321
KY+ S CQ+E Y D+I+ +GE++KMAP RILSFDIECAGRKG FPE
Sbjct: 270 SKYKIVPAHARQSNCQIEATVSYRDLIAHPHDGEWAKMAPLRILSFDIECAGRKGVFPEA 329
Query: 322 THDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVD 381
DPVIQ+AN+VT GE +PF+RNV L +C+ IV ++ F+ ER +L+AW+DF+++VD
Sbjct: 330 HQDPVIQIANIVTRYGESKPFVRNVFVLDTCSLIVNTQILEFDDERKMLMAWKDFLQKVD 389
Query: 382 PDVMIGYNICKFDLPYLIEK 401
PDV+IGYNI FD PYL+++
Sbjct: 390 PDVIIGYNIANFDFPYLLDR 409
>gi|195172255|ref|XP_002026914.1| GL12821 [Drosophila persimilis]
gi|194112682|gb|EDW34725.1| GL12821 [Drosophila persimilis]
Length = 344
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/331 (59%), Positives = 246/331 (74%), Gaps = 7/331 (2%)
Query: 677 MVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEK 736
MV FGV T+E +M+LGREAA+ +S F+ PIKLEFEKVYYPYLLI+KKRYAGLY+T PE
Sbjct: 1 MVNFGVKTLERSMELGREAAELVSAKFVHPIKLEFEKVYYPYLLINKKRYAGLYFTRPEA 60
Query: 737 FDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSL 796
+DKMD KGIETVRRDN LV NL+ CL K+L++RD GAV Y K I+DLL NR+D+S
Sbjct: 61 YDKMDCKGIETVRRDNSPLVANLMNSCLQKLLIERDPDGAVTYAKQVIADLLCNRIDISQ 120
Query: 797 LVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSE 856
LVITK L KT DY K AHVELA +M+KRD TAP +GDRVPYVI AAK AY ++E
Sbjct: 121 LVITKELAKT--DYAAKQAHVELAAKMKKRDPGTAPKLGDRVPYVICAAAKNTPAYAKAE 178
Query: 857 DPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSG 915
DP+YVLEN++PID YYLE Q+SKPLLRIFEPIL + A LL G+HTR+ ++ T G
Sbjct: 179 DPLYVLENSVPIDATYYLEQQLSKPLLRIFEPILGEKAESILLKGEHTRTRTVVTSKVGG 238
Query: 916 IMKFAKRQLSCIGCKALISNG----TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQC 971
+ F ++ +C+GCK L+ G LC HC+ R +ELY K V + LE F RLWT+C
Sbjct: 239 LAGFMTKKSACLGCKTLMPKGYEKACLCPHCEPRMSELYQKEVGAKRGLEETFARLWTEC 298
Query: 972 QECQGSLHQDVLCTSRDCPIFYRRKKAQKDM 1002
Q CQGSLH++V+C++RDCPIFY R+K + ++
Sbjct: 299 QRCQGSLHEEVICSNRDCPIFYMRQKVRMEL 329
>gi|397619624|gb|EJK65338.1| hypothetical protein THAOC_13810 [Thalassiosira oceanica]
Length = 359
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/317 (64%), Positives = 247/317 (77%), Gaps = 5/317 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSIISDLQ G+ R RLAVYCLKDA LPQRL+DKL + NYVEMARVTGVP+S
Sbjct: 27 QKEDVHHSIISDLQAGSDADRHRLAVYCLKDANLPQRLMDKLSVLINYVEMARVTGVPVS 86
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAG--SEQGTYEGATVLEARAGFYEKPIAT 517
FL+SRGQ IKV S +LRK + NL++P +K++G ++G YEGATVL+ FY+ PIAT
Sbjct: 87 FLISRGQQIKVFSMILRKCRDVNLLVPTLKKSGPAGDEG-YEGATVLDPIKQFYQVPIAT 145
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
LDFASLYPSIM AYNLCYST+V+ +DA+ N+ P K+ +G FV S ++KGILP IL
Sbjct: 146 LDFASLYPSIMQAYNLCYSTMVSGQDAK--NVDPSKYKKSENGHAFVHSEVKKGILPTIL 203
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
ELL+ARKRAK D+K A + EKAV +GRQLALKISANSVYGFTGA+VGQLPC+ I+SSV
Sbjct: 204 GELLSARKRAKRDMKNAPNEFEKAVQNGRQLALKISANSVYGFTGASVGQLPCVPIASSV 263
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
TSYGR ++E TK VE+ +T GYEH+A+V+YGDTDSVMV+FG TVEA L EAA+
Sbjct: 264 TSYGRYLLEKTKAYVEETYTQTNGYEHDAQVVYGDTDSVMVKFGTKTVEATFPLAIEAAE 323
Query: 698 YISGTFIKPIKLEFEKV 714
S F PI LEFEKV
Sbjct: 324 KCSAIFPDPILLEFEKV 340
>gi|345319504|ref|XP_001521151.2| PREDICTED: DNA polymerase delta catalytic subunit, partial
[Ornithorhynchus anatinus]
Length = 340
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/327 (63%), Positives = 256/327 (78%), Gaps = 3/327 (0%)
Query: 388 YNICKFDLPYLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFN 446
Y + +L E KEDV HSII+DLQNG ++RRRLAVYCLKDA LP RLL++LM + N
Sbjct: 16 YTLNAVSFHFLGEQKEDVQHSIITDLQNGTDQSRRRLAVYCLKDALLPLRLLERLMVLVN 75
Query: 447 YVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEA 506
VEMARVTGVP+ +LLSRGQ +KV+SQLLR+A + LV+P VK E Y GATV+E
Sbjct: 76 AVEMARVTGVPLGYLLSRGQQVKVVSQLLRQAMHQGLVMPVVKTEAGED--YTGATVIEP 133
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKS 566
G+Y+ PIATLDF+SLYPSIMMA+NLCY+TL+ P +L L + +TP+G+ FVKS
Sbjct: 134 HKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGARERLGLTGDQFIRTPTGDEFVKS 193
Query: 567 NLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG 626
+++KG+LP+ILE LL+ARKRAKA+L DPL + VLDGRQLALK+SANSVYGFTGA VG
Sbjct: 194 SVRKGLLPQILENLLSARKRAKAELARETDPLRRQVLDGRQLALKVSANSVYGFTGAQVG 253
Query: 627 QLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVE 686
+LPC+EIS SVT +GRQMIE TK+LVE K+T GY NA+V+YGDTDSVMV+FGV +V
Sbjct: 254 KLPCLEISQSVTGFGRQMIEKTKQLVESKYTLENGYGANAKVVYGDTDSVMVRFGVTSVA 313
Query: 687 AAMKLGREAADYISGTFIKPIKLEFEK 713
AM LGREAAD++SG F PI+LEFEK
Sbjct: 314 EAMTLGREAADWVSGHFPHPIRLEFEK 340
>gi|294890733|ref|XP_002773287.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878339|gb|EER05103.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 410
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/350 (54%), Positives = 256/350 (73%), Gaps = 7/350 (2%)
Query: 655 KFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKV 714
++ GY H+A VIYGDTDSV V+FG TVE AMKLG+EAA ++S TFI PIKLEFEKV
Sbjct: 40 RYRVENGYAHDATVIYGDTDSVFVKFGCDTVEEAMKLGQEAAAFVSTTFIDPIKLEFEKV 99
Query: 715 YYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP 774
Y+PYLL++KKRYAGLYWTNP K DK+D KGIETVRRDNC LVK +V L+ IL + +
Sbjct: 100 YFPYLLMNKKRYAGLYWTNPVKADKLDAKGIETVRRDNCELVKVVVENTLNIILKESSLD 159
Query: 775 GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD--YEVKAAHVELAERMRKRDAATAP 832
A+ +++ T+S+LL N++D+S+LVI+K L K +D Y K AHVELA+RM +RD AP
Sbjct: 160 RAIAFIRKTLSELLQNKVDMSMLVISKSLAKGMEDGAYAAKQAHVELAKRMAQRDPGNAP 219
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKN 892
+GDR+ YVII+A KG YE++EDP+Y +ENNIPID +Y+++Q+ +PL+RIFE IL N
Sbjct: 220 AIGDRIQYVIIRAPKGVAQYEKAEDPLYAVENNIPIDGQHYIDHQLKQPLMRIFENILPN 279
Query: 893 ASKELLSGDHTRSISISTPS-NSGIMKFAKRQLSCIGCKALISN---GTLCSHCKG-REA 947
A L +G+H R + S S G+ F K+ C+ CKA++ + G LC HCK +E
Sbjct: 280 AEAVLFTGEHMRKVFQSGASATGGLSMFLKKTHKCLSCKAVLKDGHGGALCQHCKNVKEG 339
Query: 948 ELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
++ + ++++ LEV F RLW++CQ CQGS+ QDV+CTSRDCP+FYRR K
Sbjct: 340 QVVIEKTNELRALEVQFSRLWSECQRCQGSVEQDVICTSRDCPVFYRRAK 389
>gi|340380252|ref|XP_003388637.1| PREDICTED: DNA polymerase delta catalytic subunit-like, partial
[Amphimedon queenslandica]
Length = 777
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/314 (61%), Positives = 247/314 (78%), Gaps = 3/314 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV H+II+DLQNGN ++RRRLAVYC+KDA LP RLL+KLM + NY+EMARVTGVP++
Sbjct: 467 QKEDVPHNIITDLQNGNEDSRRRLAVYCMKDAILPLRLLEKLMSLINYIEMARVTGVPLN 526
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQLLRKAK+ +L++P +K E+ Y G V+E + G+Y PI+ LD
Sbjct: 527 YLLTRGQQIKVVSQLLRKAKKHDLLMPVIKSESQEE--YLGGHVIEPQRGYYSSPISVLD 584
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIM A+NLCY+TL+ + + L PE KTPSG FVK ++++GILPEILE+
Sbjct: 585 FSSLYPSIMQAHNLCYTTLIL-RNVDRDKLDPEDYIKTPSGNYFVKESVRRGILPEILED 643
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL+ARK+AK +LK DP K VLDGRQLALK+SANSVYGFTGATVG+LPCIEIS SVTS
Sbjct: 644 LLSARKKAKQELKNETDPFRKKVLDGRQLALKVSANSVYGFTGATVGKLPCIEISQSVTS 703
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GRQMIE ++KL+E K+ G+ ++ +VIYGDTDSVM+ FG V ++ G+EAA Y+
Sbjct: 704 FGRQMIETSQKLIESKYCVANGFPYDTKVIYGDTDSVMILFGHDNVTDSIASGKEAAAYV 763
Query: 700 SGTFIKPIKLEFEK 713
S F PIKLEFEK
Sbjct: 764 STHFPPPIKLEFEK 777
Score = 302 bits (773), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 161/366 (43%), Positives = 223/366 (60%), Gaps = 20/366 (5%)
Query: 51 PEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVI-----GDS 105
P E+ L L ++ + +D +S +KW RP L S S++FQ +DI+ + G S
Sbjct: 31 PNFEDDLALLEVMEDEDDSSPESKWRRPSLPPIDPS-TDSVVFQHIDIESYVSSPIRGVS 89
Query: 106 NRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCP-QGMGPDDISHFHQILE 164
LP S +++++GVT+EG SVC VH F PY Y++ P P F L
Sbjct: 90 AYRHLP----SVPVLKMYGVTQEGFSVCAHVHSFMPYLYVASPFPQTTPITCKAFQDALS 145
Query: 165 GRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDR 222
+ R+S+ P V IE+V K S+ YQ +S FLK++++LP +A + +L+
Sbjct: 146 AAILSDARSSRETAPTPVLGIEVVSKSSLYGYQFNQSNTFLKVILSLPRFIAPAKRLLEL 205
Query: 223 GIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RK-----TAKTLSY 275
G+ + +G SF +ESN+ + +RFMID ++VG NWIEVP GKY RK +
Sbjct: 206 GLDVKSVGHFSFSVFESNIEYEVRFMIDTDVVGCNWIEVPPGKYSLRKFGPPGVTTPTTR 265
Query: 276 CQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTL 335
CQ+E D D IS PEGE+ K+AP RILSFDIECAGRKG FPE DPVIQ+AN++ +
Sbjct: 266 CQIELDVSCDDFISHTPEGEWQKIAPLRILSFDIECAGRKGVFPEADVDPVIQIANMIQV 325
Query: 336 QGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDL 395
QG+ PFIRNV TL SC+ IVG DV SF E+D+L +W +F++E DPD++ GYNI FDL
Sbjct: 326 QGDPAPFIRNVFTLGSCSGIVGSDVRSFANEKDLLQSWCEFLQETDPDILTGYNIVNFDL 385
Query: 396 PYLIEK 401
PYLI +
Sbjct: 386 PYLINR 391
>gi|13560886|gb|AAK30251.1|AF351198_1 DNA polymerase delta catalytic chain [Leptomonas collosoma]
Length = 314
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/304 (61%), Positives = 239/304 (78%), Gaps = 14/304 (4%)
Query: 598 LEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFT 657
LE VL+GRQLALK+SANSVYGFTGA VG+LPC+EIS+S T+YGRQMI+ TKKLVE+ +
Sbjct: 18 LEYKVLNGRQLALKVSANSVYGFTGAQVGKLPCLEISASTTAYGRQMIDQTKKLVEELYP 77
Query: 658 TVGGYEHNAEVIYGDTDSVMVQ-------FGVPTVEAAMKLGREAADYISGTFIKPIKLE 710
A+V+YGDTDSVM++ ++AAM G+EAAD +S F+KPIKLE
Sbjct: 78 -------GAKVLYGDTDSVMIKCITDESASDKERLQAAMDFGKEAADRVSSYFLKPIKLE 130
Query: 711 FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
FEKVY+PY L++KKRYAGL WTN ++FDK+D KGIETVRRDNC LV +V+ L+++L+
Sbjct: 131 FEKVYFPYSLMNKKRYAGLLWTNTDRFDKLDAKGIETVRRDNCPLVARMVSGVLNRLLIH 190
Query: 771 RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAAT 830
R + AV++VK TISDLL NR+D+S LVITK +K D+Y AH+ L ERMR+RD A+
Sbjct: 191 RSVESAVEFVKGTISDLLQNRLDISNLVITKAFSKAEDEYANAQAHIALVERMRQRDPAS 250
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL 890
AP +GDRV YVIIKAAKGAKAYERSEDPIYVL+NNIPIDT YYLE+Q++ P++RIFE ++
Sbjct: 251 APTIGDRVAYVIIKAAKGAKAYERSEDPIYVLDNNIPIDTQYYLEHQLTPPIMRIFEGVI 310
Query: 891 KNAS 894
+A+
Sbjct: 311 DDAA 314
>gi|340343158|emb|CCA95016.1| DNA polymerase delta, partial [Taenia martis]
Length = 307
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/309 (60%), Positives = 241/309 (77%), Gaps = 12/309 (3%)
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVPI++LL RGQ +KV+SQLLRKA+ L++P + ++ Y G
Sbjct: 1 LMSVANNVEMARVTGVPIAYLLKRGQQVKVISQLLRKARGHGLLLPTQRPGQGDE--YVG 58
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLP 550
TV+E + GFY +PIATLDF+SLYPSIM+A+NLCY+TL+ PED K NL
Sbjct: 59 GTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLKPEDISASGGISNLLAKYNLG 118
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
P+ +TP+G FVK +++KG+LP +LE+LL AR +AK ++ D ++ VLDGRQLAL
Sbjct: 119 PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREMVAETDHFKRRVLDGRQLAL 178
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA VG+LPC+EISSS++ +GR+MIE TK+L+E +FT GY+ NA+VIY
Sbjct: 179 KVSANSVYGFTGAQVGKLPCLEISSSISGFGREMIEETKRLLEGRFTIGNGYKSNAKVIY 238
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVM +FGV TVE AM+LGRE A+YISG F+ PIKLEFEKVY+PYLLI+KKRYAGLY
Sbjct: 239 GDTDSVMCKFGVSTVEEAMRLGREGAEYISGKFLNPIKLEFEKVYFPYLLINKKRYAGLY 298
Query: 731 WTNPEKFDK 739
+T P+K+DK
Sbjct: 299 FTKPDKYDK 307
>gi|340343154|emb|CCA95014.1| DNA polymerase delta, partial [Taenia mustelae]
Length = 307
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/309 (60%), Positives = 242/309 (78%), Gaps = 12/309 (3%)
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVPI++LL RGQ +KV+SQLLRKAK+ L++P + ++ Y G
Sbjct: 1 LMSVANNVEMARVTGVPIAYLLKRGQQVKVVSQLLRKAKEHGLLLPTQRPGQGDE--YVG 58
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPED----------ARKLNLP 550
TV+E + GFY +PI TLDF+SLYPS+M+A+NLCY+TL+ PED + K NL
Sbjct: 59 GTVIEPQRGFYNEPITTLDFSSLYPSLMVAHNLCYTTLLKPEDISASGGIGSLSAKYNLG 118
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
P+ +TP+G FVK +++KG+LP +LE+LL AR +AK ++ D ++ VLDGRQLAL
Sbjct: 119 PDDYIRTPTGAYFVKKHIRKGLLPSVLEQLLEARMKAKREMATETDQFKRRVLDGRQLAL 178
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA VG+LPC+EISSSV+ +GR+MIE K+L+E+KFT GY+ +A+VIY
Sbjct: 179 KVSANSVYGFTGAQVGKLPCLEISSSVSGFGREMIETAKRLLEEKFTIGNGYKSDAKVIY 238
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVM +FGV TVE A+KLGRE A+YISG F+ PIKLEFEKVY+PYLLI+KKRYAGLY
Sbjct: 239 GDTDSVMCKFGVSTVEEAIKLGREGAEYISGKFLNPIKLEFEKVYFPYLLINKKRYAGLY 298
Query: 731 WTNPEKFDK 739
+T P+K+DK
Sbjct: 299 FTKPDKYDK 307
>gi|313208712|emb|CBH41135.1| DNA polymerase delta, partial [Taenia asiatica]
Length = 307
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/309 (59%), Positives = 238/309 (77%), Gaps = 12/309 (3%)
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVPI++LL RGQ +KV+SQLLRKA++ L++P +Q ++ Y G
Sbjct: 1 LMLVANNVEMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPTQRQGQGDE--YVG 58
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLP 550
TV+E + GFY +PIATLDF+SLYPSIM+A+NLCY+TL+ PED NL
Sbjct: 59 GTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLKPEDISASGGISGLLANYNLG 118
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
P+ +TP G FVK +++KG+LP +LE+LL AR +AK ++ D + VLDGRQLAL
Sbjct: 119 PDDYIRTPGGAYFVKKHIRKGLLPCVLEQLLEARTKAKREMVAETDHFRRRVLDGRQLAL 178
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA VG+LPC+EISSS + +GR MIE TK+L+E +FT GY+ +A+VIY
Sbjct: 179 KVSANSVYGFTGAQVGKLPCLEISSSTSGFGRDMIEETKRLLEGRFTIENGYKGDAKVIY 238
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVM +FGV TVE AM+LGRE A+YISG F+ PIKLEFEKVY+PYLLI++KRYAGLY
Sbjct: 239 GDTDSVMCKFGVSTVEEAMQLGREGAEYISGKFVNPIKLEFEKVYFPYLLINRKRYAGLY 298
Query: 731 WTNPEKFDK 739
+T P+K+DK
Sbjct: 299 FTKPDKYDK 307
>gi|340343166|emb|CCA95020.1| DNA polymerase delta, partial [Taenia twitchelli]
Length = 307
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/309 (60%), Positives = 239/309 (77%), Gaps = 12/309 (3%)
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVPI++LL RGQ +KV+SQLLRKA+ L++P + ++ Y G
Sbjct: 1 LMSVANNVEMARVTGVPIAYLLKRGQQVKVISQLLRKARGHGLLLPTQRPGQGDE--YVG 58
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLP 550
TV+E + GFY +PIATLDF+SLYPSIM+A+NLCY+TL+ ED K NL
Sbjct: 59 GTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLKSEDISASGGISNLLAKYNLG 118
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
P+ +TP+G FVK +++KG+LP +LE+LL AR RAK + D ++ VLDGRQLAL
Sbjct: 119 PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTRAKRETVAETDHFKRRVLDGRQLAL 178
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA VG+LPC+EISSS++ +GR+MIE TK+L+E +FT GY+ NA+VIY
Sbjct: 179 KVSANSVYGFTGAQVGKLPCLEISSSISGFGREMIEETKRLLEGRFTIGNGYKSNAKVIY 238
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVM +FGV TVE AM+LGRE A+YISG F+ PIKLEFEKVY+PYLLI+KKRYAGLY
Sbjct: 239 GDTDSVMCKFGVSTVEEAMRLGREGAEYISGKFLNPIKLEFEKVYFPYLLINKKRYAGLY 298
Query: 731 WTNPEKFDK 739
+T P+K+DK
Sbjct: 299 FTKPDKYDK 307
>gi|340343156|emb|CCA95015.1| DNA polymerase delta, partial [Taenia madoquae]
Length = 307
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/309 (60%), Positives = 240/309 (77%), Gaps = 12/309 (3%)
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVPI++LL RGQ +KV+SQLLRKA++ L++P + ++ Y G
Sbjct: 1 LMSVANNVEMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPTQRPGQGDE--YVG 58
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLP 550
TV+E + GFY +PIATLDF+SLYPSIM+A+NLCY+TL+ PED NL
Sbjct: 59 GTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLKPEDISASGGISGLLANYNLG 118
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
P+ KTP+G FVK +++KG+LP +LE+LL AR +AK ++ D + VLDGRQLAL
Sbjct: 119 PDDYIKTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREMVAETDHFRRRVLDGRQLAL 178
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA VG+LPC+EISSS++ +GR+MIE TK+L+E +FT GY+ +A+VIY
Sbjct: 179 KVSANSVYGFTGAQVGKLPCLEISSSISGFGREMIEETKRLLEGRFTIGNGYKGDAKVIY 238
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVM +FGV TVE AM+LGRE A+YISG F+ PIKLEFEKVY+PYLLI+KKRYAGLY
Sbjct: 239 GDTDSVMCKFGVSTVEEAMQLGREGAEYISGKFVNPIKLEFEKVYFPYLLINKKRYAGLY 298
Query: 731 WTNPEKFDK 739
+T P+K+DK
Sbjct: 299 FTKPDKYDK 307
>gi|340343152|emb|CCA95013.1| DNA polymerase delta, partial [Taenia laticollis]
Length = 307
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/309 (60%), Positives = 239/309 (77%), Gaps = 12/309 (3%)
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVPI++LL RGQ +KV+SQLLR+AK L++P + ++ Y G
Sbjct: 1 LMSVANSVEMARVTGVPIAYLLKRGQQVKVISQLLRRAKGNGLLLPTQRPGQGDE--YVG 58
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLP 550
TV+E + GFY +PIATLDF+SLYPSIM+A+NLCY+TL+ PED NL
Sbjct: 59 GTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLRPEDISASGGLSGLLANYNLG 118
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
P+ +TP+G FVK +++KG+LP +LE+LL AR +AK ++ D + VLDGRQLAL
Sbjct: 119 PDDYIRTPTGAYFVKKHVRKGLLPCVLEQLLEARTKAKCEMVAETDHFRRRVLDGRQLAL 178
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA VG+LPC+EISSS++ +GR+MIE TK+L+E KFT GY+ +A+VIY
Sbjct: 179 KVSANSVYGFTGAQVGKLPCLEISSSISGFGREMIEETKRLLEGKFTIRNGYKSDAKVIY 238
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVM +FGV TVE AM+LGRE A+YISG F+ PIKLEFEKVY+PYLLI+KKRYAGLY
Sbjct: 239 GDTDSVMCKFGVSTVEDAMRLGREGAEYISGKFLNPIKLEFEKVYFPYLLINKKRYAGLY 298
Query: 731 WTNPEKFDK 739
+T P+K+DK
Sbjct: 299 FTKPDKYDK 307
>gi|340343160|emb|CCA95017.1| DNA polymerase delta, partial [Taenia ovis]
Length = 307
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/309 (59%), Positives = 240/309 (77%), Gaps = 12/309 (3%)
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVPI++LL RGQ +KV+SQLLRKA++ L++P + ++ Y G
Sbjct: 1 LMSVANNVEMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPTQRPGQGDE--YVG 58
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLP 550
TV+E + GFY +PIATLDF+SLYPSIM+A+NLCY+TL+ PED NL
Sbjct: 59 GTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLKPEDISASGGISGLLANYNLG 118
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
P+ +TP+G FVK +++KG+LP +LE+LL AR +AK ++ D + VLDGRQLAL
Sbjct: 119 PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREMVAETDHFRRRVLDGRQLAL 178
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA VG+LPC+EISSS++ +GR+MIE TK+L+E +FT GY+ +A+VIY
Sbjct: 179 KVSANSVYGFTGAQVGKLPCLEISSSISGFGREMIEETKRLLEGRFTIGNGYKGDAKVIY 238
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVM +FGV TVE AM+LGRE A+YISG F+ PIKLEFEKVY+PYLLI+KKRYAGLY
Sbjct: 239 GDTDSVMCKFGVSTVEEAMQLGREGAEYISGKFMNPIKLEFEKVYFPYLLINKKRYAGLY 298
Query: 731 WTNPEKFDK 739
+T P+K+DK
Sbjct: 299 FTKPDKYDK 307
>gi|313208709|emb|CBH41134.1| DNA polymerase delta, partial [Taenia saginata]
Length = 307
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/309 (59%), Positives = 237/309 (76%), Gaps = 12/309 (3%)
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVPI++LL RGQ +KV+SQLLRKA++ L++P + ++ Y G
Sbjct: 1 LMLVANNVEMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPTQRPGQGDE--YVG 58
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLP 550
TV+E + GFY +PIATLDF+SLYPSIM+A+NLCY+TL+ PED NL
Sbjct: 59 GTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLKPEDISASGGISGLLANYNLG 118
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
P+ +TP G FVK +++KG+LP +LE+LL AR +AK ++ D + VLDGRQLAL
Sbjct: 119 PDDYIRTPGGAYFVKKHIRKGLLPCVLEQLLEARTKAKREMVAETDHFRRRVLDGRQLAL 178
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA VG+LPC+EISSS + +GR MIE TK+L+E +FT GY+ +A+VIY
Sbjct: 179 KVSANSVYGFTGAQVGKLPCLEISSSTSGFGRDMIEETKRLLEGRFTIENGYKGDAKVIY 238
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVM +FGV TVE AM+LGRE A+YISG F+ PIKLEFEKVY+PYLLI+KKRYAGLY
Sbjct: 239 GDTDSVMCKFGVSTVEEAMQLGREGAEYISGKFVNPIKLEFEKVYFPYLLINKKRYAGLY 298
Query: 731 WTNPEKFDK 739
+T P+K+DK
Sbjct: 299 FTKPDKYDK 307
>gi|313208723|emb|CBH41138.1| DNA polymerase delta, partial [Taenia serialis]
Length = 307
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/309 (59%), Positives = 239/309 (77%), Gaps = 12/309 (3%)
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVPI++LL RGQ +KV+SQLLRKA++ L++P + ++ Y G
Sbjct: 1 LMSVANNVEMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPTQRPGQGDE--YVG 58
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLP 550
TV+E + GFY +PI TLDF+SLYPSIM+A+NLCY+TL+ PED NL
Sbjct: 59 GTVIEPQRGFYNEPITTLDFSSLYPSIMVAHNLCYTTLLKPEDISASGGISGLLANYNLG 118
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
P+ KTP+G FVK +++KG+LP +LE+LL AR +AK ++ D + VLDGRQLAL
Sbjct: 119 PDDYIKTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREMAAETDHFRRRVLDGRQLAL 178
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA VG+LPC+EISSS++ +GR+MIE TK+L+E++FT GY+ +A+VIY
Sbjct: 179 KVSANSVYGFTGAQVGKLPCLEISSSISGFGREMIEETKRLLEERFTIGNGYKGDAKVIY 238
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVM +FGV TVE AM+LGRE A+YIS F+ PIKLEFEKVY+PYLLI+KKRYAGLY
Sbjct: 239 GDTDSVMCKFGVSTVEEAMQLGREGAEYISSKFVNPIKLEFEKVYFPYLLINKKRYAGLY 298
Query: 731 WTNPEKFDK 739
+T P+K+DK
Sbjct: 299 FTKPDKYDK 307
>gi|313208705|emb|CBH41133.1| DNA polymerase delta, partial [Taenia solium]
Length = 307
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/309 (60%), Positives = 238/309 (77%), Gaps = 12/309 (3%)
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVPI++LL RGQ +KV+SQLLRKA++ L++P + ++ Y G
Sbjct: 1 LMSVANNVEMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPTQRPGQGDE--YVG 58
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLP 550
TV+E + GFY +PIATLDF+SLYPSIM+A+NLCY+TL+ PED NL
Sbjct: 59 GTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLKPEDISASGGISGLLANYNLG 118
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
P+ +TP+G FVK +++KG+LP +LE+LL AR RAK ++ D + VLDGRQLAL
Sbjct: 119 PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTRAKREMVAETDHFRRRVLDGRQLAL 178
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA VG+LPC+EISSS++ GR+MIE TK+L+E +FT GY+ +A+VIY
Sbjct: 179 KVSANSVYGFTGAQVGKLPCLEISSSISGIGREMIEETKRLLEGRFTIGNGYKGDAKVIY 238
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVM +FGV TVE AM+LGRE A+YISG F+ PIKLEFEKVY+PYLLI+KKRYAGLY
Sbjct: 239 GDTDSVMCKFGVSTVEEAMQLGREGAEYISGKFMNPIKLEFEKVYFPYLLINKKRYAGLY 298
Query: 731 WTNPEKFDK 739
+T P K+DK
Sbjct: 299 FTKPGKYDK 307
>gi|313208715|emb|CBH41136.1| DNA polymerase delta, partial [Taenia crassiceps]
Length = 307
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/309 (59%), Positives = 238/309 (77%), Gaps = 12/309 (3%)
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVPI++LL RGQ +KV+SQLLRKA++ L++P + ++ Y G
Sbjct: 1 LMSVANNVEMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPTQRPGQGDE--YMG 58
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLP 550
TV+E + GFY +PIATLDF+SLYPSIM+A+NLC +TL+ PED K NL
Sbjct: 59 GTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCSTTLLRPEDISASGGISNLLAKYNLG 118
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
P+ +TP+G FVK +++KG+LP +LE+LL AR +AK ++ D ++ VLDGRQLAL
Sbjct: 119 PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREMVAETDHFKQRVLDGRQLAL 178
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+S NSVYGFTGA VG+LPC+EISSS++ +GR+MIE TK+L+E +FT GY+ N +VIY
Sbjct: 179 KVSTNSVYGFTGAQVGKLPCLEISSSISGFGREMIEETKRLLEGRFTIGNGYQSNVKVIY 238
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVM +FGV TVE AM+LGRE A+YISG F+ PIKLEFEKVY+PYLLI+KKRYAGLY
Sbjct: 239 GDTDSVMCKFGVSTVEEAMRLGREGAEYISGKFLNPIKLEFEKVYFPYLLINKKRYAGLY 298
Query: 731 WTNPEKFDK 739
+T P K+DK
Sbjct: 299 FTKPGKYDK 307
>gi|340378044|ref|XP_003387538.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Amphimedon
queenslandica]
Length = 314
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/306 (60%), Positives = 234/306 (76%), Gaps = 7/306 (2%)
Query: 714 VYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
VYYPYLLI+KKRYAGL +++PE +DKMD KG+ETVRRDNC LV NL+ CLHKIL++R
Sbjct: 4 VYYPYLLINKKRYAGLCFSSPENYDKMDCKGLETVRRDNCPLVANLLNTCLHKILIERAP 63
Query: 774 PGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTG--DDYEVKAAHVELAERMRKRDAATA 831
A++Y K TISDLL NR+D+S LVI+K LT+T +Y K AHVELAE+MRKRDA +A
Sbjct: 64 FEALEYAKGTISDLLCNRIDISQLVISKELTRTSTSKEYVNKLAHVELAEKMRKRDAGSA 123
Query: 832 PNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILK 891
PN+GDRVPYVII +AKG AY+++EDPIYVLENN+PIDT YYLENQ++KPLLRIFEPIL
Sbjct: 124 PNLGDRVPYVIIASAKGTPAYKKAEDPIYVLENNVPIDTEYYLENQLAKPLLRIFEPILG 183
Query: 892 N--ASKELLSGDHTRSISISTPS-NSGIMKFAKRQLSCIGCKALISN--GTLCSHCKGRE 946
+ A ELL GDHTRS ++ T S G+ F ++ +CIGCK+++ N G +C HC+
Sbjct: 184 DSKAHSELLKGDHTRSRTVKTSSAQGGLFGFTTKRSTCIGCKSVLDNNDGVVCPHCQPLL 243
Query: 947 AELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAK 1006
+ LY K + Q+ +LE F +LWTQCQ CQGSLH+DV+CTSRDCPIFY R K +KD+
Sbjct: 244 SGLYQKEMVQLSQLEEKFSQLWTQCQRCQGSLHEDVICTSRDCPIFYMRVKVRKDLDAQD 303
Query: 1007 LQLDRW 1012
L R+
Sbjct: 304 KILQRF 309
>gi|428184446|gb|EKX53301.1| DNA polymerase delta catalytic subunit, partial [Guillardia theta
CCMP2712]
Length = 910
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/554 (41%), Positives = 325/554 (58%), Gaps = 65/554 (11%)
Query: 399 IEKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPI 458
++K+DV I + Q +A R +A YC KD L RL+++L + ++EM++VTGV +
Sbjct: 371 MQKDDVSPKQIFEFQVKDASHRGIVAKYCAKDCELVYRLIERLDVLPQFLEMSKVTGVTM 430
Query: 459 SFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG--TYEGATVLEARAGFYEKPIA 516
+ L +RGQ IKV +Q++R+A+ + VIP+++ A + + Y+GA VL + G Y +PIA
Sbjct: 431 NDLNTRGQQIKVFTQIVREARASDFVIPDMRAAPTSRDDVQYQGAFVLPPQRGIYHEPIA 490
Query: 517 TLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEI 576
TLDFASLYPSI+ NL Y TLV E + P C+ + T+ +GILP I
Sbjct: 491 TLDFASLYPSIIRGDNLSYETLVQNECELDEDTPVSCIQEY----TYKYVQHVEGILPRI 546
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
+ LL ARK+AK ++ DP++K +L+G+QLALK+S NSVYGFTGA G LPC+ I+SS
Sbjct: 547 CKNLLTARKKAKKEMALTDDPIKKGLLNGKQLALKVSCNSVYGFTGAGRGMLPCLPIASS 606
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQF----GVPTVEAAMKLG 692
VT+ G+QMI+ T + V++ F NA VIYGDTDSVMV F G ++ A++LG
Sbjct: 607 VTAIGQQMIKTTSQTVQENF--------NATVIYGDTDSVMVNFHCGEGPEALKKALELG 658
Query: 693 REAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDN 752
+ AA ++ F P +LEFEKVY PY+L SKKRYAG +T+P+K DK+D KG++ VRRDN
Sbjct: 659 QRAAKLVTSKFKPPNELEFEKVYMPYILYSKKRYAGQMYTSPDKPDKIDVKGLQVVRRDN 718
Query: 753 CL----LVKNLVTECLHKILVDR-----DIPGAVQYVKSTIS--------DLLMNRMDLS 795
L+KNL+ + +I D ++ +KS IS DL+ + L
Sbjct: 719 SELQRDLMKNLIKTMVKEITQDELTCMDSGASKLEVLKSRISDLVRSYNQDLVQGKFPLE 778
Query: 796 LLVITKGLTKTGDDYEVKAA---------HVELAERMRKRDAATAPNVGDRVPYVIIKAA 846
VI++ ++K G YE A HV+LAERM KR+ T P GDRV Y+I+K A
Sbjct: 779 KYVISQSISKKG--YEKTNAAGFKSAALGHVKLAERMEKREPGTGPVAGDRVHYIIVKEA 836
Query: 847 K---------------GAKAY----ERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
AK + ER EDP YV E N+ +D YYLENQ+ P+ + E
Sbjct: 837 PHLSHIKNRTIDGVTYAAKDWPPRHERCEDPTYVKEKNLTVDLAYYLENQLKNPVTSLLE 896
Query: 888 PILKNASKELLSGD 901
P+ + + L +
Sbjct: 897 PVYDKSEELFLEAE 910
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 155/303 (51%), Gaps = 25/303 (8%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF-HQILEGRMREANRNSKVPQF-- 179
FGVT+EG SV + G PYF+++ P+ + ++ F + ++ +A++N +
Sbjct: 1 FGVTQEGKSVHVAISGVLPYFFVNLPKALNEEECKVFLTKAIKKFESQASQNYGYSSYQI 60
Query: 180 -----VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL---DRGIQLDGL-- 229
+ + V++RSI YQ+ +S +++I+ + P V I D + + +
Sbjct: 61 SESCRIVNCSYVRRRSIWGYQRNESH-YMQILCSNPETVKRAATIFRHWDASLDMQEIFP 119
Query: 230 -GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVG--KYRKTAKTLSYCQLEFDCLYSD 286
G F T+ESNV R D NIV W+++PV K+ + LS+C ++ +S
Sbjct: 120 KGPIVFQTFESNVDPITRLTTDSNIVMSGWVQIPVNDLKWSDSRTRLSHCDIDVAAHFSK 179
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGH-FPEPTH--DPVIQVANLVTLQGEKQPFI 343
+ + PE E ++PF I SFDIEC G FP+P+ D IQ+ +V G+ +P
Sbjct: 180 VQAL-PEKE--DVSPFLIGSFDIECVPEGGRGFPDPSKPLDRCIQIGTIVYRFGDSKPLA 236
Query: 344 RNVMTLKSCA-PIVGVDVMSFETERDVLLAWRDF-IREVDPDVMIGYNICKFDLPYLIEK 401
V L S + + + FE E D+L+AW+ + E+D D++ G+NI KFDL Y+ +
Sbjct: 237 NIVYCLGSASVDDESIHIREFEREEDLLMAWQHLVVHELDLDLLTGHNIFKFDLNYIARR 296
Query: 402 EDV 404
V
Sbjct: 297 AQV 299
>gi|313208726|emb|CBH41139.1| DNA polymerase delta, partial [Taenia multiceps]
Length = 307
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/309 (60%), Positives = 237/309 (76%), Gaps = 12/309 (3%)
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVPI++LL RGQ +KV+SQLLRKA++ L++P + ++ Y G
Sbjct: 1 LMSVANNVEMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPTQRPGQGDE--YVG 58
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDAR----------KLNLP 550
TV+E + GFY +PIATLDF+SLYPSIM+A+NLCY+TL+ PED NL
Sbjct: 59 GTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLKPEDISASGGISGLLANYNLG 118
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
P+ KTP+G FVK +++KG+LP +LE+LL AR RAK ++ D + VLDGRQLAL
Sbjct: 119 PDDYIKTPAGAYFVKKHIRKGLLPCVLEQLLEARTRAKREMVAETDHFRRRVLDGRQLAL 178
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA VG+LPC+EISSS + +GR+MIE TK L+E +FT GY+ +A+VIY
Sbjct: 179 KVSANSVYGFTGAQVGKLPCLEISSSASGFGRKMIEETKLLLEGRFTIENGYKGDAKVIY 238
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVM +FGV TVE AM+LGRE A+YIS F+ PIKLEFEKVY+PYLLI+KKRYAGLY
Sbjct: 239 GDTDSVMCKFGVSTVEEAMQLGREGAEYISSKFVNPIKLEFEKVYFPYLLINKKRYAGLY 298
Query: 731 WTNPEKFDK 739
+T P+K+DK
Sbjct: 299 FTKPDKYDK 307
>gi|313208720|emb|CBH41137.1| DNA polymerase delta, partial [Taenia hydatigena]
Length = 307
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/309 (59%), Positives = 237/309 (76%), Gaps = 12/309 (3%)
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVPI++LL RGQ +KV+SQLLRKAK L++P + ++ Y G
Sbjct: 1 LMLVANNVEMARVTGVPIAYLLKRGQQVKVISQLLRKAKVHGLLLPTQRPGQGDE--YVG 58
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARK----------LNLP 550
TV+E + GFY +PIATLDF+SLYPS+M+A+NLCY+T + PE+ NL
Sbjct: 59 GTVIEPQRGFYNEPIATLDFSSLYPSVMVAHNLCYTTFLKPENISASGGLSSLLAIYNLG 118
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
P+ +TP+G FVK +++KG+LP LE+LL AR +AK ++ D + VLDGRQLAL
Sbjct: 119 PDDYIRTPAGAYFVKKHIRKGLLPCALEQLLEARAKAKREMVTETDHFRRQVLDGRQLAL 178
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA VG+LPC+EISSS++ +GR+MIE T++L+E KFT GY+ +A+VIY
Sbjct: 179 KVSANSVYGFTGAQVGKLPCLEISSSISGFGREMIEETRRLLEGKFTIGNGYKSDAKVIY 238
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVM +FGV TVE AM+LGRE A+YISG F+ PIKLEFEKVY+PYLLI+KKRYAGLY
Sbjct: 239 GDTDSVMCKFGVSTVEEAMRLGREGAEYISGKFLNPIKLEFEKVYFPYLLINKKRYAGLY 298
Query: 731 WTNPEKFDK 739
+T P+K+DK
Sbjct: 299 FTKPDKYDK 307
>gi|340343162|emb|CCA95018.1| DNA polymerase delta, partial [Taenia parva]
Length = 307
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/309 (59%), Positives = 240/309 (77%), Gaps = 12/309 (3%)
Query: 441 LMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG 500
LM + N VEMARVTGVPIS+LL RGQ +KV+SQLLRKAK+ L++P + ++ Y G
Sbjct: 1 LMSVANNVEMARVTGVPISYLLKRGQQVKVISQLLRKAKENGLLLPTHRPGQGDE--YVG 58
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPED-------ARKL---NLP 550
TV+E + GFY +PIATLDF+SLYPSIM+A+NLCY+TL+ PED AR L NL
Sbjct: 59 GTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLLKPEDISASGGIARFLTIYNLG 118
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLAL 610
P+ +TP+G FVK +++KG+LP +LE+LL AR +AK ++ D ++ VLDGRQLAL
Sbjct: 119 PDDYIRTPTGAYFVKKHVRKGLLPCVLEQLLEARTKAKREMVAETDHFKRQVLDGRQLAL 178
Query: 611 KISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIY 670
K+SANSVYGFTGA VG+LPC+E+SSS++ +GR+MIE TK+L+E KFT GY+ +A+VIY
Sbjct: 179 KVSANSVYGFTGAQVGKLPCLELSSSISGFGREMIEETKRLLEGKFTIGNGYKSDAKVIY 238
Query: 671 GDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
GDTDSVM +FGV TV+ AM L RE A+Y+S F+ PIKL+FEKVY+PYLLI+KKRYAGLY
Sbjct: 239 GDTDSVMCKFGVSTVKEAMTLAREGAEYVSARFVNPIKLDFEKVYFPYLLINKKRYAGLY 298
Query: 731 WTNPEKFDK 739
+T P+K DK
Sbjct: 299 FTKPDKHDK 307
>gi|254656363|gb|ACT76276.1| DNA-directed DNA polymerase delta 1 catalytic subunit, partial
[Sebastiscus marmoratus]
Length = 263
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 181/259 (69%), Positives = 211/259 (81%), Gaps = 1/259 (0%)
Query: 633 ISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLG 692
IS SVT +GRQMIE TK+LVE KFT GY+ +A+VIYGDTDSVMV+ GV TV AM +G
Sbjct: 4 ISQSVTGFGRQMIEKTKQLVESKFTIANGYQGDAKVIYGDTDSVMVKLGVATVREAMDIG 63
Query: 693 REAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWT-NPEKFDKMDTKGIETVRRD 751
+EAA++IS F PIKLEFEKVYYPYLLI+KKRYAGLY++ + + +KMD KGIETVRRD
Sbjct: 64 KEAAEWISSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSGSADTHEKMDCKGIETVRRD 123
Query: 752 NCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE 811
NC LV NL+ CL KIL+DRD GAV + K ISDLL NR+D+S LVITK LT+T +Y
Sbjct: 124 NCPLVANLINTCLQKILIDRDPQGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYA 183
Query: 812 VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTH 871
K AHVELA+RMRKRDA +APN+GDRVP VIIKAAKG AY +SEDPI+VLENNIPIDT
Sbjct: 184 GKQAHVELAQRMRKRDAGSAPNLGDRVPCVIIKAAKGVAAYMKSEDPIFVLENNIPIDTQ 243
Query: 872 YYLENQISKPLLRIFEPIL 890
YYLE Q+SKPL+RIFEPIL
Sbjct: 244 YYLEQQLSKPLMRIFEPIL 262
>gi|429962843|gb|ELA42387.1| hypothetical protein VICG_00486 [Vittaforma corneae ATCC 50505]
Length = 380
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/363 (48%), Positives = 240/363 (66%), Gaps = 7/363 (1%)
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR MI TKKL+ED F G+ H+A+VIYGDTDSVM+ F +E ++ ++ + ++
Sbjct: 10 FGRDMISMTKKLIEDNFNLKNGFTHDAQVIYGDTDSVMINFSEKDLEKVFEISKKVSQFV 69
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
S F KPI LEFEKVY PYLLI+KKRYAGL +TNP+K DK+DTKGIETVRRDNC LVK +
Sbjct: 70 SDKFEKPISLEFEKVYSPYLLINKKRYAGLVYTNPQKPDKIDTKGIETVRRDNCELVKTV 129
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ CL+KIL ++++ A YVK + DL +++DLS LVI+K TK+ +Y K AH EL
Sbjct: 130 IENCLNKILFEKNLEAAKNYVKDVVRDLYTDQIDLSQLVISKTFTKS--NYTTKQAHTEL 187
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
AE++RKR + +GDR+PYVI+K K AYE+SEDP+YVLENN+PID YY+E Q+
Sbjct: 188 AEKLRKRGISVG--IGDRIPYVIVKGDKKMAAYEKSEDPVYVLENNLPIDKEYYIEQQLV 245
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLC 939
KP+ R+FEP+++N S L G+HT+ IS + F K + C+GCK LC
Sbjct: 246 KPVQRLFEPVMENVS-SLFHGEHTKVISSGVTMQGPMNMFVKTKDECVGCKK--PGTILC 302
Query: 940 SHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQ 999
+ C+ L+ Q E F W +CQ C GS+ +VLC +R CPIFY R K +
Sbjct: 303 AACRPNFPSLFMAIQHQFNEKTKKFNNCWVECQRCMGSVVNEVLCVNRVCPIFYMRTKVK 362
Query: 1000 KDM 1002
K++
Sbjct: 363 KEL 365
>gi|357542187|gb|AET84947.1| DNA polymerase [Micromonas pusilla virus SP1]
Length = 940
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 212/533 (39%), Positives = 299/533 (56%), Gaps = 40/533 (7%)
Query: 415 GNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQL 474
G+ + +A YC+KD LP +LL K+ + N +EMA+ T VP+ +L+ RGQ IKV SQL
Sbjct: 374 GDPDKLGEVADYCIKDTLLPHKLLKKMCILLNLLEMAKATWVPLCYLVERGQQIKVFSQL 433
Query: 475 LRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLC 534
+KA++ ++P ++ + YEGATVL+A+ G Y PI LDF +LYPSIMMA+NLC
Sbjct: 434 TKKAREMGFMVPTIRYGAIPEEPYEGATVLDAQKGAYYTPITALDFEALYPSIMMAHNLC 493
Query: 535 YSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGI---LPEILEELLAARKRAKADL 591
YST V E N+P G+ K +G+ LP IL EL RK AK D+
Sbjct: 494 YSTYVMDEKNYG-NVPGVTYETFEIGDR--KYKFAQGVESLLPSILLELKQFRKNAKKDM 550
Query: 592 KEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKL 651
A + K V +G+QLA K+S NSVYGFTGA G LPC+ I+S+ T GR MI+ TKK
Sbjct: 551 AAATGSM-KEVYNGKQLAYKVSMNSVYGFTGAGKGILPCVPIASTTTCRGRGMIDETKKY 609
Query: 652 VEDKFTTVGGYEHNAEVIYGDTDSVMVQF------GVPTVEAAMKLGREAADYISGTFIK 705
VE+ F A+V YGDTDSVMV+F GV V+ + ++G AA+ S F K
Sbjct: 610 VEENFP-------GAKVRYGDTDSVMVEFDVGDRKGVDAVKYSWEVGERAAEECSALFKK 662
Query: 706 PIKLEFEKVYYPYLLISKKRYAGLYWTNPE----KFDKMDTKGIETVRRDNCLLVKNLVT 761
P LE EKVY+PY L SKKRYA WT + D +D KG++ VRRDN V+ +
Sbjct: 663 PNNLELEKVYWPYFLYSKKRYAAKLWTKGKDDQMHMDYIDIKGLQVVRRDNTPHVREVCK 722
Query: 762 ECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKT------------GDD 809
E L +L D + K +LL + L++++ L+ T +
Sbjct: 723 ELLDVVLTSSDPGPPRELAKERAIELLSGDVPHEKLILSQSLSDTYKVDGKNVSITSPES 782
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAK-GAKAYERSEDPIYVLENNIPI 868
+ AHV++ +MR+R + P GDRVPY++ K A+A+E+SEDP +V E++IP+
Sbjct: 783 VNINQAHVQVVVKMRERKPGSEPQSGDRVPYLLTKTGDPKARAFEKSEDPKFVEEHDIPV 842
Query: 869 DTHYYLENQISKPLLRIFEPILKNASKELLS---GDHTRSISISTPSNSGIMK 918
D HYY +N+ P+ + EP+ +N +E+ H PS +G+ K
Sbjct: 843 DYHYYFQNKFLNPVCDLLEPLFENTKQEIFGEIIDQHKPPKKKKEPSLTGMKK 895
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 126/285 (44%), Gaps = 24/285 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+I IFG T G S+C F PYF+I + ++ + I E K P+
Sbjct: 19 LISIFGKTESGKSICVTT-SFTPYFFIKLDSRVSAKEL--YKSIDE----------KCPE 65
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V ++ + + +Q + F+KI L R + L G+ YE
Sbjct: 66 CVISYSVMDSKDVWGFQNNQMFRFMKIDFVNLQTRRRVDYFLRRPLHLYSSGLFKAKVYE 125
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SN+ LR M I W++ R ++ D +D + P
Sbjct: 126 SNLDPVLRLMHRTGIQSTGWLDTGDKCIRS-----HLANVDIDLFCNDWTTLTPVNR-DD 179
Query: 299 MAPFRILSFDIECAGRKGHFPEP--THDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
+APF + SFDIEC G FP+ D Q+A + G +P+ + + K+ +
Sbjct: 180 IAPFVVASFDIECNSSTGKFPDADVNGDACFQIAISLCKFGTDEPYEKICLCYKNTS--- 236
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
G DV SF+TER++L A++ +I+E D D++ G+NI FDL Y+ ++
Sbjct: 237 GPDVRSFDTEREMLEAFQKYIQEKDVDIITGWNIFGFDLEYIYKR 281
>gi|428176234|gb|EKX45120.1| DNA polymerase delta catalytic subunit, partial [Guillardia theta
CCMP2712]
Length = 587
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 227/592 (38%), Positives = 331/592 (55%), Gaps = 58/592 (9%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIP--NVKQAG- 492
+L+ +L + N VEMARVTGV I+ L+ Q KVLSQL R + + +IP + ++AG
Sbjct: 1 KLIGELELLINLVEMARVTGVLINELVQHAQQYKVLSQLCRACRDMDYLIPYKHKERAGE 60
Query: 493 -----SEQG--TYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV------ 539
SE G +Y+GATVL A+ G Y PI TLDFASLYPSI++AYNL Y TLV
Sbjct: 61 GSPESSEGGGASYQGATVLNAKTGSYWSPICTLDFASLYPSIIIAYNLSYETLVREPGEQ 120
Query: 540 ---TPEDARKLNLPPECVNKTPSGET---FVKS------NLQKGILPEILEELLAARKRA 587
+ R L N+ G F++S GILP IL LL ARK A
Sbjct: 121 AEADKQRLRTLEFDVSGSNEDQVGGAKFKFIQSWTDPDGREHDGILPRILRRLLKARKDA 180
Query: 588 KADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEH 647
K ++ D K +L+GRQLA KIS NS+YGF GAT G LPC+ ++++VT+ GR +I
Sbjct: 181 KLAMQGQTDQQMKKILNGRQLAYKISCNSIYGFCGATNGYLPCLPLAATVTAIGRDLINR 240
Query: 648 TKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVP-----TVEAAMKLGREAADYISGT 702
T+ L+E FT + A V+YGDTDSVM+ F +P +E AM G+ AA ++ T
Sbjct: 241 TRSLIERDFT--AQHACAATVVYGDTDSVMIDFHLPGSSAKDIEQAMDFGQRAAQAVTKT 298
Query: 703 FIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVT 761
F PIKLEFEKVY PYLL SKKRYAGL + ++ + +K+D KGIETVRRD+C V+ +
Sbjct: 299 FPAPIKLEFEKVYCPYLLFSKKRYAGLMFSSSAQSPEKIDVKGIETVRRDSCPFVQEVYN 358
Query: 762 ECLHKILVDR--DIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
ECL ++ D+ A+ V++ +S+L+ R+ L LV+ + + K G + +A H+EL
Sbjct: 359 ECLEVVMRTSPPDVDKAISLVRTRVSELVEGRVPLVKLVLCRPVGKDGS--KGRAPHMEL 416
Query: 820 AERMRKRDAATAPNVGDRVPY--VIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
+RM +R +P G+R+ Y VI K + + EDP + ++N + +D +Y+ NQ
Sbjct: 417 VKRMNER-GRNSPATGERLQYVQVINSTEKVYRTCDSVEDPAFAVKNELNVDYEWYVNNQ 475
Query: 878 ISKPLLRIFEPILKNASKELLS------GDHTRSISISTPSNSGIMKFAKRQLSCIGCKA 931
+ P++++FE ++ NA + G R I PS++ + + + CIGC
Sbjct: 476 LKNPIVKLFEVLVPNAEARIFGHSSRSMGSGVRLIKHFQPSSNIMRNYIIKGHKCIGCSK 535
Query: 932 LISNGT---------LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQEC 974
++ + LCS C+ + + + + E + LW QCQ C
Sbjct: 536 SVTQSSAQSDKPPRILCSDCEADKEDHVLAAQASLIETQHSRNALWKQCQLC 587
>gi|163955212|ref|YP_001648316.1| hypothetical protein OsV5_240f [Ostreococcus virus OsV5]
gi|163638661|gb|ABY28020.1| hypothetical protein OsV5_240f [Ostreococcus virus OsV5]
Length = 957
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 215/525 (40%), Positives = 295/525 (56%), Gaps = 36/525 (6%)
Query: 421 RRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
R +A YC+KD LP RL+ KL + N VEMA+ T VP +FL+ RGQ IKV SQL +KA++
Sbjct: 392 REVAEYCIKDTLLPHRLMKKLCTLLNMVEMAKATWVPANFLVERGQQIKVFSQLTKKARE 451
Query: 481 KNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT 540
++P ++ + YEGATVLEA+ G Y PI LDF +LYPSIMMA+NLCYS+ V
Sbjct: 452 LGFMVPTIRYGAIPEEPYEGATVLEAQKGAYYTPITALDFEALYPSIMMAHNLCYSSYVM 511
Query: 541 PEDARKLNLPPECVNKTPSGE-TFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE 599
E R ++P G+ T+ + +LP IL EL RK+AK D+ A +
Sbjct: 512 DE-KRYGSVPGITYETFNIGDRTYKFAQDVPSLLPAILAELKQFRKQAKRDMAAATGFM- 569
Query: 600 KAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTV 659
K V +G+QLA K+S NSVYGFTGA G LPC+ I+S+ TS GR MIE TK VE F
Sbjct: 570 KEVYNGKQLAYKVSMNSVYGFTGAGKGILPCVPIASTTTSKGRSMIEETKNYVEKNFP-- 627
Query: 660 GGYEHNAEVIYGDTDSVMVQF------GVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
A+V YGDTDSVMV+F G + + ++G AA+ S F KP LE EK
Sbjct: 628 -----GAKVRYGDTDSVMVEFDVGDRKGEEAIAYSWEVGERAAEECSALFKKPNNLELEK 682
Query: 714 VYYPYLLISKKRYAGLYWTNPE----KFDKMDTKGIETVRRDNCLLVKNLVTECLHKILV 769
VY+PY L SKKRYA WT + D +D KG++ VRRDN V+ + E L IL
Sbjct: 683 VYWPYFLYSKKRYAAKLWTKGKDGKMHMDYIDIKGLQVVRRDNTPHVREVCKELLDVILT 742
Query: 770 DRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKT------------GDDYEVKAAHV 817
D + K +LL + L++++GL+ T D + +HV
Sbjct: 743 SSDPGPPKELAKERAIELLSGDVPNDKLILSQGLSDTYKVGGKNVSVTSADSVNINQSHV 802
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAK-GAKAYERSEDPIYVLENNIPIDTHYYLEN 876
++ +MR+R + P GDRVPY++ K AKAYE++EDP YV E+ +P+D HYY N
Sbjct: 803 QVVTKMRQRKPGSEPQSGDRVPYLLTKTQDPKAKAYEKAEDPKYVEEHGVPVDYHYYFLN 862
Query: 877 QISKPLLRIFEPILKNASKELLS---GDHTRSISISTPSNSGIMK 918
+ P+ + +P+ +N +++ H PS SG+ K
Sbjct: 863 KFLNPVCDLLDPLYENVKEDIFGEIINAHKPVKPPKLPSLSGMKK 907
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 155/341 (45%), Gaps = 29/341 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+I IFG T EG SVC F PYF+I P+ + I + IL+ + +++
Sbjct: 19 LISIFGKTEEGKSVCLTT-AFTPYFFIKLPEKIDAGKIRRIYNILDEKCKDS-------- 69
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKI----VVALPTMVASCRGILDRGIQL-DGLGMKS 233
+ +++ + + +Q + F+K+ + A + + R LDR +L + G+++
Sbjct: 70 -LVAYSVMKSKDVWGFQNNEEFVFMKVNFKHLQARRLVDSFLRKPLDRTPELFNIFGVRN 128
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPE 293
YESN+ LR M I W++ R +++ D +D + P
Sbjct: 129 VKVYESNLDPVLRLMHRTGIQSTGWLDTGDKCIRS-----HLARVDLDLFCNDWTTLKPV 183
Query: 294 GEFSKMAPFRILSFDIECAGRKGHFPEP--THDPVIQVANLVTLQGEKQPFIRNVMTLKS 351
+APF + S DIEC G FP+ T D Q+A + G +P+ + + K
Sbjct: 184 AR-DDIAPFVVASVDIECNSSTGKFPDADVTGDACFQIAISLCKFGSDEPYDKTCLCYKK 242
Query: 352 CAP-IVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIIS 410
P + G + S+ETER++L A++ ++ D D++ G+NI FD+ Y+ ++ V+
Sbjct: 243 TDPNLEGSTIRSYETEREMLEAFQKYLHTKDVDIITGWNIFGFDMEYIYKRAQVNRCHYE 302
Query: 411 DLQNGNA-ETRRRLAVYCLKDAYLPQRLLDKL----MFIFN 446
G +T L + L + L LL L FIF+
Sbjct: 303 FFNLGKLRDTESELVIKKLSSSALGDNLLKLLPMPGRFIFD 343
>gi|218185389|gb|EEC67816.1| hypothetical protein OsI_35393 [Oryza sativa Indica Group]
Length = 194
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 169/194 (87%), Positives = 182/194 (93%), Gaps = 2/194 (1%)
Query: 823 MRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPL 882
MRKRDAATAP VGDRVPYVIIKAAKGAKAYERSEDPIYVL+NNIPID YYLENQISKPL
Sbjct: 1 MRKRDAATAPTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNNIPIDPQYYLENQISKPL 60
Query: 883 LRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--SNGTLCS 940
LRIFEPILKNAS+ELL G HTR++SISTPSNSGIMKFAK+QL+C+GCKA+I SN TLCS
Sbjct: 61 LRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLTCLGCKAVISGSNQTLCS 120
Query: 941 HCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQK 1000
HCKGREAELYCKTV V ELE+LFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR+KAQK
Sbjct: 121 HCKGREAELYCKTVGNVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRRKAQK 180
Query: 1001 DMAEAKLQLDRWNF 1014
DMAEA++QL RW+F
Sbjct: 181 DMAEARVQLQRWDF 194
>gi|340343164|emb|CCA95019.1| DNA polymerase delta, partial [Taenia taeniaeformis]
Length = 292
Score = 358 bits (919), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 173/294 (58%), Positives = 229/294 (77%), Gaps = 12/294 (4%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARA 508
EMARVTGVP+++LL RGQ +KV+SQLLRK+K+ L++P + ++ Y G TV+E +
Sbjct: 1 EMARVTGVPMAYLLKRGQQVKVISQLLRKSKENGLLLPTHRSGQGDE--YVGGTVIEPQR 58
Query: 509 GFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARK----------LNLPPECVNKTP 558
GFY +PIATLDF+SLYPSIM+A+NLCY+TL+ PED NL P+ +TP
Sbjct: 59 GFYNEPIATLDFSSLYPSIMVAHNLCYTTLLKPEDISASGGIVHLLATYNLGPDDYIRTP 118
Query: 559 SGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVY 618
+G FVK +++KG+LP +LE+LL AR +AK ++ D + VLDGRQLALK+SANSVY
Sbjct: 119 TGAYFVKKHIRKGLLPCVLEQLLEARTKAKREMVAENDNFRRQVLDGRQLALKVSANSVY 178
Query: 619 GFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMV 678
GFTGA VG+LPC+E+SSS++ +GR+MIE TK+L+E++FT GY+ +A+VIYGDTDSVM
Sbjct: 179 GFTGAQVGKLPCLELSSSISGFGREMIEETKRLLEEEFTIKNGYKSDAKVIYGDTDSVMC 238
Query: 679 QFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWT 732
+FGV TVE AM L R+ A+YISG F+KPIKL+FEKVY+PYLLI+KKRYAGLY+T
Sbjct: 239 KFGVSTVEEAMALARKGAEYISGKFLKPIKLDFEKVYFPYLLINKKRYAGLYFT 292
>gi|313844188|ref|YP_004061851.1| hypothetical protein OlV1_219 [Ostreococcus lucimarinus virus OlV1]
gi|312599573|gb|ADQ91595.1| hypothetical protein OlV1_219 [Ostreococcus lucimarinus virus OlV1]
Length = 960
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 212/526 (40%), Positives = 293/526 (55%), Gaps = 38/526 (7%)
Query: 421 RRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
R +A YC+KD LP +L+ KL + N VEMA+ T VP +FL+ RGQ IKV SQL +KA++
Sbjct: 392 REVAEYCIKDTLLPHKLMKKLCTLLNLVEMAKATWVPANFLVERGQQIKVFSQLTKKARE 451
Query: 481 KNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT 540
++P ++ + YEGATVLEA+ G Y PI LDF +LYPSIMMA+NLCYS+ V
Sbjct: 452 LGFMVPTIRYGAIPEEPYEGATVLEAQKGAYYTPITALDFEALYPSIMMAHNLCYSSYVM 511
Query: 541 PEDARKLNLPPECVNKT--PSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPL 598
D +K P +T + T+ + +LP IL EL RK+AK D+ A +
Sbjct: 512 --DEKKYGNVPGITYETFRVADRTYKFAQDVPSLLPAILLELKQFRKQAKRDMANATGFM 569
Query: 599 EKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTT 658
K V +G+QLA KIS NSVYGFTGA G LPC+ I+S+ T GR MIE TK VE F
Sbjct: 570 -KEVYNGKQLAYKISMNSVYGFTGAGKGILPCVPIASTTTCKGRSMIEETKNYVEANFP- 627
Query: 659 VGGYEHNAEVIYGDTDSVMVQF------GVPTVEAAMKLGREAADYISGTFIKPIKLEFE 712
A+V YGDTDSVMV+F G + + ++G AA+ S F KP LE E
Sbjct: 628 ------GAKVRYGDTDSVMVEFDVGDRKGEDAIAYSWEVGERAAEECSALFKKPNNLELE 681
Query: 713 KVYYPYLLISKKRYAGLYWTNPE----KFDKMDTKGIETVRRDNCLLVKNLVTECLHKIL 768
KVY+PY L SKKRYA WT + D +D KG++ VRRDN V+ + E L +L
Sbjct: 682 KVYWPYFLYSKKRYAAKLWTKGKDDKMHMDYIDIKGLQVVRRDNTPHVREVCKELLDVVL 741
Query: 769 VDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKT------------GDDYEVKAAH 816
D + K +LL + L++++GL+ T + + +H
Sbjct: 742 TSSDPGPPKELAKERAIELLSGDVPNEKLILSQGLSDTYKVGGKNVSVTSSESVNINQSH 801
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAK-GAKAYERSEDPIYVLENNIPIDTHYYLE 875
V++ +MR+R + P GDRVPY++ K AKAYE++EDP YV E+ + +D HYY
Sbjct: 802 VQVVTKMRQRKPGSEPQSGDRVPYLLTKTENPKAKAYEKAEDPKYVEEHGVHVDYHYYFV 861
Query: 876 NQISKPLLRIFEPILKNASKELLS---GDHTRSISISTPSNSGIMK 918
N+ P+ + +P+ +N +E+ H PS SG+ K
Sbjct: 862 NKFLNPVCDLLDPLYENVKEEIFGEIINQHKPVKPPKLPSLSGMKK 907
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 153/341 (44%), Gaps = 29/341 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+I IFG T EG SVC F PYF+I P + I + IL+ + +++
Sbjct: 19 MISIFGKTEEGKSVCLTT-AFTPYFFIKLPPNIDTAKIQRIYNILDEQCKDS-------- 69
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKI----VVALPTMVASCRGILDRGIQL-DGLGMKS 233
+ + + + + +Q + PF+KI + A + R LDR +L + G+++
Sbjct: 70 -LVGYSVTKSKDVWGFQNNEEFPFMKINFKNLQARRLTDSFLRRPLDRTPELFNIFGVRN 128
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPE 293
YESN+ LR M I W+E R ++ D +D + P
Sbjct: 129 VKVYESNLDPVLRLMHRTGIQSTGWLETGDKCIRS-----HLANVDMDLFCNDWTTLKPV 183
Query: 294 GEFSKMAPFRILSFDIECAGRKGHFPEPT--HDPVIQVANLVTLQGEKQPFIRNVMTLKS 351
+APF + S DIEC G FP+ D Q+A + G +P+ + + K
Sbjct: 184 AR-DDVAPFVVASVDIECNSSTGKFPDANIPGDACFQIAISLCKFGSDEPYDKTCLCYKQ 242
Query: 352 CAP-IVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIIS 410
P + G +++SF TE+++L A+ ++ + D D++ G+NI FD+ Y+ ++ ++ S
Sbjct: 243 TDPNLEGSNILSFSTEKEMLEAFHKYLHKKDVDIITGWNIFGFDMEYIYKRAQINGCHYS 302
Query: 411 DLQNGN-AETRRRLAVYCLKDAYLPQRLLDKL----MFIFN 446
G +T L + L + L LL L FIF+
Sbjct: 303 FFNLGKLKDTESELVIKKLSSSALGDNLLKLLPMSGRFIFD 343
>gi|68478001|ref|XP_717004.1| hypothetical protein CaO19.5182 [Candida albicans SC5314]
gi|68478136|ref|XP_716937.1| hypothetical protein CaO19.12649 [Candida albicans SC5314]
gi|46438626|gb|EAK97954.1| hypothetical protein CaO19.12649 [Candida albicans SC5314]
gi|46438697|gb|EAK98024.1| hypothetical protein CaO19.5182 [Candida albicans SC5314]
Length = 678
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 174/258 (67%), Positives = 211/258 (81%), Gaps = 1/258 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNG ETRRRLAVYCLKDA+LP RLLDKLM + NY EMARVTGVP S
Sbjct: 419 QKEDVQHSIITDLQNGTKETRRRLAVYCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFS 478
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ IKV+SQL RK Q+++VIPN+K GS + YEGATV+E G+Y+ PIATLD
Sbjct: 479 YLLSRGQQIKVISQLFRKCLQEDIVIPNLKSEGSNE-EYEGATVIEPERGYYDVPIATLD 537
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ + L + KTP+G+ FV SNL+KGILP IL+E
Sbjct: 538 FSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTEDDYTKTPNGDYFVHSNLRKGILPTILDE 597
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL ARK+AKADLK+ DP +K VL+GRQLALKISANSVYGFTGATVG+LPC+ ISSSVT+
Sbjct: 598 LLTARKKAKADLKKETDPFKKDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVTA 657
Query: 640 YGRQMIEHTKKLVEDKFT 657
+GR+MIE TK V++ ++
Sbjct: 658 FGREMIEKTKNEVQEYYS 675
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 181/327 (55%), Gaps = 32/327 (9%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W RPPL S + + I FQQLD + N R FG+T+EGHSV C
Sbjct: 49 WDRPPLPSSF----EDISFQQLDAEEYHDRGN-----------TYARFFGITQEGHSVLC 93
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V GF YFY P+G ++++ F L+ R +E+ K SI Y
Sbjct: 94 NVTGFIHYFYCPVPKGF-EENLTEFTNYLKATFDGIER----------VEITSKESIWGY 142
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIV 254
F KI ++ R G Q+ + +TY+ N+ + LR MIDC I
Sbjct: 143 SNNIKTSFFKIFAK--NNISKIRSAFQNG-QVHNI--DPCITYD-NINYLLRLMIDCKIT 196
Query: 255 GGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGR 314
G +WI +P KY+ +S CQ+E Y D+IS PEGE+ KMAP RILSFDIECAGR
Sbjct: 197 GMSWITLPRDKYKIVNNKISTCQIECSIDYRDLISHPPEGEWLKMAPLRILSFDIECAGR 256
Query: 315 KGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWR 374
KG FPE HDPVIQ+AN+V GE +PF+RNV T+ +C+ I+G + + E D+L+ W+
Sbjct: 257 KGVFPEAEHDPVIQIANVVQKSGESKPFVRNVFTVNTCSSIIGSQIFEHQREEDMLMHWK 316
Query: 375 DFIREVDPDVMIGYNICKFDLPYLIEK 401
+FI +VDPDV+IGYN FD+PY++ +
Sbjct: 317 EFITKVDPDVIIGYNTANFDIPYVLNR 343
>gi|294890775|ref|XP_002773308.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878360|gb|EER05124.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 609
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 215/560 (38%), Positives = 303/560 (54%), Gaps = 91/560 (16%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
+W R P+ + +++ S+ F Q+D+D + R P+ +G +IR+FGVT G+S+
Sbjct: 24 EWKRKPVPADALTK--SLAFMQVDVDN-YSAAPRACDPIQNGEVPVIRMFGVTATGNSLM 80
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR--EANRNSKVPQFVRHIEMVQKRSI 191
C +HGF PYFY CP+ D F LE +R + S+ Q V +E+V + ++
Sbjct: 81 CHIHGFLPYFY--CPRPDQTVDCERFQTRLESALRGSQTASGSRCKQLVTSVEIVVRENL 138
Query: 192 M-YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQ-LDGLGMKSFMTYESNVLFALRFMI 249
M + + + + ++ VALP +++ RG+L+RGI L G + + T+E+N+ + LRFMI
Sbjct: 139 MGWTGRNTASEYFRVTVALPKFISTSRGVLERGIPVLQGDALWNCTTFETNIPYPLRFMI 198
Query: 250 DCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCL-YSDIISRHPEGEFSKMAPFRILS 306
D +I GG+W+E+P G Y R + +S CQ+E D Y II EG++ +AP R++S
Sbjct: 199 DNDIGGGSWVELPAGSYTSRTDSDRVSTCQIEVDVQDYRQIIGHMAEGDWMALAPLRVVS 258
Query: 307 FDIECAGRKGH-FPEPTHDPVIQV--------------------------ANLVTLQGEK 339
FDIEC G FP P PVIQ+ A +V+ Q EK
Sbjct: 259 FDIECVSEHGKGFPTPDVAPVIQIAAVMQEGTEQKHKVVWTLDTCADIADATVVSFQSEK 318
Query: 340 QPF--IRNVMTLKSCAPIVGVDVMSFETE----------------------------RDV 369
+ M L + G ++++F+ +D
Sbjct: 319 DLLSSFQQYMVLVDPDVVTGYNIINFDFPYLLDRSAHLKVHPPFEYLGRLRGVASKVKDS 378
Query: 370 LLAWRDFIREVDPDVMI-------------------GYNICKFDLPYLIE-KEDVHHSII 409
+ R R + D+ I Y++ +L E KEDVH+SII
Sbjct: 379 VFESRALGRRENKDINIEGRVQFDMLIVMQREHKLRSYSLNAVSAEFLGEQKEDVHYSII 438
Query: 410 SDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIK 469
DLQ G ETR+RLAVYCLKDA LP RL++KL+ ++NY EMARVTGVPI++LL+RGQ IK
Sbjct: 439 GDLQKGTPETRKRLAVYCLKDALLPLRLMNKLVCMYNYTEMARVTGVPINYLLTRGQMIK 498
Query: 470 VLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMM 529
V SQL RKA+ VIP Q S G YEGATVL+ GFY+ PIATLDFASLYPSIM
Sbjct: 499 VASQLFRKARSHGYVIP--AQKSSPGGEYEGATVLDPSTGFYQNPIATLDFASLYPSIMQ 556
Query: 530 AYNLCYSTLVTPEDARKLNL 549
A+NLCYSTLV P A++ NL
Sbjct: 557 AHNLCYSTLVQPSVAQRENL 576
>gi|312599333|gb|ADQ91356.1| hypothetical protein BpV2_189 [Bathycoccus sp. RCC1105 virus BpV2]
Length = 907
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/504 (40%), Positives = 292/504 (57%), Gaps = 42/504 (8%)
Query: 421 RRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
R +A YC+KD LP RLL KL + N +EMA+ T VP+ +L+ RGQ IKV S L +KA++
Sbjct: 384 REVAEYCIKDTLLPHRLLSKLSILVNLLEMAKATWVPLCYLVERGQQIKVFSLLTKKARE 443
Query: 481 KNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT 540
++P + YEGATVL+A+ G Y +PI LDF LYPSIMMA+NLCYS++V
Sbjct: 444 MGFMVPTISWGQYSADGYEGATVLDAQKGAYYRPITALDFEGLYPSIMMAHNLCYSSMVM 503
Query: 541 PEDARKLNLPPECVNKTPSGETFVKSNLQKGI---LPEILEELLAARKRAKADLKEAKDP 597
D++ N+P + ETF + + LP IL EL RK+AK D+ ++
Sbjct: 504 --DSKYENIP------GITYETFGFYKFAQDVPSLLPSILLELKQFRKQAKKDMAQSTGA 555
Query: 598 LEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFT 657
L K + +G+QLA K+S NSVYGFTGA+ G LPC++I+S+VT GR MI+ TK VE F
Sbjct: 556 L-KEMYNGKQLAYKVSMNSVYGFTGASKGMLPCVQIASTVTLKGRSMIDETKAYVEKNFP 614
Query: 658 TVGGYEHNAEVIYGDTDSVMVQF------GVPTVEAAMKLGREAADYISGTFIKPIKLEF 711
A+V YGDTDSVMV+F G +E + ++G AA+ + F P LE
Sbjct: 615 -------GAKVRYGDTDSVMVEFDVGNRTGKEAIEYSWEIGERAAEECTKLFKAPNNLEL 667
Query: 712 EKVYYPYLLISKKRYAGLYWTNPE----KFDKMDTKGIETVRRDNCLLVKNLVTECLHKI 767
EKVY PY L SKKRYA WT + D +D KG++ VRRDN ++ + E L +
Sbjct: 668 EKVYCPYFLYSKKRYAAKLWTKGKDGNMNMDYIDVKGLQLVRRDNTPHMREVCKELLDVV 727
Query: 768 LVDRD--------IPGAVQYVKSTI-SDLLMNRMDLSLLVITKGLT---KTGDDYEVKAA 815
L D + A++ ++ + ++ L+ LS KGL+ + D ++ A
Sbjct: 728 LESSDTGPPKALALQRAIELIEGDVPNEKLILSQGLSDSYKAKGLSVSINSPDIKDINQA 787
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAK-GAKAYERSEDPIYVLENNIPIDTHYYL 874
HV++ +MR+R + P GDRVPY++I AKA+E+SEDP Y +NN+ ID +YY
Sbjct: 788 HVQVVRKMRERQPGSEPQSGDRVPYILIDTGDPKAKAFEKSEDPKYAKDNNLKIDYNYYF 847
Query: 875 ENQISKPLLRIFEPILKNASKELL 898
N+ P+ + EP+ ++ +E+
Sbjct: 848 INKFLNPVCDLIEPLFEDPKEEIF 871
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 22/286 (7%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+I IFG T+EG SVC F PYF++ P+ D+ + + ++ P+
Sbjct: 19 LISIFGKTKEGKSVCVTT-SFTPYFFLKLPKKTSQLDVRNLYTKID---------KTCPE 68
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
+ ++VQ + + +Q + F+++ G L R + + + K YE
Sbjct: 69 CLISYDIVQSKDVWGFQNNEKFIFMQLNFKNLAARRMVNGRLKRTLPDESVKYK---VYE 125
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SN+ LR M NI W++ R L++ ++ C +D + P + +
Sbjct: 126 SNLDPVLRLMHRTNIQSTGWMDTGDACVRSH---LAHVNIDLFC--NDWKTLKPV-DIPE 179
Query: 299 MAPFRILSFDIECAGRKGHFPEP--THDPVIQVANLVTLQGEKQPFIRNVMTLKSC-API 355
APF + S DIEC G FP+ D Q+A +T G P+ + K + +
Sbjct: 180 TAPFVVASVDIECNSSTGKFPDADVKGDACFQIAVSLTHFGSDVPYDKTCFCYKKTDSNL 239
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
G + S++TER++L+A++D++ E D D++ G+NI FDL Y++++
Sbjct: 240 DGCIIKSYDTEREMLMAFKDYLMEKDIDIITGWNIFGFDLEYIMKR 285
>gi|397619625|gb|EJK65339.1| hypothetical protein THAOC_13811 [Thalassiosira oceanica]
Length = 307
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 166/305 (54%), Positives = 221/305 (72%), Gaps = 13/305 (4%)
Query: 721 ISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYV 780
++KKRYAGL WT +K+D MDTKG+ETVRRDNC LV+ ++ L KI+++R++PGA+ YV
Sbjct: 1 MNKKRYAGLMWTEKDKYDYMDTKGLETVRRDNCALVREVIQTSLDKIIIERNVPGAIDYV 60
Query: 781 KSTISDLLMNRMDLSLLVITKGLTK----------TGDDYEVKAAHVELAERMRKRDAAT 830
KS I+DLL N+MD+S LVITK L K +DY+VK AHVELA RMRKRDA +
Sbjct: 61 KSQIADLLQNKMDISRLVITKSLNKGAEYALGLGGKAEDYKVKQAHVELAARMRKRDAGS 120
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL 890
AP +GDRVPYVII AAK AK YE++EDPI+VLEN+IPID +YL NQ+SKPL RIFEPI+
Sbjct: 121 APQMGDRVPYVIINAAKDAKTYEKAEDPIWVLENDIPIDFMWYLTNQLSKPLTRIFEPII 180
Query: 891 KNASKELLSGDHTRSISISTP--SNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAE 948
N K+LL GDHTR I TP + +M FAK++ +C+GCKA I G LC +C+ +EAE
Sbjct: 181 DNVDKKLLKGDHTRKIFKPTPKATKGSLMMFAKKKATCMGCKAGIEEGNLCEYCQPKEAE 240
Query: 949 LYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPI-FYRRKKAQKDMAEAKL 1007
+Y ++ ++E E+ + LW++ Q G+LH D++CT C FYRRKK Q D+ A+
Sbjct: 241 IYLDKLNCLKESELRYAYLWSEAQRIHGTLHTDIMCTGDGCACQFYRRKKVQADIRLAQE 300
Query: 1008 QLDRW 1012
Q+D++
Sbjct: 301 QVDKF 305
>gi|435850447|ref|YP_007312033.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
gi|433661077|gb|AGB48503.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
Length = 903
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 278/901 (30%), Positives = 431/901 (47%), Gaps = 164/901 (18%)
Query: 93 FQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMG 152
FQ LD DYV D+ A ++R+FG +G SVCC V GFEPYFY++
Sbjct: 3 FQILDADYVTEDT-----------APVVRLFGRAEDGKSVCCYVPGFEPYFYVNAS---- 47
Query: 153 PDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM 212
D++ ++++ R V+++E+VQ+ + YQ+ K + +++ P
Sbjct: 48 -DELDLICKLIKERF----------DVVKNVEIVQRFEPVGYQKSK-KSMIQVTTYEPRH 95
Query: 213 VASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV-PVGKYRKTAK 271
V R D +Q+ G+ YE+++LF RF+ID + G W+ V P + + K
Sbjct: 96 VPEIR---DDILQIPGV----MEVYETDILFRNRFLIDRELHGMGWVSVSPSQEAHQGGK 148
Query: 272 TLSYCQLEFDCLYSDIISRHPEGEFSKM--APFRILSFDIECAGRKGHFPEPTHDPVIQV 329
YC CL R P E K+ AP + LSFDIEC G P P PVI +
Sbjct: 149 I--YCDTV--CL-----DRQP-AEVDKLPNAPLKFLSFDIECLPIGGSMPSPDESPVIMI 198
Query: 330 A-------------------------NLVTLQGEKQPFIRNVMTLKSCAP--IVGVDVMS 362
+ ++ +LQ E+ R L+ P ++G ++
Sbjct: 199 SLTFAPAYNGHDSIVLVAKPVSGAGPDVESLQNEESMLKRFFEILRDYDPDILIGYNIND 258
Query: 363 FE----TERDVLLA----------WRD--------------------FIREVDPDVMIGY 388
F+ ++R LA RD + +V P V +
Sbjct: 259 FDIPYISDRIKFLADSGTNINSGSGRDGRPMSYRKIGTMTMISMAGRVVVDVLPLVRSQF 318
Query: 389 NICKFDLPYLI------EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLM 442
++ ++ L + EK DV S + D N E + Y +D+ L L+ KL
Sbjct: 319 SLKRYTLRNVAKELLDREKLDVAPSEMEDHWNDEGEKLLKFIDYARRDSELAMELVMKLQ 378
Query: 443 FIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPN------VKQAGSEQG 496
+ Y+ ++RV+G + ++ GQ+ V + LLR+ + ++ VIP V
Sbjct: 379 LLDRYIAISRVSGSLLQEVIDGGQTSMVENLLLRECRIRDRVIPPKPDDNLVYSRNKNSE 438
Query: 497 TYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNK 556
+G VLE + G E + LD+ SLYP+IMMA+NLCYST+V + ++P E
Sbjct: 439 GLKGGEVLEPKKGLLEN-VVILDYKSLYPTIMMAHNLCYSTVV------EKDIPGEGETI 491
Query: 557 TP-SGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISAN 615
TP SG FV +++ KGI+P ILE LL R K +K+ + E LD QLA+KI N
Sbjct: 492 TPPSGGRFVTADVSKGIMPAILENLLNRRIETKKRMKDISNEDEYKALDATQLAMKILLN 551
Query: 616 SVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNA--------- 666
S YG+ G T +L + ++++VTS+GR+ I T+ L+ED T+ + N+
Sbjct: 552 SFYGYAGYTRARLYSLTLANAVTSFGRENILTTRSLIEDTIHTIYLKDGNSYLQSEIASD 611
Query: 667 --------EVIYGDTDSVMVQFGVPT---VEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
V+YGDTDSV VQ T +E A +G++ + +S + P++LEFE +
Sbjct: 612 PLNKDISLSVVYGDTDSVFVQCTGKTEISLEDAELVGKKISGIVSASLPDPMELEFESIA 671
Query: 716 YPYLLISKKRYAGLYWTNPEKF-----DKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
L I+KKRYA W E+F D + KG+ETVRRD C L + L +L
Sbjct: 672 KRALFIAKKRYA--IWVF-ERFGDGWKDGIKVKGMETVRRDWCELTSKTLNRVLELVLKA 728
Query: 771 RDIPGAVQYVKSTIS-----DLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRK 825
++ AVQ+V+ + D+ +R + L +T+ +K + Y+ K H+ +AE+M +
Sbjct: 729 GEVEAAVQHVRKVVDSIRNLDVTKDRDIIDDLTMTRMYSKRREHYKNKQPHITVAEKMEQ 788
Query: 826 RDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRI 885
R + P VG+R+P+VII A R+EDP YV ENN+PID YY++ QI P+ RI
Sbjct: 789 R-TGSLPPVGERIPFVII--AGKDLFVNRAEDPEYVRENNVPIDVDYYVKKQILPPVERI 845
Query: 886 F 886
Sbjct: 846 L 846
>gi|313768183|ref|YP_004061614.1| hypothetical protein BpV1_184 [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599790|gb|ADQ91811.1| hypothetical protein BpV1_184 [Bathycoccus sp. RCC1105 virus BpV1]
Length = 907
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 199/510 (39%), Positives = 289/510 (56%), Gaps = 42/510 (8%)
Query: 421 RRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
R +A YC+KD LP RLL KL + N +EMA+ T VP+ +L+ RGQ IKV S L +KA++
Sbjct: 384 REVAEYCIKDTLLPHRLLSKLSILVNLLEMAKATWVPLCYLVERGQQIKVFSLLTKKARE 443
Query: 481 KNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT 540
++P + YEGATVL+A+ G Y PI LDF LYPSIMMA+NLCYS++V
Sbjct: 444 MGFMVPTISWGQYSAEGYEGATVLDAQKGAYYTPITALDFEGLYPSIMMAHNLCYSSMVM 503
Query: 541 PEDARKLNLPPECVNKTPSGETFVKSNLQKGI---LPEILEELLAARKRAKADLKEAKDP 597
D++ N+P + ETF + + LP IL EL RK+AK D+ ++
Sbjct: 504 --DSKYENIP------GITYETFGFYKFAQDVPSLLPSILLELKQFRKQAKKDMAQSTGA 555
Query: 598 LEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFT 657
L K + +G+QLA K+S NSVYGFTGA+ G LPC++I+S+VT GR MI+ TK VE F
Sbjct: 556 L-KEMYNGKQLAYKVSMNSVYGFTGASKGMLPCVQIASTVTLKGRSMIDETKAYVEKNFP 614
Query: 658 TVGGYEHNAEVIYGDTDSVMVQF------GVPTVEAAMKLGREAADYISGTFIKPIKLEF 711
++V YGDTDSVMV+F G +E + ++G AA+ + F P LE
Sbjct: 615 -------GSKVRYGDTDSVMVEFDVGNRTGKEAIEYSWEIGERAAEECTKLFKAPNNLEL 667
Query: 712 EKVYYPYLLISKKRYAGLYWTNPE----KFDKMDTKGIETVRRDNCLLVKNLVTECLHKI 767
EKVY PY L SKKRYA WT + D +D KG++ VRRDN ++ + E L +
Sbjct: 668 EKVYCPYFLYSKKRYAAKLWTKGKDGNMNMDYIDVKGLQLVRRDNTPHMREVCKELLDVV 727
Query: 768 LVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT------------KTGDDYEVKAA 815
L D + +L+ + L++++GL+ + D ++ A
Sbjct: 728 LESSDTGPPKELALQRAIELIEGDVPNEKLILSQGLSDSYKSKGFAVSINSPDIKDINQA 787
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAK-GAKAYERSEDPIYVLENNIPIDTHYYL 874
HV++ +MR+R + P GDRVPY+++ AKA+E+SEDP Y +NN+ +D +YY
Sbjct: 788 HVQVVRKMRERQPGSEPQSGDRVPYILLDTGDPKAKAFEKSEDPKYAKDNNLKVDYNYYF 847
Query: 875 ENQISKPLLRIFEPILKNASKELLSGDHTR 904
N+ P+ + EP+ ++ +E+ TR
Sbjct: 848 INKFLNPVCDLIEPLFEDPKEEIFGELLTR 877
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 22/286 (7%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+I IFG T+EG SVC F PYF++ P DI + + ++ P+
Sbjct: 19 LISIFGKTKEGKSVCVTT-SFTPYFFVKLPNKKTQMDIRNLYTKID---------KLCPE 68
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
+ ++VQ + + +Q + F+++ G L R + + + K YE
Sbjct: 69 CLISYDIVQSKDVWGFQNNEKFIFMQLKFKNLAARRMVNGRLKRTLPDEAMKYK---VYE 125
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SN+ LR M NI W++ R L++ ++ C +D + P + +
Sbjct: 126 SNLDPVLRLMHRTNIQSTGWMDSGDACVRSH---LAHVNIDLFC--NDWKTLKPV-DIPE 179
Query: 299 MAPFRILSFDIECAGRKGHFPEP--THDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP-I 355
APF + S DIEC G FP+ D Q+A +T G P+ + K P +
Sbjct: 180 TAPFVVASVDIECNSSTGKFPDADVKGDACFQIAVSLTHFGSDIPYDKTCFCYKKTDPNL 239
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
G + S+ETER++L+A+++++ E D D++ G+NI FDL Y+I++
Sbjct: 240 EGSIIKSYETEREMLMAFKEYLMEKDIDIITGWNIFGFDLEYIIKR 285
>gi|357464725|ref|XP_003602644.1| DNA polymerase [Medicago truncatula]
gi|355491692|gb|AES72895.1| DNA polymerase [Medicago truncatula]
Length = 320
Score = 339 bits (869), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 172/229 (75%), Positives = 179/229 (78%), Gaps = 42/229 (18%)
Query: 826 RDAATAPNVGDRVPYVIIKAAKGAK-------------AYERSEDPIYVLENNIPIDTHY 872
RDAATAPNVGDRVPYVIIKAAKGAK AYERSEDPIYVLENNIPID Y
Sbjct: 56 RDAATAPNVGDRVPYVIIKAAKGAKVISNDPDPFICWQAYERSEDPIYVLENNIPIDPQY 115
Query: 873 YLENQISK---------------------------PLLRIFEPILKNASKELLSGDHTRS 905
YLENQISK P+LRIFEPILKNASKELL G HTRS
Sbjct: 116 YLENQISKVGFMNASNFFNDFSNVCCSLVGSFMLQPILRIFEPILKNASKELLHGSHTRS 175
Query: 906 ISISTPSNSGIMKFAKRQLSCIGCKALISNG--TLCSHCKGREAELYCKTVSQVQELEVL 963
ISISTPSNSGIMKFAK+Q +CIGCKAL+S G TLC HCKGREAELYCKTV+QV +LEVL
Sbjct: 176 ISISTPSNSGIMKFAKKQYTCIGCKALLSTGISTLCIHCKGREAELYCKTVAQVSDLEVL 235
Query: 964 FGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRW 1012
FGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA+LQLDRW
Sbjct: 236 FGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEARLQLDRW 284
>gi|313208729|emb|CBH41140.1| DNA polymerase delta [Taenia ovis]
Length = 278
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 165/280 (58%), Positives = 216/280 (77%), Gaps = 12/280 (4%)
Query: 470 VLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMM 529
V+SQLLRKA++ L++P + ++ Y G TV+E + GFY +PIATLDF+SLYPSIM+
Sbjct: 1 VVSQLLRKAREHGLLLPTQRPGQGDE--YVGGTVIEPQRGFYNEPIATLDFSSLYPSIMV 58
Query: 530 AYNLCYSTLVTPEDAR----------KLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
A+NLCY+TL+ PED NL P+ +TP+G FVK +++KG+LP +LE+
Sbjct: 59 AHNLCYTTLLKPEDISASGGISGLLANYNLGPDDYIRTPTGAYFVKKHIRKGLLPCVLEQ 118
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL AR +AK ++ D + VLDGRQLALK+SANSVYGFTGA VG+LPC+EISSS++
Sbjct: 119 LLEARTKAKREMVAETDHFRRRVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISSSISG 178
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK+L+E +FT GY+ +A+VIYGDTDSVM +FGV TVE AM+LGRE A+YI
Sbjct: 179 FGREMIEETKRLLEGRFTIGNGYKGDAKVIYGDTDSVMCKFGVSTVEEAMQLGREGAEYI 238
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
SG F+ PIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+DK
Sbjct: 239 SGKFMNPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDK 278
>gi|293323353|emb|CBJ17986.1| DNA polymerase delta [Taenia ovis]
Length = 286
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/280 (58%), Positives = 216/280 (77%), Gaps = 12/280 (4%)
Query: 470 VLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMM 529
V+SQLLRKA++ L++P + ++ Y G TV+E + GF+ +PIATLDF+SLYPSIM+
Sbjct: 9 VVSQLLRKAREHGLLLPTQRPGQGDE--YVGGTVIEPQRGFHNEPIATLDFSSLYPSIMV 66
Query: 530 AYNLCYSTLVTPEDAR----------KLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
A+NLCY+TL+ PED NL P+ +TP+G FVK +++KG+LP +LE+
Sbjct: 67 AHNLCYTTLLKPEDISASGGISGLLANYNLGPDDYIRTPTGAYFVKKHIRKGLLPCVLEQ 126
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL AR +AK ++ D + VLDGRQLALK+SANSVYGFTGA VG+LPC+EISSS++
Sbjct: 127 LLEARTKAKREMVAETDHFRRRVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISSSISG 186
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
+GR+MIE TK+L+E +FT GY+ +A+VIYGDTDSVM +FGV TVE AM+LGRE A+YI
Sbjct: 187 FGREMIEETKRLLEGRFTIGNGYKGDAKVIYGDTDSVMCKFGVSTVEEAMQLGREGAEYI 246
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
SG F+ PIKLEFEKVY+PYLLI+KKRYAGLY+T P+K+D+
Sbjct: 247 SGKFMNPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDE 286
>gi|313768423|ref|YP_004062103.1| hypothetical protein MpV1_220 [Micromonas sp. RCC1109 virus MpV1]
gi|312599119|gb|ADQ91143.1| hypothetical protein MpV1_220 [Micromonas sp. RCC1109 virus MpV1]
Length = 940
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 215/519 (41%), Positives = 295/519 (56%), Gaps = 39/519 (7%)
Query: 408 IISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQS 467
+ + + G+++ +A YC+KD LP +LL KL + N +EMA+ T VP+ FL+ RGQ
Sbjct: 365 MFARYKEGDSKKLGEVAEYCIKDTLLPHKLLKKLCTLLNLLEMAKATWVPLCFLVERGQQ 424
Query: 468 IKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSI 527
IKV SQL +KA++ ++P +K + YEGATVLEA G Y PI LDF +LYPSI
Sbjct: 425 IKVFSQLTKKARELGYMVPTIKYGSLPEEPYEGATVLEAHKGAYYTPITALDFEALYPSI 484
Query: 528 MMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVK-SNLQKGILPEILEELLAARKR 586
MMA+NLCYSTLV E R N+P G+ K + +LP IL EL RK+
Sbjct: 485 MMAHNLCYSTLVMDE-YRYGNVPGITYESFKIGDKIYKFAQGVPSLLPAILLELKQFRKK 543
Query: 587 AKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIE 646
AK D+ A + K V +G+QLA K+S NSVYGFTGA G LPC+ I+S+ T GR MIE
Sbjct: 544 AKKDMAAATGSM-KEVYNGKQLAYKVSMNSVYGFTGAGKGILPCVPIASTTTCRGRGMIE 602
Query: 647 HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQF------GVPTVEAAMKLGREAADYIS 700
TK VE F A+V YGDTDSVMV+F G V+ + ++G AA+ S
Sbjct: 603 ETKNYVEANFP-------GAKVRYGDTDSVMVEFDVGERTGEEAVKYSWEVGERAAEECS 655
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPE----KFDKMDTKGIETVRRDNCLLV 756
F KP LE EKVY+PY L SKKRYA WT + D +D KG++ VRRDN V
Sbjct: 656 ALFKKPNNLELEKVYWPYFLYSKKRYAAKLWTKGKDDQMHMDYIDIKGLQVVRRDNTPHV 715
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA-- 814
+ + E L +L D + K +LL + L++++ L+ D Y++K
Sbjct: 716 REVCKELLDVVLDAPDTGPPKELAKERAIELLSGDVPNEKLILSQSLS---DTYKIKGEP 772
Query: 815 -------------AHVELAERMRKRDAATAPNVGDRVPYVIIKAAK-GAKAYERSEDPIY 860
+HV++ +MR+R + P GDRVPY++ K AKA+E+SEDP +
Sbjct: 773 VSITSPESVNINQSHVQVVVKMRERKPGSEPQSGDRVPYLLTKTDDPKAKAFEKSEDPKF 832
Query: 861 VLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
V ENNIP+D YY EN+ P+ + EP+ +N +E+
Sbjct: 833 VEENNIPVDYLYYFENKFLNPVCDLLEPLFENPKQEIFG 871
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 40/292 (13%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+I I G T +G SVC FEPYF++ P+G D+ R+ + N P
Sbjct: 19 LISILGKTEDGKSVCVTTV-FEPYFFVKLPRGTTDQDV---------RILYNDLNKLRPD 68
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDR-------GIQLDGLGM 231
V + +K+ + +Q + F+++ + + + DR G D
Sbjct: 69 HVTSYSITRKKDVWGFQNNEMFAFMRL---------NFKNLADRRKVNSIFGYNRD---F 116
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRH 291
+ + YE+N+ LR M I W++ R +++ D +D +
Sbjct: 117 QKYHVYEANLDPVLRLMHRTGIQSTGWLDTGSECVRS-----HLAKVDIDLWCNDWKTLK 171
Query: 292 PEGEFSKMAPFRILSFDIECAGRKGHFPEPT--HDPVIQVANLVTLQGEKQPFIRNVMTL 349
P +APF + S DIEC G FP+ D Q+A + G +P+ + +
Sbjct: 172 PVSR-DDIAPFVVASIDIECNSSTGKFPDADVPGDACFQIALSLCKFGNDEPYEKTCLCY 230
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
K G DV+SFETER++L A++ +I E D D++ G+NI FDL Y+ ++
Sbjct: 231 KKTD---GPDVVSFETEREMLEAFQKYIHEKDVDIITGWNIFGFDLEYIFKR 279
>gi|410054333|ref|XP_003316601.2| PREDICTED: DNA polymerase delta catalytic subunit, partial [Pan
troglodytes]
Length = 648
Score = 326 bits (836), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 162/246 (65%), Positives = 202/246 (82%), Gaps = 3/246 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 398 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 457
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A + L++P VK G E Y GATV+E G+Y+ PIATLD
Sbjct: 458 YLLSRGQQVKVVSQLLRQAMHEGLLMPVVKSEGGED--YTGATVIEPLKGYYDVPIATLD 515
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + +TP+G+ FVK++++KG+LP+ILE
Sbjct: 516 FSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILEN 575
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS-SVT 638
LL+ARKRAKA+L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS S
Sbjct: 576 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQVSTR 635
Query: 639 SYGRQM 644
+ GRQM
Sbjct: 636 APGRQM 641
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/320 (48%), Positives = 207/320 (64%), Gaps = 5/320 (1%)
Query: 87 QCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFY 144
Q + ++FQQL+ID+ +G + P S GS ++R FGVT EG SVCC +HGF PYFY
Sbjct: 3 QTEPLIFQQLEIDHYVGPAQPVPGGPPPSRGSVPVLRAFGVTDEGFSVCCHIHGFAPYFY 62
Query: 145 ISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPF 202
P G GP+ + + L + NR K V +E+ + S+ Y PF
Sbjct: 63 TPAPPGFGPEHMGDLQRELNLAISRDNRGGKELTGPAVLAMELCSRESMFGYHGHGPSPF 122
Query: 203 LKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP 262
L+I VALP +VA R +L++GI++ GLG SF YE+NV F +RFM+D +IVG NW+E+P
Sbjct: 123 LRITVALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVDTDIVGCNWLELP 182
Query: 263 VGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEP 321
GKY + + + CQLE D L+SD++S PEG + ++AP R+LSFDIECAG KG FPEP
Sbjct: 183 AGKYTLRLKEKATQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFDIECAGHKGIFPEP 242
Query: 322 THDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVD 381
DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D+L AW FIR +D
Sbjct: 243 ERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEKEEDLLQAWSTFIRIMD 302
Query: 382 PDVMIGYNICKFDLPYLIEK 401
PDV+ GYNI FDLPYLI +
Sbjct: 303 PDVITGYNIQNFDLPYLISR 322
>gi|440493562|gb|ELQ76017.1| DNA polymerase delta, catalytic subunit [Trachipleistophora
hominis]
Length = 1386
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 168/337 (49%), Positives = 235/337 (69%), Gaps = 9/337 (2%)
Query: 399 IEKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPI 458
++KED+ + +I L NG+ +TRRR+AVYCLKD LP + +KL+ VEM RV GVPI
Sbjct: 630 MQKEDLPYYLIRGLFNGDDKTRRRIAVYCLKDTLLPLLIYEKLLIFITGVEMVRVLGVPI 689
Query: 459 SFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATL 518
++ +RG S+K+ +LR+A++ N V+P+V A ++G Y GA V+E G+Y++PIA L
Sbjct: 690 NWHFNRGISVKIFGLILREARKNNYVVPSV--AVKDEG-YMGAFVIEPERGYYDEPIAVL 746
Query: 519 DFASLYPSIMMAYNLCYST-LVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
DFASLYPSI++A+NLCYST L+ N E ++P+G FVK +++ GILP IL
Sbjct: 747 DFASLYPSIIIAHNLCYSTMLLGTRHGIDKNKDAE---RSPTGSYFVKRDVRVGILPVIL 803
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
E++L RK K +K K+P K +L+ RQ A K+SANSVYGFTG+ +G+LPCI+IS SV
Sbjct: 804 EKMLKKRKEVKEKMKNEKNPFMKTLLNARQNAFKVSANSVYGFTGSAIGRLPCIDISQSV 863
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVP--TVEAAMKLGREA 695
T YGR+MI TK +VE F GY+ ++ VIYGDTDSVMV+ V+ ++ +E
Sbjct: 864 TGYGREMIIKTKNVVESVFCRSNGYDFDSHVIYGDTDSVMVRIKKDDLNVDFVFEVAKEM 923
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWT 732
A+ +S F+KP+KLEFEKVY+PYLL++KKRYAG+ T
Sbjct: 924 ANKVSECFVKPVKLEFEKVYFPYLLMNKKRYAGVIET 960
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/275 (45%), Positives = 182/275 (66%), Gaps = 7/275 (2%)
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLV 798
+MDTKGIETVRRDNC LVK+L+ ECL +L+ RD A +VK+ + DL ++R+DLSLLV
Sbjct: 1115 RMDTKGIETVRRDNCKLVKSLIEECLDLLLMKRDPERAKSFVKAVVRDLYLDRIDLSLLV 1174
Query: 799 ITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDP 858
I+K L+KT +Y K AHVELAERM+KRD A A ++GDR+ YVI+ AYE+SEDP
Sbjct: 1175 ISKTLSKT--NYAAKQAHVELAERMKKRDNA-AVSIGDRIAYVIVDKGPNVIAYEKSEDP 1231
Query: 859 IYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMK 918
+YVLE N+P+D +YY+E QI KP+ R+F+P++ N + EL G+HT + T S + +
Sbjct: 1232 LYVLEKNLPVDVNYYIEQQIMKPVHRLFDPLMDNVN-ELFVGEHTATRKKGTLSGP-MAQ 1289
Query: 919 FAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSL 978
F ++ ++C+ CK LC C +Y V +++E E ++ + W +CQ C S+
Sbjct: 1290 FVRKGVTCLLCKE--RGSVLCKRCLPNYFSVYVGKVQEMKEKEDVYNKCWRECQRCIRSV 1347
Query: 979 HQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWN 1013
+VLC ++DCPIF+ R K +++ E Q+ + N
Sbjct: 1348 CTEVLCANKDCPIFFMRSKVIREIGEIDSQIKQLN 1382
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 138/309 (44%), Gaps = 83/309 (26%)
Query: 136 VHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQ 195
V F PYFY+ +DI +F A RN V + H ++ K++I Y
Sbjct: 38 VSDFFPYFYVKIK--TDKNDILNFF---------ATRNIVV---LSH-KLSTKKNIYGYT 82
Query: 196 QQKSQPFLKI----VVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
++ FLK+ VV +C + + ++SN+ F L+FM+D
Sbjct: 83 MD-NESFLKVFFWNVVVESAARRACENV--------------YEVFDSNIPFNLQFMVDM 127
Query: 252 NIVGGNWIEVPV---------------------------GKYRKTAKTLSYCQLEFDCLY 284
IVG +++++ + G++ K ++ + E D Y
Sbjct: 128 GIVGMSYLKIDMENGQEVRMEDAGGVNGVFSTSLDVHGDGQHSKRHRS----EEEADTKY 183
Query: 285 SDII-SRHPEGEFSKMA-------------PFRILSFDIECAGRKGHFPEPTHDPVIQVA 330
D + S H G+ ++ PF++LSFD+E R FPE + D +IQ+
Sbjct: 184 VDAVCSAHRIGKVYHISHKAIKPVDRDDIPPFKVLSFDLEVNNRDNRFPESSIDEIIQIG 243
Query: 331 NLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNI 390
N V + KQ + +S A I GVDV S+++ER++L W F+ DPDV++GYNI
Sbjct: 244 NTVKTEEYKQ----TIFCQRSTASIAGVDVRSYDSEREMLEEWIRFVYYEDPDVLLGYNI 299
Query: 391 CKFDLPYLI 399
FDL Y++
Sbjct: 300 SGFDLDYVV 308
>gi|395751602|ref|XP_002829654.2| PREDICTED: DNA polymerase delta catalytic subunit [Pongo abelii]
Length = 445
Score = 325 bits (832), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/333 (47%), Positives = 212/333 (63%), Gaps = 6/333 (1%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGHS 131
+W RP Q + ++FQQL+ID+ +G + P S GS ++R FGVT EG S
Sbjct: 78 RWLRP-TPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSHGSVPVLRAFGVTDEGFS 136
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKR 189
VCC +HGF PYFY P G GP+ + + L + NR K V +E+ +
Sbjct: 137 VCCHIHGFAPYFYTPAPPGFGPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRE 196
Query: 190 SIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
S+ Y PFL+I +ALP +VA R +L++GI++ GLG SF YE+NV F +RFM+
Sbjct: 197 SMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMV 256
Query: 250 DCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFD 308
D +IVG NW+E+P GKY + + + CQLE D L+SD++S PEG + ++AP R+LSFD
Sbjct: 257 DTDIVGCNWLELPAGKYALRLKEKATQCQLEVDVLWSDVVSHPPEGPWQRIAPLRVLSFD 316
Query: 309 IECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
IECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+E E D
Sbjct: 317 IECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPILGAKVQSYEKEED 376
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 377 LLQAWSTFIRIMDPDVITGYNIQNFDLPYLISR 409
>gi|444728683|gb|ELW69129.1| DNA polymerase delta catalytic subunit [Tupaia chinensis]
Length = 568
Score = 322 bits (825), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 157/334 (47%), Positives = 214/334 (64%), Gaps = 6/334 (1%)
Query: 73 AKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR--ELLPLSSGSAAIIRIFGVTREGH 130
++W RP S Q + ++FQQL+ID+ +G + P S S ++R FGVT EG
Sbjct: 77 SRWVRPTPPS-LDPQTEPLIFQQLEIDHYVGPAQALPGGPPPSRSSVPVLRAFGVTDEGV 135
Query: 131 SVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQK 188
SVCC +HGF PYFY P G GP +S + L + R K V +E+ +
Sbjct: 136 SVCCHIHGFAPYFYTPAPPGFGPQHLSDLQRELNVAISRDQRGGKELAGPAVLAVELCAR 195
Query: 189 RSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFM 248
S+ YQ PFL+I +ALP +VA R +L++GI++ GLG SF YE+NV F +RFM
Sbjct: 196 ESMFGYQGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFM 255
Query: 249 IDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSF 307
+D +IVG NW+E+P GKY +T + CQLE D L+SD++S PEG + ++AP R+LSF
Sbjct: 256 VDADIVGCNWLELPAGKYFLRTQGKATLCQLEADVLWSDVVSHPPEGSWQRIAPLRVLSF 315
Query: 308 DIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
DIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAPI+G V S+++E
Sbjct: 316 DIECAGRKGIFPEPERDPVIQICSLGLRWGETEPFLRLALTLRPCAPILGARVQSYDSEE 375
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++L AW FIR +DPDV+ GYNI FDLPYLI +
Sbjct: 376 ELLQAWSTFIRTMDPDVITGYNIQNFDLPYLISR 409
>gi|410670688|ref|YP_006923059.1| DNA polymerase Pol2 [Methanolobus psychrophilus R15]
gi|409169816|gb|AFV23691.1| DNA polymerase Pol2 [Methanolobus psychrophilus R15]
Length = 913
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 268/911 (29%), Positives = 419/911 (45%), Gaps = 173/911 (18%)
Query: 89 QSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYI--- 145
+++ FQ LD DYV D +IR+FG +G SVCC V GFEPYFY+
Sbjct: 8 ETMNFQILDADYVREDKE-----------PVIRLFGRGEDGRSVCCFVPGFEPYFYVNTK 56
Query: 146 SCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKI 205
S P+ G ++L+ R A ++ +E+V+K + YQ +P LK+
Sbjct: 57 SDPESAG--------ELLKERFSSA---------IKKVEVVRKFEPVGYQAA-PKPMLKV 98
Query: 206 VVALPTMVASCRGILDRGIQLDGL-GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVG 264
P V R ++ G+ +K YE+++LF RF+ID + G NW+ V +
Sbjct: 99 TTYDPGNVPEIRD------EIAGIPAVKEI--YETDILFRNRFLIDRELHGMNWVSVELS 150
Query: 265 KYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHD 324
+S C Y S E E +AP + L+FDIEC G P P
Sbjct: 151 SDNSPDPKIS-------CDYVITASSIKETEKLLIAPLKYLTFDIECLPIGGSMPTPETS 203
Query: 325 PVIQVA-------------------------NLVTLQGEKQPFIRNVMTLKSCAP--IVG 357
P+I ++ N+ T E R + P I G
Sbjct: 204 PIIMLSVSFSPAYEGHDAIVLVSKTVEGVSGNVETFSNEADMLNRFFEVFQQYDPDIIGG 263
Query: 358 VDVMSFE---------------------TERD-VLLAWRDF------------IREVDPD 383
+++ F+ T RD LL++R + + P
Sbjct: 264 YNILDFDIPYIVDRVSILNDPVSIVKPVTGRDGRLLSYRKIGTRTMVSMPGRVVVDALPL 323
Query: 384 VMIGYNICKFDLPYL------IEKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRL 437
V Y++ ++ L + +EK D+ S + D N + E R Y +D+ L L
Sbjct: 324 VRSQYSLKRYTLRNVAKELLEMEKLDIAPSEMEDHWNDSGEKILRFIDYAQRDSDLAMEL 383
Query: 438 LDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIP--------NVK 489
L KL + Y+ +A+V+G + ++ GQ+ V + LLR+ +++ VIP + +
Sbjct: 384 LMKLRLLDKYIAVAQVSGSLLQEVVDGGQTSMVDNLLLREYGKRDRVIPPKPSDDEVSFR 443
Query: 490 QAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNL 549
SE +G VLE + G E I +D+ SLYP+IMMA+NLCY+T+V + + +
Sbjct: 444 NLSSE--GLKGGEVLEPKKGLLEN-IIIMDYKSLYPTIMMAHNLCYTTVVEKDRPKGETI 500
Query: 550 PPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLA 609
P PSG FV + + KG++P ILE LL R K ++ A E VLD QLA
Sbjct: 501 KP------PSGGEFVPAEVFKGVMPAILENLLNRRIETKKRMRSAATEEEHRVLDATQLA 554
Query: 610 LKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTV---------- 659
LKI NS YG++G T +L + ++++VTS+GR+ I +T+ ++ V
Sbjct: 555 LKILLNSFYGYSGYTRARLYSLPLANAVTSFGRENILNTRSIINGTINKVILRDSKVLFT 614
Query: 660 --------GGYEHNAEVIYGDTDSVMVQFGVP---TVEAAMKLGREAADYISGTFIKPIK 708
G + V+YGDTDSV VQ +++ A +G A +S + P++
Sbjct: 615 EEVDTPKTGDRMISLSVVYGDTDSVFVQCTSKNDISLDDAGLVGNRIAGTVSASLPDPME 674
Query: 709 LEFEKVYYPYLLISKKRYA-------GLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVT 761
LEFE + LL++KKRYA G W D + KG+ETVRRD C L +
Sbjct: 675 LEFESIAKRGLLLAKKRYAIWVFERSGDGWK-----DSIKVKGMETVRRDWCELTSKTLN 729
Query: 762 ECLHKILVDRDIPGAVQYVKSTIS-----DLLMNRMDLSLLVITKGLTKTGDDYEVKAAH 816
L +L + + AV +V+ + D+ ++ + L +T+ +K Y+ K H
Sbjct: 730 RVLELVLKEGKVEAAVAHVREVVDRVRNIDVRKDKDIIDDLTMTRMFSKNASRYKNKQPH 789
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
+ + E++ +R + P VG+R+P+VII A R+EDP YV E+NIPID YY++
Sbjct: 790 ITVVEKIEER-TGSPPAVGERIPFVII--AGKDLFVNRAEDPEYVREHNIPIDVDYYIKK 846
Query: 877 QISKPLLRIFE 887
Q+ P+ RI +
Sbjct: 847 QVLPPVERILD 857
>gi|168023037|ref|XP_001764045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684784|gb|EDQ71184.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1227
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 215/659 (32%), Positives = 345/659 (52%), Gaps = 70/659 (10%)
Query: 384 VMIGYNICKFDLPYLIE------KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRL 437
V++ +N+ F L + KE + + +S+L G RRL +Y L +A + +L
Sbjct: 568 VLVSFNLSTFTLEECSQVFLGAPKEALSTAAVSELWQGKYGGLRRLLLYSLHEAEVVLKL 627
Query: 438 LDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT 497
+++L I VEMARVTG+ +S +L + Q +++ S LLR A+++ ++ G
Sbjct: 628 MERLQTIPETVEMARVTGLTLSDVLYKAQMVRIQSLLLRSARKEGWLLGGTTLNGQ---L 684
Query: 498 YEGATVLEAR----AGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC 553
E +L + A FY+ P+A LDFASLYPS+ MAYNLCY+TLV PEDA+ ++P
Sbjct: 685 SESPFLLHPKDNHTAAFYQDPVAILDFASLYPSLFMAYNLCYTTLVHPEDAK--SIPSHQ 742
Query: 554 VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADL-KEAKDPLEKAVLDGRQLALKI 612
+ + +G FV S++++G+LP I L+ ARK+A+ + +E E AVLDGRQ ALK+
Sbjct: 743 LITSLTGAQFVVSSVRRGVLPRICGALITARKQARDRMTQEHISSEEYAVLDGRQKALKL 802
Query: 613 SANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGD 672
+N++YGFTGA+ + ++ + S G + +LV F V EVIY
Sbjct: 803 CSNALYGFTGASASPQQAVPLADTCLSMGAASCKQAVQLVGSIFEKV-------EVIYAQ 855
Query: 673 TDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWT 732
TDSV F ++E A+KLG +AA+ +S F PI L+FE+V RYAG +T
Sbjct: 856 TDSVFAHFKDVSIEEAIKLGTQAAEIVSQAFPSPIVLKFERV---------NRYAGRQYT 906
Query: 733 NPEKFDKMDT---KGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLM 789
+ + T KGIE+ RRD V+ + + L +LV+ D+P A K++I ++
Sbjct: 907 CSQGNEGQGTLFVKGIESERRDVPRFVRKICKQALIDVLVENDVPLAYVNCKNSIRRMVA 966
Query: 790 NRMDLSLLVITKGLTKTGDDYEV----------------------KAAHVELAERMRKRD 827
+ L ++T GL + DD+++ + HV L+ R+++++
Sbjct: 967 GKSSLYDFIMTGGLWRV-DDHDITKLVEKTKSSHKHVGASTAEEGRGPHVALSVRLKRKN 1025
Query: 828 AATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
++G+R+PYV++ + + + +EDPI L ++TH YLEN++ KPL I E
Sbjct: 1026 PDRQFHIGERIPYVLMANSSKLQD-DMAEDPIEALIGGSLVNTHVYLENKLRKPLESILE 1084
Query: 888 PILKNAS-KELLSGDHT---RSISISTPSNSG--IMKFAKRQLSCIGCKALI--SNGTLC 939
++ +A+ +EL +G HT S S P+ + + F + + C+ C+ + + G LC
Sbjct: 1085 FVVDSAALRELFTGSHTVPPPSASAGAPNRTQGLVSSFYRPKSPCVICRKPLETAQGALC 1144
Query: 940 SHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLH-QDVLCTSRDCPIFYRR 995
C G + E EV +C C H Q VLCT+ DCP+FY R
Sbjct: 1145 KECTLAGYAQNATTAIFLETAEQEVKVNGAHVECMRCHSGGHFQSVLCTNSDCPVFYMR 1203
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 27/187 (14%)
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI------------SHFHQ 161
S + + ++G++ G S+ +V+ F PYF+ P G I + ++
Sbjct: 38 SATPPSVLLYGLSSGGESIAVQVNDFMPYFWFPAPVGNIDGKIVPLKEGCLETVKEYLNR 97
Query: 162 ILE-GRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPT---MVASCR 217
L+ R + A+ N QFV IEM + +MYY++ FLK+ V +VA
Sbjct: 98 KLQTSRKKSADSND---QFVAAIEMEHRTPLMYYRRGGPFSFLKVQVWRDKEIGLVAKEL 154
Query: 218 GILDRGIQLDGLGM--KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSY 275
L G ++ G G+ K ++E + +RF D I GG+W+E+ K A T+ +
Sbjct: 155 TALAEGNEMRGEGLVWKDHTSHEEKIKLGMRFFCDTGIAGGSWVEI------KQAVTIPH 208
Query: 276 CQLEFDC 282
Q + C
Sbjct: 209 DQYKTRC 215
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 321 PTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP----IVGVDVMSFETERDVLLAWRDF 376
P+ DPV+ +++++ QG Q + V+ S P + GV++ F++E +L AW +
Sbjct: 422 PSRDPVLVISHILHFQGH-QDGTKQVVFTHSKGPQEGALPGVELRMFDSEIVMLRAWHKY 480
Query: 377 -IREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLA 424
EVDPD++ Y + K L YL E+ V L+ G + RR+
Sbjct: 481 WYLEVDPDIVCVYQMKK-SLRYLAERFKV-------LKLGTFDLGRRMG 521
>gi|340025735|ref|NP_048532.2| hypothetical protein [Paramecium bursaria Chlorella virus 1]
gi|338221966|gb|AAC96553.2| hypothetical protein [Paramecium bursaria Chlorella virus 1]
Length = 913
Score = 319 bits (818), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 196/517 (37%), Positives = 296/517 (57%), Gaps = 30/517 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K D+ I + GNAE R +A Y KD LP +LL K+ + + EMA VP+
Sbjct: 367 QKNDLPAMQIFEKFEGNAEDRAIIAAYAAKDTDLPLKLLKKMAILEDLTEMANAVKVPVD 426
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ I+ S L+ KA+Q N IP+ K A + +G YEGATVL+A+ G Y PIA LD
Sbjct: 427 YINFRGQQIRAFSCLVGKARQMNYAIPDDK-AWATEGKYEGATVLDAKKGAYFTPIAALD 485
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-------PECVNKTPSGETFVKSNLQKGI 572
FASLYPSI+ A+N+ TLV + R N+P + K + ++ +G+
Sbjct: 486 FASLYPSIIRAHNMSPETLVM--EKRFENVPGVEYYEIETGLGKFKYAQKNDETGEGQGV 543
Query: 573 LPEILEELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
+P +L++L RK AK + EAK D ++A+ D +Q + K+ NSVYGF GA+ G +P
Sbjct: 544 VPALLDDLAKFRKLAKKHMAEAKRNGDDFKEALYDAQQRSFKVVMNSVYGFLGASKGFIP 603
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPT----- 684
C+ I++SVT+ GR+MIEHT K + +EVIYGDTDSVMV+ +P
Sbjct: 604 CVPIAASVTATGRKMIEHTAKRAVELLP-------GSEVIYGDTDSVMVKMKLPDDKVHD 656
Query: 685 VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKG 744
++ K+ + A I+ F P LEFEK+YYPY+L SKKRYA + + P++ K+D KG
Sbjct: 657 MDEQFKMAKWLAGEITKDFRAPNDLEFEKIYYPYILYSKKRYAAVKFEEPDEKGKVDVKG 716
Query: 745 IETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT 804
+ VRRD + ++++ E L IL +D P AV I +L N + +++K L
Sbjct: 717 LALVRRDFSPITRDILKESLDTILYKKDTPTAVSETLERIRKVLDNEYPMEKFMMSKTL- 775
Query: 805 KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGA--KAYERSEDPIYVL 862
KTG E + H+ +A ++ +R P+ G RVP+V I+ K K ++EDP +
Sbjct: 776 KTGYKNECQ-PHLHVANKIYERTGFPVPS-GARVPFVYIEDKKNPDIKQSFKAEDPTFAQ 833
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+N + +D +Y+E+Q+ KP+ +FEP+L + KE+
Sbjct: 834 DNGLIVDRLFYIEHQLLKPICSLFEPLLDDPEKEIFG 870
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 126/294 (42%), Gaps = 30/294 (10%)
Query: 108 ELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRM 167
+++P S I IFG T EG +VC + F PYF + P+ P + F I E M
Sbjct: 15 DVVPDKGESFFRINIFGKTAEGKTVCVQTK-FTPYFLLEVPESWSPARTNLF--ITETAM 71
Query: 168 REANRNSKVPQFVRHIEMVQKRSIMY-YQQQKSQPFLKIVVALPTMVASCRGILDRGIQL 226
+ VR + + KR M+ + K + ++ V + + L Q+
Sbjct: 72 KY--------DAVRPMCLSTKRKNMWGFDGGKMRNMVQFVFKTQAQLRKAKYRLKDQYQI 123
Query: 227 DGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSD 286
YES+V +R NI +WI V K +S +E + +
Sbjct: 124 ----------YESSVDPIIRVFHLRNINPADWIRV--SKAYPAQTRISNSDIEVETSFQH 171
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIR 344
+ E + P I S+DIE + FP E D IQ+A GE +P+ R
Sbjct: 172 L----GPVEDKTVPPLVIASWDIETYSKDRKFPLAENPTDYCIQIATTFQKYGEPEPYRR 227
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
V+ K AP+ GV+++S E DV+ W +++ DV IGYN ++DL Y+
Sbjct: 228 VVVCYKQTAPVEGVEIISCLEESDVMNTWMKILQDEKTDVSIGYNTWQYDLRYV 281
>gi|3915670|sp|P30321.2|DPOL_PBCV1 RecName: Full=DNA polymerase
gi|2702251|gb|AAC00532.1| DNA polymerase [Paramecium bursaria Chlorella virus 1]
Length = 913
Score = 319 bits (817), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 196/517 (37%), Positives = 296/517 (57%), Gaps = 30/517 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K D+ I + GNAE R +A Y KD LP +LL K+ + + EMA VP+
Sbjct: 367 QKNDLPAMQIFEKFEGNAEDRAIIAAYAAKDTDLPLKLLKKMAILEDLTEMANAVKVPVD 426
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ I+ S L+ KA+Q N IP+ K A + +G YEGATVL+A+ G Y PIA LD
Sbjct: 427 YINFRGQQIRAFSCLVGKARQMNYAIPDDK-AWATEGKYEGATVLDAKKGAYFTPIAALD 485
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-------PECVNKTPSGETFVKSNLQKGI 572
FASLYPSI+ A+N+ TLV + R N+P + K + ++ +G+
Sbjct: 486 FASLYPSIIRAHNMSPETLVM--EKRFENVPGVEYYEIETGLGKFKYAQKNDETGEGQGV 543
Query: 573 LPEILEELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
+P +L++L RK AK + EAK D ++A+ D +Q + K+ NSVYGF GA+ G +P
Sbjct: 544 VPALLDDLAKFRKLAKKHMAEAKRNGDDFKEALYDAQQRSFKVVMNSVYGFLGASKGFIP 603
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPT----- 684
C+ I++SVT+ GR+MIEHT K + +EVIYGDTDSVMV+ +P
Sbjct: 604 CVPIAASVTATGRKMIEHTAKRAVELLP-------GSEVIYGDTDSVMVKMKLPDDKVHD 656
Query: 685 VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKG 744
++ K+ + A I+ F P LEFEK+YYPY+L SKKRYA + + P++ K+D KG
Sbjct: 657 MDEQFKMAKWLAGEITKDFRAPNDLEFEKIYYPYILYSKKRYAAVKFEEPDEKGKVDVKG 716
Query: 745 IETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT 804
+ VRRD + ++++ E L IL +D P AV I +L N + +++K L
Sbjct: 717 LALVRRDFSPITRDILKESLDTILYKKDTPTAVSETLERIRKVLDNEYPMEKFMMSK-LL 775
Query: 805 KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGA--KAYERSEDPIYVL 862
KTG E + H+ +A ++ +R P+ G RVP+V I+ K K ++EDP +
Sbjct: 776 KTGYKNECQ-PHLHVANKIYERTGFPVPS-GARVPFVYIEDKKNPDIKQSFKAEDPTFAQ 833
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+N + +D +Y+E+Q+ KP+ +FEP+L + KE+
Sbjct: 834 DNGLIVDRLFYIEHQLLKPICSLFEPLLDDPEKEIFG 870
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 126/294 (42%), Gaps = 30/294 (10%)
Query: 108 ELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRM 167
+++P S I IFG T EG +VC + F PYF + P+ P + F I E M
Sbjct: 15 DVVPDKGESFFRINIFGKTAEGKTVCVQTK-FTPYFLLEVPESWSPARTNLF--ITETAM 71
Query: 168 REANRNSKVPQFVRHIEMVQKRSIMY-YQQQKSQPFLKIVVALPTMVASCRGILDRGIQL 226
+ VR + + KR M+ + K + ++ V + + L Q+
Sbjct: 72 KY--------DAVRPMCLSTKRKNMWGFDGGKMRNMVQFVFKTQAQLRKAKYRLKDQYQI 123
Query: 227 DGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSD 286
YES+V +R NI +WI V K +S +E + +
Sbjct: 124 ----------YESSVDPIIRVFHLRNINPADWIRV--SKAYPAQTRISNSDIEVETSFQH 171
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIR 344
+ E + P I S+DIE + FP E D IQ+A GE +P+ R
Sbjct: 172 L----GPVEDKTVPPLVIASWDIETYSKDRKFPLAENPTDYCIQIATTFQKYGEPEPYRR 227
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
V+ K AP+ GV+++S E DV+ W +++ DV IGYN ++DL Y+
Sbjct: 228 VVVCYKQTAPVEGVEIISCLEESDVMNTWMKILQDEKTDVSIGYNTWQYDLRYV 281
>gi|157953421|ref|YP_001498312.1| hypothetical protein AR158_C230-34R [Paramecium bursaria Chlorella
virus AR158]
gi|156068069|gb|ABU43776.1| hypothetical protein AR158_C230-34R [Paramecium bursaria Chlorella
virus AR158]
Length = 913
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 195/516 (37%), Positives = 293/516 (56%), Gaps = 30/516 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K D+ I + G A+ R +A Y KD LP +LL K+ + + EMA VP+
Sbjct: 367 QKNDLPAMQIFEKFEGGADDRAIIAAYAAKDTDLPLKLLKKMAILEDITEMANAVKVPVD 426
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L+ KA+Q N IP+ K + G YEGATVL+A+ G Y PIA LD
Sbjct: 427 YINFRGQQVRAFSCLVGKARQMNYAIPDDKM-WTVDGKYEGATVLDAKKGAYFTPIAALD 485
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVK-------SNLQKGI 572
FASLYPSI+ A+N+ TLV D R NLP + +G K + +G+
Sbjct: 486 FASLYPSIIRAHNMSPETLVM--DKRFENLPGIEYYEIETGLGTFKYAQKNDETGEGQGV 543
Query: 573 LPEILEELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
+P +L++L RK+AK + EAK D +A+ D +Q + K+ NSVYGF GA+ G +P
Sbjct: 544 VPALLDDLAKFRKQAKKHMAEAKKNDDEFREALYDAQQRSFKVVMNSVYGFLGASRGFIP 603
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPT----- 684
C+ I++SVT+ GR+MIEHT K V + +EVIYGDTDSVM++ +P
Sbjct: 604 CVPIAASVTATGRKMIEHTAKRVTELLP-------GSEVIYGDTDSVMIRMKLPDDKIHD 656
Query: 685 VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKG 744
++ K+ + A I+ F P LEFEK+YYPY+L SKKRYA + + +P++ K+D KG
Sbjct: 657 MDEQFKMAKWLAGEITKDFKAPNDLEFEKIYYPYILYSKKRYAAIKFEDPDEKGKVDVKG 716
Query: 745 IETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT 804
+ VRRD + + ++ E L IL +D P AV I +L N + ++K L
Sbjct: 717 LALVRRDFSPITREILKESLDTILFKKDTPTAVTETVECIRKVLDNEYPMEKFTMSKTL- 775
Query: 805 KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKG--AKAYERSEDPIYVL 862
KTG E + H+ ++ ++ +R P+ G RVP+V I+ K K R+EDP +
Sbjct: 776 KTGYKNECQ-PHLHVSNKIFERTGFPVPS-GARVPFVYIEDKKNLDTKQSFRAEDPTFAQ 833
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPILKNASKELL 898
EN++ +D +Y+E+Q+ KP+ +FEP+L + E+
Sbjct: 834 ENDLIVDRLFYIEHQLMKPICSLFEPLLDDPETEIF 869
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 127/282 (45%), Gaps = 30/282 (10%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I IFG T +G ++C + F P+F + P+ + F I E M+ +A R S +P
Sbjct: 27 INIFGKTMDGKTICVRAK-FTPFFLLETPESWSAARTNLF--ITETAMKYDAIRPSCLP- 82
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
+++++ Y K +P ++ V + + + L Q+ YE
Sbjct: 83 -------TKRKNMWGYDGGKMRPMVQFVFKTLSQMRKAKYRLKNEYQI----------YE 125
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
S+V +R NI +W+ V K +S +E + + + + +
Sbjct: 126 SSVDPIIRIFHLRNINPADWVHV--SKAFPVETRISNSDIEVETSFQHL----GPSDVKE 179
Query: 299 MAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
+ P I S+DIE + FP E + D IQ+A GE +P+ R V+ K AP+
Sbjct: 180 VPPLIIASWDIETYSKDRKFPLAENSTDYCIQIATTFQKYGEPEPYRRVVVCYKQTAPVE 239
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
GV+++S E DV+ W +++ D+ IGYN ++DL Y+
Sbjct: 240 GVEIISCAEEADVMNTWMKILQDEKTDISIGYNTWQYDLRYI 281
>gi|4038646|dbj|BAA35142.1| DNA polymerase [Paramecium bursaria Chlorella virus CVK2]
Length = 913
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 195/523 (37%), Positives = 298/523 (56%), Gaps = 30/523 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K D+ I + G++E R +A Y KD LP +LL K+ + + EMA VP+
Sbjct: 367 QKNDLPAMQIFEKFEGDSEDRAVIAAYAAKDTDLPLKLLKKMAILEDLTEMANAVKVPVD 426
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ I+ S L+ KA+Q N IP+ K A + +G YEGATVL+A+ G Y PIA LD
Sbjct: 427 YINFRGQQIRAFSCLVGKARQMNYAIPDDK-AWATEGKYEGATVLDAKKGAYFTPIAALD 485
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLP-------PECVNKTPSGETFVKSNLQKGI 572
FASLYPSI+ A+N+ TLV + R N+P + K + ++ +G+
Sbjct: 486 FASLYPSIIRAHNMSPETLVM--EKRFENVPGVEYYEIETGLGKFKYAQKNDETGEGQGV 543
Query: 573 LPEILEELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
+P +L++L RK AK + EAK D ++A+ D +Q + K+ NSVYGF GA+ G +P
Sbjct: 544 VPALLDDLAKFRKLAKKHMAEAKRNGDDFKEALYDAQQRSFKVVMNSVYGFLGASKGFIP 603
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPT----- 684
C+ I++SVT+ GR+MIEHT K + +EVIYGDTDSVMV+ +P
Sbjct: 604 CVPIAASVTATGRKMIEHTAKRAVELLP-------GSEVIYGDTDSVMVKMKLPDDKVHD 656
Query: 685 VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKG 744
++ K+ + A I+ F P LEFEK+YYPY+L SKKRYA + + P++ K+D KG
Sbjct: 657 MDEQFKMAKWLAGEITKDFRAPNDLEFEKIYYPYILYSKKRYAAVKFEEPDETGKVDVKG 716
Query: 745 IETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT 804
+ VRRD + + ++ E L IL +D P AV I +L N + +++K L
Sbjct: 717 LALVRRDFSPITREILKESLDTILYKKDTPTAVSETLERIRKVLDNEYPMEKFMMSKTL- 775
Query: 805 KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGA--KAYERSEDPIYVL 862
KTG E + H+ +A ++ +R P+ G RVP+V I+ K K ++EDP +
Sbjct: 776 KTGYKNECQ-PHLTVANKIYERTGFPVPS-GARVPFVYIEDKKNPDIKQSFKAEDPTFAR 833
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRS 905
+N++ +D +Y+E+Q+ KP+ +FEP+L + KE+ +S
Sbjct: 834 DNDLVVDRLFYIEHQLRKPICSLFEPLLDDPDKEIFEHPSLKS 876
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 127/294 (43%), Gaps = 30/294 (10%)
Query: 108 ELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRM 167
+++P S I IFG T EG +VC + F PYF + P+ P + F I E M
Sbjct: 15 DVIPDKGESFFRINIFGKTAEGKTVCVQTK-FTPYFLLEVPESWSPARTNLF--ITETAM 71
Query: 168 REANRNSKVPQFVRHIEMVQKRSIMY-YQQQKSQPFLKIVVALPTMVASCRGILDRGIQL 226
+ +R + + KR M+ + K + ++ V + + L Q+
Sbjct: 72 KY--------DAIRPMCLSTKRKNMWGFDGGKMRNMVQFVFKTQAQLRKAKYRLKDQYQI 123
Query: 227 DGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSD 286
YES+V +R NI +WI V K +S +E + +
Sbjct: 124 ----------YESSVDPIIRVFHLRNINPADWIR--VSKAYPAQTRISNSDIEVETSFQH 171
Query: 287 IISRHPEGEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIR 344
+ P + + P I S+DIE + FP E D IQ+A GE +P+ R
Sbjct: 172 L---GPVDD-KTVPPLVIASWDIETYSKDRKFPLAENPTDYCIQIATTFQKYGEPEPYRR 227
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
V+ K AP+ GV+++S E DV+ W +++ DV IGYN ++DL Y+
Sbjct: 228 VVVCYKQTAPVEGVEIISCLEESDVMNTWMKILQDEKTDVSIGYNTWQYDLRYV 281
>gi|448934734|gb|AGE58286.1| DNA polymerase [Paramecium bursaria Chlorella virus NY-2B]
Length = 913
Score = 316 bits (809), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 194/516 (37%), Positives = 293/516 (56%), Gaps = 30/516 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K D+ I + G A+ R +A Y KD LP +LL K+ + + EMA VP+
Sbjct: 367 QKNDLPAMQIFEKFEGGADDRAIIAAYAAKDTDLPLKLLKKMAILEDITEMANAVKVPVD 426
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L+ KA+Q N IP+ K + G YEGATVL+A+ G Y PIA LD
Sbjct: 427 YINFRGQQVRAFSCLVGKARQMNYAIPDDKM-WTVDGKYEGATVLDAKKGAYFTPIAALD 485
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVK-------SNLQKGI 572
FASLYPSI+ A+N+ TLV D R NLP + +G K + +G+
Sbjct: 486 FASLYPSIIRAHNMSPETLVM--DKRFENLPGIEYYEIETGLGTFKYAQKNDETGEGQGV 543
Query: 573 LPEILEELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
+P +L++L RK+AK + EAK D +A+ D +Q + K+ NSVYGF GA+ G +P
Sbjct: 544 VPALLDDLAKFRKQAKKHMAEAKKNDDEFREALYDAQQRSFKVVMNSVYGFLGASRGFIP 603
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPT----- 684
C+ I++SVT+ GR+MIEHT K V + +EVIYGDTDSVM++ +P
Sbjct: 604 CVPIAASVTATGRKMIEHTAKRVTELLP-------GSEVIYGDTDSVMIRMKLPDDKIHD 656
Query: 685 VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKG 744
++ K+ + A I+ F P LEFEK+YYPY+L SKKRYA + + +P + K+D KG
Sbjct: 657 MDEQFKMAKWLAGEITKDFRAPNDLEFEKIYYPYILYSKKRYAAVKFEDPNEKGKVDVKG 716
Query: 745 IETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT 804
+ VRRD + + ++ E L IL +D P AV I +L N + +++K L
Sbjct: 717 LALVRRDFSPITREILKESLDTILYKKDTPTAVTETVEQIRKVLDNEFPMEKFMMSKTL- 775
Query: 805 KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII--KAAKGAKAYERSEDPIYVL 862
KTG E + H+ ++ ++ +R P+ G RVP+V I ++ K ++EDP +
Sbjct: 776 KTGYKNECQ-PHLHVSNKIFERTGFPVPS-GARVPFVYIEDRSNPDIKQSFKAEDPTFAR 833
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPILKNASKELL 898
EN + +D +Y+E+Q+ KP+ +FEP+L N +E+
Sbjct: 834 ENGLIVDRLFYIEHQLLKPICSLFEPLLDNPEEEIF 869
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 30/282 (10%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I IFG T +G +VC + F P+F + P+ + F I E M+ +A R S +P
Sbjct: 27 INIFGKTMDGKTVCVRAK-FTPFFLLETPESWSAARTNLF--ITETAMKYDAIRPSCLP- 82
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
+++++ Y K +P ++ V + + + L Q+ YE
Sbjct: 83 -------TKRKNMWGYDGGKMRPMVQFVFKTLSQMRKAKYRLKNEYQI----------YE 125
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
S+V +R NI +W+ V K +S +E + + + + +
Sbjct: 126 SSVDPIIRIFHLRNINPADWMHV--SKAFPVETRISNSDIEVETSFQHL----GPSDVKE 179
Query: 299 MAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
+ P I S+DIE + FP E D IQ+A GE +P+ R V+ K A +
Sbjct: 180 VPPLIIASWDIETYSKDRKFPLAENPADYCIQIATTFQKYGEPEPYRRVVVCYKQTASVE 239
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
GV+++S E DV+ W +++ DV IGYN+ ++DL Y+
Sbjct: 240 GVEIISCAEEADVMNTWMTILQDEKTDVSIGYNLWQYDLRYI 281
>gi|384253110|gb|EIE26585.1| DNA/RNA polymerase [Coccomyxa subellipsoidea C-169]
Length = 1425
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 204/633 (32%), Positives = 322/633 (50%), Gaps = 57/633 (9%)
Query: 416 NAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLL 475
A R RLA Y + + LL +L + +E+ RVTG+ + +L Q I+ S LL
Sbjct: 778 QAADRARLASYAADRVGVVRALLQRLATLPEAIEIGRVTGLTLGQVLYNAQMIRTWSLLL 837
Query: 476 RKAKQKNLVIPNVKQAGS-EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLC 534
R A++ ++ + A + Y V G Y+ P+A LDFASLYPS+ AYNLC
Sbjct: 838 RNAQRSGYIVSGRQDALPLSESPYLMHPVETKNVGLYQSPVAILDFASLYPSLYRAYNLC 897
Query: 535 YSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEA 594
Y+TL+ P+D+ PE V TP+G+ +VK ++KGILP IL L+ AR +A LKEA
Sbjct: 898 YTTLLHPDDSNAFV--PEHVTVTPTGDVYVKPEIRKGILPSILAALINARAATRAALKEA 955
Query: 595 KDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVED 654
P + AVLD RQ ALK++AN++YGFTGA L C+ ++ S + G Q +L+ +
Sbjct: 956 TSPAQMAVLDSRQKALKLTANALYGFTGAQASPLQCVPLADSCLALGAQSCRRAIELLTE 1015
Query: 655 KFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKV 714
F +A+VIYG TDS+ + F T AM+LGR AA Y+S F + ++L+FEKV
Sbjct: 1016 AFQKGVFGSKDAKVIYGQTDSLFINFRSSTTAEAMQLGRAAAKYVSSNFPEHMELKFEKV 1075
Query: 715 YYPYLLISKKRYAGLYWTNPEKFDK----MDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
P++L+ RYAG + + ++ + + KG++++ R +V+N + L +I++
Sbjct: 1076 AQPFMLLHVNRYAGRAFESEDEVQEGKGVLMVKGLKSMWRQAPPIVRNTLQGVLARIILQ 1135
Query: 771 RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTK-TG--------------------DD 809
D+ GAV+Y + I LL +++L L +T GL + TG +
Sbjct: 1136 EDVRGAVEYAEGQIRRLLSGQVELWELPLTGGLWRVTGAQVAQAAAAEGAPGPAAAAVSE 1195
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPID 869
EV+ H LA R+++RD +G+R+ YV++ A+ + +EDP+ + D
Sbjct: 1196 EEVRGPHASLAVRLQQRDPGRTFVLGERLSYVLLPGARTQD--DAAEDPLTAAKAGCSAD 1253
Query: 870 THYYLENQISKPLLRIFEPILKNAS-KELLSGDHTR-------SISISTPSNS------- 914
Y +N++ KPL I L + +E+L+G HTR + +S P
Sbjct: 1254 YELYWQNKLRKPLAEILATCLSASQIQEVLNGPHTRVRVDTVAAAQVSPPGKKAKGGRQM 1313
Query: 915 GIMKFAKRQLSCIGCKALI-SNG-------TLCSHCK---GREAELYCKTVSQVQELEVL 963
G+ F + + C+ C+ + S G LC C G + + + + + LE
Sbjct: 1314 GLASFYRGTVKCLACRRPVHSTGGNSEDGPALCEDCAVEDGVREGVLLELLGEQRRLEQR 1373
Query: 964 FGRLWTQCQECQ-GSLHQDVLCTSRDCPIFYRR 995
+ C C G L VLC + +CP+ Y R
Sbjct: 1374 NCTANSLCMNCHSGGLTGKVLCENGECPVLYAR 1406
>gi|232016|sp|P30320.1|DPOL_PBCVN RecName: Full=DNA polymerase
gi|281076|pir||B42543 DNA-directed DNA polymerase (EC 2.7.7.7) - Chlorella virus CV-NY-2A
gi|323322|gb|AAA88827.1| DNA polymerase [Paramecium bursaria Chlorella virus NY2A]
Length = 913
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 195/516 (37%), Positives = 292/516 (56%), Gaps = 30/516 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K D+ I + G A+ R +A Y KD LP +LL K+ + + EMA VP+
Sbjct: 367 QKNDLPAMQIFEKFEGGADDRAIIAAYARKDTDLPLKLLKKMAILEDITEMANAVKVPVD 426
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L+ KA+Q N IP+ K + G YEGATVL+A+ G Y IA LD
Sbjct: 427 YINFRGQQVRAFSCLVGKARQMNYAIPDDKM-WTVDGKYEGATVLDAKKGAYFTSIAALD 485
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVK-------SNLQKGI 572
FASLYPSI+ A+N+ TLV D R NLP + +G K + +G+
Sbjct: 486 FASLYPSIIRAHNMSPETLVM--DKRFENLPGIEYYEIETGLGTFKYPQKNDETGEGQGV 543
Query: 573 LPEILEELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
+P +L++L RK+AK + EAK D +A+ D +Q + KI NSVYGF GA+ G +P
Sbjct: 544 VPALLDDLAKFRKQAKKHMAEAKKNDDEFREALYDAQQRSYKIVMNSVYGFLGASRGFIP 603
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPT----- 684
C+ I++SVT+ GR+MIEHT K V + +EVIYGDTDSVM++ +P
Sbjct: 604 CVPIAASVTATGRKMIEHTAKRVTELLP-------GSEVIYGDTDSVMIRMKLPDDKIHD 656
Query: 685 VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKG 744
++ K+ + A I+ F P LEFEK+YYPY+L SKKRYA + + +P++ K+D KG
Sbjct: 657 MDEQFKMAKWLAGEITKDFKAPNDLEFEKIYYPYILYSKKRYAAIKFEDPDEKGKVDVKG 716
Query: 745 IETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT 804
+ VRRD + + ++ E L IL +D P AV I +L N + ++K L
Sbjct: 717 LALVRRDFSPITREILKESLDTILFKKDTPTAVTETVECIRKVLDNEYPMEKFTMSKTL- 775
Query: 805 KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKG--AKAYERSEDPIYVL 862
KTG E + H+ ++ ++ +R P+ G RVP+V I+ K K R+EDP +
Sbjct: 776 KTGYKNECQ-PHLHVSNKIFERTGFPVPS-GARVPFVYIEDKKNLDTKQSFRAEDPTFAQ 833
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPILKNASKELL 898
EN++ +D +Y+E+Q+ KP+ +FEP+L + E+
Sbjct: 834 ENDLIVDRLFYIEHQLMKPICSLFEPLLDDPETEIF 869
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 30/282 (10%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I IFG T +G +VC + F P+F + P+ + F I E M+ +A R S +P
Sbjct: 27 INIFGKTMDGKTVCVRAK-FTPFFLLETPESWSAARTNLF--ITETAMKYDAIRPSCLP- 82
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
+++++ Y K +P ++ V + + + L Q+ YE
Sbjct: 83 -------TKRKNMWGYDGGKMRPMVQFVFKTLSQMRKAKYRLKNEYQI----------YE 125
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
S+V +R NI +W+ V K +S +E + + + + +
Sbjct: 126 SSVDPIIRIFHLRNINPADWMHV--SKAFPVETRISNSDIEVETSFQHL----GPSDLKE 179
Query: 299 MAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
+ P I S+DIE + FP E D IQ+A GE +P+ R V+ K A +
Sbjct: 180 VPPLIIASWDIETYSKDRKFPLAENPADYCIQIATTFQKYGEPEPYRRVVVCYKQTASVE 239
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
GV+++S E DV+ W +++ DV IGYN+ ++DL Y+
Sbjct: 240 GVEIISCAEEADVMNTWMTILQDEITDVSIGYNLWQYDLRYI 281
>gi|429965585|gb|ELA47582.1| DNA polymerase (pol2) [Vavraia culicis 'floridensis']
Length = 1168
Score = 312 bits (800), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/356 (46%), Positives = 236/356 (66%), Gaps = 11/356 (3%)
Query: 399 IEKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPI 458
++KED+ + +I L +G+ +TRRR+AVYCLKD LP + +KL+ VEM RV GVPI
Sbjct: 466 MQKEDLPYYLIKGLFDGDDKTRRRIAVYCLKDTLLPLLIYEKLLIFITGVEMVRVLGVPI 525
Query: 459 SFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATL 518
+ +RG S+K+ +LR+A++ VIPNV ++G Y GA V+E G+Y++PIA L
Sbjct: 526 HWHFNRGISVKIFGLILREARKNGFVIPNV--TVKDEG-YMGAFVIEPERGYYDEPIAVL 582
Query: 519 DFASLYPSIMMAYNLCYSTLV--TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEI 576
DFASLYPSI++A+NLCYST++ T K + +P+G FVK +++ G+LP I
Sbjct: 583 DFASLYPSIIIAHNLCYSTMLLGTKHGIDK----SKDAEISPTGTYFVKKDVRVGLLPVI 638
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
LE++L RK K +K + + +L+ RQ A K+SANSVYGFTG+ V +LPCI+IS S
Sbjct: 639 LEKMLKKRKEVKEQMKNETNTFMRTLLNARQNAFKVSANSVYGFTGSAVSRLPCIDISQS 698
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVP--TVEAAMKLGRE 694
VT YGR+MI TK +VE F GY+ + VIYGDTDSVM++ +V+ ++ +E
Sbjct: 699 VTGYGREMIIKTKNVVESVFCRDKGYDFDGRVIYGDTDSVMIRIRKENLSVDYVFEIAKE 758
Query: 695 AADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRR 750
A +S F+KP+KLEFEKVY+PYLL++KKRYAG+ T E D++ +++ R
Sbjct: 759 MASKVSECFVKPVKLEFEKVYFPYLLMNKKRYAGVIETREEIKDEVKVSEVKSDSR 814
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/275 (44%), Positives = 180/275 (65%), Gaps = 7/275 (2%)
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLV 798
+MDTKGIETVRRDNC LVK+L+ ECL+ +L+ RD A +VK+ + DL ++R+DL LV
Sbjct: 897 RMDTKGIETVRRDNCKLVKSLIEECLNLLLIQRDPERAKSFVKAVVRDLYLDRIDLGQLV 956
Query: 799 ITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDP 858
I+K L+KT +Y K AHVELAERM+KRD A N+GDR+ YVI+ AYE+SEDP
Sbjct: 957 ISKTLSKT--NYAAKQAHVELAERMKKRDNAVI-NIGDRIAYVIVDKGPNVIAYEKSEDP 1013
Query: 859 IYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMK 918
+YVLE N+P+D +YY+E QI KP+ R+F+P++ N + EL G+HT + T S + +
Sbjct: 1014 LYVLEKNLPVDVNYYIEQQIMKPVHRLFDPLMDNVN-ELFVGEHTATRKKGTLSGP-MAQ 1071
Query: 919 FAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSL 978
F K+ ++C+ CK LC C +Y + +++E E ++ + W +CQ C S+
Sbjct: 1072 FVKKGITCLLCKE--RGPILCRRCAPNYFSVYVGKIQEMKEKEDVYNKCWRECQRCIRSV 1129
Query: 979 HQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWN 1013
+VLC ++DCPIF+ R K +++ E Q+ + N
Sbjct: 1130 CTEVLCANKDCPIFFMRSKVIREIGELDKQIKQLN 1164
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 126/305 (41%), Gaps = 73/305 (23%)
Query: 136 VHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQ 195
V F PYFY+ +DI +F SK V H ++K Y
Sbjct: 38 VTDFFPYFYVKIE--TDKNDILNFFM------------SKNIDVVSHKLSIKKNVYGYIS 83
Query: 196 QQKS--QPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNI 253
+ +S + F K +V +C + + +++N+ F L+FM+D I
Sbjct: 84 KNESFLKVFFKNIVVESAARRACENM--------------YEIFDANIPFNLQFMVDMGI 129
Query: 254 VGGNWIEVPV-----------------GKYRKTAKTLSYCQL--------EFDCLYSDII 288
VG +++EV + G + + + Q E + Y D I
Sbjct: 130 VGMSYLEVDMDMESGQELRIEDAGGANGVFSTSLDVHNGNQRIKRHKSEDEENTKYMDAI 189
Query: 289 -SRHPEGEFSK-------------MAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVT 334
S H G M F+ILSFD+E R+ FP+ + D +IQ+ N V
Sbjct: 190 CSTHRIGRVYHVSHRAIRPILKDCMPVFKILSFDLEVNNRENKFPDSSIDEIIQIGNTVK 249
Query: 335 LQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFD 394
KQ + ++ A I GVDV S++TER+++ W F+ DPDV +GYNI FD
Sbjct: 250 QHEYKQT----IFCQRNTAGIAGVDVRSYDTEREMIEEWIKFVYYEDPDVFLGYNISGFD 305
Query: 395 LPYLI 399
Y+I
Sbjct: 306 FDYII 310
>gi|413925535|gb|AFW65467.1| hypothetical protein ZEAMMB73_973822, partial [Zea mays]
Length = 292
Score = 309 bits (792), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 146/206 (70%), Positives = 166/206 (80%), Gaps = 20/206 (9%)
Query: 219 ILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQ- 277
IL+RGI ++GLG KSF+TYESN+LFALRFMIDCNIVGGNWIE+P GKYRK A +SY
Sbjct: 1 ILERGITIEGLGSKSFLTYESNILFALRFMIDCNIVGGNWIELPAGKYRKAACIMSYFMS 60
Query: 278 -LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQV------- 329
L YSD++S EGE+SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQV
Sbjct: 61 ILNTTNRYSDLVSHAAEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVEFIIHVS 120
Query: 330 -----------ANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIR 378
ANLVT QGE QPF+RNVMTLKSC+PIVGV+VMSF+ ERD+LLAWRDFIR
Sbjct: 121 DTRYHLVSIQIANLVTHQGEDQPFVRNVMTLKSCSPIVGVEVMSFDAERDILLAWRDFIR 180
Query: 379 EVDPDVMIGYNICKFDLPYLIEKEDV 404
EVDPD++IGYNICKFD+PYLIE+ +V
Sbjct: 181 EVDPDIIIGYNICKFDMPYLIERAEV 206
>gi|356927831|gb|AET42621.1| DNA-directed DNA polymerase [Emiliania huxleyi virus 202]
Length = 1016
Score = 306 bits (784), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 210/515 (40%), Positives = 290/515 (56%), Gaps = 29/515 (5%)
Query: 385 MIGYNICKFDLPYLIEKEDVHHSIISDLQNG-NAETRRRLAVYCLKDAYLPQRLLDKLMF 443
IG N K DLPY + ++ G E R A YC+ D LP RL+ L
Sbjct: 418 FIGEN--KVDLPY--------QEMFDCVRPGATPEEVARAAAYCMGDVLLPIRLMRALQV 467
Query: 444 IFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATV 503
+ VEM+RVT I+ L+ RGQSIKV+ Q+ R + Q V+ V + + G YEGA V
Sbjct: 468 MPGMVEMSRVTYTTINQLVFRGQSIKVMQQITRYSHQLGHVVNPVPRPINTSG-YEGAIV 526
Query: 504 LEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETF 563
++A++GFY P+ATLDFASLYPSIM+A+NLCYST V R + E +P+ E
Sbjct: 527 IDAKSGFYTDPVATLDFASLYPSIMLAHNLCYSTFVEKGTPRVEGVEYETHKISPTEEYT 586
Query: 564 VKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGA 623
N+ G+L +L+ LL ARK+AK + AK P EKA+ + RQLALKIS NS+YGF GA
Sbjct: 587 FALNV-PGVLTHMLKHLLGARKKAKKQMAAAKTPEEKAIYNARQLALKISCNSIYGFCGA 645
Query: 624 -TVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGV 682
+G+ P I+ T GR+MI T ++ + F AE+IYGDTDSV V+
Sbjct: 646 EKLGKYPLGAIAKCTTFNGRKMINKTSEMAIELFKP-----WIAEIIYGDTDSVFVRIRD 700
Query: 683 P-----TVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRY-AGLYWTNPEK 736
T K+G A IS +F + I+LE EKVY +LLI+KKRY G+Y N
Sbjct: 701 KDGRELTPAEVFKVGEYVAQKISDSFREDIELEMEKVYSGFLLITKKRYFGGMYEPNKAG 760
Query: 737 ---FDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMD 793
F K+D KG+E VRRDNC L+K+L + + ++ D+D A+ VK + ++ + +
Sbjct: 761 DVVFSKVDAKGVELVRRDNCQLLKSLYKKIVDSLVFDKDPLKALAAVKEALDRVVNDEVP 820
Query: 794 LSLLVITKGLTKTGDDYEVKAAHVELAERMRKR-DAATAPNVGDRVPYVIIKAAKGAKAY 852
+ITK L K K V LA+++ R + P GDR+P+VI
Sbjct: 821 YEEYIITKELRKEESYANPKQEQVVLAKKISARTNGGVTPQPGDRIPFVIRYDKHAKHIC 880
Query: 853 ERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
ER+ED Y+ EN+IP+D YY+ N+ISKP+L IF+
Sbjct: 881 ERAEDLDYLRENDIPLDRLYYITNKISKPVLTIFQ 915
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 28/294 (9%)
Query: 118 AIIRIFGVTRE-GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKV 176
A+ +FG G SVC KV F P Y + + + ++I E + + ++KV
Sbjct: 71 AVAYLFGAEEHTGASVCVKVDKFRPVLYYHTSESVS----TLKNKIGESLNLKGDIDAKV 126
Query: 177 PQFVRHIEMVQKRSIMYY---QQQKSQPFLKIV-VALPTMVASCRGILDRGIQLDGLGMK 232
+ +KR+ ++ + S ++IV V+ P+ V+ + R + L +
Sbjct: 127 --------IKRKRTYGFHPDKENSTSHEQIRIVEVSFPS-VSKMKAACYRSGDKEPLETR 177
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
+E V FM + W ++ K T +S+C +EF+ S+ + P
Sbjct: 178 LPKPWEQGVDPGSMFMERNGLTPCGWFKMKACK-TVTKHKVSHCTMEFEV--SNPKNIEP 234
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFP----EPTHDPVIQVANLVTLQGEKQPFIRNVMT 348
+ K+AP I S+D E FP + H +I VA L + ++
Sbjct: 235 V-DLDKIAPILIASYDFEMYSESRGFPMADKQGDHIAIIGVA-FWRLGTSVEDATTVLLC 292
Query: 349 LKSCAPIVGVDVMSFETERDVLLAWRDFIR-EVDPDVMIGYNICKFDLPYLIEK 401
L CAP+ V ++TE D+ A+RD I D DV GYNI FD Y+ +
Sbjct: 293 LNDCAPVENAHVECYKTEADLYNAFRDLITVHSDADVCTGYNIFGFDNEYITTR 346
>gi|449532649|ref|XP_004173293.1| PREDICTED: DNA polymerase delta catalytic subunit-like, partial
[Cucumis sativus]
Length = 166
Score = 305 bits (781), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 144/166 (86%), Positives = 154/166 (92%), Gaps = 2/166 (1%)
Query: 851 AYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISIST 910
AYERSEDPIYVLEN+IPID YYLENQISKPLLRIFEPILKNASKELL G HTRSI IST
Sbjct: 1 AYERSEDPIYVLENSIPIDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSIFIST 60
Query: 911 PSNSGIMKFAKRQLSCIGCKALI--SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLW 968
PSNSGIMKFAK+QL+CIGCKAL+ S+ TLCSHCKGREAELYCK V+ V +LE++FGRLW
Sbjct: 61 PSNSGIMKFAKKQLTCIGCKALLGKSDKTLCSHCKGREAELYCKAVANVSDLEMVFGRLW 120
Query: 969 TQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
TQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAK QL+RWNF
Sbjct: 121 TQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKEQLERWNF 166
>gi|73852500|ref|YP_293784.1| putative DNA polymerase delta catalytic subunit [Emiliania huxleyi
virus 86]
gi|72415216|emb|CAI65453.1| putative DNA polymerase delta catalytic subunit [Emiliania huxleyi
virus 86]
gi|347481855|gb|AEO97841.1| DNA polymerase [Emiliania huxleyi virus 84]
gi|347600480|gb|AEP14967.1| DNA polymerase [Emiliania huxleyi virus 88]
Length = 1012
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/477 (41%), Positives = 278/477 (58%), Gaps = 18/477 (3%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R A YC D LP RL+ L + +EM+RVT I+ L+ RGQSIKV+ Q+ R + Q
Sbjct: 446 RAAAYCKGDVLLPIRLMKALQVMPGMIEMSRVTFTTINQLVFRGQSIKVMQQITRYSHQL 505
Query: 482 NLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTP 541
V+ V + + G YEGA V++A++GFY P+ATLDFASLYPSIM+A+NLCYST V
Sbjct: 506 GHVVNPVPRPINTSG-YEGAIVIDAKSGFYTDPVATLDFASLYPSIMLAHNLCYSTFVEK 564
Query: 542 EDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKA 601
R + E +P+ E N+ G+L +L+ LL ARK+AK + AK P EKA
Sbjct: 565 GTPRVDGVEYETHKISPTEEYTFALNV-PGVLTHMLKYLLGARKKAKKQMAAAKTPEEKA 623
Query: 602 VLDGRQLALKISANSVYGFTGA-TVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVG 660
+ + RQLALKIS NS+YGF GA +G+ P I+ T GR+MI T ++ + F
Sbjct: 624 IYNARQLALKISCNSIYGFCGAEKLGKYPLGAIAKCTTFNGRKMINKTSEMAIELFKP-- 681
Query: 661 GYEHNAEVIYGDTDSVMVQFGVP-----TVEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
AE+IYGDTDSV V+ T K+G + A IS +F + I+LE EKVY
Sbjct: 682 ---WIAEIIYGDTDSVFVRVKDKNGKELTPAEVFKVGEDVAQKISDSFREDIELEMEKVY 738
Query: 716 YPYLLISKKRY-AGLYWTNPEK---FDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDR 771
+LLI+KKRY G++ N F K+D KG+E VRRDNC L+KNL + + ++ D+
Sbjct: 739 SGFLLITKKRYFGGMHEPNKAGDVVFSKVDAKGVELVRRDNCPLLKNLYKKIVDSLVFDK 798
Query: 772 DIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKR-DAAT 830
D A+ VK T+ ++ + + +ITK L K K + LA+++ R +
Sbjct: 799 DPLKAIASVKETLERVVNDEVPYEEYIITKELRKEESYANPKQEQLMLAKKISARTNGGV 858
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
P GDR+P+VI +R+ED Y+ ENNIP+D YY+ N+I+KP+L IF+
Sbjct: 859 TPQPGDRIPFVIRYDKHAKHICDRAEDLDYLRENNIPLDRLYYITNKITKPILTIFQ 915
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 30/295 (10%)
Query: 118 AIIRIFGVTRE-GHSVCCKVHGFEPYFYISCPQGMGPDDISHF-HQILEGRMREANRNSK 175
A+ +FG G +VC KV F P Y D +S ++I E + + ++K
Sbjct: 71 AVAYLFGAEEHTGATVCVKVDKFRPVLYYHTN-----DSVSTLKNKIDESLKLKGDIDAK 125
Query: 176 VPQFVRHIEMVQKRSIMYYQQQ---KSQPFLKIV-VALPTMVASCRGILDRGIQLDGLGM 231
V + +KR+ ++ + S ++IV V+ P+ V+ + R +
Sbjct: 126 V--------IKRKRTYGFHPDKDDSTSHEQIRIVEVSFPS-VSKMKAACYRSGDKEPPET 176
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRH 291
+ +E V FM + W ++ K T +S+C +EF+ S+ +
Sbjct: 177 RLPKPWEQGVDPGSMFMERNGLTPCGWFKMKACK-TITKHKISHCTMEFEV--SNPKNIQ 233
Query: 292 PEGEFSKMAPFRILSFDIECAGRKGHFP----EPTHDPVIQVANLVTLQGEKQPFIRNVM 347
P + K+AP I S+D E FP + H +I VA L + ++
Sbjct: 234 PV-DLDKIAPILIASYDFEMYSETRGFPMADRQGDHIAIIGVA-FWRLGTPVEDTKTVLL 291
Query: 348 TLKSCAPIVGVDVMSFETERDVLLAWRDFIR-EVDPDVMIGYNICKFDLPYLIEK 401
L CAP+ G V S+ TE ++ A+RD I D DV GYNI FD Y+ +
Sbjct: 292 CLNECAPVEGSYVESYNTEAELYNAFRDLITVHSDADVCTGYNIFGFDNEYITTR 346
>gi|386002196|ref|YP_005920495.1| DNA polymerase [Methanosaeta harundinacea 6Ac]
gi|357210252|gb|AET64872.1| DNA polymerase [Methanosaeta harundinacea 6Ac]
Length = 931
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 276/919 (30%), Positives = 412/919 (44%), Gaps = 180/919 (19%)
Query: 91 IMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQG 150
++FQ LD +YV + + P I+++FG T G V + GF PYFY
Sbjct: 1 MIFQILDANYVY---DPDGFP-------IVQLFGTTPSGRPVTVQASGFRPYFYARI--- 47
Query: 151 MGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALP 210
D ++G +RE ++ E V + + YQ++ S+ LK+V P
Sbjct: 48 ----DERRIDSAIDG-IREMGLSA---------EAVDRFRPVGYQRRPSK-MLKVVAKDP 92
Query: 211 TMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA 270
S R + + + G+ YE++VLF RF+ID ++ G W EV G
Sbjct: 93 K---SVRDFRESVLSVPGV----LEVYETDVLFKNRFLIDLDLGGMRWAEVEAGNGGSDL 145
Query: 271 KT----------LSYCQLEFDCLYSDII-----SRHPEGEFSK------MAPFRILSFDI 309
+T + Y L + + P E AP R L+FDI
Sbjct: 146 ETAPAGSATIGPVPYTSLRPAGAGPAVAGGAEREKVPGAEARGGAKAIPNAPLRTLAFDI 205
Query: 310 ECAGRKGHFPEPTHDPVIQVA-------------------------NLVTLQGEKQPFIR 344
EC G P P PVI V+ +++ GE+ R
Sbjct: 206 ECLPLHGAMPSPETSPVIMVSLAFDPPYKGREDLVLVGRDLDCPRGDVLCCGGERAMLAR 265
Query: 345 NVMTLKSCAP--IVGVDVMSFE----TERDVLL-----------AWR------------- 374
V LK P + G + F+ ER L WR
Sbjct: 266 FVEILKDYDPDVLAGYNSAEFDFPYLEERARRLNVEVRVGRDGGPWRVRKIVNQTRVEIT 325
Query: 375 -DFIREVDPDVMIGYNICKFDLPYL------IEKEDVHHSIISDLQNGNAETRRRLAVYC 427
+ ++ P V +++ ++ L +EK DV + L + + RL Y
Sbjct: 326 GRIVVDLLPLVRSSFSLKRYTLRNASLELLGVEKHDVDPKEMEALWTSSGDDFARLVSYS 385
Query: 428 LKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPN 487
+D+YL LL L + Y+ +A+ +G + ++ GQ+ V + L RK +++ VIP
Sbjct: 386 RRDSYLALHLLTDLQLLDKYIALAQTSGSLLQDVIDGGQTGMVENFLFRKFQERGRVIPP 445
Query: 488 VKQA------GSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTP 541
A ++ +G VLE + G E + LD+ SLYPSIMMA+NLCYST+VT
Sbjct: 446 KPDADLSSARAAQSSELKGGEVLEPKKGLVED-VLILDYRSLYPSIMMAHNLCYSTVVTD 504
Query: 542 EDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKA 601
E P V K PSG FV GI+P +L +LLA R K +K A + E++
Sbjct: 505 ERP-----PSGGVVKPPSGGEFVLPGEAPGIVPGVLSDLLAQRTDIKRRMKSASEE-ERS 558
Query: 602 VLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVE-------- 653
+LD +Q ALKI NS YG++G +L + ++++VTS+GR I +TK++VE
Sbjct: 559 ILDAQQYALKILLNSFYGYSGYARARLYSLPLANAVTSFGRTNILNTKRMVEEIGSVYVR 618
Query: 654 ---------------DKFTTVGGYEH-NAEVIYGDTDSVMVQF------GV-PTVEAAMK 690
D F VG ++ + V+YGDTDSV ++ GV PT+E A
Sbjct: 619 DGKALLPEEMASASGDSFPAVGEFKRFDLSVVYGDTDSVFIRLKPFGGSGVKPTLEEAEL 678
Query: 691 LGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW----TNPEKFDKMDTKGIE 746
+G + A+ ++ P++L FE L + KKRYA W E DK+ +G+E
Sbjct: 679 VGGKIAETVTSRLPPPMELVFEAFARRGLFLVKKRYA--LWVFEKVGGEWRDKIKVRGME 736
Query: 747 TVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSL-------LVI 799
TVRRD C L + L +L++ + AV KS I L R+DL LV+
Sbjct: 737 TVRRDWCELTSKTLNRSLELVLMEGRVEEAVDLAKSVIDRL--QRLDLRKDPEILEDLVL 794
Query: 800 TKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPI 859
T+ TK+ Y+ K HV+LAE+MR R P+VGDRVP+VI++ +R+EDP
Sbjct: 795 TRRYTKSTASYKNKQPHVQLAEKMRAR-GGPVPSVGDRVPFVIVRGR--GLFVDRAEDPS 851
Query: 860 YVLENNIPIDTHYYLENQI 878
Y LEN + IDT YY+ QI
Sbjct: 852 YALENGLLIDTDYYINKQI 870
>gi|241751690|ref|XP_002400982.1| DNA polymerase zeta catalytic subunit, putative [Ixodes scapularis]
gi|215508272|gb|EEC17726.1| DNA polymerase zeta catalytic subunit, putative [Ixodes scapularis]
Length = 745
Score = 303 bits (777), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 199/603 (33%), Positives = 316/603 (52%), Gaps = 46/603 (7%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
LLD+L + EMAR+ G+ +LSRG +V S +LR A+Q+ LV P+V+Q
Sbjct: 138 LLDRLDVVGKTSEMARIFGIQFFEVLSRGSQFRVESMMLRLARQRGLVALSPSVQQRARM 197
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPED----------- 543
+ V+E ++ Y P+A LDF SLYPS+M+A+N C+ST + D
Sbjct: 198 RAMEFIPLVMEPQSHLYTSPVAVLDFQSLYPSVMIAHNYCFSTCLGRLDHFGSGEPFVFG 257
Query: 544 -------ARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKD 596
LN+ E ++ +P+G FV+S++++G+LP++LEE+L R K +KE KD
Sbjct: 258 CSSLSVPVTLLNILREYISVSPAGVAFVQSSVRRGVLPQMLEEILNTRLMVKQSMKECKD 317
Query: 597 -PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVED 654
+ + VLD RQL LK+ +N YG+T A+ G++PC+E++ S+ S GR+ +E K VE
Sbjct: 318 DKVLRKVLDARQLGLKLISNVTYGYTAASFSGRMPCVELADSIVSKGRETLERAIKTVEA 377
Query: 655 KFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKV 714
+ GG +VIYGDTDS+ V T E A ++G+E A+ ++ KPIKL+FEKV
Sbjct: 378 T-SRWGG-----QVIYGDTDSMFVLLQGKTKEQAFQIGQEIAEVVTAQNPKPIKLKFEKV 431
Query: 715 YYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
Y P +L +KKRY G + +P++ + D KGIETVRRD C V L+ + L + ++
Sbjct: 432 YLPCVLQTKKRYVGFSYESPDQTEPTYDAKGIETVRRDTCPAVSKLLEKSLRLLFAAGEV 491
Query: 774 PGAVQYVKSTISDLLMNRMDLSLLVITK---GLTKTGDDYEVKAAHVELAERMRKRDAAT 830
Y+K S +L +++L + K GL+ V A +E+A RM ++D
Sbjct: 492 APVKNYLKLQFSKMLSEQVNLQDFIFAKEFRGLSGYKPGACVPA--LEIARRMVRKDPRL 549
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYV++ + G + + P+ VL + ++ ++ HYY+ + L R+ +
Sbjct: 550 EPRVGERVPYVVVYGSPGLRLIQLVRHPLEVLSDPSLRLNVHYYVTRAVGPALNRVLGLV 609
Query: 890 LKNASKELLSGDHTRSISISTPSNSG------IMKFAKRQLSCIGCKALISNGTLCSHCK 943
++A + G+ R S + G I ++ QL C C A LC CK
Sbjct: 610 GQDALQ--WYGELPRPASGTAGVVRGRGGPNTIGRYLVCQL-CPACGAQSPREGLCPSCK 666
Query: 944 GREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMA 1003
+V ++ + CQ C G + C S DCPI Y++ + +
Sbjct: 667 ADPGFAALALGDRVHRVQAALHDIQQICQSCMGFRGSE--CISTDCPILYKKARVTYEAK 724
Query: 1004 EAK 1006
+A+
Sbjct: 725 QAR 727
>gi|347482307|gb|AEO98248.1| DNA-directed DNA polymerase [Emiliania huxleyi virus 203]
gi|347601090|gb|AEP15576.1| DNA-directed DNA polymerase [Emiliania huxleyi virus 207]
gi|347601553|gb|AEP16038.1| DNA-directed DNA polymerase [Emiliania huxleyi virus 208]
gi|357972645|gb|AET97918.1| DNA polymerase [Emiliania huxleyi virus 201]
Length = 1012
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 198/477 (41%), Positives = 278/477 (58%), Gaps = 18/477 (3%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R A YC D LP RL+ L + +EM+RVT I+ L+ RGQSIKV+ Q+ R + Q
Sbjct: 446 RAAAYCKGDVLLPIRLMKALQVMPGMIEMSRVTFTTINQLVFRGQSIKVMQQITRYSHQL 505
Query: 482 NLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTP 541
V+ V + + G YEGA V++A++GFY P+ATLDFASLYPSIM+A+NLCYST V
Sbjct: 506 GHVVNPVPRPINTSG-YEGAIVIDAKSGFYTDPVATLDFASLYPSIMLAHNLCYSTFVEK 564
Query: 542 EDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKA 601
R + E +P+ E N+ G+L +L+ LL ARK+AK + AK P EKA
Sbjct: 565 GTPRVDGVEYETHKISPTEEYTFALNV-PGVLTHMLKYLLGARKKAKKQMAAAKTPEEKA 623
Query: 602 VLDGRQLALKISANSVYGFTGA-TVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVG 660
+ + RQLALKIS NS+YGF GA +G+ P I+ T GR+MI T ++ + F
Sbjct: 624 IYNARQLALKISCNSIYGFCGAEKLGKYPLGAIAKCTTFNGRKMINKTSEMAIELFKP-- 681
Query: 661 GYEHNAEVIYGDTDSVMVQFGVP-----TVEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
AE+IYGDTDSV V+ T K+G + A IS +F + I+LE EKVY
Sbjct: 682 ---WIAEIIYGDTDSVFVRVKDKNGKELTPSEVFKVGEDVAQKISDSFREDIELEMEKVY 738
Query: 716 YPYLLISKKRY-AGLYWTNPEK---FDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDR 771
+LLI+KKRY G++ N F K+D KG+E VRRDNC L+KNL + + ++ D+
Sbjct: 739 SGFLLITKKRYFGGMHEPNKAGDVVFSKVDAKGVELVRRDNCPLLKNLYKKIVDFLVFDK 798
Query: 772 DIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKR-DAAT 830
D A+ VK T+ ++ + + +ITK L K K + LA+++ R +
Sbjct: 799 DPLKALASVKETLERVVNDEVPYEEYIITKELRKEESYANPKQEQLMLAKKISARTNGGV 858
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
P GDR+P+VI +R+ED Y+ ENNIP+D YY+ N+I+KP+L IF+
Sbjct: 859 TPQPGDRIPFVIRYDKHAKHICDRAEDIDYLRENNIPLDRLYYITNKITKPILTIFQ 915
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 30/295 (10%)
Query: 118 AIIRIFGVTRE-GHSVCCKVHGFEPYFYISCPQGMGPDDISHF-HQILEGRMREANRNSK 175
A+ +FG G +VC KV F P Y D +S ++I E + + ++K
Sbjct: 71 AVAYLFGAEEHTGATVCVKVDKFRPVLYYHTN-----DSVSTLKNKIDESLNLKGDIDAK 125
Query: 176 VPQFVRHIEMVQKRSIMYYQQQ---KSQPFLKIV-VALPTMVASCRGILDRGIQLDGLGM 231
V + +KR+ ++ + S ++IV V+ P+ V+ + R +
Sbjct: 126 V--------IKRKRTYGFHPDKDDSTSHEQIRIVEVSFPS-VSKMKAACYRSGDKEPPET 176
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRH 291
+ +E V FM + W ++ K T +S+C +EF+ S+ +
Sbjct: 177 RLPKPWEQGVDPGSMFMERNGLTPCGWFKMKACK-TITKHKISHCTMEFEV--SNPKNIQ 233
Query: 292 PEGEFSKMAPFRILSFDIECAGRKGHFP----EPTHDPVIQVANLVTLQGEKQPFIRNVM 347
P + K+AP I S+D E FP + H +I VA L + ++
Sbjct: 234 PV-DLDKIAPILIASYDFEMYSETRGFPMADRQGDHIAIIGVA-FWRLGTPVEDTKTVLL 291
Query: 348 TLKSCAPIVGVDVMSFETERDVLLAWRDFIR-EVDPDVMIGYNICKFDLPYLIEK 401
L CAP+ G V S+ TE ++ A+RD I D DV GYNI FD Y+ +
Sbjct: 292 CLNECAPVEGSYVESYNTEAELYNAFRDLITVHSDADVCTGYNIFGFDNEYITTR 346
>gi|448932621|gb|AGE56179.1| DNA polymerase [Paramecium bursaria Chlorella virus NE-JV-1]
Length = 901
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 196/542 (36%), Positives = 304/542 (56%), Gaps = 31/542 (5%)
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYL-IEKEDVHHSIISDLQNGNAETRRRLAVYCL 428
LL W R +D Y++ YL +K+D+ I + G+A+ R +A Y
Sbjct: 334 LLQWLRKNRNLD-----SYSLNNVSKMYLGDQKDDLPAMQIFEKFEGDADDRAVIAKYAA 388
Query: 429 KDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNV 488
+D LP +L+ KL + EMA VP+ ++ RGQ ++ S L KA++ N IP+
Sbjct: 389 QDTLLPLKLMTKLAIFEDVTEMANAVNVPVDWINFRGQQVRAFSCLFGKAREMNYAIPDD 448
Query: 489 KQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLN 548
K A + +G +EGATVLE + G Y +PIA LDFASLYPSI+ A N+ TLV DAR N
Sbjct: 449 K-AWTTEGKFEGATVLEPKKGAYFEPIAALDFASLYPSIIRANNMSPETLVM--DARYAN 505
Query: 549 LPPECVNKTPSG-ETFVKSNLQKGILPEILEELLAARKRAK---ADLKEAKDPLEKAVLD 604
+P + +G TF S +G++P +L++L RK AK A + D ++A+ D
Sbjct: 506 IPGVEYYEIATGIGTFRYSQKSQGVVPALLDDLAKFRKNAKKLMAIAHKEGDEFKEALYD 565
Query: 605 GRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEH 664
Q + K+ NSVYGF GA G +PC+ I++SVT+ GR MI+ K ++
Sbjct: 566 ASQRSYKVVMNSVYGFLGANKGFIPCVPIAASVTATGRSMIDIAAKRAKELLP------- 618
Query: 665 NAEVIYGDTDSVMVQFGVPTVEAAMKLGR--EAADYISGTFIK----PIKLEFEKVYYPY 718
+E+IYGDTDS+MV+ +P+ + + E A +++G K P LEFEK+YYPY
Sbjct: 619 GSEIIYGDTDSIMVKMKLPSGKNQNDINDHFEVAKWLAGEITKEYKAPNDLEFEKIYYPY 678
Query: 719 LLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQ 778
+L SKKRYA + + +P + K+D KGI VRRD + + ++ E L IL +D AV
Sbjct: 679 ILFSKKRYAAVKFEDPSEKGKVDVKGIALVRRDFSPITREILKESLDTILFAQDKELAVT 738
Query: 779 YVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRV 838
+ I +L N + V++K L +TG E++ H+ +A ++ +R + P+ G RV
Sbjct: 739 DTRRKIRMVLDNEYPMEKFVMSKTL-RTGYKNEMQ-PHLIVANKIFERTSFPVPS-GARV 795
Query: 839 PYVIIKAAKG--AKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKE 896
P+V ++ AK R+EDP + +N + +D +Y+E+Q+ KPL+ +F+P+++N E
Sbjct: 796 PFVYVEDKNNIDAKQSMRAEDPTFAKDNGLIVDRLFYIEHQLMKPLISLFDPLVENPELE 855
Query: 897 LL 898
L
Sbjct: 856 LF 857
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 140/314 (44%), Gaps = 47/314 (14%)
Query: 92 MFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGM 151
M D+ GD N + I +FG T++G + C +V F P F + P+
Sbjct: 1 MIDVFPTDFRSGDENEQFK---------INLFGKTQDGLTACVRVR-FTPVFLLELPESW 50
Query: 152 GPDDISHFHQILEGRMR-EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALP 210
F I E ++ A ++ +P V+++S+ + K + + A P
Sbjct: 51 SDPRKKLF--ITETALKYGAVKDLCLP--------VKRKSLWGFDGGKERTLAQF--AFP 98
Query: 211 TM--VASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRK 268
++ + + L R Q+ YESN+ +R I W+++ +
Sbjct: 99 SLEKMKKAKYALKRSHQI----------YESNIDPIVRLFHIRKISPAGWVQI---RQSV 145
Query: 269 TAKT-LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFP---EPTHD 324
A T +S +E +C +S S +P + + P S+DIE R+ FP PT D
Sbjct: 146 PATTRISRSDIEIECNFS---SLYP-SDVTSPPPLVFASWDIETYSRERKFPLASNPT-D 200
Query: 325 PVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDV 384
V Q+A GE +PF R V+ K A + GV+++S E+DV+ AW D + E DV
Sbjct: 201 YVTQIATSFQRYGETEPFRRVVVCFKDTAEVDGVEIVSCVEEQDVINAWMDIVAEEKTDV 260
Query: 385 MIGYNICKFDLPYL 398
++GYN+ ++D Y+
Sbjct: 261 LLGYNVFQYDWKYV 274
>gi|283481253|emb|CAZ69369.1| putative DNA polymerase delta catalytic subunit [Emiliania huxleyi
virus 99B1]
Length = 1012
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 197/477 (41%), Positives = 278/477 (58%), Gaps = 18/477 (3%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R A YC D LP RL+ L + +EM+RVT I+ L+ RGQSIKV+ Q+ R + Q
Sbjct: 446 RAAEYCKGDVLLPIRLMKALQVMPGMIEMSRVTFTTINQLVFRGQSIKVMQQITRYSHQL 505
Query: 482 NLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTP 541
V+ V + + G YEGA V++A++GFY P+ATLDFASLYPSIM+A+NLCYST V
Sbjct: 506 GHVVNPVPRPINTSG-YEGAIVIDAKSGFYTDPVATLDFASLYPSIMLAHNLCYSTFVEK 564
Query: 542 EDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKA 601
R + E +P+ E N+ G+L +L+ LL ARK+AK + AK P EKA
Sbjct: 565 GTPRVDGVEYETHKISPTEEYTFALNV-PGVLTHMLKYLLGARKKAKKQMAAAKTPEEKA 623
Query: 602 VLDGRQLALKISANSVYGFTGA-TVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVG 660
+ + RQLALKIS NS+YGF GA +G+ P I+ T GR+MI T ++ + F
Sbjct: 624 IYNARQLALKISCNSIYGFCGAEKLGKYPLGAIAKCTTFNGRKMINKTSEMAIELFKP-- 681
Query: 661 GYEHNAEVIYGDTDSVMVQFGVP-----TVEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
AE+IYGDTDSV V+ T K+G + A IS +F + I+LE EKVY
Sbjct: 682 ---WIAEIIYGDTDSVFVRVKDKNGKELTPAEVFKVGEDVAQKISDSFREDIELEMEKVY 738
Query: 716 YPYLLISKKRY-AGLYWTNPEK---FDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDR 771
+LLI+KKRY G++ N F K+D KG+E VRRDNC L+KNL + + ++ D+
Sbjct: 739 SGFLLITKKRYFGGMHEPNKAGDVVFSKVDAKGVELVRRDNCPLLKNLYKKIVDSLVFDK 798
Query: 772 DIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKR-DAAT 830
+ A+ VK T+ ++ + + +ITK L K K + LA+++ R +
Sbjct: 799 NPLKALASVKETLERVVNDEVPYEEYIITKELRKEESYANPKQEQLMLAKKISARTNGGV 858
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
P GDR+P+VI +R+ED Y+ ENNIP+D YY+ N+I+KP+L IF+
Sbjct: 859 TPQPGDRIPFVIRYDKHAKHICDRAEDLDYLRENNIPLDRLYYITNKITKPILTIFQ 915
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 30/295 (10%)
Query: 118 AIIRIFGVTRE-GHSVCCKVHGFEPYFYISCPQGMGPDDISHF-HQILEGRMREANRNSK 175
A+ +FG G +VC KV F P Y D +S ++I E + + ++K
Sbjct: 71 AVAYLFGAEEHTGATVCVKVDKFRPVLYYHTN-----DSVSTLKNKIDESLKLKGDIDAK 125
Query: 176 VPQFVRHIEMVQKRSIMYYQQQ---KSQPFLKIV-VALPTMVASCRGILDRGIQLDGLGM 231
V + +KR+ ++ + S ++IV V+ P+ V+ + R +
Sbjct: 126 V--------IKRKRTYGFHPDKDDSTSHEQIRIVEVSFPS-VSKMKAACYRSGDKEPPET 176
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRH 291
+ +E V FM + W ++ K T +S+C +EF+ S+ +
Sbjct: 177 RLPKPWEQGVDPGSMFMERNGLTPCGWFKMKACK-TITKHKISHCTMEFEV--SNPKNIQ 233
Query: 292 PEGEFSKMAPFRILSFDIECAGRKGHFP----EPTHDPVIQVANLVTLQGEKQPFIRNVM 347
P + K+AP I S+D E FP + H +I VA L + ++
Sbjct: 234 PV-DLDKIAPILIASYDFEMYSETRGFPMADRQGDHIAIIGVA-FWRLGTPVEDTKTVLL 291
Query: 348 TLKSCAPIVGVDVMSFETERDVLLAWRDFIR-EVDPDVMIGYNICKFDLPYLIEK 401
L CAP+ G V S+ TE ++ A+RD I D DV GYNI FD Y+ +
Sbjct: 292 CLNECAPVEGSYVESYNTEAELYNAFRDLITVHSDADVCTGYNIFGFDNEYITTR 346
>gi|195327921|ref|XP_002030665.1| GM24454 [Drosophila sechellia]
gi|194119608|gb|EDW41651.1| GM24454 [Drosophila sechellia]
Length = 573
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 231/385 (60%), Gaps = 13/385 (3%)
Query: 25 QATTPTTPVIDDEFLDEDVFLDETLLPED-EESLILRDIEQRQDFASRLAKWARPPLSSG 83
A P P D+E +D + L ED +++L++ D + Q + R W+RPP
Sbjct: 14 HAKKPRNPDEDEE-MDFEAELAAFENSEDMDQTLLMGDGPENQTTSER---WSRPPPPEL 69
Query: 84 YVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYF 143
S+ ++ FQQLD++ +G + G ++R+FGVT EG+SVCC VHGF PYF
Sbjct: 70 DPSK-HNLEFQQLDVENYLGQPLPGMPGAQIGPVPVVRMFGVTMEGNSVCCHVHGFCPYF 128
Query: 144 YISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQP 201
YI P + L+ ++ RN+K V + V +E+V+K +I Y K Q
Sbjct: 129 YIEAPNQFEEHHCEKLQKALDQKVIADIRNNKDNVQEAVLMVELVEKLNIHGYNGDKKQR 188
Query: 202 FLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV 261
++KI V LP VA+ +L + + + + + +E+N+ F +RFM+D ++VG NWIE+
Sbjct: 189 YIKISVTLPRFVAAASRLLKKEVIMSEIDFQDCRAFENNIDFDIRFMVDTDVVGCNWIEL 248
Query: 262 PVGKYR---KTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKG 316
P+G +R +K L S CQ+E D + IS PEGE+SK+APFRILSFDIECAGRKG
Sbjct: 249 PIGHWRIRNSHSKPLPESRCQIEVDVAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKG 308
Query: 317 HFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDF 376
FPE DPVIQ+AN+V QGE++PFIRNV TL CAPI+G ++ + E +L W F
Sbjct: 309 IFPEAKMDPVIQIANMVIRQGEREPFIRNVFTLNECAPIIGSQLLCHDKETQMLDKWSAF 368
Query: 377 IREVDPDVMIGYNICKFDLPYLIEK 401
+REVDPD++ GYNI FD PYLI +
Sbjct: 369 VREVDPDILTGYNINNFDFPYLINR 393
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/97 (71%), Positives = 81/97 (83%), Gaps = 1/97 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLA+YCLKDAYLP RLL+KLM I NY+EMARVTGVP+
Sbjct: 469 QKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLEKLMAIVNYMEMARVTGVPLE 528
Query: 460 FLLSRGQSIKVLSQLLRKAK-QKNLVIPNVKQAGSEQ 495
LL+RGQ IKVLSQLLRKAK Q N P+ GS++
Sbjct: 529 SLLTRGQQIKVLSQLLRKAKTQGNSSCPSYTSQGSDE 565
>gi|344269498|ref|XP_003406589.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Loxodonta
africana]
Length = 989
Score = 300 bits (768), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/347 (45%), Positives = 214/347 (61%), Gaps = 21/347 (6%)
Query: 66 QDFASRL-AKWARP---PLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPL----SSGSA 117
Q F S L +W RP PL Q + ++FQQL+ID+ +G + LP S GS
Sbjct: 68 QFFPSTLDPRWGRPSPPPLDP----QMEPLIFQQLEIDHYVGPARPLPLPGTPPPSRGSV 123
Query: 118 AIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP 177
++R FGVT G SVCC +HGF PYFY G GP L + A+ +
Sbjct: 124 PVLRAFGVTDAGFSVCCHIHGFVPYFYTPAVPGSGPSTWR-----LAAELDAASAGQRGG 178
Query: 178 QFVRHIEMVQKRSIMY-YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMT 236
+ + ++ S M+ Y PFL+I +ALP +VA R +L++GI++ GLG SF
Sbjct: 179 RSSPELTVLAWESCMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVSGLGTPSFKP 238
Query: 237 YESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEFDCLYSDIISRHPEG 294
YE+NV F +RFM+D +IVG NW+E+P GKY R KT + CQLE D L+SD++S PEG
Sbjct: 239 YEANVDFEIRFMVDMDIVGCNWLELPAGKYVLRPEGKT-TLCQLEADVLWSDVVSHPPEG 297
Query: 295 EFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP 354
+ ++AP R+LSFDIECAGRKG FPEP DPVIQ+ +L GE +PF+R +TL+ CAP
Sbjct: 298 PWQRIAPLRVLSFDIECAGRKGIFPEPDRDPVIQICSLGLRWGEPEPFLRLALTLRPCAP 357
Query: 355 IVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
I+G V S+E E ++L AW F+ +DPDV+ GYNI FDLPYLI +
Sbjct: 358 ILGAKVQSYEREDELLQAWCTFVHLMDPDVITGYNIQNFDLPYLISR 404
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 79/90 (87%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDA+LP RLL++LM + N VEMARVTGVP+S
Sbjct: 480 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNSVEMARVTGVPLS 539
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK 489
+LL+RGQ +KV+SQLLR+A + LV+P VK
Sbjct: 540 YLLTRGQQVKVVSQLLRQAMSQVLVMPVVK 569
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 63/81 (77%)
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SVT +GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREA
Sbjct: 572 SVTGFGRQMIEKTKQLVESKYTVENGYSADAKVVYGDTDSVMCRFGVSSVAEAMALGREA 631
Query: 696 ADYISGTFIKPIKLEFEKVYY 716
AD++SG F PI+LEFEK Y
Sbjct: 632 ADWVSGHFPPPIRLEFEKXAY 652
Score = 102 bits (255), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
Query: 851 AYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKE--LLSGDHTRSISI 908
AY +SEDP++VLE+++PIDT YYLE Q++KPLLRIFEPIL E LL G+HTR ++
Sbjct: 651 AYMKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGEHTRCKTV 710
Query: 909 STPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKG 944
T G++ FAKR+ CIGC+ L C + G
Sbjct: 711 LTGKVGGLLAFAKRRTCCIGCRLLDGPHFSCLYSDG 746
>gi|319919380|gb|ADV78258.1| DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 262/913 (28%), Positives = 423/913 (46%), Gaps = 153/913 (16%)
Query: 97 DIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI 156
DI+Y+ + ++P + +IR+FG T G +C V G Y Y P
Sbjct: 97 DIEYLPYNYRHHVIP----TGTVIRLFGKTVNGVKICVNVFGQLSYIYCEVPSE------ 146
Query: 157 SHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC 216
++ H +++ M E N+N V + MY + KI T +
Sbjct: 147 TYLHDVMKKYMYENNKNFTFST------AVDNKFSMYGFNRSPVTVYKITF---TDYFAA 197
Query: 217 RGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV---PVGKYRKTAKTL 273
R + G L+ +K YE++V RF ID + W V + +Y+ + ++L
Sbjct: 198 REV---GRMLEAQKIK---VYETSVDVLSRFYIDNDYPSFGWYTVQKYSINEYKFSNQSL 251
Query: 274 -------SYCQL------EFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH--- 317
C L E+DCL DI G F + + I K
Sbjct: 252 EISCFVKDLCPLDEDIWPEYDCLTFDIECMSESGGFPNASVQSDIVIQISAVLHKTGSDN 311
Query: 318 -----FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP--IVGVDVMSFETERDVL 370
F T DP I A++ E + ++ +K +P I G ++++F+ ++
Sbjct: 312 MDVHLFTLGTCDP-IDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLII 370
Query: 371 LAWR-------DFIR--------EVDPDVMIGYN-----------ICKFDLPYLI----- 399
A + +F + + D G+N IC P +
Sbjct: 371 RATKLYRLGVGEFTKLKKGLLCIKSTNDFKQGFNCIKTKVYASGMICIDFYPVCVGKITS 430
Query: 400 ---------------EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFI 444
KED+ + I + R ++ YC++D+ + + L K +
Sbjct: 431 DNYKLDTIANLCLGKHKEDMPYKRIPIEFISGSGGRCKVGRYCIQDSVIVKELFCKFNYH 490
Query: 445 FNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG---TYEGA 501
++++ +PI +++ GQ +V + +L + +++N++IP+ K A E G +Y+GA
Sbjct: 491 MEASAISKLAYLPIRKVINDGQQRRVFTCILHETRKRNMLIPD-KIAPRETGEDESYKGA 549
Query: 502 TVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV-TPEDARKLN---LPPECVNKT 557
TVL+ G+Y P+ +DFASLYPSIM+A NLCYSTL+ ED ++ + VNK
Sbjct: 550 TVLDPHVGYYASPVIVMDFASLYPSIMIANNLCYSTLILNDEDVTGIDEKDILTVHVNKN 609
Query: 558 PSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSV 617
+ FV+S++++ IL +L L RK KA +K +DP+ +LD +QLALK++ N+
Sbjct: 610 -TAYRFVRSSVRESILGTLLSRWLRKRKEVKARMKRCEDPMLALILDKQQLALKVTCNAF 668
Query: 618 YGFTGATVGQLPCIEISSSVTSYGRQMIEHT----------KKLVEDKFTTVGG---YEH 664
YGFTGA G LPC+ +++S+TS GR M+ T ++ V +KF+ G +
Sbjct: 669 YGFTGAVRGLLPCLPLAASITSIGRDMLRQTSDFINNVLSSREYVSEKFSLSDGDFQGDF 728
Query: 665 NAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISK 723
+ VIYGDTDSV V E + + A ++S FI+PIKLEFEK++ P +LI K
Sbjct: 729 SLNVIYGDTDSVFVCVKNIVPERLAGICADIAAHVSSQLFIEPIKLEFEKMFLPLMLICK 788
Query: 724 KRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKST 783
KRY G + + D++ KG+E VR+ +C VKN+V E + + D ++ A +
Sbjct: 789 KRYVGKMFDS----DELVMKGVELVRKTSCPFVKNIVKEIVRLLFWDSEVARAAVELSQM 844
Query: 784 ISD------------------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVE 818
D L N++D++ LV++ L+K Y + H+
Sbjct: 845 SCDEVIRNGLPAGIHKIIDIIIGARDRLYTNKVDVNELVLSTMLSKEISMYKQPDLPHLR 904
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAA-KGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
+ ER+R R+ P VGDRV YV+I + K YE SEDP+YV+ENNIPI+ Y E Q
Sbjct: 905 VIERLRNRNEE-VPVVGDRVSYVLISSMDKNVANYELSEDPLYVIENNIPINAERYFE-Q 962
Query: 878 ISKPLLRIFEPIL 890
+ K + I PI+
Sbjct: 963 LVKAVSNIICPII 975
>gi|8810232|gb|AAF80107.1|AF268039_1 DNA polymerase [porcine cytomegalovirus]
Length = 1007
Score = 299 bits (765), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 260/914 (28%), Positives = 421/914 (46%), Gaps = 155/914 (16%)
Query: 97 DIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI 156
DI+Y+ + ++P + +IR+FG T G +C V G Y Y P
Sbjct: 97 DIEYLPYNYRHHVIP----TGTVIRLFGKTVNGVKICVNVFGQLSYIYCEVPSE------ 146
Query: 157 SHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC 216
++ H +++ M E N+N F + K S+ + + V A
Sbjct: 147 TYLHDVMKKYMYENNKN-----FTFSTAVDNKFSMYGFNRSP-------VTVYKITFADY 194
Query: 217 RGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV---PVGKYRKTAKTL 273
+ G L+ +K YE++V RF ID + W V + +Y+ + ++L
Sbjct: 195 FAAREVGRMLEAQKIK---VYETSVDVLSRFYIDNDYPSFGWYTVQKYSINEYKFSNQSL 251
Query: 274 -------SYCQL------EFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH--- 317
C L E+DCL DI G F + + I K
Sbjct: 252 EISCSVKDLCPLDEDIWPEYDCLTFDIECMSESGGFPNASVQSDIVIQISAVLHKTGSDN 311
Query: 318 -----FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP--IVGVDVMSFETERDVL 370
F T DP I A++ E + ++ +K +P I G ++++F+ ++
Sbjct: 312 MDVHLFTLGTCDP-IDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLII 370
Query: 371 LAWRDF----------------IREVDPDVMIGYN-----------ICKFDLPYLI---- 399
A + + I+ + D G+N IC P +
Sbjct: 371 RATKLYRLGVGEFTKLKKGLLCIKSTN-DFKQGFNCIKTKVYASGMICIDFYPVCVGKIT 429
Query: 400 ----------------EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMF 443
KED+ + I + R ++ YC++D+ + + L K +
Sbjct: 430 SDNYKLDTIANLCLGKHKEDMPYKRIPIEFISGSGGRCKVGRYCIQDSMIVKELFCKFNY 489
Query: 444 IFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG---TYEG 500
++++ +PI +++ GQ +V + +L + +++N++IP+ K A E G +Y G
Sbjct: 490 HMEASAISKLAYLPIRKVINDGQQRRVFTCILHETRKRNMLIPD-KIAPRETGEDESYRG 548
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV-TPEDARKLN---LPPECVNK 556
ATVL+ G+Y P+ +DFASLYPSIM+A NLCYSTL+ ED ++ + VNK
Sbjct: 549 ATVLDPHVGYYASPVIVMDFASLYPSIMIANNLCYSTLILNDEDVTGIDEKDILTVHVNK 608
Query: 557 TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANS 616
+ FV+S++++ IL +L L RK KA +K +DP+ +LD +QLALK++ N+
Sbjct: 609 N-TVYRFVRSSVRESILGTLLSRWLRKRKEVKARMKRCEDPMLALILDKQQLALKVTCNA 667
Query: 617 VYGFTGATVGQLPCIEISSSVTSYGRQMIEHT----------KKLVEDKFTTVGG---YE 663
YGFTGA G LPC+ +++S+TS GR M+ T ++ V +KF+ G +
Sbjct: 668 FYGFTGAVHGLLPCLPLAASITSIGRDMLRQTSDFINNVLSSREYVSEKFSLSDGDFQGD 727
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLIS 722
+ VIYGDTDSV V E + + A ++S FI+PIKLEFEK++ P +LI
Sbjct: 728 FSLNVIYGDTDSVFVCVKNIVPERLAGICADIAAHVSSQLFIEPIKLEFEKMFLPLMLIC 787
Query: 723 KKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS 782
KKRY G + + D++ KG+E VR+ +C VKN+V E + + D ++ A +
Sbjct: 788 KKRYVGKMFDS----DELVMKGVELVRKTSCPFVKNIVKEIVRLLFWDSEVARAAVELSQ 843
Query: 783 TISD------------------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHV 817
D L N++D++ LV++ L+K Y + H+
Sbjct: 844 MSCDEVIRNGLPAGIHKIIDIIIGARDRLYTNKVDVNELVLSTMLSKEISMYKQPNLPHL 903
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAA-KGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
+ ER+R R+ P VGDRV YV+I + K YE SEDP+YV+ENNIPI+ Y E
Sbjct: 904 RVIERLRNRNEE-VPVVGDRVSYVLISSMDKNVANYELSEDPLYVIENNIPINAERYFE- 961
Query: 877 QISKPLLRIFEPIL 890
Q+ K + I PI+
Sbjct: 962 QLVKAVSNIICPII 975
>gi|337732497|gb|AEI71770.1| DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 298 bits (764), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 262/914 (28%), Positives = 423/914 (46%), Gaps = 155/914 (16%)
Query: 97 DIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI 156
DI+Y+ + ++P + +IR+FG T G +C V G Y Y P
Sbjct: 97 DIEYLPYNYRHHVIP----TGTVIRLFGKTVNGVKICVNVFGQLSYIYCEVPSE------ 146
Query: 157 SHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC 216
++ H +++ M E N+N V + MY + KI T +
Sbjct: 147 TYLHDVMKKYMYENNKNFTFST------AVDNKFSMYGFNRSPVTVYKITF---TDYFAA 197
Query: 217 RGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV---PVGKYRKTAKTL 273
R + G L+ +K YE++V RF ID + W V + +Y+ + ++L
Sbjct: 198 REV---GRMLEAQKIK---VYETSVDVLSRFYIDNDYPSFGWYTVQKYSINEYKFSNQSL 251
Query: 274 -------SYCQL------EFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH--- 317
C L E+DCL DI G F + + I K
Sbjct: 252 EISCFVKDLCPLDEDIWPEYDCLTFDIECMSESGGFPNASVQSDIVIQISAVLHKTGSDN 311
Query: 318 -----FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP--IVGVDVMSFETERDVL 370
F T DP I A++ E + ++ +K +P I G ++++F+ ++
Sbjct: 312 MDVHLFTLGTCDP-IDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLII 370
Query: 371 LAWRDF----------------IREVDPDVMIGYN-----------ICKFDLPYLI---- 399
A + + I+ + D G+N IC P +
Sbjct: 371 RATKLYRLGVGEFTKLKKGLLCIKSTN-DFKQGFNCIKTKVYASGMICIDFYPVCVGKIT 429
Query: 400 ----------------EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMF 443
KED+ + I + R ++ YC++D+ + + L K +
Sbjct: 430 SDNYKLDTIANLCLGKHKEDMPYKRIPIEFISGSGGRCKVGRYCIQDSVIVKELFCKFNY 489
Query: 444 IFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG---TYEG 500
++++ +PI +++ GQ +V + +L + +++N++IP+ K A E G +Y+G
Sbjct: 490 HMEASAISKLAYLPIRKVINDGQQRRVFTCILHETRKRNMLIPD-KIAPRETGEDESYKG 548
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV-TPEDARKLN---LPPECVNK 556
ATVL+ G+Y P+ +DFASLYPSIM+A NLCYSTL+ ED ++ + VNK
Sbjct: 549 ATVLDPHVGYYASPVIVMDFASLYPSIMIANNLCYSTLILNDEDVTGIDEKDILTVHVNK 608
Query: 557 TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANS 616
+ FV+S++++ IL +L L RK KA +K +DP+ +LD +QLALK++ N+
Sbjct: 609 N-TVYRFVRSSVRESILGTLLSRWLRKRKEVKARMKRCEDPMLALILDKQQLALKVTCNA 667
Query: 617 VYGFTGATVGQLPCIEISSSVTSYGRQMIEHT----------KKLVEDKFTTVGG---YE 663
YGFTGA G LPC+ +++S+TS GR M+ T ++ V +KF+ G +
Sbjct: 668 FYGFTGAVRGLLPCLPLAASITSIGRDMLRQTSDFINNVLSSREYVSEKFSLSDGDFQGD 727
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLIS 722
+ VIYGDTDSV V E + + A ++S FI+PIKLEFEK++ P +LI
Sbjct: 728 FSLNVIYGDTDSVFVCVKNIVPERLAGICADIAAHVSSQLFIEPIKLEFEKMFLPLMLIC 787
Query: 723 KKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS 782
KKRY G + + D++ KG+E VR+ +C VKN+V E + + D ++ A +
Sbjct: 788 KKRYVGKMFDS----DELVMKGVELVRKTSCPFVKNIVKEIVRLLFWDSEVARAAVELSQ 843
Query: 783 TISD------------------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHV 817
D L N++D++ LV++ L+K Y + H+
Sbjct: 844 MSCDEVIRNGLPAGIHKIIDIIIGARDRLYTNKVDVNELVLSTMLSKEISMYKQPNLPHL 903
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAA-KGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
+ ER+R R+ P VGDRV YV+I + K YE SEDP+YV+ENNIPI+ Y E
Sbjct: 904 RVIERLRNRNEE-VPVVGDRVSYVLISSMDKNVANYELSEDPLYVIENNIPINAERYFE- 961
Query: 877 QISKPLLRIFEPIL 890
Q+ K + I PI+
Sbjct: 962 QLVKAVSNIICPII 975
>gi|8810239|gb|AAF80111.1|AF268042_2 DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 260/913 (28%), Positives = 419/913 (45%), Gaps = 153/913 (16%)
Query: 97 DIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI 156
DI+Y+ + ++P + +IR+FG T G +C V G Y Y P
Sbjct: 97 DIEYLPYNYRHHVIP----TGTVIRLFGKTVNGVKICVNVFGQLSYIYCEVPSE------ 146
Query: 157 SHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC 216
++ H +++ M E N+N F + K S+ + + V A
Sbjct: 147 TYLHDVMKKYMYENNKN-----FTFSTAVDNKFSMYGFNRSP-------VTVYKITFADY 194
Query: 217 RGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV---PVGKYRKTAKTL 273
+ G L+ +K YE+NV RF ID + W V + +Y+ + ++L
Sbjct: 195 FAAREVGRMLEAQKIK---VYETNVDVLSRFYIDNDYPSFGWYTVQKYSINEYKFSNQSL 251
Query: 274 -------SYCQL------EFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH--- 317
C L E+DCL DI G F + + I K
Sbjct: 252 EISCSVKDLCPLDEDIWPEYDCLTFDIECMSESGGFPNASVQSDIVIQISAVLHKTGSDN 311
Query: 318 -----FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP--IVGVDVMSFETERDVL 370
F T DP I A++ E + ++ +K +P I G ++++F+ ++
Sbjct: 312 MDVHLFTLGTCDP-IDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLII 370
Query: 371 LAWR-------DFIR--------EVDPDVMIGYN-----------ICKFDLPYLI----- 399
A + +F + + D G+N IC P +
Sbjct: 371 RATKLYRLGVGEFTKLKKGLLCIKSTNDFKQGFNCIKTKVYASGMICIDFYPVCVGKITS 430
Query: 400 ---------------EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFI 444
KED+ + I + R ++ YC++D+ + + L K +
Sbjct: 431 DNYKLDTIANLCLGKHKEDMPYKRIPIEFISGSGGRCKVGRYCIQDSVIVKELFCKFNYH 490
Query: 445 FNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG---TYEGA 501
++++ +PI +++ GQ +V + +L + +++N++IP+ K A E G +Y GA
Sbjct: 491 MEASAISKLAYLPIRKVINDGQQRRVFTCILHETRKRNMLIPD-KIAPRETGEDESYRGA 549
Query: 502 TVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV-TPEDARKLN---LPPECVNKT 557
TVL+ G+Y P+ +DFASLYPSIM+A NLCYSTL+ ED ++ + VNK
Sbjct: 550 TVLDPHVGYYASPVIVMDFASLYPSIMIANNLCYSTLILNDEDVTGIDEKDILTVHVNKN 609
Query: 558 PSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSV 617
+ FV+S +++ IL +L L RK KA +K +DP+ +LD +QLALK++ N+
Sbjct: 610 -TVYRFVRSGVRESILGTLLSRWLRKRKEVKARMKRCEDPMLALILDKQQLALKVTCNAF 668
Query: 618 YGFTGATVGQLPCIEISSSVTSYGRQMIEHT----------KKLVEDKFTTVGG---YEH 664
YGFTGA G LPC+ +++S+TS GR M+ T ++ V +KF G +
Sbjct: 669 YGFTGAVHGLLPCLPLAASITSIGRDMLRQTSDFINNVLSSREYVSEKFGLSDGDFQGDF 728
Query: 665 NAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISK 723
+ VIYGDTDSV V E + + + ++S FI+PIKLEFEK++ P +LI K
Sbjct: 729 SLNVIYGDTDSVFVCVKNIVPERLAGICADISAHVSSQLFIEPIKLEFEKMFLPLMLICK 788
Query: 724 KRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKST 783
KRY G + + D++ KG+E VR+ +C VKN+V E + + D ++ A +
Sbjct: 789 KRYVGKMFDS----DELVMKGVELVRKTSCPFVKNIVKEIVRLLFWDSEVARAAVELSQM 844
Query: 784 ISD------------------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVE 818
D L N++D++ LV++ L+K Y + H+
Sbjct: 845 SCDEVIRNGLPAGIHKIIDIIIGARDRLYTNKVDVNELVLSTMLSKEISMYKQPNLPHLR 904
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAA-KGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
+ ER+R R+ P VGDRV YV+I + K YE SEDP+YV+ENNIPI+ Y E Q
Sbjct: 905 VIERLRNRNEE-VPVVGDRVSYVLISSMDKNVANYELSEDPLYVIENNIPINAERYFE-Q 962
Query: 878 ISKPLLRIFEPIL 890
+ K + I PI+
Sbjct: 963 LVKAVSNIICPII 975
>gi|448927134|gb|AGE50708.1| DNA polymerase [Paramecium bursaria Chlorella virus CVB-1]
Length = 938
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 193/512 (37%), Positives = 295/512 (57%), Gaps = 27/512 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G E R +A Y +D LP +LL KL + EMA VP+
Sbjct: 393 QKDDLPAMQIFEKFEGGPEDRAVIAKYAAQDTLLPLKLLSKLAIFEDITEMANAVKVPVD 452
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ N IP+ K A + +G +EGATVLE + G Y PIA LD
Sbjct: 453 WIGFRGQQVRAFSCLFGKAREMNYAIPDDK-AWAAEGKFEGATVLEPKKGAYFTPIAALD 511
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ TLV D+R NLP + +G TF S +G++P +L+
Sbjct: 512 FASLYPSIIRAHNMSPETLVM--DSRYKNLPGVEYYEIGTGIGTFRYSQQSQGVVPALLD 569
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + A D ++A+ D Q + K+ NSVYGF GA+ G LPC+ I++
Sbjct: 570 DLAKFRKNAKKLMAAAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFLPCVPIAA 629
Query: 636 SVTSYGRQMIE-HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR- 693
SVT+ GR MI+ +++ +E +EVIYGDTDS+MV+ +P + +
Sbjct: 630 SVTATGRNMIDVASRRAIE--------LLPGSEVIYGDTDSIMVKMKLPEGKNQEDINDH 681
Query: 694 -EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
E A +++G K P LEFEK+YYPY+L SKKRYA + + +PE+ K+D KG+ V
Sbjct: 682 FEVAKWLAGEITKEYRAPNDLEFEKIYYPYILYSKKRYAAIKYEDPEEKGKVDVKGLALV 741
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRD + + ++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 742 RRDFSPITREILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGY 800
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKG--AKAYERSEDPIYVLENNI 866
+++ H+ +A ++ R + P+ G RVP+V ++ AK R+EDP Y ++N +
Sbjct: 801 KNQMQ-PHLIVANKIFDRTGSNVPS-GARVPFVYVEDKNNIDAKQSMRAEDPKYAMDNGL 858
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELL 898
+D YY+E+Q+ KPL +FEP++ + K++
Sbjct: 859 IVDRLYYIEHQLLKPLTSLFEPLVDHPEKDIF 890
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 140/321 (43%), Gaps = 44/321 (13%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I +FG T +G + C ++ F P F + P P F I E ++ A ++ +P
Sbjct: 53 ISLFGKTPDGKTACIRIR-FTPVFLLEMPATWSPSRQKLF--ITETVIKYGAIKDMCLP- 108
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V+K+S+ + + + A PT+ + G++ D + YE
Sbjct: 109 -------VKKKSMWGFDGGVMRNLAQF--AFPTLEKMRKA--KYGLKRD------YQIYE 151
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SNV +R I W+++ + +S +E DC ++ + + E +
Sbjct: 152 SNVDPIVRLFHIRKINPAGWVQIK--QSYPVMTRISRSDIEVDCNFTTVSA----SEITT 205
Query: 299 MAPFRILSFDIECAGRKGHFP---EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
P I S+DIE ++ FP PT D V Q+A GE++P+ R V+ K +
Sbjct: 206 PPPLVIASWDIETYSKERKFPLSSNPT-DYVTQIATSFQRYGEEEPYRRVVVCFKDTGKV 264
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY-------LIEKEDVHHSI 408
GV+++S E+D++ AW + E DV+IGYN+ ++D Y L++ ++
Sbjct: 265 DGVEIVSCSEEQDMINAWMAIVSEEKTDVLIGYNVFQYDWKYVSGRAQMLVDDASADDTV 324
Query: 409 ISD-----LQNGNAETRRRLA 424
D L+ G A R LA
Sbjct: 325 FVDTLGRLLEGGGAVVERELA 345
>gi|448929493|gb|AGE53060.1| DNA polymerase [Paramecium bursaria Chlorella virus Fr5L]
Length = 904
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 293/513 (57%), Gaps = 27/513 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G E R +A Y +D LP +LL KL + EMA VP+
Sbjct: 362 QKDDLPAMKIFEKFEGGPEDRAVIAKYAAQDTLLPLKLLSKLAIFEDITEMANAVKVPVD 421
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ N IP+ K A + +G +EGATVLE + G Y PIA LD
Sbjct: 422 WIGFRGQQVRAFSCLFGKAREMNYAIPDDK-AWAAEGKFEGATVLEPKKGAYFTPIAALD 480
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ TLV DAR NLP + +G TF S +G++P +L+
Sbjct: 481 FASLYPSIIRAHNMSPETLVM--DARYKNLPGVEYYEIGTGIGTFRYSQQSQGVVPALLD 538
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + A D ++A+ D Q + K+ NSVYGF GA+ G LPC+ I++
Sbjct: 539 DLAKFRKNAKKLMAAAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFLPCVPIAA 598
Query: 636 SVTSYGRQMIE-HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR- 693
SVT+ GR MI+ +++ +E +EVIYGDTDS+MV+ +P + +
Sbjct: 599 SVTATGRNMIDVASRRAIE--------LLPGSEVIYGDTDSIMVKMKLPEGKNQEDINDH 650
Query: 694 -EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
E A +++G K P LEFEK+YYPY+L SKKRYA + + +PE+ K+D KG+ V
Sbjct: 651 FEVAKWLAGEITKEYRAPNDLEFEKIYYPYILYSKKRYAAIKYEDPEEKGKVDVKGLALV 710
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRD + + ++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 711 RRDFSPITREILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGY 769
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII--KAAKGAKAYERSEDPIYVLENNI 866
E++ H+ +A ++ R P+ G RVP+V + K AK R+EDP Y ++N +
Sbjct: 770 KNEMQ-PHLIVANKIFDRTGFPVPS-GARVPFVYVEDKDNIDAKQSMRAEDPKYAMDNGL 827
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+ +Q+ KPL +FEP++ + KEL
Sbjct: 828 IVDRLFYINHQLLKPLTSLFEPLVDHPEKELFG 860
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 44/321 (13%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I +FG T +G + C ++ F P F + P P F I E ++ A ++ +P
Sbjct: 22 INLFGKTPDGKTACIRIR-FTPVFLLEMPATWSPSRQKLF--ITETAIKYGAIKDMCLP- 77
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V+K+S+ + + + A PT+ + G++ D + YE
Sbjct: 78 -------VKKKSMWGFDGGVMRNMAQF--AFPTLEKMRKA--KYGLKRD------YQIYE 120
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SNV +R I W+++ + +S +E DC ++ + E +
Sbjct: 121 SNVDPIVRLFHIRKINPAGWVQIK--QSYPVMTRISRSDIEVDCNFTTVCG----SELTT 174
Query: 299 MAPFRILSFDIECAGRKGHFP---EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
P I S+DIE ++ FP PT D V Q+A GE++P+ R V+ K +
Sbjct: 175 PPPLVIASWDIETYSKERKFPLSSNPT-DYVTQIATSFQRYGEEEPYRRVVVCFKDTGKV 233
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY-------LIEKEDVHHSI 408
GV+++S E+D++ AW + E DV+IGYN+ ++D Y L++ ++
Sbjct: 234 DGVEIVSCSEEQDMINAWMTIVSEEKTDVLIGYNVFQYDWKYVSGRAQMLVDDASADDTV 293
Query: 409 ISD-----LQNGNAETRRRLA 424
D L+ G A R LA
Sbjct: 294 FVDTLGRLLEGGGAVVERELA 314
>gi|301615023|ref|XP_002936975.1| PREDICTED: DNA polymerase zeta catalytic subunit [Xenopus (Silurana)
tropicalis]
Length = 3130
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 211/616 (34%), Positives = 319/616 (51%), Gaps = 38/616 (6%)
Query: 420 RRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAK 479
R R A Y + + ++L+KL I E+AR+ G+ +L+RG +V S +LR AK
Sbjct: 2513 RWRTADYYMCRVHGSLQVLEKLDLIGRTSELARLFGIQFLHVLTRGSQYRVESMMLRIAK 2572
Query: 480 QKNLV--IPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST 537
N + P+++Q + V+E + FY I LDF SLYPSI++AYN CYST
Sbjct: 2573 PMNYIPLTPSIQQRSQMRAPQCIPLVMEPESRFYSNCILVLDFQSLYPSIVIAYNYCYST 2632
Query: 538 -------LVTPEDAR----KLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEE 579
L ED + L +PP+ + +P+G FVK+ ++KG+LP +LEE
Sbjct: 2633 CLGNIENLGKYEDFKFGCSSLQVPPDLLYQLRHDITVSPNGVAFVKACVRKGVLPRMLEE 2692
Query: 580 LLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSV 637
+L R K +K+ K D +LD RQL LK+ AN +G+T A G++PC+EI S+
Sbjct: 2693 ILKTRIMVKQSMKKYKHDKGLTRLLDARQLGLKLIANVTFGYTAANYSGRMPCVEIGDSI 2752
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
R+ +E KLV D T G A+V+YGDTDS+ V T E + K+G+E A+
Sbjct: 2753 VHKARETLERAIKLVND--TKKWG----AKVVYGDTDSMFVLLKGATKEQSFKIGQEIAE 2806
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLV 756
++ T KPIKL+FEKVY P +L +KKRY G +Y T +K D KGIETVRRD C V
Sbjct: 2807 AVTATNPKPIKLKFEKVYLPCVLQTKKRYVGYMYETVDQKDPVFDAKGIETVRRDACPAV 2866
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA- 815
++ L + RDI QYV+ L+ + + L+ K + Y+ A
Sbjct: 2867 GKILERSLKLLFETRDISQIKQYVQKQCIKLVEGKASMQDLIFAKEY-RGSFAYKPGACV 2925
Query: 816 -HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYY 873
+EL +M D + P VG+RVPYVII + G + PI VL++ N+ ++ YY
Sbjct: 2926 PALELTRKMVAYDRRSEPRVGERVPYVIIYGSPGVPLIQLVRRPIDVLQDHNLRLNGTYY 2985
Query: 874 LENQISKPLLRIFEPI---LKNASKELLSGDHTRSISIS-TPSNSGIMKFAKRQLSCIGC 929
+ QI PL RIF I + + EL T S + + + G + L C C
Sbjct: 2986 ITKQILPPLNRIFSLIGVDVFSWYDELPRIQKTFSTARNEQEARKGTISQYFTTLHCPVC 3045
Query: 930 KALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
L +G +CS C+ + + +++ELE +L C+ C G +Q + C S +C
Sbjct: 3046 DELTQHG-ICSKCRSQPQHVVVILNQEIRELEYKQDQLAKLCRNCTGCSNQQIQCVSLNC 3104
Query: 990 PIFYRRKKAQKDMAEA 1005
P+ ++ + +++ +A
Sbjct: 3105 PVLFKLSRVSRELCKA 3120
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF-HQILEGRMREAN----RNSKVP 177
FG T G C +HG PY Y G G D + QI R N S
Sbjct: 41 FGATPAGQRACLHLHGIFPYLYTPY-DGYGQQDPERYLRQIAFSIDRALNVALGNPSANS 99
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
Q V I +V Y +++ Q F+KI + P MV +L G ++ K + ++
Sbjct: 100 QHVFKITVVSGVPFYGYHEKERQ-FMKIYLYNPVMVKRVSELLQGGAVMN----KCYQSH 154
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
E++V + L+ ID N+ G N I + K+R+ +
Sbjct: 155 EAHVPYLLQLFIDYNLYGMNLINLAAVKFRRVQR 188
>gi|448929151|gb|AGE52719.1| DNA polymerase [Paramecium bursaria Chlorella virus CZ-2]
Length = 904
Score = 296 bits (758), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 293/513 (57%), Gaps = 27/513 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G E R +A Y +D LP +LL KL + EMA VP+
Sbjct: 362 QKDDLPAMKIFEKFEGGPEDRAVIAKYAAQDTLLPLKLLSKLAIFEDITEMANAVKVPVD 421
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ N IP+ K A + +G +EGATVLE + G Y PIA LD
Sbjct: 422 WIGFRGQQVRAFSCLFGKAREMNYAIPDDK-AWAAEGKFEGATVLEPKKGAYFTPIAALD 480
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ TLV DAR NLP + +G TF S +G++P +L+
Sbjct: 481 FASLYPSIIRAHNMSPETLVM--DARYKNLPGVEYYEIGTGIGTFRYSQQSQGVVPALLD 538
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + A D ++A+ D Q + K+ NSVYGF GA+ G LPC+ I++
Sbjct: 539 DLAKFRKNAKKLMAAAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFLPCVPIAA 598
Query: 636 SVTSYGRQMIE-HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR- 693
SVT+ GR MI+ +++ +E +EVIYGDTDS+MV+ +P + +
Sbjct: 599 SVTATGRNMIDVASRRAIE--------LLPGSEVIYGDTDSIMVKMKLPEGKNQEDINDH 650
Query: 694 -EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
E A +++G K P LEFEK+YYPY+L SKKRYA + + +PE+ K+D KG+ V
Sbjct: 651 FEVAKWLAGEITKEYRAPNDLEFEKIYYPYILYSKKRYAAIKYEDPEEKGKVDVKGLALV 710
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRD + + ++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 711 RRDFSPITREILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGY 769
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII--KAAKGAKAYERSEDPIYVLENNI 866
E++ H+ +A ++ R P+ G RVP+V + K AK R+EDP Y ++N +
Sbjct: 770 KNEMQ-PHLIVANKIFDRTGFPVPS-GARVPFVYVEDKDNIDAKQSMRAEDPKYAMDNGL 827
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+ +Q+ KPL +FEP++ + KEL
Sbjct: 828 IVDRLFYINHQLLKPLTSLFEPLVDHPEKELFG 860
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 44/321 (13%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I +FG T +G + C ++ F P F + P P F I E ++ A ++ +P
Sbjct: 22 INLFGKTPDGKTACIRIR-FTPVFLLEMPATWSPSRQKLF--ITETAIKYGAIKDMCLP- 77
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V+K+S+ + + + A PT+ + G++ D + YE
Sbjct: 78 -------VKKKSMWGFDGGVMRNLAQF--AFPTLEKMRKA--KYGLKRD------YQIYE 120
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SNV +R I W+++ + +S +E DC ++ + E +
Sbjct: 121 SNVDPIVRLFHIRKINPAGWVQIK--QSYPVMTRISRSDIEVDCNFTTVCG----SELTT 174
Query: 299 MAPFRILSFDIECAGRKGHFP---EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
P I S+DIE ++ FP PT D V Q+A GE++P+ R V+ K +
Sbjct: 175 PPPLVIASWDIETYSKERKFPLSSNPT-DYVTQIATSFQRYGEEEPYRRVVVCFKDTGKV 233
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY-------LIEKEDVHHSI 408
GV+++S E+D++ AW + E DV+IGYN+ ++D Y L++ ++
Sbjct: 234 DGVEIVSCSEEQDMINAWMTIVSEEKTDVLIGYNVFQYDWKYVSGRAQMLVDDASADDTV 293
Query: 409 ISD-----LQNGNAETRRRLA 424
D L+ G A R LA
Sbjct: 294 FVDTLGRLLEGGGAVVERELA 314
>gi|448925102|gb|AGE48682.1| DNA polymerase [Paramecium bursaria Chlorella virus AP110A]
Length = 907
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 293/513 (57%), Gaps = 27/513 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G E R +A Y +D LP +LL KL + EMA VP+
Sbjct: 362 QKDDLPAMKIFEKFEGGPEDRAVIAKYAAQDTLLPLKLLSKLAIFEDITEMANAVKVPVD 421
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ N IP+ K A + +G +EGATVLE + G Y PIA LD
Sbjct: 422 WIGFRGQQVRAFSCLFGKAREMNYAIPDDK-AWAAEGKFEGATVLEPKKGAYFTPIAALD 480
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ TLV DAR NLP + +G TF S +G++P +L+
Sbjct: 481 FASLYPSIIRAHNMSPETLVM--DARYKNLPGVEYYEIGTGIGTFRYSQQSQGVVPALLD 538
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + A D ++A+ D Q + K+ NSVYGF GA+ G LPC+ I++
Sbjct: 539 DLAKFRKNAKKLMAAAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFLPCVPIAA 598
Query: 636 SVTSYGRQMIE-HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR- 693
SVT+ GR MI+ +++ +E +EVIYGDTDS+MV+ +P + +
Sbjct: 599 SVTATGRNMIDVASRRAIE--------LLPGSEVIYGDTDSIMVKMKLPEGKNQEDINDH 650
Query: 694 -EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
E A +++G K P LEFEK+YYPY+L SKKRYA + + +PE+ K+D KG+ V
Sbjct: 651 FEVAKWLAGEITKEYRAPNDLEFEKIYYPYILYSKKRYAAIKYEDPEEKGKVDVKGLALV 710
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRD + + ++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 711 RRDFSPITREILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGY 769
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII--KAAKGAKAYERSEDPIYVLENNI 866
E++ H+ +A ++ R P+ G RVP+V + K AK R+EDP Y ++N +
Sbjct: 770 KNEMQ-PHLIVANKIFDRTGFPVPS-GARVPFVYVEDKDNIDAKQSMRAEDPKYAMDNGL 827
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+ +Q+ KPL +FEP++ + KEL
Sbjct: 828 IVDRLFYINHQLLKPLTSLFEPLVDHPEKELFG 860
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 44/321 (13%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I +FG T +G + C ++ F P F + P P F I E ++ A ++ +P
Sbjct: 22 INLFGKTPDGKTACIRIR-FTPVFLLELPAAWSPSRQKLF--ITETAIKYGAIKDMCLP- 77
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V+K+S+ + + + A PT+ + G++ D + YE
Sbjct: 78 -------VKKKSMWGFDGGVMRNLAQF--AFPTLEKMRKA--KYGLKRD------YQIYE 120
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SNV +R I W+++ + +S +E DC ++ + E +
Sbjct: 121 SNVDPIVRLFHIRKINPAGWVQIK--QSYPVMTRISRSDIEVDCNFTTVSG----SELTT 174
Query: 299 MAPFRILSFDIECAGRKGHFP---EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
P I S+DIE ++ FP PT D V Q+A GE++P+ R V+ K +
Sbjct: 175 PPPLVIASWDIETYSKERKFPLSSNPT-DYVTQIATSFQRYGEEEPYRRVVVCFKDTGKV 233
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY-------LIEKEDVHHSI 408
GV+++S E+D++ AW + E DV+IGYN+ ++D Y L++ ++
Sbjct: 234 EGVEIVSCSEEQDMINAWMTIVSEEKTDVLIGYNVFQYDWKYVSGRAQMLVDDASADDTV 293
Query: 409 ISD-----LQNGNAETRRRLA 424
D L+ G A R LA
Sbjct: 294 FVDTLGRLLEGGGAVVERELA 314
>gi|345778314|ref|XP_539084.3| PREDICTED: DNA polymerase zeta catalytic subunit isoform 1 [Canis
lupus familiaris]
Length = 3136
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 205/600 (34%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2535 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2594
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2595 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2654
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2655 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 2714
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2715 QDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2774
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2775 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2828
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2829 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2888
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2889 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSSSYKPGACVPALELTRKMLTYDRRS 2947
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2948 EPRVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 3007
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ N EL S S S P G + L C C L +G +CS C+ +
Sbjct: 3008 GIDVFNWYHELPRIQKATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 3066
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3067 PQHVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3126
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + P MV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKEKHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|155370121|ref|YP_001425655.1| hypothetical protein FR483_N023L [Paramecium bursaria Chlorella
virus FR483]
gi|155123441|gb|ABT15308.1| hypothetical protein FR483_N023L [Paramecium bursaria Chlorella
virus FR483]
Length = 936
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 196/512 (38%), Positives = 293/512 (57%), Gaps = 27/512 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G E R +A Y +D LP +LL KL + EMA VP+
Sbjct: 391 QKDDLPAMQIFEKFEGGPEDRAVIAKYAAQDTLLPLKLLSKLAIFEDITEMANAVKVPVD 450
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ N IP+ K A + +G +EGATVLE + G Y PIA LD
Sbjct: 451 WIGFRGQQVRAFSCLFGKAREMNYAIPDDK-AWAAEGKFEGATVLEPKKGAYFTPIAALD 509
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ TLV DAR NLP + +G TF S +G++P +L+
Sbjct: 510 FASLYPSIIRAHNMSPETLVM--DARYKNLPGVEYYEIGTGIGTFRYSQQSQGVVPALLD 567
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + A D ++A+ D Q + K+ NSVYGF GA+ G LPC+ I++
Sbjct: 568 DLAKFRKNAKKLMAAAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFLPCVPIAA 627
Query: 636 SVTSYGRQMIE-HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR- 693
SVT+ GR MI+ +++ +E +EVIYGDTDS+MV+ +P + +
Sbjct: 628 SVTATGRNMIDVASRRAIE--------LLPGSEVIYGDTDSIMVKMKLPEGKNQEDINDH 679
Query: 694 -EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
E A +++G K P LEFEK+YYPY+L SKKRYA + + +PE+ K+D KG+ V
Sbjct: 680 FEVAKWLAGEITKEYRAPNDLEFEKIYYPYILYSKKRYAAIKYEDPEEKGKVDVKGLALV 739
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRD + + ++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 740 RRDFSPITREILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGY 798
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII--KAAKGAKAYERSEDPIYVLENNI 866
E++ H+ +A ++ R P+ G RVP+V + K AK R+EDP Y ++N +
Sbjct: 799 KNEMQ-PHLIVANKIFDRTGFPVPS-GARVPFVYVEDKDNIDAKQSMRAEDPKYAMDNGL 856
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELL 898
+D +Y+ +Q+ KPL +FEP++ + KEL
Sbjct: 857 IVDRLFYINHQLLKPLTSLFEPLVDHPEKELF 888
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 44/321 (13%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I +FG T +G + C ++ F P F + P P F I E ++ A ++ +P
Sbjct: 51 INLFGKTPDGKTACIRIR-FTPVFLLELPAAWSPSRQKLF--ITETAIKYGAIKDMCLP- 106
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V+K+S+ + + + A PT+ + G++ D + YE
Sbjct: 107 -------VKKKSMWGFDGGVMRNLAQF--AFPTLEKMRKA--KYGLKRD------YQIYE 149
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SNV +R I W+++ + +S +E DC ++ + E +
Sbjct: 150 SNVDPIVRLFHIRKINPAGWVQIK--QSYPVMTRISRSDIEVDCNFTTV----SVSELTT 203
Query: 299 MAPFRILSFDIECAGRKGHFP---EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
P I S+DIE ++ FP PT D V Q+A GE++P+ R V+ K +
Sbjct: 204 PPPLVIASWDIETYSKERKFPLSSNPT-DYVTQIATSFQRYGEEEPYRRVVVCFKDTGKV 262
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY-------LIEKEDVHHSI 408
GV+++S E+D++ AW + E DV+IGYN+ ++D Y L++ ++
Sbjct: 263 DGVEIVSCSEEQDMINAWMTIVSEEKTDVLIGYNVFQYDWKYVSGRAQMLVDDASADDTV 322
Query: 409 ISD-----LQNGNAETRRRLA 424
D L+ G A R LA
Sbjct: 323 FVDTLGRLLEGGGAVVERELA 343
>gi|155121705|gb|ABT13573.1| hypothetical protein MT325_M019L [Paramecium bursaria chlorella
virus MT325]
Length = 907
Score = 296 bits (757), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 293/513 (57%), Gaps = 27/513 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G E R +A Y +D LP +LL KL + EMA VP+
Sbjct: 362 QKDDLPAMKIFEKFEGGPEDRAVIAKYAAQDTLLPLKLLSKLAIFEDITEMANAVKVPVD 421
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ N IP+ K A + +G +EGATVLE + G Y PIA LD
Sbjct: 422 WIGFRGQQVRAFSCLFGKAREMNYAIPDDK-AWAAEGKFEGATVLEPKKGAYFTPIAALD 480
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ TLV DAR NLP + +G TF S +G++P +L+
Sbjct: 481 FASLYPSIIRAHNMSPETLVM--DARYKNLPGVEYYEIGTGIGTFRYSQQSQGVVPALLD 538
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + A D ++A+ D Q + K+ NSVYGF GA+ G LPC+ I++
Sbjct: 539 DLAKFRKNAKKLMAAAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFLPCVPIAA 598
Query: 636 SVTSYGRQMIE-HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR- 693
SVT+ GR MI+ +++ +E +EVIYGDTDS+MV+ +P + +
Sbjct: 599 SVTATGRNMIDVASRRAIE--------LLPGSEVIYGDTDSIMVKMKLPEGKNQEDINDH 650
Query: 694 -EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
E A +++G K P LEFEK+YYPY+L SKKRYA + + +PE+ K+D KG+ V
Sbjct: 651 FEVAKWLAGEITKEYRAPNDLEFEKIYYPYILYSKKRYAAIKYEDPEEKGKVDVKGLALV 710
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRD + + ++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 711 RRDFSPITREILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGY 769
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII--KAAKGAKAYERSEDPIYVLENNI 866
E++ H+ +A ++ R P+ G RVP+V + K AK R+EDP Y ++N +
Sbjct: 770 KNEMQ-PHLIVANKIFDRTGFPVPS-GARVPFVYVEDKDNIDAKQSMRAEDPKYAMDNGL 827
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+ +Q+ KPL +FEP++ + KEL
Sbjct: 828 IVDRLFYINHQLLKPLTSLFEPLVDHPEKELFG 860
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 44/321 (13%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I +FG T +G + C ++ F P F + P P F I E ++ A ++ +P
Sbjct: 22 INLFGKTPDGKTACIRIR-FTPVFLLELPAAWSPSRQKLF--ITETAIKYGAIKDMCLP- 77
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V+K+S+ + + + A PT+ + G++ D + YE
Sbjct: 78 -------VKKKSMWGFDGGVMRNLAQF--AFPTLEKMRKA--KYGLKRD------YQIYE 120
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SNV +R I W+++ + +S +E DC ++ + E +
Sbjct: 121 SNVDPIVRLFHIRKINPAGWVQIK--QSYPVMTRISRSDIEVDCNFTTVSG----SELTT 174
Query: 299 MAPFRILSFDIECAGRKGHFP---EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
P I S+DIE ++ FP PT D V Q+A GE++P+ R V+ K +
Sbjct: 175 PPPLVIASWDIETYSKERKFPLSSNPT-DYVTQIATSFQRYGEEEPYRRVVVCFKDTGKV 233
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY-------LIEKEDVHHSI 408
GV+++S E+D++ AW + E DV+IGYN+ ++D Y L++ ++
Sbjct: 234 EGVEIVSCSEEQDMINAWMTIVSEEKTDVLIGYNVFQYDWKYVSGRAQMLVDDASADDTV 293
Query: 409 ISD-----LQNGNAETRRRLA 424
D L+ G A R LA
Sbjct: 294 FVDTLGRLLEGGGAVVERELA 314
>gi|448935405|gb|AGE58955.1| DNA polymerase [Paramecium bursaria Chlorella virus OR0704.2.2]
Length = 936
Score = 296 bits (757), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 293/513 (57%), Gaps = 27/513 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G E R +A Y +D LP +LL KL + EMA VP+
Sbjct: 391 QKDDLPAMKIFEKFEGGPEDRAVIAKYAAQDTLLPLKLLSKLAIFEDITEMANAVKVPVD 450
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ N IP+ K A + +G +EGATVLE + G Y PIA LD
Sbjct: 451 WIGFRGQQVRAFSCLFGKAREMNYAIPDDK-AWAAEGKFEGATVLEPKKGAYFTPIAALD 509
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ TLV DAR NLP + +G TF S +G++P +L+
Sbjct: 510 FASLYPSIIRAHNMSPETLVM--DARYKNLPGVEYYEIGTGIGTFRYSQQSQGVVPALLD 567
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + A D ++A+ D Q + K+ NSVYGF GA+ G LPC+ I++
Sbjct: 568 DLAKFRKNAKKLMAAAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFLPCVPIAA 627
Query: 636 SVTSYGRQMIE-HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR- 693
SVT+ GR MI+ +++ +E +EVIYGDTDS+MV+ +P + +
Sbjct: 628 SVTATGRNMIDVASRRAIE--------LLPGSEVIYGDTDSIMVKMKLPEGKNQEDINDH 679
Query: 694 -EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
E A +++G K P LEFEK+YYPY+L SKKRYA + + +PE+ K+D KG+ V
Sbjct: 680 FEVAKWLAGEITKEYRAPNDLEFEKIYYPYILYSKKRYAAIKYEDPEEKGKVDVKGLALV 739
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRD + + ++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 740 RRDFSPITREILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGY 798
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII--KAAKGAKAYERSEDPIYVLENNI 866
E++ H+ +A ++ R P+ G RVP+V + K AK R+EDP Y ++N +
Sbjct: 799 KNEMQ-PHLIVANKIFDRTGFPVPS-GARVPFVYVEDKDNIDAKQSMRAEDPKYAMDNGL 856
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+ +Q+ KPL +FEP++ + KEL
Sbjct: 857 IVDRLFYINHQLLKPLTSLFEPLVDHPEKELFG 889
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 44/321 (13%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I +FG T +G + C ++ F P F + P P F I E ++ A ++ +P
Sbjct: 51 INLFGKTPDGKTACIRIR-FTPVFLLEMPATWSPSRQKLF--ITETAIKYGAIKDMCLP- 106
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V+K+S+ + + + A PT+ + G++ D + YE
Sbjct: 107 -------VKKKSMWGFDGGVMRNLAQF--AFPTLEKMRKA--KYGLKRD------YQIYE 149
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SNV +R I W+++ + +S +E DC ++ + E +
Sbjct: 150 SNVDPIVRLFHIRKINPAGWVQIK--QSYPVMTRISRSDIEVDCNFTTVCG----SELTT 203
Query: 299 MAPFRILSFDIECAGRKGHFP---EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
P I S+DIE ++ FP PT D V Q+A GE++P+ R V+ K +
Sbjct: 204 PPPLVIASWDIETYSKERKFPLSSNPT-DYVTQIATSFQRYGEEEPYRRVVVCFKDTGKV 262
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY-------LIEKEDVHHSI 408
GV+++S E+D++ AW + E DV+IGYN+ ++D Y L++ ++
Sbjct: 263 DGVEIVSCSEEQDMINAWMTIVSEEKTDVLIGYNVFQYDWKYVSGRAQMLVDDASADDTV 322
Query: 409 ISD-----LQNGNAETRRRLA 424
D L+ G A R LA
Sbjct: 323 FVDTLGRLLEGGGAVVERELA 343
>gi|448928135|gb|AGE51706.1| DNA polymerase [Paramecium bursaria Chlorella virus CVM-1]
Length = 907
Score = 295 bits (756), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 293/513 (57%), Gaps = 27/513 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G E R +A Y +D LP +LL KL + EMA VP+
Sbjct: 362 QKDDLPAMQIFEKFEGGPEDRAVIAKYAAQDTLLPLKLLSKLAIFEDITEMANAVKVPVD 421
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ N IP+ K A + +G +EGATVLE + G Y PIA LD
Sbjct: 422 WIGFRGQQVRAFSCLFGKAREMNYAIPDDK-AWAAEGKFEGATVLEPKKGAYFTPIAALD 480
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ TLV DAR NLP + +G TF S +G++P +L+
Sbjct: 481 FASLYPSIIRAHNMSPETLVM--DARYKNLPGVEYYEIGTGIGTFRYSQQSQGVVPALLD 538
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + A D ++A+ D Q + K+ NSVYGF GA+ G LPC+ I++
Sbjct: 539 DLAKFRKNAKKLMAAAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFLPCVPIAA 598
Query: 636 SVTSYGRQMIE-HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR- 693
SVT+ GR MI+ +++ +E +EVIYGDTDS+MV+ +P + +
Sbjct: 599 SVTATGRNMIDVASRRAIE--------LLPGSEVIYGDTDSIMVKMKLPEGKNQEDINDH 650
Query: 694 -EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
E A +++G K P LEFEK+YYPY+L SKKRYA + + +PE+ K+D KG+ V
Sbjct: 651 FEVAKWLAGEITKEYRAPNDLEFEKIYYPYILYSKKRYAAIKYEDPEEKGKVDVKGLALV 710
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRD + + ++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 711 RRDFSPITREILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGY 769
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII--KAAKGAKAYERSEDPIYVLENNI 866
E++ H+ +A ++ R P+ G RVP+V + K AK R+EDP Y ++N +
Sbjct: 770 KNEMQ-PHLIVANKIFDRTGFPVPS-GARVPFVYVEDKDNIDAKQSMRAEDPKYAMDNGL 827
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+ +Q+ KPL +FEP++ + KEL
Sbjct: 828 IVDRLFYINHQLLKPLTSLFEPLVDHPEKELFG 860
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 44/321 (13%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I +FG T +G + C ++ F P F + P P F I E ++ A ++ +P
Sbjct: 22 INLFGKTPDGKTACIRIR-FTPVFLLELPAAWSPSRQKLF--ITETAIKYGAIKDMCLP- 77
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V+KRS+ + + + A PT+ + G++ D + YE
Sbjct: 78 -------VKKRSMWGFDGGVMRNLAQF--AFPTLEKMRKA--KYGLKRD------YQIYE 120
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SNV +R I W+++ + +S +E DC ++ + E +
Sbjct: 121 SNVDPIVRLFHIRKINPAGWVQIK--QSYPVMTRISRSDIEVDCNFTTVSG----SELTT 174
Query: 299 MAPFRILSFDIECAGRKGHFP---EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
P I S+DIE ++ FP PT D V Q+A GE++P+ R V+ K +
Sbjct: 175 PPPLVIASWDIETYSKERKFPLSSNPT-DYVTQIATSFQRYGEEEPYRRVVVCFKDTGKV 233
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY-------LIEKEDVHHSI 408
GV+++S E+D++ AW + E DV+IGYN+ ++D Y L++ ++
Sbjct: 234 DGVEIVSCSEEQDMINAWMTIVSEEKTDVLIGYNVFQYDWKYVSGRAQMLVDDTSADDTV 293
Query: 409 ISD-----LQNGNAETRRRLA 424
D L+ G A R LA
Sbjct: 294 FVDTLGRLLEGGGAVVERELA 314
>gi|448927470|gb|AGE51043.1| DNA polymerase [Paramecium bursaria Chlorella virus CVG-1]
Length = 907
Score = 295 bits (756), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 293/513 (57%), Gaps = 27/513 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G E R +A Y +D LP +LL KL + EMA VP+
Sbjct: 362 QKDDLPAMQIFEKFEGGPEDRAVIAKYAAQDTLLPLKLLSKLAIFEDITEMANAVKVPVD 421
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ N IP+ K A + +G +EGATVLE + G Y PIA LD
Sbjct: 422 WIGFRGQQVRAFSCLFGKAREMNYAIPDDK-AWAAEGKFEGATVLEPKKGAYFTPIAALD 480
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ TLV DAR NLP + +G TF S +G++P +L+
Sbjct: 481 FASLYPSIIRAHNMSPETLVM--DARYKNLPGVEYYEIGTGIGTFRYSQQSQGVVPALLD 538
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + A D ++A+ D Q + K+ NSVYGF GA+ G LPC+ I++
Sbjct: 539 DLAKFRKNAKKLMAAAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFLPCVPIAA 598
Query: 636 SVTSYGRQMIE-HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR- 693
SVT+ GR MI+ +++ +E +EVIYGDTDS+MV+ +P + +
Sbjct: 599 SVTATGRNMIDVASRRAIE--------LLPGSEVIYGDTDSIMVKMKLPEGKNQEDINDH 650
Query: 694 -EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
E A +++G K P LEFEK+YYPY+L SKKRYA + + +PE+ K+D KG+ V
Sbjct: 651 FEVAKWLAGEITKEYRAPNDLEFEKIYYPYILYSKKRYAAIKYEDPEEKGKVDVKGLALV 710
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRD + + ++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 711 RRDFSPITREILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGY 769
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII--KAAKGAKAYERSEDPIYVLENNI 866
E++ H+ +A ++ R P+ G RVP+V + K AK R+EDP Y ++N +
Sbjct: 770 KNEMQ-PHLIVANKIFDRTGFPVPS-GARVPFVYVEDKDNIDAKQSMRAEDPKYAMDNGL 827
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+ +Q+ KPL +FEP++ + KEL
Sbjct: 828 IVDRLFYINHQLLKPLTSLFEPLVDHPEKELFG 860
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 44/321 (13%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I +FG T +G + C ++ F P F + P P F I E ++ A ++ +P
Sbjct: 22 INLFGKTPDGKTACIRIR-FTPVFLLELPAAWSPSRQKLF--ITETAIKYGAIKDMCLP- 77
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V+K+S+ + + + A PT+ + G++ D + YE
Sbjct: 78 -------VKKKSMWGFDGGVMRNLAQF--AFPTLEKMRKA--KYGLKRD------YQIYE 120
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SNV +R I W+++ + +S +E DC ++ + E +
Sbjct: 121 SNVDPIVRLFHIRKINPAGWVQIK--QSYPVMTRISRSDIEVDCNFTTVSG----SELTT 174
Query: 299 MAPFRILSFDIECAGRKGHFP---EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
P I S+DIE ++ FP PT D V Q+A GE++P+ R V+ K +
Sbjct: 175 PPPLVIASWDIETYSKERKFPLSSNPT-DYVTQIATSFQRYGEEEPYRRVVVCFKDTGKV 233
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY-------LIEKEDVHHSI 408
GV+++S E+D++ AW + E DV+IGYN+ ++D Y L++ ++
Sbjct: 234 DGVEIVSCSEEQDMINAWMTIVSEEKTDVLIGYNVFQYDWKYVSGRAQMLVDDASADDTV 293
Query: 409 ISD-----LQNGNAETRRRLA 424
D L+ G A R LA
Sbjct: 294 FVDTLGRLLEGGGAVVERELA 314
>gi|296484157|tpg|DAA26272.1| TPA: DNA-directed DNA polymerase delta 1-like [Bos taurus]
Length = 3133
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 205/604 (33%), Positives = 308/604 (50%), Gaps = 46/604 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2532 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2591
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2592 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2651
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2652 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKRSMKAYK 2711
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D + +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2712 QDRVLSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2771
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2772 D--TKKWG----ARVVYGDTDSLFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2825
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2826 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2885
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2886 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEYRGSA-SYKPGACVPALELTRKMLTYDRRS 2944
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII A G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2945 EPRVGERVPYVIIYGAPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 3004
Query: 890 LKNASKELLSGDH--------TRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSH 941
++ S H T S G + L C C L +G +CS
Sbjct: 3005 ----GIDVFSWYHELPRIQKATSSSRSELEGRKGTIAQYFTTLHCPVCDDLTQHG-ICSK 3059
Query: 942 CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKD 1001
C+ + + +++ELE RL C+ C G + + C S +CP+ Y+ + ++
Sbjct: 3060 CRSQPQHVAVILNQEIRELERQQERLVKICKNCTGCFDRHIPCVSLNCPVLYKLSRVNRE 3119
Query: 1002 MAEA 1005
+++A
Sbjct: 3120 LSKA 3123
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 10/168 (5%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNS 174
++RIFG T G C +HG PY Y+ G G S+ Q+ R N S
Sbjct: 37 VVRIFGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPS 95
Query: 175 KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
Q V + +V Y +K + F+KI + P MV +L G ++ K +
Sbjct: 96 STAQHVFKVSVVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFY 150
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDC 282
+E+++ + L+ ID N+ G N I + K+RK + L C
Sbjct: 151 QPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFRKARRKSDPLHLTGSC 198
>gi|329663970|ref|NP_001193101.1| DNA polymerase zeta catalytic subunit [Bos taurus]
Length = 3133
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 205/604 (33%), Positives = 308/604 (50%), Gaps = 46/604 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2532 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2591
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2592 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2651
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2652 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKRSMKAYK 2711
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D + +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2712 QDRVLSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2771
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2772 D--TKKWG----ARVVYGDTDSLFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2825
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2826 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2885
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2886 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEYRGSA-SYKPGACVPALELTRKMLTYDRRS 2944
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII A G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2945 EPRVGERVPYVIIYGAPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 3004
Query: 890 LKNASKELLSGDH--------TRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSH 941
++ S H T S G + L C C L +G +CS
Sbjct: 3005 ----GIDVFSWYHELPRIQKATSSSRSELEGRKGTIAQYFTTLHCPVCDDLTQHG-ICSK 3059
Query: 942 CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKD 1001
C+ + + +++ELE RL C+ C G + + C S +CP+ Y+ + ++
Sbjct: 3060 CRSQPQHVAVILNQEIRELERQQERLVKICKNCTGCFDRHIPCVSLNCPVLYKLSRVNRE 3119
Query: 1002 MAEA 1005
+++A
Sbjct: 3120 LSKA 3123
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 10/168 (5%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNS 174
++RIFG T G C +HG PY Y+ G G S+ Q+ R N S
Sbjct: 37 VVRIFGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPS 95
Query: 175 KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
Q V + +V Y +K + F+KI + P MV +L G ++ K +
Sbjct: 96 STAQHVFKVSVVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFY 150
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDC 282
+E+++ + L+ ID N+ G N I + K+RK + L C
Sbjct: 151 QPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFRKARRKSDPLHLTGSC 198
>gi|440910569|gb|ELR60356.1| DNA polymerase zeta catalytic subunit, partial [Bos grunniens mutus]
Length = 3093
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 205/604 (33%), Positives = 308/604 (50%), Gaps = 46/604 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2492 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2551
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2552 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2611
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2612 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKRSMKAYK 2671
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D + +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2672 QDRVLSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2731
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2732 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2785
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2786 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2845
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2846 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEYRGSA-SYKPGACVPALELTRKMLTYDRRS 2904
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII A G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2905 EPRVGERVPYVIIYGAPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 2964
Query: 890 LKNASKELLSGDH--------TRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSH 941
++ S H T S G + L C C L +G +CS
Sbjct: 2965 ----GIDVFSWYHELPRIQKATSSSRSELEGRKGTIAQYFTTLHCPVCDDLTQHG-ICSK 3019
Query: 942 CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKD 1001
C+ + + +++ELE RL C+ C G + + C S +CP+ Y+ + ++
Sbjct: 3020 CRSQPQHVAVILNQEIRELERQQERLVKICKNCTGCFDRHIPCVSLNCPVLYKLSRVNRE 3079
Query: 1002 MAEA 1005
+++A
Sbjct: 3080 LSKA 3083
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQFVRHIE 184
G C +HG PY Y+ G G S+ Q+ R N S Q V +
Sbjct: 1 GQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVS 59
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFA 244
+V Y +K + F+KI + P MV +L G ++ K + +E+++ +
Sbjct: 60 LVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHEAHIPYL 114
Query: 245 LRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLY 284
L+ ID N+ G N I + K+RK A+ S D L+
Sbjct: 115 LQLFIDYNLYGMNLINLAAVKFRK-ARRKSKVNFTSDPLH 153
>gi|448934314|gb|AGE57867.1| DNA polymerase [Paramecium bursaria Chlorella virus NW665.2]
Length = 907
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 195/513 (38%), Positives = 293/513 (57%), Gaps = 27/513 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G E R +A Y +D LP +LL KL + EMA VP+
Sbjct: 362 QKDDLPAMQIFEKFEGGPEDRAVIAKYAAQDTLLPLKLLSKLAIFEDITEMANAVKVPVD 421
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ N IP+ K A + +G +EGATVLE + G Y PIA LD
Sbjct: 422 WIGFRGQQVRAFSCLFGKAREMNYAIPDDK-AWAAEGKFEGATVLEPKKGAYFTPIAALD 480
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ TLV DAR N+P + +G TF S +G++P +L+
Sbjct: 481 FASLYPSIIRAHNMSPETLVM--DARYKNIPGVEYYEIGTGIGTFRYSQQSQGVVPALLD 538
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + A D ++A+ D Q + K+ NSVYGF GA+ G LPC+ I++
Sbjct: 539 DLAKFRKNAKKLMAAAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFLPCVPIAA 598
Query: 636 SVTSYGRQMIE-HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR- 693
SVT+ GR MI+ +++ +E +EVIYGDTDS+MV+ +P + +
Sbjct: 599 SVTATGRNMIDVASRRAIE--------LLPGSEVIYGDTDSIMVKMKLPEGKNQEDINDH 650
Query: 694 -EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
E A +++G K P LEFEK+YYPY+L SKKRYA + + +PE+ K+D KG+ V
Sbjct: 651 FEVAKWLAGEITKEYRAPNDLEFEKIYYPYILYSKKRYAAIKYEDPEEKGKVDVKGLALV 710
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRD + + ++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 711 RRDFSPITREILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGY 769
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII--KAAKGAKAYERSEDPIYVLENNI 866
E++ H+ +A ++ R P+ G RVP+V + K AK R+EDP Y ++N +
Sbjct: 770 KNEMQ-PHLIVANKIFDRTGFPVPS-GARVPFVYVEDKDNIDAKQSMRAEDPKYAMDNGL 827
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+ +Q+ KPL +FEP++ + KEL
Sbjct: 828 IVDRLFYINHQLLKPLTSLFEPLVDHPEKELFG 860
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 44/321 (13%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I +FG T +G + C ++ F P F + P P F I E ++ A ++ +P
Sbjct: 22 INLFGKTPDGKTACIRIR-FTPVFLLELPAAWSPSRQKLF--ITETAIKYGAIKDMCLP- 77
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V+KRS+ + + + A PT+ + G++ D + YE
Sbjct: 78 -------VKKRSMWGFDGGVMRNLAQF--AFPTLEKMRKA--KYGLKRD------YQIYE 120
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SNV +R I W+++ + +S +E DC ++ + E +
Sbjct: 121 SNVDPIVRLFHIRKINPAGWVQIK--QSYPVMTRISRSDIEVDCNFTTVSG----SELTT 174
Query: 299 MAPFRILSFDIECAGRKGHFP---EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
P I S+DIE ++ FP PT D V Q+A GE++P+ R V+ K +
Sbjct: 175 PPPLVIASWDIETYSKERKFPLSSNPT-DYVTQIATSFQRYGEEEPYRRVVVCFKDTGKV 233
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY-------LIEKEDVHHSI 408
GV+++S E+D++ AW + E DV+IGYN+ ++D Y L++ ++
Sbjct: 234 EGVEIVSCSEEQDMINAWMTIVSEEKTDVLIGYNVFQYDWKYVSGRAQMLVDDASADDTV 293
Query: 409 ISD-----LQNGNAETRRRLA 424
D L+ G A R LA
Sbjct: 294 FVDTLGRLLEGGGAVVERELA 314
>gi|8810234|gb|AAF80108.1|AF268040_1 DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 261/913 (28%), Positives = 420/913 (46%), Gaps = 153/913 (16%)
Query: 97 DIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI 156
DI+Y+ + ++P + +IR+FG T G +C V G Y Y P
Sbjct: 97 DIEYLPYNYRHHVIP----TGTVIRLFGKTVNGVKICVNVFGQLSYIYCEVPSE------ 146
Query: 157 SHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC 216
++ H +++ M E N+N V + MY + KI T +
Sbjct: 147 TYLHGVMKKYMYENNKNFTFST------AVDNKFSMYGFNRSPVTVYKITF---TDYFAA 197
Query: 217 RGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV---PVGKYRKTAKTL 273
R + G L+ +K YE++V RF ID + W V + +Y+ + ++L
Sbjct: 198 REV---GRMLEAQKIK---VYETSVDVLSRFYIDNDYPSFGWYTVQKYSINEYKFSNQSL 251
Query: 274 -------SYCQL------EFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH--- 317
C L E+DCL DI G F + + I K
Sbjct: 252 EISCSVKDLCPLDEDIWPEYDCLTFDIECMSESGGFPNASVQSDIVIQISAVLHKTGSDN 311
Query: 318 -----FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP--IVGVDVMSFETERDVL 370
F T DP I A++ E + ++ +K +P I G ++++F+ ++
Sbjct: 312 MDVHLFTLGTCDP-IDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLII 370
Query: 371 LAWR-------DFIR--------EVDPDVMIGYN-----------ICKFDLPYLI----- 399
A + +F + + D G+N IC P +
Sbjct: 371 RATKLYRLGVGEFTKLKKGLLCIKSTNDFKQGFNCIKTKVYASGMICIDFYPVCVGKITS 430
Query: 400 ---------------EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFI 444
KED+ + I + R ++ YC++D+ + + L K +
Sbjct: 431 DNYKLDTIANLCLGKHKEDMPYKRIPIEFISGSGGRCKVGRYCIQDSVIVKELFCKFNYH 490
Query: 445 FNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG---TYEGA 501
++++ +PI +++ GQ +V + +L + +++N++IP+ K A E G +Y GA
Sbjct: 491 MEASAISKLAYLPIRKVINDGQQRRVFTCILHETRKRNMLIPD-KIAPRETGEDESYRGA 549
Query: 502 TVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV-TPEDARKLN---LPPECVNKT 557
TVL+ G+Y P+ +DFASLYPSIM+A NLCYSTL+ ED ++ + VNK
Sbjct: 550 TVLDPHVGYYASPVIVMDFASLYPSIMIANNLCYSTLILNDEDVTGIDEKDILTVHVNKN 609
Query: 558 PSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSV 617
+ FV+S +++ IL +L L RK KA +K +DP+ +LD +QLALK++ N+
Sbjct: 610 -TVYRFVRSGVRESILGTLLSRWLRKRKEVKARMKRCEDPMLALILDKQQLALKVTCNAF 668
Query: 618 YGFTGATVGQLPCIEISSSVTSYGRQMIEHT----------KKLVEDKFTTVGG---YEH 664
YGFTGA G LPC+ +++S+TS GR M+ T ++ V +KF G +
Sbjct: 669 YGFTGAVHGLLPCLPLAASITSIGRDMLRQTSDFINNVLSSREYVSEKFGLSDGDFQGDF 728
Query: 665 NAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISK 723
+ VIYGDTDSV V E + + + ++S FI+PIKLEFEK++ P +LI K
Sbjct: 729 SLNVIYGDTDSVFVCVKNIVPERLAGICADISAHVSSQLFIEPIKLEFEKMFLPLMLICK 788
Query: 724 KRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKST 783
KRY G + + D++ KG+E VR+ +C VKN+V E + + D ++ A +
Sbjct: 789 KRYVGKMFDS----DELVMKGVELVRKTSCPFVKNIVKEIVRLLFWDSEVARAAVELSQM 844
Query: 784 ISD------------------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVE 818
D L N++D++ LV++ L+K Y + H+
Sbjct: 845 SCDEVIRNGLPAGIHKIIDIIIGARDRLYTNKVDVNELVLSTMLSKEISMYKQPNLPHLR 904
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAA-KGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
+ ER+R R+ P VGDRV YV+I + K YE SEDP+YV+ENNIPI+ Y E Q
Sbjct: 905 VIERLRNRNEE-VPVVGDRVSYVLISSMDKNVANYELSEDPLYVIENNIPINAERYFE-Q 962
Query: 878 ISKPLLRIFEPIL 890
+ K + I PI+
Sbjct: 963 LVKAVSNIICPII 975
>gi|448926792|gb|AGE50367.1| DNA polymerase [Paramecium bursaria Chlorella virus CVA-1]
gi|448928473|gb|AGE52043.1| DNA polymerase [Paramecium bursaria Chlorella virus CVR-1]
Length = 907
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 195/513 (38%), Positives = 293/513 (57%), Gaps = 27/513 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G E R +A Y +D LP +LL KL + EMA VP+
Sbjct: 362 QKDDLPAMQIFEKFEGGPEDRAVIAKYAAQDTLLPLKLLSKLAIFEDITEMANAVKVPVD 421
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ N IP+ K A + +G +EGATVLE + G Y PIA LD
Sbjct: 422 WIGFRGQQVRAFSCLFGKAREMNYAIPDDK-AWAAEGKFEGATVLEPKKGAYFTPIAALD 480
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ TLV DAR N+P + +G TF S +G++P +L+
Sbjct: 481 FASLYPSIIRAHNMSPETLVM--DARYKNIPGVEYYEIGTGIGTFRYSQQSQGVVPALLD 538
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + A D ++A+ D Q + K+ NSVYGF GA+ G LPC+ I++
Sbjct: 539 DLAKFRKNAKKLMAAAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFLPCVPIAA 598
Query: 636 SVTSYGRQMIE-HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR- 693
SVT+ GR MI+ +++ +E +EVIYGDTDS+MV+ +P + +
Sbjct: 599 SVTATGRNMIDVASRRAIE--------LLPGSEVIYGDTDSIMVKMKLPEGKNQEDINDH 650
Query: 694 -EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
E A +++G K P LEFEK+YYPY+L SKKRYA + + +PE+ K+D KG+ V
Sbjct: 651 FEVAKWLAGEITKEYRAPNDLEFEKIYYPYILYSKKRYAAIKYEDPEEKGKVDVKGLALV 710
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRD + + ++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 711 RRDFSPITREILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGY 769
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII--KAAKGAKAYERSEDPIYVLENNI 866
E++ H+ +A ++ R P+ G RVP+V + K AK R+EDP Y ++N +
Sbjct: 770 KNEMQ-PHLIVANKIFDRTGFPVPS-GARVPFVYVEDKDNIDAKQSMRAEDPKYAMDNGL 827
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+ +Q+ KPL +FEP++ + KEL
Sbjct: 828 IVDRLFYINHQLLKPLTSLFEPLVDHPEKELFG 860
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 44/321 (13%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I +FG T +G + C ++ F P F + P P F I E ++ A ++ +P
Sbjct: 22 INLFGKTPDGKTACIRIR-FTPVFLLELPAAWSPSRQKLF--ITETAIKYGAIKDMCLP- 77
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V+K+S+ + + + A PT+ + G++ D + YE
Sbjct: 78 -------VKKKSMWGFDGGVMRNLAQF--AFPTLEKMRKA--KYGLKRD------YQIYE 120
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SNV +R I W+++ + +S +E DC ++ + E +
Sbjct: 121 SNVDPIVRLFHIRKINPAGWVQIK--QSYPVMTRISRSDIEVDCNFTTVSG----SELTT 174
Query: 299 MAPFRILSFDIECAGRKGHFP---EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
P I S+DIE ++ FP PT D V Q+A GE++P+ R V+ K +
Sbjct: 175 PPPLVIASWDIETYSKERKFPLSSNPT-DYVTQIATSFQRYGEEEPYRRVVVCFKDTGKV 233
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY-------LIEKEDVHHSI 408
GV+++S E+D++ AW + E DV+IGYN+ ++D Y L++ ++
Sbjct: 234 DGVEIVSCSEEQDMINAWMTIVSEEKTDVLIGYNVFQYDWKYVSGRAQMLVDDASADDTV 293
Query: 409 ISD-----LQNGNAETRRRLA 424
D L+ G A R LA
Sbjct: 294 FVDTLGRLLEGGGAVVERELA 314
>gi|448926115|gb|AGE49692.1| DNA polymerase [Paramecium bursaria Chlorella virus Can18-4]
Length = 939
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 195/513 (38%), Positives = 293/513 (57%), Gaps = 27/513 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G + R +A Y +D LP +LL KL + EMA VP+
Sbjct: 394 QKDDLPAMKIFEKFEGGPDDRAVIAKYAAQDTLLPLKLLSKLAIFEDITEMANAVKVPVD 453
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ N IP+ K A + +G +EGATVLE + G Y PIA LD
Sbjct: 454 WIGFRGQQVRAFSCLFGKAREMNYAIPDDK-AWAAEGKFEGATVLEPKKGAYFTPIAALD 512
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ TLV DAR NLP + +G TF S +G++P +L+
Sbjct: 513 FASLYPSIIRAHNMSPETLVM--DARYKNLPGVEYYEIGTGIGTFRYSQQSQGVVPALLD 570
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + A D ++A+ D Q + K+ NSVYGF GA+ G LPC+ I++
Sbjct: 571 DLAKFRKNAKKLMAAAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFLPCVPIAA 630
Query: 636 SVTSYGRQMIE-HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR- 693
SVT+ GR MI+ +++ +E +EVIYGDTDS+MV+ +P + +
Sbjct: 631 SVTATGRNMIDVASRRAIE--------LLPGSEVIYGDTDSIMVKMKLPEGKNQEDINDH 682
Query: 694 -EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
E A +++G K P LEFEK+YYPY+L SKKRYA + + +PE+ K+D KG+ V
Sbjct: 683 FEVAKWLAGEITKEYRAPNDLEFEKIYYPYILYSKKRYAAIKYEDPEEKGKVDVKGLALV 742
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRD + + ++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 743 RRDFSPITREILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGY 801
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII--KAAKGAKAYERSEDPIYVLENNI 866
E++ H+ +A ++ R P+ G RVP+V + K AK R+EDP Y ++N +
Sbjct: 802 KNEMQ-PHLIVANKIFDRTGFPVPS-GARVPFVYVEDKDNIDAKQSMRAEDPKYAMDNGL 859
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+ +Q+ KPL +FEP++ + KEL
Sbjct: 860 IVDRLFYINHQLLKPLTSLFEPLVDHPEKELFG 892
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 44/321 (13%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I +FG T +G + C ++ F P F + P P F I E ++ A ++ +P
Sbjct: 54 INLFGKTPDGKTACIRIR-FTPVFLLELPAAWSPSRQKLF--ITETAIKYGAIKDMCLP- 109
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V+KRS+ + + + A PT+ + G++ D + YE
Sbjct: 110 -------VKKRSMWGFDGGVMRNLAQF--AFPTLEKMRKA--KYGLKRD------YQIYE 152
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
SNV +R I W+++ + +S +E DC ++ + E +
Sbjct: 153 SNVDPIVRLFHIRKINPAGWVQIK--QSYPVMTRISRSDIEVDCNFTTVSG----SELTT 206
Query: 299 MAPFRILSFDIECAGRKGHFP---EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
P I S+DIE ++ FP PT D V Q+A GE++P+ R V+ K +
Sbjct: 207 PPPLVIASWDIETYSKERKFPLSSNPT-DYVTQIATSFQRYGEEEPYRRVVVCFKDTGKV 265
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY-------LIEKEDVHHSI 408
GV+++S E+D++ AW + E DV+IGYN+ ++D Y L++ ++
Sbjct: 266 DGVEIVSCSEEQDMINAWMTIVSEEKTDVLIGYNVFQYDWKYVSGRAQMLVDDASADDTV 325
Query: 409 ISD-----LQNGNAETRRRLA 424
D L+ G A R LA
Sbjct: 326 FVDTLGRLLEGGGAVVERELA 346
>gi|426234529|ref|XP_004011248.1| PREDICTED: DNA polymerase zeta catalytic subunit [Ovis aries]
Length = 3056
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 205/604 (33%), Positives = 307/604 (50%), Gaps = 46/604 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2455 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2514
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2515 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2574
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2575 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKRSMKAYK 2634
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2635 QDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2694
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2695 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2748
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2749 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2808
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2809 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEYRGSA-SYKPGACVPALELTRKMLTYDRRS 2867
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII A G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2868 EPRVGERVPYVIIYGAPGVPLIQLVRRPVEVLQDPTVRLNATYYITKQILPPLARIFSLI 2927
Query: 890 LKNASKELLSGDH--------TRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSH 941
++ S H T S G + L C C L +G +CS
Sbjct: 2928 ----GIDVFSWYHELPRIQKATSSSRSELEGRKGTIAQYFTTLHCPVCDDLTQHG-ICSK 2982
Query: 942 CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKD 1001
C+ + + +++ELE RL C+ C G + + C S +CP+ Y+ + ++
Sbjct: 2983 CRSQPQHVAVILNQEIRELERQQERLVKICKNCTGCFDRHIPCVSLNCPVLYKLSRVNRE 3042
Query: 1002 MAEA 1005
+++A
Sbjct: 3043 LSKA 3046
>gi|8810236|gb|AAF80109.1|AF268041_1 DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 260/914 (28%), Positives = 420/914 (45%), Gaps = 155/914 (16%)
Query: 97 DIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI 156
DI+Y+ + ++P + +IR+FG T G +C V G Y Y P
Sbjct: 97 DIEYLPYNYRHHVIP----TGTVIRLFGKTVNGVKICVNVFGQLSYIYCEVPSE------ 146
Query: 157 SHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC 216
++ H +++ M E N+N V + MY + KI T +
Sbjct: 147 TYLHDVMKKYMYENNKNFTFST------AVDNKFSMYGFNRSPVTVYKITF---TDYFAA 197
Query: 217 RGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV---PVGKYRKTAKTL 273
R + G L+ +K YE++V RF ID + W V + +Y+ + ++L
Sbjct: 198 REV---GRMLEAQKIK---VYETSVDVLSRFYIDNDYPSFGWYTVQKYSINEYKFSNQSL 251
Query: 274 -------SYCQL------EFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH--- 317
C L E+DCL DI G F + + I K
Sbjct: 252 EISCSVKDLCPLDEDIWPEYDCLTFDIECMSESGGFPNASVQSDIVIQISAVLHKTGSDN 311
Query: 318 -----FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP--IVGVDVMSFETERDVL 370
F T DP I A++ E + ++ +K +P I G ++++F+ ++
Sbjct: 312 MDVHLFTLGTCDP-IDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLII 370
Query: 371 LAWRDF----------------IREVDPDVMIGYN-----------ICKFDLPYLI---- 399
A + + I+ + D G+N IC P +
Sbjct: 371 RATKLYRLGVGEFTKLKKGLLCIKSTN-DFKQGFNCIKTKVYASGMICIDFYPVCVGKIT 429
Query: 400 ----------------EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMF 443
KED+ + I + R ++ YC++D+ + + L K +
Sbjct: 430 SDNYKLDTIANLCLGKHKEDMPYKRIPIEFISGSGGRCKVGRYCIQDSVIVKELFCKFNY 489
Query: 444 IFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG---TYEG 500
++++ +PI +++ GQ +V + +L + +++N++IP+ K A E G +Y G
Sbjct: 490 HMEASAISKLAYLPIRKVINDGQQRRVFTCILHETRKRNMLIPD-KIAPRETGEDESYRG 548
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV-TPEDARKLN---LPPECVNK 556
ATVL+ G+Y P+ +DFASLYPSIM+A NLCYSTL+ ED ++ + VNK
Sbjct: 549 ATVLDPHVGYYASPVIVMDFASLYPSIMIANNLCYSTLILNDEDVTGIDEKDILTVHVNK 608
Query: 557 TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANS 616
+ FV+S +++ +L +L L RK KA +K +DP+ +LD +QLALK++ N+
Sbjct: 609 N-TVYRFVRSGVRESMLGTLLSRWLRKRKEVKARMKRCEDPMLALILDKQQLALKVTCNA 667
Query: 617 VYGFTGATVGQLPCIEISSSVTSYGRQMIEHT----------KKLVEDKFTTVGG---YE 663
YGFTGA G LPC+ +++S+TS GR M+ T ++ V +KF G +
Sbjct: 668 FYGFTGAVHGLLPCLPLAASITSIGRDMLRQTSDFINNVLSSREYVSEKFGLSDGDFQGD 727
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLIS 722
+ VIYGDTDSV V E + + + ++S FI+PIKLEFEK++ P +LI
Sbjct: 728 FSLNVIYGDTDSVFVCVKNIVPERLAGICADISAHVSSQLFIEPIKLEFEKMFLPLMLIC 787
Query: 723 KKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS 782
KKRY G + + D++ KG+E VR+ +C VKN+V E + + D ++ A +
Sbjct: 788 KKRYVGKMFDS----DELVMKGVELVRKTSCPFVKNIVKEIVRLLFWDSEVARAAVELSQ 843
Query: 783 TISD------------------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHV 817
D L N++D++ LV++ L+K Y + H+
Sbjct: 844 MSCDEVIRNGLPAGIHKIIDIIIGARDRLYTNKVDVNELVLSTMLSKEISMYKQPNLPHL 903
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAA-KGAKAYERSEDPIYVLENNIPIDTHYYLEN 876
+ ER+R R+ P VGDRV YV+I + K YE SEDP+YV+ENNIPI+ Y E
Sbjct: 904 RVIERLRNRNEE-VPVVGDRVSYVLISSMDKNVANYELSEDPLYVIENNIPINAERYFE- 961
Query: 877 QISKPLLRIFEPIL 890
Q+ K + I PI+
Sbjct: 962 QLVKAVSNIICPII 975
>gi|432102591|gb|ELK30158.1| DNA polymerase delta catalytic subunit [Myotis davidii]
Length = 852
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/224 (63%), Positives = 183/224 (81%), Gaps = 2/224 (0%)
Query: 411 DLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKV 470
D NGN +TRRRLAVYCLKDA+LP RLL++LM + N +EMARVTGVP+ +LL+RGQ +KV
Sbjct: 279 DHYNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTGVPLGYLLTRGQQVKV 338
Query: 471 LSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMA 530
+SQLLR+A ++ L++P VK G E Y GATV+E G+Y+ PI TLDF+SLYPSIMMA
Sbjct: 339 VSQLLRQAMREGLLMPVVKTEGGED--YTGATVIEPLKGYYDVPITTLDFSSLYPSIMMA 396
Query: 531 YNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKAD 590
+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE LL+ARKRAKA+
Sbjct: 397 HNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAE 456
Query: 591 LKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
L + DPL + VLDGRQLALK+SANSVYGFTGA VG+LPC+EIS
Sbjct: 457 LAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEIS 500
Score = 233 bits (593), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 114/182 (62%), Positives = 140/182 (76%), Gaps = 1/182 (0%)
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SVT +GRQMIE TK+LVE K+T GY +A+V+YGDTDSVM +FGV +V AM LGREA
Sbjct: 623 SVTGFGRQMIEKTKQLVESKYTVENGYSASAKVVYGDTDSVMCRFGVSSVAEAMALGREA 682
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCL 754
AD++SG F PI+LEFEKVY+PYLLISKKRYAGL +++ P+ D+MD KG+E VRRDNC
Sbjct: 683 ADWVSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDTHDRMDCKGLEAVRRDNCP 742
Query: 755 LVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA 814
LV NLVT L ++L+DRD GAV + + ISDLL NR+D+S LVITK LT+ DY K
Sbjct: 743 LVANLVTASLRRLLIDRDPEGAVSHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQ 802
Query: 815 AH 816
AH
Sbjct: 803 AH 804
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 138/196 (70%), Gaps = 3/196 (1%)
Query: 223 GIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY--RKTAKTLSYCQLEF 280
G+++ GLG SF +YE+NV F +RFM+D +IVG NW+E+P GKY R K + CQLE
Sbjct: 14 GVRVAGLGTPSFASYEANVDFEIRFMVDADIVGCNWLELPAGKYVLRPEGKA-TLCQLEA 72
Query: 281 DCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQ 340
D L+SD++S PEG++ ++AP R+LSFDIECAGRKG FPEP DPVIQ+ +L GE +
Sbjct: 73 DVLWSDVVSHPPEGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPE 132
Query: 341 PFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIE 400
PF+R +TL+ CAPI+G V S+E E ++L AW FIR +DPDV+ GYNI FDLPYLI
Sbjct: 133 PFLRLALTLRPCAPILGAQVQSYEREEELLQAWSTFIRTIDPDVITGYNIQNFDLPYLIS 192
Query: 401 KEDVHHSIISDLQNGN 416
+ + + +G+
Sbjct: 193 RAQHLKKSVEKISSGH 208
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 970 QCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWN 1013
Q CQGSLH+DV+CTSRDCPIFY RKK +KD+ + + L R+
Sbjct: 802 QAHRCQGSLHEDVICTSRDCPIFYMRKKVRKDLEDQEQLLRRFG 845
>gi|350578361|ref|XP_003480350.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Sus scrofa]
Length = 721
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 201/599 (33%), Positives = 308/599 (51%), Gaps = 38/599 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 122 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 181
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 182 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKHDEFKF 241
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 242 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 301
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 302 QDRALSRMLEARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 361
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 362 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 415
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 416 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 475
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 476 ISLIKQYVQRQCLKLLEGKASIQDFIFAKEYRGSA-SYKPGACVPALELTRKMLTHDRRS 534
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ V+++ + ++ YY+ QI PL RIF I
Sbjct: 535 EPRVGERVPYVIIYGTPGVPLIQLVRRPVEVMQDPTLRLNATYYITKQILPPLARIFSLI 594
Query: 890 ---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGRE 946
+ N EL + S S I ++ L C C L +G +C+ C+ +
Sbjct: 595 GIDVFNWYHELPRKATSSSRSEHEGRKGTISQYFT-TLHCPVCDDLTQHG-ICTKCRSQP 652
Query: 947 AELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ Y+ + +++++A
Sbjct: 653 QHVAVILNQEIRELERQQEQLVKICRNCTGCFDRHIPCVSLNCPVLYKLSRVNRELSKA 711
>gi|73669283|ref|YP_305298.1| replicative DNA polymerase I [Methanosarcina barkeri str. Fusaro]
gi|72396445|gb|AAZ70718.1| replicative DNA polymerase I [Methanosarcina barkeri str. Fusaro]
Length = 932
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 271/912 (29%), Positives = 421/912 (46%), Gaps = 165/912 (18%)
Query: 93 FQQLDIDY-VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGM 151
FQ LD DY VI DS + +IR+FG +G SVCC V FEPYFY+
Sbjct: 5 FQILDADYEVINDS-----------SPVIRLFGRGVDGKSVCCFVPDFEPYFYLKAS--- 50
Query: 152 GPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPT 211
D++ +++E + V+ +E+V+K + YQ+ K + L++ LP
Sbjct: 51 --GDLNAVARLIEETFTQ----------VKKVEIVEKFEPIGYQKTKIK-MLRVTTHLPR 97
Query: 212 MVASCRG-ILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIE-----VPVGK 265
V R IL L G + YE+++LF RF+ID ++ G W+ V K
Sbjct: 98 EVPEIRDEILKLQEVLKAEG--KWEVYETDILFRNRFLIDKDLGGMVWVSAEGEAVDPAK 155
Query: 266 YRKTAKT-----------------------------LSYCQLEFDCLYSDIISRHPEGEF 296
Y +T + L Y + +CL D PE
Sbjct: 156 YLRTNGSGSSRCGKFTCDASILASGLNKVENLTLAPLKYLAFDIECLPLDGGMPSPE--- 212
Query: 297 SKMAPFRILSFDIECAGRKGH-----FPEPT--------------------------HDP 325
++P ++SF E KGH +P +DP
Sbjct: 213 --VSPIIMISFSFEPE-YKGHKTLVLLAKPVENLNSDVWSYTDETEMLNKFFEIFCDYDP 269
Query: 326 VIQVANLVTLQGEKQPFIRN-VMTL----KSCAPIVGVDVMSFETERDVLLAWRDF---- 376
I + Q P+I + V TL S P+VG D + L+ +
Sbjct: 270 DIVIG--YNHQDFDIPYITDRVKTLVSEGNSINPVVGRDGSKIGYRKFGLITRTEMKGRV 327
Query: 377 IREVDPDVMIGYNICKFDLPYLI------EKEDVHHSIISDLQNGNAETRRRLAVYCLKD 430
+ + P V +++ ++ L + EK DV + + E ++ Y +D
Sbjct: 328 VVDALPLVRRAFSLKQYTLRAVSKELLSREKLDVPPLEMEEYWLDTGEKFKKFVDYSRRD 387
Query: 431 AYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQ 490
A L L+ L + YV +A+V+G + ++ GQ+ V + LL++ ++ V+
Sbjct: 388 AELALELILNLRLLDKYVALAQVSGSLLQEVVDGGQTSMVETLLLKEFGLRDRVLLPKPD 447
Query: 491 AGSEQGTY------EGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDA 544
G Y +G VLE + G E + LD+ SLYP+IMMA+NLCY+T+VT + +
Sbjct: 448 DGVSAERYAMSSDLKGGEVLEPKKGLLEN-VLILDYKSLYPTIMMAHNLCYTTVVTGDKS 506
Query: 545 RKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLD 604
+ + P PSG FV S + KGI+P ILE+LL R + K ++ + E VLD
Sbjct: 507 DGVTIRP------PSGGEFVPSEVFKGIVPSILEDLLNKRTQTKKRMRGTSNENEYRVLD 560
Query: 605 GRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEH 664
QLALKI NS YG++G +L + ++++VTS+GR I +T++++ + +
Sbjct: 561 ATQLALKILLNSFYGYSGYARARLYSLTLANAVTSFGRSNILNTREIINNTIGKIILRNK 620
Query: 665 NA------------------EVIYGDTDSVMVQ---FGVPTVEAAMKLGREAADYISGTF 703
A V YGDTDSV V G ++E +G A+ +S +
Sbjct: 621 TALLLDEAGELSPQDRVVELSVAYGDTDSVFVHCKSRGDLSLEEVSLIGNRLANIVSVSL 680
Query: 704 IKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKF---DKMDTKGIETVRRDNCLLVKNLV 760
P++LEFE + LLI+KKRYA L++ P+ DK+ KG+ETVRRD C L +
Sbjct: 681 PDPMELEFESIAKRALLIAKKRYA-LWFFEPKNSGWEDKIKVKGMETVRRDWCELTSVTL 739
Query: 761 TECLHKILVDRDIPGAVQYVKSTIS-----DLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
L +L+ D+ AV+YV+ +S D + + LV+T+ LT+ + Y+ K
Sbjct: 740 NRVLELVLIKGDVDQAVEYVRQIVSKVRNLDPAKDSEIIESLVLTRTLTRKIESYKNKQP 799
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
H+ +AE ++KR P++G R+P+VI A KG +R+EDP YV E NIPID YY++
Sbjct: 800 HLTVAENLKKR-TGVVPSIGTRIPFVIT-AGKGL-FVDRAEDPDYVREKNIPIDVDYYIK 856
Query: 876 NQISKPLLRIFE 887
QI P+ RI E
Sbjct: 857 KQILPPVERILE 868
>gi|410928855|ref|XP_003977815.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Takifugu
rubripes]
Length = 2944
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 221/685 (32%), Positives = 334/685 (48%), Gaps = 47/685 (6%)
Query: 357 GVDVMS--FETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVH-HSIISDLQ 413
G D M+ R L WR EV + YN L ++ ++ +SD
Sbjct: 2261 GADTMTEIHIVGRITLNLWRVMKTEV---TLNNYNFENVAFHVLHQRFPLYSQRTLSDWF 2317
Query: 414 NGNAETRRRLAVYC-LKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLS 472
+ N++ R V C + +LL + I E+ARV G+ +L+RG +V S
Sbjct: 2318 DHNSDLFRWKMVDCYISRVQGIMQLLQEQDIIGRTSELARVFGIQFFHVLTRGSQYRVES 2377
Query: 473 QLLRKAKQKNL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMA 530
+LR AK N V P+V+Q ++ V+E + FY + LDF SLYPSI++A
Sbjct: 2378 MMLRVAKPLNYIPVTPSVQQRAHQRAPQCLPLVMEPESRFYSNSVVVLDFQSLYPSIIIA 2437
Query: 531 YNLCYST-------LVTPEDAR----KLNLPPEC-------VNKTPSGETFVKSNLQKGI 572
YN C+ST L TP++ + L +P + + +P+G FVK++++KGI
Sbjct: 2438 YNYCFSTCLGHVDSLGTPDEFKFGCTSLRVPHDLLYQLRNDITVSPNGIAFVKASVRKGI 2497
Query: 573 LPEILEELLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPC 630
LP +LEE+L R K +K K D +LD RQL LK+ AN +G+T A G++P
Sbjct: 2498 LPSMLEEILNTRIMVKQSMKMYKQDKTLMRLLDARQLGLKLIANVTFGYTAANYSGRMPS 2557
Query: 631 IEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMK 690
+E+ S+ R+ +E KLV D TT G A V+YGDTDS+ V T E A K
Sbjct: 2558 VEVGDSIVHKARETLERAIKLVND--TTKWG----ARVVYGDTDSMFVLLKGATKEQAFK 2611
Query: 691 LGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVR 749
+G E A+ ++ T KP+KL+FEKVY P +L +KKRY G +Y + +K D KGIETVR
Sbjct: 2612 IGLEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYESLDQKEPVFDAKGIETVR 2671
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD+C V ++ + + RDI QYV+ +L R + L K +
Sbjct: 2672 RDSCPAVSKILERSIKLLFETRDISQVKQYVQRQCIKVLDGRASMQDLTFAKEY-RGSSS 2730
Query: 810 YEVKAA--HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NI 866
Y A +EL RM D + P VG+RVPYVI+ G + P+ VL++ +
Sbjct: 2731 YRPGACVPALELTRRMMAHDRRSEPRVGERVPYVIVCGTPGVALIQLVRQPVEVLQDATL 2790
Query: 867 PIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPS------NSGIMKFA 920
++T YYL QI PL R+F+ I + + +S S+ + G +
Sbjct: 2791 RLNTTYYLTKQILPPLGRMFQLIGVDVFSWYKELPKIQKVSCSSVAYWEEGRRKGTISQY 2850
Query: 921 KRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQ 980
L C C L G +CSHC+ + ++++ E + C+ C GS +
Sbjct: 2851 FTTLHCPACDELTQLG-VCSHCRAEPQRVAVTLHQEMRQWESQQELILQICRNCSGSAER 2909
Query: 981 DVLCTSRDCPIFYRRKKAQKDMAEA 1005
V C S DCP+ Y+ + + +++A
Sbjct: 2910 LVPCVSLDCPVLYKLSRVSRQLSKA 2934
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP- 177
++RIFG T G C +HG PY Y+ G + + R N P
Sbjct: 37 VVRIFGATPAGQKTCLHLHGIFPYIYVPY-DGYNQQPERYMRLVAFSIDRALNVTMGNPS 95
Query: 178 QFVRHIEMVQKRSIM--YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
+HI V S M Y K + F+KI + P MV +L G ++ KS+
Sbjct: 96 SSAQHIFKVALVSGMPFYGYHAKEKLFMKIYLYNPQMVKRVCDLLQSGAVMN----KSYQ 151
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+E ++ + L+ ID N+ G N + + K+R+ K
Sbjct: 152 PHEGHIPYLLQLFIDYNLYGMNLLNLAAVKFRRGRK 187
>gi|281427127|ref|NP_001163919.1| REV3-like, polymerase (DNA directed), zeta, catalytic subunit
[Xenopus laevis]
gi|262176857|gb|ACY27483.1| DNA polymerase zeta [Xenopus laevis]
Length = 3139
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 208/625 (33%), Positives = 315/625 (50%), Gaps = 56/625 (8%)
Query: 420 RRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAK 479
R ++A Y + + +LL+KL I E+AR+ G+ +L+RG +V S +LR AK
Sbjct: 2522 RWKMADYYMSRVHGTLQLLEKLDLIGRTSELARLFGIQFLHVLTRGSQYRVESMMLRIAK 2581
Query: 480 QKNLV--IPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST 537
N + P+++Q + V+E + FY I LDF SLYPSI++AYN CYST
Sbjct: 2582 PMNYIPLTPSIQQRSQMRAPQCIPLVMEPESRFYSNCILVLDFQSLYPSIVIAYNYCYST 2641
Query: 538 -------LVTPEDAR----KLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEE 579
L ED + L +PP+ + +P+G FVK+ ++KG+LP +LEE
Sbjct: 2642 CLGNVENLGKYEDFKFGCSSLQVPPDLLYQLRNDITVSPNGVAFVKACVRKGVLPRMLEE 2701
Query: 580 LLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSV 637
+L R K +K K D +LD RQL LK+ AN +G+T A G++PC+EI S+
Sbjct: 2702 ILKTRIMVKQSMKNYKQDKSLTRLLDARQLGLKLIANVTFGYTAANFSGRMPCVEIGDSI 2761
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
R+ +E KLV D T G A+V+YGDTDS+ V T E + K+G+E A+
Sbjct: 2762 IHKARETLERAIKLVND--TKKWG----AKVVYGDTDSMFVLLKGATKEQSFKIGQEIAE 2815
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLV 756
++ T KPIKL+FEKVY P +L +KKRY G +Y T +K D KGIETVRRD C V
Sbjct: 2816 AVTATNPKPIKLKFEKVYLPCVLQTKKRYVGYMYETVDQKDPVFDAKGIETVRRDACPAV 2875
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA- 815
++ L + RDI QYV+ ++ + + L+ K + Y+ A
Sbjct: 2876 GKILERSLKLLFETRDISQIKQYVQRQCIKVVEGKASMQDLIFAKEY-RGSFAYKPGACV 2934
Query: 816 -HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYY 873
+EL +M D + P V +RVPYVII + G + PI VL++ N+ I+ YY
Sbjct: 2935 PALELTRKMVAYDRRSEPRVSERVPYVIIYGSPGVPLIQLVRRPIDVLQDHNLRINGTYY 2994
Query: 874 LENQISKPLLRIFE-------------PILKNASKELLSGDHTRSISISTPSNSGIMKFA 920
+ QI PL RIF P ++ + R +IS +
Sbjct: 2995 ITKQILPPLNRIFSLIGVDVFSWYDELPRIQKTFSTARNEQDARKCTISQYFTT------ 3048
Query: 921 KRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQ 980
L C C L +G +CS C+ + + +++ELE +L C+ C G +Q
Sbjct: 3049 ---LHCPVCDELTQHG-ICSKCRSQPQNVVVILNQEIRELEYKQDQLAKLCRNCTGCSNQ 3104
Query: 981 DVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ C S +CP+ ++ + +++ +A
Sbjct: 3105 QIQCVSLNCPVLFKLSRVSRELCKA 3129
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF-HQILEGRMREANRNSKVP---- 177
FG T G C +HG PY Y G G D + QI R N P
Sbjct: 41 FGATPAGQRACLHLHGIFPYLYTPY-DGYGQQDPERYLRQIAFSIDRALNVALGNPAASS 99
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
Q V I +V Y +++ Q F+KI + P MV +L G ++ K + +
Sbjct: 100 QHVFKITVVSGVPFYGYHEKEIQ-FMKIYLYNPAMVKRVSELLQGGAVMN----KCYQPH 154
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
E++V + L+ ID N+ G N I + K+R+ +
Sbjct: 155 EAHVPYLLQLFIDYNLYGMNLINLAAVKFRRAQR 188
>gi|350578363|ref|XP_003480351.1| PREDICTED: DNA polymerase zeta catalytic subunit [Sus scrofa]
Length = 1024
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 199/599 (33%), Positives = 307/599 (51%), Gaps = 38/599 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 425 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 484
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 485 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKHDEFKF 544
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 545 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 604
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 605 QDRALSRMLEARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 664
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D + A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 665 DT------KKWGARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 718
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 719 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 778
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 779 ISLIKQYVQRQCLKLLEGKASIQDFIFAKEYRGSA-SYKPGACVPALELTRKMLTHDRRS 837
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ V+++ + ++ YY+ QI PL RIF I
Sbjct: 838 EPRVGERVPYVIIYGTPGVPLIQLVRRPVEVMQDPTLRLNATYYITKQILPPLARIFSLI 897
Query: 890 ---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGRE 946
+ N EL + S S I ++ L C C L +G +C+ C+ +
Sbjct: 898 GIDVFNWYHELPRKATSSSRSEHEGRKGTISQYFT-TLHCPVCDDLTQHG-ICTKCRSQP 955
Query: 947 AELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ Y+ + +++++A
Sbjct: 956 QHVAVILNQEIRELERQQEQLVKICRNCTGCFDRHIPCVSLNCPVLYKLSRVNRELSKA 1014
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Query: 124 GVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQF 179
GV EG C +HG PY Y+ G G S+ Q+ R N + S Q
Sbjct: 38 GVGSEGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGKPSSTAQH 96
Query: 180 VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYES 239
V + +V Y +K + F+KI + P MV +L G ++ K + +E+
Sbjct: 97 VFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHEA 151
Query: 240 NVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
++ + L+ ID N+ G N I + K+RK +
Sbjct: 152 HIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 183
>gi|403289777|ref|XP_003936019.1| PREDICTED: DNA polymerase zeta catalytic subunit [Saimiri boliviensis
boliviensis]
Length = 3052
Score = 292 bits (748), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 205/600 (34%), Positives = 309/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2451 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2510
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2511 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2570
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2571 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2630
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2631 QDRALLRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2690
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2691 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2744
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2745 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2804
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2805 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2863
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII A G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2864 EPQVGERVPYVIIYGAPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 2923
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL S S S P G + L C C L +G +CS C+ +
Sbjct: 2924 GIDVFSWYHELPRIHKATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 2982
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 2983 PQHVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3042
>gi|153792012|ref|NP_002903.3| DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|143811385|sp|O60673.2|DPOLZ_HUMAN RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3-like; Short=REV3-like;
Short=hREV3
gi|225000508|gb|AAI72423.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast)
[synthetic construct]
Length = 3130
Score = 292 bits (748), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2529 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2588
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2589 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2648
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2649 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2708
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2709 QDRALSRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2768
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2769 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2822
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2823 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2882
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2883 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2941
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2942 EPQVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 3001
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL S S S P G + L C C L +G +CS C+ +
Sbjct: 3002 GIDVFSWYHELPRIHKATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 3060
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3061 PQHVAVILNQEIRELERQQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3120
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + PTMV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPTMVKRICELLQSGAIMN----KFYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|5107941|gb|AAD40184.1|AF157476_1 DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|3063675|gb|AAC24357.1| DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|3243260|gb|AAC24009.1| DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|119568679|gb|EAW48294.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast), isoform
CRA_c [Homo sapiens]
Length = 3130
Score = 292 bits (748), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2529 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2588
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2589 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2648
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2649 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2708
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2709 QDRALSRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2768
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2769 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2822
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2823 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2882
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2883 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2941
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2942 EPQVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 3001
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL S S S P G + L C C L +G +CS C+ +
Sbjct: 3002 GIDVFSWYHELPRIHKATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 3060
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3061 PQHVAVILNQEIRELERQQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3120
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + PTMV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPTMVKRICELLQSGAIMN----KFYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|410959876|ref|XP_003986524.1| PREDICTED: DNA polymerase zeta catalytic subunit [Felis catus]
Length = 3077
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 223/731 (30%), Positives = 348/731 (47%), Gaps = 92/731 (12%)
Query: 355 IVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKE-----DVHHSI- 408
I G++V E+ + + I+ DPD+++GY I YL+++ D+ I
Sbjct: 2349 ITGLEVTYAPDEKALFQEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMIS 2408
Query: 409 -----------ISDLQNGNAET------RRRLAVYCLK------------------DAYL 433
+ L N E +R ++ + D Y+
Sbjct: 2409 RVPGTKPCEYFMVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYI 2468
Query: 434 PQ-----RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIP 486
+ ++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P
Sbjct: 2469 SRVRGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTP 2528
Query: 487 NVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDAR 545
+V+Q + ++E + FY + LDF SLYPSI++AYN C+ST L E+
Sbjct: 2529 SVQQRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLG 2588
Query: 546 K----------LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAK 588
K L +PP+ + +P+G FVK +++KG+LP +LEE+L R K
Sbjct: 2589 KYDEFKFGCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVK 2648
Query: 589 ADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIE 646
+K K D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E
Sbjct: 2649 QSMKAYKQDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLE 2708
Query: 647 HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKP 706
KLV D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP
Sbjct: 2709 RAIKLVND--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKP 2762
Query: 707 IKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLH 765
+KL+FEKVY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L
Sbjct: 2763 VKLKFEKVYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLK 2822
Query: 766 KILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERM 823
+ RDI QYV+ LL + + + K + Y+ A +EL +M
Sbjct: 2823 LLFETRDISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSSSYKPGACVPALELTRKM 2881
Query: 824 RKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPL 882
D + P VG+RVPYVII A G + + P+ VL++ + ++ YY+ QI PL
Sbjct: 2882 LTYDRRSEPRVGERVPYVIIYGAPGIPLIQLVKRPVEVLQDPTLRLNATYYITKQILPPL 2941
Query: 883 LRIFEPILKNASKELLSGDH--------TRSISISTPSNSGIMKFAKRQLSCIGCKALIS 934
RIF I ++ S H T S G + L C C L
Sbjct: 2942 ARIFSLI----GIDVFSWYHELPRIQKATSSSRSELEGRKGTISQYFTTLHCPVCDDLTQ 2997
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+G +C C+ + + +++ELE +L C+ C G + + C S +CP+ ++
Sbjct: 2998 HG-ICGKCRSQPQHVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFK 3056
Query: 995 RKKAQKDMAEA 1005
+ +++++A
Sbjct: 3057 LSRVNRELSKA 3067
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 10/151 (6%)
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQFV 180
+ EG C +HG PY Y+ G G S+ Q+ R N S Q V
Sbjct: 60 IQEEGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQHV 118
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
+ +V Y +K + F+KI + P MV +L G ++ K + +E++
Sbjct: 119 FKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHEAH 173
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+ + L+ ID N+ G N I + K+RK +
Sbjct: 174 IPYLLQLFIDYNLYGMNLINLAAVKFRKARR 204
>gi|397503273|ref|XP_003822253.1| PREDICTED: DNA polymerase zeta catalytic subunit isoform 1 [Pan
paniscus]
Length = 3130
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2529 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2588
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2589 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2648
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2649 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2708
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2709 QDRALSRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2768
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2769 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2822
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2823 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2882
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2883 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2941
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2942 EPQVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 3001
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL S S S P G + L C C L +G +CS C+ +
Sbjct: 3002 GIDVFSWYHELPRIHKATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 3060
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3061 PQHVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3120
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + P MV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|410041139|ref|XP_003950950.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit
[Pan troglodytes]
Length = 3130
Score = 291 bits (746), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2529 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2588
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2589 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEXKF 2648
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2649 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2708
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2709 QDRALSRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2768
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2769 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2822
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2823 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2882
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2883 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2941
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2942 EPQVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 3001
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL S S S P G + L C C L +G +CS C+ +
Sbjct: 3002 GIDVFSWYHELPRIHKATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 3060
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3061 PQHVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3120
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + P MV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|410225886|gb|JAA10162.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan troglodytes]
gi|410267062|gb|JAA21497.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan troglodytes]
gi|410306870|gb|JAA32035.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan troglodytes]
gi|410353579|gb|JAA43393.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan troglodytes]
Length = 3130
Score = 291 bits (746), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2529 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2588
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2589 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2648
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2649 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2708
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2709 QDRALSRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2768
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2769 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2822
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2823 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2882
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2883 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2941
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2942 EPQVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 3001
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL S S S P G + L C C L +G +CS C+ +
Sbjct: 3002 GIDVFSWYHELPRIHKATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 3060
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3061 PQHVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3120
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + P MV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|332213029|ref|XP_003255622.1| PREDICTED: DNA polymerase zeta catalytic subunit [Nomascus
leucogenys]
Length = 3051
Score = 291 bits (746), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2450 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2509
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2510 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2569
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2570 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2629
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2630 QDRALSRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2689
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2690 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2743
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2744 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2803
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2804 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2862
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2863 EPQVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 2922
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL S S S P G + L C C L +G +CS C+ +
Sbjct: 2923 GIDVFSWYHELPRIHKATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 2981
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 2982 PQHVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3041
>gi|3378172|gb|AAC28460.1| DNA polymerase zeta catalytic subunit [Homo sapiens]
Length = 3052
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2451 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2510
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2511 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2570
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2571 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2630
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2631 QDRALSRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2690
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2691 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2744
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2745 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2804
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2805 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2863
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2864 EPQVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 2923
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL S S S P G + L C C L +G +CS C+ +
Sbjct: 2924 GIDVFSWYHELPRIHKATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 2982
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 2983 PQHVAVILNQEIRELERQQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3042
Score = 40.0 bits (92), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y +K + F+KI + PTMV +L G ++ K + +E+++ + L+ ID
Sbjct: 34 FYGYHEKERHFMKIYLYNPTMVKRICELLQSGAIMN----KFYQPHEAHIPYLLQLFIDY 89
Query: 252 NIVGGNWIEVPVGKYRKTAK 271
N+ G N I + K+RK +
Sbjct: 90 NLYGMNLINLAAVKFRKARR 109
>gi|397503275|ref|XP_003822254.1| PREDICTED: DNA polymerase zeta catalytic subunit isoform 2 [Pan
paniscus]
gi|397503277|ref|XP_003822255.1| PREDICTED: DNA polymerase zeta catalytic subunit isoform 3 [Pan
paniscus]
Length = 3052
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2451 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2510
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2511 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2570
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2571 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2630
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2631 QDRALSRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2690
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2691 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2744
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2745 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2804
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2805 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2863
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2864 EPQVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 2923
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL S S S P G + L C C L +G +CS C+ +
Sbjct: 2924 GIDVFSWYHELPRIHKATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 2982
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 2983 PQHVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3042
>gi|2665742|gb|AAB88486.1| DNA polymerase zeta [Homo sapiens]
Length = 3052
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2451 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2510
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2511 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2570
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2571 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2630
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2631 QDRALSRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2690
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2691 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2744
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2745 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2804
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2805 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2863
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2864 EPQVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 2923
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL S S S P G + L C C L +G +CS C+ +
Sbjct: 2924 GIDVFSWYHELPRIHKATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 2982
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 2983 PQHVAVILNQEIRELERQQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3042
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y +K + F+KI + PTMV +L G ++ K + +E+++ + L+ ID
Sbjct: 34 FYGYHEKERHFMKIYLYNPTMVKRICELLQSGAIMN----KFYQPHEAHIPYLLQLFIDY 89
Query: 252 NIVGGNWIEVPVGKYRKTAK 271
N+ G N I + K+RK +
Sbjct: 90 NLYGMNLINLAAVKFRKARR 109
>gi|344264026|ref|XP_003404095.1| PREDICTED: DNA polymerase zeta catalytic subunit [Loxodonta africana]
Length = 3158
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 202/600 (33%), Positives = 307/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+++Q
Sbjct: 2557 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQ 2616
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2617 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEFKF 2676
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2677 GCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 2736
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2737 QDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2796
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2797 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2850
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2851 VYLPCVLQTKKRYVGYMYETLEQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2910
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2911 ISLIKQYVQQQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2969
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ +L++ + ++ YY+ QI PL RIF I
Sbjct: 2970 EPRVGERVPYVIIYGTPGVPLIQLVRRPVEILQDPTLRLNATYYITKQILPPLARIFSLI 3029
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ N EL S S S P G + L C C L +G +C C+ +
Sbjct: 3030 GIDVFNWYHELPRIQKATSSSRSDPEGRKGTISQYFTTLHCPVCDDLTQHG-ICCKCRSQ 3088
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3089 PQHVTVILNQEIRELERKQEQLVKICKNCTGCYDRHIPCVSLNCPVLFKLSRVNRELSKA 3148
Score = 48.5 bits (114), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 10/144 (6%)
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQFVRHIEMVQ 187
C +HG PY Y+ G G S+ Q+ R N S Q V + +V
Sbjct: 76 TCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVS 134
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRF 247
Y +K + F+KI + P MV +L G ++ K + +E+++ + L+
Sbjct: 135 GMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAVMN----KFYQPHEAHIPYLLQL 189
Query: 248 MIDCNIVGGNWIEVPVGKYRKTAK 271
ID N+ G N I + K+RK +
Sbjct: 190 FIDYNLYGMNLINLAAVKFRKARR 213
>gi|195172253|ref|XP_002026913.1| GL12820 [Drosophila persimilis]
gi|194112681|gb|EDW34724.1| GL12820 [Drosophila persimilis]
Length = 595
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/384 (41%), Positives = 223/384 (58%), Gaps = 11/384 (2%)
Query: 25 QATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGY 84
QA P P D+E E E +++L+L + + Q + R ++ A P L
Sbjct: 14 QAKKPRNPDEDEEMDFEAELAAFENSEELDQTLLLGEGPENQQTSERWSRPAPPKLDPSK 73
Query: 85 VSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFY 144
++ FQQLD++ +G + G ++R+FGVT +G+SVCC VHGF PYFY
Sbjct: 74 ----DNLEFQQLDVENYMGQPLPGMPGAQLGPVPVVRMFGVTMQGNSVCCHVHGFCPYFY 129
Query: 145 ISCPQGMGPDDISHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPF 202
I P + L+ + RN+K V + V +E+V+K +I Y + Q +
Sbjct: 130 IEAPTKFEEYHCEKLQKSLDQKTIADIRNNKDNVQEAVLMVELVEKLNIHGYNGDQKQRY 189
Query: 203 LKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP 262
+KI V LP VA+ +L + + + + + +E+N+ F +RFM+D +VG NWIE+P
Sbjct: 190 IKITVTLPRFVAAASRLLKKEVIMAEIDFQDCRAFENNIDFDIRFMVDTGVVGCNWIELP 249
Query: 263 VGKYR---KTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH 317
G +R +K L S CQ+E D + IS PEGE+SK+APFRILSFDIECAGRKG
Sbjct: 250 QGHWRLRSGNSKPLPESRCQIEVDVAFDRFISHEPEGEWSKVAPFRILSFDIECAGRKGI 309
Query: 318 FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFI 377
FPE DPVIQ+AN+V QGE +PFIRNV TL CAPI+G V+ + E +L W F+
Sbjct: 310 FPEAKMDPVIQIANMVIRQGEPEPFIRNVFTLNVCAPIIGSQVLCHDKETQMLDKWSAFV 369
Query: 378 REVDPDVMIGYNICKFDLPYLIEK 401
REVDPD++ GYNI FD+PYLI +
Sbjct: 370 REVDPDILTGYNINNFDIPYLINR 393
Score = 129 bits (324), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 73/84 (86%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHHSII+DLQNG+ +TRRRLA+YCLKDAYLP RLL+KLM I NY+EMARVTGV +
Sbjct: 469 QKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLEKLMAIVNYMEMARVTGVSLE 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNL 483
LL+RGQ IKVLSQLLRK + + L
Sbjct: 529 CLLTRGQQIKVLSQLLRKGQDQGL 552
>gi|9957534|gb|AAG09402.1|AF179428_1 DNA polymerase zeta catalytic subunit variant 1 [Homo sapiens]
gi|9957536|gb|AAG09403.1|AF179429_1 DNA polymerase zeta catalytic subunit variant 2 [Homo sapiens]
gi|50345290|gb|AAT74627.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast) [Homo
sapiens]
gi|119568678|gb|EAW48293.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast), isoform
CRA_b [Homo sapiens]
Length = 3052
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2451 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2510
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2511 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2570
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2571 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2630
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2631 QDRALSRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2690
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2691 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2744
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2745 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2804
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2805 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2863
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2864 EPQVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 2923
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL S S S P G + L C C L +G +CS C+ +
Sbjct: 2924 GIDVFSWYHELPRIHKATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 2982
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 2983 PQHVAVILNQEIRELERQQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3042
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 192 MYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDC 251
Y +K + F+KI + PTMV +L G ++ K + +E+++ + L+ ID
Sbjct: 34 FYGYHEKERHFMKIYLYNPTMVKRICELLQSGAIMN----KFYQPHEAHIPYLLQLFIDY 89
Query: 252 NIVGGNWIEVPVGKYRKTAK 271
N+ G N I + K+RK +
Sbjct: 90 NLYGMNLINLAAVKFRKARR 109
>gi|431838720|gb|ELK00650.1| DNA polymerase zeta catalytic subunit [Pteropus alecto]
Length = 3129
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2528 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2587
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2588 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2647
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2648 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 2707
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2708 QDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2767
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2768 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2821
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2822 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2881
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2882 ISLIKQYVQLQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2940
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2941 EPRVGERVPYVIIYGPPGIPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 3000
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ N EL S S + P G + L C C L +G +CS C+ +
Sbjct: 3001 GIDVFNWYHELPRMQKATSSSRNEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 3059
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3060 PQHVAVILNQEIRELERKQEQLIKICKNCTGCFDRHIPCVSLNCPVLFKLFRVNRELSKA 3119
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGYGQHPESYLSQMAFSIDRALNVALGSPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + P MV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKAKR 187
>gi|363732318|ref|XP_426179.3| PREDICTED: DNA polymerase zeta catalytic subunit [Gallus gallus]
Length = 3154
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 219/683 (32%), Positives = 341/683 (49%), Gaps = 67/683 (9%)
Query: 367 RDVLLAWRDFIREVDPDVM------IGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETR 420
R +L WR EV+ +M +G+++ P + ++SD + A+
Sbjct: 2485 RIILNIWRMMRNEVN--LMNYTFENVGFHVLHQRFPLFTFR------VLSDWFDNKADVY 2536
Query: 421 R-RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAK 479
R ++ + + + +LL KL I EMAR+ G+ +L+RG +V S +LR AK
Sbjct: 2537 RWKMVDHYVSRVHGNLQLLQKLDLIDRTSEMARLFGIQFLHVLTRGSQYRVESMMLRVAK 2596
Query: 480 QKNL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST 537
N V P+++Q + ++E + FY + LDF SLYPSI++AYN C+ST
Sbjct: 2597 PMNYIPVTPSIQQRAQMKAPQCVPLIMEPESRFYSNAVLVLDFQSLYPSIVIAYNYCFST 2656
Query: 538 LVTP------EDARK-----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEE 579
+ P DA K L +PP+ + +PSG FVK +++KG+LP +LEE
Sbjct: 2657 CLGPVENLGKYDAFKFGCTSLRVPPDLLYQIRHDITVSPSGVAFVKPSVRKGVLPRMLEE 2716
Query: 580 LLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSV 637
+L R K +K K D +L+ RQL LK AN YG+T A G++PCIE+ S+
Sbjct: 2717 ILKTRIMVKQSMKAYKHDKAITRMLEARQLGLKYIANFTYGYTAANFSGRMPCIELGDSI 2776
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
R+ +E KLV D T G A V+YGDTDS+ V T E + K+G+E A+
Sbjct: 2777 VHKARETLERAIKLVND--TKKWG----AHVVYGDTDSMFVLLKGATKEQSFKIGQEIAE 2830
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLV 756
++ T KP+KL+FEKVY P +L +KKRY G +Y T +K D KGIETVRRD+C V
Sbjct: 2831 AVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAV 2890
Query: 757 KNLVTECLHKILVD-RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA 815
++ EC K+L + RDI QYV++ LL + + + K +Y +A
Sbjct: 2891 SKIL-ECSIKLLFETRDISQIKQYVQNQCMKLLEGKASIQDFIFAK-------EYRGSSA 2942
Query: 816 H--------VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NI 866
+ +E+ RM D + P VG+RVPYVI+ G + P VL++ ++
Sbjct: 2943 YKPGSCVPALEITRRMLAYDRRSEPRVGERVPYVIVYGMPGLPLIQLVRRPTEVLQDPSL 3002
Query: 867 PIDTHYYLENQISKPLLRIFEPI---LKNASKELLSGDHTRSISIST-PSNSGIMKFAKR 922
++ YY+ QI PL R+F I + + EL T S + S G +
Sbjct: 3003 RLNATYYITKQILPPLARVFSLIGIDVFSWYHELPRIQKTASTARSELEGRKGTISQYFT 3062
Query: 923 QLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV 982
L C C L G +C+ C+ + + +++ELE +L C+ C G + +
Sbjct: 3063 TLHCPVCDELTQYG-ICTKCRSQPQHVAVILNQEIRELERKQDQLVKICKNCTGCFDRQI 3121
Query: 983 LCTSRDCPIFYRRKKAQKDMAEA 1005
C S +CP+ ++ + +++ +A
Sbjct: 3122 PCVSLNCPVLFKLSRVSRELLKA 3144
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 10/147 (6%)
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQFVRHIE 184
G C +HG PY Y+ G G + Q+ R N S Q V +
Sbjct: 36 GQKTCLHLHGVFPYLYVPY-DGFGQHPEHYLRQVAFSIDRALNVALGNPSSTIQHVFKVS 94
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFA 244
+V Y +++ Q F+KI + P MV +L G ++ KS+ +E+++ +
Sbjct: 95 LVSGMPFYGYHEKERQ-FMKIYLYNPAMVKRVCELLQGGAIMN----KSYQPHEAHIPYL 149
Query: 245 LRFMIDCNIVGGNWIEVPVGKYRKTAK 271
L+ ID N+ G N I + K+RK +
Sbjct: 150 LQLFIDYNLYGMNLINLAAVKFRKARR 176
>gi|355562137|gb|EHH18769.1| hypothetical protein EGK_15435, partial [Macaca mulatta]
Length = 3081
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 203/600 (33%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2480 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2539
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2540 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2599
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2600 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2659
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2660 QDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2719
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2720 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2773
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2774 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2833
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2834 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2892
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2893 EPQVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 2952
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL + S S P G + L C C L +G +CS C+ +
Sbjct: 2953 GIDVFSWYHELPRIHKATNSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 3011
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3012 PQHVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKVSRVNRELSKA 3071
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQFVRHIE 184
G C +HG PY Y+ G G S+ Q+ R N S Q V +
Sbjct: 1 GQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVS 59
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFA 244
+V Y +K + F+KI + P +V +L G ++ K + +E+++ +
Sbjct: 60 LVSGMPFYGY-HEKERHFMKIYLYNPAVVKRICELLQSGAIMN----KFYQPHEAHIPYL 114
Query: 245 LRFMIDCNIVGGNWIEVPVGKYRKTAK 271
L+ ID N+ G N I + K+RK +
Sbjct: 115 LQLFIDYNLYGMNLINLAAVKFRKARR 141
>gi|355748973|gb|EHH53456.1| hypothetical protein EGM_14100, partial [Macaca fascicularis]
Length = 3081
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 203/600 (33%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2480 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2539
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2540 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2599
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2600 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2659
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2660 QDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2719
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2720 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2773
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2774 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2833
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2834 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2892
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2893 EPQVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 2952
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL + S S P G + L C C L +G +CS C+ +
Sbjct: 2953 GIDVFSWYHELPRIHKATNSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 3011
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3012 PQHVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKVSRVNRELSKA 3071
Score = 48.5 bits (114), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQFVRHIE 184
G C +HG PY Y+ G G S+ Q+ R N S Q V +
Sbjct: 1 GQKTCLHLHGVFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVS 59
Query: 185 MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFA 244
+V Y +K + F+KI + P +V +L G ++ K + +E+++ +
Sbjct: 60 LVSGMPFYGY-HEKERHFMKIYLYNPAVVKRICELLQSGAIMN----KFYQPHEAHIPYL 114
Query: 245 LRFMIDCNIVGGNWIEVPVGKYRKTAK 271
L+ ID N+ G N I + K+RK +
Sbjct: 115 LQLFIDYNLYGMNLINLAAVKFRKARR 141
>gi|337732501|gb|AEI71773.1| DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 259/913 (28%), Positives = 416/913 (45%), Gaps = 153/913 (16%)
Query: 97 DIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI 156
DI+Y+ + ++P + +IR+FG T G +C V G Y Y P
Sbjct: 97 DIEYLPYNYRHHVIP----TGTVIRLFGKTVNGVKICVNVFGQLSYIYCEVPSE------ 146
Query: 157 SHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC 216
++ H +++ M E N+N V + MY + KI T +
Sbjct: 147 TYLHDVMKKYMYENNKNFTFST------AVDNKFSMYGFNRSPVTVYKITF---TDYFAA 197
Query: 217 RGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV---PVGKYRKTAKTL 273
R + G L+ +K YE++V RF ID + W V + +Y+ + ++L
Sbjct: 198 R---EAGRMLEAQKIK---VYETSVDVLSRFYIDNDYPSFGWYTVQKYSINEYKFSNQSL 251
Query: 274 -------SYCQL------EFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH--- 317
C L E+DCL DI G F + + I K
Sbjct: 252 EISCSVKDLCPLDEDIWPEYDCLTFDIECMSESGGFPNASVQSDIVIQISAVLHKTGSDN 311
Query: 318 -----FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP--IVGVDVMSFETERDVL 370
F T DP I A++ E + ++ +K +P I G ++++F+ ++
Sbjct: 312 MDVHLFTLGTCDP-IDDAHIYEFPCEYELIYAFLIFVKQVSPEIITGYNIINFDLNYLII 370
Query: 371 LAWRDFIREVDP---------------DVMIGYN-----------ICKFDLPYLI----- 399
A + + V D G+N IC P +
Sbjct: 371 RATKLYRLSVGEFTKLKKGLLCIKSTNDFKQGFNCIKTKVYASGMICIDFYPVCVGKITS 430
Query: 400 ---------------EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFI 444
KED+ + I + R ++ YC++D+ + + L K +
Sbjct: 431 DNYKLDTIANLCLGKHKEDMPYKRIPIEFISGSGGRCKVGRYCIQDSVIVKELFCKFNYH 490
Query: 445 FNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG---TYEGA 501
++++ +PI +++ GQ +V + +L + +++N++IP+ K A E G +Y GA
Sbjct: 491 MEASAISKLAYLPIRKVINDGQQRRVFTCILHETRKRNMLIPD-KIAPRETGEDESYRGA 549
Query: 502 TVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV-TPEDARKLN---LPPECVNKT 557
TVL+ G+Y P+ +DFASLYPSIM+A NL YSTL+ ED ++ + VNK
Sbjct: 550 TVLDPHVGYYASPVIVMDFASLYPSIMIANNLYYSTLILNDEDVTGIDEKDILTVHVNKN 609
Query: 558 PSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSV 617
+ FV+S +++ IL +L L RK KA +K +DP+ +LD +QLALK++ N+
Sbjct: 610 -TVYRFVRSGVRESILGTLLSRWLRKRKEVKARMKRCEDPMLALILDKQQLALKVTCNAF 668
Query: 618 YGFTGATVGQLPCIEISSSVTSYGRQMIEHT----------KKLVEDKFTTVGG---YEH 664
YGFTGA G LPC+ +++S+TS GR M+ T ++ V +KF G +
Sbjct: 669 YGFTGAVHGLLPCLPLAASITSIGRDMLRQTSDFINNVLSSREYVSEKFGLSDGDFQGDF 728
Query: 665 NAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISK 723
+ VIYGDTDSV V E + + + ++S FI+PIKLEFEK++ P +LI K
Sbjct: 729 SLNVIYGDTDSVFVCVKNIVPERLAGICADISAHVSSQLFIEPIKLEFEKMFLPLMLICK 788
Query: 724 KRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKST 783
KRY G + + D++ KG+E VR+ +C VKN+V + + D ++ A +
Sbjct: 789 KRYVGKMFDS----DELVMKGVELVRKTSCPFVKNIVKGIVRLLFWDSEVARAAVELSQM 844
Query: 784 ISD------------------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVE 818
D L N++D++ LV++ L+K Y + H+
Sbjct: 845 SCDEVIRNGLPAGIHKIIDIIIGARDRLYTNKVDVNELVLSTMLSKEISMYKQPNLPHLR 904
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAA-KGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
+ ER+R R+ P VGDRV YV+I + K YE SEDP+YV+ENNIPI+ Y E Q
Sbjct: 905 VIERLRNRNEE-VPVVGDRVSYVLISSMDKNVANYELSEDPLYVIENNIPINAERYFE-Q 962
Query: 878 ISKPLLRIFEPIL 890
+ K + I PI+
Sbjct: 963 LVKAVSNIICPII 975
>gi|291396775|ref|XP_002714966.1| PREDICTED: DNA polymerase zeta [Oryctolagus cuniculus]
Length = 3128
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 204/604 (33%), Positives = 309/604 (51%), Gaps = 46/604 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2527 QMLEQLDVIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2586
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2587 MRAPQCIPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2646
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2647 GCTSLRIPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 2706
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN YG+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2707 QDRALSRMLNARQLGLKLIANVTYGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2766
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2767 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTSTNPKPVKLKFEK 2820
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2821 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2880
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y A +EL +M D +
Sbjct: 2881 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYRPGACVPALELTRKMLTYDRRS 2939
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII + G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2940 EPRVGERVPYVIIYGSPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 2999
Query: 890 LKNASKELLSGDHT--RSISISTPSNS------GIMKFAKRQLSCIGCKALISNGTLCSH 941
++ S H R S+ S S G + L C C L +G +CS
Sbjct: 3000 ----GIDVFSWYHELPRIHKASSSSRSELEGRKGTISQYFTTLHCPVCDELTQHG-ICSK 3054
Query: 942 CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKD 1001
C+ + + +++ELE +L C+ C G + + C S +CP+ ++ + ++
Sbjct: 3055 CRSQPQHVAIILNQEIRELERKQEQLTKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRE 3114
Query: 1002 MAEA 1005
+++A
Sbjct: 3115 LSKA 3118
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + P MV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK+ +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKSRR 187
>gi|444709084|gb|ELW50116.1| DNA polymerase zeta catalytic subunit [Tupaia chinensis]
Length = 3196
Score = 288 bits (738), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 202/604 (33%), Positives = 307/604 (50%), Gaps = 46/604 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2595 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2654
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2655 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2714
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ V +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2715 GCTSLRVPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2774
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2775 QDRALSRMLNARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2834
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2835 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2888
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2889 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2948
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2949 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 3007
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 3008 EPRVGERVPYVIIYGTPGIPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 3067
Query: 890 LKNASKELLSGDH--------TRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSH 941
++ S H T S T G + L C C L +G +CS
Sbjct: 3068 ----GIDVFSWYHELPRIQKATSSSRSETEGRKGTISQYFTTLHCPVCDDLTQHG-ICSK 3122
Query: 942 CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKD 1001
C+ + + +++E+E +L C+ C G + + C S +CP+ ++ + ++
Sbjct: 3123 CRSQPQHVAVILNQEIREMERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRE 3182
Query: 1002 MAEA 1005
+++A
Sbjct: 3183 LSKA 3186
>gi|255542648|ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
Length = 2066
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 205/632 (32%), Positives = 313/632 (49%), Gaps = 52/632 (8%)
Query: 412 LQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVL 471
+G R R Y + A L ++++L I E+ARV G+ +LSRG +V
Sbjct: 556 FSSGPGRARYRCIEYMVHRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVE 615
Query: 472 SQLLRKAKQKNL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMM 529
S LLR A +N + P +Q S+ V+E +GFY P+ LDF SLYPS+++
Sbjct: 616 SMLLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMII 675
Query: 530 AYNLCYSTLVTPEDARKLNL--------PPECVNK-------TPSGETFVKSNLQKGILP 574
AYNLC+ T + + K+N P + TP+G +V S ++KG+LP
Sbjct: 676 AYNLCFCTCLGNVSSSKVNTLGVSSFSPDPRVLGDLKDEILLTPNGVMYVPSKVRKGVLP 735
Query: 575 EILEELLAAR---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPC 630
+LEE+L+ R K+A L + L + + + RQLALK+ AN YG+T A G++PC
Sbjct: 736 RLLEEILSTRIMVKQAMKKLAPTQQVLHR-IFNARQLALKLIANVTYGYTAAGFSGRMPC 794
Query: 631 IEISSSVTSYGRQMIEHTKKLVE--DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAA 688
E++ S+ GR +E LV DK+ NA VIYGDTDS+ V TVE +
Sbjct: 795 AELADSIVQCGRSTLEKAISLVNASDKW--------NARVIYGDTDSMFVLLKGRTVEES 846
Query: 689 MKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIET 747
++GRE A ++ P+ L+ EKVY+P L++KKRY G + + ++ + + D KGIET
Sbjct: 847 FQIGREIASAVTAMNPDPVTLKLEKVYHPCFLLTKKRYVGYSYESADQTEPVFDAKGIET 906
Query: 748 VRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTG 807
VRRD C V ++ + L +DI Y++ + +L R+ L + K + + G
Sbjct: 907 VRRDTCGAVAKMLEQSLRLFFEHQDISEIKGYLQRQWTRILSGRVSLQDFIFAKEV-RLG 965
Query: 808 DDYEVKAAH-----VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL 862
Y +AA LA + K D P +RVPYV+I GA+ + DP+ +L
Sbjct: 966 -TYSTRAASSLPPAAILATKAMKVDPRAEPRYAERVPYVVIHGEPGARLVDMVVDPLDLL 1024
Query: 863 ENNIP--IDTHYYLENQISKPLLRIFEPILKNASKELLS----GDHTRSISISTPSNSGI 916
+ P ++ YY+ QI L R+F + + ++ L G T + S SN
Sbjct: 1025 AIDSPYRLNDIYYISKQIIPALQRVFGLLGADLNQWFLEMPRPGRDTYAKRPSYGSNPQR 1084
Query: 917 MKFAKRQLS--CIGCKALISNGT-LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQE 973
+ LS C+ C L++ T LC+ C +E + + +LE L C+
Sbjct: 1085 TRIDYYYLSKHCVLCDELVNASTRLCNKCSQKETAAATAVIGRTSKLEREMQHLAAICRH 1144
Query: 974 CQGS---LHQDVLCTSRDCPIFYRRKKAQKDM 1002
C G L V CTS C +FY R+K QK++
Sbjct: 1145 CGGGDWLLESGVKCTSLACSVFYERRKVQKEL 1176
>gi|326676933|ref|XP_002665692.2| PREDICTED: DNA polymerase zeta catalytic subunit [Danio rerio]
Length = 1615
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 207/611 (33%), Positives = 304/611 (49%), Gaps = 57/611 (9%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
+LL + I E+ARV G+ +L+RG +V S +LR AK N V P+ +Q
Sbjct: 1010 QLLQQQDIIGRTSELARVFGIQFYHVLTRGSQYRVESMMLRVAKPMNYIPVTPSTQQRAQ 1069
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-------LVTPEDAR- 545
++ V+E + FY + LDF SLYPSI++AYN CYST L T ++ +
Sbjct: 1070 QRAAQCIPLVMEPESRFYSNSVIVLDFQSLYPSIVIAYNYCYSTCLGHIENLGTYDEFKF 1129
Query: 546 ---KLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVKS++++G+LP +LEE+L R K +K +
Sbjct: 1130 GCASLRVPPDLLYQLRNDITVSPNGVAFVKSSVRRGVLPRMLEEILKTRIMVKQSMKAYR 1189
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PC+E+ S+ R+ +E K+V
Sbjct: 1190 NDKALSRLLDARQLGLKLIANVTFGYTSANFSGRMPCVEVGDSIVHKARETLERAIKMVN 1249
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D + A V+YGDTDS+ V T E A K+G E A+ ++ T KPIKL+FEK
Sbjct: 1250 DT------KKWGARVVYGDTDSMFVLLKGATKEQAFKIGNEIAEAVTATNPKPIKLKFEK 1303
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y + ++ D KGIETVRRD C V ++ L + RD
Sbjct: 1304 VYLPCILQTKKRYVGYMYESVDQENPVFDAKGIETVRRDGCPGVSKILERSLKLLFESRD 1363
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ ++ + + L K +G Y A +EL RM D
Sbjct: 1364 ISQVKQYVQRQCVKVVEGKASMQDLTFAKEYRGSG-SYRPGACVPALELTRRMMAFDRRL 1422
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVI+ + G + P+ VL++ ++ ++ YY+ QI PL RIF I
Sbjct: 1423 EPRVGERVPYVIVYGSPGVPLIQLVRRPLEVLQDPSLRLNATYYITKQILPPLARIFNLI 1482
Query: 890 ---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQ----LSCIGCKALISNGTLCSHC 942
+ + EL S + S G K Q L C C L G +C+ C
Sbjct: 1483 GVDVFSWYHELPRVQRAWSFTSSGRGEEGTKKGTISQYFTTLHCPVCDELTQLG-VCARC 1541
Query: 943 KGREAELYCKTVSQVQELEVLFGRLWTQ--------CQECQGSLHQDVLCTSRDCPIFYR 994
+ AE C V Q+L RLW C+ C GS + V C S DCPI Y+
Sbjct: 1542 R---AEPQCVAVHLHQDL-----RLWESQQDQLLKICRSCSGSAERQVPCVSLDCPILYK 1593
Query: 995 RKKAQKDMAEA 1005
+ ++++
Sbjct: 1594 LSRVNRNLSRG 1604
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
++RIFG T G C +HG PY Y+ G G + + Q+ R N + P
Sbjct: 37 VVRIFGATPAGQKTCLHLHGIFPYIYVPY-DGFGQEADRYLRQVAYSIDRALNISMGNPS 95
Query: 179 F-VRHIEMVQKRSIM----YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
V+HI V + M Y+ ++KS F+KI + P MV +L G ++ KS
Sbjct: 96 SNVQHIFKVVLVTGMPFYGYHMREKS--FMKIFLYNPQMVKRVSELLQAGAVMN----KS 149
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLS 274
F +E+++ F L+ ID N+ G N I + K+RK+ T S
Sbjct: 150 FQPHEAHIPFLLQLFIDYNLYGMNMISLAAVKFRKSRATAS 190
>gi|449454163|ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101222413
[Cucumis sativus]
Length = 2868
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 218/680 (32%), Positives = 331/680 (48%), Gaps = 59/680 (8%)
Query: 367 RDVLLAWRDFIREVDPDV----MIGYNICKFDLPYLIEKEDVHHSIISDLQN-GNAETRR 421
R VL WR EV ++ + + + LPY +HH +++ N G + R
Sbjct: 1339 RIVLNLWRLMRNEVKLNIYTLEAVAEAVLRRKLPY------IHHRVLTQWFNSGPRQARF 1392
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R Y ++ A L +L+ +L I E+ARV G+ +LSRG +V S LLR A +
Sbjct: 1393 RCIEYMMERAKLNLQLISQLDMINRTSELARVFGIEFFSVLSRGSQYRVESMLLRLAHSQ 1452
Query: 482 NL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL- 538
N V P Q S+ V+E +GFY P+ LDF SLYPS+++AYNLC+ T
Sbjct: 1453 NYLAVSPGNLQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMIIAYNLCFCTCL 1512
Query: 539 --VTPEDARKLNL---PPE--CVNK-------TPSGETFVKSNLQKGILPEILEELLAAR 584
V P L + PE +N+ TP+G +V ++KGILP +LEE+L R
Sbjct: 1513 GKVVPSKVNTLGVISYSPEQQVLNELKDQILFTPNGVMYVTPKVRKGILPRLLEEILLTR 1572
Query: 585 KRAKADLKEAKDPLEKA---VLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
K ++K+ P +K V + RQLALK+ AN YG+T A G++PC E++ S+
Sbjct: 1573 IMVKQEMKKLA-PSQKVLQRVFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQC 1631
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
GR+ +E V + + A+VIYGDTDS+ V TV+ A +G+E A IS
Sbjct: 1632 GRRTLESAISFVNSQ------EKWKAKVIYGDTDSMFVLLKGRTVKQAFGIGQEIASAIS 1685
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNL 759
P+ L+ EKVY P L++KKRY G + +PE+ + D KGIETVRRD C V
Sbjct: 1686 AMNPNPVTLKMEKVYSPCFLLTKKRYVGYSFESPEQIEPTFDAKGIETVRRDTCAAVAKT 1745
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAA 815
+ + L +DI Y++ +L R+ + V K G ++ + A
Sbjct: 1746 MEQSLRLFFEHQDISEIKTYLQRQWKRILSGRVSIQDFVFAKEVRLGTYRSRGPSALPPA 1805
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP--IDTHYY 873
+ + MR D P +R+PYV+I GA+ + DP+ +L + P +++ YY
Sbjct: 1806 AIVATKAMRI-DPRAEPRYAERIPYVVIYREPGARLADMVVDPMDLLAVDSPYRLNSLYY 1864
Query: 874 LENQISKPLLRIFEPILKNASKELLSGDH-------TRSISISTPSNSGIMKFAKRQLSC 926
+ QI L R F + N ++ L + +S + P+ + I + + C
Sbjct: 1865 INKQIIPALQRAFGLVGANLNQWFLEMPRPVREVFFKQPVSAANPNRTRIDYYYLSK-HC 1923
Query: 927 IGCKALI-SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGS---LHQDV 982
I C L+ ++ LC+ C EA + + +LE L CQ C G+ + V
Sbjct: 1924 ILCGELVQTSSNLCNQCLQNEAASTTTIIRRTSKLESEMQHLAAICQHCGGADGIVEFGV 1983
Query: 983 LCTSRDCPIFYRRKKAQKDM 1002
CTS C +FY R KAQK++
Sbjct: 1984 KCTSLACSVFYERLKAQKEL 2003
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQ--------GMGPDDI-SHFHQILEGRMRE 169
++RI+G T G C VHG PY Y+ C + G+G + + ++ LE ++
Sbjct: 46 VLRIYGSTPAGQKTCVHVHGVLPYLYVPCSEILLPLNDKGVGGEALGNNVSLALEKALKL 105
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL 229
+ Q V +V+ + + Y + + F+KI + P + +L G L+
Sbjct: 106 KGNSGSKRQHVHGYNLVRAKKLYGYHSSE-EFFIKIYLYYPQDITRAANLLLNGAVLE-- 162
Query: 230 GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
KS YES++ F L+F++D N+ G + + K+R
Sbjct: 163 --KSLQPYESHIPFVLQFLVDYNLYGMGLLHLVKLKFR 198
>gi|281347901|gb|EFB23485.1| hypothetical protein PANDA_020229 [Ailuropoda melanoleuca]
Length = 3134
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 202/600 (33%), Positives = 308/600 (51%), Gaps = 40/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2535 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2594
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2595 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2654
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2655 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 2714
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2715 QDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2774
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2775 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2828
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2829 VYLPCVLQTKKRYVGYMYETLEQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2888
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2889 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2947
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2948 EPRVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 3007
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ N EL ++ S S P G + L C C + +G +C C+ +
Sbjct: 3008 GIDVFNWYHELPRIQ--KAASRSEPEGRKGTISQYFTTLHCPVCDDVTQHG-ICGKCRSQ 3064
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3065 PQHVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3124
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 15/158 (9%)
Query: 123 FGVTREG-----HSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RN 173
FG T C +HG PY Y+ G G S+ Q+ R N
Sbjct: 41 FGATAHAAGPRCQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNP 99
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
S Q V + +V Y +K + F+KI + P MV +L G ++ K
Sbjct: 100 SSTAQHVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KF 154
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+ +E+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 YQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 192
>gi|301789010|ref|XP_002929922.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Ailuropoda
melanoleuca]
Length = 3129
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 202/600 (33%), Positives = 308/600 (51%), Gaps = 40/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2530 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2589
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2590 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2649
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2650 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 2709
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2710 QDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2769
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2770 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2823
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2824 VYLPCVLQTKKRYVGYMYETLEQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2883
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2884 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2942
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2943 EPRVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 3002
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ N EL ++ S S P G + L C C + +G +C C+ +
Sbjct: 3003 GIDVFNWYHELPRIQ--KAASRSEPEGRKGTISQYFTTLHCPVCDDVTQHG-ICGKCRSQ 3059
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3060 PQHVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3119
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPCGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + P MV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|1304154|dbj|BAA11461.1| DNA polymerase [Mus musculus]
Length = 755
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 199/600 (33%), Positives = 305/600 (50%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+++Q
Sbjct: 154 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQ 213
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 214 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 273
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ V +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 274 GCTSLRVPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYK 333
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 334 QDRALSRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 393
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D + A V+YGDTDS+ V T E + K+G+E A+ ++ T +P+KL+FEK
Sbjct: 394 DT------KKWGARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPRPVKLKFEK 447
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 448 VYLPCVLQTKKRYVGYMYETLDQKEPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 507
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV L+ + + + K + Y A +EL +M D +
Sbjct: 508 ISLIKQYVHRQCMKLVEGKASIQDFIFAKEY-RGSFSYRPGACVPALELTRKMLAYDRRS 566
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P VL++ + ++ YY+ QI PL RIF I
Sbjct: 567 EPRVGERVPYVIIYGTPGLPLIQLIRRPAEVLQDPTLRLNATYYITKQILPPLARIFSLI 626
Query: 890 ---LKNASKELLSGDHTRSISIS-TPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + +EL S S S G + L C C L +G +CS C+ +
Sbjct: 627 GIDVFSWYQELPRIQKATSSSRSELEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 685
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C GS + + C S +CP+ ++ + +++++A
Sbjct: 686 PQHVAIILNQEIRELERKQEQLIKICRNCTGSFDRHIPCVSLNCPVLFKLSRVNRELSKA 745
>gi|395534778|ref|XP_003769414.1| PREDICTED: DNA polymerase zeta catalytic subunit [Sarcophilus
harrisii]
Length = 3136
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 200/600 (33%), Positives = 308/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2535 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRAQ 2594
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY I LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2595 MRAPQCVPLIMEPESRFYSNSILVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEFKF 2654
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2655 GCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2714
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2715 QDRALSRMLNARQLGLKLIANVTFGYTSANYSGRMPCIEVGDSIVHKARETLERAIKLVN 2774
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2775 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2828
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ + + RD
Sbjct: 2829 VYLPCVLQTKKRYVGYMYETLEQKDPVFDAKGIETVRRDSCPAVSKILERSIKLLFETRD 2888
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + L ++ K + Y+ A +EL +M D +
Sbjct: 2889 ISQIKQYVQRQCIKLLEGKASLQDVIFAKEY-RGSFSYKPGACVPALELTRKMLAYDRRS 2947
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVI+ G + P+ VL++ ++ ++ YY+ QI PL RIF I
Sbjct: 2948 EPRVGERVPYVIVYGLPGVPLIQLVRRPVEVLQDSSLRLNATYYITKQILPPLARIFSLI 3007
Query: 890 LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQ----LSCIGCKALISNGTLCSHCKGR 945
+ + ++ S+ S K Q L C C L +G +CS C+ +
Sbjct: 3008 GIDVFSWYQELPRIQKVTTSSHSEHEGRKGTISQYFTTLHCPVCDELTQHG-ICSKCRSQ 3066
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++E E +L C+ C G + + C S +CPI ++ + +++++A
Sbjct: 3067 PQHVAVVLNQEIREWERQQEQLVKICKNCTGCCDRQIQCVSLNCPILFKLSRVSRELSKA 3126
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 8/150 (5%)
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP-QFVRHI 183
V +EG C +HG PY Y+ G G + Q+ R N P V+H+
Sbjct: 29 VGKEGQKTCLHLHGIFPYLYVPY-DGCGQQPERYLRQMAFSIDRALNVALGNPSSTVQHV 87
Query: 184 EMVQKRSIM--YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNV 241
V S M Y +K + F+KI + P MV +L G ++ K + +E+++
Sbjct: 88 FKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KYYQPHEAHI 143
Query: 242 LFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+ L+ ID N+ G N I + ++RK +
Sbjct: 144 PYLLQLFIDYNLYGMNLINLAAVRFRKVKR 173
>gi|351697832|gb|EHB00751.1| DNA polymerase zeta catalytic subunit [Heterocephalus glaber]
Length = 3119
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 198/604 (32%), Positives = 308/604 (50%), Gaps = 46/604 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+++Q
Sbjct: 2518 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQ 2577
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2578 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYEEFKF 2637
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2638 GCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSVKAYK 2697
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2698 QDKALSRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2757
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2758 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2811
Query: 714 VYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G + + ++ D + D KGIETVRRD+C V ++ L + RD
Sbjct: 2812 VYLPCVLQTKKRYVGYMYESLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2871
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2872 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSSSYKPGACVPALELTRKMLTYDRRS 2930
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P +L++ + ++ YY+ QI PL RIF I
Sbjct: 2931 EPRVGERVPYVIIYGTPGVPLIQLVRRPAELLQDPTLRLNAIYYITKQILPPLARIFSLI 2990
Query: 890 LKNASKELLSGDH--------TRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSH 941
++ S H T S+ G + L C C L +G +C+
Sbjct: 2991 ----GIDVFSWYHELPRIQKATNSLRGELEGRKGTISQYFTTLHCPVCDDLTQHG-ICNK 3045
Query: 942 CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKD 1001
C+ + + +++ELE +L C+ C GS + + C S +CP+ ++ + +D
Sbjct: 3046 CRSQPQHVAVILNQEIRELEHKQEQLVKICKNCTGSFDRHIPCVSLNCPVLFKLTRVNRD 3105
Query: 1002 MAEA 1005
+++A
Sbjct: 3106 LSKA 3109
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + P MV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|334324484|ref|XP_003340527.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase zeta catalytic
subunit-like [Monodelphis domestica]
Length = 3156
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 200/604 (33%), Positives = 312/604 (51%), Gaps = 46/604 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+++Q
Sbjct: 2555 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSMQQRAQ 2614
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2615 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEYKF 2674
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2675 GCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKTYK 2734
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2735 QDRALSRMLNARQLGLKLIANVTFGYTAANYSGRMPCIEVGDSIVHKARETLERAIKLVN 2794
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2795 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2848
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ + + RD
Sbjct: 2849 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSIKLLFETRD 2908
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + L ++ K + Y+ A +EL +M D +
Sbjct: 2909 ISQIKQYVQRQCIKLLEGKASLQDVIFAKEY-RGSSSYKPGACVPALELTRKMLAYDRRS 2967
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVI+ G + P+ VL++ ++ ++ YY+ QI PL RIF I
Sbjct: 2968 EPRVGERVPYVIVYGLPGIPLIQLVRRPLEVLQDSSLRLNATYYITKQILPPLARIFSLI 3027
Query: 890 LKNASKELLSGDHT--RSISISTPSNS------GIMKFAKRQLSCIGCKALISNGTLCSH 941
++ S H R ++T ++S G + L C C L +G +CS
Sbjct: 3028 ----GIDVFSWYHELPRIQKVTTSAHSEHEGRKGTISQYFTTLHCPVCDELTQHG-ICSK 3082
Query: 942 CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKD 1001
C+ + + +++E E +L C+ C G + + C S +CPI ++ + ++
Sbjct: 3083 CRSQPQHVAIVLNQEIREWERQQEQLVKICKNCTGCCDRQIQCVSLNCPILFKLSRVSRE 3142
Query: 1002 MAEA 1005
+++A
Sbjct: 3143 LSKA 3146
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP-QFVR 181
FG T G C +HG PY Y+ G G + Q+ R N P V+
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGCGQQPERYLRQMAFSIDRALNVALGNPSSTVQ 99
Query: 182 HIEMVQKRSIM--YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYES 239
H+ V S M Y +K + F+KI + P MV +L G ++ K + +E+
Sbjct: 100 HVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KYYQPHEA 155
Query: 240 NVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
++ + L+ ID N+ G N I + ++RK +
Sbjct: 156 HIPYLLQLFIDYNLYGMNLINLAAVRFRKVKR 187
>gi|380805135|gb|AFE74443.1| DNA polymerase delta catalytic subunit, partial [Macaca mulatta]
Length = 415
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/214 (64%), Positives = 176/214 (82%), Gaps = 2/214 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQNGN +TRRRLAVYCLKDAYLP RLL++LM + N VEMARVTGVP+S
Sbjct: 204 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLS 263
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LLSRGQ +KV+SQLLR+A + L++P V+ G E Y GATV+E G+Y+ PIATLD
Sbjct: 264 YLLSRGQQVKVVSQLLRQAMHEGLLMPVVRSEGGED--YTGATVIEPLKGYYDVPIATLD 321
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
F+SLYPSIMMA+NLCY+TL+ P A+KL L + KTP+G+ FVK++++KG+LP+ILE
Sbjct: 322 FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILEN 381
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKIS 613
LL+ARKRAKA+L + DPL + VLDGRQLALK+S
Sbjct: 382 LLSARKRAKAELAKETDPLRRQVLDGRQLALKVS 415
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 96/128 (75%)
Query: 274 SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLV 333
+ CQLE D L+SD++S PEG + ++AP R+LSFDIECAGRKG FPEP DPVIQ+ +L
Sbjct: 1 TQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLG 60
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
GE++PF+R +TL+ CAPI+G V S+E E D+L AW FIR +DPDV+ GYNI F
Sbjct: 61 LRWGEQEPFLRLALTLRPCAPILGAKVQSYEKEEDLLQAWSTFIRIMDPDVITGYNIQNF 120
Query: 394 DLPYLIEK 401
DLPYLI +
Sbjct: 121 DLPYLISR 128
>gi|153792337|ref|NP_035394.2| DNA polymerase zeta catalytic subunit [Mus musculus]
gi|341940501|sp|Q61493.3|DPOLZ_MOUSE RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3-like; Short=REV3-like;
AltName: Full=Seizure-related protein 4
Length = 3122
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 201/600 (33%), Positives = 307/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+++Q
Sbjct: 2521 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQ 2580
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2581 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2640
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ V +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2641 GCTSLRVPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYK 2700
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2701 QDRALSRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2760
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T +P+KL+FEK
Sbjct: 2761 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPRPVKLKFEK 2814
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2815 VYLPCVLQTKKRYVGYMYETLDQKEPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2874
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ L+ + + + K + Y A +EL +M D +
Sbjct: 2875 ISLIKQYVQRQCMKLVEGKASIQDFIFAKEY-RGSFSYRPGACVPALELTRKMLAYDRRS 2933
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P VL++ + ++ YY+ QI PL RIF I
Sbjct: 2934 EPRVGERVPYVIIYGTPGLPLIQLIRRPAEVLQDPTLRLNATYYITKQILPPLARIFSLI 2993
Query: 890 ---LKNASKELLSGDHTRSISIST-PSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + +EL S S S G + L C C L +G +CS C+ +
Sbjct: 2994 GIDVFSWYQELPRIQKATSSSRSELEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 3052
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C GS + + C S +CP+ ++ + +++++A
Sbjct: 3053 PQHVAIILNQEIRELERKQEQLIKICRNCTGSFDRHIPCVSLNCPVLFKLSRVNRELSKA 3112
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + P MV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KCYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|148672985|gb|EDL04932.1| REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S.
cerevisiae) [Mus musculus]
Length = 3090
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 201/600 (33%), Positives = 307/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+++Q
Sbjct: 2489 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQ 2548
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2549 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2608
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ V +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2609 GCTSLRVPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYK 2668
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2669 QDRALSRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2728
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T +P+KL+FEK
Sbjct: 2729 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPRPVKLKFEK 2782
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2783 VYLPCVLQTKKRYVGYMYETLDQKEPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2842
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ L+ + + + K + Y A +EL +M D +
Sbjct: 2843 ISLIKQYVQRQCMKLVEGKASIQDFIFAKEY-RGSFSYRPGACVPALELTRKMLAYDRRS 2901
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P VL++ + ++ YY+ QI PL RIF I
Sbjct: 2902 EPRVGERVPYVIIYGTPGLPLIQLIRRPAEVLQDPTLRLNATYYITKQILPPLARIFSLI 2961
Query: 890 ---LKNASKELLSGDHTRSISIST-PSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + +EL S S S G + L C C L +G +CS C+ +
Sbjct: 2962 GIDVFSWYQELPRIQKATSSSRSELEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 3020
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C GS + + C S +CP+ ++ + +++++A
Sbjct: 3021 PQHVAIILNQEIRELERKQEQLIKICRNCTGSFDRHIPCVSLNCPVLFKLSRVNRELSKA 3080
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNS 174
++R+FG T G C +HG PY Y+ G G S+ Q+ R N S
Sbjct: 5 VVRVFGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPS 63
Query: 175 KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
Q V + +V Y +K + F+KI + P MV +L G ++ K +
Sbjct: 64 STAQHVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KCY 118
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+E+++ + L+ ID N+ G N I + K+RK +
Sbjct: 119 QPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 155
>gi|145312253|ref|NP_001077435.1| DNA polymerase zeta catalytic subunit [Rattus norvegicus]
Length = 3132
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 200/600 (33%), Positives = 307/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2531 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2590
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2591 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHIENLGKYDEFKF 2650
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K +
Sbjct: 2651 GCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYR 2710
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2711 QDRALSRMLNARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2770
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2771 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2824
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2825 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2884
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ L+ + + + K + Y A +EL +M D +
Sbjct: 2885 ISLIKQYVQRQCMKLVEGKASIQDFIFAKEY-RGSFSYRPGACVPALELTRKMLAYDRRS 2943
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVI+ G + P VL++ + ++ YY+ QI PL RIF I
Sbjct: 2944 EPRVGERVPYVIVYGTPGLPLIQLIRRPAEVLQDPTLRLNATYYITKQILPPLARIFSLI 3003
Query: 890 ---LKNASKELLSGDHTRSISIST-PSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + +EL S S S G + L C C L +G +CS C+ +
Sbjct: 3004 GIDVFSWYQELPRIQKATSSSRSDLEGRKGTISQYFTTLHCPVCDGLTQHG-ICSQCRSQ 3062
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C GS + + C S +CP+ ++ + +++++A
Sbjct: 3063 PQHVAIILNQEIRELERQQEQLVKICRNCTGSFDRHIPCVSLNCPVLFKLSRVNRELSKA 3122
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G + Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGVFPYLYVPY-DGYGQQPERYLSQMALSIDRALNVALGNPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + P MV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|354485585|ref|XP_003504964.1| PREDICTED: DNA polymerase zeta catalytic subunit [Cricetulus griseus]
Length = 3050
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 204/605 (33%), Positives = 309/605 (51%), Gaps = 48/605 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2449 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRFAKPMNYIPVTPSVQQRSQ 2508
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2509 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYEEFKF 2568
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2569 GCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSIRKGVLPRMLEEILKTRFMVKQSMKAYK 2628
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2629 QDRALSRMLNARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2688
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2689 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2742
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD-R 771
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ EC K+L + R
Sbjct: 2743 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKIL-ECSLKLLFETR 2801
Query: 772 DIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAA 829
DI QYV+ L+ + + + K + Y A +EL +M D
Sbjct: 2802 DISLIKQYVQRQCMKLVEGKASIQDFIFAKEY-RGSFSYRPGACVPALELTRKMLTYDRR 2860
Query: 830 TAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEP 888
+ P VG+RVPYVII G + P VL++ + ++ YY+ QI PL RIF
Sbjct: 2861 SEPRVGERVPYVIIYGTPGLPLIQLIRRPSEVLQDPTLRLNATYYITKQILPPLARIFSL 2920
Query: 889 ILKNASKELLSGDH--------TRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCS 940
I ++ S H T S G + L C C L +G +CS
Sbjct: 2921 I----GIDVFSWYHELPRIQKATSSSRSELEGRKGTISQYFTTLHCPVCDDLTQHG-ICS 2975
Query: 941 HCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQK 1000
C+ + + +++ELE +L C+ C GS + + C S +CP+ ++ + +
Sbjct: 2976 KCRSQPQHVAVILNQEIRELERKQEQLVKICRNCTGSFDRHIPCVSLNCPVLFKLSRVNR 3035
Query: 1001 DMAEA 1005
++++A
Sbjct: 3036 ELSKA 3040
>gi|149032985|gb|EDL87826.1| REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S.
cerevisiae) [Rattus norvegicus]
Length = 3054
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 200/600 (33%), Positives = 307/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2453 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2512
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2513 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHIENLGKYDEFKF 2572
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K +
Sbjct: 2573 GCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYR 2632
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2633 QDRALSRMLNARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2692
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2693 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2746
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2747 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2806
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ L+ + + + K + Y A +EL +M D +
Sbjct: 2807 ISLIKQYVQRQCMKLVEGKASIQDFIFAKEY-RGSFSYRPGACVPALELTRKMLAYDRRS 2865
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVI+ G + P VL++ + ++ YY+ QI PL RIF I
Sbjct: 2866 EPRVGERVPYVIVYGTPGLPLIQLIRRPAEVLQDPTLRLNATYYITKQILPPLARIFSLI 2925
Query: 890 ---LKNASKELLSGDHTRSISIST-PSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + +EL S S S G + L C C L +G +CS C+ +
Sbjct: 2926 GIDVFSWYQELPRIQKATSSSRSDLEGRKGTISQYFTTLHCPVCDGLTQHG-ICSQCRSQ 2984
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C GS + + C S +CP+ ++ + +++++A
Sbjct: 2985 PQHVAIILNQEIRELERQQEQLVKICRNCTGSFDRHIPCVSLNCPVLFKLSRVNRELSKA 3044
>gi|296199021|ref|XP_002747079.1| PREDICTED: DNA polymerase zeta catalytic subunit [Callithrix jacchus]
Length = 3127
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 307/600 (51%), Gaps = 40/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2528 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2587
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2588 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2647
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2648 GCTSLRVPPDLLYQVRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2707
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2708 QDRALLRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2767
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+ E A+ ++ T KP+KL+FEK
Sbjct: 2768 D--TKKWG----ARVVYGDTDSMFVLLKGATNEQSFKI--EIAEAVTATNPKPVKLKFEK 2819
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2820 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2879
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2880 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2938
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII A G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2939 EPQVGERVPYVIIYGAPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 2998
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL S S S P G + L C C L +G +CS C+ +
Sbjct: 2999 GIDVFSWYHELPRIHKATSSSRSEPEGRKGTISQYFTTLHCPVCDELTQHG-ICSKCRSQ 3057
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3058 PQHVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3117
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + P MV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|6978946|dbj|BAA90768.1| DNA polymerase [Mus musculus]
Length = 3122
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 201/600 (33%), Positives = 306/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+++Q
Sbjct: 2521 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQ 2580
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2581 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2640
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ V +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2641 GCTSLRVPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYK 2700
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2701 QDRALSRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2760
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T +P+KL+FEK
Sbjct: 2761 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPRPVKLKFEK 2814
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2815 VYLPCVLQTKKRYVGYMYETLDQKEPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2874
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV L+ + + + K + Y A +EL +M D +
Sbjct: 2875 ISLIKQYVHRQCMKLVEGKASIQDFIFAKEY-RGSFSYRPGACVPALELTRKMLAYDRRS 2933
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P VL++ + ++ YY+ QI PL RIF I
Sbjct: 2934 EPRVGERVPYVIIYGTPGLPLIQLIRRPAEVLQDPTLRLNATYYITKQILPPLARIFSLI 2993
Query: 890 ---LKNASKELLSGDHTRSISIST-PSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + +EL S S S G + L C C L +G +CS C+ +
Sbjct: 2994 GIDVFSWYQELPRIQKATSSSRSELEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 3052
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C GS + + C S +CP+ ++ + +++++A
Sbjct: 3053 PQHVAIILNQEIRELERKQEQLIKICRNCTGSFDRHIPCVSLNCPVLFKLSRVNRELSKA 3112
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALANPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + P MV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KCYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|4079831|gb|AAC98785.1| DNA polymerase zeta catalytic subunit [Mus musculus]
Length = 3122
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 201/600 (33%), Positives = 306/600 (51%), Gaps = 38/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+++Q
Sbjct: 2521 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQ 2580
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2581 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2640
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ V +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2641 GCTSLRVPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYK 2700
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L+ RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2701 QDRALSRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2760
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T +P+KL+FEK
Sbjct: 2761 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPRPVKLKFEK 2814
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2815 VYLPCVLQTKKRYVGYMYETLDQKEPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2874
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV L+ + + + K + Y A +EL +M D +
Sbjct: 2875 ISLIKQYVHRQCMKLVEGKASIQDFIFAKEY-RGSFSYRPGACVPALELTRKMLAYDRRS 2933
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P VL++ + ++ YY+ QI PL RIF I
Sbjct: 2934 EPRVGERVPYVIIYGTPGLPLIQLIRRPAEVLQDPTLRLNATYYITKQILPPLARIFSLI 2993
Query: 890 ---LKNASKELLSGDHTRSISIST-PSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + +EL S S S G + L C C L +G +CS C+ +
Sbjct: 2994 GIDVFSWYQELPRIQKATSSSRSELEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQ 3052
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C GS + + C S +CP+ ++ + +++++A
Sbjct: 3053 PQHVAIILNQEIRELERKQEQLIKICRNCTGSFDRHIPCVSLNCPVLFKLSRVNRELSKA 3112
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + P MV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KCYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|260823502|ref|XP_002604222.1| hypothetical protein BRAFLDRAFT_262795 [Branchiostoma floridae]
gi|229289547|gb|EEN60233.1| hypothetical protein BRAFLDRAFT_262795 [Branchiostoma floridae]
Length = 813
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 196/601 (32%), Positives = 301/601 (50%), Gaps = 41/601 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
+LL+++ I E+AR+ G+ +L+RG +V S +LR AK N V P+++Q
Sbjct: 210 QLLEQMDLIGRTSELARLFGIQFYHVLTRGSQYRVESMMLRIAKPMNYIAVSPSMQQRAR 269
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-------LVTPED--- 543
++ +LE + FY P+ LDF SLYPSI++AYN CY+T L P +
Sbjct: 270 QRAPECLPLILEPESRFYTHPVLVLDFQSLYPSIVIAYNYCYTTCLGRVEHLSEPGEFEF 329
Query: 544 -ARKLNLPPECVNK-------TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP + K +P+G F+ +++KG+LP +L+++L R K +K+ K
Sbjct: 330 GCSSLKVPPGTLRKLQDRLTVSPNGVAFITKDVRKGVLPGMLQDILNTRIMVKKSMKDYK 389
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +L RQL LK+ AN YG+T A G++ CIEI+ S+ R+ +E +LV
Sbjct: 390 QDKNLTRMLHSRQLGLKLIANVTYGYTSANFSGRMACIEIADSIVRKARETLERAIRLVN 449
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D + A V+YGDTDS+ V + + A ++G+E A+ ++ KP+KL+FEK
Sbjct: 450 DT------PKWGARVVYGDTDSMFVLLKGASKDRAFQIGQEIAETVTADNPKPVKLKFEK 503
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD C ++ L + +D
Sbjct: 504 VYLPCVLQTKKRYVGYMYETQDQKEPVFDAKGIETVRRDGCPAASKILECSLKTLFTCKD 563
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV---ELAERMRKRDAA 829
+ QYV+ + LL R + +I K G Y A V E+A R+ D
Sbjct: 564 VSQVKQYVERQCTKLLEGRASMQDCIIAK--EYRGMAYYRPTACVPALEIARRLLSSDRR 621
Query: 830 TAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEP 888
P VG+RVPYVI+ + G + P VL + N+ ++ YY+ QI L R+F
Sbjct: 622 AEPRVGERVPYVIVYGSPGLPLIQLVRQPHEVLTDPNLRLNATYYINKQILPALNRVFSL 681
Query: 889 ILKNASKELLSGDHTRSISIST----PSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKG 944
I + T I+ T S G + + ++C C G +C+HC+G
Sbjct: 682 IGVDVFSWYRELPRTNRIAAPTRLLPDSRKGTISQFFQTVNCPVCNGPAQQG-VCTHCQG 740
Query: 945 REAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAE 1004
+ +Q++ E + L C+ C GS Q C S DCP+ Y+ KA+ D+
Sbjct: 741 DPQLVAVTLNNQIRAWERTYQHLQQVCRSCTGSPGQPS-CISLDCPVLYKYVKAKNDVER 799
Query: 1005 A 1005
A
Sbjct: 800 A 800
>gi|427785295|gb|JAA58099.1| Putative dna polymerase [Rhipicephalus pulchellus]
Length = 4474
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 189/607 (31%), Positives = 298/607 (49%), Gaps = 53/607 (8%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
LLD+L +MA + G+ +LSRG +V S LLR A+ +V + Q +
Sbjct: 3880 LLDELNVFGKTSQMASIFGIQFYEVLSRGSQFRVESMLLRLARSHRMVALSASTAQRARQ 3939
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---------TPEDAR 545
+ VLE RA Y P+ LDF SLYPS+++++N C+ST + P
Sbjct: 3940 RAPEFIPLVLEPRAQLYTDPVVVLDFQSLYPSVIISHNYCFSTCLGRVENLGSSAPFGCS 3999
Query: 546 KLNLPPECVNK-------TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPL 598
L +P +CV +P+G FVK ++++G+LP++L+E+L R K + + +
Sbjct: 4000 SLEVPLQCVKNLRDHITVSPAGVAFVKPSIRRGLLPQMLDEVLGTRIMVKKAMSQCTNKG 4059
Query: 599 EKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFT 657
+ VLD +QL+LK+ +N YG+T A+ G++PC+E++ SV S GR+ +E + E
Sbjct: 4060 LQRVLDAQQLSLKLISNVTYGYTAASFSGRMPCVEVADSVVSKGREALEQAIRTAE---A 4116
Query: 658 TVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYP 717
TV G A V+YGDTDS+ V + E A +LG+E AD ++ +P++L+ EKVY P
Sbjct: 4117 TVPG----ARVVYGDTDSLFVLLEGRSREEAFRLGQEIADRVTAQNPRPMRLKLEKVYQP 4172
Query: 718 YLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA 776
+L +KKRY G + +P++ + K D KGIETVRRD C V L+ + L + RD+
Sbjct: 4173 CVLQTKKRYVGFSYESPDQLEPKYDAKGIETVRRDTCPAVAKLLEKMLRVLFTSRDMVAV 4232
Query: 777 VQYVKSTISDLLMNRMDLSLLVIT---KGLTKTGDDYEVKAAHVELAERMRKRDAATAPN 833
++VK S +L R+ + +GL V A +E+ R +RD P
Sbjct: 4233 KRFVKLQFSKILAERVSPQDFIFAREFRGLHGYQPSACVPA--LEITRRQLRRDPRAEPL 4290
Query: 834 VGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNA 893
VG+RVPYV++ G + E P+ +L + ++ HYY+ I L R+
Sbjct: 4291 VGERVPYVVVYGHPGQRLIELVRSPLELLSGQLRLNAHYYVARVIGPALNRVL------- 4343
Query: 894 SKELLSGD-------HTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGRE 946
LL D R +STP + + C+ C + LC+ C+
Sbjct: 4344 --RLLGADCLQWYEELPRPRFVSTPRPGTMAAYVVVNQLCLACGGQAESRQLCASCEADP 4401
Query: 947 AELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAK 1006
+VQ ++ L T C C G +C S DCP+ + K + EA+
Sbjct: 4402 GYAALILGGKVQRVQKALLELQTVCHSCMG-FQAGSVCLSIDCPVLF---KTSRVTTEAQ 4457
Query: 1007 LQLDRWN 1013
++ WN
Sbjct: 4458 QAIE-WN 4463
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 47/208 (22%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRM-----REANRN 173
++RIFGVT G C VHG PY + C + P+ F +L + A R
Sbjct: 37 VLRIFGVTPAGQKACLHVHGALPYLTVPCTEPR-PE---RFAVVLASEIDLLLNTAAGRA 92
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
+ + + V H+ V + + +Y + + FL+I + P V +L L G +K
Sbjct: 93 TSMHRHVHHV-AVFRGTRLYGFHDREETFLRIYLYNPNHVPKVAELL-----LSGHVLKQ 146
Query: 234 FMT-YESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT--------AKTL----------- 273
M +E+++ +AL+FM+D + G +++ V K+R+ +K L
Sbjct: 147 TMQPHEAHIPYALQFMVDHKLHGMSFVRVESFKFRRPLSWAHDDRSKALGSGPGIWSLRN 206
Query: 274 ------------SYCQLEFDCLYSDIIS 289
+ C+LE DC DI++
Sbjct: 207 LPVELFGDLEKQTTCELELDCCAKDILN 234
>gi|343963237|gb|AEM72538.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 274/527 (51%), Gaps = 56/527 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + + R + YC+ D+ L +L KL+F + +AR++ + ++
Sbjct: 494 KKHSVPYKQIPVLFRRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMN 553
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L A+++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 554 KVIFDGQQSRIFTCMLAAARREGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 611
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T D L + T +G FVK +++K IL ++L
Sbjct: 612 FASLYPSIIQAYNLCYCTLITDNDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLL 671
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KDPL + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 672 TSWLAERKAVREKLKHCKDPLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 731
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V +V+YGDTDSV V
Sbjct: 732 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVLLC- 790
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 791 -GIEDADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 845
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 846 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 905
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPN 833
L NR+D+ L ++ LT+ D Y + H+ + + +R PN
Sbjct: 906 KLVALITDARERLYENRVDIHELQLSATLTQACDKYKQQNLPHLTVVRKKLERREEI-PN 964
Query: 834 VGDRVPYVIIKAAKGAKA-YERSEDPIYVLENNIPIDTHYYLENQIS 879
GDR+ YV++ A Y +EDP YV +N+ I+ Y N IS
Sbjct: 965 TGDRIFYVLLAHPDERVANYVIAEDPDYVETHNLQINCSKYFSNLIS 1011
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 153/340 (45%), Gaps = 39/340 (11%)
Query: 100 YVIGDSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPD 154
+ D + E LP S + AII + G T +G VC VHG YFY++
Sbjct: 135 FCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATR 194
Query: 155 DISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM-V 213
D +++ +E++ S V ++ V K S+M + S P+L + + +
Sbjct: 195 DA--VSKVMSNLEKESSSCSYV------VKQVNKMSLMGFNTNTS-PYLMMSFSNHFVGK 245
Query: 214 ASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL 273
+ R + D LD F +E V RF++D W + R+T+K
Sbjct: 246 EAARNLKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD- 294
Query: 274 SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQV 329
S C+LE DC D+ E+ ++ ++FDIEC FP+ T+ D +IQ+
Sbjct: 295 SNCELELDCCVGDLQVLRDRVEWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQI 351
Query: 330 ANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYN 389
+ V + +++ TL SCA I GV + +E +++ ++ F+R P+ + GYN
Sbjct: 352 S-CVCFDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYN 410
Query: 390 ICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
I FD+PY+I + + ++Q G +R + C K
Sbjct: 411 INAFDIPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 445
>gi|322709541|gb|EFZ01117.1| hypothetical protein MAA_03713 [Metarhizium anisopliae ARSEF 23]
Length = 1698
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 207/674 (30%), Positives = 331/674 (49%), Gaps = 48/674 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y++ +L+ + H+S + S ++G +
Sbjct: 1013 TGRHMINIWRAMRGELN---LLQYSLENVAW-HLLHRRVPHYSWRTLTSWYKSGKSSDLG 1068
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R+ Y + ++L+ I E AR+ GV + SRG KV S + R AK +
Sbjct: 1069 RVIRYYQTRTLMDIQILETNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1128
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ KQ GS+ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1129 NFILVSPSRKQVGSQNALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFL 1188
Query: 540 T-------------PEDARK---LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
E R+ L L + +N P+G +VKS ++K +L ++L E+L
Sbjct: 1189 GRITNWRGVNKMGFTEYKRQEGLLALLKDYINIAPNGMMYVKSEIRKSLLAKMLTEILET 1248
Query: 584 RKRAKADLKEAKD-PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K KD + + +L+ RQLALK+ AN YG+ A+ G++PC EI+ S+ G
Sbjct: 1249 RVMVKSGMKSDKDDKVLQQLLNNRQLALKLLANVTYGYASASFSGRMPCSEIADSIVQTG 1308
Query: 642 RQMIEHTKKLVE--DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
R+ +E + D++ AEV+YGDTDS+ V T + A ++G E A I
Sbjct: 1309 RETLERATAYIHSVDRW--------GAEVVYGDTDSLFVYLKGRTRDQAFEIGNEIAKAI 1360
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKN 758
+ +P+KL+FEKVY+P +L++KKRY G + N ++ + D KGIETVRRD +
Sbjct: 1361 TDINPQPVKLKFEKVYHPCVLLAKKRYVGYKYENKDQVTPEFDAKGIETVRRDGTPAEQK 1420
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHV 817
+ + L + D+ +Y + +L + + + + T D A
Sbjct: 1421 IEEKALKLLFETADLSQIKEYFQKQCDKILRGAVSVQDFCFAREVRLGTYSDKGPPPAGA 1480
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLEN 876
++ + DA P G+RVPYV+I A GA+ +RS P +L N + +D YY+
Sbjct: 1481 LISTKKMLEDARAEPQYGERVPYVVITGAPGARLIDRSVAPEDLLANPHWQLDAEYYISK 1540
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFA----KRQLSCIGCKAL 932
+ PL RIF + N + + I S P++ G K R C+ C A
Sbjct: 1541 NLIPPLERIFNLVGANVRQWYDEMPKVQRIRRS-PNDPGAKKMTLESYMRSTHCLVCGAK 1599
Query: 933 ISN--GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDC 989
+ TLC C+G +++ E + + + CQ C G S +DV C S+DC
Sbjct: 1600 FAQEGQTLCPACRGNTPASLFMLQTRLATEERGYQDVLSICQTCSGLSPLEDVRCDSKDC 1659
Query: 990 PIFYRRKKAQKDMA 1003
P+F+ R K + +A
Sbjct: 1660 PVFWTRTKQRTKVA 1673
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 14/157 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF----HQILEGRMREANRNS 174
++RIFG T G VC VHG PY Y+ + PD++ + H ++ + + R
Sbjct: 42 VVRIFGSTETGQKVCAHVHGAFPYLYVEYDGDLAPDEVGAYIYRLHLSIDHALAVSYRRD 101
Query: 175 KV---PQFVRHIEMVQKRSIMYYQ-QQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
+ +FV I +V + I +Y + FLKI + P ++ +L +G+ +
Sbjct: 102 QYGEDAKFVARITLV--KGIPFYGFHVGYRFFLKIYMFNPIVMTRLADLLQQGVIMK--- 156
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ F YE+++ + L+FM+D N+ G ++E +R
Sbjct: 157 -RKFQPYEAHLQYLLQFMVDYNLYGCGYLESSKTAFR 192
>gi|343963246|gb|AEM72544.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 274/527 (51%), Gaps = 56/527 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + + R + YC+ D+ L +L KL+F + +AR++ + ++
Sbjct: 494 KKHSVPYKQIPVLFRRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMN 553
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L A+++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 554 KVIFDGQQSRIFTCMLAAARREGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 611
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T D L + T +G FVK +++K IL ++L
Sbjct: 612 FASLYPSIIQAYNLCYCTLITDNDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLL 671
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KDPL + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 672 TSWLAERKAVREKLKHCKDPLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 731
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V +V+YGDTDSV V
Sbjct: 732 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVLLC- 790
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 791 -GIEDADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 845
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 846 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 905
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPN 833
L NR+D+ L ++ LT+ D Y + H+ + + +R PN
Sbjct: 906 KLVALITDARERLYENRVDIHELQLSATLTQACDKYKQQNLPHLTVVRKKLERREEI-PN 964
Query: 834 VGDRVPYVIIKAAKGAKA-YERSEDPIYVLENNIPIDTHYYLENQIS 879
GDR+ YV++ A Y +EDP YV +N+ I+ Y N IS
Sbjct: 965 TGDRIFYVLLAHPDERVANYVIAEDPDYVETHNLQINCSKYFSNLIS 1011
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 152/336 (45%), Gaps = 39/336 (11%)
Query: 104 DSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D + E LP S + AII + G T +G VC VHG YFY++ D
Sbjct: 139 DVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATRDA-- 196
Query: 159 FHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM-VASCR 217
+++ +E++ S V ++ V K S+M + S P+L + + + + R
Sbjct: 197 VSKVMSNLEKESSSCSYV------VKPVNKMSLMGFNTNTS-PYLMMSFSNHFVGKEAAR 249
Query: 218 GILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQ 277
+ D LD F +E V RF++D W + R+T+K S C+
Sbjct: 250 NLKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD-SNCE 298
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQVANLV 333
LE DC D+ E+ ++ ++FDIEC FP+ T+ D +IQ++ V
Sbjct: 299 LELDCCVGDLQVLRDRVEWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS-CV 354
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
+ +++ TL SCA I GV + +E +++ ++ F+R P+ + GYNI F
Sbjct: 355 CFDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAF 414
Query: 394 DLPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
D+PY+I + + ++Q G +R + C K
Sbjct: 415 DIPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 445
>gi|343963234|gb|AEM72536.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 274/527 (51%), Gaps = 56/527 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + + R + YC+ D+ L +L KL+F + +AR++ + ++
Sbjct: 494 KKHSVPYKQIPVLFRRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMN 553
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L A+++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 554 KVIFDGQQSRIFTCMLAAARREGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 611
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T D L + T +G FVK +++K IL ++L
Sbjct: 612 FASLYPSIIQAYNLCYCTLITDNDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLL 671
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KDPL + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 672 TSWLAERKAVREKLKHCKDPLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 731
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V +V+YGDTDSV V
Sbjct: 732 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVLLC- 790
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 791 -GIEDADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 845
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 846 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 905
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPN 833
L NR+D+ L ++ LT+ D Y + H+ + + +R PN
Sbjct: 906 KLVALITDARERLYENRVDIHELQLSATLTQACDKYKQQNLPHLTVVRKKLERREEI-PN 964
Query: 834 VGDRVPYVIIKAAKGAKA-YERSEDPIYVLENNIPIDTHYYLENQIS 879
GDR+ YV++ A Y +EDP YV +N+ I+ Y N IS
Sbjct: 965 TGDRIFYVLLAHPDERVANYVIAEDPDYVETHNLQINCSKYFSNLIS 1011
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 152/336 (45%), Gaps = 39/336 (11%)
Query: 104 DSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D + E LP S + AII + G T +G VC VHG YFY++ D
Sbjct: 139 DVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATRDA-- 196
Query: 159 FHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM-VASCR 217
+++ +E++ S V ++ V K S+M + S P+L + + + + R
Sbjct: 197 VSKVMSNLEKESSSCSYV------VKPVNKMSLMGFNTNTS-PYLMMSFSNHFVGKEAAR 249
Query: 218 GILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQ 277
+ D LD F +E V RF++D W + R+T+K S C+
Sbjct: 250 NLKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD-SNCE 298
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQVANLV 333
LE DC D+ E+ ++ ++FDIEC FP+ T+ D +IQ++ V
Sbjct: 299 LELDCCVGDLQVIRDRVEWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS-CV 354
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
+ +++ TL SCA I GV + +E +++ ++ F+R P+ + GYNI F
Sbjct: 355 CFDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAF 414
Query: 394 DLPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
D+PY+I + + ++Q G +R + C K
Sbjct: 415 DIPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 445
>gi|198432213|ref|XP_002124430.1| PREDICTED: similar to REV3-like, catalytic subunit of DNA polymerase
zeta RAD54 like (S. cerevisiae) [Ciona intestinalis]
Length = 2161
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 192/613 (31%), Positives = 297/613 (48%), Gaps = 51/613 (8%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGS 493
+L+ + + E+AR+ G+ +L+RG +V S +LR +N V PN Q
Sbjct: 1544 KLMSQQDMVGRTSELARLFGIQFYDVLTRGTQFRVESMMLRIVHSQNYVAVSPNQMQRAY 1603
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT-----------PE 542
+ A V+E + FY +P+ +DF SLYPSI++AYN CYST + P
Sbjct: 1604 MKAPECIALVMEPESRFYHEPVVVVDFQSLYPSIIIAYNYCYSTCLGRVQHLGSHNNFPF 1663
Query: 543 DARKLNLPPECVNK---------TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKE 593
L +PP ++K P+ +VKS ++KGILP +LEE+L R K +K+
Sbjct: 1664 GCTSLKVPPRTLHKLLKRDGVTVAPNAVAYVKSFIRKGILPTMLEEILETRIMVKTSIKK 1723
Query: 594 AKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLV 652
D K +LD RQL LK+ AN YG+T A G++PC+EI+ S+ R+ +E + +LV
Sbjct: 1724 CDDSATKRMLDHRQLGLKLIANVTYGYTSANFSGRMPCVEIADSIVHKARETLERSIRLV 1783
Query: 653 EDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTV-EAAMKLGREAADYISGTFIKPIKLEF 711
T GG V+YGDTDS+ V T + A ++GRE I+ +P+KL+
Sbjct: 1784 NSNHTRWGG-----RVVYGDTDSMFVALRPSTSKQRAFEIGREIVKEITNANPRPVKLKL 1838
Query: 712 EKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTECLHKILVD 770
EK+Y P +L +KKRY G + + ++ + + D KGIETVRRD C V ++ + LH +
Sbjct: 1839 EKIYQPCILQTKKRYVGYAYESEDQIEPIFDAKGIETVRRDGCPAVSKILEKSLHTLFKT 1898
Query: 771 RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE---LAERMRKRD 827
RD+ YV+ S LL R + I K G Y A V LA +M D
Sbjct: 1899 RDVSKVKSYVEQQCSKLLDGRSTVKDCTIAKEY--RGAKYYKPGAVVPALVLARKMMAVD 1956
Query: 828 AATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIF 886
+ P VG+RVPY+++ A G ++ P ++ + + ++ YY+ + L R+
Sbjct: 1957 KRSEPRVGERVPYIVVHGAPGTPLFQLVHPPQDLISDLGLRLNGAYYVTKMVLPALDRMM 2016
Query: 887 E-------------PILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI 933
P + L DH S ++ S + + C+ C L
Sbjct: 2017 SLLGVDVFQWLRDMPRSGRLTTHRLQLDHKGECSSASTSRKATISQYFKSKHCLSCTKL- 2075
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLH-QDVLCTSRDCPIF 992
S +LCS C R++ K V + + LE + C C G+ Q + C DCP+
Sbjct: 2076 SKRSLCSRCLSRDSITSVKLVMESRALERKKNLIDQICMNCTGAASPQLIKCICLDCPVL 2135
Query: 993 YRRKKAQKDMAEA 1005
Y+R K + D ++A
Sbjct: 2136 YKRFKLRMDESKA 2148
>gi|409051564|gb|EKM61040.1| hypothetical protein PHACADRAFT_204189 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1614
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 209/648 (32%), Positives = 304/648 (46%), Gaps = 77/648 (11%)
Query: 418 ETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRK 477
E RL YCL A + +L+ I E ARV GV +LSRG KV S + R
Sbjct: 924 EHTSRLIRYCLARATIVVEMLEVAEVITKNSEFARVFGVDFFSVLSRGSQFKVESFMFRI 983
Query: 478 AKQKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCY 535
AK ++ V+ P+ + G + ++E + FY P+ LDF SLYPS+M+AYN CY
Sbjct: 984 AKPESFVLLSPSKQDVGKQNAAECMPLIMEPLSAFYSSPLVVLDFQSLYPSVMIAYNYCY 1043
Query: 536 STLV---------TPEDARKLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEE 579
ST + +L+ PPE +N +P+G FVK ++KG+L +L E
Sbjct: 1044 STCLGRVVDFKGQNKFGVSELHQPPELLKTLEDYINISPNGMVFVKPAVRKGLLGRMLTE 1103
Query: 580 LLAARKRAKADLKEAKD-----PLEK---------------AVLDGRQLALKISANSVYG 619
LL R K +K KD L K VL+ RQL+LK AN YG
Sbjct: 1104 LLDTRVMVKQAMKRVKDNKAYLTLSKYYAYTHLGYRYQALSRVLEARQLSLKFIANVTYG 1163
Query: 620 FTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMV 678
+T AT G++P +EI+ ++ GR+ +E +L++ T G A V+YGDTDS+ +
Sbjct: 1164 YTSATYSGRMPAVEIADAIVQTGRETLEKAIRLIDS--TPKWG----ARVVYGDTDSLFI 1217
Query: 679 QFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKF 737
T E A ++G++ AD ++ T PIKL+FEKVY P +L++KKRY G + +P E+
Sbjct: 1218 YLRGKTKEQAFRIGQDIADTVTATSPAPIKLKFEKVYLPCVLLAKKRYVGFKYESPDEEE 1277
Query: 738 DKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLL 797
D KGIETVRRD + +V CL + +D+ Y ST + +L NR L
Sbjct: 1278 PSFDAKGIETVRRDGVPAQQKMVETCLKILFRTQDLSQVKDYCCSTWAQILENRASLQDF 1337
Query: 798 VITKG--LTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERS 855
+ K L G+D V +A R DA GDRVPYVI++ A GA+ +R+
Sbjct: 1338 IFAKEVRLGTYGNDGPPPPG-VAVATRRMLEDANDEIQYGDRVPYVIVRGAPGARLVDRA 1396
Query: 856 EDPIYVL-ENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSN- 913
P VL + ++ +D HYY+ + PL RIF L A + R+ P++
Sbjct: 1397 VPPEAVLNDGHLRLDAHYYITRVLIPPLERIFN--LVGADVRGWYDEAPRAHRAEAPADP 1454
Query: 914 --------------------SGIMKFAKRQLS--CIGCKALI-SNGTLCSHCKGREAELY 950
+G + + LS C+ C++ LC C R E
Sbjct: 1455 SLTPRRRARQQQQQHQQEALAGRPRIDEHFLSAHCLACRSPTEEESALCEACCSRPQETI 1514
Query: 951 CKTVSQVQELEVLFGRLWTQCQECQGSLHQD-VLCTSRDCPIFYRRKK 997
+++V E + C C G + V C S DC + R K
Sbjct: 1515 GTLLARVHRTERRLADVHRVCASCSGVPQAEPVRCVSLDCAWLFERTK 1562
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 98 IDYVIGDSNRELLPLSSGS---AAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPD 154
IDY++ + PL +G+ IIRI+G + G C VH PYF++ + P
Sbjct: 15 IDYIVEPAG----PLDNGALPRVPIIRIYGESSVGKKACLHVHQVYPYFFVEYDGQVKPG 70
Query: 155 DISHFHQILEGRMREA-------NRNSKVPQFVRHIEMVQKRSIMYYQQQKS-QPFLKIV 206
+++++ L + A N NS Q VR I +V + + +Y S PFLK+
Sbjct: 71 NVNNYIAKLSHSLNHAISLSLKRNPNSHNSQVVRAIVLV--KGVHFYGFHASYSPFLKVH 128
Query: 207 VALPTMVASCRGILDRGIQL--DGLGMKS-FMTYESNVLFALRFMIDCNIVGGNWIEV 261
+A P +++R + L G MK+ F YES++ F L+FM D + G WI++
Sbjct: 129 IADP-------ALMNRAVTLMRSGTVMKTHFRIYESHLSFPLQFMCDFGLYGCGWIDL 179
>gi|356504040|ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777934 [Glycine max]
Length = 2793
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 208/681 (30%), Positives = 328/681 (48%), Gaps = 57/681 (8%)
Query: 367 RDVLLAWRDFIREVDPDV----MIGYNICKFDLPYLIEKEDVHHSIISD-LQNGNAETRR 421
R VL AWR EV ++ + ++ + +P HH +++ +G R
Sbjct: 1265 RIVLNAWRLIRGEVKLNLYSVEAVAESVLRRKIPSF------HHKVLTKWFSSGPGRARY 1318
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R Y ++ A L ++++L + E+ARV G+ +LSRG +V S LR A +
Sbjct: 1319 RCIKYVIERAKLNLEIINQLDMVNRTSELARVFGIEFFSVLSRGSQYRVESMFLRLAHTQ 1378
Query: 482 NL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N + P +Q S+ V+E +GFY P+ LDF SLYPS+++AYNLC+ T +
Sbjct: 1379 NYLAISPGKQQVASQPAMECLPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCL 1438
Query: 540 TPEDARKLNL-------PPECVNK--------TPSGETFVKSNLQKGILPEILEELLAAR 584
A K N P + V + TP+G FV S +++GILP +LEE+L R
Sbjct: 1439 GKVVASKANTLGVSSFSPEQHVLQDLKDQILLTPNGVMFVPSKVRRGILPRLLEEILTTR 1498
Query: 585 KRAKADLKEAKDPLE--KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
K +K+ P + + + + RQLALK+ AN YG+T A G++PC E++ S+ G
Sbjct: 1499 IMVKQAIKKLAPPEKVLQRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG 1558
Query: 642 RQMIEHTKKLV--EDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
R +E V +K+ NA+VIYGDTDS+ V TV+ + ++G E A I
Sbjct: 1559 RSTLEKAISFVNLHEKW--------NAKVIYGDTDSMFVLLRGCTVKESFQIGSEIASAI 1610
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKN 758
+ P+ L+ EKVY+P L++KKRY G + +P++ + + D KGIETVRRD C V
Sbjct: 1611 TAMNPSPVTLKMEKVYHPCFLLTKKRYVGYSYESPDQIEPVFDAKGIETVRRDTCGAVAK 1670
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL---TKTGDDYEVKAA 815
++ + L +++ Y+ +L R+ L + K + T + + A
Sbjct: 1671 IMEQSLRLFFEHQNLLEVKTYLHRQWKRILSGRICLKDFIFAKEVRLGTYSARISSLPPA 1730
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP--IDTHYY 873
+ +A + D P +R+PYV+I GA+ + DP+ VL + P I+ YY
Sbjct: 1731 AI-VATKAMTVDPRAEPRYAERIPYVVIHGEPGARLVDMVVDPLEVLAIDSPFRINDLYY 1789
Query: 874 LENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLS--CIG 928
+ QI L R+F + L + E+ S + +N + LS C+
Sbjct: 1790 INKQIIPALQRVFGLVGADLNHWFSEMPRPTREASAKHTLTTNFHQTRIDYYYLSKHCVL 1849
Query: 929 CKALI-SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGS---LHQDVLC 984
C L+ ++ LC+ C E +S+ +LE L C C G L V C
Sbjct: 1850 CDRLVQASARLCNQCSENEVAAATAVISKTSKLEQEMQHLVAVCHHCGGGDRLLENGVKC 1909
Query: 985 TSRDCPIFYRRKKAQKDMAEA 1005
TS C +FY R+K QK++ A
Sbjct: 1910 TSISCLVFYERRKVQKELLAA 1930
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 35/149 (23%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+IR++G T G C +H R++ +S+ Q
Sbjct: 46 VIRVYGPTPAGQKTCLHIH----------------------------RLKGNAGSSR--Q 75
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V +V+ R Y + + F+KI + P V+ +L G LD KS YE
Sbjct: 76 HVHGCSLVRARKFYGYHSLE-ELFVKIYLYYPQDVSRAANLLLAGAVLD----KSLQPYE 130
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
S++ F L+F++D N+ G + + K+R
Sbjct: 131 SHIPFILQFLVDYNLYGMGHLHLSKMKFR 159
>gi|449497906|ref|XP_002191467.2| PREDICTED: DNA polymerase zeta catalytic subunit [Taeniopygia
guttata]
Length = 3147
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 200/599 (33%), Positives = 306/599 (51%), Gaps = 62/599 (10%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGSEQGTYEGATVLEA 506
EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q + ++E
Sbjct: 2559 EMARLFGIQFLHVLTRGSQYRVESVMLRIAKPMNYIAVTPSVQQRAQMKAPQCVPLIMEP 2618
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT------PEDARK-----LNLPPEC-- 553
+ FY + LDF SLYPSI++AYN C+ST + DA K L +PP+
Sbjct: 2619 ESRFYSNAVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDAFKFGCTSLRVPPDLLY 2678
Query: 554 -----VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAV---LDG 605
+ +PSG FVK +++KG+LP +LEE+L R K +K K +KAV L+
Sbjct: 2679 QIRHDITVSPSGVAFVKPSVRKGVLPRMLEEILKTRIMVKQSMKAYKH--DKAVTRMLEA 2736
Query: 606 RQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEH 664
RQL LK AN +G+T A G++PC EI S+ R+ +E KLV D T G
Sbjct: 2737 RQLGLKYIANFTFGYTAANFSGRMPCTEIGDSIVHKARETLERAIKLVND--TKKWG--- 2791
Query: 665 NAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKK 724
A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEKVY P +L +KK
Sbjct: 2792 -AHVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLPCVLQTKK 2850
Query: 725 RYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD-RDIPGAVQYVKS 782
RY G +Y T +K D KGIETVRRD+C V ++ EC K+L + RDI QYV++
Sbjct: 2851 RYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKIL-ECSIKLLFETRDISQIKQYVQN 2909
Query: 783 TISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAATAPNVGDRVPY 840
LL + + + K + Y+ A +E+ RM D + P VG+RVPY
Sbjct: 2910 QCMKLLEGKASMQDFIFAKEY-RGSSAYKPGACVPALEITRRMLAYDRRSEPRVGERVPY 2968
Query: 841 VIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFE------------ 887
VI+ G + P+ VL++ ++ ++ YY+ QI PL R+F
Sbjct: 2969 VIVYGTPGLPLIQLVRRPLEVLQDPSLRLNATYYITKQILPPLARVFSLIGIDVFSWYHE 3028
Query: 888 -PILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGRE 946
P ++ A+ + R +IS + L C C L G +C+ C+ +
Sbjct: 3029 LPRIQKAASAARTELEGRKGTISQYFTT---------LHCPVCDELTQYG-ICNKCRSQP 3078
Query: 947 AELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3079 QHVAVILNQEIRELERKQEQLVQICRNCTGCFDRQIQCVSLNCPVLFKLSRVSRELSKA 3137
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Query: 128 EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQFVRHI 183
+ C +HG PY Y+ G G + Q+ R N S Q V +
Sbjct: 31 KSQKTCLHLHGIFPYLYVPY-DGFGQHPECYLRQVAFSIDRALNVALGNPSSTVQHVFKV 89
Query: 184 EMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLF 243
+V Y +++ Q F+KI + P MV +L G ++ KS+ +E+++ +
Sbjct: 90 SLVSGMPFYGYHEKERQ-FMKIYLYNPAMVKRVCELLQGGAIMN----KSYQPHEAHIPY 144
Query: 244 ALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
L+ ID N+ G N I + K+RK +
Sbjct: 145 LLQLFIDYNLYGMNLINLAAVKFRKARR 172
>gi|1706511|sp|P52342.1|DPOL_HHV7J RecName: Full=DNA polymerase
gi|1139640|gb|AAC54700.1| DNA polymerase [Human herpesvirus 7]
Length = 1012
Score = 279 bits (713), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 187/542 (34%), Positives = 284/542 (52%), Gaps = 61/542 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
EKE++ + I ++ R + YC++D+ L +L K+ + + E+A + + I
Sbjct: 449 EKENLSYKEIPKKFIDGSKGRAVVGRYCIQDSLLVVQLFTKINYHYEMAEVASLAYITIR 508
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK---QAGSEQGTYEGATVLEARAGFYEKPIA 516
+ GQ K+ +L +AK N+++P++ G E Y+GATVLE + G+Y P
Sbjct: 509 CAVFEGQQKKIFPCILHEAKNLNMILPSMNTNFNKGKENVGYKGATVLEPKIGYYATPTV 568
Query: 517 TLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPE---CVNKTPSGETFVKSNLQKGIL 573
DF SLYPSIMMA+NLCYSTLV E+A + L + V+ P FVK +++ IL
Sbjct: 569 VFDFQSLYPSIMMAHNLCYSTLVVDENAV-IGLHADDILTVHVGPVTHRFVKKTVRESIL 627
Query: 574 PEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEI 633
+L++ L RK K +K +P+ + +LD +QLALK + NSVYG TGAT LPC+ I
Sbjct: 628 ASLLKKWLDKRKEVKMQMKMCNNPVMEMLLDKKQLALKTTCNSVYGVTGATHSLLPCVAI 687
Query: 634 SSSVTSYGRQMIEHTKKLVE----------DKF-TTVGGYE--HNAEVIYGDTDSVMVQF 680
++SVT GR+M+ T V+ +KF T G + EVIYGDTDS+ V F
Sbjct: 688 AASVTCLGREMLCKTVDYVDSAMYSDTFFIEKFGLTRGDFSGTFGIEVIYGDTDSLFVTF 747
Query: 681 GVPTVEAAMKLGREAADYISGTFIK-PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD- 738
+A ++ A +I+ T K PIKLEFEK+ +P +LI KKRY G K D
Sbjct: 748 KNVCPKALKRIAPSIASHITNTLFKHPIKLEFEKILFPLILICKKRYIG-------KLDD 800
Query: 739 -KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD--------------------IPGAV 777
+ KG+E VR+ +C VK +V + + + D D +P +
Sbjct: 801 ATLVFKGVELVRKTSCDFVKVVVKDIIDLLFWDVDVQKSAEKLSNMTIQEIYENGVPDGI 860
Query: 778 QYVKSTISD----LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAP 832
Q + + D L +NR+++ LV++ L+K Y + H+ + +R+ +R P
Sbjct: 861 QKIIKKLCDARDALFLNRVNIKSLVLSSVLSKDISAYKQANLPHLAVVKRLAQRKEE-LP 919
Query: 833 NVGDRVPYVIIKAAKGAKA----YERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEP 888
N+GDRV Y++I + K YE +EDP Y +ENN+ I+ Y E QI K + P
Sbjct: 920 NIGDRVMYILIAPTETVKKTFHNYELAEDPAYAIENNLKINADKYFE-QIMKAVTNAISP 978
Query: 889 IL 890
I
Sbjct: 979 IF 980
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 140/329 (42%), Gaps = 36/329 (10%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
K R PL +S++F I+ + ++P S +I++FG T G VC
Sbjct: 75 KELRAPLKFHIYDASESLLFTD-SIENIPFQYRHFVIP----SGNVIKLFGKTECGKKVC 129
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRH-IEMVQKRSIM 192
V G YFY C + L R+ +S++ IE V K +
Sbjct: 130 INVFGQNSYFY--CEYQCKKE--------LNSRICSLLNSSEIKMSCSFSIESVTKYNFY 179
Query: 193 YYQQQKSQPFLKIVVALPTMVASCRG---ILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
Y + + K+ + S R +L+ G+ + YE+ V RF I
Sbjct: 180 GYNTEPIKNLFKL--SFSNFYISNRIGKILLNEGVSV----------YEAEVEILNRFFI 227
Query: 250 DCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
D N+ W ++ ++ AK+ S ++E +C SD+ + + SFDI
Sbjct: 228 DNNLKSFGWYQINYLSIQEFAKS-SNVEIELNCHVSDLFLLKEDS----WPLYDCCSFDI 282
Query: 310 ECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
EC + G+FP+ + +++ E +++ TL +C I GV + F +E ++
Sbjct: 283 ECLSQNGNFPDAEQMVTSSLISVIDFDSEGNYQSKHLFTLGTCEQIEGVFIYEFASEFEL 342
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYL 398
L A+ F++ P+++ GYNI FDL YL
Sbjct: 343 LYAFFLFLKCKSPEILTGYNIINFDLKYL 371
>gi|432945567|ref|XP_004083662.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Oryzias
latipes]
Length = 2967
Score = 279 bits (713), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 205/645 (31%), Positives = 311/645 (48%), Gaps = 65/645 (10%)
Query: 406 HSIISDLQNGNAETRRRLAVYCLKDAYLPQ-----RLLDKLMFIFNYVEMARVTGVPISF 460
H +SD + N R + + D Y+ + LL + + E+AR+ G+
Sbjct: 2333 HRTLSDWFDHNTNLYR----WKMVDHYVSRVCSSMHLLQQNDIVGRTSELARLFGIQFLH 2388
Query: 461 LLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATL 518
+L+RG +V S +LR AK N V P+V+Q ++ V+E + FY + L
Sbjct: 2389 VLTRGSQYRVESMMLRVAKPLNYIPVTPSVQQRAQQRAPQCIPLVMEPESRFYSNSVLVL 2448
Query: 519 DFASLYPSIMMAYNLCYST-------LVTPEDAR----KLNLPPEC-------VNKTPSG 560
DF SLYPSI++AYN C+ST L TP++ + L +PPE +N +PSG
Sbjct: 2449 DFQSLYPSIVIAYNYCFSTCLGHQESLGTPDEFKFGCTSLRVPPEMLYQLRNDINVSPSG 2508
Query: 561 ETFVKSNLQKGILPEILEELLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYG 619
FVKS ++KG+LP +LEE+L R K +K K D +LD RQL LK+ AN +G
Sbjct: 2509 IAFVKSTVRKGVLPRMLEEILNTRIMVKQSMKTYKQDKALMKLLDARQLGLKLIANVTFG 2568
Query: 620 FTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMV 678
+T A G++P +E+ S+ R+ +E K V D + A V+YGDTDS+ V
Sbjct: 2569 YTSANYSGRMPSVEVGDSIVHKARETLERAIKQVNDT------KKWGARVVYGDTDSMFV 2622
Query: 679 QFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKF 737
T E A ++G E A+ ++ T KP+KL+FEKVY P +L +KKRY G +Y + +K
Sbjct: 2623 LLKGATKEQAFRIGNEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYESLDQKE 2682
Query: 738 DKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLL 797
D KGIETVRRD C V ++ + + RDI Q+V+ +L R + L
Sbjct: 2683 PVFDAKGIETVRRDGCPAVSKILERSIKLLFETRDISQVKQFVQCQCLKVLDGRASMQDL 2742
Query: 798 VITKGLTKTGDDYEVKA--AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERS 855
K +G Y A +EL RM D P VG+RVPYV++ G +
Sbjct: 2743 TFAKEYRGSG-SYRPGACVPALELTRRMLSYDRRLEPRVGERVPYVVVYGTPGVPLIQLV 2801
Query: 856 EDPIYVLEN-NIPIDTHYYLENQISKPLLRIFE-------------PILKNAS-KELLSG 900
P+ VL++ + ++ YY+ QI PL R+F+ P ++ AS +G
Sbjct: 2802 RRPLDVLQDPTLRLNATYYITKQILPPLARMFQLIGVDVFSWYQELPRVQKASCSAAAAG 2861
Query: 901 DHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQEL 960
D G + L C C L G +CS C+ + +++
Sbjct: 2862 DEV--------GRKGTISQYFTTLHCPVCDELTQLG-VCSQCRAEPQRVAVTLYQDMRQW 2912
Query: 961 EVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
E +L C+ C G + V C S DCP+ Y+ + + +++A
Sbjct: 2913 ESQQEQLLKICRSCSGGTERQVPCISLDCPVLYKLSRVNRQISKA 2957
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP- 177
++RIFG T G C +HG PY Y+ G G H Q+ R N P
Sbjct: 37 VVRIFGATPAGQKTCLHLHGIFPYIYVPY-DGCGQPPERHLRQVAFSIDRALNVAMGNPA 95
Query: 178 QFVRHIEMVQKRSIM--YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
V+H+ V S M Y K + F+KI + P MV +L G ++ KS+
Sbjct: 96 SSVQHVFKVVLVSGMPFYGFHAKEKHFMKIYLYNPQMVKRVCELLQSGAVMN----KSYQ 151
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT 269
+E ++ + L+ ID N+ G N I + K+R++
Sbjct: 152 PHEGHIPYLLQLFIDYNLYGMNLINLAAVKFRRS 185
>gi|159115336|ref|XP_001707891.1| DNA polymerase delta, catalytic subunit [Giardia lamblia ATCC 50803]
gi|157435999|gb|EDO80217.1| DNA polymerase delta, catalytic subunit [Giardia lamblia ATCC 50803]
Length = 1329
Score = 278 bits (712), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 161/397 (40%), Positives = 216/397 (54%), Gaps = 50/397 (12%)
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISK 723
H++ VIYGDTDSVMV+FGV + AM L + A+ Y++ +FI+PI LEFEKVY PYLL++K
Sbjct: 925 HDSVVIYGDTDSVMVKFGVDNLMEAMMLAKYASTYVTQSFIRPINLEFEKVYCPYLLLNK 984
Query: 724 KRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKST 783
KRYAG YWTNP K DK+D+KG+E VRRDNC LV ++ + L + D A+ YVKS
Sbjct: 985 KRYAGQYWTNPFKPDKIDSKGLELVRRDNCRLVVIVMEKILDVLFNYSDPQKAISYVKSV 1044
Query: 784 ISDLLMNRMDLSLLVITKGLTKTGDDYEVK-AAHVELAERMRKRDAATAPNVGDRVPYVI 842
+ DL+ R+DLSLLVI+K LT++ Y K HV LA RM +RD TAP VGDRVPYV+
Sbjct: 1045 VHDLISQRIDLSLLVISKALTQSVSSYTNKQQTHVNLAMRMMERDPMTAPKVGDRVPYVV 1104
Query: 843 IKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILK-----NASKEL 897
K K YERSEDP Y + NN+PIDT YYL Q+ KP+ R+ + +LK A+ +L
Sbjct: 1105 TLKDKACKLYERSEDPAYAISNNLPIDTDYYLHQQLEKPVCRLLKDVLKCSSEAEAADQL 1164
Query: 898 LSGDHTRSISI---------------------------STPSNSGIMKF--AKRQLSCIG 928
G H SI P +GIM K+ C+
Sbjct: 1165 FKGKHCVGPSIVFSRGDVGSSMGKPDTSGGSSKSAKATKMPKQTGIMGMIAGKKVAKCMY 1224
Query: 929 CKALISNG------TLCSHC-KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD 981
C I++G LC C LY + ++ E + + +C C G +
Sbjct: 1225 CNVRITDGKLYEDVMLCKPCLLVNRLSLYSRLQRELLLAEHRYRTVAVECMFCTGEISSH 1284
Query: 982 --------VLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
+ C+S DC +FY R K + D + + D
Sbjct: 1285 TGDIEDGLIPCSSSDCELFYARIKTRLDYKALRAKFD 1321
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 29/309 (9%)
Query: 122 IFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVR 181
+FG+TREG SV V GF+ Y Y+ G D + + LE ++ ++ V +
Sbjct: 88 LFGITREGQSVSTVVTGFKHYLYV------GTDTFLNLSE-LELKL-SSHLGFDVLGYTP 139
Query: 182 HIEMVQK----RSIMYYQQQKSQPFLKIVVALPTMVASCRGI-LDRGIQLDGLGMKS--F 234
+VQ RSI ++ QK + KI A ++ ++ RG LD I G+++ F
Sbjct: 140 ITSIVQMPSTYRSIYVFRIQKKHIY-KISFADKSLYSAIRGFFLDSNIYNGRYGLRANKF 198
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR-------KTAKTLSYCQLEFDCLYSDI 287
YE+++ +RFM+D + G W+ +P Y K +T QL+ + YS +
Sbjct: 199 ELYEADLDPTVRFMVDTQLRGFAWVRIPKDAYSPLPSDAPKPLQTTMQIQLQTE--YSSL 256
Query: 288 IS-RHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVAN---LVTLQGEKQPFI 343
++ + + ++ AP R+LSFDIE +G FP+ D +I + + ++T P
Sbjct: 257 VALDYNDPLYAVNAPIRVLSFDIESVSLQGGFPDAASDYIITICSSLYILTQSTADAPHA 316
Query: 344 RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
+ LKSCAPIVG DV FETE+++LLA+ I+ DPD+ GYNI FD Y+ ++ +
Sbjct: 317 NVALVLKSCAPIVGADVFCFETEQELLLAFNYLIQLFDPDLFTGYNIDGFDFSYIFKRAE 376
Query: 404 VHHSIISDL 412
V ++ L
Sbjct: 377 VSQVLVQSL 385
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 100/151 (66%), Gaps = 10/151 (6%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+DVH+S+I+ L + RRR+ +YC+KD LP +L++KLM + N +E+ RV+G+ S
Sbjct: 474 QKDDVHYSMITPLFMQDEYGRRRITLYCIKDCKLPLKLMEKLMILVNTIELCRVSGLCGS 533
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIP--------NVKQAGSEQGTYEGATVLEARAGFY 511
LL GQ I++LS L R + ++ +IP + + EGATVL + GFY
Sbjct: 534 LLLYSGQQIRILSLLYRFSAAESYLIPYRIRTGGGYTGGFSGDSESLEGATVLNPKRGFY 593
Query: 512 --EKPIATLDFASLYPSIMMAYNLCYSTLVT 540
++PIATLDF SLYP+I++A+NLCYST+++
Sbjct: 594 SDKQPIATLDFNSLYPTIIIAHNLCYSTMIS 624
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 84/111 (75%), Gaps = 1/111 (0%)
Query: 547 LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGR 606
L+ E + TP F+K + GILP+IL+ LL ARKRAK D+K+A DPL K VL+GR
Sbjct: 706 LSTSNELITVTPIKARFLKKTVFPGILPKILQVLLDARKRAKQDMKKAVDPLAKDVLNGR 765
Query: 607 QLALKISANSVYGFTGA-TVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKF 656
QLALK+ ANS+YGFTGA + G+LP EISSS+T++GR+MI HTK +VE++F
Sbjct: 766 QLALKLIANSLYGFTGALSFGKLPSQEISSSITAFGREMINHTKNVVEERF 816
>gi|343963255|gb|AEM72550.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 278 bits (712), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 273/527 (51%), Gaps = 56/527 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + E R + YC+ D+ L +L KL+F + +AR++ + ++
Sbjct: 494 KKHSVPYKQIPVLFRRDDEGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMN 553
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L A+++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 554 KVIFDGQQSRIFTCMLAAARREGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 611
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T D L + T +G FVK +++K IL ++L
Sbjct: 612 FASLYPSIIQAYNLCYCTLITDNDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLL 671
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KDPL + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 672 TSWLAERKAVREKLKHCKDPLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 731
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V +V+YGDTDSV V
Sbjct: 732 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVLLC- 790
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 791 -GIEDADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 845
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 846 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 905
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPN 833
L NR+D+ L ++ LT+ D Y + H+ + + +R PN
Sbjct: 906 KLVALITDARERLYENRVDIHELQLSATLTQACDKYKQQNLPHLTVVRKKLERREEI-PN 964
Query: 834 VGDRVPYVIIKAAKGAKA-YERSEDPIYVLENNIPIDTHYYLENQIS 879
GDR+ YV++ A Y +EDP YV + + I+ Y N IS
Sbjct: 965 TGDRIFYVLLAHPDERVANYVIAEDPDYVETHRLQINCSKYFSNLIS 1011
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 153/340 (45%), Gaps = 39/340 (11%)
Query: 100 YVIGDSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPD 154
+ D + E LP S + AII + G T +G VC VHG YFY++
Sbjct: 135 FCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATR 194
Query: 155 DISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM-V 213
D +++ +E++ S V ++ V K S+M + S P+L + + +
Sbjct: 195 DA--VSKVMSNLEKESSSCSYV------VKPVNKMSLMGFNTNTS-PYLMMSFSNHFVGK 245
Query: 214 ASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL 273
+ R + D LD F +E V RF++D W + R+T+K
Sbjct: 246 EAARNLKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD- 294
Query: 274 SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQV 329
S C+LE DC D+ E+ ++ ++FDIEC FP+ T+ D +IQ+
Sbjct: 295 SNCELELDCCVGDLQVLRDRVEWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQI 351
Query: 330 ANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYN 389
+ V + +++ TL SCA I GV + +E +++ ++ F+R P+ + GYN
Sbjct: 352 S-CVCFDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYN 410
Query: 390 ICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
I FD+PY+I + + ++Q G +R + C K
Sbjct: 411 INAFDIPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 445
>gi|224123192|ref|XP_002319017.1| predicted protein [Populus trichocarpa]
gi|222857393|gb|EEE94940.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 196/631 (31%), Positives = 306/631 (48%), Gaps = 54/631 (8%)
Query: 414 NGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQ 473
+G R R Y + A L ++++L I E+ARV G+ +LSRG +V S
Sbjct: 121 SGPGRARYRCIEYMIDRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESM 180
Query: 474 LLRKAKQKNL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAY 531
LR A +N + P +Q S+ V+E +GFY P+ LDF SLYPS+++AY
Sbjct: 181 FLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMIIAY 240
Query: 532 NLCYSTL---VTPEDARKLNLP-----PECVNK-------TPSGETFVKSNLQKGILPEI 576
NLC+ T V P A L + P + TP+G +V S ++KG+LP +
Sbjct: 241 NLCFCTCLGNVAPSKANTLGVSSFSTDPSVLRDLKDKILLTPNGTMYVPSEIRKGVLPRL 300
Query: 577 LEELLAAR---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIE 632
LEE+L+ R K+A L ++ L + + + RQLALK+ AN YG+T A G++PC E
Sbjct: 301 LEEILSTRIMLKQAMKKLAPSQQVLHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAE 359
Query: 633 ISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLG 692
++ S+ GR +E LV + A+VIYGDTDS+ V +V+ + ++G
Sbjct: 360 LADSIVQCGRSTLEKAISLVN------ANEKWKAKVIYGDTDSMFVLLKGRSVKESFQIG 413
Query: 693 REAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRD 751
RE A ++ P+ L+ EKVY+P L++KKRY G + + ++ + M D KGIETVRRD
Sbjct: 414 REIASAVTAINPDPVTLKLEKVYHPCFLLTKKRYVGYSYESADQIEPMFDAKGIETVRRD 473
Query: 752 NCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTG 807
C V ++ + L DI Y++ + +L R+ L V K G T
Sbjct: 474 TCGAVAKIMEQSLRIFFEHEDISEVKTYLQRQWTRILSGRVSLQDFVFAKEVRLGTYSTR 533
Query: 808 DDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP 867
+ A + + MR D P +RVPYV+I GA+ + DP+ +L + P
Sbjct: 534 ASAALPPAAIVATKAMRT-DPRAEPCYAERVPYVVIHGEPGARLVDMVVDPLDLLAIDSP 592
Query: 868 --IDTHYYLENQISKPLLRIFEPI----------LKNASKELLSGDHTRSISISTPSNSG 915
++ YY+ QI L R+F + + ++E LS R P +
Sbjct: 593 FRLNDVYYITKQIIPALQRVFGLLGADLNQWFSEMPRPAREALS---KRPSYAPNPQRTR 649
Query: 916 IMKFAKRQLSCIGCKALI-SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQEC 974
I + + C+ C L+ ++ +C+ C RE + + +LE L C+ C
Sbjct: 650 IDYYYLSK-HCVLCGELVQASAHICNKCSQREIAAATAVIGRTSKLEKEMQHLAAICRHC 708
Query: 975 QGS---LHQDVLCTSRDCPIFYRRKKAQKDM 1002
G L + CTS C +FY R+K Q+++
Sbjct: 709 GGGDWLLESGIKCTSLACSVFYERRKVQREL 739
>gi|448936384|gb|AGE59932.1| DNA polymerase [Acanthocystis turfacea Chlorella virus TN603.4.2]
Length = 902
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 181/512 (35%), Positives = 290/512 (56%), Gaps = 25/512 (4%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + GNAE R +A Y +D LP +LL KL + EMA +P+
Sbjct: 359 QKDDLPAMQIFEKFEGNAEDRAVIAKYAAQDTLLPLKLLSKLAIFEDVAEMANAVKIPMD 418
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ IP+ K A +G +EGATVLE + G Y +PIA LD
Sbjct: 419 WVGFRGQQVRAFSCLFGKAREMGYAIPDNK-AWPAEGKFEGATVLEPKKGAYFEPIAALD 477
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ T+V + + N+P + +G F S +G++P +L+
Sbjct: 478 FASLYPSIIRAHNMSPETIVM--EPKFANVPGVEYYEIQTGIGKFRYSQKSQGVVPALLD 535
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + +A D ++A+ D Q + K+ NSVYGF GA+ G +PC+ I++
Sbjct: 536 DLAKFRKNAKKMMAQAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFIPCVPIAA 595
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR-- 693
SVT+ GR MI+ + + + V+YGDTDS+MV+ +P + +
Sbjct: 596 SVTATGRNMIDVAARRALELLP-------GSVVVYGDTDSIMVKMKLPKGKDQNNINDHF 648
Query: 694 EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
E A +++G K P LEFEK+YYPY+L SKKRYA + + +P + K+D KG+ VR
Sbjct: 649 EVAKWLAGEITKEYKAPNDLEFEKIYYPYILYSKKRYAAIKFEDPNEKGKVDVKGLALVR 708
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD + ++++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 709 RDFSPITRDILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGYK 767
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAK--GAKAYERSEDPIYVLENNIP 867
E++ H+ +A ++ +R P+ G RVP+V ++ K R+EDP + N +
Sbjct: 768 NEMQ-PHLIVANKILERTGVPVPS-GARVPFVYVEDDDKIDLKQSMRAEDPTFAKNNGLV 825
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+++Q+ KPL+ +F+P++++ KEL
Sbjct: 826 VDRLFYIDHQLLKPLVSLFDPLVEDPEKELFG 857
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 132/305 (43%), Gaps = 41/305 (13%)
Query: 98 IDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS 157
+D+ GD N + I +FG T +G S C ++ F P F + P
Sbjct: 6 VDWRSGDENGQFK---------ITMFGKTVDGKSACVRIR-FTPSFLLEMPDSWSAPRQR 55
Query: 158 HFHQILEGRMR-EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC 216
F I E M+ A ++ +P VQ++S+ + K + + A PTM A
Sbjct: 56 LF--ITETVMKYGAIKDMCLP--------VQRKSLWGFDNGKIRNMAQF--AFPTMEAMR 103
Query: 217 RGILDRGIQLDGLGMK-SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSY 275
+ G+K + YESNV +R + W+ V + +S
Sbjct: 104 KA---------KYGLKGNHQVYESNVDPVIRLFHLRKLSPSGWVRV--SQSYPAMTRVSR 152
Query: 276 CQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLV 333
C +E +C ++ + + P I S+DIE R+ FP ++ D V Q+A
Sbjct: 153 CDIEAECNFTQV----GPSDVVTTPPLVIASWDIETYSRERKFPLASNPDDYVTQIATSF 208
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
GE +PF R V L A + GVD++S E DV+ AW D I + DV+IGYN+ ++
Sbjct: 209 QRYGESEPFKRVVFCLNDTADVPGVDIVSCSQEADVINAWMDEITKEKTDVLIGYNVFQY 268
Query: 394 DLPYL 398
D Y+
Sbjct: 269 DWKYI 273
>gi|336476181|ref|YP_004615322.1| DNA polymerase Pol2 [Methanosalsum zhilinae DSM 4017]
gi|335929562|gb|AEH60103.1| DNA polymerase Pol2 [Methanosalsum zhilinae DSM 4017]
Length = 905
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 266/888 (29%), Positives = 411/888 (46%), Gaps = 138/888 (15%)
Query: 93 FQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMG 152
FQ LD DY+ D+ + IIR+FG +G S+CC V GFEPYFY
Sbjct: 3 FQLLDADYIRKDN-----------SPIIRLFGRGDDGRSICCLVPGFEPYFYAR------ 45
Query: 153 PDDISHFHQILEGRMREANRNS-KVPQFVRHIEMV--QKR-----SIMYYQQQKSQPFLK 204
P ++ +++ R E N NS K + V E V QK I+ Y Q
Sbjct: 46 PSTVNSHDELI--RALEQNFNSIKRVELVEKFEPVGYQKSRKKMLKIVTYDPQNVPEIRD 103
Query: 205 IVVALP--------TMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCN-IVG 255
VV+ P ++ R ++D+GI GMK S+ + +DC+ +V
Sbjct: 104 DVVSFPGIEEVYETDILFRNRYLVDQGIH----GMKWVHADTSS---DIDHSMDCDELVT 156
Query: 256 GNWIEVPVGKYRKTAKTLSYCQLEFDCLYSD------------IISRHPEGEFSKMAPFR 303
IE R + L + + +CL + +IS E EF M
Sbjct: 157 STRIE---EVDRIDSAPLRHFAFDIECLPINGGMPVPEQSPVIMISLSFEPEFRGMKSIV 213
Query: 304 ILSFDIECAGRKGHF--PEPT-----------HDPVIQVANLVTLQGEKQPFIRN-VMTL 349
+L ++ AG EP +DP V + P+I + + TL
Sbjct: 214 LLGRSLDDAGDGVEVLGDEPALLNRFFEIFREYDP--DVVTGYNINDFDIPYIVDRIKTL 271
Query: 350 KSCAPIVG---------VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL-- 398
+S + +D V + R + + P + +++ +++L +
Sbjct: 272 QSSGITINSACGRDGRPLDYRKIGIRSMVSITGR-IVADSLPIIRQQFSLKRYNLQTVSR 330
Query: 399 ----IEKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVT 454
+EK DV + + + E R+ Y +D+ L LL KL + +V +A+++
Sbjct: 331 ELLDMEKLDVSPQQMEEYWLDSGEKIRKFIDYARRDSELAMELLLKLRLLDKFVALAQIS 390
Query: 455 GVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPN------VKQAGSEQGTYEGATVLEARA 508
G +L GQ+ V + LLR+ ++ + V+P V E +G VLE +
Sbjct: 391 GSLPQEILEGGQTSMVENLLLREFRKHDYVLPPRPDENIVSSRNRESEGLKGGEVLEPKK 450
Query: 509 GFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNL 568
G EK + LD+ SLYP+IMMA+NLCY+T++ E P + K PSG FV + +
Sbjct: 451 GLLEK-VVILDYKSLYPTIMMAHNLCYTTVIDIE------RPDGNIIKPPSGGEFVSAEV 503
Query: 569 QKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQL 628
+GI+P ILE LL R K +K AK E V D QLALKI NS YG++G T +L
Sbjct: 504 FRGIVPSILENLLNRRTETKGLMKGAKTEDEYRVYDATQLALKILLNSFYGYSGYTRARL 563
Query: 629 PCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNA------------------EVIY 670
+ ++++VTS+GR+ I T+ +VE + TV E A V+Y
Sbjct: 564 YSLALANAVTSFGRENILKTRSVVEKEIETVILREGKAYLKEEVTSKDTDDVIVKLSVVY 623
Query: 671 GDTDSVMVQFGVPT---VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYA 727
GDTDSV VQ T +E +G A +S + P++LEFE + L I+KKRYA
Sbjct: 624 GDTDSVFVQCSSETNLELEDVELVGNRIAGIVSHSLPDPMELEFESIAERALFIAKKRYA 683
Query: 728 GLYW----TNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKST 783
W + E + + KG+ETVRRD C L + L IL + D+ A++YV+
Sbjct: 684 --LWMFERSGTEWSESIKVKGMETVRRDWCELTSRTLNSVLELILKEGDVEKAMEYVRGV 741
Query: 784 IS-----DLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRV 838
+ D+ + + LV+T+ +K+ Y+ K H+ + E+M+KR A AP++G+R+
Sbjct: 742 VDRVRNIDVANDPEIIDDLVLTRMYSKSMGSYKNKQPHLTVIEKMKKRTGA-APSIGERI 800
Query: 839 PYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIF 886
P+VI+ A R+EDP YV +NNI +D YY++ QI P+ RI
Sbjct: 801 PFVIV--AGKDLFVNRAEDPDYVRQNNISLDVDYYIKKQILPPVSRIL 846
>gi|196017075|ref|XP_002118384.1| hypothetical protein TRIADDRAFT_34116 [Trichoplax adhaerens]
gi|190579014|gb|EDV19123.1| hypothetical protein TRIADDRAFT_34116 [Trichoplax adhaerens]
Length = 740
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 208/676 (30%), Positives = 334/676 (49%), Gaps = 46/676 (6%)
Query: 363 FETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRR 422
F R +L WR EV ++ N+ +++ + H+S + + N ++ R
Sbjct: 64 FVIGRILLNVWRIVRSEVTLNIYTFENVSY----HVLHQRVPHYSFETLTEYFNQDSHRW 119
Query: 423 LAV-YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
+ Y L LL++L + E AR+ G+P +LSRG +V S +LR AK
Sbjct: 120 KTIEYYLMRCRSNFLLLNELDTVGLTSEFARLFGIPFYSVLSRGSQFRVESMMLRIAKPM 179
Query: 482 NL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-- 537
N V P+ Q + + +LE + FY P+ LDF SLYPSI++AYN C+ST
Sbjct: 180 NYIAVSPSPDQRAMMRAPEVISLILEPESRFYSDPVVVLDFQSLYPSIIIAYNYCFSTCL 239
Query: 538 -----LVTPEDAR----KLNLPPECVNK-------TPSGETFVKSNLQKGILPEILEELL 581
++T E + L +P + K +P+G FVKSN++KG+LP +LEE+L
Sbjct: 240 GNVKNIITDESRQFGCTTLRVPLATMKKIKEDYTVSPTGLAFVKSNIRKGVLPRMLEEIL 299
Query: 582 AARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTS 639
R K +K+ K D + +L+ RQL LK+ +N YG+T A G++PC+EI S+ +
Sbjct: 300 NTRVMVKGAMKKNKGDKALERLLNARQLGLKLISNVTYGYTSANFSGRMPCVEIGDSIVA 359
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
R+ + LVE+ E A+V+YGDTDS+ + T + A ++GRE +
Sbjct: 360 KARETLTRAIHLVENT------PEWKAKVVYGDTDSMFILLEGATKDEAFRIGREITKRV 413
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKN 758
+ P+KL+FEKVY P +L +KKRY G + ++F+ + D KGIETVRRD C V
Sbjct: 414 TELNPVPVKLKFEKVYLPCVLQTKKRYVGFAYEKEDQFEPIYDAKGIETVRRDGCPAVAK 473
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--H 816
++ + + + + RD+ ++V L+ + VI K + Y+ A
Sbjct: 474 ILEKSIKMLFMQRDVSLIKKFVLRQCQKLIDGKASTKDFVIAKEY-RGRSSYKPGACVPS 532
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLE 875
+E+++++ D P VG+RVPYV++ G PI L + ++ ++ YY+
Sbjct: 533 LEISKKLLATDKRAEPRVGERVPYVVVYGMPGLPLIRLVRRPIEFLSDPSLRLNAAYYIT 592
Query: 876 NQISKPLLRIFEPIL--KNASKELLSGDHTRSISISTPSNSGIMKFAKRQ----LSCIGC 929
QI PL RIF I NA L RS + SN I K Q L C C
Sbjct: 593 KQILPPLNRIFSLIGVDTNAWYNELPRS-LRSAAFVPQSNDLIQKATISQYFNSLRCPIC 651
Query: 930 KALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
+ +++N +C C+ + +++ +E ++ C +C G DV C S DC
Sbjct: 652 E-IVTNHGICCKCQSDPQKAILLIQDRLRLMERAHCKMKELCYQCIGVRLCDVQCESLDC 710
Query: 990 PIFYRRKKAQKDMAEA 1005
PI ++ KA+ ++ +A
Sbjct: 711 PILFKVLKAKHELVQA 726
>gi|343963249|gb|AEM72546.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 274/527 (51%), Gaps = 56/527 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + + R + YC+ D+ L +L KL+F + +AR++ + ++
Sbjct: 494 KKHSVPYKQIPVLFRRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMN 553
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L A+++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 554 KVIFDGQQSRIFTCMLAAARREGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 611
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T D L + T +G FVK +++K IL ++L
Sbjct: 612 FASLYPSIIQAYNLCYCTLITDNDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLL 671
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KDPL + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 672 TSWLAERKAVREKLKHCKDPLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 731
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V +V+YGDTDSV V
Sbjct: 732 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVLLC- 790
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 791 -GIEDADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 845
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 846 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 905
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDYEVKA-AHVELAERMRKRDAATAPN 833
L NR+D+ L ++ LT+ D Y+ + H+ + + +R PN
Sbjct: 906 KLVALITDARERLYENRVDIHELQLSATLTQACDKYKQQNLPHLTVVRKKLERREEI-PN 964
Query: 834 VGDRVPYVIIKAAKGAKA-YERSEDPIYVLENNIPIDTHYYLENQIS 879
GDR+ YV++ A Y +EDP YV + + I+ Y N IS
Sbjct: 965 TGDRIFYVLLAHPDERVANYVIAEDPDYVETHRLQINCSKYFSNLIS 1011
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 152/336 (45%), Gaps = 39/336 (11%)
Query: 104 DSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D + E LP S + AII + G T +G VC VHG YFY++ D
Sbjct: 139 DVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATRDA-- 196
Query: 159 FHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM-VASCR 217
+++ +E++ S V ++ V K S+M + S P+L + + + + R
Sbjct: 197 VSKVMSNLEKESSSCSYV------VKPVNKMSLMGFNTNTS-PYLMMSFSNHFVGKEAAR 249
Query: 218 GILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQ 277
+ D LD F +E V RF++D W + R+T+K S C+
Sbjct: 250 NLKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD-SNCE 298
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQVANLV 333
LE DC D+ E+ ++ ++FDIEC FP+ T+ D +IQ++ V
Sbjct: 299 LELDCCVGDLQVLRDRVEWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS-CV 354
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
+ +++ TL SCA I GV + +E +++ ++ F+R P+ + GYNI F
Sbjct: 355 CFDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAF 414
Query: 394 DLPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
D+PY+I + + ++Q G +R + C K
Sbjct: 415 DIPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 445
>gi|51874260|ref|YP_073778.1| DNA polymerase catalytic subunit [Human herpesvirus 7]
gi|2746268|gb|AAC40752.1| U38 [Human herpesvirus 7]
Length = 1013
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 186/542 (34%), Positives = 284/542 (52%), Gaps = 61/542 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
EK+++ + I ++ R + YC++D+ L +L K+ + + E+A + + I
Sbjct: 450 EKKNLSYKEIPKKFIDGSKGRAVVGRYCIQDSLLVVQLFTKINYHYEMAEVASLAYITIR 509
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVK---QAGSEQGTYEGATVLEARAGFYEKPIA 516
+ GQ K+ +L +AK N+++P++ G E Y+GATVLE + G+Y P
Sbjct: 510 CAVFEGQQKKIFPCILHEAKNLNMILPSMNTNFNKGKENVGYKGATVLEPKIGYYATPTV 569
Query: 517 TLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPE---CVNKTPSGETFVKSNLQKGIL 573
DF SLYPSIMMA+NLCYSTLV E+A + L + V+ P FVK +++ IL
Sbjct: 570 VFDFQSLYPSIMMAHNLCYSTLVVDENAV-IGLHADDILTVHVGPVTHRFVKKTVRESIL 628
Query: 574 PEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEI 633
+L++ L RK K +K +P+ + +LD +QLALK + NSVYG TGAT LPC+ I
Sbjct: 629 ASLLKKWLDKRKEVKMQMKMCNNPVMEMLLDKKQLALKTTCNSVYGVTGATHSLLPCVAI 688
Query: 634 SSSVTSYGRQMIEHTKKLVE----------DKF-TTVGGYE--HNAEVIYGDTDSVMVQF 680
++SVT GR+M+ T V+ +KF T G + EVIYGDTDS+ V F
Sbjct: 689 AASVTCLGREMLCKTVDYVDSAMYSDTFFIEKFGLTRGDFSGTFGIEVIYGDTDSLFVTF 748
Query: 681 GVPTVEAAMKLGREAADYISGTFIK-PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD- 738
+A ++ A +I+ T K PIKLEFEK+ +P +LI KKRY G K D
Sbjct: 749 KNVCPKALKRIAPSIASHITNTLFKHPIKLEFEKILFPLILICKKRYIG-------KLDD 801
Query: 739 -KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD--------------------IPGAV 777
+ KG+E VR+ +C VK +V + + + D D +P +
Sbjct: 802 ATLVFKGVELVRKTSCDFVKVVVKDIIDLLFWDVDVQKSAEKLSNMTIQEIYENGVPDGI 861
Query: 778 QYVKSTISD----LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAP 832
Q + + D L +NR+++ LV++ L+K Y + H+ + +R+ +R P
Sbjct: 862 QKIIKKLCDARDALFLNRVNIKSLVLSSVLSKDISAYKQANLPHLAVVKRLAQRKEEL-P 920
Query: 833 NVGDRVPYVIIKAAKGAKA----YERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEP 888
N+GDRV Y++I + K YE +EDP Y +ENN+ I+ Y E QI K + P
Sbjct: 921 NIGDRVMYILIAPTETVKKTFHNYELAEDPAYAIENNLKINADKYFE-QIMKAVTNAISP 979
Query: 889 IL 890
I
Sbjct: 980 IF 981
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 144/331 (43%), Gaps = 39/331 (11%)
Query: 74 KWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVC 133
K R PL +S++F I+ + ++P S +I++FG T G VC
Sbjct: 75 KELRAPLKFHIYDASESLLFTD-SIENIPFQYRHFVIP----SGNVIKLFGKTECGKKVC 129
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRH-IEMVQKRSIM 192
V G YFY C + L R+ +S++ IE V K +
Sbjct: 130 INVFGQNSYFY--CEYQCKKE--------LNSRICSLLNSSEIKMSCSFSIESVTKYNFY 179
Query: 193 YYQQQKSQPFLKIVVALPTMVASCRG---ILDRGIQLDGLGMKSFMTYESNVLFALRFMI 249
Y + + K+ + S R +L+ G+ + YE+ V RF I
Sbjct: 180 GYNTEPIKNLFKL--SFSNFYISNRIGKILLNEGVSV----------YEAEVEILNRFFI 227
Query: 250 DCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
D N+ W ++ ++ AK+ S ++E +C SD+ + + SFDI
Sbjct: 228 DNNLKSFGWYQINYLSIQEFAKS-SNVEIELNCHVSDLFLLKEDS----WPLYDCCSFDI 282
Query: 310 ECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETER 367
EC + G+FP E D +IQ++ ++ E +++ TL +C I GV + F +E
Sbjct: 283 ECLSQNGNFPDAEQMGDIIIQIS-VIDFDSEGNYQSKHLFTLGTCEQIEGVFIYEFASEF 341
Query: 368 DVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
++L A+ F++ P+++ GYNI FDL YL
Sbjct: 342 ELLYAFFLFLKCKSPEILTGYNIINFDLKYL 372
>gi|343963231|gb|AEM72534.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 273/527 (51%), Gaps = 56/527 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + + R + YC+ D+ L +L KL+F + +AR++ + ++
Sbjct: 494 KKHSVPYKQIPVLFRRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMN 553
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L A+++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 554 KVIFDGQQSRIFTCMLAAARREGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 611
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T D L + T +G FVK +++K IL ++L
Sbjct: 612 FASLYPSIIQAYNLCYCTLITDNDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLL 671
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KDPL + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 672 TSWLAERKAVREKLKHCKDPLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 731
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V +V+YGDTDSV V
Sbjct: 732 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVLLC- 790
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 791 -GIEDADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 845
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 846 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 905
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPN 833
L NR+D+ L ++ LT+ D Y + H+ + + +R PN
Sbjct: 906 KLVALITDARERLYENRVDIHELQLSATLTQACDKYKQQNLPHLTVVRKKLERREEI-PN 964
Query: 834 VGDRVPYVIIKAAKGAKA-YERSEDPIYVLENNIPIDTHYYLENQIS 879
GDR+ YV++ A Y +EDP YV + + I+ Y N IS
Sbjct: 965 TGDRIFYVLLAHPDERVANYVIAEDPDYVETHRLQINCSKYFSNLIS 1011
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 152/336 (45%), Gaps = 39/336 (11%)
Query: 104 DSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D + E LP S + AII + G T +G VC VHG YFY++ D
Sbjct: 139 DVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATRDA-- 196
Query: 159 FHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM-VASCR 217
+++ +E++ S V ++ V K S+M + S P+L + + + + R
Sbjct: 197 VSKVMSNLEKESSSCSYV------VKQVNKMSLMGFNTNTS-PYLMMSFSNHFVGKEAAR 249
Query: 218 GILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQ 277
+ D LD F +E V RF++D W + R+T+K S C+
Sbjct: 250 NLKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD-SNCE 298
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQVANLV 333
LE DC D+ E+ ++ ++FDIEC FP+ T+ D +IQ++ V
Sbjct: 299 LELDCCVGDLQVLRDRVEWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS-CV 354
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
+ +++ TL SCA I GV + +E +++ ++ F+R P+ + GYNI F
Sbjct: 355 CFDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAF 414
Query: 394 DLPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
D+PY+I + + ++Q G +R + C K
Sbjct: 415 DIPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 445
>gi|301331662|gb|ADK70786.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 273/527 (51%), Gaps = 56/527 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + + R + YC+ D+ L +L KL+F + +AR++ + ++
Sbjct: 494 KKHSVPYKQIPVLFRRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMN 553
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L A+++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 554 KVIFDGQQSRIFTCMLAAARREGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 611
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T D L + T +G FVK +++K IL ++L
Sbjct: 612 FASLYPSIIQAYNLCYCTLITDNDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLL 671
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KDPL + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 672 TSWLAERKAVREKLKHCKDPLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 731
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V +V+YGDTDSV V
Sbjct: 732 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVLLC- 790
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 791 -GIEDADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 845
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 846 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 905
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPN 833
L NR+D+ L ++ LT+ D Y + H+ + + +R PN
Sbjct: 906 KLVALITDARERLYENRVDIHELQLSATLTQACDKYKQQNLPHLTVVRKKLERREEI-PN 964
Query: 834 VGDRVPYVIIKAAKGAKA-YERSEDPIYVLENNIPIDTHYYLENQIS 879
GDR+ YV++ A Y +EDP YV + + I+ Y N IS
Sbjct: 965 TGDRIFYVLLAHPDERVANYVIAEDPDYVETHRLQINCSKYFSNLIS 1011
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 153/340 (45%), Gaps = 39/340 (11%)
Query: 100 YVIGDSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPD 154
+ D + E LP S + AII + G T +G VC VHG YFY++
Sbjct: 135 FCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATR 194
Query: 155 DISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM-V 213
D +++ +E++ S V ++ V K S+M + S P+L + + +
Sbjct: 195 DA--VSKVMSNLEKESSSCSYV------VKPVNKMSLMGFNTNTS-PYLMMSFSNHFVGK 245
Query: 214 ASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL 273
+ R + D LD F +E V RF++D W + R+T+K
Sbjct: 246 EAARNLKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD- 294
Query: 274 SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQV 329
S C+LE DC D+ E+ ++ ++FDIEC FP+ T+ D +IQ+
Sbjct: 295 SNCELELDCCVGDLQVLRDRVEWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQI 351
Query: 330 ANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYN 389
+ V + +++ TL SCA I GV + +E +++ ++ F+R P+ + GYN
Sbjct: 352 S-CVCFDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYN 410
Query: 390 ICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
I FD+PY+I + + ++Q G +R + C K
Sbjct: 411 INAFDIPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 445
>gi|134038638|gb|ABO48392.1| DNA polymerase catalytic subunit [Wood mouse herpesvirus]
Length = 1026
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 268/525 (51%), Gaps = 59/525 (11%)
Query: 399 IEKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPI 458
+EKEDV + I L R ++ YC+ D+ L LL M E+ ++ +P+
Sbjct: 462 MEKEDVSYKDIPVLFKDGPTGRAKIGTYCVMDSQLVLDLLKYFMAHIEIAEIGKLAKIPV 521
Query: 459 SFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATL 518
+L+ GQ I+V S LL A+++N ++P+ QA Y+GATV++ GFY P+ +
Sbjct: 522 RRVLTDGQQIRVFSSLLDAARRENYILPS-NQAKCSNSGYQGATVIDPITGFYNTPVLVV 580
Query: 519 DFASLYPSIMMAYNLCYSTLV-----------TPEDARKLNLPPECVNKTPSGETFVKSN 567
DFASLYPSI+ A+NLCYST++ TP D LP V+ FVK +
Sbjct: 581 DFASLYPSIIQAHNLCYSTIIPDNKLQMFPNLTPADYETFTLPSGTVH-------FVKKH 633
Query: 568 LQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQ 627
+ +L +L + LA RK +A L DP+ K +LD +QLA+K++ NSVYGFTG G
Sbjct: 634 KKCSLLSRLLTKWLAKRKEIRAQLAACDDPITKTILDKQQLAIKVTCNSVYGFTGVASGM 693
Query: 628 LPCIEISSSVTSYGRQMIEHTKKLVED-KFTTVGGYEHNA-------EVIYGDTDSVMVQ 679
LPC++I+ ++T GR+M+E ++ +E+ T+G H VIYGDTDS+ V+
Sbjct: 694 LPCLQIAETITYQGRKMLEKSRAYIENITSATLGALMHKTYNPDAYFRVIYGDTDSLFVE 753
Query: 680 FGVPTVEAAMKLGREAADYIS-GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
T+E ++ G AD + F++PIKLE EK + L+I+KKRY G N
Sbjct: 754 TQGYTLEEVVEFGEMLADTTTKALFVQPIKLEAEKTFKSLLMITKKRYVGTLSNN----- 808
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS---------------- 782
K+ KG++ VR+ C V++ + + IL D D+ A Q + +
Sbjct: 809 KLLLKGVDLVRKTACKFVQSATSTVVSLILNDNDVRAAAQTMSNWGKLDVYRRGLPSGFS 868
Query: 783 --------TISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPN 833
S L+ N +D+ L T L+K +Y+ H+ + +++ R P
Sbjct: 869 KVIETLNHNHSQLISNSVDIDHLTFTTELSKPLSEYKTTNLPHLAVFKKLVSRQEE-LPQ 927
Query: 834 VGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
+ DR+PYV I ++ + +E P YV + N+ I Y + +
Sbjct: 928 IHDRIPYVFIDGSEKGLKSDLAEHPTYVRQQNLRIAHKVYFDKLV 972
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 136/291 (46%), Gaps = 33/291 (11%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN---R 172
S ++ + G G SVC V G + YFY P + +L ++E +
Sbjct: 125 SGTVVHLLGKLENGQSVCVNVFGQKIYFYAKAPNSL----------VLSSAIQEVMSQFK 174
Query: 173 NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK 232
+ P F HI +K ++ Y ++ ++ + + + + C + GI L
Sbjct: 175 GKRGPSF--HITQEEKIPLVTYTEELTKVYKVTLSSSQLLYPICDKLKALGIDL------ 226
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
+E+NV RFMID N W V R++ K S CQLE DC +I HP
Sbjct: 227 ----FETNVDACQRFMIDNNFSTFGWYTCDVADLRQSKKD-SLCQLELDCGLENI-CHHP 280
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIRNVMTLK 350
E S P+ I+SFDIEC G G FP HD +IQ++ VT + + +L
Sbjct: 281 E--LSSWPPYNIMSFDIECLGECG-FPCALKEHDCIIQIS-CVTWNCATNSISKLLFSLG 336
Query: 351 SCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+C PI G +V +E D+L+ + F+R+ + + GYNI FDLPY+I++
Sbjct: 337 TCDPIEGTEVYECPSEYDLLMGFLIFMRDSGVEFIAGYNIANFDLPYIIDR 387
>gi|358393560|gb|EHK42961.1| hypothetical protein TRIATDRAFT_294114 [Trichoderma atroviride IMI
206040]
Length = 1556
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 207/670 (30%), Positives = 324/670 (48%), Gaps = 42/670 (6%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR EV+ ++ Y + + +L+ + H+S + S LQ+G A
Sbjct: 872 TGRHMINIWRAMRSEVN---LLQYTMENV-VWHLLHRRIPHYSWRSLTSWLQSGKARDLN 927
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
RL Y + L ++L+ I E AR+ GV + SRG KV S + R AK +
Sbjct: 928 RLLRYYRTRSRLDLKILESNELISRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 987
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ KQ G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 988 NFMLVSPSRKQVGQQNALECLPLVMEPQSSFYSSPLVVLDFQSLYPSVMIAYNYCYSTFL 1047
Query: 540 T-------------PEDARK---LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
E R+ L L + +N P+G +VKS ++K +L ++L E+L
Sbjct: 1048 GRITDWRGKSKMGFTEYKRQDGLLTLLEDHINIAPNGMMYVKSEVRKSLLAKMLTEILET 1107
Query: 584 RKRAKADLK-EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K +K + D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1108 RIMVKNGMKTDQDDKTLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTG 1167
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + +V + AEV+YGDTDS+ + + A +G+E A I+
Sbjct: 1168 RETLERATAYIH----SVERW--GAEVVYGDTDSLFIYLKGRSRNEAFAIGQEIAQAITE 1221
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLV 760
KPIKL+FEKVY+P +L++KKRY G Y T + + D KGIETVRRD + +
Sbjct: 1222 RNPKPIKLKFEKVYHPCVLLAKKRYVGYKYETKDQLKPEFDAKGIETVRRDGTPAEQKIE 1281
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + D+ +Y + ++ ++ + K + + + A +
Sbjct: 1282 EKALRLLFETADLSQVKRYFQKQCKKVMRGKVSVQDFCFAKEVRLGSYSAHGPAPAGALI 1341
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
+ R +DA P G+RVPYV+I A GA+ +R P +L N + +D YY+ I
Sbjct: 1342 SARKMLQDARAEPQYGERVPYVVITGAPGARLIDRCVSPEELLRNPHWQLDADYYISKNI 1401
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLS--CIGCKALISNG 936
PL RIF + N + + R + + S LS C+ C+ I+
Sbjct: 1402 IPPLERIFSLVGANVRQWYDTMPRIRRVHQTKGLGSKKRTLEAYMLSVHCMICRRKIAGT 1461
Query: 937 ---TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIF 992
+LC C R +++ E + CQ C+G ++V C S DCP+F
Sbjct: 1462 AELSLCRFCYARMPASLLALQAKLTAAERKYDETLRICQSCEGIGPLEEVGCDSHDCPVF 1521
Query: 993 YRRKKAQKDM 1002
+ R K + M
Sbjct: 1522 WTRTKLKNKM 1531
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 111 PLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA 170
PL + +IRIFG T G VC VHG PY Y+ + D + F L + A
Sbjct: 34 PLKATKVPVIRIFGSTEFGQKVCAHVHGVFPYMYVEYDGNLNRDAVGSFVYRLHLSIDHA 93
Query: 171 -------NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG 223
++N +FV I +V K + Y + FLKI + P ++ +L +G
Sbjct: 94 LGISYRQDQNGDKARFVARITLV-KGTPFYGYSVGYKFFLKIYMFNPAVMTRLADLLQQG 152
Query: 224 IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ L + F YE+++ + L+FMID N+ G +++E +R
Sbjct: 153 VILK----RKFQPYEAHLQYLLQFMIDYNLYGCDFVESSQTYFR 192
>gi|154305267|ref|XP_001553036.1| hypothetical protein BC1G_08928 [Botryotinia fuckeliana B05.10]
Length = 230
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/227 (57%), Positives = 173/227 (76%), Gaps = 8/227 (3%)
Query: 794 LSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYE 853
+S LVITK L K DY K AHVELAERM+KRDA +AP +GDRV YVIIK + GAK +E
Sbjct: 1 MSKLVITKALAKA--DYTAKQAHVELAERMKKRDAGSAPTLGDRVAYVIIKGSAGAKNFE 58
Query: 854 RSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPS 912
RSEDPI+VLENN+PIDT YYL+NQ++KPL RIFEPIL + + LL+G HTR+IS++ P+
Sbjct: 59 RSEDPIFVLENNVPIDTKYYLDNQLAKPLGRIFEPILGETKANSLLAGAHTRAISVAAPT 118
Query: 913 NSGIMKFAKRQLSCIGC-----KALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRL 967
G+MKFAK+ +C+ C KA +G +C+ C R E+Y K +++V +LEV FGRL
Sbjct: 119 IGGLMKFAKKTSTCMSCKKPLVKAHEKDGAVCTDCAPRIGEMYQKQINKVSDLEVRFGRL 178
Query: 968 WTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
WTQCQ CQGS+H +V+C+S+DCPIFY R KA+KD+ +A +L+R++F
Sbjct: 179 WTQCQRCQGSMHCEVICSSKDCPIFYMRMKAKKDVEDAGKELERFDF 225
>gi|330507958|ref|YP_004384386.1| DNA polymerase 2 [Methanosaeta concilii GP6]
gi|328928766|gb|AEB68568.1| DNA polymerase 2 [Methanosaeta concilii GP6]
Length = 891
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 185/541 (34%), Positives = 294/541 (54%), Gaps = 56/541 (10%)
Query: 399 IEKEDVHHSIISDL--QNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGV 456
+EK DV+ I +L + N E +R Y +D+ L RLL L + Y+ ++R +G
Sbjct: 334 MEKYDVNPQEIEELWAEESNGEGLKRFISYSRRDSVLALRLLLDLRLMDKYIALSRASGS 393
Query: 457 PISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTY------EGATVLEARAGF 510
+ +++ GQS V + LLR+ ++ + V+P +G Y +G VL G
Sbjct: 394 LLQDIVNGGQSGMVENLLLRRFREISRVVPPKPDSGLSDERYVENEELKGGAVLVPEKGL 453
Query: 511 YEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQK 570
E + LD+ SLYP+IMMA+NLCYST+V + K + + +PSG +FV N+
Sbjct: 454 VED-VVILDYKSLYPTIMMAHNLCYSTVVLADSPEKKD-----IITSPSGGSFVSPNVSS 507
Query: 571 GILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPC 630
G++P++L+ELL R K +K+A + E+ LD +Q ALKI NS YG++G +L
Sbjct: 508 GVMPQVLKELLDQRTETKRLMKKASEE-ERRFLDAKQYALKILLNSFYGYSGYARARLYS 566
Query: 631 IEISSSVTSYGRQMIEHTKKLVED-----------------KFTTVGGYEHNAEVIYGDT 673
+ ++++VTS+GR+ I TKK+++D K G + V+YGDT
Sbjct: 567 LALANAVTSFGRENIIRTKKIIDDIGSVYVIEGRAVFKDELKLGAPTGKGFDLNVVYGDT 626
Query: 674 DSVMVQFGVP----TVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL 729
DSV V+ ++E A +G++ A+ ++ + +P++L FE + ++KKRYA
Sbjct: 627 DSVFVRLSPHNEPVSLEDAGLIGKKIAETVTSSLPQPMELVFEAFARRGIFLAKKRYA-- 684
Query: 730 YW----TNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTIS 785
W E D++ +G+ETVRRD C L + CL +L + + AV++V+S +
Sbjct: 685 LWIFEQMGEEWKDRIKVRGMETVRRDWCGLTSGTLKTCLELVLKEGKVDEAVEHVRSVV- 743
Query: 786 DLLMNRMDLSL-------LVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRV 838
+ + +DLS L +T+ TK+ Y+ K H++L E+MR+R P VGDRV
Sbjct: 744 -VRLQNLDLSQDPGILEELTLTRRYTKSTGSYKNKQPHIQLVEKMRER-GGKVPTVGDRV 801
Query: 839 PYVIIKAAKGAKA----YERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNAS 894
P+VII+ G K +R+EDP +VLENNI +DT YY+ QI P++RIFE N
Sbjct: 802 PFVIIRGKGGKKNKTLFVDRAEDPEFVLENNISLDTEYYVNKQILPPVMRIFESFGVNKD 861
Query: 895 K 895
+
Sbjct: 862 R 862
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 46/314 (14%)
Query: 91 IMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQG 150
++FQ LD +Y SG ++++FG T EG SV K GF PYFY S
Sbjct: 1 MIFQILDANYA----------YDSGRKPLVQLFGTTPEGQSVTVKAAGFRPYFYASA--- 47
Query: 151 MGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALP 210
+EG + A + K +E++++ + Y Q+K + L+I P
Sbjct: 48 ------------IEGCLESAADDLKAMGL--EVEVLERFEPIGY-QKKPKKMLQITTNDP 92
Query: 211 TMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA 270
V R + +R L G+ YE+++LF RF+ID ++ G W+E P+ ++ +
Sbjct: 93 KEV---RNLRERVRSLPGIR----AVYETDILFKNRFLIDKSLGGMGWVEAPIPEW-TLS 144
Query: 271 KTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVA 330
+ Q D D S P + AP R +SFDIEC G P+ PVI ++
Sbjct: 145 QNAGSVQSGRDLPPVDAASIRPV-QHEANAPLRFMSFDIECLPDHGAMPKAEKSPVILIS 203
Query: 331 NLVTLQGEKQPFIRNVMTLKSC---APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIG 387
+ + E Q V+ K P D + E ++L + IR+ +PD++ G
Sbjct: 204 --MAFEPEYQGNKDLVLVGKEIDCPRP----DTRACRNEYELLNQFAAIIRDYNPDIIAG 257
Query: 388 YNICKFDLPYLIEK 401
YN FD PYL E+
Sbjct: 258 YNSNDFDFPYLQER 271
>gi|357121575|ref|XP_003562494.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Brachypodium
distachyon]
Length = 1720
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 199/649 (30%), Positives = 314/649 (48%), Gaps = 72/649 (11%)
Query: 414 NGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQ 473
G R R Y A L +++KL I E+ARV G+ +LSRG +V S
Sbjct: 1063 TGPGRGRHRCIQYASSRAMLNLEIINKLDLINRTSELARVFGIDFFSVLSRGSQFRVESM 1122
Query: 474 LLRKAKQKNL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAY 531
LLR A +N + P +Q S+ V+E + FY P+ LDF SLYPS+++AY
Sbjct: 1123 LLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESAFYSDPVLVLDFQSLYPSMIIAY 1182
Query: 532 NLCYSTL---VTPEDARKLNL------PPECVNK------TPSGETFVKSNLQKGILPEI 576
NLCYST V P + L + P V+ TP+G +V+ ++KG++P +
Sbjct: 1183 NLCYSTCLGKVFPSKSNVLGVSTYSADPHTIVDLKNQLLLTPNGVLYVQPEIRKGVVPRL 1242
Query: 577 LEELLAAR---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIE 632
LEE+L+ R K+A L ++ L+K +L+ RQLALK+ AN YG+T A G++PC E
Sbjct: 1243 LEEILSTRIMVKQAMKKLSPSQKVLQK-ILNARQLALKLIANVTYGYTAAGFSGRMPCAE 1301
Query: 633 ISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEH---NAEVIYGDTDSVMVQFGVPTVEAAM 689
++ S+ GR+ +E V +H +A+V+YGDTDS+ V + E A
Sbjct: 1302 LADSIVQCGRRTLETAISFVN---------QHPLWDAKVVYGDTDSMFVLLKGRSREEAF 1352
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETV 748
++G+E A I+ P+ L+FEKVY+P L++KKRY G + +PE+ + + D KGIETV
Sbjct: 1353 RIGKEIASLITAINPDPVTLKFEKVYHPCFLLTKKRYVGYSYESPEQNEPIFDAKGIETV 1412
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRD C V ++ L + ++D+ Y++ + +L ++ + + K + + G
Sbjct: 1413 RRDTCPAVAKILERSLRIMFEEQDLVKVKSYLERQWTRILSGKVLIQDFIFAKEV-RLG- 1470
Query: 809 DYEVKAAHVE----LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN 864
Y +A+ + +A + D P G+RVPYV+I GA+ + DP +LE
Sbjct: 1471 TYSSRASTLPPAAIVATKAMLSDPRAEPRYGERVPYVVIHGEPGARLVDMVIDPYGLLEV 1530
Query: 865 NIP--IDTHYYLENQISKPLLRIF---------------EPILKNASKELLSGDHTR--- 904
P ++ YY+ QI L R+F PI +K + H+
Sbjct: 1531 GSPYRLNDLYYITKQIIPALQRVFGLLGADLNKWFTEMPRPIRPTLAKRQSASGHSAFSR 1590
Query: 905 -------SISISTPSNSGIMKFAKRQLSCIGCKALISNG-TLCSHCKGREAELYCKTVSQ 956
++ P+ G + C C +I T C++C EA + +
Sbjct: 1591 DGSFIRLGLNKKAPAKGGRIDTYYMSSHCTVCGDIIQGSDTFCNNCLKNEAVVATVVAGR 1650
Query: 957 VQELEVLFGRLWTQCQECQGS---LHQDVLCTSRDCPIFYRRKKAQKDM 1002
+LE L C C G+ + V C S CP+FY R+K Q+++
Sbjct: 1651 TSKLEREIQHLAAICGHCGGADWIVESGVKCVSLACPVFYERRKIQREL 1699
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKV-- 176
+IRI+G T G C VH PY Y+ P+ + +I + + G + + + +V
Sbjct: 52 VIRIYGSTPAGQKTCLHVHQALPYLYVPYPEELL-HNIERGNSCMTGLLSDLEKALQVRG 110
Query: 177 PQFVRHIE---MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
P +HI +V+ + + Y + + F+KI + P V+ L G L+ +
Sbjct: 111 PAKRKHIHGCSLVRAKKLYGYHSCE-EIFVKIYLYYPHEVSRAATHLLDGAVLN----RV 165
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F YES++ + L F++D N+ G + V K+R
Sbjct: 166 FQPYESHIPYLLHFLVDYNLYGMGHVHVTDFKFR 199
>gi|262285059|gb|ACY41087.1| DNA polymerase catalytic subunit [Wood mouse herpesvirus]
Length = 1026
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 268/525 (51%), Gaps = 59/525 (11%)
Query: 399 IEKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPI 458
+EKEDV + I L R ++ YC+ D+ L LL M E+ ++ +P+
Sbjct: 462 MEKEDVSYKDIPVLFKDGPTGRAKIGTYCVMDSQLVLDLLKYFMAHIEIAEIGKLAKIPV 521
Query: 459 SFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATL 518
+L+ GQ I+V S LL A+++N ++P+ QA Y+GATV++ GFY P+ +
Sbjct: 522 RRVLTDGQQIRVFSSLLDAARRENYILPS-NQAKCSNSGYQGATVIDPITGFYNTPVLVV 580
Query: 519 DFASLYPSIMMAYNLCYSTLV-----------TPEDARKLNLPPECVNKTPSGETFVKSN 567
DFASLYPSI+ A+NLCYST++ TP D LP V+ FVK +
Sbjct: 581 DFASLYPSIIQAHNLCYSTIIPDNKLQMFPNLTPTDYETFTLPSGTVH-------FVKKH 633
Query: 568 LQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQ 627
+ +L +L + LA RK +A L DP+ K +LD +QLA+K++ NSVYGFTG G
Sbjct: 634 RKCSLLSRLLTKWLAKRKEIRAQLAACDDPITKTILDKQQLAIKVTCNSVYGFTGVASGM 693
Query: 628 LPCIEISSSVTSYGRQMIEHTKKLVED-KFTTVGGYEHNA-------EVIYGDTDSVMVQ 679
LPC++I+ ++T GR+M+E ++ +E+ T+G H VIYGDTDS+ V+
Sbjct: 694 LPCLQIAETITYQGRKMLEKSRAYIENITSATLGALMHKTYNPDAYFRVIYGDTDSLFVE 753
Query: 680 FGVPTVEAAMKLGREAADYIS-GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
T+E ++ G AD + F++PIKLE EK + L+I+KKRY G N
Sbjct: 754 TQGYTLEEVVEFGEMLADTTTKALFVQPIKLEAEKTFKSLLMITKKRYVGTLSNN----- 808
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS---------------- 782
K+ KG++ VR+ C V++ + + IL D D+ A Q + +
Sbjct: 809 KLLLKGVDLVRKTACKFVQSATSTVVSLILNDNDVRAAAQTMSNWGKLDVYRKGLPSGFS 868
Query: 783 --------TISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPN 833
S L+ N +D+ L T L+K +Y+ H+ + +++ R P
Sbjct: 869 KVIEALNHNHSQLISNSVDIDHLTFTTELSKPLTEYKTTNLPHLAVFKKLVSRQEE-LPQ 927
Query: 834 VGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
+ DR+PYV I ++ + +E P YV + N+ I Y + +
Sbjct: 928 IHDRIPYVFIDGSEKGLKSDLAEHPTYVRQQNLRIAHKVYFDKLV 972
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 136/291 (46%), Gaps = 33/291 (11%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN---R 172
S ++ + G G SVC V G + YFY P + +L ++E +
Sbjct: 125 SGTVVHLLGKLENGQSVCVNVFGQKIYFYAKAPNSL----------VLSSAIQEVMSQFK 174
Query: 173 NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK 232
+ P F HI +K ++ Y ++ ++ + + + + C + GI L
Sbjct: 175 GKRGPSF--HITQEEKIPLVTYTEELTKVYKVTLSSSQLLYPICDKLKALGIDL------ 226
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
+E+NV RFMID N W V R++ K S CQLE DC +I HP
Sbjct: 227 ----FETNVDACQRFMIDNNFSTFGWYTCDVADLRQSKKD-SLCQLELDCGLENI-CHHP 280
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIRNVMTLK 350
E S P+ I+SFDIEC G G FP HD +IQ++ VT + + +L
Sbjct: 281 E--LSSWPPYNIMSFDIECLGECG-FPCALKEHDCIIQIS-CVTWNCATNSISKLLFSLG 336
Query: 351 SCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+C PI G +V +E D+L+ + F+R+ + + GYNI FDLPY+I++
Sbjct: 337 TCDPIEGTEVYECPSEYDLLMGFLIFMRDSGVEFIAGYNIANFDLPYIIDR 387
>gi|116754694|ref|YP_843812.1| DNA polymerase Pol2 [Methanosaeta thermophila PT]
gi|116666145|gb|ABK15172.1| replicative DNA polymerase I [Methanosaeta thermophila PT]
Length = 941
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 182/512 (35%), Positives = 271/512 (52%), Gaps = 85/512 (16%)
Query: 447 YVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIP---NVKQAG---SEQGTYEG 500
Y+ +ARV+G + +++ GQS V + +LR+ + V+P + +++G ++ +G
Sbjct: 412 YIALARVSGSLLQDIVNGGQSGMVENLILRRFRSHKRVLPPKPDSEESGERFTDADELKG 471
Query: 501 ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG 560
VL G E + LD+ SLYP+IMMA+NLCYST+VT E PPE V K+PSG
Sbjct: 472 GAVLPPVKGLVEN-VVILDYKSLYPTIMMAHNLCYSTVVTKER------PPEVV-KSPSG 523
Query: 561 ETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGF 620
F ++ KGI+PEIL ELL R K +K A + E+A LD +Q ALKI NS YG+
Sbjct: 524 GYFASPSVCKGIVPEILRELLEKRTETKMLMKSAGED-ERAFLDAKQYALKILLNSFYGY 582
Query: 621 TGATVGQLPCIEISSSVTSYGRQMIEHTKKLVED--------------KFTTV------- 659
+G +L + ++++VTS+GR I TK+++E+ + T+V
Sbjct: 583 SGYARARLYSLTLANAVTSFGRHNILRTKEMIEEIGSVYIVDGKALLPEETSVSSNPKPP 642
Query: 660 -------GGYEHNAEVIYGDTDSVMVQFGVP---TVEAAMKLGREAADYISGTFIKPIKL 709
G ++ V+YGDTDSV V+ T E A +GR+ A+ I+ KP++L
Sbjct: 643 DTIELNSAGRRYDLSVVYGDTDSVFVRISSGYSITPEDAELIGRKIAETITSKLPKPMEL 702
Query: 710 EFEKVYYPYLLISKKRYA----------------------------GLYWTNPEKFDKMD 741
FE + ++KKRYA G+ W D++
Sbjct: 703 VFEAFARRAIFLAKKRYALWLFERVSTQSKPLDGVEGSSKTPSEGSGIIWR-----DRIK 757
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTIS-----DLLMNRMDLSL 796
+G+ETVRRD C L + CL IL + + AVQ+V+ I D+ +R L
Sbjct: 758 VRGMETVRRDWCDLTSKTLRRCLELILKEGRVDDAVQHVRDVIQRLRDMDIRRDRELLDD 817
Query: 797 LVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSE 856
LV+T+ TK Y K H++L E+MR+R P VGDRVP++I+K K +R+E
Sbjct: 818 LVLTRRFTKDPSSYRNKQPHIQLVEKMRRR-GGRVPGVGDRVPFIIVKGGKKTLFVDRAE 876
Query: 857 DPIYVLENNIPIDTHYYLENQISKPLLRIFEP 888
DP Y +ENN+PIDT YY+E Q+ P+LR+F P
Sbjct: 877 DPEYAVENNLPIDTEYYIEKQLLPPVLRLFMP 908
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 143/342 (41%), Gaps = 75/342 (21%)
Query: 93 FQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMG 152
FQ LD +YV S ++++FG+ G S+ C+V GF PYFY S
Sbjct: 3 FQILDANYVYDMSG----------YPVVQLFGIRDNGDSIICRVSGFRPYFYASA----- 47
Query: 153 PDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM 212
DI+ + +E +E+V++ + YQ K L+I+ P
Sbjct: 48 -HDITSAAEAVE-------------SMDLDVEIVERYEPIGYQS-KPIKMLRIIAKDPK- 91
Query: 213 VASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV----------- 261
S R I DR ++ + YE+++LF RF+ID + G W++V
Sbjct: 92 --SVREIRDRVREIPSVRA----VYETDILFKNRFLIDTGLGGMAWVKVLDVERDSTSAK 145
Query: 262 ---------PVGKYR---------KTAKTLSYCQL-EFDCLYSDI-ISRHPEGEFSKMAP 301
+ YR K ++ L C++ E D+ + + + AP
Sbjct: 146 ESRDGLSWYGLANYREVERDSTSAKESRVLEGCEMRERRRFIVDVPVEKLAPEDLESTAP 205
Query: 302 FRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPF--IRNVMTLKSCAPIVGVD 359
R +SFDIEC + G P P PVI ++ P+ + +++ + D
Sbjct: 206 LRFMSFDIECLPQNGEMPRPESSPVILIS-----MAFHPPYHGMSDLVLVGRELECDRPD 260
Query: 360 VMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
V ER ++ + I + DPD++ GYN +FD+PYL E+
Sbjct: 261 VEGCADERALISRFVSVIDDYDPDIIAGYNSNEFDIPYLRER 302
>gi|448932568|gb|AGE56127.1| DNA polymerase [Acanthocystis turfacea Chlorella virus MO0605SPH]
gi|448933574|gb|AGE57130.1| DNA polymerase [Acanthocystis turfacea Chlorella virus NE-JV-3]
gi|448936701|gb|AGE60248.1| DNA polymerase [Acanthocystis turfacea Chlorella virus WI0606]
Length = 902
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 290/512 (56%), Gaps = 25/512 (4%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G+AE R +A Y +D LP +LL KL + EMA +P+
Sbjct: 359 QKDDLPAMKIFEKFEGDAEDRAVIAKYAAQDTLLPLKLLSKLAIFEDVAEMANAVKIPMD 418
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ IP+ K A +G +EGATVLE + G Y +PIA LD
Sbjct: 419 WVGFRGQQVRAFSCLFGKAREMGYAIPDNK-AWPAEGKFEGATVLEPKKGAYFEPIAALD 477
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ T+V + + N+P + +G F S +G++P +L+
Sbjct: 478 FASLYPSIIRAHNMSPETIVM--EPKFANVPGVEYYEIQTGIGKFRYSQKSQGVVPALLD 535
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + +A D ++A+ D Q + K+ NSVYGF GA+ G +PC+ I++
Sbjct: 536 DLAKFRKNAKKLMAQAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFIPCVPIAA 595
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR-- 693
SVT+ GR MI+ + + + V+YGDTDS+MV+ +P + +
Sbjct: 596 SVTATGRNMIDVAARRALELLP-------GSVVVYGDTDSIMVKMKLPEGKDQNNINDHF 648
Query: 694 EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
E A +++G K P LEFEK+YYPY+L SKKRYA + + +P + K+D KG+ VR
Sbjct: 649 EVAKWLAGEITKEYKAPNDLEFEKIYYPYILYSKKRYAAIKFEDPNEKGKVDVKGLALVR 708
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD + ++++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 709 RDFSPITRDILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGYK 767
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAK--GAKAYERSEDPIYVLENNIP 867
E++ H+ +A ++ +R P+ G RVP+V ++ K R+EDP + N +
Sbjct: 768 NEMQ-PHLIVANKILERTGVPVPS-GARVPFVYVEDDDKIDLKQSMRAEDPTFAQNNGLV 825
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+++Q+ KPL+ +F+P++++ KEL
Sbjct: 826 VDRLFYIDHQLLKPLVSLFDPLVEDPEKELFG 857
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 135/310 (43%), Gaps = 51/310 (16%)
Query: 98 IDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS 157
+D+ GD N + I +FG T +G S C ++ F P F + P
Sbjct: 6 VDWRSGDENGQFK---------ITMFGKTVDGKSSCVRIR-FTPSFLLEMPDSWSAPRQR 55
Query: 158 HFHQILEGRMR-EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC 216
F I E M+ A ++ +P VQ++S+ + KS+ + A PTM A
Sbjct: 56 LF--ITETVMKYGAIKDMCLP--------VQRKSLWGFDNGKSRNMAQF--AFPTMEAMR 103
Query: 217 RGILDRGIQLDGLGMK-SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSY 275
+ G+K + YES+V +R + W+ V + +S
Sbjct: 104 KA---------KYGLKGNHQVYESSVDPIIRLFHLRKLSPSGWVRV--SQSYPAMTRVSR 152
Query: 276 CQLEFDCLY-----SDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQ 328
C +E +C + SD++S P I S+DIE R+ FP ++ D V Q
Sbjct: 153 CDIEVECNFTQVGPSDVVS---------TPPLVIASWDIETYSRERKFPLASNPDDYVTQ 203
Query: 329 VANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGY 388
+A GE +PF R V L A + GV+++S E DV+ AW D I + DV+IGY
Sbjct: 204 IATSFQRYGEAEPFKRVVFCLNDTAGVPGVEIVSCSQEADVINAWMDAITKEKTDVLIGY 263
Query: 389 NICKFDLPYL 398
N+ ++D Y+
Sbjct: 264 NVFQYDWKYV 273
>gi|334183720|ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|332196535|gb|AEE34656.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
Length = 1916
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 208/675 (30%), Positives = 325/675 (48%), Gaps = 50/675 (7%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK-EDVHHSIISD-LQNGNAETRRRLA 424
R VL AWR EV ++ Y I L +K + + ++++ +G A R R
Sbjct: 1232 RIVLNAWRLIRGEVKLNM---YTIEAVSEAVLRQKVPSIPYKVLTEWFSSGPAGARYRCI 1288
Query: 425 VYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL- 483
Y ++ A L ++ +L I E+ARV G+ +LSRG +V S LLR A +N
Sbjct: 1289 EYVIRRANLNLEIMSQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1348
Query: 484 -VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE 542
+ P +Q S+ V+E + FY+ P+ LDF SLYPS+++AYNLC+ST +
Sbjct: 1349 AISPGNQQVASQPAMECVPLVMEPESAFYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKL 1408
Query: 543 DARKLNL--------------PPECVNKTPSGETFVKSNLQKGILPEILEELLAAR---K 585
K+N + +TP+ +V +++GILP +LEE+L+ R K
Sbjct: 1409 AHLKMNTLGVSSYSLDLDVLQDLNQILQTPNSVMYVPPEVRRGILPRLLEEILSTRIMVK 1468
Query: 586 RAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQM 644
+A L ++ L + + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 1469 KAMKKLTPSEAVLHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1527
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
+E V NA V+YGDTDS+ V TV+ A +G+E A I+
Sbjct: 1528 LEKAISFVN------ANDNWNARVVYGDTDSMFVLLKGRTVKEAFVVGQEIASAITEMNP 1581
Query: 705 KPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTEC 763
P+ L+ EKVY+P L++KKRY G + +P + + + D KGIETVRRD C V + +
Sbjct: 1582 HPVTLKMEKVYHPCFLLTKKRYVGYSYESPNQREPIFDAKGIETVRRDTCEAVAKTMEQS 1641
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVEL 819
L ++I Y+ +L R+ L + K G T D + A + +
Sbjct: 1642 LRLFFEQKNISKVKSYLYRQWKRILSGRVSLQDFIFAKEVRLGTYSTRDSSLLPPAAI-V 1700
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP--IDTHYYLENQ 877
A + K D T P +RVPYV+I GA+ + DP+ +L+ + P ++ YY+ Q
Sbjct: 1701 ATKSMKADPRTEPRYAERVPYVVIHGEPGARLVDMVVDPLVLLDVDTPYRLNDLYYINKQ 1760
Query: 878 ISKPLLRIFEPILKNASKELLSGDH-TRSISISTPSNS-----GIMKFAKRQLSCIGCKA 931
I L R+F + + ++ L TRS P NS + + CI C
Sbjct: 1761 IIPALQRVFGLVGADLNQWFLEMPRLTRSSLGQRPLNSKNSHKTRIDYFYLSKHCILCGE 1820
Query: 932 LIS-NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGS---LHQDVLCTSR 987
++ + LC+ C ++ V + +LE L T C+ C G + V C S
Sbjct: 1821 VVQESAQLCNRCLQNKSAAAATIVWKTSKLEREMQHLATICRHCGGGDWVVQSGVKCNSL 1880
Query: 988 DCPIFYRRKKAQKDM 1002
C +FY R+K QK++
Sbjct: 1881 ACSVFYERRKVQKEL 1895
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQ-------GMGPDDISHFHQILEGRMREAN 171
+IRI+G T G C +H PY YI C + G+ ++ ++ + + N
Sbjct: 46 VIRIYGSTPAGQKTCLHIHRALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGN 105
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVAL-PTMVASCRGILDRGIQLDGLG 230
SK Q + E+V+ + Y + + F+KI ++ P VA +L G L
Sbjct: 106 AASKR-QHIHDCEIVRAKKFYGYHSTE-EAFVKIYLSYHPPDVARAASLLLAGAVLG--- 160
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
KS YES++ F L+F++D N+ G + + K+R
Sbjct: 161 -KSLQPYESHIPFILQFLVDYNLYGMGHVHISKMKFR 196
>gi|301331722|gb|ADK70825.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 175/507 (34%), Positives = 265/507 (52%), Gaps = 56/507 (11%)
Query: 420 RRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAK 479
R + YC+ D+ L +L KL+F + +AR++ + ++ ++ GQ ++ + +L A+
Sbjct: 514 RAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQSRIFTCMLAAAR 573
Query: 480 QKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
++ L+IP++ +AG + TY+GATVLE + GFY P+A DFASLYPSI+ AYNLCY TL+
Sbjct: 574 REGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFDFASLYPSIIQAYNLCYCTLI 631
Query: 540 TPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEILEELLAARKRAKADLKEAKDP 597
T D L + T +G FVK +++K IL ++L LA RK + LK KDP
Sbjct: 632 TDNDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLLTSWLAERKAVREKLKHCKDP 691
Query: 598 LEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFT 657
L + +LD +QLALK++ N+VYGFTG + G PC+ I+ SVT+ GRQ++ TK+ + D+F
Sbjct: 692 LMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESVTAQGRQLLAVTKQYICDRFN 751
Query: 658 T---------------VGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT 702
V +V+YGDTDSV V +E A +L ++++
Sbjct: 752 DWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVLLC--GIEDADRLYSALPNFVAHI 809
Query: 703 ----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
F PIKLE +KV+ LL+ KKRY G+ +K+ KGI+ VRR+ C VKN
Sbjct: 810 TKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----EKLSMKGIDLVRRNVCGFVKN 865
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISD------------------------LLMNRMDL 794
+ + D I AVQ + D L NR+D+
Sbjct: 866 TTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFFKLVALITDARERLYENRVDI 925
Query: 795 SLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKA-Y 852
L ++ LT+ D Y + H+ + + +R PN GDR+ YV++ A Y
Sbjct: 926 HELQLSATLTQACDKYKQQNLPHLTVVRKKLERREEI-PNTGDRIFYVLLAHPDERVANY 984
Query: 853 ERSEDPIYVLENNIPIDTHYYLENQIS 879
+EDP YV + + I+ Y N IS
Sbjct: 985 VIAEDPDYVETHRLQINCSKYFSNLIS 1011
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 146/339 (43%), Gaps = 37/339 (10%)
Query: 100 YVIGDSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPD 154
+ D + E LP S + AII + G T +G VC VHG YFY++
Sbjct: 135 FCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATR 194
Query: 155 DISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVA 214
D +++ +E++ S V ++ V K S+M + S P ++
Sbjct: 195 DA--VSKVMSNLEKESSSCSYV------VKPVNKMSLMGFNTNTS----------PYLMM 236
Query: 215 SCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLS 274
S L F +E V RF++D W + R+T+K S
Sbjct: 237 SFSNHFVGKEAARNLKDLDFEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD-S 295
Query: 275 YCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQVA 330
C+LE DC D+ E+ ++ ++FDIEC FP+ T+ D +IQ++
Sbjct: 296 NCELELDCCVGDLQVLRDRVEWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS 352
Query: 331 NLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNI 390
V + +++ TL SCA I GV + +E +++ ++ F+R P+ + GYNI
Sbjct: 353 -CVCFDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNI 411
Query: 391 CKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
FD+PY+I + + ++Q G +R + C K
Sbjct: 412 NAFDIPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 445
>gi|3176661|gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
[Arabidopsis thaliana]
Length = 1894
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 208/675 (30%), Positives = 325/675 (48%), Gaps = 50/675 (7%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK-EDVHHSIISD-LQNGNAETRRRLA 424
R VL AWR EV ++ Y I L +K + + ++++ +G A R R
Sbjct: 1210 RIVLNAWRLIRGEVKLNM---YTIEAVSEAVLRQKVPSIPYKVLTEWFSSGPAGARYRCI 1266
Query: 425 VYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL- 483
Y ++ A L ++ +L I E+ARV G+ +LSRG +V S LLR A +N
Sbjct: 1267 EYVIRRANLNLEIMSQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1326
Query: 484 -VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE 542
+ P +Q S+ V+E + FY+ P+ LDF SLYPS+++AYNLC+ST +
Sbjct: 1327 AISPGNQQVASQPAMECVPLVMEPESAFYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKL 1386
Query: 543 DARKLNL--------------PPECVNKTPSGETFVKSNLQKGILPEILEELLAAR---K 585
K+N + +TP+ +V +++GILP +LEE+L+ R K
Sbjct: 1387 AHLKMNTLGVSSYSLDLDVLQDLNQILQTPNSVMYVPPEVRRGILPRLLEEILSTRIMVK 1446
Query: 586 RAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQM 644
+A L ++ L + + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 1447 KAMKKLTPSEAVLHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1505
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
+E V NA V+YGDTDS+ V TV+ A +G+E A I+
Sbjct: 1506 LEKAISFVN------ANDNWNARVVYGDTDSMFVLLKGRTVKEAFVVGQEIASAITEMNP 1559
Query: 705 KPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTEC 763
P+ L+ EKVY+P L++KKRY G + +P + + + D KGIETVRRD C V + +
Sbjct: 1560 HPVTLKMEKVYHPCFLLTKKRYVGYSYESPNQREPIFDAKGIETVRRDTCEAVAKTMEQS 1619
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVEL 819
L ++I Y+ +L R+ L + K G T D + A + +
Sbjct: 1620 LRLFFEQKNISKVKSYLYRQWKRILSGRVSLQDFIFAKEVRLGTYSTRDSSLLPPAAI-V 1678
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP--IDTHYYLENQ 877
A + K D T P +RVPYV+I GA+ + DP+ +L+ + P ++ YY+ Q
Sbjct: 1679 ATKSMKADPRTEPRYAERVPYVVIHGEPGARLVDMVVDPLVLLDVDTPYRLNDLYYINKQ 1738
Query: 878 ISKPLLRIFEPILKNASKELLSGDH-TRSISISTPSNSGI-----MKFAKRQLSCIGCKA 931
I L R+F + + ++ L TRS P NS + + CI C
Sbjct: 1739 IIPALQRVFGLVGADLNQWFLEMPRLTRSSLGQRPLNSKNSHKTRIDYFYLSKHCILCGE 1798
Query: 932 LIS-NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGS---LHQDVLCTSR 987
++ + LC+ C ++ V + +LE L T C+ C G + V C S
Sbjct: 1799 VVQESAQLCNRCLQNKSAAAATIVWKTSKLEREMQHLATICRHCGGGDWVVQSGVKCNSL 1858
Query: 988 DCPIFYRRKKAQKDM 1002
C +FY R+K QK++
Sbjct: 1859 ACSVFYERRKVQKEL 1873
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQ-------GMGPDDISHFHQILEGRMREAN 171
+IRI+G T G C +H PY YI C + G+ ++ ++ + + N
Sbjct: 46 VIRIYGSTPAGQKTCLHIHRALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGN 105
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVV-----ALPTMVASCRGILDRGIQL 226
SK Q + E+V+ + Y + + F+KI + P VA +L G L
Sbjct: 106 AASKR-QHIHDCEIVRAKKFYGYHSTE-EAFVKIYLYPYSSYHPPDVARAASLLLAGAVL 163
Query: 227 DGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
KS YES++ F L+F++D N+ G + + K+R
Sbjct: 164 G----KSLQPYESHIPFILQFLVDYNLYGMGHVHISKMKFR 200
>gi|42563023|ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|34330129|dbj|BAC82450.1| catalytic subunit of polymerase zeta [Arabidopsis thaliana]
gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
Length = 1890
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 208/675 (30%), Positives = 325/675 (48%), Gaps = 50/675 (7%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK-EDVHHSIISD-LQNGNAETRRRLA 424
R VL AWR EV ++ Y I L +K + + ++++ +G A R R
Sbjct: 1206 RIVLNAWRLIRGEVKLNM---YTIEAVSEAVLRQKVPSIPYKVLTEWFSSGPAGARYRCI 1262
Query: 425 VYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL- 483
Y ++ A L ++ +L I E+ARV G+ +LSRG +V S LLR A +N
Sbjct: 1263 EYVIRRANLNLEIMSQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1322
Query: 484 -VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE 542
+ P +Q S+ V+E + FY+ P+ LDF SLYPS+++AYNLC+ST +
Sbjct: 1323 AISPGNQQVASQPAMECVPLVMEPESAFYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKL 1382
Query: 543 DARKLNL--------------PPECVNKTPSGETFVKSNLQKGILPEILEELLAAR---K 585
K+N + +TP+ +V +++GILP +LEE+L+ R K
Sbjct: 1383 AHLKMNTLGVSSYSLDLDVLQDLNQILQTPNSVMYVPPEVRRGILPRLLEEILSTRIMVK 1442
Query: 586 RAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQM 644
+A L ++ L + + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 1443 KAMKKLTPSEAVLHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1501
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
+E V NA V+YGDTDS+ V TV+ A +G+E A I+
Sbjct: 1502 LEKAISFVN------ANDNWNARVVYGDTDSMFVLLKGRTVKEAFVVGQEIASAITEMNP 1555
Query: 705 KPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTEC 763
P+ L+ EKVY+P L++KKRY G + +P + + + D KGIETVRRD C V + +
Sbjct: 1556 HPVTLKMEKVYHPCFLLTKKRYVGYSYESPNQREPIFDAKGIETVRRDTCEAVAKTMEQS 1615
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVEL 819
L ++I Y+ +L R+ L + K G T D + A + +
Sbjct: 1616 LRLFFEQKNISKVKSYLYRQWKRILSGRVSLQDFIFAKEVRLGTYSTRDSSLLPPAAI-V 1674
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP--IDTHYYLENQ 877
A + K D T P +RVPYV+I GA+ + DP+ +L+ + P ++ YY+ Q
Sbjct: 1675 ATKSMKADPRTEPRYAERVPYVVIHGEPGARLVDMVVDPLVLLDVDTPYRLNDLYYINKQ 1734
Query: 878 ISKPLLRIFEPILKNASKELLSGDH-TRSISISTPSNSGI-----MKFAKRQLSCIGCKA 931
I L R+F + + ++ L TRS P NS + + CI C
Sbjct: 1735 IIPALQRVFGLVGADLNQWFLEMPRLTRSSLGQRPLNSKNSHKTRIDYFYLSKHCILCGE 1794
Query: 932 LIS-NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGS---LHQDVLCTSR 987
++ + LC+ C ++ V + +LE L T C+ C G + V C S
Sbjct: 1795 VVQESAQLCNRCLQNKSAAAATIVWKTSKLEREMQHLATICRHCGGGDWVVQSGVKCNSL 1854
Query: 988 DCPIFYRRKKAQKDM 1002
C +FY R+K QK++
Sbjct: 1855 ACSVFYERRKVQKEL 1869
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQ-------GMGPDDISHFHQILEGRMREAN 171
+IRI+G T G C +H PY YI C + G+ ++ ++ + + N
Sbjct: 46 VIRIYGSTPAGQKTCLHIHRALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGN 105
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVAL-PTMVASCRGILDRGIQLDGLG 230
SK Q + E+V+ + Y + + F+KI ++ P VA +L G L
Sbjct: 106 AASKR-QHIHDCEIVRAKKFYGYHSTE-EAFVKIYLSYHPPDVARAASLLLAGAVLG--- 160
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
KS YES++ F L+F++D N+ G + + K+R
Sbjct: 161 -KSLQPYESHIPFILQFLVDYNLYGMGHVHISKMKFR 196
>gi|301331841|gb|ADK70892.1| U38 [Elephant endotheliotropic herpesvirus 1B]
Length = 1041
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 272/527 (51%), Gaps = 56/527 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + + R + YC+ D+ L +L KL+F + +AR++ + I+
Sbjct: 488 KKHSVSYKQIPVLFRRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISIN 547
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L AK++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 548 KVVFDGQQSRIFTCMLAAAKREGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 605
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T L + T +G FVK +++K IL ++L
Sbjct: 606 FASLYPSIIQAYNLCYCTLITDNYVASLREEDITMVTTNTGRVHRFVKPHVRKSILSQLL 665
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KDPL + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 666 TSWLAERKAVREKLKHCKDPLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 725
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V +V+YGDTDSV V
Sbjct: 726 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVLLC- 784
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 785 -GIENADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 839
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 840 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 899
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPN 833
L NR+D+ L ++ LT+ D Y + H+ + + +R PN
Sbjct: 900 KLVALITDARERLYENRVDIHELQLSATLTQACDKYKQQNLPHLTVVRKKLERREEI-PN 958
Query: 834 VGDRVPYVIIKAAKGAKA-YERSEDPIYVLENNIPIDTHYYLENQIS 879
GDR+ YV++ A Y +EDP YV + + I+ Y N IS
Sbjct: 959 TGDRIFYVLLAHPDERVANYVIAEDPDYVETHRLQINCSKYFSNLIS 1005
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 147/335 (43%), Gaps = 37/335 (11%)
Query: 104 DSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D + E LP S + II + G T +G VC VHG YFY++ D
Sbjct: 133 DVSYEYLPWRYKRFLSPTGTIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATRDA-- 190
Query: 159 FHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG 218
+++ +E++ S V ++ V K S+M + S + I + R
Sbjct: 191 VSKVMSNLEKESSSCSYV------MKSVNKMSLMGFNTNTSSYLMMIFSNHFVGKEAARN 244
Query: 219 ILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQL 278
+ D LD F +E V RF++D W + R+T+K S C+L
Sbjct: 245 LKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD-SNCEL 293
Query: 279 EFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQVANLVT 334
E DC D+ ++ ++ +SFDIEC FP+ T+ D +IQ++ V
Sbjct: 294 ELDCCVGDLQVLRDRVDWPN---YKCMSFDIECLSGSVDDAFPDATNPDDIIIQIS-CVC 349
Query: 335 LQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFD 394
+ +++ TL SCA I GV + +E +++ ++ F+R P+ + GYNI FD
Sbjct: 350 FDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAFD 409
Query: 395 LPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
+PY+I + + ++Q G +R + C K
Sbjct: 410 IPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 439
>gi|155371745|ref|YP_001427279.1| hypothetical protein ATCV1_Z798L [Acanthocystis turfacea Chlorella
virus 1]
gi|155125065|gb|ABT16932.1| hypothetical protein ATCV1_Z798L [Acanthocystis turfacea Chlorella
virus 1]
Length = 902
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 289/512 (56%), Gaps = 25/512 (4%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G+AE R +A Y +D LP +LL KL + EMA +P+
Sbjct: 359 QKDDLPAMKIFEKFEGDAEDRAVIAKYAAQDTLLPLKLLSKLAIFEDVAEMANAVKIPMD 418
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ IP+ K A +G +EGATVLE + G Y +PIA LD
Sbjct: 419 WVGFRGQQVRAFSCLFGKAREMGYAIPDNK-AWPAEGKFEGATVLEPKKGAYFEPIAALD 477
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ T+V + + N+P + +G F S +G++P +L+
Sbjct: 478 FASLYPSIIRAHNMSPETIVM--EPKFANVPGVEYYEIQTGIGKFRYSQKSQGVVPALLD 535
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + +A D ++A+ D Q + K+ NSVYGF GA+ G +PC+ I++
Sbjct: 536 DLAKFRKNAKKLMAQAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFIPCVPIAA 595
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR-- 693
SVT+ GR MI+ + + + V+YGDTDS+MV+ +P + +
Sbjct: 596 SVTATGRNMIDVAARRALELLP-------GSVVVYGDTDSIMVKMKLPEGKDQNNINDHF 648
Query: 694 EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
E A +++G K P LEFEK+YYPY+L SKKRYA + + +P + K+D KG+ VR
Sbjct: 649 EVAKWLAGEITKEYKAPNDLEFEKIYYPYILYSKKRYAAIKFEDPNEKGKVDVKGLALVR 708
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD + ++++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 709 RDFSPITRDILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGYK 767
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAK--GAKAYERSEDPIYVLENNIP 867
E++ H+ +A ++ +R P+ G RVP+V ++ K R+EDP + N +
Sbjct: 768 NEMQ-PHLIVANKILERTGVPVPS-GARVPFVYVEDDDKIDLKQSMRAEDPTFAQNNGLV 825
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+++Q+ KPL+ +F+P++ + KEL
Sbjct: 826 VDRLFYIDHQLLKPLVSLFDPLVDDPEKELFG 857
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 133/305 (43%), Gaps = 41/305 (13%)
Query: 98 IDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS 157
+D+ GD N + I +FG T +G S C ++ F P F + P
Sbjct: 6 VDWRSGDENGQFK---------ITMFGKTVDGKSSCVRIR-FTPSFLLEMPDSWSAPRQR 55
Query: 158 HFHQILEGRMR-EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC 216
F I E M+ A ++ +P VQ++S+ + KS+ + A PTM A
Sbjct: 56 LF--ITETVMKYGAIKDMCLP--------VQRKSLWGFDNGKSRNMAQF--AFPTMEAMR 103
Query: 217 RGILDRGIQLDGLGMK-SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSY 275
+ G+K + YES+V +R + W+ V + +S
Sbjct: 104 KA---------KYGLKGNHQVYESSVDPIIRLFHLRKLSPSGWVRV--SQSYPAMTRVSR 152
Query: 276 CQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLV 333
C +E +C ++ + + P I S+DIE R+ FP ++ D V Q+A
Sbjct: 153 CDVEIECNFTQV----GPSDVVTTPPLVIASWDIETYSRERKFPLASNPDDYVTQIATSF 208
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
GE +PF R V L A + GV+++S E DV+ AW D I + DV+IGYN+ ++
Sbjct: 209 QRYGEAEPFKRVVFCLNDTADVQGVEIVSCSQEADVINAWMDAITKEKTDVLIGYNVFQY 268
Query: 394 DLPYL 398
D Y+
Sbjct: 269 DWKYV 273
>gi|299755533|ref|XP_002912108.1| REV3 [Coprinopsis cinerea okayama7#130]
gi|298411267|gb|EFI28614.1| REV3 [Coprinopsis cinerea okayama7#130]
Length = 1574
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 204/631 (32%), Positives = 307/631 (48%), Gaps = 53/631 (8%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R+ Y K + + +L++ + E ARV G+ ++SRG KV S +LR AK +
Sbjct: 923 RVFDYLQKKSCMVLEILEETEVVTKTAEFARVFGIDFFSVISRGSQFKVESFMLRIAKPE 982
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
+ V+ P+ G + ++E + FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 983 SFVLISPSKADVGKQNAAECMPLIMEPNSAFYTSPMIVLDFQSLYPSVMIAYNYCYSTCL 1042
Query: 540 T---------PEDARKLNLP-------PECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
KLNLP + + P+G +VKS +++G+L +L ELL
Sbjct: 1043 GRVHHFQGTWKFGVDKLNLPEGLLGYLKDDITVAPNGIMYVKSKVRQGLLGRMLTELLDT 1102
Query: 584 RKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K +K K D K VLD RQLALK AN YG+T AT G++P +EI+ S+ G
Sbjct: 1103 RVMVKQAMKGVKNDKALKRVLDARQLALKFIANVTYGYTSATFSGRMPAVEIADSIVQTG 1162
Query: 642 RQMIEHTK--KLVEDKFTTVGGYE------------HNAEVIYGDTDSVMVQFGVPTVEA 687
R+ +E K +L T GY+ NA+V+YGDTDS+ + T E
Sbjct: 1163 RETLEKVKPGRLEVSSKTYDPGYDLQAIMLVNNTKKWNAQVVYGDTDSMFIYLRGRTKEE 1222
Query: 688 AMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK-MDTKGIE 746
A ++G + AD ++ PIKL+FEKVY P +L++KKRY G + + + + D KGIE
Sbjct: 1223 AFRIGHDIADTVTAMNPVPIKLKFEKVYLPCVLMAKKRYVGFKYESIDASEPGFDAKGIE 1282
Query: 747 TVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL-TK 805
TVRRD L + + + L + +D+ Y + + + LL N+ V K +
Sbjct: 1283 TVRRDGVLAQRKMTEKALKLLFRTQDLSQVKDYCQRSWTKLLDNKASPQDFVFAKEVRMG 1342
Query: 806 TGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPI-YVLEN 864
T D V V +A R +D P +R+PYVI K +G + +R+ DP ++ +
Sbjct: 1343 TYSDNGVPPPGVMVAARKMLQDPNYEPQYAERIPYVIAKGERGVRLVDRAMDPTDFLADK 1402
Query: 865 NIPIDTHYYLENQISKPLLRIFEPI---LKNASKEL---LSGDHTRSISIS---TPSNSG 915
+ +D YY+E + PL RIF + +K +EL + D+ I +P
Sbjct: 1403 TLELDAEYYIERVLIPPLERIFNLVGADVKQWYQELPRAVPADNASPKKIRASMSPEKQE 1462
Query: 916 IMKFAKRQLSCIGCKALISNGTLCSHCK--GREAELYCKTVSQVQELEVLFGRLWTQCQE 973
F + C+ C SNG LC C RE E + ++ E C
Sbjct: 1463 TEAF--NPMECLVC-GEPSNGDLCYECHYINRE-ETIANLGALIRRSERRLVTAQLVCAS 1518
Query: 974 CQGSLHQDVL-CTSRDCPIFYRRKKAQKDMA 1003
C GS +++ C S DCP FY R+K +D+A
Sbjct: 1519 CTGSATTELIECESLDCPWFYDREKQDEDLA 1549
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 24/232 (10%)
Query: 98 IDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS 157
IDY +G S L ++ I+R++G + G C +H PYF+I + P ++
Sbjct: 20 IDYTVGPSG-PLDNVNMPVVPILRVYGNSSTGSKTCVHIHQVYPYFFIDYVGSVRPKEVK 78
Query: 158 HFHQILEGRMREA-----NRNSKVP--QFVRHIEMVQKRSIMYYQQQKS-QPFLKIVVAL 209
+ L + A RN + P Q++R +V + + +Y S P+LKI VA
Sbjct: 79 RYIHKLVKSLNHAIALSLKRNPESPKSQYIRAAILV--KGVPFYGFHSSYSPYLKIYVAD 136
Query: 210 PTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT 269
P +V IL GI + F YES++ F L+FM D + G ++++ G R
Sbjct: 137 PALVNRAVTILRSGIVMKA----RFRIYESHLSFPLQFMCDFGLYGCGFLDMEGGWER-- 190
Query: 270 AKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEP 321
C E D ++S + R P S + P I + R P P
Sbjct: 191 ------CNDETDDVHSPLFQRSPHFRQSTL-PLEIDVIAPQILNRHALTPRP 235
>gi|448933248|gb|AGE56805.1| DNA polymerase [Acanthocystis turfacea Chlorella virus NE-JV-2]
Length = 925
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 289/512 (56%), Gaps = 25/512 (4%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G+AE R +A Y +D LP +LL KL + EMA +P+
Sbjct: 382 QKDDLPAMKIFEKFEGDAEDRAVIAKYAAQDTLLPLKLLSKLAIFEDVAEMANAVKIPMD 441
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ IP+ K A +G +EGATVLE + G Y +PIA LD
Sbjct: 442 WVGFRGQQVRAFSCLFGKAREMGYAIPDNK-AWPAEGKFEGATVLEPKKGAYFEPIAALD 500
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ T+V + + N+P + +G F S +G++P +L+
Sbjct: 501 FASLYPSIIRAHNMSPETIVM--EPKFANVPGVEYYEIQTGIGKFRYSQKSQGVVPALLD 558
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + +A D ++A+ D Q + K+ NSVYGF GA+ G +PC+ I++
Sbjct: 559 DLAKFRKNAKKLMAQAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFIPCVPIAA 618
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR-- 693
SVT+ GR MI+ + + + V+YGDTDS+MV+ +P + +
Sbjct: 619 SVTATGRNMIDVAARRALELLP-------GSVVVYGDTDSIMVKMKLPEGKDQNNINDHF 671
Query: 694 EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
E A +++G K P LEFEK+YYPY+L SKKRYA + + +P + K+D KG+ VR
Sbjct: 672 EVAKWLAGEITKEYKAPNDLEFEKIYYPYILYSKKRYAAIKFEDPNEKGKVDVKGLALVR 731
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD + ++++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 732 RDFSPITRDILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGYK 790
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAK--GAKAYERSEDPIYVLENNIP 867
E++ H+ +A ++ +R P+ G RVP+V ++ K R+EDP + N +
Sbjct: 791 NEMQ-PHLIVANKILERTGVPVPS-GARVPFVYVEDDDKIDLKQSMRAEDPTFAQNNGLV 848
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+++Q+ KPL+ +F+P++ + KEL
Sbjct: 849 VDRLFYIDHQLLKPLVSLFDPLVDDPEKELFG 880
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 140/325 (43%), Gaps = 45/325 (13%)
Query: 82 SGYV----SQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVH 137
+GY+ Q I+ +D+ GD N + I +FG T +G S C ++
Sbjct: 9 TGYIRTLRHQFCKIIMDIYPVDWRSGDENGQFK---------ITMFGKTVDGKSSCVRIR 59
Query: 138 GFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQFVRHIEMVQKRSIMYYQQ 196
F P F + P F I E M+ A ++ +P VQ++S+ +
Sbjct: 60 -FTPSFLLEMPDSWSAPRQRLF--ITETVMKYGAIKDMCLP--------VQRKSLWGFDN 108
Query: 197 QKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK-SFMTYESNVLFALRFMIDCNIVG 255
K++ + A PTM A + G+K + YES+V +R +
Sbjct: 109 GKTRNMAQF--AFPTMEAMRKA---------KYGLKGNHQVYESSVDPIIRLFHLRKLSP 157
Query: 256 GNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRK 315
W+ V + +S C +E +C ++ + + P I S+DIE R+
Sbjct: 158 SGWVRV--SQSYPAMTRVSRCDIEVECNFTQV----GPSDVVTTPPLVIASWDIETYSRE 211
Query: 316 GHFPEPTH--DPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAW 373
FP ++ D V Q+A GE +PF R V L A + GV+++S E DV+ AW
Sbjct: 212 RKFPLASNPDDYVTQIATSFQRYGEAEPFKRVVFCLNDTADVQGVEIVSCSQEADVINAW 271
Query: 374 RDFIREVDPDVMIGYNICKFDLPYL 398
D I + DV+IGYN+ ++D Y+
Sbjct: 272 MDAITKEKTDVLIGYNVFQYDWKYI 296
>gi|448936036|gb|AGE59585.1| DNA polymerase [Acanthocystis turfacea Chlorella virus OR0704.3]
Length = 902
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 289/512 (56%), Gaps = 25/512 (4%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G+AE R +A Y +D LP +LL KL + EMA +P+
Sbjct: 359 QKDDLPAMKIFEKFEGDAEDRAVIAKYAAQDTLLPLKLLSKLAIFEDVAEMANAVKIPMD 418
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ IP+ K A +G +EGATVLE + G Y +PIA LD
Sbjct: 419 WVGFRGQQVRAFSCLFGKAREMGYAIPDNK-AWPAEGKFEGATVLEPKKGAYFEPIAALD 477
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ T+V + + N+P + +G F S +G++P +L+
Sbjct: 478 FASLYPSIIRAHNMSPETIVM--EPKFANVPGVEYYEIQTGIGKFRYSQKSQGVVPALLD 535
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + +A D ++A+ D Q + K+ NSVYGF GA+ G +PC+ I++
Sbjct: 536 DLAKFRKNAKKLMAQAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFIPCVPIAA 595
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR-- 693
SVT+ GR MI+ + + + V+YGDTDS+MV+ +P + +
Sbjct: 596 SVTATGRNMIDVAARRALELLP-------GSVVVYGDTDSIMVKMKLPEGKDQNNINDHF 648
Query: 694 EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
E A +++G K P LEFEK+YYPY+L SKKRYA + + +P + K+D KG+ VR
Sbjct: 649 EVAKWLAGEITKEYKAPNDLEFEKIYYPYILYSKKRYAAIKFEDPNEKGKVDVKGLALVR 708
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD + ++++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 709 RDFSPITRDILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGYK 767
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAK--GAKAYERSEDPIYVLENNIP 867
E++ H+ +A ++ +R P+ G RVP+V ++ K R+EDP + N +
Sbjct: 768 NEMQ-PHLIVANKILERTGVPVPS-GARVPFVYVEDDDKIDLKQSMRAEDPTFAQNNGLV 825
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+++Q+ KPL+ +F+P++ + KEL
Sbjct: 826 VDRLFYIDHQLLKPLVSLFDPLVDDPEKELFG 857
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 133/305 (43%), Gaps = 41/305 (13%)
Query: 98 IDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS 157
+D+ GD N + I +FG T +G S C ++ F P F + P
Sbjct: 6 VDWRSGDENGQFK---------ITMFGKTVDGKSSCVRIR-FTPSFLLEMPDSWSAPRQR 55
Query: 158 HFHQILEGRMR-EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC 216
F I E M+ A ++ +P VQ++S+ + KS+ + A PTM A
Sbjct: 56 LF--ITETVMKYGAIKDMCLP--------VQRKSLWGFDNGKSRNMAQF--AFPTMEAMR 103
Query: 217 RGILDRGIQLDGLGMK-SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSY 275
+ G+K + YES+V +R + W+ V + +S
Sbjct: 104 KA---------KYGLKGNHQVYESSVDPIIRLFHLRKLSPSGWVRV--SQSYPAMTRVSR 152
Query: 276 CQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLV 333
C +E +C ++ + + P I S+DIE R+ FP ++ D V Q+A
Sbjct: 153 CDVEIECNFTQV----GPSDVVTTPPLVIASWDIETYSRERKFPLASNPDDYVTQIATSF 208
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
GE +PF R V L A + GV+++S E DV+ AW D I + DV+IGYN+ ++
Sbjct: 209 QRYGEAEPFKRVVFCLNDTAGVPGVEIVSCSQEADVINAWMDAITKEKTDVLIGYNVFQY 268
Query: 394 DLPYL 398
D Y+
Sbjct: 269 DWKYV 273
>gi|448824897|ref|YP_007417829.1| pol [Caviid herpesvirus 2]
gi|324039500|dbj|BAJ78522.1| GP54 [Caviid herpesvirus 2]
gi|444744837|gb|AGE11533.1| pol [Caviid herpesvirus 2]
Length = 1117
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 297/584 (50%), Gaps = 105/584 (17%)
Query: 397 YLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTG 455
YL E K+D+ + I N R + YC+KDA L +RL +KL + + +AR+
Sbjct: 487 YLNEHKDDLSYKEIPPTFLANDNGRAVVGRYCIKDALLVKRLFEKLNYHYEAASVARLAR 546
Query: 456 VPISFLLSRGQSIKVLSQLLRKAKQKNLVIPN---------------------------- 487
+P+ ++ GQ I++ S +L +A ++N+++P+
Sbjct: 547 IPLRSVIFEGQQIRIYSCILEEAGERNMILPSFLTAKRPGELATESSPVASFEEDSEQTS 606
Query: 488 ------VKQAGSEQGT--YEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
V GS G Y+GATVLE GFY+ P+A DFASLYPSI+M +NLCYST +
Sbjct: 607 DSSLGEVSSQGSSDGGVGYQGATVLEPDVGFYDTPVAVFDFASLYPSIIMRHNLCYSTYL 666
Query: 540 --------TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADL 591
+ +D L E + T G FV+ +++K IL E+L LA RK + L
Sbjct: 667 PLGRDDGLSDDDVFLL----EFDDGTRYG--FVREHVRKSILGELLARWLAKRKSVRKVL 720
Query: 592 KEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHT--- 648
E +D +EK +LD QLALK++ N+ YGFTG + G +PC+ I++++T GR M+
Sbjct: 721 AECQDEVEKLILDKYQLALKVTCNAFYGFTGVSSGMMPCLPIAAAITRIGRDMLMSVVDY 780
Query: 649 ------------KKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+ L E+ T G N +VIYGDTDSV V G + ++ G A
Sbjct: 781 VNTYMGHAEFWLRYLGEEDLT---GDALNVKVIYGDTDSVFVICGGVKCGSVLEHGEAIA 837
Query: 697 DYIS-GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
+I+ F +PIKLEFEKV+ ++I KKRY G + K+ KGIE VR+ C
Sbjct: 838 GHITRALFREPIKLEFEKVFVNLMMICKKRYVGRIYGQ----TKLSMKGIELVRKTACEY 893
Query: 756 VKNLVTECLHKILVDRDI-PGAVQYVKSTISD-----------------------LLMNR 791
VK+ V L+ I + D+ GAV+ + T+ D L +NR
Sbjct: 894 VKSTVRNVLNMIFFEDDVSAGAVELSRMTMDDVKRHGVPSGFYRIVEALSNARDELYLNR 953
Query: 792 MDLSLLVITKGLTKTGDDYEVKA-AHVELAERMRKRDAATAPNVGDRVPYVIIK----AA 846
+D+ LV++ L++ Y+ + H+ + +R+ R P+VGDRVPYV+I ++
Sbjct: 954 VDVKKLVLSASLSQEVSAYKQQNLPHLRVIQRLAARREEL-PSVGDRVPYVLIAPPPGSS 1012
Query: 847 KGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL 890
K YE SEDP YV+E+ +P++ Y E+ + K + + PI+
Sbjct: 1013 KNVPNYEISEDPGYVIEHKLPVNGEKYFEH-VVKTVTNVLGPII 1055
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 147/325 (45%), Gaps = 45/325 (13%)
Query: 107 RELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGR 166
R ++P + +IR+FG T +G SVC V G YFY G + L
Sbjct: 128 RHVVPCGN----VIRMFGRTCDGSSVCVNVFGQPSYFYCEYDGSEG-----YLDNYLSTV 178
Query: 167 MREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVA-LPTMVASCRGILDRGIQ 225
++E +K+ F + V K S+ Y + + ++ + P + + RG++
Sbjct: 179 LKETEDVTKI-VFTLDAQRVHKYSLFGYNTKYIENLYRVTLNNWPVCKRLAQNLQSRGLR 237
Query: 226 LDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYS 285
+ YE+ V RF +D I W + Y +++ S+C +E DC
Sbjct: 238 V----------YEAGVDPVARFCVDRKIPSFGWCVIK-RFYARSSGLASFCDIEIDCEIG 286
Query: 286 DIISRHPEGEFSKMA--PFRILSFDIECAGRKGHFPEPT--HDPVIQVANLVTLQGEK-- 339
D+ E + S M+ +R SFDIEC FP+ + D VIQ++ + G
Sbjct: 287 DV-----EADDSDMSWPEYRCASFDIECMSGGDRFPDSSMVDDIVIQISVICYAVGRSGA 341
Query: 340 --------QPFIR---NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGY 388
+ +R ++ TL CAPI G V F +E ++LL + F + PD++ GY
Sbjct: 342 ESDGVSGAEAAVREHQHLFTLGPCAPIPGTHVYEFPSEYELLLGFFIFFKAYSPDILTGY 401
Query: 389 NICKFDLPYLIEK-EDVHHSIISDL 412
NI FD+ YL+++ E ++H+ +S+
Sbjct: 402 NINLFDIKYLLQRMEKIYHANVSEF 426
>gi|347840175|emb|CCD54747.1| similar to DNA polymerase zeta catalytic subunit [Botryotinia
fuckeliana]
Length = 1707
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 206/698 (29%), Positives = 335/698 (47%), Gaps = 78/698 (11%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQN----GNAETR 420
T R ++ WR E++ ++ + + +L+ + H+S +DL+N G A
Sbjct: 1012 TGRHIINIWRAMRAELN---LLQHTLENVAF-HLLHRRIPHYSW-ADLRNWYTNGTARDL 1066
Query: 421 RRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
++ Y + L +L++ I E AR+ GV + SRG KV S + R AK
Sbjct: 1067 SKVLAYYVSHVELNLEILEQTELIPRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKP 1126
Query: 481 KNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
+N ++ P+ KQ G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST
Sbjct: 1127 ENFILISPSRKQVGGQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTY 1186
Query: 539 V-----------------TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELL 581
+ T ED R L L + +N P+G + K N++K +L ++L E+L
Sbjct: 1187 LGRVVNWRGTNKMGFTEYTRED-RLLELLKDHINIAPNGMMYAKPNIRKSLLAKMLGEIL 1245
Query: 582 AARKRAKADLK-EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTS 639
R K+ +K + +D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1246 ETRVMVKSGMKLDKEDKALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQ 1305
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
GR+ +E L+ +V + AEV+YGDTDS+ V + + A +G E A +
Sbjct: 1306 TGRETLEKAIALIH----SVKRW--GAEVVYGDTDSLFVYLKGRSKDEAFDIGNEIAKTV 1359
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKN 758
+ +P+KL+FEKVY+P +L++KKRY G + + + D + D KGIETVRRD +
Sbjct: 1360 TNMNPRPVKLKFEKVYHPCVLLAKKRYVGFKYESKSQIDPEFDAKGIETVRRDGTPAEQK 1419
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHV 817
+ + L + D+ Y + ++ + + + + T + A
Sbjct: 1420 IEEKALKILFRTADLSQVKSYFQEQCDKIMKGSVSIQDFCFAREVKLGTYSNKGPPPAGA 1479
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLE-NNIPIDTHYYLEN 876
++ + DA T P G+RVPYV++ A GA+ +R P +L ++ +D YY+
Sbjct: 1480 LISTKKMLEDARTEPQYGERVPYVVVTGAPGARLIDRCVAPEELLNSDHSELDAEYYISK 1539
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPS---------------------NSG 915
+ PL RIF L G + RS TP N
Sbjct: 1540 NLIPPLERIFN----------LMGANVRSWYDETPKVQRVRRLEVNLDQGQLGELAINKK 1589
Query: 916 IMKFAKRQLSCIGCK-ALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQEC 974
++ + SC+ CK L + G LC C+ E +++ E F + + CQ C
Sbjct: 1590 TLESYMKSSSCLVCKDKLETEGFLCPECQSNAPESMLSLQTRLNIEEKKFLDIQSVCQGC 1649
Query: 975 QG-SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDR 1011
G S ++V C S DCP+FY R + + A+L+ +R
Sbjct: 1650 SGLSPLEEVKCDSMDCPVFYTRTRQR-----ARLKTER 1682
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 49/212 (23%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI-SHFHQI---------LEGRMR 168
+IR+FG T G VC +HG PY YI + P ++ S+ H++ + R
Sbjct: 42 VIRVFGSTETGQKVCAHIHGAFPYLYIEYEGSLDPHEVGSYIHRLHLSIDYALAVSYRRN 101
Query: 169 EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLD 227
+ N+K FV I +V +++ +Y F LKI + P ++ IL +G +
Sbjct: 102 AYDGNAK---FVARITLV--KAVPFYGFHVGYRFYLKIYMLNPVVMTRLADILRQGTVMK 156
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV-------PVGKYRKTAKTL------- 273
+ F YE+++ F L++M D N+ G +I+ PV Y +T+ ++
Sbjct: 157 ----RVFQPYEAHLQFLLQWMADYNLYGCGYIDSSKATFRGPVPLYNETSSSMHLWHDRS 212
Query: 274 ---------------SYCQLEFDCLYSDIISR 290
S+C LE D +I++R
Sbjct: 213 IPDQLITNDVYLPRVSHCSLEVDICVQNILNR 244
>gi|154291721|ref|XP_001546441.1| hypothetical protein BC1G_15151 [Botryotinia fuckeliana B05.10]
Length = 1710
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 209/700 (29%), Positives = 337/700 (48%), Gaps = 82/700 (11%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQN----GNAETR 420
T R ++ WR E++ ++ + + +L+ + H+S +DL+N G A
Sbjct: 1015 TGRHIINIWRAMRAELN---LLQHTLENVAF-HLLHRRIPHYSW-ADLRNWYTNGTARDL 1069
Query: 421 RRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
++ Y + L +L++ I E AR+ GV + SRG KV S + R AK
Sbjct: 1070 SKVLAYYVSHVELNLEILEQTELIPRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKP 1129
Query: 481 KNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
+N ++ P+ KQ G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST
Sbjct: 1130 ENFILISPSRKQVGGQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTY 1189
Query: 539 V-----------------TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELL 581
+ T ED R L L + +N P+G + K N++K +L ++L E+L
Sbjct: 1190 LGRVVNWRGTNKMGFTEYTRED-RLLELLKDHINIAPNGMMYAKPNIRKSLLAKMLGEIL 1248
Query: 582 AARKRAKADLK-EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTS 639
R K+ +K + +D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1249 ETRVMVKSGMKLDKEDKALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQ 1308
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
GR+ +E L+ +V + AEV+YGDTDS+ V + + A +G E A +
Sbjct: 1309 TGRETLEKAIALIH----SVKRW--GAEVVYGDTDSLFVYLKGRSKDEAFDIGNEIAKTV 1362
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKN 758
+ +P+KL+FEKVY+P +L++KKRY G + + + D + D KGIETVRRD +
Sbjct: 1363 TNMNPRPVKLKFEKVYHPCVLLAKKRYVGFKYESKSQIDPEFDAKGIETVRRDGTPAEQK 1422
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA---A 815
+ + L + D+ Y + ++ + + + + K G Y K A
Sbjct: 1423 IEEKALKILFRTADLSQVKSYFQEQCDKIMKGSVSIQDFCFAREV-KLG-TYSNKGPPPA 1480
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLE-NNIPIDTHYYL 874
++ + DA T P G+RVPYV++ A GA+ +R P +L ++ +D YY+
Sbjct: 1481 GALISTKKMLEDARTEPQYGERVPYVVVTGAPGARLIDRCVAPEELLNSDHSELDAEYYI 1540
Query: 875 ENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPS---------------------N 913
+ PL RIF L G + RS TP N
Sbjct: 1541 SKNLIPPLERIFN----------LMGANVRSWYDETPKVQRVRRLEVNLDQGQLGELAIN 1590
Query: 914 SGIMKFAKRQLSCIGCK-ALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQ 972
++ + SC+ CK L + G LC C+ E +++ E F + + CQ
Sbjct: 1591 KKTLESYMKSSSCLVCKDKLETEGFLCPECQSNAPESMLSLQTRLNIEEKKFLDIQSVCQ 1650
Query: 973 ECQG-SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDR 1011
C G S ++V C S DCP+FY R + + A+L+ +R
Sbjct: 1651 GCSGLSPLEEVKCDSMDCPVFYTRTRQR-----ARLKTER 1685
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 49/212 (23%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI-SHFHQI---------LEGRMR 168
+IR+FG T G VC +HG PY YI + P ++ S+ H++ + R
Sbjct: 45 VIRVFGSTETGQKVCAHIHGAFPYLYIEYEGSLDPHEVGSYIHRLHLSIDYALAVSYRRN 104
Query: 169 EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLD 227
+ N+K FV I +V +++ +Y F LKI + P ++ IL +G +
Sbjct: 105 AYDGNAK---FVARITLV--KAVPFYGFHVGYRFYLKIYMLNPVVMTRLADILRQGTVMK 159
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV-------PVGKYRKTAKTL------- 273
+ F YE+++ F L++M D N+ G +I+ PV Y +T+ ++
Sbjct: 160 ----RVFQPYEAHLQFLLQWMADYNLYGCGYIDSSKATFRGPVPLYNETSSSMHLWHDRS 215
Query: 274 ---------------SYCQLEFDCLYSDIISR 290
S+C LE D +I++R
Sbjct: 216 IPDQLITNDVYLPRVSHCSLEVDICVQNILNR 247
>gi|448926077|gb|AGE49655.1| DNA polymerase [Acanthocystis turfacea Chlorella virus Can0610SP]
Length = 902
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 289/512 (56%), Gaps = 25/512 (4%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G+AE R +A Y +D LP +LL KL + EMA +P+
Sbjct: 359 QKDDLPAMKIFEKFEGDAEDRAVIAKYAAQDTLLPLKLLSKLAIFEDVAEMANAVKIPMD 418
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ IP+ K A +G +EGATVLE + G Y +PIA LD
Sbjct: 419 WVGFRGQQVRAFSCLFGKAREMGYAIPDNK-AWPAEGKFEGATVLEPKKGAYFEPIAALD 477
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ T+V + + N+P + +G F S +G++P +L+
Sbjct: 478 FASLYPSIIRAHNMSPETIVM--EPKFANVPGVEYYEIQTGIGKFRYSQKSQGVVPALLD 535
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + +A D ++A+ D Q + K+ NSVYGF GA+ G +PC+ I++
Sbjct: 536 DLAKFRKNAKKLMAQAHKDGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFIPCVPIAA 595
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR-- 693
SVT+ GR MI+ + + + V+YGDTDS+MV+ +P + +
Sbjct: 596 SVTATGRNMIDVAARRALELLP-------GSVVVYGDTDSIMVKMKLPEGKDQNNINDHF 648
Query: 694 EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
E A +++G K P LEFEK+YYPY+L SKKRYA + + +P + K+D KG+ VR
Sbjct: 649 EVAKWLAGEITKEYKAPNDLEFEKIYYPYILYSKKRYAAIKFEDPNEKGKVDVKGLALVR 708
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD + ++++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 709 RDFSPITRDILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGYK 767
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAK--GAKAYERSEDPIYVLENNIP 867
E++ H+ +A ++ +R P+ G RVP+V ++ K R+EDP + N +
Sbjct: 768 NEMQ-PHLIVANKILERTGVPVPS-GARVPFVYVEDDDKIDLKQSMRAEDPTFAQNNGLV 825
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+++Q+ KPL+ +F+P++ + KEL
Sbjct: 826 VDRLFYIDHQLLKPLVSLFDPLVDDPEKELFG 857
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 133/305 (43%), Gaps = 41/305 (13%)
Query: 98 IDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS 157
+D+ GD N + I +FG T +G S C ++ F P F + P
Sbjct: 6 VDWRSGDENGQFK---------ITMFGKTVDGKSSCVRIR-FTPSFLLEMPDSWSAPRQR 55
Query: 158 HFHQILEGRMR-EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC 216
F I E M+ A ++ +P VQ++S+ + K++ + A PTM A
Sbjct: 56 LF--ITETVMKYGAIKDMCLP--------VQRKSLWGFDNGKTRNMAQF--AFPTMEAMR 103
Query: 217 RGILDRGIQLDGLGMK-SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSY 275
+ G+K + YES+V +R + W+ V + +S
Sbjct: 104 KA---------KYGLKGNHQVYESSVDPIIRLFHLRKLSPSGWVRV--SQSYPAMTRVSR 152
Query: 276 CQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLV 333
C +E +C ++ + + P I S+DIE R+ FP ++ D V Q+A
Sbjct: 153 CDVEIECNFTQV----GPSDVVTTPPLVIASWDIETYSRERKFPLASNPDDYVTQIATSF 208
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
GE +PF R V L A + GV+++S E DV+ AW D I + DV+IGYN+ ++
Sbjct: 209 QRYGEAEPFKRVVFCLNDTAGVPGVEIVSCSQEADVINAWMDAITKEKTDVLIGYNVFQY 268
Query: 394 DLPYL 398
D Y+
Sbjct: 269 DWKYV 273
>gi|213159260|ref|YP_002321247.1| GP54 [Caviid herpesvirus 2]
gi|226693520|sp|Q69025.2|DPOL_GPCMV RecName: Full=DNA polymerase
Length = 1117
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 297/584 (50%), Gaps = 105/584 (17%)
Query: 397 YLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTG 455
YL E K+D+ + I N R + YC+KDA L +RL +KL + + +AR+
Sbjct: 487 YLNEHKDDLSYKEIPPTFLANDNGRAVVGRYCIKDALLVKRLFEKLNYHYEAASVARLAR 546
Query: 456 VPISFLLSRGQSIKVLSQLLRKAKQKNLVIPN---------------------------- 487
+P+ ++ GQ I++ S +L +A ++N+++P+
Sbjct: 547 IPLRSVIFEGQQIRIYSCILEEAGERNMILPSFLTAKRPGELATESSPVASFEEDSEQTS 606
Query: 488 ------VKQAGSEQGT--YEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
V GS G Y+GATVLE GFY+ P+A DFASLYPSI+M +NLCYST +
Sbjct: 607 DSSLGEVSSQGSSDGGVGYQGATVLEPDVGFYDTPVAVFDFASLYPSIIMRHNLCYSTYL 666
Query: 540 --------TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADL 591
+ +D L E + T G FV+ +++K IL E+L LA RK + L
Sbjct: 667 PLGRDDGLSDDDVFLL----EFDDGTRYG--FVREHVRKSILGELLARWLAKRKSVRKVL 720
Query: 592 KEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHT--- 648
E +D +EK +LD QLALK++ N+ YGFTG + G +PC+ I++++T GR M+
Sbjct: 721 AECQDEVEKLILDKYQLALKVTCNAFYGFTGVSSGMMPCLPIAAAITRIGRDMLMSVVDY 780
Query: 649 ------------KKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+ L E+ T G N +VIYGDTDSV V G + ++ G A
Sbjct: 781 VNTYMGHAEFWLRYLGEEDLT---GDALNVKVIYGDTDSVFVICGGVKCGSVLEHGEAIA 837
Query: 697 DYIS-GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
+I+ F +PIKLEFEKV+ ++I KKRY G + K+ KGIE VR+ C
Sbjct: 838 GHITRALFREPIKLEFEKVFVNLMMICKKRYVGRIYGQ----TKLSMKGIELVRKTACEY 893
Query: 756 VKNLVTECLHKILVDRDI-PGAVQYVKSTISD-----------------------LLMNR 791
VK+ V L+ I + D+ GAV+ + T+ D L +NR
Sbjct: 894 VKSTVRNVLNMIFFEDDVSAGAVELSRMTMDDVKRHGVPSGFYRIVEALSNARDELYLNR 953
Query: 792 MDLSLLVITKGLTKTGDDYEVKA-AHVELAERMRKRDAATAPNVGDRVPYVIIK----AA 846
+D+ LV++ L++ Y+ + H+ + +R+ R P+VGDRVPYV+I ++
Sbjct: 954 VDVKKLVLSASLSQEVSAYKQQNLPHLRVIQRLAARREEL-PSVGDRVPYVLIAPPPGSS 1012
Query: 847 KGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL 890
K YE SEDP YV+E+ +P++ Y E+ + K + + PI+
Sbjct: 1013 KNVPNYEISEDPGYVIEHKLPVNGEKYFEH-VVKTVTNVLGPII 1055
Score = 106 bits (264), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 147/325 (45%), Gaps = 45/325 (13%)
Query: 107 RELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGR 166
R ++P + +IR+FG T +G SVC V G YFY G + L
Sbjct: 128 RHVVPCGN----VIRMFGRTCDGSSVCVNVFGQPSYFYCEYDGSEG-----YLDNYLSTV 178
Query: 167 MREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVA-LPTMVASCRGILDRGIQ 225
++E +K+ F + V K S+ Y + + ++ + P + + RG++
Sbjct: 179 LKETEDVTKI-VFTLDAQRVHKYSLFGYNTKYIENLYRVTLNNWPVCKRLAQNLQSRGLR 237
Query: 226 LDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYS 285
+ YE+ V RF +D I W + Y +++ S+C +E DC
Sbjct: 238 V----------YEAGVDPVARFCVDRKIPSFGWCVIK-RFYARSSGLASFCDIEIDCEIG 286
Query: 286 DIISRHPEGEFSKMA--PFRILSFDIECAGRKGHFPEPT--HDPVIQVANLVTLQGEK-- 339
D+ E + S M+ +R SFDIEC FP+ + D VIQ++ + G
Sbjct: 287 DV-----EADDSDMSWPEYRCASFDIECMSGGDRFPDSSMVDDIVIQISVICYAVGRSGA 341
Query: 340 --------QPFIR---NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGY 388
+ +R ++ TL CAPI G V F +E ++LL + F + PD++ GY
Sbjct: 342 ESDGVSGAEAAVREHQHLFTLGPCAPIPGTHVYEFPSEYELLLGFFIFFKAYPPDILTGY 401
Query: 389 NICKFDLPYLIEK-EDVHHSIISDL 412
NI FD+ YL+++ E ++H+ +S+
Sbjct: 402 NINLFDIKYLLQRMEKIYHANVSEF 426
>gi|448925748|gb|AGE49327.1| DNA polymerase [Acanthocystis turfacea Chlorella virus Br0604L]
Length = 902
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 289/512 (56%), Gaps = 25/512 (4%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G+AE R +A Y +D LP +LL KL + EMA +P+
Sbjct: 359 QKDDLPAMKIFEKFEGDAEDRAVIAKYAAQDTLLPLKLLSKLAIFEDVAEMANAVKIPMD 418
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ IP+ K A +G +EGATVLE + G Y +PIA LD
Sbjct: 419 WVGFRGQQVRAFSCLFGKAREMGYAIPDNK-AWPAEGKFEGATVLEPKKGAYFEPIAALD 477
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ T+V + + N+P + +G F S +G++P +L+
Sbjct: 478 FASLYPSIIRAHNMSPETIVM--EPKFANVPGVEYYEIQTGIGKFRYSQKSQGVVPALLD 535
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + +A D ++A+ D Q + K+ NSVYGF GA+ G +PC+ I++
Sbjct: 536 DLAKFRKNAKKLMAQAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFIPCVPIAA 595
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR-- 693
SVT+ GR MI+ + + + V+YGDTDS+MV+ +P + +
Sbjct: 596 SVTATGRNMIDVAARRALELLP-------GSVVVYGDTDSIMVKMKLPEGKDQKNINDHF 648
Query: 694 EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
E A +++G K P LEFEK+YYPY+L SKKRYA + + +P + K+D KG+ VR
Sbjct: 649 EVAKWLAGEITKEYKAPNDLEFEKIYYPYILYSKKRYAAIKFEDPNEKGKVDVKGLALVR 708
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD + ++++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 709 RDFSPITRDILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGYK 767
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAK--GAKAYERSEDPIYVLENNIP 867
E++ H+ +A ++ +R P+ G RVP+V ++ K R+EDP + N +
Sbjct: 768 NEMQ-PHLIVANKILERTGVPVPS-GARVPFVYVEDDDKIDLKQSMRAEDPTFAKNNGLV 825
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+++Q+ KPL+ +F+P+++ KEL
Sbjct: 826 VDRLFYIDHQLLKPLVSLFDPLVEEPEKELFG 857
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 134/305 (43%), Gaps = 41/305 (13%)
Query: 98 IDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS 157
+D+ GD N + I +FG EG S C ++ F P F++ P
Sbjct: 6 VDWRSGDENGQFK---------ITMFGKNVEGKSACVRIR-FTPSFFLEMPDSWSAPRQR 55
Query: 158 HFHQILEGRMR-EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC 216
F I E M+ A ++ +P VQ++S+ + K + + A PTM A
Sbjct: 56 LF--ITETVMKYGAIKDMCLP--------VQRKSLWGFDNGKVRNLAQF--AFPTMEAMR 103
Query: 217 RGILDRGIQLDGLGMK-SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSY 275
+ G+K ++ T+ES+V +R + W+ V + +S
Sbjct: 104 KA---------KYGLKGTYQTFESSVDPIIRLFHLRKLSPSGWVRV--SQSYPAMTRVSR 152
Query: 276 CQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLV 333
C +E +C ++ + + P I S+DIE R+ FP ++ D V Q+A
Sbjct: 153 CDIEVECNFTQV----GPSDVVTTPPLVIASWDIETYSRERKFPLASNPDDYVTQIATSF 208
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
GE +PF R V L A + GV+++S E DV+ AW D I + DV+IGYN+ ++
Sbjct: 209 QRYGEAEPFKRVVFCLNDTAGVPGVEIVSCSQEADVINAWMDAITKEKTDVLIGYNVFQY 268
Query: 394 DLPYL 398
D Y+
Sbjct: 269 DWKYV 273
>gi|1581048|prf||2116347B DNA polymerase
Length = 1094
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 297/584 (50%), Gaps = 105/584 (17%)
Query: 397 YLIE-KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTG 455
YL E K+D+ + I N R + YC+KDA L +RL +KL + + +AR+
Sbjct: 487 YLNEHKDDLSYKEIPPTFLANDNGRAVVGRYCIKDALLVKRLFEKLNYHYEAASVARLAR 546
Query: 456 VPISFLLSRGQSIKVLSQLLRKAKQKNLVIPN---------------------------- 487
+P+ ++ GQ I++ S +L +A ++N+++P+
Sbjct: 547 IPLRSVIFEGQQIRIYSCILEEAGERNMILPSFLTAKRPGELATESSPVASFEEDSEQTS 606
Query: 488 ------VKQAGSEQGT--YEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
V GS G Y+GATVLE GFY+ P+A DFASLYPSI+M +NLCYST +
Sbjct: 607 DSSLGEVSSQGSSDGGVGYQGATVLEPDVGFYDTPVAVFDFASLYPSIIMRHNLCYSTYL 666
Query: 540 --------TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADL 591
+ +D L E + T G FV+ +++K IL E+L LA RK + L
Sbjct: 667 PLGRDDGLSDDDVFLL----EFDDGTRYG--FVREHVRKSILGELLARWLAKRKSVRKVL 720
Query: 592 KEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHT--- 648
E +D +EK +LD QLALK++ N+ YGFTG + G +PC+ I++++T GR M+
Sbjct: 721 AECQDEVEKLILDKYQLALKVTCNAFYGFTGVSSGMMPCLPIAAAITRIGRDMLMSVVDY 780
Query: 649 ------------KKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+ L E+ T G N +VIYGDTDSV V G + ++ G A
Sbjct: 781 VNTYMGHAEFWLRYLGEEDLT---GDALNVKVIYGDTDSVFVICGGVKCGSVLEHGEAIA 837
Query: 697 DYIS-GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL 755
+I+ F +PIKLEFEKV+ ++I KKRY G + K+ KGIE VR+ C
Sbjct: 838 GHITRALFREPIKLEFEKVFVNLMMICKKRYVGRIYGQ----TKLSMKGIELVRKTACEY 893
Query: 756 VKNLVTECLHKILVDRDI-PGAVQYVKSTISD-----------------------LLMNR 791
VK+ V L+ I + D+ GAV+ + T+ D L +NR
Sbjct: 894 VKSTVRNVLNMIFFEDDVSAGAVELSRMTMDDVKRHGVPSGFYRIVEALSNARDELYLNR 953
Query: 792 MDLSLLVITKGLTKTGDDYEVKA-AHVELAERMRKRDAATAPNVGDRVPYVIIK----AA 846
+D+ LV++ L++ Y+ + H+ + +R+ R P+VGDRVPYV+I ++
Sbjct: 954 VDVKKLVLSASLSQEVSAYKQQNLPHLRVIQRLAARRPEL-PSVGDRVPYVLIAPPPGSS 1012
Query: 847 KGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL 890
K YE SEDP YV+E+ +P++ Y E+ + K + + PI+
Sbjct: 1013 KNVPNYEISEDPGYVIEHKLPVNGEKYFEH-VVKTVTNVLGPII 1055
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 142/313 (45%), Gaps = 41/313 (13%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+IR+FG T +G SVC V G YFY G + L ++E +K+
Sbjct: 136 VIRMFGRTCDGSSVCVNVFGQPSYFYCEYDGSEG-----YLDNYLSTVLKETEDVTKI-V 189
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVA-LPTMVASCRGILDRGIQLDGLGMKSFMTY 237
F + V K S+ Y + + ++ + P + + RG+++ Y
Sbjct: 190 FTLDAQRVHKYSLFGYNTKYIENLYRVTLNNWPVCKRLAQNLQSRGLRV----------Y 239
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFS 297
E+ V RF +D I W + Y +++ S+C +E DC D+ E + S
Sbjct: 240 EAGVDPVARFCVDRKIPSFGWCVIK-RFYARSSGLASFCDIEIDCEIGDV-----EADDS 293
Query: 298 KMA--PFRILSFDIECAGRKGHFPEPT--HDPVIQVANLVTLQGEK----------QPFI 343
M+ +R SFDIEC FP+ + D VIQ++ + G + +
Sbjct: 294 DMSWPEYRCASFDIECMSGGDRFPDSSMVDDIVIQISVICYAVGRSGAESDGVSGAEAAV 353
Query: 344 R---NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIE 400
R ++ TL CAPI G V F +E ++LL + F + PD++ GYNI FD+ YL++
Sbjct: 354 REHQHLFTLGPCAPIPGTHVYEFPSEYELLLGFFIFFKAYPPDILTGYNINLFDIKYLLQ 413
Query: 401 K-EDVHHSIISDL 412
+ E ++H+ +S+
Sbjct: 414 RMEKIYHANVSEF 426
>gi|432107870|gb|ELK32927.1| DNA polymerase zeta catalytic subunit [Myotis davidii]
Length = 3123
Score = 275 bits (704), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 203/634 (32%), Positives = 308/634 (48%), Gaps = 72/634 (11%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V PNV+Q
Sbjct: 2488 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPNVQQRSQ 2547
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2548 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEFKF 2607
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2608 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPIMLEEILKTRLMVKQSMKAYK 2667
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIE--------------------- 632
D +LD RQL LK+ AN +G+T A G++PCIE
Sbjct: 2668 QDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIERGMERDRESETSMREKHRSAA 2727
Query: 633 -------------ISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQ 679
+ S+ R+ +E KLV D T G A V+YGDTDS+ V
Sbjct: 2728 SCTSTTGDVPATQVGDSIVHKARETLERAIKLVND--TKKWG----ARVVYGDTDSMFVL 2781
Query: 680 FGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFD 738
T E + K+G+E A+ ++ T KP+KL+FEKVY P +L +KKRY G +Y T +K
Sbjct: 2782 LKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYETLDQKDP 2841
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLV 798
D KGIETVRRD+C V ++ L + RDI QYV+ L+ + + +
Sbjct: 2842 VFDAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVQRQCMKLMEGKASIQDFI 2901
Query: 799 ITKGLTKTGDDYEVKAA--HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSE 856
K + Y+ A +EL +M D + P VG+RVPYVII G +
Sbjct: 2902 FAKEY-RGSSSYKPGACVPALELTRKMLTYDRRSEPRVGERVPYVIIYGTPGVPLIQLVR 2960
Query: 857 DPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPS 912
P+ +L++ + ++ YY+ QI PL R+F I + N EL S S S P
Sbjct: 2961 HPMELLQDPTLRLNATYYITKQILPPLARVFSLIGIDVFNWYHELPRIQKATSSSRSDPE 3020
Query: 913 N-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQC 971
G + L C C L +G +CS C+ + + +++ELE +L C
Sbjct: 3021 GRKGTISQYFTTLHCPVCDDLTQHG-VCSKCRSQPQHVAVILNQEIRELERKQEQLVKIC 3079
Query: 972 QECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ C G + + C S +CP+ ++ + +++++A
Sbjct: 3080 KNCTGCFDRHIPCVSLNCPVLFKLSRVNRELSKA 3113
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP-QFVRHIEMVQ 187
G C +HG PY Y+ G G S+ Q+ R N P +H+ V
Sbjct: 6 GQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGTPSSTTQHVFKVS 64
Query: 188 KRSIM--YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFAL 245
S M Y +K + F+KI + P MV +L G ++ K + +E+++ + L
Sbjct: 65 LVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHEAHIPYLL 120
Query: 246 RFMIDCNIVGGNWIEVPVGKYRKTAK 271
+ ID N+ G N I + K+RK +
Sbjct: 121 QLFIDYNLYGMNLINLAAVKFRKARR 146
>gi|348531132|ref|XP_003453064.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Oreochromis
niloticus]
Length = 3036
Score = 275 bits (704), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 195/610 (31%), Positives = 299/610 (49%), Gaps = 56/610 (9%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGS 493
+LL + I E+AR+ G+ +L+RG +V S +LR AK N V P+++Q
Sbjct: 2433 QLLQQHDIIGRTSELARLFGIQFFHVLTRGSQYRVESMMLRVAKPLNYVPVTPSIQQRAQ 2492
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-------LVTPEDAR- 545
++ V+E + FY + LDF SLYPSI++AYN C+ST L TP++ +
Sbjct: 2493 QRAPQCIPLVMEPESRFYSNSVVVLDFQSLYPSIVIAYNYCFSTCLGHVDNLGTPDEFKF 2552
Query: 546 ---KLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PPE + +P G FVKS+++KG+LP +LEE+L R K +K K
Sbjct: 2553 GCTSLRVPPELLYQLRNDITVSPGGIAFVKSSVRKGVLPMMLEEILNTRIMVKQSMKTYK 2612
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++P +E+ S+ R+ +E ++V
Sbjct: 2613 QDKALTKLLDARQLGLKLIANVTFGYTAANYSGRMPSVEVGDSIVHKARETLERAIRMVN 2672
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D + A V+YGDTDS+ V T E A K+G+E A+ ++ T KPIKL+FEK
Sbjct: 2673 DT------KKWGARVVYGDTDSMFVLLKGATKEQAFKIGKEIAEAVTATNPKPIKLKFEK 2726
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y + +K D KGIETVRRD C V ++ + + RD
Sbjct: 2727 VYLPCVLQTKKRYVGYMYESLDQKEPVFDAKGIETVRRDGCPAVSKILERSIKLLFETRD 2786
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I Q+V+ +L R + L K +G Y A +EL RM D
Sbjct: 2787 ISQVKQFVQRQCVKILDGRASIQDLTFAKEYRGSG-SYRPGACIPALELTRRMMAYDRRL 2845
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFE-- 887
P V +RVPYVI+ G + P VL++ + ++ YY+ QI PL R+F+
Sbjct: 2846 EPRVSERVPYVIVYGTPGVPLIQLVRRPTEVLQDPTLRLNATYYITKQILPPLARMFQLI 2905
Query: 888 -----------PILKNAS-KELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN 935
P ++ AS ++ G+ G + L C C L
Sbjct: 2906 GVDVFSWYQELPRIQKASCSSVVGGEEA--------GRKGTISQYFTTLHCPVCDELTQL 2957
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
G +CS C+ + +++ E +L C+ C G + V C S +CP+ Y+
Sbjct: 2958 G-VCSRCRAEPQRVTVTLYQDMRQWESQQEQLLKICRNCSGCAERQVPCVSLNCPVLYKL 3016
Query: 996 KKAQKDMAEA 1005
+ + +++A
Sbjct: 3017 SRVNRQLSKA 3026
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP- 177
++RIFG T G C +HG PY Y+ G + Q+ R N P
Sbjct: 37 VVRIFGSTPAGQKTCLHLHGVFPYIYVPY-DNYGQQPERYLRQVAFSIDRALNVAMGNPT 95
Query: 178 ---QFVRHIEMVQKRSIMYYQ-QQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
Q V + +V + YY K + F+KI + P MV +L G ++ KS
Sbjct: 96 SNNQHVFKVVLVS--GMPYYGYHAKEKLFMKIYLYNPQMVKRVCELLQSGAVMN----KS 149
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+ +E ++ + L+ ID N+ G N + + K+R + K
Sbjct: 150 YQPHEGHIPYLLQLFIDYNLYGMNLVNLAAVKFRSSQK 187
>gi|452986752|gb|EME86508.1| hypothetical protein MYCFIDRAFT_131051 [Pseudocercospora fijiensis
CIRAD86]
Length = 1594
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 193/627 (30%), Positives = 305/627 (48%), Gaps = 48/627 (7%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
RL Y + L +LD I E AR+ GV + SRG KV S + R AK +
Sbjct: 952 RLLDYLITRTRLDLEILDANELIPRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKPE 1011
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-- 537
+ V+ P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST
Sbjct: 1012 SFVLVSPSRKQVGAQNALECLPLVMEPQSAFYSSPLVVLDFQSLYPSVMIAYNYCYSTCL 1071
Query: 538 --LVTPEDARKLN------------LPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
+V KL L + +N +P+G +VK ++K +L ++L E+L
Sbjct: 1072 GRIVNWRGTNKLGFADFQRAPGLLELVQDRLNISPNGMMYVKPEMRKSLLAKMLGEILET 1131
Query: 584 RKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1132 RVMVKSGMKVDKDDRTLQQLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTG 1191
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + +V + AEV+YGDTDS+ V T + A K+G E A ++
Sbjct: 1192 RETLEKAIAFIH----SVERW--GAEVVYGDTDSLFVYLKGRTRDDAFKIGDEIAKAVTD 1245
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLV 760
+P+KL+FEKVY+P +L++KKRY G + +P++ + + D KGIETVRRD + +
Sbjct: 1246 MNPRPVKLKFEKVYHPCVLLAKKRYVGFKYESPKQTEPEFDAKGIETVRRDGTPAEQKIE 1305
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + D+ QY ++ + ++ R+ + K + T D +
Sbjct: 1306 EKALKLLFRTADLSQIKQYFQTQCTKIMAGRVSVQDFCFAKEVKLGTYADKSPPPPGALI 1365
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDP-IYVLENNIPIDTHYYLENQI 878
A + RD P G+RVPYV+I A GA+ +ER +P + + N +D YY+ +
Sbjct: 1366 ATKRMLRDPRMEPQYGERVPYVVIAGAPGARLWERCVEPERLIYDENAELDAEYYISKNL 1425
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLS--------CIGCK 930
PL RIF + N + + I + G + R+ C+ C+
Sbjct: 1426 IPPLERIFNLVGANVRQWFDEMPKVQRIRMLGAQREGEINARGRKTMESYMGSSLCLVCR 1485
Query: 931 ALISNGT---------LCSHCKGREA-ELYCKTVSQVQELEVLFGRLWTQCQECQG-SLH 979
+ LC+ C+ ++ + Q++E L C+ C G +
Sbjct: 1486 TKLDPTEADAEELELPLCAACRYEDSTNTLLALRRKYQKVERKVTDLQDVCKSCAGLAFD 1545
Query: 980 QDVLCTSRDCPIFYRRKKAQKDMAEAK 1006
+V C SRDCP+FY R KA + A+
Sbjct: 1546 DEVRCDSRDCPVFYSRVKANTQLGVAR 1572
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 43/211 (20%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF---------HQILEGRMRE 169
+IR+FG T G VCC + G PY Y+ + + DD++ + H + R
Sbjct: 47 VIRVFGSTETGQKVCCHIRGAFPYLYVPYTESIANDDVARYISTFRHSIDHALALSYRRN 106
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL 229
+ + FV HI +V+ Y FLK+ + P + +L +G L L
Sbjct: 107 PYDDPRKATFVAHISLVKGVPFFGYNVGHKY-FLKVYLLNPLHMTRFSDLLQQGAILRQL 165
Query: 230 GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL---------------- 273
F YE+++ + L++M D N+ G +IE ++R
Sbjct: 166 ----FQPYEAHLQYLLQWMCDFNLYGCAYIESKKPRFRAPLPAWEELDDPAHLWHDHSIL 221
Query: 274 -------------SYCQLEFDCLYSDIISRH 291
S+CQLE D DI++R+
Sbjct: 222 PRNVLDADKFPRQSHCQLELDLCVEDILNRN 252
>gi|82062616|sp|Q9DKT8.1|DPOL_ELHVK RecName: Full=DNA polymerase catalytic subunit
gi|11935168|gb|AAG41999.1|AF322977_3 DNA polymerase [Elephantid herpesvirus 1]
Length = 1041
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 272/527 (51%), Gaps = 56/527 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + + R + YC+ D+ L +L KL+F + +AR++ + I+
Sbjct: 488 KKHSVSYKQIPVLFRRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISIN 547
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L A+++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 548 KVVFDGQQSRIFTCMLAAARREGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 605
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T L + T +G FVK +++K IL ++L
Sbjct: 606 FASLYPSIIQAYNLCYCTLITDNYVASLREEDITMVTTNTGRVHRFVKPHVRKSILSQLL 665
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KDPL + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 666 TSWLAERKAVREKLKHCKDPLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 725
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V +V+YGDTDSV V
Sbjct: 726 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVLLC- 784
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 785 -GIENADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 839
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 840 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 899
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPN 833
L NR+D+ L ++ LT+ D Y + H+ + + +R PN
Sbjct: 900 KLVALITDARERLYENRVDIHELQLSATLTQACDKYKQQNLPHLTVVRKKLERREEI-PN 958
Query: 834 VGDRVPYVIIKAAKGAKA-YERSEDPIYVLENNIPIDTHYYLENQIS 879
GDR+ YV++ A Y +EDP YV + + I+ Y N IS
Sbjct: 959 TGDRIFYVLLAHPDERVANYVIAEDPDYVETHRLQINCSKYFSNLIS 1005
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 147/335 (43%), Gaps = 37/335 (11%)
Query: 104 DSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D + E LP S + II + G T +G VC VHG YFY++ D
Sbjct: 133 DVSYEYLPWRYKRFLSPTGTIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATRDA-- 190
Query: 159 FHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG 218
+++ +E++ S V ++ V K S+M + S + I + R
Sbjct: 191 VSKVMSNLEKESSSCSYV------MKSVNKMSLMGFNTNTSSYLMMIFSNHFVGKEAARN 244
Query: 219 ILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQL 278
+ D LD F +E V RF++D W + R+T+K S C+L
Sbjct: 245 LKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD-SNCEL 293
Query: 279 EFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQVANLVT 334
E DC D+ ++ ++ ++FDIEC FP+ T+ D +IQ++ V
Sbjct: 294 ELDCCVGDLQVLRDRVDWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS-CVC 349
Query: 335 LQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFD 394
+ +++ TL SCA I GV + +E +++ ++ F+R P+ + GYNI FD
Sbjct: 350 FDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAFD 409
Query: 395 LPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
+PY+I + + ++Q G +R + C K
Sbjct: 410 IPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 439
>gi|413925536|gb|AFW65468.1| hypothetical protein ZEAMMB73_654352 [Zea mays]
Length = 255
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 173/215 (80%), Gaps = 6/215 (2%)
Query: 5 NGSARKRPPPTPKESWPNKQQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQ 64
+G+A KR P+P P+ + ++++ +DEDVFLDE++L EDE +L++ +++
Sbjct: 46 SGAAAKRVNPSP--GTPHVPPPASAAA-AVEEDMMDEDVFLDESILAEDEAALLM--LQR 100
Query: 65 RQDFASRLAKWARPPLSSGYVSQC-QSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIF 123
+ ASRLA+W RP + + + C +++ FQQL+IDYVIG+S++ELLP SSGSAAI+RIF
Sbjct: 101 DEALASRLARWKRPAIPTDLAAGCSRTVAFQQLEIDYVIGESHKELLPSSSGSAAILRIF 160
Query: 124 GVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHI 183
GVTREGHS+CC+VHGFEPYFYI CP GMGPDDIS FHQ LEGRM+E+NR+S VP+FV+ +
Sbjct: 161 GVTREGHSLCCQVHGFEPYFYIGCPSGMGPDDISRFHQTLEGRMKESNRSSNVPRFVKRV 220
Query: 184 EMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG 218
E+VQK++IM+YQ Q+SQPFLKIVVALPTMVASCRG
Sbjct: 221 ELVQKQTIMHYQTQQSQPFLKIVVALPTMVASCRG 255
>gi|160420028|dbj|BAF93477.1| DNA polymerase [Human herpesvirus 6]
Length = 1012
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 280/536 (52%), Gaps = 52/536 (9%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
EKE + + IS R + YCL+D+ L RL ++ + + E+AR+ V
Sbjct: 452 EKEQLSYKEISKKFISGPSGRAVVGKYCLQDSVLVVRLFKQINYHYEVAEVARLAHVTAR 511
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT-YEGATVLEARAGFYEKPIATL 518
++ GQ K+ +L +AK++N+++P++ + + QG Y+GATVLE + G+Y P
Sbjct: 512 CVVFEGQQKKIFPCILTEAKRRNMILPSMVSSHNRQGIGYKGATVLEPKTGYYVVPTVVF 571
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEI 576
DF SLYPSIMMA+NLCYSTLV E + + ET FVK +++ +L +
Sbjct: 572 DFQSLYPSIMMAHNLCYSTLVLDERQIAGLSESDILTVKLGDETHRFVKPCVRESVLGSL 631
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
L++ LA R+ KA+++ DP+ K +LD +QLALK + NSVYG TGA G LPC+ I++S
Sbjct: 632 LKDWLAKRREVKAEMQNCSDPMMKLLLDKKQLALKTTCNSVYGVTGAAHGLLPCVAIAAS 691
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGY-------------EHNAEVIYGDTDSVMVQFGVP 683
VT GR+M+ T V K + + + EVIYGDTDS+ +
Sbjct: 692 VTCLGREMLCSTVDYVNSKMQSEQFFCEELGLTASDFTGDLKVEVIYGDTDSIFMSVRNM 751
Query: 684 TVEAAMKLGREAADYISGTFIK-PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDT 742
E+ ++ A +I+ K PIKLEFEK+ P +LI KKRY G + F
Sbjct: 752 ANESLRRIAPMIAKHITDRLFKSPIKLEFEKILCPLILICKKRYIGRQDDSLLIF----- 806
Query: 743 KGIETVRRDNCLLVKNLVTECLHKILVDRDI-PGAVQYVKSTIS---------------- 785
KG++ VR+ +C VK +V + + + D ++ AV++ T +
Sbjct: 807 KGVDLVRKTSCDFVKGVVKDIVDLLFFDEEVQTAAVEFSHMTQTQLREQGVPVGIHKILR 866
Query: 786 -------DLLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPNVGDR 837
+L NR D+ L+++ L+K Y + AH+ + R+ +R PNVGDR
Sbjct: 867 RLCKAREELFQNRADVRHLMLSSVLSKEVAAYKQPNLAHLSVIRRLAQRKEEI-PNVGDR 925
Query: 838 VPYVIIKAAKGAKA---YERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL 890
+ YV+I + G K YE +EDP YVLE+ IPI Y + QI K + + PI
Sbjct: 926 IMYVLIAPSTGNKQTHNYELAEDPNYVLEHKIPIHAEKYFD-QIIKAVTNVISPIF 980
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 144/306 (47%), Gaps = 30/306 (9%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
S +IR+FG + +G +C V G E YFY C G + + +L G ++ +
Sbjct: 113 SGTVIRMFGRSEDGEKICVNVFGQEQYFYCECVDGKSLKATIN-NLMLTGEVKMS----- 166
Query: 176 VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
FV IE K S+ Y K V+ S R + + +Q +G F+
Sbjct: 167 -CSFV--IEPADKLSLYGYNANTVVNLFK--VSFGNFYVSQR--IGKILQNEG-----FV 214
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGE 295
YE +V RF +D + W V + K S ++E +C SD++S E
Sbjct: 215 VYEIDVDVLTRFFVDNGFLSFGWYNVKKYIPQDMGKG-SNLEVEINCHVSDLVSL----E 269
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLVTLQGEKQPFIRNVMTLKSCA 353
+ SFDIEC G+ G+FP+ + D VIQ++ +V+ E R++ TL +C
Sbjct: 270 NVNWPLYGCWSFDIECLGQNGNFPDAENLGDIVIQIS-VVSFDTEGDRDERHLFTLGTCE 328
Query: 354 PIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL-IEKEDVHHSII--- 409
I GV + F +E ++LL + F+R P+ + GYNI FDL YL I + ++H I
Sbjct: 329 QIDGVHIYEFASEFELLLGFFIFLRIESPEFITGYNINNFDLKYLCIRMDKIYHYEIGCF 388
Query: 410 SDLQNG 415
S L+NG
Sbjct: 389 SKLKNG 394
>gi|448932259|gb|AGE55819.1| DNA polymerase [Acanthocystis turfacea Chlorella virus MN0810.1]
Length = 902
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 179/519 (34%), Positives = 289/519 (55%), Gaps = 27/519 (5%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G+A R +A Y +D LP +LL KL + EMA +P+
Sbjct: 359 QKDDLPAMKIFEKFEGDANDRAVIAKYAAQDTLLPLKLLSKLAIFEDVAEMANAVKIPVD 418
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ IP+ K A +G +EGATVLE + G Y +PIA LD
Sbjct: 419 WVGFRGQQVRAFSCLFGKAREMGYAIPDNK-AWPAEGKFEGATVLEPKKGAYFEPIAALD 477
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ T+V + + N+P + +G F S +G++P +L+
Sbjct: 478 FASLYPSIIRAHNMSPETIVM--EPKFANVPGVEYYEIQTGIGKFRYSQKSQGVVPALLD 535
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + +A D ++A+ D Q + K+ NSVYGF GA+ G +PC+ I++
Sbjct: 536 DLAKFRKNAKKLMAQAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFIPCVPIAA 595
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVP------TVEAAM 689
SVT+ GR MI+ + + + V+YGDTDS+MV+ +P +
Sbjct: 596 SVTATGRNMIDVAARRALELLP-------GSVVVYGDTDSIMVKMKLPEGKDQDNINDHF 648
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
++ + A I+ + P LEFEK+YYPY+L SKKRYA + + +P + K+D KG+ VR
Sbjct: 649 EVAKWLAGEITKEYKAPNDLEFEKIYYPYILYSKKRYAAIKYEDPAEKGKIDVKGLALVR 708
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD + + ++ E L IL +D P AV+ + I +L N + V++K L KTG
Sbjct: 709 RDFSPITREILQESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTL-KTGYK 767
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGA--KAYERSEDPIYVLENNIP 867
E++ H+ +A ++ R P+ G RVP+V ++ K R+EDP + +N +
Sbjct: 768 NEMQ-PHLIVANKILDRTGVPVPS-GARVPFVYVEDDDNIDLKQSMRAEDPTFAKDNGLV 825
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSI 906
+D +Y+++Q+ KPL+ +F+P++ + KEL HT +
Sbjct: 826 VDRLFYIDHQLLKPLVSLFDPLVDDPEKELFG--HTEVV 862
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 128/283 (45%), Gaps = 32/283 (11%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR-EANRNSKVPQ 178
I +FG T +G S C ++ F P F + P+ F I E M+ A ++ +P
Sbjct: 19 ITMFGKTVDGKSACVRIR-FTPSFLLEMPEAWSEPRQKLF--ITETAMKYGAVKDMCLP- 74
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK-SFMTY 237
V+++S+ + K + + A PTM A + G+K S Y
Sbjct: 75 -------VKRKSLWGFDNGKVRNLAQF--AFPTMEAMRKA---------KYGLKNSHQVY 116
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFS 297
ES+V +R + W+ V + + +S C +E DC ++ + + +
Sbjct: 117 ESSVDPIIRLFHLRKLSPSGWVRV--SQSYPSMTRVSRCDIEVDCNFTQV----GPSDIT 170
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
P I S+DIE R+ FP T+ D V Q+A GE +PF R V L A +
Sbjct: 171 ATPPLVIASWDIETYSRERKFPLATNPEDYVTQIATSFQRYGESEPFKRVVFCLNETADV 230
Query: 356 VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
GVD++S E DV+ AW D I + DV+IGYN+ ++D Y+
Sbjct: 231 PGVDIVSCSQEADVINAWMDAITKEKTDVLIGYNVFQYDWKYI 273
>gi|260946881|ref|XP_002617738.1| hypothetical protein CLUG_03182 [Clavispora lusitaniae ATCC 42720]
gi|238849592|gb|EEQ39056.1| hypothetical protein CLUG_03182 [Clavispora lusitaniae ATCC 42720]
Length = 655
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 193/330 (58%), Gaps = 26/330 (7%)
Query: 75 WARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCC 134
W RPPL + Y + I FQQLD + ++G + R FGVT EGHSV C
Sbjct: 122 WTRPPLPADYTEK--DISFQQLDAEEA-----------NNGDSTAARFFGVTEEGHSVLC 168
Query: 135 KVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYY 194
V GF YFY+ P+G D SH + M+E + IE+V K SI +
Sbjct: 169 NVTGFLHYFYVPVPKGFMRD--SHLAR-FTSHMKENYYG------IHDIEIVLKESIWGF 219
Query: 195 QQQKSQPFLKIVVALPTMVASCRGILDRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNI 253
PF K+VV + RG +RG I + ++ +TY+ N+ + LR MIDC I
Sbjct: 220 NNNMKTPFFKVVVKNAREITKIRGAFERGEISFENFFPQNNVTYD-NINYLLRMMIDCKI 278
Query: 254 VGGNWIEVPVGKYRKTAKTL--SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC 311
G +WI +P G Y A L S CQ+E Y D++S PEGE+ KMAP RI+SFDIEC
Sbjct: 279 TGMSWITLPKGAYTLVAPELKVSTCQVECSIDYKDLVSHAPEGEWLKMAPLRIMSFDIEC 338
Query: 312 AGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLL 371
AGRKG FPE DPVIQ+AN+++ GE +PF+RNV T+ +C+PI+G ++ S E D+L+
Sbjct: 339 AGRKGVFPEAQLDPVIQIANVISKHGESRPFVRNVFTVNTCSPIIGSEIFSHAKEEDMLM 398
Query: 372 AWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
AWR F+ + DPDV+IGYN FDLPYL+++
Sbjct: 399 AWRKFVVKADPDVLIGYNTSNFDLPYLLDR 428
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 121/150 (80%), Gaps = 1/150 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+DLQ G AETRRRLAVYCLKDAYLP RLL+KLM + NY EMARVTGVP S
Sbjct: 504 QKEDVQHSIITDLQEGTAETRRRLAVYCLKDAYLPLRLLEKLMCLVNYTEMARVTGVPFS 563
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LL+RGQ IKV+SQL RK ++N+V+PN++ GS + YEGATV+E G+Y+ PIATLD
Sbjct: 564 YLLARGQQIKVISQLFRKCLEENIVVPNMRSEGSNE-EYEGATVIEPIRGYYDVPIATLD 622
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNL 549
F+SLYPSIMMA+NLCY+TL+ + +
Sbjct: 623 FSSLYPSIMMAHNLCYTTLLNKQSIKAFQF 652
>gi|308163159|gb|EFO65519.1| DNA polymerase delta, catalytic subunit [Giardia lamblia P15]
Length = 1300
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/397 (40%), Positives = 217/397 (54%), Gaps = 50/397 (12%)
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISK 723
H++ VIYGDTDSVMV+FGV + AM L + A+ Y++ +FI+PI LEFEKVY PYLL++K
Sbjct: 896 HDSVVIYGDTDSVMVKFGVDNIMEAMMLAKYASTYVTQSFIRPINLEFEKVYCPYLLLNK 955
Query: 724 KRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKST 783
KRYAG YWTNP K DK+D+KG+E VRRDNC LV ++ + L + D A+ YV+S
Sbjct: 956 KRYAGQYWTNPFKPDKIDSKGLELVRRDNCRLVVIVMEKILDILFNYSDPQKAISYVRSV 1015
Query: 784 ISDLLMNRMDLSLLVITKGLTKTGDDYEVK-AAHVELAERMRKRDAATAPNVGDRVPYVI 842
+ DL+ R+DLSLLVI+K LT++ + Y K HV LA RM +RD TAP VGDRVPYV+
Sbjct: 1016 VHDLISQRIDLSLLVISKALTQSVNSYTNKQQTHVNLAMRMMERDPMTAPKVGDRVPYVV 1075
Query: 843 IKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASK-----EL 897
K K YERSEDP Y + NN+PIDT YYL Q+ KP+ R+ + +L+ +S+ +L
Sbjct: 1076 TLKDKACKLYERSEDPAYAISNNLPIDTDYYLHQQLEKPVCRLLKDVLRCSSEAETADQL 1135
Query: 898 LSGDHTRSISI---------------------------STPSNSGIMKF--AKRQLSCIG 928
G H SI +GIM K+ C+
Sbjct: 1136 FRGKHCVGPSIVFSRGNAGSSMEKFDASGGSLKSAKTTKISKQAGIMGMITGKKVSKCMY 1195
Query: 929 CKALISNG------TLCSHC-KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD 981
C I+NG LC C LY ++ E + + +C C G +
Sbjct: 1196 CNVRITNGKLYEDVMLCKSCLLVNRLSLYSHLQRELLLAEHRYRTVAIECMFCTGEVSSH 1255
Query: 982 --------VLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
+ C+S DC +FY R K + D +++ D
Sbjct: 1256 TGDIEDGLIPCSSSDCELFYARIKTKLDYKALRVKFD 1292
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 162/321 (50%), Gaps = 30/321 (9%)
Query: 122 IFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVR 181
+FG+TR+G SV V GF+ Y Y + P ++ + G VP
Sbjct: 59 LFGITRKGQSVSTVVTGFKHYLYAGTDTFLNPSELQSKLSLHLG--------FDVPGHTS 110
Query: 182 HIEMVQK----RSIMYYQQQKSQPFLKIVVALPTMVASCRGI-LDRGIQLDGLGMKS--F 234
+VQ RSI ++ QK + KI A ++ ++ RG LD I G+++ F
Sbjct: 111 ITSIVQMPNTYRSIYVFRIQKKYIY-KISFADKSLYSAIRGFFLDNNIYNGKHGLRADKF 169
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR-------KTAKTLSYCQLEFDCLYSDI 287
YE+++ +RFM+D + G W+ +P G Y K +T QL+ + YS +
Sbjct: 170 ELYEADLDPTVRFMVDTQLRGFAWVRIPKGAYSPLPSDAPKLLQTTMQIQLQTE--YSSL 227
Query: 288 IS-RHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQ---PFI 343
++ + + ++ AP R+LSFDIE +G FP+ T D +I + + + + + P+
Sbjct: 228 VALDYNDPLYAVNAPIRVLSFDIESVSLQGGFPDATSDYIITICSSLYILAQSTADTPYA 287
Query: 344 RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
+ LKSCAPI G DV FETE ++LLA+ I+ DPD+ GYNI FD Y+ ++ +
Sbjct: 288 NVALVLKSCAPIAGADVFCFETEGELLLAFNYLIQLFDPDLFTGYNIDGFDFNYIFKRAE 347
Query: 404 VHHSIISDLQNGNAETRRRLA 424
+ ++ L G+ ET + L+
Sbjct: 348 IGQVLVQSLP-GSMETDQLLS 367
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 102/151 (67%), Gaps = 10/151 (6%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+DVH+S+I+ L + RRR+ +YC+KD LP +L++KLM + N +E+ RV+G+ S
Sbjct: 445 QKDDVHYSMITPLFMQDEYGRRRITLYCIKDCKLPLKLMEKLMILVNTIELCRVSGLCGS 504
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGS--------EQGTYEGATVLEARAGFY 511
LL GQ I++LS L R + ++ +IP + G+ + EGATVL + GFY
Sbjct: 505 LLLYSGQQIRILSLLYRFSAAESYLIPYRMRTGNGYTGGFSGDSEGLEGATVLNPKRGFY 564
Query: 512 --EKPIATLDFASLYPSIMMAYNLCYSTLVT 540
++PIATLDF SLYP+I++A+NLCYST+++
Sbjct: 565 SDKQPIATLDFNSLYPTIIIAHNLCYSTMIS 595
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 119/208 (57%), Gaps = 21/208 (10%)
Query: 459 SFLLSRGQSIKVLSQLLRKAKQKNL---VIPNVKQAGSEQGTYEGATVLEARAGFYEKPI 515
S ++S + L+Q K++ K L VI KQ S EGA+V
Sbjct: 591 STMISDIPDMDFLAQTYAKSQGKELSSEVISFYKQQLSSLLRLEGASV-----------S 639
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARK------LNLPPECVNKTPSGETFVKSNLQ 569
AT+D + + + + P A+K L+ E + TP F+K +
Sbjct: 640 ATIDETNDSDDFDDSDDSPRYSATKPSSAQKETATLCLSTSNELITVTPIKARFLKRAVF 699
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGA-TVGQL 628
GILP+IL+ LL ARKRAK D+K+A DPL K VL+GRQLALK+ ANS+YGFTGA + G+L
Sbjct: 700 PGILPKILQVLLDARKRAKQDMKKAVDPLAKDVLNGRQLALKLIANSLYGFTGALSFGRL 759
Query: 629 PCIEISSSVTSYGRQMIEHTKKLVEDKF 656
P EISSS+T++GR+MI HTK +VE++F
Sbjct: 760 PSQEISSSITAFGREMITHTKSVVEERF 787
>gi|9629560|ref|NP_044849.1| DNA polymerase catalytic subunit [Murid herpesvirus 4]
gi|6625576|gb|AAF19277.1|AF105037_9 9 [murid herpesvirus 4]
gi|13249151|gb|AAK16702.1|AF324455_6 DNA polymerase catalytic subunit; involved in DNA replication
[Murid herpesvirus 4]
gi|2317930|gb|AAB66388.1| DNA polymerase [murid herpesvirus 4]
Length = 1027
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/522 (32%), Positives = 269/522 (51%), Gaps = 59/522 (11%)
Query: 399 IEKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPI 458
+EKEDV + I L R ++ YC+ D+ L LL M E+ ++ +P+
Sbjct: 462 MEKEDVSYKDIPILFKEGPTGRAKIGTYCVMDSQLVLDLLKYFMAHIEIAEIGKLAKIPV 521
Query: 459 SFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATL 518
+L+ GQ I+V S LL A+++N ++P+ QA Y+GATV++ GFY P+ +
Sbjct: 522 RRVLTDGQQIRVFSSLLDAARRENYILPS-NQAKCSNSGYQGATVIDPITGFYNTPVLVV 580
Query: 519 DFASLYPSIMMAYNLCYSTLV-----------TPEDARKLNLPPECVNKTPSGETFVKSN 567
DFASLYPSI+ A+NLCYST++ TP D LP V+ FVK +
Sbjct: 581 DFASLYPSIIQAHNLCYSTIIPDNKLQMFPNLTPADYETFTLPSGTVH-------FVKKH 633
Query: 568 LQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQ 627
+ +L +L + LA RK + L +DP+ K +LD +QLA+K++ NSVYGFTG G
Sbjct: 634 KKCSLLSRLLTKWLAKRKEIRTQLAACEDPITKTILDKQQLAIKVTCNSVYGFTGVASGM 693
Query: 628 LPCIEISSSVTSYGRQMIEHTKKLVEDKFT-TVGGYEHNA-------EVIYGDTDSVMVQ 679
LPC++I+ ++T GR+M+E ++ +E+ + T+G H VIYGDTDS+ V+
Sbjct: 694 LPCLQIAETITFQGRKMLEKSRAYIENMSSATLGALMHKTYNPDAYFRVIYGDTDSLFVE 753
Query: 680 FGVPTVEAAMKLGREAADYIS-GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
T+E ++ G AD + F++PIKLE EK + L+I+KKRY G N
Sbjct: 754 TQGYTLEEVVEFGEMLADNTTKALFVQPIKLEAEKTFKSLLMITKKRYVGTLSNN----- 808
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVK----------------S 782
K+ KG++ VR+ C V++ + + IL D D+ A Q + S
Sbjct: 809 KLLLKGVDLVRKTACKFVQSATSNVVSLILNDNDVRAAAQTMSNWGKLDVYRRGLPSGFS 868
Query: 783 TISD--------LLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPN 833
+ D L+ N +D+ L T L+K +Y+ H+ + +++ R P
Sbjct: 869 KVIDALNHNHLQLITNSVDIDHLTFTTELSKPLTEYKTTNLPHLAVFKKLVSRQEE-LPQ 927
Query: 834 VGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
+ DR+PYV I ++ + +E P YV + N+ I Y +
Sbjct: 928 IHDRIPYVFIDGSEKGLKSDLAEHPAYVRQQNLRIAHKVYFD 969
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 137/291 (47%), Gaps = 33/291 (11%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN---R 172
S +I + G G SVC V G + YFY P + +L ++E +
Sbjct: 125 SGTVIHLLGKLENGQSVCVNVFGQKIYFYAKAPNSL----------VLSSAIQEVMSQFK 174
Query: 173 NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK 232
+ P F HI +K ++ Y ++ ++ + + + + C + GI+L
Sbjct: 175 GKRGPSF--HITQEEKIPLVTYTEELTKVYKVTLSSSQLLYPICDKLKALGIEL------ 226
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
+E+NV RFMID N W V R++ K S CQLE DC +I HP
Sbjct: 227 ----FETNVDACQRFMIDNNFSTFGWYTCDVADLRQSKKD-SLCQLEIDCGLENI-CHHP 280
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIRNVMTLK 350
E S P+ ILSFDIEC G G FP D +IQ++ VT + + +L
Sbjct: 281 E--LSSWPPYNILSFDIECLGECG-FPCALKEQDCIIQIS-CVTWNCATNSISKLLFSLG 336
Query: 351 SCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+C PI G +V +E D+L+A+ F+R+ + + GYNI FDLPY+I++
Sbjct: 337 TCDPIEGTEVYECPSEYDLLMAFLIFMRDSGVEFISGYNIANFDLPYIIDR 387
>gi|428182003|gb|EKX50865.1| Rev3 DNA polymerase zeta, partial [Guillardia theta CCMP2712]
Length = 736
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 198/681 (29%), Positives = 340/681 (49%), Gaps = 47/681 (6%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK--EDVHHSIISDLQNGNAETRRRLA 424
R++L WR +E+ + N+C L + + HS L + ++ +R++
Sbjct: 67 REILNVWRLCRQEIKLGLYNYTNVCAKVLNKRVPSFPPQLLHSWFQHLASPHS-LKRQVL 125
Query: 425 VYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV 484
+Y L+ A +L+ + + E+ARV G+ +LSRG +V S L R A+ +N +
Sbjct: 126 LYLLEKASNTLLILEAMELVGRTCELARVFGIDFFSVLSRGSQYRVESMLYRLARTQNFL 185
Query: 485 I--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----L 538
+ P+V+Q S+ T V+E ++ FY P+ LDF SLYPS+++AYN+CYST L
Sbjct: 186 LLSPSVQQRQSQPATECIPLVMEPQSAFYSSPVCVLDFRSLYPSVVIAYNMCYSTCLGKL 245
Query: 539 VTPEDARKLNLPPECVNK--------------TPSGETFVKSNLQKGILPEILEELLAAR 584
V P+ + L + + TP+G F+ + ++G+LP +L E+L AR
Sbjct: 246 VEPDSDGNVKLGVSSLRRAPGLLASVREEAIITPNGMAFLPPDKREGVLPRLLREILQAR 305
Query: 585 KRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGR 642
K +K+ ++ L+ RQ LK+ AN YG+T A G++PC +++ ++ GR
Sbjct: 306 VAVKKLMKQVGGDVKLYRTLNSRQFGLKLIANVTYGYTSAGFSGRMPCADLADAIVQTGR 365
Query: 643 QMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT 702
+ +E + VE+ G + A VIYGDTDS+ V+ + E A ++GRE A ++
Sbjct: 366 ETLERAIRTVEE------GRQWGARVIYGDTDSLFVEIPGRSREEAFRIGREIAAAVTAE 419
Query: 703 FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTE 762
P++LE EKVY P ++++KKRY G + +P +D KGIE VRRD+C LV + +
Sbjct: 420 NPAPMELELEKVYQPSMMVAKKRYVGYSYDSPSSKPVLDAKGIEMVRRDSCPLVMRVQEK 479
Query: 763 CLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKT--GDDYEVKAAHVELA 820
L + ++I Y++ D++ + ++++ V K + + AA V
Sbjct: 480 ALKVLFETKNISKLKSYMEGVFMDIIASNLNINEYVFAKEVRQGTYASSTLPPAATVNAT 539
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN--IPIDTHYYLENQI 878
+ + RD +R+PYV++ GA+ + DP +L ++ + I+ YY+ +
Sbjct: 540 KVL--RDPRAGALHAERIPYVVVCGQPGARLVDLVLDPRELLASSGMLRINAQYYITKAL 597
Query: 879 S---KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN 935
+ LL +F ++ EL ++R+ S S+ G ++ + + CI C L S
Sbjct: 598 IPCLERLLSLFGVDIRRWYLEL--PRYSRASSRDHASHEGSIRSHFQSMHCILCDQL-SR 654
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C+ C C ++ +E RL C C GS+ C + DCP+ Y R
Sbjct: 655 TAVCAECTSLPQVALCTMQNRRGRVERDLARLCRICVSCVGSMRLVTGCDAVDCPVLYDR 714
Query: 996 KKAQKDMAEAKLQLDRW--NF 1014
KAQ+ + EA ++D W NF
Sbjct: 715 VKAQQ-LWEASSRID-WGVNF 733
>gi|159127940|gb|EDP53055.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus
fumigatus A1163]
Length = 1656
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 208/672 (30%), Positives = 322/672 (47%), Gaps = 51/672 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y I +L+ + H+S + + Q+G
Sbjct: 968 TGRHMINIWRAMRSELN---LLQYTIENVVF-HLLHRRIPHYSYRDLTAWYQSGKPRDVL 1023
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
++ Y + + +L+ I E AR+ G+ + SRG KV S + R AK +
Sbjct: 1024 KVVQYYVSRIQMNLEILESNELIPRTSEQARLLGIDFFSVFSRGSQFKVESLMFRIAKPE 1083
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ KQ G + V+E ++ FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 1084 NYLLVSPSRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFL 1143
Query: 540 T----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
R L L + VN P+G +VK +++ +L +L E+L
Sbjct: 1144 GRVRLWRGRNKMGFMDYKRQPRVLELLKDKVNIAPNGMMYVKPEVRQSLLARMLAEILET 1203
Query: 584 RKRAKADLKEAKDPLEKAV---LDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTS 639
R KA +K KD +KA+ L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1204 RVMVKAGMKMDKD--DKALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQ 1261
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
GR+ +E L+ +V + AEV+YGDTDS+ V T + A +G E A +
Sbjct: 1262 SGRETLEKAIALIH----SVERW--GAEVVYGDTDSLFVYLKGRTRDEAFGIGEEIAKAV 1315
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+ PIKL+FEKVY+P +L++KKRY G Y +K + D KGIETVRRD +
Sbjct: 1316 TDINPHPIKLKFEKVYHPCVLLAKKRYVGFKYEHRNQKEPEFDAKGIETVRRDGTPAEQK 1375
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHV 817
+ + L + D+ +Y + + ++ R+ + K + T + +
Sbjct: 1376 IEEKALKLLFRTADLTQVKRYFQKQCAKIMQGRVSIQDFCFAKEVRLGTYSERGLLPPGA 1435
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLEN 876
++ R D + P G+RVPYV++ A G++ +R P +L N + +D YY+
Sbjct: 1436 MISTRKMVEDPRSEPQYGERVPYVVVTGAPGSRLVDRCVAPETLLHNAELELDAEYYINK 1495
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAK--------RQLSCIG 928
I PL RIF + N + + I + S K AK + SCI
Sbjct: 1496 NIIPPLERIFNLVGANVRQWYEEMPKIQRIRRIEGAASAAGKDAKGKTLESYMKSSSCIV 1555
Query: 929 CKALISNGTL--CSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCT 985
CK+ + + + CS C + VS+ Q+ E L CQ C G DV+C
Sbjct: 1556 CKSKLDHIGIPVCSDCLQQPHISLLSLVSRQQQAEKRVSDLHRICQSCMGVPSGDDVICD 1615
Query: 986 SRDCPIFYRRKK 997
S+DCP+FY R +
Sbjct: 1616 SKDCPVFYSRTR 1627
>gi|343963228|gb|AEM72532.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 273/527 (51%), Gaps = 56/527 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + + R + YC+ D+ L +L KL+F + +AR++ + ++
Sbjct: 494 KKHSVPYKQIPVLFRRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMN 553
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L A+++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 554 KVIFDGQQSRIFTCMLAAARREGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 611
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T D L + T +G FVK +++K IL ++L
Sbjct: 612 FASLYPSIIQAYNLCYCTLITDNDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLL 671
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KD L + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 672 TSWLAERKAVREKLKHCKDSLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 731
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V + +V+YGDTDSV V
Sbjct: 732 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNKFKIDVVYGDTDSVFVLLC- 790
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 791 -GIEDADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 845
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 846 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 905
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPN 833
L NR+D+ L ++ LT+ D Y + H+ + + +R PN
Sbjct: 906 KLVALITDARERLYENRVDIHELQLSATLTQACDKYKQQNLPHLTVVRKKLERREEI-PN 964
Query: 834 VGDRVPYVIIKAAKGAKA-YERSEDPIYVLENNIPIDTHYYLENQIS 879
GDR+ YV++ A Y +EDP YV + + I+ Y N IS
Sbjct: 965 TGDRIFYVLLAHPDERVANYVIAEDPDYVETHRLQINCSKYFSNLIS 1011
Score = 96.7 bits (239), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 153/340 (45%), Gaps = 39/340 (11%)
Query: 100 YVIGDSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPD 154
+ D + E LP S + AII + G T +G VC VHG YFY++
Sbjct: 135 FCAHDVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATR 194
Query: 155 DISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM-V 213
D +++ +E++ S V ++ V K S+M + S P+L + + +
Sbjct: 195 DA--VSKVMSNLEKESSSCSYV------VKQVNKMSLMGFNTNTS-PYLMMSFSNHFVGK 245
Query: 214 ASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL 273
+ R + D LD F +E V RF++D W + R+T+K
Sbjct: 246 EAARNLKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD- 294
Query: 274 SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQV 329
S C+LE DC D+ E+ ++ ++FDIEC FP+ T+ D +IQ+
Sbjct: 295 SNCELELDCCVGDLQVLRDRVEWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQI 351
Query: 330 ANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYN 389
+ V + +++ TL SCA I GV + +E +++ ++ F+R P+ + GYN
Sbjct: 352 S-CVCFDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYN 410
Query: 390 ICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
I FD+PY+I + + ++Q G +R + C K
Sbjct: 411 INAFDIPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 445
>gi|392571499|gb|EIW64671.1| hypothetical protein TRAVEDRAFT_42080 [Trametes versicolor FP-101664
SS1]
Length = 1667
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 196/633 (30%), Positives = 302/633 (47%), Gaps = 52/633 (8%)
Query: 406 HSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRG 465
++ S + E R+ Y + + +LD + E ARV GV +LSRG
Sbjct: 1002 QTVTSWFNSPVPEHAHRVLRYFAQRTIMVLEILDVAEVVTKNAEFARVFGVDFFSVLSRG 1061
Query: 466 QSIKVLSQLLRKAKQKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASL 523
KV S + R AK +N V+ P+ + G + ++E + FY P+ LDF SL
Sbjct: 1062 SQFKVESFMFRIAKPENFVLISPSKQDVGKQNAAECIPLIMEPLSAFYNSPLVVLDFQSL 1121
Query: 524 YPSIMMAYNLCYSTLVTP----------------EDARKLNLPPECVNKTPSGETFVKSN 567
YPSIM+AYN CYST + + A L + +N P+G +VK
Sbjct: 1122 YPSIMIAYNYCYSTCLGRVTDFKGQFKFGVTDLRQPAGMLATLHDYINVAPNGMMYVKQT 1181
Query: 568 LQKGILPEILEELLAARKRAKADLKEAKDPLEKA---VLDGRQLALKISANSVYGFTGAT 624
+++G+L +L ELL R K +K AKD +KA +LD RQL LK AN YG+T A+
Sbjct: 1182 VRRGLLGRMLTELLDTRVMVKQAMKGAKD--DKALHRILDARQLGLKFIANVTYGYTSAS 1239
Query: 625 V-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVP 683
G++P +EI+ S+ GR+ +E +++ + A+V+YGDTDS+ +
Sbjct: 1240 YSGRMPAVEIADSIVQSGRETLEKAIRVINST------KKWGAKVVYGDTDSLFIYLPGK 1293
Query: 684 TVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKFDKMDT 742
T + A ++G++ AD I+ PIKL+FEKVY P +L++KKRY G + NP +K D
Sbjct: 1294 TKDQAFRIGQDMADSITQMNPAPIKLKFEKVYLPCVLMAKKRYVGFKFENPDDKEPVFDA 1353
Query: 743 KGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKG 802
KGIETVRRD + + CL + +D+ +Y T S +L N++ + + K
Sbjct: 1354 KGIETVRRDGIPAQQKMTETCLKILFRTQDLSQVKEYCCRTWSRILENKVSIQDFIFAKE 1413
Query: 803 LT-KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYV 861
+ T D V +A R D P G+R+PYVI + G++ +R+ P +
Sbjct: 1414 VKMGTYSDRVPPPPGVTVAARRMLEDPNDEPQYGERIPYVITRGEPGSRIVDRAAAPHDL 1473
Query: 862 LENNIP-IDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTP--------- 911
+++ +D +YY+ + PL RIF L A D +S+ + P
Sbjct: 1474 FQDSYKRLDANYYISRVLIPPLERIFN--LVGADVRSWFDDMPKSLRVDQPDVTLSPRKN 1531
Query: 912 ------SNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFG 965
+N+ + C+ CKAL + LC C+ A + +S+V E
Sbjct: 1532 KKSDMVANAFKIDDHFTSSHCLICKALTPD-VLCEVCRSDYATTISELLSRVHSTERKLN 1590
Query: 966 RLWTQCQECQGSL-HQDVLCTSRDCPIFYRRKK 997
+ C C G+ + V C S DCP Y RKK
Sbjct: 1591 NVHLVCGSCCGTAPAEPVQCESLDCPWLYERKK 1623
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 98 IDYVIGDSNRELLPLSSGS---AAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPD 154
IDY + PL S +IRI+G + G C +H PYF++ + M PD
Sbjct: 17 IDYTVAPPG----PLDHSSLHRVPVIRIYGDSSLGLKTCVHIHQVYPYFFVEYLEKMHPD 72
Query: 155 DISHFHQILEGRMREA-----NRN--SKVPQFVRHIEMVQKRSIMYYQ-QQKSQPFLKIV 206
++ + L+ + A RN S +FVR I +V + + +Y PFLK+
Sbjct: 73 IVNRYIAKLQHSLNHAIAISLKRNPLSAKSKFVRAIVLV--KGVHFYGFHANYAPFLKVH 130
Query: 207 VALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV 261
+A P V I+ G + F YES++ + L+F+ D + G WI++
Sbjct: 131 IADPAFVNRAVTIMQSGTIMK----TRFRVYESHIQYLLQFLCDFGLYGCGWIDL 181
>gi|443719046|gb|ELU09367.1| hypothetical protein CAPTEDRAFT_153186 [Capitella teleta]
Length = 768
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 195/597 (32%), Positives = 293/597 (49%), Gaps = 41/597 (6%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGSE 494
++ L I E ARV G+ +LSRG +V S +LR AK N V P+ +Q ++
Sbjct: 167 IMKHLDLISTTSEFARVFGIEFYHVLSRGSQYRVESMMLRIAKPLNYIPVSPSPQQRAAQ 226
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDA---------- 544
+ +E + FY P+ LDF SLYPSIM+AYN C+++ + D
Sbjct: 227 RAPECIPLTMEPVSRFYTHPVVVLDFQSLYPSIMIAYNYCFTSCLGRLDCLAKAGYGPFN 286
Query: 545 ---RKLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEA 594
LN+PP VN P+G F +++KG+LP ++EE+L R K +K+
Sbjct: 287 FGCSSLNIPPSVLKSLEKDVNICPNGVVFANQSVRKGVLPLMVEEILNTRLMVKKSMKDC 346
Query: 595 KD--PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKL 651
KD L+K +L RQL LK+ AN +G+T A+ G++P +E+ S+ R+ +E L
Sbjct: 347 KDDKTLQK-MLHARQLGLKLIANVTFGYTAASFSGRMPLVEVGDSIVRKARETLERAIAL 405
Query: 652 VEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEF 711
VED A+V+YGDTDS+ +Q T E A K+G+E AD ++ KPIKL+F
Sbjct: 406 VEDT------PRWQAKVVYGDTDSMFLQLEGRTKEEAFKIGQEIADAVTQANPKPIKLKF 459
Query: 712 EKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
EKVY P +L +KKRY G +Y T +K KGIETVRRDNC +V ++ + +
Sbjct: 460 EKVYLPCVLQAKKRYVGFMYETVDQKEPVFHAKGIETVRRDNCSVVSKMLERSIKLLFST 519
Query: 771 RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAAT 830
RDI YV+ ++ R ++ V K V +E+A + +D
Sbjct: 520 RDISQVKSYVQKQCVKMMEGRFNIQDCVFAKEFRGMSGYRGVSVPSLEIARKRLLKDRCA 579
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P V +RVPYVI+ G + +P +LE+ + I+T YY+ Q+ PL R+F I
Sbjct: 580 EPLVSERVPYVIVYGTPGLPLIQLVREPHELLEDPTLRINTLYYITKQVLPPLDRLFALI 639
Query: 890 ---LKNASKELLSGDHTRSISISTPSN--SGIMKFAKRQLSCIGCKALISNGTLCSHCKG 944
+K EL I ST N I ++ L C C ++GT C C
Sbjct: 640 GVDVKMWYYELPRFLRAPIIPDSTAVNKKETISQYFS-SLYCPICDGTTNHGT-CDKCST 697
Query: 945 REAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKD 1001
++++ E L C C G+ D+ C S DCP+ ++ KA+++
Sbjct: 698 DPQRATVILGTRIRIYESKLRSLSQICTNCMGTNDVDLPCRSIDCPVLFQVVKAKQE 754
>gi|218200227|gb|EEC82654.1| hypothetical protein OsI_27267 [Oryza sativa Indica Group]
gi|222637649|gb|EEE67781.1| hypothetical protein OsJ_25510 [Oryza sativa Japonica Group]
Length = 1797
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 196/643 (30%), Positives = 315/643 (48%), Gaps = 68/643 (10%)
Query: 415 GNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQL 474
G+ R R Y K + L +L++L + E+ARV G+ +LSRG +V S L
Sbjct: 1147 GSGRGRYRCIEYVNKRSSLNLEILNQLDLVNRTSELARVFGIDFFSVLSRGSQFRVESML 1206
Query: 475 LRKAKQKNL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYN 532
LR +N + P +Q S+ V+E + FY P+ LDF SLYPS+++AYN
Sbjct: 1207 LRLVHTQNYLAISPGNQQVASQPAMECLPLVMEPESAFYSDPVVVLDFQSLYPSMIIAYN 1266
Query: 533 LCYSTL---VTPEDARKLNLPPECVNK------------TPSGETFVKSNLQKGILPEIL 577
LCYST V P + L + + TP+G +V+ ++KG+LP +L
Sbjct: 1267 LCYSTCLGKVFPSKSSVLGVSSYSADPQKIADLKNQLLLTPNGVLYVQPEVRKGVLPRLL 1326
Query: 578 EELLAAR---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEI 633
EE+L+ R K+A L ++ L++ + + RQLALK+ AN YG+T A G++PC EI
Sbjct: 1327 EEILSTRIMVKKAMKKLSASQKVLQR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAEI 1385
Query: 634 SSSVTSYGRQMIEHTKKLVEDKFTTVGGYEH---NAEVIYGDTDSVMVQFGVPTVEAAMK 690
+ S+ GR+ +E V +H A V+YGDTDS+ V + E A +
Sbjct: 1386 ADSIVQCGRRTLETAISFVN---------QHPLWKARVVYGDTDSMFVLLKGRSREEAFR 1436
Query: 691 LGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVR 749
+G+E A I+ P+ L+FEKVY+P L++KKRY G + +PE+ + + D KGIETVR
Sbjct: 1437 IGKEIASSITAMNPDPVTLKFEKVYHPCFLLTKKRYVGYSYESPEQKEPIFDAKGIETVR 1496
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD C V ++ + + + ++D+ Y++ + +L ++ + V K + + G
Sbjct: 1497 RDTCPAVAKILEQSIRIMFEEQDLAKVRSYLERQWTRILSGKISIQDFVFAKEV-RLG-T 1554
Query: 810 YEVKAAHVE----LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 865
Y +A+ + +A + D P G+RVPYV+I GA+ + DP +LE
Sbjct: 1555 YSARASSLPPAAIVATKAILSDPRAEPRYGERVPYVVIHGEPGARLVDMVIDPYGLLEVG 1614
Query: 866 IP--IDTHYYLENQISKPLLRIF---------------EPILKNASKELLSGDHTRSISI 908
P ++ YY+ QI L R+F PI + +K + H S S
Sbjct: 1615 SPYRLNALYYITKQIIPALQRVFGLVGADLNKWFNEMPRPIRETLAKRQSASGHG-SFSR 1673
Query: 909 STPSNSGIMKFAK-----RQLSCIGCKALI-SNGTLCSHCKGREAELYCKTVSQVQELEV 962
+ G+ K ++ CI C +I + T C++C EA + + +LE
Sbjct: 1674 LGLNKKGVGKGSRIDTYYMSSHCIICGEIIQGSDTFCNNCLRNEAVVGTIVAGRTSKLER 1733
Query: 963 LFGRLWTQCQECQGS---LHQDVLCTSRDCPIFYRRKKAQKDM 1002
L C C G+ + + C S CP+F+ R+K Q+++
Sbjct: 1734 EIQHLAAICGHCGGADWIVESGIKCISLACPVFFERRKIQREL 1776
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 28/155 (18%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGM------GPDDISHFHQILEGRMREANR 172
+IRI+G T G C +H P+ Y+ C + + G IS LE ++ R
Sbjct: 53 VIRIYGSTPAGQKTCLHIHRVLPFLYVPCKEDLLHNVEKGNSFISGLLSDLEKALQ--IR 110
Query: 173 NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK 232
+S + V +V+ + + Y P V+ L G L+ +
Sbjct: 111 SSSKKKHVHGCTLVRAKKLYY----------------PHEVSRAAAHLLDGAVLN----R 150
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F YES++ + L F+ID N+ G ++ V K+R
Sbjct: 151 VFQPYESHIPYLLHFLIDYNLYGMGYVHVTDFKFR 185
>gi|328718109|ref|XP_001949189.2| PREDICTED: DNA polymerase zeta catalytic subunit-like [Acyrthosiphon
pisum]
Length = 1485
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 198/600 (33%), Positives = 300/600 (50%), Gaps = 41/600 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGS 493
+L +L I E+A++ G+ +LSRG +V S +LR AK KN V P++KQ
Sbjct: 883 NILQQLDIIGRTSELAKLFGIQFYEVLSRGSQFRVESMMLRLAKNKNYVAVSPSIKQRAE 942
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPED---------- 543
++E + FY P+ LDF SLYPSI++AYN C+ST + D
Sbjct: 943 MNAAQSVPLIMEPESKFYTDPVIVLDFQSLYPSIIIAYNYCFSTCLGNIDLLGKTEVFKF 1002
Query: 544 -ARKLNLPPECVNK-------TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
KLN+P + + K +PSG FVK N+ KGILP +L+E+L R K +KE K
Sbjct: 1003 GCTKLNVPFQTLLKLTDDMTISPSGVAFVKKNICKGILPSMLQEILDTRIMVKNLMKEQK 1062
Query: 596 DPLEKA-VLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
+ +L+ +QL LK+ AN YG+T A G++PCIE+ SV S GR+ +E L++
Sbjct: 1063 NNKHLCKILNAQQLGLKLIANVTYGYTSANFSGRMPCIEVGDSVVSKGRETLERAITLIQ 1122
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
+ NA+VIYGDTDS+ V + E A K+G E AD ++ PIKL+FEK
Sbjct: 1123 ------STKKWNAKVIYGDTDSIFVLLQGRSKEEAFKIGNEMADIVTKDNPIPIKLKFEK 1176
Query: 714 VYYPYLLISKKRYAGLYWTNPE-KFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G + N E K K + KGIETVRRD C V ++ + L + +D
Sbjct: 1177 VYLPCILQTKKRYCGYMYENIEQKKPKYEAKGIETVRRDGCPAVSKILEKSLCILFETKD 1236
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I Y+ + +++ + K + ++Y A +ELA++ D
Sbjct: 1237 IAAVKCYIDKQFKKIFKGNVNIQDFLFAKEY-RGRNNYRPGACVPALELAKQWTAVDRRA 1295
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPI-YVLENNIPIDTHYYLENQISKPLLRIFEPI 889
P V +RVPY+II KG + P ++ + + I+ YY+ I PL R F +
Sbjct: 1296 EPRVKERVPYLIIAGPKGLPLIKLVRSPKHFISDKSARINAEYYITRAIIPPLQRCFSLL 1355
Query: 890 LKNASK---EL--LSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKG 944
+ +K EL H I+ +T + ++ Q +CI C L +G C C+
Sbjct: 1356 NVDINKWYSELPRKYNFHFPDITTTTNRKQTLSQYFFSQ-NCILCSKLSQHG-FCEQCQQ 1413
Query: 945 REAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAE 1004
L + + + L T C+ C G + ++ C S +C I+Y ++A KDM +
Sbjct: 1414 NPQYLIVQLNHLLSKWTKKQDDLETICRSCCGR-NFELKCNSLNCQIYYGAQQAAKDMQQ 1472
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDD---ISHFHQILEGRMREA--NRN 173
++R+FG T G C VHG PY +I + + + +F L+ + A + N
Sbjct: 43 VLRVFGCTPNGEKCCLHVHGVFPYIFIPLEESYETKNQEILYNFGNSLDKALSLAIGSTN 102
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
SK + + +I V +S Y + ++ FLKI+ P +L G + +
Sbjct: 103 SK-SKHIHNIITVCGKSFYGYHTENTK-FLKILFYNPYSAKIAVDLLQNGAVCNTI---- 156
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT----LSYCQLEFD 281
F +E+++ + L+FMID N+ G N+I++ KYR + + +S C E D
Sbjct: 157 FQPHEAHIPYHLQFMIDYNLHGMNYIKLSAVKYRNSVEQGLSKMSRCTNEMD 208
>gi|167518151|ref|XP_001743416.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778515|gb|EDQ92130.1| predicted protein [Monosiga brevicollis MX1]
Length = 887
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 208/679 (30%), Positives = 324/679 (47%), Gaps = 60/679 (8%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDL----QNGNAETRRR 422
R +L WR E+ NIC Y + V H L Q+ + R R
Sbjct: 203 RILLNLWRIMRHELALTSYSFENIC-----YHVLHRRVAHVRQQQLRDWYQSASTRHRWR 257
Query: 423 LAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN 482
Y A +LL +L I E AR+ G+ + +L+RG +V S ++R A Q++
Sbjct: 258 TLHYLGVRAEGSLQLLYELNIIQRTSEFARLFGILFNEVLTRGSQFRVESIMVRLAHQRD 317
Query: 483 LVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV- 539
++ P+ Q ++ A +LE + FYE P+ LDF SLYPS+M+AYN+CYST +
Sbjct: 318 QIMLSPSKVQVREQRAPEVVALILEPESVFYESPVVVLDFQSLYPSMMIAYNMCYSTCLG 377
Query: 540 -----TPEDARK-----LNLPP---------ECVNKTPSGETFVKSNLQKGILPEILEEL 580
+P + K L LPP + V+ P+G FVKS ++ G+LP +L+E+
Sbjct: 378 KVSSESPGEPFKFGVSDLQLPPGLLSRLVAQDLVHICPNGTMFVKSEVRHGVLPVMLDEI 437
Query: 581 LAARKRAKADLK-EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVT 638
L R K + E +++ RQL LK+ AN YG+T AT G++PC++I+ ++
Sbjct: 438 LRTRVMVKKAMGGEPAGGAAHRLMNARQLGLKLIANVTYGYTAATFSGRMPCVDIADAIV 497
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
R+ + K+VE + +A+V+YGDTDS+ V T E A ++GRE A
Sbjct: 498 QQARETLTKAMKVVETH------PDWHAKVVYGDTDSMFVLLPGATKETAFRIGREMAAT 551
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
IS + P++L+FEKVY P +L +KKRY G +Y T + D KGIETVRRD C V
Sbjct: 552 ISAQYPAPVRLKFEKVYLPCILQTKKRYVGYMYETETQTEPVFDAKGIETVRRDWCPAVT 611
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA--A 815
+ L + RD+ Y+ LL +L+ + K + + Y KA A
Sbjct: 612 KTLERSLRILFEKRDLSLLRAYLTREWIKLLKGEFNLTDYIFAKAY-RGRESYSSKACVA 670
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL-ENNIPIDTHYYL 874
+E+A + + D P VG+RVPYVI+ A P +L ++++ ++ HYY+
Sbjct: 671 ALEIANKRARVDPRAEPRVGERVPYVIVCGPPKATLITLVRQPDELLSDSSLRLNAHYYI 730
Query: 875 ENQISKPLLRIFE-------PILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCI 927
QI PL R F P + +G ++ + + +F CI
Sbjct: 731 RKQIIPPLERCFNLLGLSVIPWYTTLPRVERAGGMVSDMASHVHNRHTLSQFYA-SAHCI 789
Query: 928 GCKALISNGTLCSHCK---GREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV-L 983
C AL + G LCS C R + V + Q+ + R+ C+ C + + D
Sbjct: 790 VCDAL-TRGRLCSDCHRDPQRSVTILMARVKKAQDRLSVLDRI---CRRCMHAWNADPDA 845
Query: 984 CTSRDCPIFYRRKKAQKDM 1002
C S CP+ + R++ Q+ +
Sbjct: 846 CCSLACPVMFERRRQQQRL 864
>gi|322511170|gb|ADX06483.1| putative B family DNA polymerase [Organic Lake phycodnavirus 2]
Length = 1171
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/565 (31%), Positives = 297/565 (52%), Gaps = 71/565 (12%)
Query: 399 IEKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPI 458
+ K+DV I ++ E R +A YC++D L ++ K+ + + EM+++ VPI
Sbjct: 579 LSKDDVSPKEIFEMTRKGKEERGLIAKYCIQDCNLVHQIFQKIDVMTTFTEMSKLCSVPI 638
Query: 459 SFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFY-EKPIAT 517
+FL+ RGQ IK+ S + +K ++K+ ++P + + G+ + YEGA VLE + G Y + P+A
Sbjct: 639 TFLVLRGQGIKLTSYIAKKCREKDTLMPLISK-GNARDAYEGAIVLEPKCGLYLDVPVAC 697
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDAR-----KLNLP-PECVNKTPSGE-TFVKSNL-- 568
+D++SLYPS +++ N+ + + V ++ KLN EC+ T + F+ NL
Sbjct: 698 VDYSSLYPSSIISENISHDSKVWTKEFNLDHTIKLNSSGKECIYGTKDEQGNFIYDNLPD 757
Query: 569 ----------------------------------------QKGILPEILEELLAARKRAK 588
+K I+P IL+ELLAARK K
Sbjct: 758 YEYVDITYDTFAYVRKTQSAAATKVLTGYKICRYAQFPNDEKAIMPSILDELLAARKSTK 817
Query: 589 ADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHT 648
+K DP ++ +LD RQL++KI+ANS+YG TGA +++++S T+ GR+++ +
Sbjct: 818 KQMKNEHDPFKQNILDKRQLSIKITANSLYGQTGAKTSTFYEMDVAASTTAIGRKLLIYA 877
Query: 649 KKLVEDKF------TTVGGYEHNAEVIYGDTDSVMVQF------GVP-----TVEAAMKL 691
K+++E + T G + AE IYGDTDSV F GV +E ++L
Sbjct: 878 KEVIEGVYGNSEVDTKYGKMKTRAEYIYGDTDSVFFTFHFEDLNGVKIKDKQALEMTIEL 937
Query: 692 GREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRR 750
+EA + P LE+EK + P+ L+SKKRY G LY +PEK K + GI RR
Sbjct: 938 AKEAGHLCTSFLKNPHDLEYEKTFMPFCLLSKKRYVGMLYEEDPEK-GKRKSMGIVLKRR 996
Query: 751 DNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDY 810
DN +VK++ + ++ D++I ++ ++ + + ++ + + LVITK L +
Sbjct: 997 DNAPIVKDVYGGIIDILMKDKNIDKSIDFLDTMLQSIIDKNVIMDKLVITKSLRSFYKN- 1055
Query: 811 EVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDT 870
+ AH LA R+ RD P GDR+P+V I+ ER E P ++ + + ID
Sbjct: 1056 PNQIAHCVLANRIGIRDPGNKPAPGDRIPFVYIQTTGKKLQGERIETPQFIQDEQLKIDY 1115
Query: 871 HYYLENQISKPLLRIFEPILKNASK 895
+Y+ NQI KP+++I+ +L + +K
Sbjct: 1116 GFYISNQIMKPIIQIYSLVLYDMTK 1140
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 318 FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMS-FETERDVLLAWRDF 376
FPE + D V + + G+++P++ + + L + IV ++ ++ E+DVL AW
Sbjct: 347 FPELSGDQVTFIGSTFVNYGQEKPYLNHCICLNDTSTIVDHQIIECYDHEKDVLCAWSKL 406
Query: 377 IREVDPDVMIGYNICKFDLPYLIEK 401
I++ DPD++IGYNI FD P++ E+
Sbjct: 407 IQKEDPDIIIGYNIFGFDYPFMFER 431
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 12/210 (5%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQF 179
I+++G+ + V+ F P+ YI P F Q + + S
Sbjct: 21 IQMYGLDEHRKTYSITVNHFNPFVYILVPNIWSKSKTDDFIQHFKDHDDKTIARSSSENI 80
Query: 180 VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL-DRGIQL--DGLGMKSFMT 236
V + E+V+K+++ + K F+ I + + + + D+ Q +G ++F T
Sbjct: 81 VSY-ELVKKKTLYGFDANKYYNFVYISCKNMSFIYKLKSLYYDKETQQINEGYLYQNFRT 139
Query: 237 --YESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEG 294
YE + LRF I WIE+ Y+K ++ ++ C Y DIIS +
Sbjct: 140 KIYECMIPPLLRFFHIQKISPSGWIEI--NTYKKYTTKRTHMDMDIGCHYKDIISLDKDD 197
Query: 295 EFSKMAPFRILSFDIECAGRKGHFPEPTHD 324
+ P++I SFDIE + G FPE + D
Sbjct: 198 ----IVPYKICSFDIEASSSHGDFPEASKD 223
>gi|71000489|ref|XP_754928.1| DNA polymerase zeta catalytic subunit [Aspergillus fumigatus Af293]
gi|66852565|gb|EAL92890.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus
fumigatus Af293]
Length = 1656
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 207/672 (30%), Positives = 322/672 (47%), Gaps = 51/672 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y + +L+ + H+S + + Q+G
Sbjct: 968 TGRHMINIWRAMRSELN---LLQYTMENVVF-HLLHRRIPHYSYRDLTAWYQSGKPRDVL 1023
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
++ Y + + +L+ I E AR+ G+ + SRG KV S + R AK +
Sbjct: 1024 KVVQYYVSRIQMNLEILESNELIPRTSEQARLLGIDFFSVFSRGSQFKVESLMFRIAKPE 1083
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ KQ G + V+E ++ FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 1084 NYLLVSPSRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFL 1143
Query: 540 T----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
R L L + VN P+G +VK +++ +L +L E+L
Sbjct: 1144 GRVHLWRGRNKMGFMDYKRQPRVLELLKDKVNIAPNGMMYVKPEVRQSLLARMLAEILET 1203
Query: 584 RKRAKADLKEAKDPLEKAV---LDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTS 639
R KA +K KD +KA+ L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1204 RVMVKAGMKMDKD--DKALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQ 1261
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
GR+ +E L+ +V + AEV+YGDTDS+ V T + A +G E A +
Sbjct: 1262 SGRETLEKAIALIH----SVERW--GAEVVYGDTDSLFVYLKGRTRDEAFGIGEEIAKAV 1315
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+ PIKL+FEKVY+P +L++KKRY G Y +K + D KGIETVRRD +
Sbjct: 1316 TDINPHPIKLKFEKVYHPCVLLAKKRYVGFKYEHRNQKEPEFDAKGIETVRRDGTPAEQK 1375
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHV 817
+ + L + D+ +Y + + ++ R+ + K + T + +
Sbjct: 1376 IEEKALKLLFRTADLTQVKRYFQKQCAKIMQGRVSIQDFCFAKEVRLGTYSERGLLPPGA 1435
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLEN 876
++ R D + P G+RVPYV++ A G++ +R P +L N + +D YY+
Sbjct: 1436 MISTRKMVEDPRSEPQYGERVPYVVVTGAPGSRLVDRCVAPETLLHNAELELDAEYYINK 1495
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAK--------RQLSCIG 928
I PL RIF + N + + I + S K AK + SCI
Sbjct: 1496 NIIPPLERIFNLVGANVRQWYEEMPKIQRIRRIEGAASAAGKDAKGKTLESYMKSSSCIV 1555
Query: 929 CKALISNGTL--CSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCT 985
CK+ + + + CS C + VS+ Q+ E L CQ C G DV+C
Sbjct: 1556 CKSKLDHIGIPVCSDCLQQPHISLLSLVSRQQQAEKRVSDLHRICQSCMGVPSGDDVICD 1615
Query: 986 SRDCPIFYRRKK 997
S+DCP+FY R +
Sbjct: 1616 SKDCPVFYSRTR 1627
>gi|356640379|ref|YP_004933821.1| protein UL54 [Cynomolgus macaque cytomegalovirus strain Ottawa]
gi|350606734|gb|AEQ32165.1| protein UL54 [Cynomolgus macaque cytomegalovirus strain Ottawa]
Length = 1035
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 281/543 (51%), Gaps = 63/543 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KED+ + I E R ++ YC++DA L + L + + F + +AR+ +P+
Sbjct: 468 QKEDMSYKDIPVKFISGCEGRAQVGKYCVQDAVLVKDLFNTINFHYEAGAIARLARIPMR 527
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG----TYEGATVLEARAGFYEKPI 515
++ GQ I++ + LL + ++ V+PN K A + +Y+GATV E G+Y P+
Sbjct: 528 RVIFDGQQIRIYTSLLDECACRDFVMPNHKGADNSSEPTDVSYQGATVFEPEVGYYSDPV 587
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET-----FVKSNLQK 570
DFASLYPSI+MA+NLCYST V P PPE T E+ FVK+ ++
Sbjct: 588 VVFDFASLYPSIIMAHNLCYSTFVAPGGES----PPESDVLTVELESGLSYRFVKNTVRN 643
Query: 571 GILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPC 630
+L E+L + ++ R+ + +K DP+++ +LD QLALK++ N+ YGFTG G +PC
Sbjct: 644 SVLSELLTKWVSQRRAVRETMKSCHDPVKRMLLDKEQLALKVTCNAFYGFTGVVNGMMPC 703
Query: 631 IEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHN-------------AEVIYGDTDSVM 677
+ I++S+T GR M+ T + VE+ F + HN +VIYGDTDSV
Sbjct: 704 LPIAASITRIGRDMLMRTSQFVEENFAE-PCFLHNFFNREDYSGDPVAVKVIYGDTDSVF 762
Query: 678 VQFGVPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEK 736
V + T A ++ G A YI+ F+ PIKLEFEKV+ ++I KKRY G E
Sbjct: 763 VCYRGVTAAALIERGPSLAHYITQCLFVDPIKLEFEKVFGSLMMICKKRYIGKIVGETE- 821
Query: 737 FDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP-GAVQYVKSTISDLLM------ 789
+ KG++ VR+ +C VKN+ + + + D ++ AVQ + T+ +L +
Sbjct: 822 ---LSMKGVDLVRKTSCEFVKNVTRDIIQLLFDDPEVSRAAVQLSRLTLDELKLQGVPPG 878
Query: 790 -----------------NRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATA 831
+R + LV++ L+K Y + H+ + +R+ R +
Sbjct: 879 FGRVIQRLSQARDELYTSRARVEELVLSSVLSKDVSLYKQSNLPHIAVIKRLAAR-SEEL 937
Query: 832 PNVGDRVPYVIIKAA----KGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
P VGDRV YV+ A G + YE +EDP YV E+ +PI Y + Q+ K + +
Sbjct: 938 PVVGDRVFYVLTAPADGRSSGVRNYEIAEDPTYVREHGVPIHADKYFD-QVIKSVTNVLS 996
Query: 888 PIL 890
P+
Sbjct: 997 PVF 999
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 129/299 (43%), Gaps = 38/299 (12%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI--SHFHQILEGRMREANRN 173
S ++R FG T +G+S+C V G YFY G D+ S + E RM
Sbjct: 121 SGNVLRFFGATEQGYSICVNVFGQRSYFYCEYADGDLLRDLLASVSDLVSEPRM------ 174
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC-RGILDRGIQLDGLGMK 232
+ I VQK SI Y ++ ++ +M +L+ GI +
Sbjct: 175 ----AYALTITPVQKMSIYGYGTSPIPNLFRVSLSNWSMAKKIGEYLLENGIPV------ 224
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
YE V R +ID + W V +Y S C E DC +DI++
Sbjct: 225 ----YEIRVDPLTRLVIDKKMTTFGW--CCVHRYEWRTHKSSTCDFEIDCDVADIMAVSD 278
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQG-----EKQPFIR- 344
+ + +R LSFDIEC G FP E T D +IQ++ + G E F
Sbjct: 279 D---TSWPVYRCLSFDIECMSASGGFPAAEQTDDIIIQISCVCYNTGGTGCEENTVFGTS 335
Query: 345 --NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++ T+ SCAP+ GVDV F +E ++LL + F + P + GYNI FD Y++ +
Sbjct: 336 GLHLFTIGSCAPLAGVDVYEFPSEYEMLLGFLIFFQRYSPCFVTGYNINSFDFKYILTR 394
>gi|355716165|gb|AES05523.1| REV3-like, catalytic subunit of DNA polymerase zeta [Mustela putorius
furo]
Length = 1155
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 195/571 (34%), Positives = 290/571 (50%), Gaps = 38/571 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N + P+V+Q
Sbjct: 592 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPLTPSVQQRSQ 651
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 652 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 711
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 712 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 771
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 772 QDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 831
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D + A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 832 DT------KKWGARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 885
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 886 VYLPCVLQTKKRYVGYMYETLEQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 945
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
+ QYV+ LL + + K + Y+ A +EL +M D +
Sbjct: 946 LSLIKQYVQRQCMKLLEGTASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 1004
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII A G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 1005 EPRVGERVPYVIICGAPGVPLIQLVRRPVEVLQDPALRLNATYYITKQILPPLARIFSLI 1064
Query: 890 ---LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGR 945
+ + EL S S S P G + L C C L +G +C+ C+ +
Sbjct: 1065 GIDVFSWYHELPRIQKATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICTKCRSQ 1123
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQG 976
+ +++ELE +L C+ C G
Sbjct: 1124 PQHVAVILNQEIRELERKQEQLVKICKNCTG 1154
>gi|359946444|ref|YP_004936030.1| DNA polymerase catalytic subunit [Cercopithecine herpesvirus 5]
gi|359831726|gb|AEV80365.1| DNA polymerase catalytic subunit [Cercopithecine herpesvirus 5]
Length = 1037
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 276/543 (50%), Gaps = 63/543 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I +E R + YC++DA L + L + + F + +AR+ +P+
Sbjct: 470 QKDDLSYKEIPVRFIAGSEGRADVGKYCMQDALLVRDLFNIINFHYEAGAIARLAKIPMR 529
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSE----QGTYEGATVLEARAGFYEKPI 515
++ GQ I++ + LL + ++ ++PN K A + + +Y+GATV E + G+Y P+
Sbjct: 530 RVVFDGQQIRIYTSLLDECACRDFILPNHKGADASAENPEVSYQGATVFEPQIGYYSDPV 589
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET-----FVKSNLQK 570
DFASLYPSI+MA+NLCYSTL+ P+ PP+ T E F K+ +
Sbjct: 590 VVFDFASLYPSIIMAHNLCYSTLIMPDG----ECPPDTQVFTVELENGVTHRFAKNTARL 645
Query: 571 GILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPC 630
+L E+L + ++ R+ + +K +DP+++ +LD QLALK++ N+ YGFTG G +PC
Sbjct: 646 SVLSELLTKWVSQRRAVRETMKSCQDPVKRMLLDKEQLALKVTCNAFYGFTGVVNGMMPC 705
Query: 631 IEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHN-------------AEVIYGDTDSVM 677
+ I++S+T GR M+ T VE+ FT + HN +VIYGDTDSV
Sbjct: 706 LPIAASITRIGRDMLTRTSTFVEENFTE-PCFLHNFFNREDYSGDPVEVKVIYGDTDSVF 764
Query: 678 VQFGVPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEK 736
V + T A + G A Y++ F+ PIKLEFEKV+ ++I KKRY G E
Sbjct: 765 VCYRGITATALINRGSSLAAYVTQCLFVDPIKLEFEKVFVSLMMICKKRYIGKVSGESE- 823
Query: 737 FDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP-GAVQYVKSTISDLLMNRMDLS 795
+ KG++ VR+ +C VKN+ + + + D ++ AVQ + T +L + L
Sbjct: 824 ---LSMKGVDLVRKTSCEFVKNVTRDIIQLLFDDPEVSRAAVQLSRLTFDELKAQGVPLG 880
Query: 796 LLVITKGLTKTGDDYEVKAA------------------------HVELAERMRKRDAATA 831
+ + L K DD A H+ + +R+ R +
Sbjct: 881 FWRVIQRLCKARDDLYTSRARVEELVLSSVLSKDVSLYKQANLPHIAVIKRLAAR-SEEL 939
Query: 832 PNVGDRVPYVIIKAAKGAKA----YERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
P VGDRV YV+ G A YE +EDP YV E+ +PI Y + Q+ K + +
Sbjct: 940 PTVGDRVFYVLTYPGDGRTAGVCNYEIAEDPAYVREHGVPIHAEKYFD-QVIKAVTNVLS 998
Query: 888 PIL 890
P+
Sbjct: 999 PVF 1001
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
S ++R FG T +GHS+C V G YFY G ++L + A+
Sbjct: 121 SGNVLRFFGATEQGHSICVNVFGQRSYFYCEYQDG----------ELLRDLLASASELVA 170
Query: 176 VPQFVRHIEMVQ--KRSIMYYQQQKSQPFLKIVVALPTMVASC-RGILDRGIQLDGLGMK 232
P+ + +VQ K SI Y + ++ ++ TM +L++G+ +
Sbjct: 171 EPRMSYALSIVQATKTSIYGYGTRPVPNLYQVSMSNWTMAKKIGEYLLEQGVPV------ 224
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
YE V R +ID + W V ++R K+ S C E DC +D+++
Sbjct: 225 ----YEIRVDPLTRLVIDKKMTTFGWCCVNRYEWRHKNKS-STCDFEIDCDVADLMAIAD 279
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIRNVM--- 347
+ + +R LSFDIEC G FP E D +IQ++ + G + V
Sbjct: 280 D---TSWPVYRCLSFDIECMSASGGFPVAEQVDDIIIQISCVCYETGGTGREVSTVFGTS 336
Query: 348 -----TLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKE 402
T+ SC + DV F +E ++LL + F + P + GYNI FD Y++ +
Sbjct: 337 GMHLFTIGSCGRVGTADVYEFPSEYEMLLGFLIFFKRYAPCFVTGYNINAFDFKYILTRL 396
Query: 403 D 403
D
Sbjct: 397 D 397
>gi|160420026|dbj|BAF93476.1| DNA polymerase [Human herpesvirus 6]
Length = 1012
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 279/536 (52%), Gaps = 52/536 (9%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
EKE + + IS R + YCL+D+ L RL ++ + + E+AR+ V
Sbjct: 452 EKEQLSYKEISKKFISGPSGRAVVGKYCLQDSVLVVRLFKQINYHYEVAEVARLAHVTAR 511
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT-YEGATVLEARAGFYEKPIATL 518
++ GQ K+ +L +AK++N+++P++ + + QG Y+GATVLE + G+Y P
Sbjct: 512 CVVFEGQQKKIFPCILTEAKRRNMILPSMVSSHNRQGIGYKGATVLEPKTGYYVVPTVVF 571
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEI 576
DF SLYPSIMMA+NLCYSTLV E + + ET FVK +++ +L +
Sbjct: 572 DFQSLYPSIMMAHNLCYSTLVLDERQIAGLSESDILTVKLGDETHRFVKPCVRESVLGSL 631
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
L++ LA R+ KA+++ DP+ K +LD +QLALK + NSVYG TGA G LPC+ I++S
Sbjct: 632 LKDWLAKRREVKAEMQNCSDPMMKLLLDKKQLALKTTCNSVYGVTGAAHGLLPCVAIAAS 691
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGY-------------EHNAEVIYGDTDSVMVQFGVP 683
VT GR+M+ T V K + + + EVIYGDTDS+ +
Sbjct: 692 VTCLGREMLCSTVDYVNSKMQSEQFFCEELGLTASDFTGDLKVEVIYGDTDSIFMSVRNM 751
Query: 684 TVEAAMKLGREAADYISGTFIK-PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDT 742
E+ ++ A +I+ K PIKLEFEK+ P +LI KKRY G + F
Sbjct: 752 ANESLRRIAPMIAKHITDRLFKSPIKLEFEKILCPLILICKKRYIGRQDDSLLIF----- 806
Query: 743 KGIETVRRDNCLLVKNLVTECLHKILVDRDI-PGAVQYVKSTIS---------------- 785
KG++ VR+ +C VK +V + + + D ++ AV++ T +
Sbjct: 807 KGVDLVRKTSCDFVKGVVKDIVDLLFFDEEVQTAAVEFSHMTQTQLREQGVPVGIHKILR 866
Query: 786 -------DLLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPNVGDR 837
+L NR D+ L+++ L+K Y + AH+ + R+ +R PNVGDR
Sbjct: 867 RLCKAREELFQNRADVRHLMLSSVLSKEVAAYKQPNLAHLSVIRRLAQRKEEI-PNVGDR 925
Query: 838 VPYVIIKAAKGAKA---YERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL 890
+ YV+I + G K YE +EDP YVLE+ IPI Y + QI K + PI
Sbjct: 926 IMYVLIAPSTGNKQTHNYELAEDPNYVLEHKIPIHAEKYFD-QIIKAVTNAISPIF 980
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 144/306 (47%), Gaps = 30/306 (9%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
S +IR+FG + +G +C V G E YFY C G + + +L G ++ +
Sbjct: 113 SGTVIRMFGRSEDGEKICVNVFGQEQYFYCECVDGKSLKATIN-NLMLTGEVKMS----- 166
Query: 176 VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
FV IE K S+ Y K V+ S R + + +Q +G F+
Sbjct: 167 -CSFV--IEPADKLSLYGYNANTVVNLFK--VSFGNFYVSQR--IGKILQNEG-----FV 214
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGE 295
YE +V RF +D + W V + K S ++E +C SD++S E
Sbjct: 215 VYEIDVDVLTRFFVDNGFLSFGWYNVKKYIPQDMGKG-SNLEVEINCHVSDLVSL----E 269
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLVTLQGEKQPFIRNVMTLKSCA 353
+ SFDIEC G+ G+FP+ + D VIQ++ +V+ E R++ TL +C
Sbjct: 270 NVNWPLYGCWSFDIECLGQNGNFPDAENLGDIVIQIS-VVSFDTEGDRDERHLFTLGTCE 328
Query: 354 PIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL-IEKEDVHHSII--- 409
I GV + F +E ++LL + F+R P+ + GYNI FDL YL I + ++H I
Sbjct: 329 QIDGVHIYEFASEFELLLGFFIFLRIESPEFITGYNINNFDLKYLCIRMDKIYHYEIGCF 388
Query: 410 SDLQNG 415
S L+NG
Sbjct: 389 SKLKNG 394
>gi|296088359|emb|CBI36804.3| unnamed protein product [Vitis vinifera]
Length = 1732
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 197/634 (31%), Positives = 307/634 (48%), Gaps = 57/634 (8%)
Query: 412 LQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVL 471
+G R R Y ++ A L ++++L I E+ARV G+ +LSRG V
Sbjct: 1092 FSSGPGRARYRSIEYVIQRAKLNFEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYHVE 1151
Query: 472 SQLLRKAKQKNL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMM 529
S LR A +N + P +Q ++ V+E +GFY P+ LDF SLYPS+++
Sbjct: 1152 SMFLRLAHTQNFLAISPGPQQVATQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMII 1211
Query: 530 AYNLCYSTL---VTPEDARKLNLP-----PECVNK-------TPSGETFVKSNLQKGILP 574
AYNLCYST V P A L + P ++ TP+G +V S +KG+LP
Sbjct: 1212 AYNLCYSTCLGKVAPSKADVLGVSIYSPDPHALHDLKDQILLTPNGVMYVPSKARKGVLP 1271
Query: 575 EILEELLAAR---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPC 630
+LEE+L+ R K+A L ++ L++ + + RQLALK+ AN YG+T A G++PC
Sbjct: 1272 RLLEEILSTRIMVKKAMKKLVPSQQVLQR-IFNARQLALKLIANVTYGYTAAGYSGRMPC 1330
Query: 631 IEISSSVTSYGRQMIEHTKKLV--EDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAA 688
E++ S+ GR+ +E+ LV DK+ A+VIYGDTDS+ V TV+ +
Sbjct: 1331 AELADSIVQCGRRTLENAISLVNTHDKW--------KAKVIYGDTDSMFVLLKGRTVKES 1382
Query: 689 MKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIET 747
++G E A ++ P+ L+ EKVY+P L++KKRY G + +P++ + D KGIET
Sbjct: 1383 FQIGHEIASAVTAMNPNPVTLKMEKVYHPCFLLTKKRYVGYSYESPDQIEPTFDAKGIET 1442
Query: 748 VRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL---T 804
VRRD C V + + L +DI Y++ +L R+ L V K + T
Sbjct: 1443 VRRDTCGAVAKTMEQSLRLFFEHQDISKVKVYLQRQWRRILSGRVSLQDFVFAKEVRLGT 1502
Query: 805 KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN 864
+ + A + + MR D P +RVPYV+I GA+ + DP+ +L
Sbjct: 1503 YSSRASSLPPAAIVAIKAMRA-DPRAEPCYAERVPYVVIHGEPGARLVDLVVDPLDLLAI 1561
Query: 865 NIP--IDTHYYLENQISKPLLRIFEPI----------LKNASKELLSGDHTRSISISTPS 912
+ P ++ YY+ QI L R+F + + +E+ + + + P
Sbjct: 1562 DSPYRLNDQYYINKQIIPALQRVFGLVGADLYQWFSEMPRPVREVYAKHKSHA---PNPY 1618
Query: 913 NSGIMKFAKRQLSCIGCKALI-SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQC 971
+ I F CI C L ++ +C C + + + +LE L C
Sbjct: 1619 RTRI-DFYYLSKHCILCGELSPASAHICDKCSKDGTAVAAAVIGRTAKLERDIQHLAAIC 1677
Query: 972 QECQGS---LHQDVLCTSRDCPIFYRRKKAQKDM 1002
+ C G + V CTS C +FY R+K QKD+
Sbjct: 1678 RHCGGGDWIVESGVKCTSLACSVFYERRKVQKDL 1711
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 18/160 (11%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISC----PQGMGPDDISHFHQILEGRMR----EA 170
+IRI+G T G C VH PY Y+ C PQ D ++ H + G + +
Sbjct: 46 VIRIYGSTPVGQKTCLHVHRALPYLYVPCTDLMPQSPQEAD-TYTHAVSLGVEKALKLKG 104
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVAL---PTMVASCRGILDRGIQLD 227
N SK Q V +V+ ++ Y + + F+KI + + P V+ +L G LD
Sbjct: 105 NAGSKR-QHVHGCSLVRAKNFYGYHSSE-ELFVKIYLNISYHPHDVSRAANLLLGGSVLD 162
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
KS +ES++ F L+F+ID N+ G + + K+R
Sbjct: 163 ----KSLQPHESHIPFLLQFLIDYNLYGMGHLHLSKMKFR 198
>gi|453079938|gb|EMF07990.1| hypothetical protein SEPMUDRAFT_167090 [Mycosphaerella populorum
SO2202]
Length = 1725
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 208/714 (29%), Positives = 334/714 (46%), Gaps = 77/714 (10%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLA 424
T R + WR E++ ++ Y + +L+ + H++ + + ++ R LA
Sbjct: 1002 TGRHTINIWRAMRSELN---LLQYTMENVVF-HLLHRRIPHYTYATLTRWYKSDRPRDLA 1057
Query: 425 V---YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
Y + L +LD I E AR+ GV + SRG KV S + R AK +
Sbjct: 1058 KVLDYLVTRTKLDLEILDANELIPRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKPE 1117
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
+ V+ P+ KQ GS+ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1118 SFVLVSPSRKQVGSQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTCL 1177
Query: 540 TP------------EDARK----LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
D ++ L L + +N P+G +VK L+K +L ++L E+L
Sbjct: 1178 GRVTKWRGTNKMGFADFKRHPGLLELTKDKLNVAPNGMMYVKPELRKSLLAKMLGEILET 1237
Query: 584 RKRAKADLK-EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K + D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1238 RVMVKSGMKVDRDDKTLQQLLNNRQLALKLIANVTYGYTSASYSGRMPCSEIADSIVQTG 1297
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E L+ +V + AEV+YGDTDS+ V T + A ++G E A ++
Sbjct: 1298 RETLEKAIALIH----SVERW--GAEVVYGDTDSLFVYLKGRTKDDAFRIGDEIAKAVTD 1351
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLLVKNLV 760
T +PIKL+FEKVY+P +L++KKRY G + +P +K D KGIETVRRD + +
Sbjct: 1352 TNPRPIKLKFEKVYHPCVLLAKKRYVGFKYESPSQKEPDFDAKGIETVRRDGTPAEQKIE 1411
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + D+ Y +S + +L R + K + T D +
Sbjct: 1412 EKALKLLFRTSDLSQVKAYFQSQCTKILTGRFSVQDFCFAKEVKLGTYADRGPPPPGALI 1471
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL-ENNIPIDTHYYLENQI 878
A R +D P G+R+PYV++ A GA+ +ER +P ++ + N +D YY+ +
Sbjct: 1472 ATRRMLKDPRQEPQYGERIPYVVVAGAPGARLWERCVEPEQLIRDENAELDAEYYINKNL 1531
Query: 879 SKPLLRIFEPILKNAS------------KELLSGDHTRSISISTPS--NSGIMKFAKRQL 924
PL RIF + N ++L S H + + P G K +++ +
Sbjct: 1532 IPPLERIFNLVGANVRSWWDELPKVQRIRQLSSVTHQQDHHHNNPPAFTRGNAKISRKTM 1591
Query: 925 -------SCIGCKALISNGT------------------LCSHCK-GREAELYCKTVSQVQ 958
SC+ C +S LC C+ + Q
Sbjct: 1592 ESYMATSSCLVCHTKLSTAAPPKSASSSSSAPQPISLPLCPTCRYSHPTSTLLHLRRKFQ 1651
Query: 959 ELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDR 1011
E L+ C+ C G + +++ C SRDC +FY R KA+ + A+ + R
Sbjct: 1652 SAEFQVSSLYDVCRSCAGLAFDEEIFCESRDCEVFYSRVKAETRLRGARRGVGR 1705
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 43/211 (20%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF---------HQILEGRMRE 169
+IR++G T G C VHG PY Y+ + ++H+ H + R
Sbjct: 67 VIRVWGSTETGQKACVHVHGAFPYLYVPYVDSIEESQVAHYISNLRSSIDHALCLSYRRN 126
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL 229
N + FV HI +V+ Y +LKI + P + +L +G L
Sbjct: 127 PYDNPRNATFVAHISLVKGVPFFGYNVGYKY-YLKIYLLNPLHMTRFADLLHQGAIL--- 182
Query: 230 GMKSFMTYESNVLFALRFMIDCNIVGGNWIEV-------PVGKYRKTAKTL--------- 273
+ F YE+++ + L++M D N+ G +IEV P+ ++ +
Sbjct: 183 -RQHFQPYEAHLQYQLQWMCDFNLYGCAYIEVSKPHFRAPIPRWEEMDDLAHLWHDRSID 241
Query: 274 -------------SYCQLEFDCLYSDIISRH 291
S+CQLE D DI++R+
Sbjct: 242 SQHVLDADQFPRQSHCQLEVDIRVQDILNRN 272
>gi|73695715|gb|AAZ80589.1| rhUL54 [Macacine herpesvirus 3]
Length = 1035
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 281/543 (51%), Gaps = 63/543 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KED+ + I E R ++ YC++DA L + L + + F + +AR+ +P+
Sbjct: 468 QKEDMSYKDIPVKFISGCEGRAQVGKYCVQDAVLVKDLFNTINFHYEAGAIARLARIPMR 527
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG----TYEGATVLEARAGFYEKPI 515
++ GQ I++ + LL + ++ ++PN K A + +Y+GATV E G+Y P+
Sbjct: 528 RVIFDGQQIRIYTSLLDECACRDFIMPNHKGADNSSEPTDVSYQGATVFEPEVGYYSDPV 587
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET-----FVKSNLQK 570
DFASLYPSI+MA+NLCYST V P PPE T E+ FVK+ ++
Sbjct: 588 VVFDFASLYPSIIMAHNLCYSTFVAPGGES----PPESDVLTVELESGLSYRFVKNTVRN 643
Query: 571 GILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPC 630
+L E+L + ++ R+ + ++ DP+++ +LD QLALK++ N+ YGFTG G +PC
Sbjct: 644 SVLSELLTKWVSQRRAVRETMRNCHDPVKRMLLDKEQLALKVTCNAFYGFTGVVNGMMPC 703
Query: 631 IEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHN-------------AEVIYGDTDSVM 677
+ I++S+T GR M+ T + VE+ F + HN +VIYGDTDSV
Sbjct: 704 LPIAASITRIGRDMLMRTSQFVEENFAE-PCFLHNFFNREDYSGDPVAVKVIYGDTDSVF 762
Query: 678 VQFGVPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEK 736
V + T A ++ G A YI+ F+ PIKLEFEKV+ ++I KKRY G E
Sbjct: 763 VCYRGVTAAALIERGPSLAHYITQCLFVDPIKLEFEKVFGSLMMICKKRYIGKIVGETE- 821
Query: 737 FDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP-GAVQYVKSTISDLLM------ 789
+ KG++ VR+ +C VKN+ + + + D ++ AVQ + T+ +L M
Sbjct: 822 ---LSMKGVDLVRKTSCEFVKNVTRDIIQLLFDDPEVSRAAVQLSRLTLDELKMQGVPPG 878
Query: 790 -----------------NRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATA 831
+R + LV++ L+K Y + H+ + +R+ R +
Sbjct: 879 FGRVIQRLSQARDELYTSRARVEELVLSSVLSKDVSLYKQSNLPHIAVIKRLAAR-SEEL 937
Query: 832 PNVGDRVPYVIIKAA----KGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
P VGDRV YV+ A G + YE +EDP YV E+ +PI Y + Q+ K + +
Sbjct: 938 PVVGDRVFYVLTAPADGRSSGVRNYEIAEDPTYVREHGVPIHADKYFD-QVIKSVTNVLS 996
Query: 888 PIL 890
P+
Sbjct: 997 PVF 999
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 129/299 (43%), Gaps = 38/299 (12%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI--SHFHQILEGRMREANRN 173
S ++R FG T +GHS+C V G YFY G D+ S + E RM
Sbjct: 121 SGNVLRFFGATEQGHSICVNVFGQRSYFYCEYADGDLLRDLLASVSDLVSEPRM------ 174
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC-RGILDRGIQLDGLGMK 232
+ I VQK SI Y ++ ++ +M +L+ GI +
Sbjct: 175 ----AYALTITPVQKMSIYGYGTSPIPNLFRVSISNWSMAKKIGEYLLENGIPV------ 224
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
YE V R +ID + W V +Y S C E DC +DI++
Sbjct: 225 ----YEIRVDPLTRLVIDKKMTTFGW--CCVHRYEWRIHKSSTCDFEIDCDVADIMAVSD 278
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQG-----EKQPFIR- 344
+ + +R LSFDIEC G FP E T D VIQ++ + G E F
Sbjct: 279 D---TSWPVYRCLSFDIECMSASGGFPAAEQTDDIVIQISCVCYNTGGTGCEENTVFGTS 335
Query: 345 --NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++ T+ SCAP+ GVDV F +E ++LL + F + P + GYNI FD Y++ +
Sbjct: 336 GLHLFTIGSCAPLAGVDVYEFPSEYEMLLGFLIFFQRYSPCFVTGYNINSFDFKYILTR 394
>gi|367041926|ref|XP_003651343.1| hypothetical protein THITE_2111493 [Thielavia terrestris NRRL 8126]
gi|346998605|gb|AEO65007.1| hypothetical protein THITE_2111493 [Thielavia terrestris NRRL 8126]
Length = 1752
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 216/709 (30%), Positives = 338/709 (47%), Gaps = 83/709 (11%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS--IISDLQ-NGNAETRR 421
T R V+ WR E++ ++ Y++ + +L+ + H+S ++D +G
Sbjct: 1032 TGRHVINVWRAMRGELN---LLQYSMENV-VWHLLHRRIPHYSWRTLTDWYLSGRPGDLS 1087
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
++ Y L+ L +L+ I E AR+ GV + SRG KV S + R AK +
Sbjct: 1088 KVLRYYLRRTRLDIEILEANELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1147
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-- 537
N L+ P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST
Sbjct: 1148 NFLLISPSRKQVGAQNALECLPLVMEPQSAFYTSPVLVLDFQSLYPSVMIAYNYCYSTCL 1207
Query: 538 --LVTPEDARKLN------------LPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
+V+ KL L + +N P+G + K ++K +L ++L E+L
Sbjct: 1208 GRIVSWRGTNKLGFTEYKRREGLLRLLKDYINIAPNGIMYTKPEIRKSLLAKMLTEILET 1267
Query: 584 RKRAKADLKEAKD--PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K+ +KE KD L+K +L RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1268 RVMVKSGMKEDKDDKTLQK-LLHNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQT 1326
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
GR+ +E + +V + NAEV+YGDTDS+ V T E A ++G E A+ I+
Sbjct: 1327 GRETLERAIAYIH----SVERW--NAEVVYGDTDSLFVYLKGRTREQAFEIGAEMAEEIT 1380
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+P+KL+FEKVY+P +L++KKRY G Y + + + D KGIETVRRD + +
Sbjct: 1381 KMNPRPVKLKFEKVYHPCVLLAKKRYVGYKYESREQTVPEFDAKGIETVRRDGTPADQKI 1440
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL---TKTGDDYEVKAAH 816
+ L + D+ +Y +S S ++ + + + + T +G A
Sbjct: 1441 EEKALKILFETADLSQVKEYFQSQCSKIMRGSVSVQDFCFAREVKLGTYSGKGPGPPGAL 1500
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLE 875
+ +RM + DA P G+RVPYV+I A GA+ +R P +L N + +D YY+
Sbjct: 1501 IS-TKRMLE-DARAEPQYGERVPYVVISGAPGARLIDRCVSPEDLLNNPHASLDAEYYIS 1558
Query: 876 NQISKPLLRIFEPILKNASK---ELLSGDHTRSIS------------------ISTPSNS 914
I PL RIF + N E+ H R + + +N
Sbjct: 1559 KNIIPPLERIFNLVGANVRAWYDEMPKVQHVRRLETTSALSALTALAANSSNNNNNTTNK 1618
Query: 915 GIMKFAKRQLSCIGCKALISNG------------------TLCSHCKGREAELYCKTVSQ 956
++F SCI C ++ LCS C A + ++
Sbjct: 1619 KTLEFFMNSASCIACGVKMAKPPIAAAAAAADAHDDHHLRPLCSRCASDPATTMAQLQAR 1678
Query: 957 VQELEVLFGRLWTQCQECQG--SLHQDVLCTSRDCPIFYRRKKAQKDMA 1003
+ E + + CQ C G L +DV C SRDCP+FY R K + +A
Sbjct: 1679 LNAEERKYADVVRVCQSCAGFAPLERDVPCDSRDCPVFYTRVKQRARVA 1727
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF---------HQILEGRMRE 169
+IR+FG T G VC +HG PY YI + +S + H + R+
Sbjct: 42 VIRVFGSTETGQKVCAHIHGAFPYLYIEYGGPLDKATVSEYIYRLHLSIDHALAVSYRRD 101
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLDG 228
R+ + FV I +V + + +Y F LKI + P ++ +L +G+ +
Sbjct: 102 QYRDRQ--SFVARITLV--KGVPFYGFYVGYRFYLKIYMLNPVVMTRLADLLQQGLIMG- 156
Query: 229 LGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ F YE+++ + L+FM D N+ G ++++ ++R
Sbjct: 157 ---RKFQPYEAHLQYLLQFMTDYNLYGCDYLDAGKVRFR 192
>gi|168804095|ref|YP_001687027.1| DNA polymerase-like protein [Glossina pallidipes salivary gland
hypertrophy virus]
gi|146164283|gb|ABQ08852.1| DNA polymerase-like protein [Glossina pallidipes salivary gland
hypertrophy virus]
Length = 953
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 189/534 (35%), Positives = 281/534 (52%), Gaps = 60/534 (11%)
Query: 400 EKEDVHHSIISDLQN-GNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPI 458
+K D+ + IS + G+ E L YC DA L LL N +A + +PI
Sbjct: 385 KKLDIDYKNISVFHDRGSKEDCHHLLDYCAVDAELCNSLLINRSTYSNVFAVAHICHIPI 444
Query: 459 SFLLSRGQSIKVLSQLLRKAKQKNL-VIPNVK-QAGSEQGTYEGATVLEARAGFYEKPIA 516
+++ RGQ I++ S + ++++ IP V + + YEGA V+E + GFY IA
Sbjct: 445 RYVIDRGQQIRIYSMMCEYIWRQDIYTIPLVTGRRVQSKYNYEGARVIEPKKGFYNTAIA 504
Query: 517 TLDFASLYPSIMMAYNLCYSTLVT-----PEDARKLNLPP----EC-VNKTPSGETFVKS 566
TLDFASLYPSIM+ YN+CY+TL+ P +NL C + S FV
Sbjct: 505 TLDFASLYPSIMIGYNMCYTTLIQGITTPPGHVDSINLVKYNGLNCRIVPGTSRVAFVDC 564
Query: 567 NLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVG 626
+ ++GILP IL+ LL +R + +K D E A++D QL K+ ANS YG+ A+
Sbjct: 565 SEREGILPSILKVLLQSRAEVRKKMKTITDKDELALMDSMQLGFKLCANSAYGYMAASTS 624
Query: 627 QLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVE 686
+LPCI+ISSSVT GR ++ + + ++KF +VIYGDTDSVMV + +V
Sbjct: 625 KLPCIDISSSVTCIGRFLLTAIETICKEKFK--------KDVIYGDTDSVMVDTKLISVH 676
Query: 687 AAMKLGREAADYISGTFIKP-IKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGI 745
A+ LG+E A + P +KLEFEKVY PYLLI KKRY G +WT PE +DK+DTKG+
Sbjct: 677 EALSLGKEMAKICTELLNLPSLKLEFEKVYMPYLLICKKRYIGAHWTKPEMYDKIDTKGV 736
Query: 746 ETVRRDNCLLVKNLVTECLHKIL----------VDRDIPGAVQYVKSTISD--LLMNRMD 793
ET RRDNC L++ ++ +H + ++ ++ + KS ++D +++ D
Sbjct: 737 ETARRDNCKLLQIILKIIIHDSMNNGLDKVFEKIENELLPFSELWKSYLNDNCFKLDKQD 796
Query: 794 --------LSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKA 845
+ +++K TK DY HV + +R+ R N G+R+ YVI A
Sbjct: 797 KTKITSEIIEKFIMSKKYTKM--DYVSIQPHVSIIKRLSNRQF----NHGERIEYVI--A 848
Query: 846 AKGAKAYERSED----------PIYVLENNIPIDTHYYLENQISKPLLRIFEPI 889
+K ++ + P VLE N+ I YY+ Q+ P LR EP+
Sbjct: 849 SKVLILTDKKQPDKLLSDMAFLPEEVLEKNLYIHIPYYINGQVLVPALRFIEPM 902
>gi|448934288|gb|AGE57842.1| DNA polymerase [Acanthocystis turfacea Chlorella virus NTS-1]
Length = 902
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 286/512 (55%), Gaps = 25/512 (4%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ I + G+AE R +A Y +D LP +LL KL + EMA +P+
Sbjct: 359 QKDDLPAMKIFEKFEGDAEDRAVIAKYAAQDTLLPLKLLSKLAIFEDVAEMANAVKIPMD 418
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L KA++ IP+ K A +G +EGATVLE + G Y +PIA LD
Sbjct: 419 WVGFRGQQVRAFSCLFGKAREMGYAIPDNK-AWPAEGKFEGATVLEPKKGAYFEPIAALD 477
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFVKSNLQKGILPEILE 578
FASLYPSI+ A+N+ T+V + + N+P + +G F S KG++P +L+
Sbjct: 478 FASLYPSIIRAHNMSPETIVM--EPKFANVPGVEYYEIQTGIGKFRYSQKSKGVVPALLD 535
Query: 579 ELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L RK AK + +A D ++A+ D Q + K+ NSVYGF GA+ G +PC+ I++
Sbjct: 536 DLAKFRKNAKKLMAQAHKEGDDFKEALYDASQRSYKVVMNSVYGFLGASKGFIPCVPIAA 595
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR-- 693
SVT+ GR MI+ + + + V+YGDTDS+MV+ +P + +
Sbjct: 596 SVTATGRNMIDVAARRALELLP-------GSVVVYGDTDSIMVKMKLPEGKDQNNINDHF 648
Query: 694 EAADYISGTFIK----PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVR 749
E A +++G K P LEFEK+YYPY+L SKKRYA + + +P + K+D KG+ VR
Sbjct: 649 EVAKWLAGEITKEYKAPNDLEFEKIYYPYILYSKKRYAAIKFEDPNEKGKVDVKGLALVR 708
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD + ++++ E L IL +D P AV+ + I +L N + V++K L +
Sbjct: 709 RDFSPITRDILKESLDTILFAKDTPTAVKDTREKIRKVLDNEYPMEKFVMSKTLKTNYAN 768
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAK--GAKAYERSEDPIYVLENNIP 867
+ H+ A ++ +R P+ G RVP+V ++ K R+EDP + +N +
Sbjct: 769 --MMQPHLITANKILERTGVPVPS-GARVPFVYVEDDDKIDLKQSMRAEDPTFAKDNGLV 825
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+D +Y+++Q+ KPL+ +F+P++++ KEL
Sbjct: 826 VDRLFYIDHQLLKPLVSLFDPLVEDPEKELFG 857
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 135/305 (44%), Gaps = 41/305 (13%)
Query: 98 IDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS 157
+D+ GD N + I +FG T +G S C ++ F P F + P
Sbjct: 6 VDWRSGDENGQFK---------ITMFGKTVDGKSSCVRIR-FTPSFLLEMPDSWSVPRQR 55
Query: 158 HFHQILEGRMR-EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC 216
F I E M+ A ++ +P VQ++S+ + K++ + A PTM A
Sbjct: 56 LF--ITETVMKYGAIKDMCLP--------VQRKSLWGFDNGKTRDMAQF--AFPTMEAMR 103
Query: 217 RGILDRGIQLDGLGMK-SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSY 275
+ G+K + YES+V +R + W+ V + + +S
Sbjct: 104 KA---------KYGLKGNHQVYESSVDPIIRLFHLRKLSPSGWVRV--SQSYPASTRVSR 152
Query: 276 CQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLV 333
C +E +C ++ + E + P I S+DIE R+ FP ++ D V Q+A
Sbjct: 153 CDIEVECNFTQV----GPSEVTATPPLVICSWDIETYSRERKFPLASNPDDYVTQIATSF 208
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
GE +PF R V L A + GV+++S E DV+ AW D I + DV+IGYN+ ++
Sbjct: 209 QRYGEAEPFKRVVFCLNDTAGVPGVEIVSCSQEADVINAWMDAITKEKTDVLIGYNVFQY 268
Query: 394 DLPYL 398
D Y+
Sbjct: 269 DWKYI 273
>gi|74194069|dbj|BAE36943.1| unnamed protein product [Mus musculus]
Length = 577
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 190/575 (33%), Positives = 292/575 (50%), Gaps = 38/575 (6%)
Query: 461 LLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATL 518
+L+RG +V S +LR AK N V P+++Q + ++E + FY + L
Sbjct: 1 VLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQMRAPLCVPLIMEPESRFYSNSVLVL 60
Query: 519 DFASLYPSIMMAYNLCYST-LVTPEDARK----------LNLPPEC-------VNKTPSG 560
DF SLYPSI++AYN C+ST L E+ K L +PP+ V +P+G
Sbjct: 61 DFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLRVPPDLLYQIRHDVTVSPNG 120
Query: 561 ETFVKSNLQKGILPEILEELLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYG 619
FVK +++KG+LP +LEE+L R K +K K D +L+ RQL LK+ AN +G
Sbjct: 121 VAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYKQDRALSRMLNARQLGLKLIANVTFG 180
Query: 620 FTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMV 678
+T A G++PCIE+ S+ R+ +E KLV D + A V+YGDTDS+ V
Sbjct: 181 YTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDT------KKWGARVVYGDTDSMFV 234
Query: 679 QFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKF 737
T E + K+G+E A+ ++ T +P+KL+FEKVY P +L +KKRY G +Y T +K
Sbjct: 235 LLKGATKEQSFKIGQEIAEAVTATNPRPVKLKFEKVYLPCVLQTKKRYVGYMYETLDQKE 294
Query: 738 DKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLL 797
D KGIETVRRD+C V ++ L + RDI QYV+ L+ + +
Sbjct: 295 PVFDAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVQRQCMKLVEGKASIQDF 354
Query: 798 VITKGLTKTGDDYEVKAA--HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERS 855
+ K + Y A +EL +M D + P VG+RVPYVII G +
Sbjct: 355 IFAKEY-RGSFSYRPGACVPALELTRKMLAYDRRSEPRVGERVPYVIIYGTPGLPLIQLI 413
Query: 856 EDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI---LKNASKELLSGDHTRSISIS-T 910
VL++ + ++ YY+ QI PL RIF I + + +EL + S S S
Sbjct: 414 RRRAEVLQDPTLRLNATYYITKQILPPLARIFSLIGIDVFSWYQELPTIQKATSSSRSEL 473
Query: 911 PSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQ 970
G + L C C L +G +CS C+ + + +++ELE +L
Sbjct: 474 EGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQPQHVAIILNQEIRELERKQEQLIKI 532
Query: 971 CQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
C+ C GS + + C S +CP+ ++ + +++++A
Sbjct: 533 CRNCTGSFDRHIPCVSLNCPVLFKLSRVNRELSKA 567
>gi|330926967|ref|XP_003301686.1| hypothetical protein PTT_13248 [Pyrenophora teres f. teres 0-1]
gi|311323405|gb|EFQ90238.1| hypothetical protein PTT_13248 [Pyrenophora teres f. teres 0-1]
Length = 1692
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 208/692 (30%), Positives = 330/692 (47%), Gaps = 63/692 (9%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQ----NGNAETR 420
T R ++ WR E++ ++ Y + +L+ K + H SDL NG
Sbjct: 981 TGRHMINIWRAMRGELN---LLQYTMENVVF-HLLHKR-IPHYQYSDLTTWYTNGRPRDL 1035
Query: 421 RRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
++ Y L +L+ + E AR+ GV ++SRG KV S + R AK
Sbjct: 1036 TKVVDYFTTRVQLNLEILEANDVVPRTSEQARLLGVDFFAVISRGSQFKVESTMFRIAKP 1095
Query: 481 KN--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
+N LV P+ KQ G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST
Sbjct: 1096 ENFILVSPSRKQVGQQNALECLPLVMEPQSAFYTSPVLVLDFQSLYPSVMIAYNYCYSTC 1155
Query: 539 VT----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLA 582
+ + + L L + +N P+G +VK ++K +L ++L E+L
Sbjct: 1156 LGRIVNWRGRNKMGFMDFKREPQLLELVKDHINIAPNGMMYVKPEMRKSLLAKMLGEILE 1215
Query: 583 ARKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1216 TRVMVKSGMKQDKDDKTLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQT 1275
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
GR+ +E L+ + AEV+YGDTDS+ + + + A +G E I+
Sbjct: 1276 GRETLEKAIALIH------ATEKWGAEVVYGDTDSLFIHLKGRSKDEAFTIGEEITAAIT 1329
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+PIKL+FEKVY+P +L++KKRY G Y +K + D KGIETVRRD + +
Sbjct: 1330 AANPQPIKLKFEKVYHPCVLLAKKRYVGFKYEHRNQKEPEFDAKGIETVRRDGTPAEQKI 1389
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL---TKTGDDYEVKAAH 816
+ L + D+ +Y + S ++ R+ + + K + T +G A
Sbjct: 1390 EEKALKLLFRTADLSQVKRYFQEQCSKIMEGRISIQDFLFAKEVKLGTYSGRGPPPPGAL 1449
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYYLE 875
+ A + D T P G+RVPYV+I A GA+ +R P +L+N+ + +D YY+
Sbjct: 1450 I--ATKRMLADPRTEPQYGERVPYVVITGAPGARLIDRCVSPETLLKNDHLELDAEYYIS 1507
Query: 876 NQISKPLLRIFEPILKNASK---ELLSGDHTRSISISTPSNSGIMKFAKRQL---SCIGC 929
+ PL RIF + N + E+ R+ISI S S K + + +C+ C
Sbjct: 1508 KNLIPPLERIFNLVGANVRQWYDEMPKIQRIRNISIPVGSKSDGRKTLESYMKSSNCLVC 1567
Query: 930 KALISNGT--------------LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQ 975
++ +++ T LC+ C R A +V E + C+ C
Sbjct: 1568 RSKLASPTQQPGAQTSPYAVLPLCTKCIKRPAHSLLALKYRVLNSETRVAEVDAVCRRCA 1627
Query: 976 G-SLHQDVLCTSRDCPIFYRRKKAQKDMAEAK 1006
+ + V C +RDCP+FY R K +A K
Sbjct: 1628 NLAPGEQVRCDNRDCPVFYTRIKECSKLAAIK 1659
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 83/211 (39%), Gaps = 45/211 (21%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF---------HQILEGRMRE 169
+IR FG T G VC +HG PY Y+ + + + H + R
Sbjct: 42 VIRAFGATETGQKVCAHIHGALPYLYLEYNGDLEKHVVDSYIVDLRTSIDHALASAYRRN 101
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL 229
A + +V HI +V+ Y + FLK+ + P + +L +G L+
Sbjct: 102 ACDGKSI--YVGHITLVKGVPFFGY-SVGYKTFLKVYMLNPMHMTRFADLLHQGAILN-- 156
Query: 230 GMKSFMTYESNVLFALRFMIDCNIVGGNWIEV-------PVGKYRKTAKTL--------- 273
+ F YES++ + L++M D N+ G ++I+ PV + T+
Sbjct: 157 --RVFQPYESHLQYILQWMCDYNLYGCDYIDCAKVQFRGPVPDSEEIDTTVHKWHDASIP 214
Query: 274 -------------SYCQLEFDCLYSDIISRH 291
S+C LE D DI++RH
Sbjct: 215 NELMAEADQYPRQSHCTLEVDICVQDILNRH 245
>gi|6552717|gb|AAF16520.1|AF191042_1 DNA polymerase [porcine lymphotropic herpesvirus 1]
Length = 1004
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 182/539 (33%), Positives = 281/539 (52%), Gaps = 54/539 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KED+ + I L GNA R RL +YC++D+ L LL M E+A++ +P+
Sbjct: 455 KKEDMSYKEIPALFKGNANDRARLGLYCIQDSVLVMDLLKFFMTHIEISEIAKIANIPMR 514
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+++ GQ I+V S LL AK + ++P + Q G+ QG Y+GATV+ +GFY P+ +D
Sbjct: 515 RVITDGQQIRVFSCLLASAKNRGYILP-MPQNGNFQG-YQGATVITPLSGFYNTPVLVVD 572
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKT---PSGET-FVKSNLQKGILPE 575
FASLYPSI+ A+NLCYSTL+ ED K E +T SG FVK ++ + +L
Sbjct: 573 FASLYPSIIQAHNLCYSTLIHHEDLHKYPQLKEEDYETFLISSGPVHFVKKHISESLLSN 632
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L LA RK + +L DP + +LD +QLA+K++ N+VYGFTG G LPC++I+
Sbjct: 633 LLTTWLAKRKMIRKELAACADPKLRTILDKQQLAIKVTCNAVYGFTGVASGMLPCLKIAE 692
Query: 636 SVTSYGRQMIEHTKKLVED-------KFTTVG-------GYEHNAEVIYGDTDSVMVQFG 681
++T GR M+E TK VE+ VG + +VIYGDTDS+ +
Sbjct: 693 TITMQGRAMLEKTKVFVENLSHEDLHSICKVGFMPQSPNSIDKPFKVIYGDTDSLFINCP 752
Query: 682 VPTVEAAMKLGREAADYISG-TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM 740
++ + G E A +I+ F+ PIKLE EKV+ LL++KKRY G+ + K+
Sbjct: 753 RYNMDQIVAFGDELAQHITERLFVSPIKLESEKVFGCLLLLTKKRYIGILSSG-----KI 807
Query: 741 DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------ 776
KG++ VR+ C V+ LH +L D + A
Sbjct: 808 LMKGVDLVRKTACTYVQETCKAVLHLVLNDNTVKEAANLLSKRKISRCFEEGLPEGFMKI 867
Query: 777 VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVG 835
+ + + DL NR+ + L+ + L K Y+ H+ + +++ R+ P V
Sbjct: 868 IDILNAAYKDLSANRVPIQTLIYSTELNKDFSCYKSYNLPHLAVYKKIILRNEE-PPQVH 926
Query: 836 DRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNAS 894
DR+ YV I KG+ E +EDP +V NNIPI + Y + +I + I + + +N +
Sbjct: 927 DRISYVFIN-GKGSLISEMAEDPAFVEANNIPIASDLYFD-KIVHGVANILQCLFENNT 983
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 148/306 (48%), Gaps = 30/306 (9%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
++++FG T + SVC V G YFY D + H I++ M E +S+
Sbjct: 120 VLKLFGRTSDDRSVCVNVFGQNVYFY-----AYSEADSYNIHHIIQQTMYE--NSSRQCN 172
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
F + KR + KI ++ M++ IL ++ G ++ +E
Sbjct: 173 FTV---VKTKRKFLDTFDTAEHEVYKITLSSYHMMS----ILSNKLRQCG-----YLIFE 220
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
+NV RF+ D + W R SY LEFDC SD+ S H + +
Sbjct: 221 ANVDVVSRFITDNDFCTFAWYSCKNAMPRLGQFRDSYTSLEFDCKVSDL-SIHRDKNY-- 277
Query: 299 MAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
++I++FDIEC G +G FP + D +IQ++ ++ G+ + + +++L +C+PI
Sbjct: 278 WPHYKIMAFDIECLGEQG-FPNASRDGDMIIQISCIIWTLGQDDDYDKILLSLGTCSPIT 336
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGN 416
+ F +E D+L A+ IR+ D +++ GYNI FD PY++++ ++ ++I N +
Sbjct: 337 NTTIYEFPSELDMLYAFCTMIRDYDVEIITGYNISNFDFPYILDRANMVYNI-----NPD 391
Query: 417 AETRRR 422
A TR +
Sbjct: 392 AYTRTK 397
>gi|452837061|gb|EME39004.1| hypothetical protein DOTSEDRAFT_75635 [Dothistroma septosporum NZE10]
Length = 1701
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 207/687 (30%), Positives = 332/687 (48%), Gaps = 55/687 (8%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R + WR E++ ++ Y + +L+ K H+S + S Q+
Sbjct: 1003 TGRHTINIWRAMRSELN---LLQYTMENVVF-HLLHKRVPHYSFQTLTSWYQSKKPRDLV 1058
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
++ Y + L +LD I E AR+ GV + SRG KV S + R AK +
Sbjct: 1059 KVLDYLITRTKLDFDILDANELIPRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKPE 1118
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
+ V+ P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1119 SFVLVSPSRKQVGAQNALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTCL 1178
Query: 540 TP------------EDARK----LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
D ++ L L + +N P+G +VK ++K +L ++L E+L
Sbjct: 1179 GRITEWRGTNKMGFADFKRAPGLLELVKDKLNIAPNGMMYVKPEMRKSLLAKMLGEILET 1238
Query: 584 RKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1239 RVMVKSGMKVDKDDKTLQQLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTG 1298
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + +V + AEV+YGDTDS+ V T + A K+G E A ++
Sbjct: 1299 RETLEKAIAFIH----SVKRW--GAEVVYGDTDSLFVYLKGRTKDDAFKIGDEIAKAVTD 1352
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLV 760
+PIKL+FEKVY+P +L++KKRY G + +P++ + D KGIETVRRD + +
Sbjct: 1353 MNPRPIKLKFEKVYHPCVLLAKKRYVGFKYESPKQTEPDFDAKGIETVRRDGTPAEQKIE 1412
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + D+ +Y ++ + ++ R+ + K + T D +
Sbjct: 1413 EKALKLLFRTSDLSQVKKYFQTQCTKIMAGRISVQDFCFAKEVKLGTYADKGPPPPGALI 1472
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP-IDTHYYLENQI 878
A R RD P G+RVPYV+I A GA+ +ER +P ++ + +D YY+ +
Sbjct: 1473 ATRRMLRDPRAEPQYGERVPYVVIAGAPGARLWERCVEPERLINDEYAELDAEYYINKNL 1532
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSI-SISTPSNSGIMKFAKRQLS-------CIGCK 930
PL RIF + N + I ++ P + AK+ + C+ C+
Sbjct: 1533 IPPLERIFNLVGANVRHWYDEMPKLQRIRTLGGPRDGDTATKAKKTMESYMGSSLCLVCR 1592
Query: 931 ---ALISNGT------LCSHCKGREAELYCKTVSQ-VQELEVLFGRLWTQCQECQGSLHQ 980
A +S + LCS C+ ++ + + +Q+ EV + C+ C
Sbjct: 1593 TKLAPVSAASTEIELPLCSACRHKQTSRTLIVLREKLQKAEVKARDMQDVCKSCSNMAFD 1652
Query: 981 D-VLCTSRDCPIFYRRKKAQKDMAEAK 1006
D V C SRDCP+FY R KA + AK
Sbjct: 1653 DQVRCDSRDCPVFYSRVKADTQLRVAK 1679
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 89/225 (39%), Gaps = 47/225 (20%)
Query: 105 SNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF----- 159
+ R+ LP +IR+FG T G VC VHG PY Y+S + + +
Sbjct: 37 TQRDKLP----QVPVIRVFGSTETGQKVCAHVHGALPYLYVSYQESTDKQHVDTYISQLR 92
Query: 160 ----HQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVAS 215
H + R + + FV HI +V+ Y + +LKI + P +
Sbjct: 93 NSIDHALALSYRRNPYEDPRKSAFVAHISLVKGVPFFGY-NVGFKYYLKIYLLNPMHMTR 151
Query: 216 CRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL-- 273
+L +G L + F YE+++ + L++M D N+ G +IEV ++R+
Sbjct: 152 FSDLLQQGAIL----AQPFQPYEAHLQYLLQWMCDFNLYGCAYIEVDKPRFREPVPLWDE 207
Query: 274 ---------------------------SYCQLEFDCLYSDIISRH 291
S+CQ+E D DI++RH
Sbjct: 208 LDDPAHLWHDRSISPDQILDIERYPRQSHCQIELDFRVEDILNRH 252
>gi|449302023|gb|EMC98032.1| hypothetical protein BAUCODRAFT_120942 [Baudoinia compniacensis UAMH
10762]
Length = 1737
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 196/627 (31%), Positives = 305/627 (48%), Gaps = 47/627 (7%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y + L +LD I E AR+ GV + SRG KV S + R AK ++ V+
Sbjct: 1099 YLITRTVLDLEILDANELIPRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKPESFVL 1158
Query: 486 --PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPE 542
P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYNLCYST L
Sbjct: 1159 VSPSRKQVGAQNALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNLCYSTCLGRIT 1218
Query: 543 DARKLN---------------LPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
D R N L + +N +P+G +VK ++K +L ++L E+L R
Sbjct: 1219 DWRGTNKLGFADFKREPGLLELVKDKINISPNGMMYVKPEMRKSLLAKMLGEILETRVMV 1278
Query: 588 KADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K+ +K K D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+ +
Sbjct: 1279 KSGMKVDKGDKTLQQLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTGRETL 1338
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E L+ T G AEV+YGDTDS+ V + A ++G + A ++ +
Sbjct: 1339 EKAIALIH--HTARWG----AEVVYGDTDSLFVSLRGRSKAEAFEIGNQIAKAVTDMNPR 1392
Query: 706 PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G + +P + + + D KGIETVRRD + + + L
Sbjct: 1393 PVKLKFEKVYHPCVLLAKKRYVGFKYESPSQTEPEFDAKGIETVRRDGTPAEQKIEEKAL 1452
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERM 823
+ D+ Y + + ++ + + K + T D +A R
Sbjct: 1453 KLLFRTSDLSQVKAYFQKQCAKIMGGQFSIQDFCFAKEVKLGTYADKGPPPPGALIATRR 1512
Query: 824 RKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYYLENQISKPL 882
RD T P G+RVPYV+I A GA+ +ER +P ++ + +D YY+ + PL
Sbjct: 1513 MLRDPRTEPQYGERVPYVVIAGAPGARLWERCVEPERLINDERAELDAEYYISKNLIPPL 1572
Query: 883 LRIFEPILKNASKELLSGDHTRSIS-ISTPSNSGIMKFAKRQLS------CIGCKALI-- 933
RIF + N + + I + P + I+K K S C+ C+A +
Sbjct: 1573 ERIFNLVGANVRQWYDDMPKVQRIRMLGGPRDGEIVKGKKTMESYMGSSLCLACRARLPP 1632
Query: 934 -------SNGTLCSHCK-GREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLC 984
LC C+ R E ++Q+ E G + C+ C S +V C
Sbjct: 1633 IRPEDAEQALPLCQRCREERRQETLLTLRRKLQKAEKKVGDMHGVCRSCANLSPDDEVRC 1692
Query: 985 TSRDCPIFYRRKKAQKDMAEAKLQLDR 1011
SRDCP+ Y R K+ ++ A+ L +
Sbjct: 1693 DSRDCPVMYSRVKSDTQLSVARSGLGK 1719
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 84/214 (39%), Gaps = 46/214 (21%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF-----HQI-----LEGRMR 168
IIR+FG T G VC +HG PY IS D + + H I L R
Sbjct: 80 IIRVFGATETGQKVCAHIHGALPYLLISYAGSPDADQVEKYIATVRHSIDHALALSYRRN 139
Query: 169 EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDG 228
+ N++ FV HI +V+ Y + +LKI + P + +L +G L
Sbjct: 140 PYDNNARNSTFVAHISLVKGVPFFGY-NVGYRYYLKIYLLNPLHMTRFADLLLQGAILHQ 198
Query: 229 LGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT---------------- 272
+ YE+++ F L++M D N+ G +IEV K R A
Sbjct: 199 V----IQPYEAHLQFLLQWMCDFNLYGCAYIEVKAEKVRWRAPVPEFEELENPGHFWHDR 254
Query: 273 ---------------LSYCQLEFDCLYSDIISRH 291
S+CQLE D DI++RH
Sbjct: 255 SIPPGSILDEQRYPRQSHCQLELDIRVEDILNRH 288
>gi|297841441|ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
lyrata]
gi|297334443|gb|EFH64861.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
lyrata]
Length = 1899
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 210/675 (31%), Positives = 324/675 (48%), Gaps = 50/675 (7%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK-EDVHHSIISD-LQNGNAETRRRLA 424
R VL AWR EV ++ Y I L +K + + ++++ +G A R R
Sbjct: 1215 RIVLNAWRLIRGEVKLNM---YTIEAVSEAVLRQKIPSIPYKVLTEWFSSGPAGARYRCI 1271
Query: 425 VYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL- 483
Y ++ L ++ +L I E+ARV G+ +LSRG +V S LLR A +N
Sbjct: 1272 EYVVRRTNLNLEIMSQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1331
Query: 484 -VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE 542
+ P +Q S+ V+E + FY+ P+ LDF SLYPS+++AYNLC+ST +
Sbjct: 1332 AISPGNQQVASQPAMECVPLVMEPESAFYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKL 1391
Query: 543 DARKLNL--------------PPECVNKTPSGETFVKSNLQKGILPEILEELLAAR---K 585
K+N + +TP+ +V +++GILP +LEE+L+ R K
Sbjct: 1392 AHLKMNTLGVSSYSLDLGVLQDLNQILQTPNSVMYVPPEVRRGILPRLLEEILSTRIMVK 1451
Query: 586 RAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQM 644
+A L ++ L + + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 1452 KAMKKLTPSEAVLHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1510
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
+E V NA V+YGDTDS+ V TV+ A +G+E A I+
Sbjct: 1511 LEKAISFVN------ANDSWNARVVYGDTDSMFVLLKGRTVKEAFVVGQEIASAITEMNP 1564
Query: 705 KPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTEC 763
P+ L+ EKVY+P L++KKRY G + +P++ + + D KGIETVRRD C V + +
Sbjct: 1565 HPVTLKMEKVYHPCFLLTKKRYVGYSYESPDQNEPIFDAKGIETVRRDTCEAVSKTMEQS 1624
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVEL 819
L + I Y+ +L R+ L V K G T D + A +
Sbjct: 1625 LRLFFEKKSISKVKSYLYRQWKRILSGRVSLQDFVFAKEVRLGTYSTRDSSLLPPAAIVA 1684
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP--IDTHYYLENQ 877
+ MR D T P +RVPYV+I GA+ + DP+ +L+ + P ++ YY+ Q
Sbjct: 1685 TKSMRT-DPRTEPRYAERVPYVVIHGEPGARLVDMVVDPLVLLDIDTPYRLNDLYYINKQ 1743
Query: 878 ISKPLLRIFEPILKNASKELLSGDH-TRSISISTP---SNSGIMKFAKRQLS--CIGCKA 931
I L R+F + + ++ L TRS P NS + LS CI C
Sbjct: 1744 IIPALQRVFGLLGADLNQWFLEMPRLTRSSLGQRPLSSKNSHKTRIDYFYLSKHCILCGE 1803
Query: 932 LIS-NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGS---LHQDVLCTSR 987
++ + LC+ C ++ V + +LE L T C+ C G + V C S
Sbjct: 1804 VVQESAQLCNRCLKNKSAADATIVWKTSKLEREMQHLATICRHCGGGDWVVQCGVKCNSL 1863
Query: 988 DCPIFYRRKKAQKDM 1002
C +FY R+K QK++
Sbjct: 1864 ACSVFYERRKVQKEL 1878
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 16/160 (10%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQ-----GMGPDDISHFHQI-LEGRMREANR 172
+IRI+G T G C +H PY YI C + G D + + LE ++
Sbjct: 46 VIRIYGSTPAGQKTCLHIHRALPYLYIPCSEIPLEHHKGADGSTLALSLELEKALKLKGN 105
Query: 173 NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVV-----ALPTMVASCRGILDRGIQLD 227
+ Q V E+V+ + Y + + F+KI + P VA +L G L
Sbjct: 106 AASKRQHVHDCEIVRAKKFYGYHSTE-EAFVKIYLYPCNSYHPPDVARAASLLLAGAVLG 164
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
KS YES++ F L+F++D N+ G + + K+R
Sbjct: 165 ----KSLQPYESHIPFILQFLVDYNLYGMCHVHISKMKFR 200
>gi|326426951|gb|EGD72521.1| DNA polymerase zeta catalytic subunit [Salpingoeca sp. ATCC 50818]
Length = 2703
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 194/645 (30%), Positives = 318/645 (49%), Gaps = 59/645 (9%)
Query: 413 QNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLS 472
N +A R R+ + L A +L+ ++ FI E AR+ G+ ++SRG +V S
Sbjct: 2062 HNTHAPLRWRVCKHLLFRALSCLQLMYEINFIERTSEFARLFGILFYEVISRGSQFRVES 2121
Query: 473 QLLRKAKQKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMA 530
+LR A +N ++ P+ Q +++ +LE + FY P+ LDF SLYPS+M+A
Sbjct: 2122 IMLRIAHPRNFIMISPSKDQVRNQRAPEALPLILEPESKFYSSPVLVLDFQSLYPSMMIA 2181
Query: 531 YNLCYSTLV--TPEDARK--------------------LNLPP---------ECVNKTPS 559
YN+C+ST + P A + +LPP + V+ P+
Sbjct: 2182 YNICFSTCLGRVPGTATRRAAYGDGDAGGSGTKFGVSHFDLPPGLLSDLVDQDLVHICPN 2241
Query: 560 GETFVKSNLQKGILPEILEELLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVY 618
G F K L+ G+LP +L+E+L R K +KE+ +++ RQL LK+ AN Y
Sbjct: 2242 GVMFCKRELRGGVLPVMLDEILRTRIMVKQSMKESDVSQAMHRLMNARQLGLKLIANVTY 2301
Query: 619 GFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVM 677
G+T AT G++PC++I+ S+ R+ + ++VE + NA+V+YGDTDS+
Sbjct: 2302 GYTSATFSGRMPCVDIADSIVQSARETLTRAMRMVETN------PKWNAKVVYGDTDSMF 2355
Query: 678 VQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKF 737
V T + A +G+E A+ ++ P+KL+FEKVY P +L +KKRY G + P +
Sbjct: 2356 VLLPGATKDQAFAIGKEIAEAVTAANPPPVKLKFEKVYLPCILQTKKRYVGYMYEKPSQR 2415
Query: 738 D-KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSL 796
+ + D KGIETVRRD C V ++ CL + RD+ Y++ +L +R++L+
Sbjct: 2416 EPEFDAKGIETVRRDVCPAVAKIMERCLRMLFETRDLSKIKAYLQREWMKILTSRINLAD 2475
Query: 797 LVITKGLTKTGDDYEVKA--AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYER 854
V K + + Y V+A A +E+A R+ + D P V +RVPYVI+ A
Sbjct: 2476 FVFAKEY-RGRESYSVRACVAALEIANRLSRLDPRAEPRVRERVPYVIVCGPPKATLISL 2534
Query: 855 SEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFE-------PILKNASKELLSGDHTRSI 906
P +L + + ++ YY++ QI PL R F P + K + + +
Sbjct: 2535 VRQPEELLADPGLRLNALYYIKKQIIPPLDRCFNLFGIYLTPWFQELPKVYRTANAFAAP 2594
Query: 907 SI---STPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVL 963
++ S I +F R C+ C L + G +C++CK AE + ++V E
Sbjct: 2595 QFGLHNSHQRSTIDQF-YRSRHCVICGEL-TQGAVCANCKRDPAEATVRLHARVTLTERE 2652
Query: 964 FGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKL 1007
L C+ C G +L +V C S CP+ Y+R + + ++
Sbjct: 2653 MAILKGICRRCMGFTLDNNVACVSVWCPVLYQRSRLHHKLKNVRV 2697
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 117 AAIIRIFGVTREGHSVCCKVHGFEPYFYIS-CPQGMGPDDISHFHQILEGRMREA 170
A +IR+FG T G CC VHG PY Y+ + GP D+ ++G + ++
Sbjct: 185 APVIRVFGTTPRGQKACCHVHGVYPYIYVPLIGRKPGPSDLLRMATAIDGALHKS 239
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 180 VRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYES 239
V +IE+V KR Y + Q FLKI + P +V +L G+ +G + +E+
Sbjct: 304 VANIEVV-KRINFYGYHEGEQDFLKISLINPWLVRRTADLLQEGV----IGNIFYQPFEA 358
Query: 240 NVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLS 274
++ + L+FM D N+ G N+I +R LS
Sbjct: 359 HIPYFLQFMTDYNLQGMNYIHTKHALFRTPLPELS 393
>gi|398388499|ref|XP_003847711.1| hypothetical protein MYCGRDRAFT_77946 [Zymoseptoria tritici IPO323]
gi|339467584|gb|EGP82687.1| hypothetical protein MYCGRDRAFT_77946 [Zymoseptoria tritici IPO323]
Length = 1595
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 201/622 (32%), Positives = 303/622 (48%), Gaps = 55/622 (8%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN--L 483
Y + L +LD I E AR+ GV + SRG KV S + R AK ++ L
Sbjct: 949 YFINRTKLDLEILDANELIPRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKPESFAL 1008
Query: 484 VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
V P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1009 VSPSRKQVGAQNALECLPLVMEPQSAFYSSPVLVLDFQSLYPSVMIAYNYCYSTCLGRIT 1068
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
K L L + +N +P+G +VK ++K +L ++L E+L R
Sbjct: 1069 NWRGTNKMGFADFQRTPGLLELTKDKLNISPNGMMYVKPAMRKSLLAKMLGEILETRVMV 1128
Query: 588 KADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K+ +K K D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+ +
Sbjct: 1129 KSGMKVDKADKTLQQLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTGRETL 1188
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E + +V + AEV+YGDTDS+ V T A K+G E A I+ +
Sbjct: 1189 EKAIAFIH----SVEAW--GAEVVYGDTDSLFVHLPGRTRADAFKIGDEIAAQITAMNPR 1242
Query: 706 PIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
PIKL+FEKVY+P +L++KKRY G + +P ++ D KGIETVRRD + + + L
Sbjct: 1243 PIKLKFEKVYHPCVLLAKKRYVGFKYESPKQEVPDFDAKGIETVRRDGTPAEQKIEEKAL 1302
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK--GLTKTGDDYEVKAAHVELAER 822
+ D+ Y +S + +L ++ + K L D + +R
Sbjct: 1303 KLLFRTADLSQVKSYFQSQCTKILHGKISVQDFCFAKEVKLGTYADKGPPPPGAIIATKR 1362
Query: 823 MRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDP-IYVLENNIPIDTHYYLENQISKP 881
M RD P G+RVPYV+I GA+ +ER +P V ++ +D YY+ + P
Sbjct: 1363 ML-RDPRAEPQYGERVPYVVIAGGPGARLWERCVEPERLVYDSQAELDAEYYINKNLIPP 1421
Query: 882 LLRIFEPILKNAS---KELLSGDHTRSISISTPSN----SGIMKFAKRQLS------CIG 928
L RIF + N +EL R + +TPS+ +G K K S C+
Sbjct: 1422 LERIFNLVGANVRTWWEELPKVQRMRLVGANTPSDADAVTGKGKGKKTMESYMASSLCLV 1481
Query: 929 CKALI--SNGT-------LCSHC-KGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-S 977
C+ + + GT LC C R A+ ++V + E + C+ C
Sbjct: 1482 CRTRLPPTTGTSTQDPLPLCPTCLHSRPAQTLLSLRAKVTKAEKKVADIEAVCRSCADLP 1541
Query: 978 LHQDVLCTSRDCPIFYRRKKAQ 999
++V C SRDCP+FY R KA+
Sbjct: 1542 AGEEVRCDSRDCPVFYSRVKAR 1563
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 82/211 (38%), Gaps = 43/211 (20%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF---------HQILEGRMRE 169
+IR+FG T G VC +HG PY Y+ + + + + + H + R
Sbjct: 46 VIRVFGATETGQKVCAHIHGAFPYLYVPYTESIEKNTLESYISTFRHSIDHALAISYRRN 105
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL 229
N + FV HI +V+ Y +LK+ + PT + +L +G +
Sbjct: 106 PYENPRNATFVAHISLVKGVPFFGYNVGHKY-YLKVYLLNPTNMTRFTDLLQQG----AI 160
Query: 230 GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL---------------- 273
+ F YE+++ + L++M D N+ G +IE +R
Sbjct: 161 MKQVFQPYEAHLQYLLQWMCDFNLYGCAYIETEKPHFRSPLPEWEDLDDPAHLWHDRSVA 220
Query: 274 -------------SYCQLEFDCLYSDIISRH 291
S+CQLE D D+++R+
Sbjct: 221 EKDVLDVERFPRQSHCQLELDIRVEDLLNRN 251
>gi|358384921|gb|EHK22518.1| hypothetical protein TRIVIDRAFT_191274 [Trichoderma virens Gv29-8]
Length = 1564
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 205/666 (30%), Positives = 326/666 (48%), Gaps = 47/666 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR EV+ ++ Y + + +L+ + H+S + S ++G A+
Sbjct: 893 TGRHMINIWRAMRGEVN---LLQYTMENV-VWHLLHRRIPHYSWKSLTSWHRSGRAQDLN 948
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
RL Y L +L+ I E AR+ GV + SRG KV S + R AK +
Sbjct: 949 RLLRYYRTRTRLDLEILESNELISRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1008
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ KQ G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1009 NFMLVSPSRKQVGQQNALECLPLVMEPQSAFYSSPLIVLDFQSLYPSVMIAYNYCYSTFL 1068
Query: 540 T-------------PEDARK---LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
E R+ L+L + +N P+G +VK+ ++K +L ++L E+L
Sbjct: 1069 GRITDWRGKSKMGFSEYKRQDGLLSLLGDHINIAPNGMMYVKAEVRKSLLAKMLTEILET 1128
Query: 584 RKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K+ +D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1129 RIMVKSGMKQDQDDKTLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTG 1188
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + +V + AEV+YGDTDS+ + + + A +G+E A I+
Sbjct: 1189 RETLERATAYIH----SVERW--GAEVVYGDTDSLFIYLKGRSRDEAFAIGQEIAQAITE 1242
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLV 760
KPIKL+FEKVY+P +L++KKRY G Y T + + D KGIETVRRD + +
Sbjct: 1243 RNPKPIKLKFEKVYHPCVLLAKKRYVGYKYETKDQTTPEFDAKGIETVRRDGTSAEQKIE 1302
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE--VKAAHVE 818
+ L + D+ Y + + ++ ++ + K + + G E + A
Sbjct: 1303 EKALRLLFETADLSQIKDYFRKQCNKVMRGKVSIQDFFFAKEV-RLGSYSENGLPPAGAL 1361
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQ 877
++ R +DA P G+RVPY++I A GA+ +R P +L N + +D YY+
Sbjct: 1362 ISARKMLKDARAEPQYGERVPYLVITGAPGARLIDRCVSPEELLRNPHWQLDADYYISKN 1421
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGT 937
+ PL RIF + N + + R I + + KR L A N +
Sbjct: 1422 LIPPLERIFNLVGANVRQWYDTMPKIRRI-----HRTKGLGHKKRTLEAYLRTA---NMS 1473
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C R S++ E + + CQ C+G ++V C S DCP+F+ R
Sbjct: 1474 LCRFCYARIPASLLTLQSRLTAAERKYDEILRVCQGCEGVGPLEEVGCDSHDCPVFWTRM 1533
Query: 997 KAQKDM 1002
K + M
Sbjct: 1534 KLKNKM 1539
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 111 PLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF----HQILEGR 166
PL++ +IRIFG T G VC VHG PY Y+ + D + F H ++
Sbjct: 36 PLNATRVPVIRIFGSTEFGQKVCAHVHGVFPYLYVEYDGNLNQDAVGAFIYRLHLSIDHA 95
Query: 167 MREANRNSKV---PQFVRHIEMVQKRSIMYYQQQKS-QPFLKIVVALPTMVASCRGILDR 222
+ + R + +FV I +V + I +Y + FLKI + P ++ +L +
Sbjct: 96 LSISYRRDQYGDKAKFVARITLV--KGIPFYGYSVGYKSFLKIYMFNPLVMTRLADLLQQ 153
Query: 223 GIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIE-------VPVGKYRKTAKTLSY 275
G+ + + F YE+++ + L+FMID N+ G +++E PV + T SY
Sbjct: 154 GVIMK----RKFQPYEAHLQYLLQFMIDYNLYGCDYVESSQTYFRSPVPAHHGNTATSSY 209
>gi|253745698|gb|EET01445.1| DNA polymerase delta, catalytic subunit [Giardia intestinalis ATCC
50581]
Length = 1299
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 158/397 (39%), Positives = 215/397 (54%), Gaps = 50/397 (12%)
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISK 723
H++ VIYGDTDSVMV+FGV + AM L + A+ Y++ +FI+PI LEFEKVY PYLL++K
Sbjct: 895 HDSVVIYGDTDSVMVKFGVDNIMEAMMLAKYASTYVTQSFIRPINLEFEKVYCPYLLLNK 954
Query: 724 KRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKST 783
KRYAG YWTNP DK+D+KG+E VRRDNC LV ++ + L + D A+ YVKS
Sbjct: 955 KRYAGQYWTNPFTPDKIDSKGLELVRRDNCRLVVIVMEKVLDILFNYSDPQRAINYVKSV 1014
Query: 784 ISDLLMNRMDLSLLVITKGLTKTGDDYEVK-AAHVELAERMRKRDAATAPNVGDRVPYVI 842
+ DL+ R+DLSLLVI+K LT++ + Y K HV LA RM +RD TAP VGDRVPYV+
Sbjct: 1015 VHDLISQRVDLSLLVISKALTQSVNSYTNKQQTHVNLAIRMTERDPMTAPKVGDRVPYVV 1074
Query: 843 IKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILK-----NASKEL 897
K K +ERSEDP Y + NN+PIDT YYL Q+ KP+ R+ + +L+ A+ +L
Sbjct: 1075 TLKDKACKLFERSEDPAYAISNNLPIDTDYYLHQQLEKPVSRLLKDVLRCSSEAEAADQL 1134
Query: 898 LSGDHTRSISI---------------------------STPSNSGIMKF--AKRQLSCIG 928
G H SI T +GIM K+ C+
Sbjct: 1135 FRGKHCVGPSIVFSRGDIGSALNTSSTSTGSSKPAKATKTSKQTGIMGMIAGKKVAKCMY 1194
Query: 929 CKALISNG------TLCSHC-KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD 981
C I++G LC C LY ++ E + + +C C G +
Sbjct: 1195 CNIRITDGQLYEDIMLCKSCLLTNRLSLYSHLQRELLLAEHRYRTVAVECMFCTGEISSH 1254
Query: 982 --------VLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
+ C+S DC +FY R K + D + + D
Sbjct: 1255 TGDIEDGLIPCSSSDCELFYARIKTRLDYKALRAKFD 1291
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 165/336 (49%), Gaps = 27/336 (8%)
Query: 89 QSIMFQQLDIDYVIGDSNRELLPLSSGS------AAIIRIFGVTREGHSVCCKVHGFEPY 142
+ I FQ +D+ V + L+P S S + +FG+TR+G SV V GF Y
Sbjct: 20 EDIEFQLIDVLDVNIPTQNCLVPKDSQSGKKAPLSTNYVLFGITRDGQSVSTVVTGFRHY 79
Query: 143 FYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPF 202
Y + P ++ + G EA+ + + ++ RSI ++ QK +
Sbjct: 80 LYAGTDTPLDPLELQLKLSLHLGF--EADGPTPITSIIQLPSTY--RSIYVFRVQKRHIY 135
Query: 203 LKIVVALPTMVASCRGI-LDRGIQLDGLGMKS--FMTYESNVLFALRFMIDCNIVGGNWI 259
KI + ++ RG LD I G+++ F YE+++ +RFM+D + G W+
Sbjct: 136 -KISFTDKGLYSTIRGFFLDNHIYNGKYGLRADKFELYEADLDPTVRFMVDTQLRGFAWV 194
Query: 260 EVPVGKYR-------KTAKTLSYCQLEFDCLYSDIIS-RHPEGEFSKMAPFRILSFDIEC 311
+P +Y K +T QL+ + Y+ +++ + + ++ AP R+LSFDIE
Sbjct: 195 CIPKERYTPLPTDAPKPLQTTMQIQLQTE--YTHLVALNYNDPCYAINAPIRVLSFDIES 252
Query: 312 AGRKGHFPEPTHDPVIQVAN---LVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERD 368
+G FP+ D +I + + ++T P + L SCAPIVG DV F+TER+
Sbjct: 253 VSLQGGFPDAASDYIITICSSLYILTQSTADTPHANIALVLHSCAPIVGADVFCFDTERE 312
Query: 369 VLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV 404
+LLA+ I+ DPD+ GYNI FD Y+ ++ +V
Sbjct: 313 LLLAFNYLIQLFDPDIFTGYNIDGFDFNYIFKRAEV 348
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 100/151 (66%), Gaps = 10/151 (6%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+DVH+S+I+ L N RRR+ YC+KD LP +L++KLM + N +E+ RV+G+
Sbjct: 445 QKDDVHYSMITPLFMQNEYGRRRITSYCIKDCKLPLKLMEKLMILVNTIELCRVSGLCGC 504
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIP-NVKQAGSEQGTY-------EGATVLEARAGFY 511
LL GQ I++LS L R + ++ +IP ++ G + EGATVL + GFY
Sbjct: 505 LLLYSGQQIRILSLLYRFSAAESYLIPYRMRTGGGHSAGFSGDSEGLEGATVLNPKRGFY 564
Query: 512 --EKPIATLDFASLYPSIMMAYNLCYSTLVT 540
++PIATLDF SLYP+I++A+NLCYST+++
Sbjct: 565 SDKQPIATLDFNSLYPTIIIAHNLCYSTMIS 595
Score = 126 bits (316), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 84/111 (75%), Gaps = 1/111 (0%)
Query: 547 LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGR 606
L+ E + TP F+K + GILP+IL+ LL ARK+AK D+K+A DPL K VL+GR
Sbjct: 677 LSASNELITVTPIKARFLKKTVFPGILPKILQVLLDARKKAKQDMKKATDPLAKDVLNGR 736
Query: 607 QLALKISANSVYGFTGA-TVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKF 656
QLALK+ ANS+YGFTGA T G+LP EISSS+T++GR+MI HTK +VE++F
Sbjct: 737 QLALKLIANSLYGFTGALTFGRLPSQEISSSITAFGREMINHTKNVVEERF 787
>gi|51556546|ref|YP_068180.1| rh87 [Macacine herpesvirus 3]
gi|6015023|sp|O71121.1|DPOL_RHCM6 RecName: Full=DNA polymerase
gi|2944240|gb|AAC05256.1| DNA polymerase [Macacine herpesvirus 3]
gi|31377963|gb|AAP50613.1| rh87 [Rhesus cytomegalovirus strain 68-1]
gi|389889508|gb|AFL03576.1| Rh87 [Macacine herpesvirus 3]
Length = 1035
Score = 272 bits (695), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 175/543 (32%), Positives = 281/543 (51%), Gaps = 63/543 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KED+ + I E R ++ YC++DA L + L + + F + +AR+ +P+
Sbjct: 468 QKEDMSYKDIPVKFISGCEGRAQVGKYCVQDAVLVKDLFNTINFHYEAGAIARLARIPMR 527
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQG----TYEGATVLEARAGFYEKPI 515
++ GQ I++ + LL + ++ ++PN K A + +Y+GATV E G+Y P+
Sbjct: 528 RVIFDGQQIRIYTSLLDECACRDFIMPNHKGADNSSEPTDVSYQGATVFEPEVGYYSDPV 587
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET-----FVKSNLQK 570
DFASLYPSI+MA+NLCYST V P PPE T E+ FVK+ ++
Sbjct: 588 VVFDFASLYPSIIMAHNLCYSTFVAPGGES----PPESDVLTVELESGLSYRFVKNTVRN 643
Query: 571 GILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPC 630
+L E+L + ++ R+ + ++ DP+++ +LD QLALK++ N+ YGFTG G +PC
Sbjct: 644 SVLSELLTKWVSQRRAVRETMRSCHDPVKRMLLDKEQLALKVTCNAFYGFTGVVNGMMPC 703
Query: 631 IEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHN-------------AEVIYGDTDSVM 677
+ I++S+T GR M+ T + VE+ F + HN +VIYGDTDSV
Sbjct: 704 LPIAASITRIGRDMLMRTSQFVEENFAE-PCFLHNFFNREDYSGDPVAVKVIYGDTDSVF 762
Query: 678 VQFGVPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEK 736
V + T A ++ G A YI+ F+ PIKLEFEKV+ ++I KKRY G E
Sbjct: 763 VCYRGVTAAALIERGPSLAHYITQCLFVDPIKLEFEKVFGSLMMICKKRYIGKIVGETE- 821
Query: 737 FDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP-GAVQYVKSTISDLLM------ 789
+ KG++ VR+ +C VKN+ + + + D ++ AVQ + T+ +L M
Sbjct: 822 ---LSMKGVDLVRKTSCEFVKNVTRDIIQLLFDDPEVSRAAVQLSRLTLDELKMQGVPPG 878
Query: 790 -----------------NRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATA 831
+R + LV++ L+K Y + H+ + +R+ R +
Sbjct: 879 FGRVIQRLSQARDELYTSRARVEELVLSSVLSKDVSLYKQSNLPHIAVIKRLAAR-SEEL 937
Query: 832 PNVGDRVPYVIIKA----AKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
P VGDRV YV+ + G + YE +EDP YV E+ +PI Y + Q+ K + +
Sbjct: 938 PVVGDRVFYVLTAPVDGRSSGVRNYEIAEDPTYVREHGVPIHADKYFD-QVIKSVTNVLS 996
Query: 888 PIL 890
P+
Sbjct: 997 PVF 999
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 129/299 (43%), Gaps = 38/299 (12%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI--SHFHQILEGRMREANRN 173
S ++R FG T +GHS+C V G YFY G D+ S + E RM
Sbjct: 121 SGNVLRFFGATEQGHSICVNVFGQRSYFYCEYADGDLLRDLLASVSDLVSEPRM------ 174
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC-RGILDRGIQLDGLGMK 232
+ I VQK SI Y ++ ++ +M +L+ GI +
Sbjct: 175 ----AYALTITPVQKMSIYGYGTSPIPNLFRVSISNWSMAKKIGEYLLENGIPV------ 224
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
YE V R +ID + W V +Y S C E DC +DI++
Sbjct: 225 ----YEIRVDPLTRLVIDKKMTTFGW--CCVHRYEWRTHKSSTCDFEIDCDVADIMAVSD 278
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQG-----EKQPFIR- 344
+ + +R LSFDIEC G FP E T D VIQ++ + G E F
Sbjct: 279 D---TSWPVYRCLSFDIECMSASGGFPAAEQTDDIVIQISCVCYNTGGTGCEENTVFGTS 335
Query: 345 --NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
++ T+ SCAP+ GVDV F +E ++LL + F + P + GYNI FD Y++ +
Sbjct: 336 GLHLFTIGSCAPLAGVDVYEFPSEYEMLLGFLIFFQRYSPCFVTGYNINSFDFKYILTR 394
>gi|255944163|ref|XP_002562849.1| Pc20g02960 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587584|emb|CAP85625.1| Pc20g02960 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1697
Score = 272 bits (695), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 299/599 (49%), Gaps = 44/599 (7%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEA 506
E AR+ G+ + +++RG KV S + R AK +N LV P+ KQ G + V+E
Sbjct: 1090 EQARLLGIDFASVITRGSQFKVESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVMEP 1149
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT----------------PEDARKLNLP 550
++ FY P+ LDF SLYPS+M+AYN CYST + R L L
Sbjct: 1150 QSDFYTSPLLVLDFQSLYPSVMIAYNYCYSTFLGRAMHWRGRDKMGFIDYKRQPRILELL 1209
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKD-PLEKAVLDGRQLA 609
+ +N P+G + K ++ +L ++L E+L R K +K KD + + +L+ RQLA
Sbjct: 1210 KDKINIAPNGMMYAKQEARQSLLAKMLSEILETRVMVKNGMKADKDDKVLQRLLNNRQLA 1269
Query: 610 LKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEV 668
LK+ AN YG+T A+ G++PC EI+ S+ GR+ +E + +V + AEV
Sbjct: 1270 LKLIANVTYGYTSASFSGRMPCSEIADSIVQTGRETLEKAIAFIH----SVERW--GAEV 1323
Query: 669 IYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAG 728
+YGDTDS+ V T + A +G E A ++ +P+KL+FEKVY+P +L++KKRY G
Sbjct: 1324 VYGDTDSLFVYLKGRTRDQAFDIGEEIAQAVTDLNPRPVKLKFEKVYHPCVLLAKKRYVG 1383
Query: 729 L-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDL 787
Y +K + D KGIETVRRD + + + L + D+ Y + + +
Sbjct: 1384 FKYEHRNQKEPEFDAKGIETVRRDGTPAEQKIEEKALKTLFRTADLSQVKSYFQRQCAKI 1443
Query: 788 LMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAA 846
+ R+ + + + T D + A V +RM + D + P G+RVPYV++ A
Sbjct: 1444 MQGRISIQDFCFAREVRLGTYSDRHLPAGAVISTKRMLE-DPRSEPQTGERVPYVVVTGA 1502
Query: 847 KGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDH 902
GA+ +R P +L + + +D YY+ I PL RIF + N + E+
Sbjct: 1503 PGARLVDRCVAPQTLLHDAQLELDAEYYITKNIIPPLERIFNLVGANVRQWYDEMPKVQR 1562
Query: 903 TRSI---SISTPSNSG-----IMKFAKRQLSCIGCKALISNGT--LCSHCKGREAELYCK 952
R + +++ P++ G ++ R SC+ C++ +S+ +C C +
Sbjct: 1563 IRRVEGSALARPNSVGGASRKTLESYMRSSSCVVCRSRLSDAAVPVCGDCLQKPHLTLLD 1622
Query: 953 TVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
VS++Q E L C+ C G S +V C S DCPIFY R + + +K L+
Sbjct: 1623 VVSRLQRAEKRVVDLEAICRSCMGVSPGDEVSCDSLDCPIFYSRARDAANWRHSKAVLE 1681
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 79/208 (37%), Gaps = 41/208 (19%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------N 171
+IRIFG T G VC VHG PY YI + P+D++ + L + A N
Sbjct: 42 VIRIFGATETGQRVCVHVHGAFPYLYIEYNGSLAPEDVNSAIRTLHLSIDHALAVSFRRN 101
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
+ FV HI +V K Y + F KI + P + +L +G +
Sbjct: 102 AYDRRTAFVAHITLV-KGVPFYGYHVGWRFFFKIYLLNPFHMTRLVDLLHQG----AVMK 156
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA--------------------- 270
+ YE++V + ++M D N+ G + K+R
Sbjct: 157 RPLQPYEAHVQYIPQWMCDYNLYGCAIMSCSQAKFRAPVPEYFELSNLAHRWHDRSILPE 216
Query: 271 --------KTLSYCQLEFDCLYSDIISR 290
+ S+C LE D DI++R
Sbjct: 217 SILDHPALQKQSHCALEVDVCVQDILNR 244
>gi|359487804|ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
Length = 2002
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 197/634 (31%), Positives = 307/634 (48%), Gaps = 57/634 (8%)
Query: 412 LQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVL 471
+G R R Y ++ A L ++++L I E+ARV G+ +LSRG V
Sbjct: 535 FSSGPGRARYRSIEYVIQRAKLNFEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYHVE 594
Query: 472 SQLLRKAKQKNL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMM 529
S LR A +N + P +Q ++ V+E +GFY P+ LDF SLYPS+++
Sbjct: 595 SMFLRLAHTQNFLAISPGPQQVATQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMII 654
Query: 530 AYNLCYSTL---VTPEDARKLNLP-----PECVNK-------TPSGETFVKSNLQKGILP 574
AYNLCYST V P A L + P ++ TP+G +V S +KG+LP
Sbjct: 655 AYNLCYSTCLGKVAPSKADVLGVSIYSPDPHALHDLKDQILLTPNGVMYVPSKARKGVLP 714
Query: 575 EILEELLAAR---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPC 630
+LEE+L+ R K+A L ++ L++ + + RQLALK+ AN YG+T A G++PC
Sbjct: 715 RLLEEILSTRIMVKKAMKKLVPSQQVLQR-IFNARQLALKLIANVTYGYTAAGYSGRMPC 773
Query: 631 IEISSSVTSYGRQMIEHTKKLV--EDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAA 688
E++ S+ GR+ +E+ LV DK+ A+VIYGDTDS+ V TV+ +
Sbjct: 774 AELADSIVQCGRRTLENAISLVNTHDKW--------KAKVIYGDTDSMFVLLKGRTVKES 825
Query: 689 MKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIET 747
++G E A ++ P+ L+ EKVY+P L++KKRY G + +P++ + D KGIET
Sbjct: 826 FQIGHEIASAVTAMNPNPVTLKMEKVYHPCFLLTKKRYVGYSYESPDQIEPTFDAKGIET 885
Query: 748 VRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL---T 804
VRRD C V + + L +DI Y++ +L R+ L V K + T
Sbjct: 886 VRRDTCGAVAKTMEQSLRLFFEHQDISKVKVYLQRQWRRILSGRVSLQDFVFAKEVRLGT 945
Query: 805 KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN 864
+ + A + + MR D P +RVPYV+I GA+ + DP+ +L
Sbjct: 946 YSSRASSLPPAAIVAIKAMRA-DPRAEPCYAERVPYVVIHGEPGARLVDLVVDPLDLLAI 1004
Query: 865 NIP--IDTHYYLENQISKPLLRIFEPI----------LKNASKELLSGDHTRSISISTPS 912
+ P ++ YY+ QI L R+F + + +E+ + + + P
Sbjct: 1005 DSPYRLNDQYYINKQIIPALQRVFGLVGADLYQWFSEMPRPVREVYAKHKSHA---PNPY 1061
Query: 913 NSGIMKFAKRQLSCIGCKALI-SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQC 971
+ I F CI C L ++ +C C + + + +LE L C
Sbjct: 1062 RTRI-DFYYLSKHCILCGELSPASAHICDKCSKDGTAVAAAVIGRTAKLERDIQHLAAIC 1120
Query: 972 QECQGS---LHQDVLCTSRDCPIFYRRKKAQKDM 1002
+ C G + V CTS C +FY R+K QKD+
Sbjct: 1121 RHCGGGDWIVESGVKCTSLACSVFYERRKVQKDL 1154
>gi|9633109|ref|NP_050219.1| DNA polymerase [Human herpesvirus 6B]
gi|82063853|sp|Q9QJ32.1|DPOL_HHV6Z RecName: Full=DNA polymerase catalytic subunit
gi|11261521|pir||T44185 probable DNA-directed DNA polymerase (EC 2.7.7.7) U38 [similarity]
- human herpesvirus 6 (strain Z29)
gi|5733549|gb|AAD49652.1|AF157706_49 U38 [Human herpesvirus 6B]
Length = 1012
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 184/538 (34%), Positives = 279/538 (51%), Gaps = 56/538 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
EKE + + I R + YCL+D+ L RL ++ + + E+AR+ V
Sbjct: 452 EKEQLSYKEIPKKFISGPSGRAVVGKYCLQDSVLVVRLFKQINYHYEVAEVARLAHVTAR 511
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT-YEGATVLEARAGFYEKPIATL 518
++ GQ K+ +L +AK++N+++P++ + + QG Y+GATVLE + G+Y P
Sbjct: 512 CVVFEGQQKKIFPCILTEAKRRNMILPSMVSSHNRQGIGYKGATVLEPKTGYYAVPTVVF 571
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPE----CVNKTPSGETFVKSNLQKGILP 574
DF SLYPSIMMA+NLCYSTLV D R++ E V FVK +++ +L
Sbjct: 572 DFQSLYPSIMMAHNLCYSTLVL--DERQIAGLSESDILTVKLGDETHRFVKPCVRESVLG 629
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
+L++ LA R+ KA+++ DP+ K +LD +QLALK + NSVYG TGA G LPC+ I+
Sbjct: 630 SLLKDWLAKRREVKAEMQNCSDPMMKLLLDKKQLALKTTCNSVYGVTGAAHGLLPCVAIA 689
Query: 635 SSVTSYGRQMIEHTKKLVEDKFTTVGGY-------------EHNAEVIYGDTDSVMVQFG 681
+SVT GR+M+ T V K + + + EVIYGDTDS+ +
Sbjct: 690 ASVTCLGREMLCSTVDYVNSKMQSEQFFCEELGLTASDFTGDLKVEVIYGDTDSIFMSVR 749
Query: 682 VPTVEAAMKLGREAADYISGTFIK-PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM 740
E+ ++ A +I+ K PIKLEFEK+ P +LI KKRY G + F
Sbjct: 750 NMANESLRRIAPMIAKHITDRLFKSPIKLEFEKILCPLILICKKRYIGRQDDSLLIF--- 806
Query: 741 DTKGIETVRRDNCLLVKNLVTECLHKILVDRDI-PGAVQYVKSTIS-------------- 785
KG++ VR+ +C VK +V + + + D ++ AV++ T +
Sbjct: 807 --KGVDLVRKTSCDFVKGVVKDIVDLLFFDEEVQTAAVEFSHMTQTQLREQGVPVGIHKI 864
Query: 786 ---------DLLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPNVG 835
+L NR D+ L+++ L+K Y + AH+ + R+ +R PNVG
Sbjct: 865 LRRLCKAREELFQNRADVRHLMLSSVLSKEVAAYKQPNLAHLSVIRRLAQRKEEI-PNVG 923
Query: 836 DRVPYVIIKAAKGAKA---YERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL 890
DR+ YV+I + G K YE +EDP YVLE+ IPI Y + QI K + PI
Sbjct: 924 DRIMYVLIAPSTGNKQTHNYELAEDPNYVLEHKIPIHAEKYFD-QIIKAVTNAISPIF 980
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 144/306 (47%), Gaps = 30/306 (9%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
S +IR+FG + +G +C V G E YFY C G + + +L G ++ +
Sbjct: 113 SGTVIRMFGRSEDGEKICVNVFGQEQYFYCECVDGKSLKATIN-NLMLTGEVKMS----- 166
Query: 176 VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
FV IE K S+ Y K V+ S R + + +Q +G F+
Sbjct: 167 -CSFV--IEPADKLSLYGYNANTVVNLFK--VSFGNFYVSQR--IGKILQNEG-----FV 214
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGE 295
YE +V RF +D + W V + K S ++E +C SD++S E
Sbjct: 215 VYEIDVDVLTRFFVDNGFLSFGWYNVKKYIPQDMGKG-SNLEVEINCHVSDLVSL----E 269
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLVTLQGEKQPFIRNVMTLKSCA 353
+ SFDIEC G+ G+FP+ + D VIQ++ +V+ E R++ TL +C
Sbjct: 270 NVNWPLYGCWSFDIECLGQNGNFPDAENLGDIVIQIS-VVSFDTEGDRDERHLFTLGTCE 328
Query: 354 PIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL-IEKEDVHHSII--- 409
I GV + F +E ++LL + F+R P+ + GYNI FDL YL I + ++H I
Sbjct: 329 QIDGVHIYEFASEFELLLGFFIFLRIESPEFITGYNINNFDLKYLCIRMDKIYHYEIGCF 388
Query: 410 SDLQNG 415
S L+NG
Sbjct: 389 SKLKNG 394
>gi|6552720|gb|AAF16522.1|AF191043_1 DNA-dependent DNA polymerase [porcine lymphotropic herpesvirus 2]
gi|27452850|gb|AAO12354.1| DNA polymerase [Porcine lymphotropic herpesvirus 2]
Length = 1001
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 182/539 (33%), Positives = 280/539 (51%), Gaps = 54/539 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KED+ + I L GNA R RL +YC++D+ L LL M E+A++ +P+
Sbjct: 455 KKEDMSYKEIPALFKGNANDRARLGLYCIQDSILVMDLLKFFMTHIEISEIAKIANIPMR 514
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+++ GQ I+V S LL AK + ++P + Q G+ QG Y+GATV+ +GFY P+ +D
Sbjct: 515 RVITDGQQIRVFSCLLASAKNRGYILP-MPQNGNFQG-YQGATVIAPLSGFYNTPVLVVD 572
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKT---PSGET-FVKSNLQKGILPE 575
FASLYPSI+ A+NLCYSTL+ ED K E +T SG FVK ++ + +L
Sbjct: 573 FASLYPSIIQAHNLCYSTLIHNEDLHKYPQLKEDDYETFLISSGPVHFVKKHISESLLSN 632
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L LA RK + +L DP + +LD +QLA+K++ N+VYGFTG G LPC++I+
Sbjct: 633 LLTTWLAKRKMIRKELTACADPKLRTILDKQQLAIKVTCNAVYGFTGVASGMLPCLKIAE 692
Query: 636 SVTSYGRQMIEHTKKLVED-------KFTTVGG-------YEHNAEVIYGDTDSVMVQFG 681
++T GR M+E TK VE+ VG ++ +VIYGDTDS+ +
Sbjct: 693 TITMQGRAMLEKTKVFVENLSHEDLRSICKVGSIPQSSNVFDKPFKVIYGDTDSLFINCP 752
Query: 682 VPTVEAAMKLGREAADYISG-TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM 740
++ + G E A YI+ F+ PIKLE EKV+ LL++KKRY G + K+
Sbjct: 753 KYNIDQIVLFGDELAQYITERLFVSPIKLESEKVFGCLLLLTKKRYIGTLSSG-----KI 807
Query: 741 DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------ 776
KG++ VR+ C V+ LH +L D + A
Sbjct: 808 LMKGVDLVRKTACTYVQETCRAVLHLVLNDNTVKEAANLLSKRKISKCFEEGLPEGFIKI 867
Query: 777 VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVG 835
+ + + DL NR+ + LV + L K Y+ H+ + +++ R+ P V
Sbjct: 868 IDILNAAYKDLSANRVPIQTLVYSTELNKDFSCYKSYNLPHLAVYKKIILRNEE-PPQVH 926
Query: 836 DRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNAS 894
DR+ YV I KG+ + +EDP +V N IPI + Y + +I + I + + +N +
Sbjct: 927 DRISYVFIN-GKGSLISDMAEDPAFVEANRIPIASDLYFD-KIVHGVANILQCLFENNT 983
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 171/379 (45%), Gaps = 44/379 (11%)
Query: 56 SLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR-------- 107
+ + D+E + ++ + W + P+ + + F DI + D +R
Sbjct: 51 TYFMGDLEYKVFPTTKTSMWNQTPIPANTECLSGELCFHVYDIIETVYDKDRCDEVPFYL 110
Query: 108 --ELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEG 165
+++P ++++FG T + SVC V G YFY D + H I++
Sbjct: 111 QTDIIP----CGIVLKLFGRTSDDRSVCVNVFGQNVYFY-----AYSEADSYNIHHIVQQ 161
Query: 166 RMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQ 225
M E + V+ KR + KI ++ M+A IL ++
Sbjct: 162 TMYENSSRQCNFNVVK-----TKRKFLDTFDTAEHEVYKITLSSYHMMA----ILSNKLR 212
Query: 226 LDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYS 285
G ++ +E+NV RF+ D + W R SY LEFDC S
Sbjct: 213 QCG-----YLIFEANVDAVSRFITDNDFCTFAWYSCKSAMPRLGQFRDSYTSLEFDCKVS 267
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLVTLQGEKQPFI 343
D+ + H + + ++I++FDIEC G +G FP D +IQ++ ++ G+ +
Sbjct: 268 DL-NVHRDKNY--WPHYKIMAFDIECLGEQG-FPNAARDGDMIIQISCIIWTLGQDDNYD 323
Query: 344 RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
+ +++L +C+PI + SF +E D+L A+ IR+ D +++ GYNI FD PY++E+ +
Sbjct: 324 KILLSLGTCSPITNTTIYSFPSELDMLYAFCTMIRDYDVEIITGYNIANFDFPYILERAN 383
Query: 404 VHHSIISDLQNGNAETRRR 422
++I N +A TR +
Sbjct: 384 TVYNI-----NPDAYTRTK 397
>gi|4996026|dbj|BAA78259.1| DNA polymerase [Human herpesvirus 6B]
Length = 1012
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 278/536 (51%), Gaps = 52/536 (9%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
EKE + + I R + YCL+D+ L RL ++ + + E+AR+ V
Sbjct: 452 EKEQLSYKEIPKKFISGPSGRAVVGKYCLQDSVLVVRLFKQINYHYEVAEVARLAHVTAR 511
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT-YEGATVLEARAGFYEKPIATL 518
++ GQ K+ +L +AK++N+++P++ + + QG Y+GATVLE + G+Y P
Sbjct: 512 CVVFEGQQKKIFPCILTEAKRRNMILPSMVSSHNRQGIGYKGATVLEPKTGYYAVPTVVF 571
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEI 576
DF SLYPSIMMA+NLCYSTLV E + + ET FVK +++ +L +
Sbjct: 572 DFQSLYPSIMMAHNLCYSTLVLDERQIAGLSESDILTVKLGDETHRFVKPCVRESVLGSL 631
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
L++ LA R+ KA+++ DP+ K +LD +QLALK + NSVYG TGA G LPC+ I++S
Sbjct: 632 LKDWLAKRREVKAEMQNCSDPMMKLLLDKKQLALKTTCNSVYGVTGAAHGLLPCVAIAAS 691
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGY-------------EHNAEVIYGDTDSVMVQFGVP 683
VT GR+M+ T V K + + + EVIYGDTDS+ +
Sbjct: 692 VTCLGREMLCSTVDYVNSKMQSEQFFCEELGLTASDFTGDLKVEVIYGDTDSIFMSVRNM 751
Query: 684 TVEAAMKLGREAADYISGTFIK-PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDT 742
E+ ++ A +I+ K PIKLEFEK+ P +LI KKRY G + F
Sbjct: 752 ANESLRRIAPMIAKHITDRLFKSPIKLEFEKILCPLILICKKRYIGRQDDSLLIF----- 806
Query: 743 KGIETVRRDNCLLVKNLVTECLHKILVDRDI-PGAVQYVKSTIS---------------- 785
KG++ VR+ +C VK +V + + + D ++ AV++ T +
Sbjct: 807 KGVDLVRKTSCDFVKGVVKDIVDLLFFDEEVQTAAVEFSHMTQTQLRDEGVPVGIHKILR 866
Query: 786 -------DLLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPNVGDR 837
+L NR D+ L+++ L+K Y + AH+ + R+ +R PNVGDR
Sbjct: 867 RLCKAREELFQNRADVRHLMLSSVLSKEVAAYKQPNLAHLSVIRRLAQRKEEI-PNVGDR 925
Query: 838 VPYVIIKAAKGAKA---YERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL 890
+ YV+I + G K YE +EDP YVLE+ IPI Y + QI K + PI
Sbjct: 926 IMYVLIAPSTGNKQTHNYELAEDPNYVLEHKIPIHAEKYFD-QIIKAVTNAISPIF 980
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 144/306 (47%), Gaps = 30/306 (9%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
S +IR+FG + +G +C V G E YFY C G + + +L G ++ +
Sbjct: 113 SGTVIRMFGRSEDGEKICVNVFGQEQYFYCECVDGKSLKATIN-NLMLTGEVKMS----- 166
Query: 176 VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
FV IE K S+ Y K V+ S R + + +Q +G F+
Sbjct: 167 -CSFV--IEPADKLSLYGYNANTVVNLFK--VSFGNFYVSQR--IGKILQNEG-----FV 214
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGE 295
YE +V RF +D + W V + K S ++E +C SD++S E
Sbjct: 215 VYEIDVDVLTRFFVDNGFLSFGWYNVKKYIPQDMGKG-SNLEVEINCHVSDLVSL----E 269
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLVTLQGEKQPFIRNVMTLKSCA 353
+ SFDIEC G+ G+FP+ + D VIQ++ +V+ E R++ TL +C
Sbjct: 270 NVNWPLYGCWSFDIECLGQNGNFPDAENLGDIVIQIS-VVSFDTEGDRDERHLFTLGTCE 328
Query: 354 PIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL-IEKEDVHHSII--- 409
I GV + F +E ++LL + F+R P+ + GYNI FDL YL I + ++H I
Sbjct: 329 QIDGVHIYEFASEFELLLGFFIFLRIESPEFITGYNINNFDLKYLCIRMDKIYHYEIGCF 388
Query: 410 SDLQNG 415
S L+NG
Sbjct: 389 SKLKNG 394
>gi|406608056|emb|CCH40490.1| DNA polymerase zeta subunit [Wickerhamomyces ciferrii]
Length = 1409
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 188/610 (30%), Positives = 309/610 (50%), Gaps = 55/610 (9%)
Query: 423 LAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN 482
L+ + K + RL+D I E AR+ G+ + + RG KV S ++R AK +N
Sbjct: 820 LSSHYFKKLEIDGRLIDTQELITRAAEEARLIGIDFNDVYYRGSQYKVESFMVRMAKAEN 879
Query: 483 LVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT 540
++ P+ +Q ++ V+E + +Y+ P+ LDF SLYPSI++AYN CYSTL+
Sbjct: 880 FMLFSPSKRQVRKQKPLECIPLVMEPISAYYKSPLIVLDFQSLYPSIVIAYNYCYSTLLG 939
Query: 541 --------PED--ARKLNLPP-------ECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
P + PP +N +P+G F KS+++K +L ++LEE+L
Sbjct: 940 RLRNYSNGPNHIGTSHVKHPPGLLKLLENDINISPNGLMFAKSSVRKSLLAKMLEEILDT 999
Query: 584 RKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGR 642
R K+ +K + + K + + RQLALK+ AN YG+T A+ G++PC +I+ ++ GR
Sbjct: 1000 RFMVKSTMKFLDENM-KQLYNSRQLALKLIANVTYGYTSASFSGRMPCSDIADAIVQTGR 1058
Query: 643 QMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT 702
+ ++ ++E G A+V+YGDTDS+ V + + A ++G+E AD ++ +
Sbjct: 1059 ETLDKAVDIIE------GQSSWGAKVVYGDTDSLFVYLPGRSRDDAFRIGKEMADAVTKS 1112
Query: 703 FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTE 762
P+ L+FEKVY+P +L++KKRY G + N K D KGIETVRRD +++V +
Sbjct: 1113 NPDPVTLKFEKVYHPCVLMAKKRYVGYSYENINSPVKFDAKGIETVRRDGHPAQQHIVEK 1172
Query: 763 CLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAER 822
CL + DI +V+ + + N++ + K + K G Y+ ++ +
Sbjct: 1173 CLRILFETNDISQIKNFVQDQFNKITYNKVSIQDFCFAKEV-KIG-TYKQPPPGAVVSTK 1230
Query: 823 MRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPL 882
+ ++D+ P +RVPYVII+ G+ ER+ P +ENN +D YY+ + PL
Sbjct: 1231 LMEQDSRAEPQYKERVPYVIIQET-GSILRERARTPEQFIENNYKLDAEYYIVKTLIPPL 1289
Query: 883 LRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKR----QLSCIGCKALISNGTL 938
RIF LL D P + + + AKR C+ C + + L
Sbjct: 1290 ERIF---------NLLGVD-------VKPWYNELPRPAKRSSIYNSICLSCN-VPTKSNL 1332
Query: 939 CSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKA 998
C C+ E + +++++E L T C+ C G V C S DCP++Y R K
Sbjct: 1333 CQSCRNDELKTVLNLNQRMKQIEGRMKDLMTVCRSCSG---HSVSCESHDCPVYYTRVKE 1389
Query: 999 QKDMAEAKLQ 1008
K + EA +Q
Sbjct: 1390 GKKL-EAAVQ 1398
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 79/216 (36%), Gaps = 46/216 (21%)
Query: 112 LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEG------ 165
S ++R+FG GH++ +HG PY YI D Q+LE
Sbjct: 51 FSFHHVPVVRVFGSIPTGHNIIAHIHGAYPYIYIPYDN----QDCFRLQQVLEAAIASSL 106
Query: 166 -RMREANRN-------SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCR 217
R + N N SKV +++ HI + K Y + F KI + P+
Sbjct: 107 NRKKSDNENTNDNHKESKVFKYIAHISLC-KGVPFYGYNVGYKAFYKIYLLNPSYSNRLA 165
Query: 218 GILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNW------------------- 258
+L G G K + YE ++ + L+F+ D N+ G W
Sbjct: 166 EMLRDG---KATG-KKYDCYEVHIPYVLQFLSDFNLFGCAWLRLKNLYLRSPILSDDSLK 221
Query: 259 ----IEVPVGKYRKTAKTLSYCQLEFDCLYSDIISR 290
+E G A+ Y LE D DI++R
Sbjct: 222 TDELVEYLTGFQPTDAERTGYSALEIDVCAQDILNR 257
>gi|19114980|ref|NP_594068.1| DNA polymerase zeta catalytic subunit Rev3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74625273|sp|Q9P6L6.1|DPOZ_SCHPO RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3
gi|7768485|emb|CAB90776.1| DNA polymerase zeta catalytic subunit Rev3 (predicted)
[Schizosaccharomyces pombe]
Length = 1480
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 197/678 (29%), Positives = 315/678 (46%), Gaps = 63/678 (9%)
Query: 367 RDVLLAWRDFIREVDPDVMIGY-------NICKFDLPYLIEKEDVHHSIISDLQNGNAET 419
R VL WR EV+ ++ Y NI K PY + + VH Q+
Sbjct: 802 RHVLNIWRILRGEVN---LLNYSLENVVLNIFKKQTPYYNQADKVHL-----WQSSRFHE 853
Query: 420 RRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAK 479
++ L Y L +L + E AR+ G+ ++SRG KV S + R AK
Sbjct: 854 KQILLNYMLNRTRYCLEILSACAIVTKIREQARIIGIDFMSVISRGSQFKVESIMFRIAK 913
Query: 480 QKNLVIPN--VKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST 537
+N + P+ KQ + V+E ++ Y P+ LDF SLYPSI++AYNLCYST
Sbjct: 914 PENYIFPSPSAKQVAEQNALEALPLVMEPKSDLYNNPVVVLDFQSLYPSIIIAYNLCYST 973
Query: 538 LVTP----------------EDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELL 581
+ P + +NL V +P+G +VK N++K +L ++LEEL+
Sbjct: 974 CLGPVKIVNGKVKLGFMFHSSNPNIVNLIKNDVYISPNGYAYVKENVRKSLLAKMLEELI 1033
Query: 582 AARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K +K+ VL+ RQLALK+ AN YG+T A+ G++PC EI+ ++
Sbjct: 1034 ETRNMVKRGMKDCDSDYVNKVLNSRQLALKLIANVTYGYTSASFSGRMPCSEIADTIVET 1093
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
GR+++ ++ + + + H A+V+YGDTDS+ V+ T E A +G++ A+ I+
Sbjct: 1094 GREILSYSLE-----YINTLDFCH-AKVVYGDTDSLFVELPGATKEQAFDIGQQLANNIT 1147
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKNL 759
F PI+L+FEK+Y+P L++KKRY G + + +K + KGIETVRRD + + L
Sbjct: 1148 SRFPSPIRLKFEKIYFPCFLLAKKRYVGFKFESVSQKAPIFEAKGIETVRRDGTPVQQQL 1207
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL-TKTGDDYEVKAAHVE 818
+ CL + +D+ + ++ ++ + + +K + + +
Sbjct: 1208 LRRCLEILFKTKDLSTVKKEFQNVCYQIMSGNVPVMDFCFSKEVRLEKYKELSTAPPGAV 1267
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP-IDTHYYLENQ 877
+A R+ +D P G+RVPY+II AA G RS P L ++ +D +YY+ N
Sbjct: 1268 MARRLMTKDPRREPQYGERVPYLIIAAAPGTTLANRSVAPEEFLSSSFSQLDINYYINNS 1327
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTR-SISISTPSNSGIMK-----FAKRQLSCIGCKA 931
+ PL R + +A R S+ ++ GI K F +L C +
Sbjct: 1328 LIPPLDRFLNLLGASAQSWYHEMPKPRTSLKLTETVKGGIQKKTLDTFLMEKL----CSS 1383
Query: 932 LISN---------GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD- 981
+ N +LCS C K V+Q L+ C+ C D
Sbjct: 1384 CLKNNIEIIPDKINSLCSDCLKNPCATISKAVTQHNAYNKKLSLLFDICRGCSKLSSSDP 1443
Query: 982 VLCTSRDCPIFYRRKKAQ 999
VLC S C ++Y R K +
Sbjct: 1444 VLCKSNSCKVYYDRAKTE 1461
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 18/174 (10%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYI---SCPQGMG---PDDISHFHQILEGRM-- 167
+ +IR+FG+ E +VCC +H PY Y+ S + + PD +S + +
Sbjct: 35 TVPVIRVFGLNEEAETVCCFIHNVFPYIYVEYSSFAETLDLEVPDFLSQLQTSINYALAL 94
Query: 168 -REANRNSKVPQFVRHIEMVQKRSIMYYQQQKS-QPFLKIVVALPTMVASCRGILDRGIQ 225
AN + P V+ +++V + I +Y Q FLKI + P + +G
Sbjct: 95 AARANPETYKPA-VQSVQLV--KGIPFYGYSFCFQKFLKICLFSPKNRDRLVDLFRQGAI 151
Query: 226 LDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLE 279
L+ K YES++ + L+FM+D N+ G I++ K LS+C +E
Sbjct: 152 LN----KVIQVYESHLPYLLQFMVDHNLYGCAPIDLD-DSIIKRDDLLSFCNVE 200
>gi|27452775|gb|AAO12282.1| DNA polymerase [Porcine lymphotropic herpesvirus 2]
Length = 1001
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 182/539 (33%), Positives = 280/539 (51%), Gaps = 54/539 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KED+ + I L GNA R RL +YC++D+ L LL M E+A++ +P+
Sbjct: 455 KKEDMSYKEIPALFKGNANDRARLGLYCIQDSILVMDLLKFFMTHIEISEIAKIANIPMR 514
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+++ GQ I+V S LL AK + ++P + Q G+ QG Y+GATV+ +GFY P+ +D
Sbjct: 515 RVITDGQQIRVFSCLLASAKNRGYILP-MPQNGNFQG-YQGATVIAPLSGFYNTPVLVVD 572
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKT---PSGET-FVKSNLQKGILPE 575
FASLYPSI+ A+NLCYSTL+ ED K E +T SG FVK ++ + +L
Sbjct: 573 FASLYPSIIQAHNLCYSTLIHNEDLHKYPQLKEDDYETFLISSGPVHFVKKHISESLLSN 632
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L LA RK + +L DP + +LD +QLA+K++ N+VYGFTG G LPC++I+
Sbjct: 633 LLTTWLAKRKMIRKELTACADPKLRTILDKQQLAIKVTCNAVYGFTGVASGMLPCLKIAE 692
Query: 636 SVTSYGRQMIEHTKKLVED-------KFTTVGG-------YEHNAEVIYGDTDSVMVQFG 681
++T GR M+E TK VE+ VG ++ +VIYGDTDS+ +
Sbjct: 693 TITMQGRAMLEKTKVFVENLSHEDLRSICKVGSIPQSSNVFDKPFKVIYGDTDSLFINCP 752
Query: 682 VPTVEAAMKLGREAADYISG-TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM 740
++ + G E A YI+ F+ PIKLE EKV+ LL++KKRY G + K+
Sbjct: 753 KYNIDQIVLFGDELAQYITERLFVSPIKLESEKVFGCLLLLTKKRYIGTLSSG-----KI 807
Query: 741 DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------ 776
KG++ VR+ C V+ LH +L D + A
Sbjct: 808 LMKGVDLVRKTACTYVQETCRAVLHLVLNDNTVKEAANLLSKRKISKCFEEGLPEGFIKI 867
Query: 777 VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVG 835
+ + + DL NR+ + LV + L K Y+ H+ + +++ R+ P V
Sbjct: 868 IDILNAAYKDLSANRVPIQTLVYSTELNKDFSCYKSYNLPHLAVYKKIILRNEE-PPQVH 926
Query: 836 DRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNAS 894
DR+ YV I KG+ + +EDP +V N IPI + Y + +I + I + + +N +
Sbjct: 927 DRISYVFIN-GKGSLISDMAEDPAFVEANRIPIASDLYFD-KIVHGVANILQCLFENNT 983
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 171/379 (45%), Gaps = 44/379 (11%)
Query: 56 SLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDIDYVIGDSNR-------- 107
+ + D+E + ++ + W + P+ + + F DI + D +R
Sbjct: 51 TYFMGDLEYKVFPTTKTSMWNQTPIPANTECLSGELCFHVYDIIETVYDKDRCDEVPFYL 110
Query: 108 --ELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEG 165
+++P ++++FG T + SVC V G YFY D + H I++
Sbjct: 111 QTDIIP----CGIVLKLFGRTSDDRSVCVNVFGQNVYFY-----AYSEADSYNIHHIVQQ 161
Query: 166 RMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQ 225
M E + V+ KR + KI ++ M+A IL ++
Sbjct: 162 TMYENSSRQSNFNVVK-----TKRKFLDTFDTAEHEVYKITLSSYHMMA----ILSNKLR 212
Query: 226 LDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYS 285
G ++ +E+NV RF+ D + W R SY LEFDC S
Sbjct: 213 QCG-----YLIFEANVDAVSRFITDNDFCTFAWYSCKSAMPRLGQFRDSYTSLEFDCKVS 267
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLVTLQGEKQPFI 343
D+ + H + + ++I++FDIEC G +G FP D +IQ++ ++ G+ +
Sbjct: 268 DL-NVHRDKNY--WPHYKIMAFDIECLGEQG-FPNAARDGDMIIQISCIIWTLGQDDNYD 323
Query: 344 RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
+ +++L +C+PI + SF +E D+L A+ IR+ D +++ GYNI FD PY++E+ +
Sbjct: 324 KILLSLGTCSPITNTTIYSFPSELDMLYAFCTMIRDYDVEIITGYNIANFDFPYILERAN 383
Query: 404 VHHSIISDLQNGNAETRRR 422
++I N +A TR +
Sbjct: 384 TVYNI-----NPDAYTRTK 397
>gi|326529379|dbj|BAK01083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1715
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 201/647 (31%), Positives = 313/647 (48%), Gaps = 70/647 (10%)
Query: 414 NGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQ 473
G R R Y A L ++++L + E+ARV G+ +LSRG +V S
Sbjct: 1060 TGPGRGRHRCIEYVSSRAMLNLEIINQLDLVNRTSELARVFGIDFFSVLSRGSQFRVESM 1119
Query: 474 LLRKAKQKNL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAY 531
LLR A +N + P +Q S+ V+E + FY P+ LDF SLYPS+++AY
Sbjct: 1120 LLRLAHTQNYLAISPGNQQVASQPAMECMPLVMEPESAFYSDPVLVLDFQSLYPSMIIAY 1179
Query: 532 NLCYSTL---VTPEDARKLNLP-----PECVNK-------TPSGETFVKSNLQKGILPEI 576
NLCYST V P + L + P + TP+G +V+ ++KG++P +
Sbjct: 1180 NLCYSTCLGKVFPSKSSVLGVSSYSADPHTIADLKNQLLLTPNGVLYVQPEVRKGVVPRL 1239
Query: 577 LEELLAAR---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIE 632
LEE+L+ R K+A L ++ L+K +L+ RQLALK+ AN YG+T A G++PC E
Sbjct: 1240 LEEILSTRIMVKQAMKKLAPSQKVLQK-ILNARQLALKLIANVTYGYTAAGFSGRMPCAE 1298
Query: 633 ISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEH---NAEVIYGDTDSVMVQFGVPTVEAAM 689
++ S+ GR+ +E V +H NA V+YGDTDS+ V + E A
Sbjct: 1299 LADSIVQCGRRTLETAISFVN---------QHPLWNARVVYGDTDSMFVLLKGRSREEAF 1349
Query: 690 KLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETV 748
++G+E A ++ P+ L+FEKVY+P L++KKRY G + NPE+ + + D KGIETV
Sbjct: 1350 RIGKEIASLVTAINPDPVTLKFEKVYHPCFLLTKKRYVGYSYENPEQNEPIFDAKGIETV 1409
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRD C V ++ L + ++D+ YV+ +L ++ + V K + + G
Sbjct: 1410 RRDTCPAVAKMLERSLRIMFEEQDLVKVKSYVERQWIRILSGKISIQDFVFAKEV-RLG- 1467
Query: 809 DYEVKAAHVE----LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN 864
Y +A+ + +A + D P +RVPYV+I GA+ + DP +L+
Sbjct: 1468 TYSARASSLPPAAIVATKAMLSDPRAEPRYAERVPYVVIHGEPGARLVDMVIDPYGLLQV 1527
Query: 865 NIP--IDTHYYLENQISKPLLRIFEPILKN----------------ASKELLSGDHTR-S 905
P ++ YY+ QI L R+F + N A ++ G +R S
Sbjct: 1528 GSPYRLNELYYITKQIIPALQRVFGLLGVNLNKWFNEMPRPTRSTLAKRQSAFGHGSRDS 1587
Query: 906 ISISTPSN----SGIMKFAKRQLS--CIGCKALISNG-TLCSHCKGREAELYCKTVSQVQ 958
SI N + + + +S C C + T CS+C EA + +
Sbjct: 1588 SSIRLGWNKKPSAKVARIDTYYMSSHCTICGDTVQGSETFCSYCLKNEAVVATVVAGRTS 1647
Query: 959 ELEVLFGRLWTQCQECQGS---LHQDVLCTSRDCPIFYRRKKAQKDM 1002
+LE L C C G+ + V C S CP+FY R+K QK++
Sbjct: 1648 KLEREIQHLAAICGHCGGADWIVESGVKCVSLACPVFYERRKIQKEL 1694
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN--SKV 176
+IRI+G T G C VH PY Y+ CP+ + +I + + G + + + ++
Sbjct: 53 VIRIYGSTPAGQKTCLHVHQALPYLYVPCPEEL-LHNIERGNSCMTGLLSDLEKTLQNRG 111
Query: 177 PQFVRHIE---MVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
P RH+ +V+ + + Y + + F+KI + P V+ L G LD +
Sbjct: 112 PAKRRHVHGCSLVRAKKLYGYHSSE-EIFVKIYLYYPHEVSRAATHLLGGAVLD----RV 166
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F YES++ + L F+ID N+ G + V K+R
Sbjct: 167 FQPYESHIPYLLHFLIDYNLYGMGHVHVTDFKFR 200
>gi|408392217|gb|EKJ71575.1| hypothetical protein FPSE_08214 [Fusarium pseudograminearum CS3096]
Length = 1696
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 202/668 (30%), Positives = 320/668 (47%), Gaps = 49/668 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y + +L+ K H+S + S ++G
Sbjct: 1013 TGRHMVNVWRAMRGELN---LLQYTMENVAW-HLLHKRIPHYSWKSLTSWYKSGKHRELN 1068
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R+ Y A L +LD I E AR+ GV + SRG KV S + R AK +
Sbjct: 1069 RMLRYYQNRAKLDIEILDANELIARTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1128
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ KQ G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1129 NFLLVSPSRKQVGGQNALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFL 1188
Query: 540 T-------------PEDARK---LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
E R+ L L + +N P+G + K+ ++K +L ++L E+L
Sbjct: 1189 GRVTNWRGTSKMGFTEYKRQQGLLTLLKDYINIAPNGMMYAKTEIRKSLLAKMLTEILET 1248
Query: 584 RKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1249 RVMVKSGMKQDKDDKTLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTG 1308
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + +V + AEV+YGDTDS+ + T + A +G E + I+
Sbjct: 1309 RETLERAIAYIH----SVEKW--GAEVVYGDTDSLFISLKGRTKDEAFDIGNEISKAITE 1362
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLV 760
+PIKL+FEKVY+P +L++KKRY G Y T + + D KGIETVRRD + +
Sbjct: 1363 MNPQPIKLKFEKVYHPCVLLAKKRYVGYKYETKDQVKPEFDAKGIETVRRDGTPAEQMIE 1422
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + D+ +Y + ++ N + + K + T D A +
Sbjct: 1423 EKALRLLFETADLSQVKEYFQKQCQKIMRNNVSVQDFCFAKEVRLGTYSDKGAPPAGALI 1482
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
+ + +DA P G+RVPYV+I A GA+ +R P +L+N + +D YY+ +
Sbjct: 1483 STKRMLQDARAEPQYGERVPYVVITGAPGARLIDRCVAPEELLDNPHWQLDAEYYISKNL 1542
Query: 879 SKPLLRIFEPILKNASK------ELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL 932
PL RIF + N + ++ H ++S + MK C+ C
Sbjct: 1543 IPPLERIFNLVGANVRQWYDEMPKVQRVHHATTLSNKKTTLESYMK----STHCLVCNIK 1598
Query: 933 ISN--GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDC 989
S LC C+ +++ E + + C+ C G +DV C S+DC
Sbjct: 1599 FSQEGNPLCPACRANIPAALLSLQTRLTNEERRLQEILSLCRSCSGVGPVEDVQCDSKDC 1658
Query: 990 PIFYRRKK 997
P+F+ R K
Sbjct: 1659 PVFWTRMK 1666
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 47/212 (22%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS----HFHQILEG------RMR 168
I+RIFG T G VC +HG PY Y+ G+ PD++ FH ++ R
Sbjct: 42 IVRIFGATETGQKVCAHIHGAFPYLYVEYEGGLSPDEVGAYIYRFHLSIDHALAVSYRRD 101
Query: 169 EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDG 228
+ N N++ FV I +V+ + + FLKI + P ++ +L +G+ +
Sbjct: 102 QKNDNAR---FVARITLVKGIPFFGF-HVGYRFFLKIYMFNPVVMTRLADLLQQGVIMK- 156
Query: 229 LGMKSFMTYESNVLFALRFMIDCNIVGGNWIE-------VPVGKY--------------- 266
F YE+++ F L+FM D N+ G +++E PV +Y
Sbjct: 157 ---HKFQPYEAHLQFLLQFMTDFNLYGCDYLESSSTGFRSPVPEYGEETNSSHLWHSESI 213
Query: 267 -------RKTAKTLSYCQLEFDCLYSDIISRH 291
T S+C LE D DI++RH
Sbjct: 214 PQEDVTDETTLPRSSHCSLEVDICVQDILNRH 245
>gi|357511975|ref|XP_003626276.1| DNA polymerase [Medicago truncatula]
gi|355501291|gb|AES82494.1| DNA polymerase [Medicago truncatula]
Length = 1037
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 202/680 (29%), Positives = 317/680 (46%), Gaps = 90/680 (13%)
Query: 405 HHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSR 464
H+ + G + R + Y + A L +L++L + E+ARV G+ +LSR
Sbjct: 351 HNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTSELARVFGIDFFSVLSR 410
Query: 465 GQSIKVLSQLLRKAKQKNLVI--PNVKQAGSEQG----------------TYEGAT---- 502
G +V S LR A +N V P +Q S+ +Y+ A+
Sbjct: 411 GSQYRVESMFLRLAHTQNYVAISPGNQQVLSKFSHPPLLLSVENYNVCYPSYQVASQPAM 470
Query: 503 -----VLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---VTPEDARKLNLPP--- 551
V+E +GFY P+ LDF SLYPS+++AYNLC+ T V P L + P
Sbjct: 471 ECLPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVVPSKTNTLGVSPFVP 530
Query: 552 ---------ECVNKTPSGETFVKSNLQKGILPEILEELLAAR---KRAKADLKEAKDPLE 599
+ + TP+G FV S +++G+LP +LEE+L+ R K+A L ++ L+
Sbjct: 531 EQHILQDLKDQILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVLQ 590
Query: 600 KAVL--------------DGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQM 644
+ +L + RQLALK+ +N YG+T A G++PC E++ S+ GR
Sbjct: 591 RVLLLFMDSIASAMFSIFNARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRCT 650
Query: 645 IEHTKKLV--EDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT 702
+E V +K+ NA+VIYGDTDS+ V T + A ++G E A I+
Sbjct: 651 LEKAISFVNLHEKW--------NAKVIYGDTDSMFVLLKGRTAKEAFQIGSEIASAITAM 702
Query: 703 FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVT 761
P+ L+ EKVY+P LI+KKRY G + NP + + + D KGIETVRRD C V ++
Sbjct: 703 NPSPVTLKMEKVYHPCFLITKKRYVGYSYENPNQIEPVFDAKGIETVRRDTCEAVAKIME 762
Query: 762 ECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL---TKTGDDYEVKAAHVE 818
+ L + + Y++ +L R+ L + K + T + + A +
Sbjct: 763 QSLRLFFEHQSLLEVKTYLQRQWKRILSGRVSLKDFIFAKEVRLGTYSARISSLPPAAIV 822
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP--IDTHYYLEN 876
+ MR D P +R+PYV+I GA+ + DP+ VL + P I+ YY+
Sbjct: 823 ATKAMRV-DRRAEPRYAERIPYVVIHGEPGARLVDMVVDPLEVLAIDSPFRINDLYYINK 881
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLS-------CIGC 929
QI L R+F L A + R + ++ ++ F + ++ C+ C
Sbjct: 882 QIIPALQRVFG--LVGADLNQWFAEMPRPVREASVKHAFTPNFQRTRIDYYYLSKHCVLC 939
Query: 930 KALI-SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGS---LHQDVLCT 985
L+ ++ LCS C E + + +LE L + CQ C G L V CT
Sbjct: 940 GGLVQASARLCSQCSENEVAAATAVIGKTAKLEQEMQHLVSICQHCGGGDRLLESGVKCT 999
Query: 986 SRDCPIFYRRKKAQKDMAEA 1005
S C +FY R+K QK++ A
Sbjct: 1000 SISCLVFYERRKVQKELLAA 1019
>gi|396467820|ref|XP_003838034.1| similar to DNA polymerase zeta catalytic subunit [Leptosphaeria
maculans JN3]
gi|312214599|emb|CBX94590.1| similar to DNA polymerase zeta catalytic subunit [Leptosphaeria
maculans JN3]
Length = 1679
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 198/607 (32%), Positives = 301/607 (49%), Gaps = 65/607 (10%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEA 506
E AR+ GV ++SRG KV S + R AK +N LV P+ KQ G + V+E
Sbjct: 1038 EQARLLGVDFFSVISRGSQYKVESTMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEP 1097
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---VTPEDARK-------------LNLP 550
++ FY P+ LDF SLYPS+M+AYN CYST +T R L L
Sbjct: 1098 QSAFYTSPLLVLDFQSLYPSVMIAYNFCYSTCLGRITSWRGRNKMGFMDFKREPQLLELV 1157
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAV---LDGRQ 607
+ +N P+G +VK ++K +L ++L ELL R K+ +K+ KD +KA+ L+ RQ
Sbjct: 1158 QDHINIAPNGMMYVKPEMRKSLLAKMLGELLETRVMVKSGMKQDKD--DKALQQLLNNRQ 1215
Query: 608 LALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNA 666
LALK+ AN YG+T A+ G++PC EI+ S+ GR+ +E L+ TT + A
Sbjct: 1216 LALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLEKAIALIH---TT---EKWGA 1269
Query: 667 EVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRY 726
EV+YGDTDS+ + T + A +G E + +S +PIKL+FEKVY+P +L++KKRY
Sbjct: 1270 EVVYGDTDSLFIYLKGRTRDQAFTIGEEISAAVSAANPRPIKLKFEKVYHPCVLLAKKRY 1329
Query: 727 AGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTIS 785
G Y +K + D KGIETVRRD + + L + D+ +Y + S
Sbjct: 1330 VGFKYEHRNQKEPEFDAKGIETVRRDGTPAEQKIEERALKILFRTSDLSQVKRYFQEQCS 1389
Query: 786 DLLMNRMDLSLLVITK--GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII 843
++ R+ + + K L D + A+RM D T P G+RVPYV+I
Sbjct: 1390 KIMEGRISIQDFLFAKEVKLGTYSDKGPPPPGALIAAKRMLA-DPRTEPQYGERVPYVVI 1448
Query: 844 KAAKGAKAYERSEDPIYVLENN-IPIDTHYYLENQISKPLLRIFEPILKNASK---ELLS 899
A GA+ +R P +L+N+ + +D YY+ + PL RIF + N + E+
Sbjct: 1449 TGAPGARLIDRCVSPETLLQNDHLELDAEYYISKNLIPPLERIFNLVGANVRQWYDEMPK 1508
Query: 900 GDHTRSISISTPSN----SGIMKFAKRQL-------SCIGCKALISNG------------ 936
R+I++ S +G K+ L +C+ C+A +
Sbjct: 1509 VQRIRNIALPLTSRLDNAAGASTSLKKTLESYMKSSTCLVCRAKLPPTPPHLPGVEAAAF 1568
Query: 937 ---TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD-VLCTSRDCPIF 992
LC C R A S++++ EV ++ C+ C + D + C S+DCP+F
Sbjct: 1569 AMLPLCEKCLIRPARSLFALKSRLRKNEVRVKQVEMVCRSCSSLVWGDEIKCDSKDCPVF 1628
Query: 993 YRRKKAQ 999
Y R + Q
Sbjct: 1629 YTRIREQ 1635
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 41/216 (18%)
Query: 112 LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA- 170
LS+ +IR FG T G VC +HG PY ++ + + + L + A
Sbjct: 35 LSAPQVPVIRAFGATETGQKVCAHIHGALPYLFLEYSGSLEEHVVEAYIAALRASIDHAL 94
Query: 171 ----NRNS--KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGI 224
RN+ +V +I +++ Y + FLKI + P + +L +G
Sbjct: 95 AATYRRNAFDGKSVYVGYISLIKGVPFFGY-NVGYKVFLKIYILNPMHMTRFADLLHQGA 153
Query: 225 QLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR-----------KTAK-- 271
L+ + F YE+++ + L++M D N+ G ++I ++R K K
Sbjct: 154 ILN----RVFQPYEAHLQYLLQWMCDYNLYGCDYINCAKVQFRGPVPDSDEVDTKVHKWH 209
Query: 272 ----------------TLSYCQLEFDCLYSDIISRH 291
S+C LE D DI++RH
Sbjct: 210 DASIPDTFIAEDDQYPRQSHCTLEVDICVQDILNRH 245
>gi|440633310|gb|ELR03229.1| hypothetical protein GMDG_01212 [Geomyces destructans 20631-21]
Length = 1742
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 185/602 (30%), Positives = 294/602 (48%), Gaps = 46/602 (7%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
+LD+ I E AR+ GV +LSRG KV S + R AK +N V+ P+ KQ G++
Sbjct: 1119 ILDQSELITRTSEQARLLGVDFFSVLSRGSQFKVESLMFRIAKPENFVLVSPSRKQVGAQ 1178
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT-------------- 540
V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1179 NALECLPLVMEPQSAFYTSPLLVLDFQSLYPSVMIAYNYCYSTFMGRIVNWRGGTGKMGF 1238
Query: 541 ---PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLK-EAKD 596
R L L + +N +P+G + K ++K +L ++L E+L R K+ +K + D
Sbjct: 1239 TEYQRQDRLLELLKDFINISPNGMMYTKPEIRKSLLAKMLGEILETRVMVKSGMKFDVND 1298
Query: 597 PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDK 655
+ +L+ RQLALK+ AN YG+T A+ G++PC+EI+ S+ R+ +E LV
Sbjct: 1299 KTTQKLLNNRQLALKLIANVTYGYTSASFSGRMPCVEIADSIVQTARETLEKAIALVH-- 1356
Query: 656 FTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
+V + AEV+YGDTDS+ + T + A +G E A+ ++ +P+KL+FEKVY
Sbjct: 1357 --SVKRW--GAEVVYGDTDSIFIYLKGRTKDQAFDIGNEIAERVTNMNPRPVKLKFEKVY 1412
Query: 716 YPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP 774
P +L++KKRY G Y ++ K D KGIETVRRD + + + L + D+
Sbjct: 1413 LPCVLLAKKRYVGFQYEKKDQQEPKFDAKGIETVRRDGTPAEQKIEEKALKILFRSADLS 1472
Query: 775 GAVQYVKSTISDLLMNRMDLSLLVITKG--LTKTGDDYEVKAAHVELAERMRKRDAATAP 832
Y ++ ++ + + K L D + +RM + D P
Sbjct: 1473 QVKDYFQAQCEKIMTGSVSIQDFCFAKEVRLGSYSDKGPPPPGALISIKRMLE-DHRVEP 1531
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLE-NNIPIDTHYYLENQISKPLLRIFEPILK 891
G+RVPYV+I GA+ +R P +L+ ++ +D+ YY+ + PL RIF +
Sbjct: 1532 QHGERVPYVVITGEPGARLIDRCVAPETLLQSDHNELDSEYYISKNLIPPLERIFSLVGA 1591
Query: 892 NASK---ELLSGDHTRSISIS---------TPSNSGIMKFAKRQLSCIGCK-ALISNGTL 938
N E+ R + + P N ++ + SC+ C+ L SN +
Sbjct: 1592 NVRSWYDEMPKVQRVRRVDVGPQLAGQPADVPFNKKTLESYMKSSSCLVCQDKLESNAAI 1651
Query: 939 CSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKK 997
C C G +++ +E + L + C+ C S +V C S+DCP+FY R K
Sbjct: 1652 CPTCLGNRPSSMLALQTRLTAMERKYQELESVCRSCSNISWTDEVRCDSKDCPVFYSRVK 1711
Query: 998 AQ 999
+
Sbjct: 1712 EK 1713
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 41/208 (19%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF----HQILEGRMREANRNS 174
++R+FG T G VC +HG PY YI + D++ + H ++ + + R
Sbjct: 42 VVRVFGTTETGQKVCAHIHGAFPYIYIDYNGQVTSDEVGAYIHRLHLSIDHALAVSYRRG 101
Query: 175 ---KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
+ +F+ I +V K Y Q +LKI P ++ +L +G +
Sbjct: 102 VYDRRTRFIARITLV-KGVPFYGYHVGYQYYLKIYALDPVVMTRLADLLRQG----AIMK 156
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEV-------PVGKYRKTAK------------- 271
+ F YE+++ F +++M D N+ G +I+ PV KY + +
Sbjct: 157 RVFQPYEAHLQFIMQWMTDYNLYGCGYIDSRQVYFRGPVPKYEELDRLSHLWHDRSIPAE 216
Query: 272 ---------TLSYCQLEFDCLYSDIISR 290
+S+C LE D + DI++R
Sbjct: 217 FVISEAKLPRVSHCSLEVDIMVQDILNR 244
>gi|340519636|gb|EGR49874.1| zeta catalytic subunit of dna polymerase [Trichoderma reesei QM6a]
Length = 1596
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 198/670 (29%), Positives = 332/670 (49%), Gaps = 42/670 (6%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR EV+ ++ Y + + +L+ + H+ + S ++G +
Sbjct: 912 TGRHMINIWRAMRGEVN---LLQYTMENV-VWHLLHRRIPHYPWRCLTSWHRSGKPQDVV 967
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
RL Y L +L+ I E AR+ GV + SRG KV S + R AK +
Sbjct: 968 RLLRYYRTRTRLDLEILESNELISRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1027
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ KQ G + V+E ++ FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 1028 NFMLVSPSRKQVGQQNALECLPLVMEPQSAFYSSPLVVLDFQSLYPSIMIAYNYCYSTFL 1087
Query: 540 T-------------PEDARK---LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
E R+ L+L + +N P+G +VK+ ++K +L ++L E+L
Sbjct: 1088 GRITDWRGKSKMGFAEYRRQDGLLSLLAKHINVAPNGMMYVKAEVRKSLLAKMLTEILET 1147
Query: 584 RKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K+ +D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1148 RIMVKSGMKQDRDDKTLQRLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTG 1207
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + +V + AEV+YGDTDS+ V + + A +G+E A I+
Sbjct: 1208 RETLERATAYIH----SVERW--GAEVVYGDTDSLFVYLKGRSRDEAFVIGQEIAQAITE 1261
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLV 760
KP+KL+FEKVY+P +L++KKRY G Y + + + D KGIETVRRD + +
Sbjct: 1262 RNPKPVKLKFEKVYHPCVLLAKKRYVGYRYESKDQAKPEFDAKGIETVRRDGTPAEQKIE 1321
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + D+ Y + ++ R+ + K + + ++ + A +
Sbjct: 1322 EKALRLLFETADLSQVKDYFQEQCRKVMSGRVSIQDFCFAKEVRLGSYSEHGLPPAGAMI 1381
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
+ R +D+ P G+RVPYV++ A GA+ +R P +L N + +D YY+ +
Sbjct: 1382 SARKMLQDSRAEPQYGERVPYVVVTGAPGARLIDRCVSPEELLRNPHWQLDADYYITKNL 1441
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSG--IMKFAKRQLSCIGC-KALISN 935
PL RIF + N + + R I + ++ ++C+ C + ++S+
Sbjct: 1442 IPPLERIFNLVGANVRQWYEAMPKIRRIQRTKGHGHKKRTLEAYMHSINCLVCGRKVVSS 1501
Query: 936 G--TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIF 992
+LCS C + + S++ +E + + CQ C+G ++V C S DCP+F
Sbjct: 1502 AEMSLCSFCYAKAPDSLLTLQSKLVAVERKYDEMKRICQGCEGLGPLEEVACDSHDCPVF 1561
Query: 993 YRRKKAQKDM 1002
+ R + + M
Sbjct: 1562 WTRTRLRSKM 1571
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------N 171
+IRIFG T G VC VHG PY Y+ + D + F L + A +
Sbjct: 41 VIRIFGSTEFGQKVCAHVHGVFPYLYVEYDGDLNQDAVGAFIYRLHLSIDHALAISYRRD 100
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
++ +FV I +V K Y +PFLKI + P ++ +L +G+ L
Sbjct: 101 QDGDKAKFVARITLV-KGVPFYGYAVGYKPFLKIYMFNPMVMTRLADLLQQGVILK---- 155
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIE 260
+ F YE+++ + L+FM+D N+ G +++E
Sbjct: 156 RKFQPYEAHLQYLLQFMVDYNLYGCDYVE 184
>gi|9628340|ref|NP_042931.1| DNA polymerase catalytic subunit [Human herpesvirus 6A]
gi|118883|sp|P28857.1|DPOL_HHV6U RecName: Full=DNA polymerase
gi|455196|gb|AAA74631.1| DNA polymerase [Human herpesvirus 6]
gi|854017|emb|CAA58372.1| U38, DNA polymerase [Human herpesvirus 6]
Length = 1012
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 182/536 (33%), Positives = 278/536 (51%), Gaps = 52/536 (9%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
EKE + + I R + YCL+D+ L RL ++ + F E+AR+ V
Sbjct: 452 EKEQLSYKEIPKKFISGPSGRAVVGKYCLQDSVLVVRLFKQINYHFEVAEVARLAHVTAR 511
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT-YEGATVLEARAGFYEKPIATL 518
++ GQ K+ +L +AK++N+++P++ + + QG Y+GATVLE + G+Y P
Sbjct: 512 CVVFEGQQKKIFPCILTEAKRRNMILPSMVSSHNRQGIGYKGATVLEPKTGYYAVPTVVF 571
Query: 519 DFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEI 576
DF SLYPSIMMA+NLCYSTLV E + + ET FVK +++ +L +
Sbjct: 572 DFQSLYPSIMMAHNLCYSTLVLDERQIAGLSESDILTVKLGDETHRFVKPCIRESVLGSL 631
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
L++ LA R+ KA+++ DP+ K +LD +QLALK + NSVYG TGA G LPC+ I++S
Sbjct: 632 LKDWLAKRREVKAEMQNCSDPMMKLLLDKKQLALKTTCNSVYGVTGAAHGLLPCVAIAAS 691
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGY-------------EHNAEVIYGDTDSVMVQFGVP 683
VT GR+M+ T V K + + + EVIYGDTDS+ +
Sbjct: 692 VTCLGREMLCSTVDYVNSKMQSEQFFCEEFGLTSSDFTGDLEVEVIYGDTDSIFMSVRNM 751
Query: 684 TVEAAMKLGREAADYISGTFIK-PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDT 742
++ ++ A +I+ K PIKLEFEK+ P +LI KKRY G + F
Sbjct: 752 VNQSLRRIAPMIAKHITDRLFKSPIKLEFEKILCPLILICKKRYIGRQDDSLLIF----- 806
Query: 743 KGIETVRRDNCLLVKNLVTECLHKILVDRDI-PGAVQYVKSTIS---------------- 785
KG++ VR+ +C VK +V + + + D ++ AV++ T +
Sbjct: 807 KGVDLVRKTSCDFVKGVVKDIVDLLFFDEEVQTAAVEFSHMTQTQLREQGVPVGIHKILR 866
Query: 786 -------DLLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPNVGDR 837
+L NR D+ L+++ L+K Y + AH+ + R+ +R PNVGDR
Sbjct: 867 RLCEAREELFQNRADVRHLMLSSVLSKEMAAYKQPNLAHLSVIRRLAQRKEEI-PNVGDR 925
Query: 838 VPYVIIKAAKGAKA---YERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL 890
+ YV+I + G K YE +EDP YV+E+ IPI Y + QI K + PI
Sbjct: 926 IMYVLIAPSIGNKQTHNYELAEDPNYVIEHKIPIHAEKYFD-QIIKAVTNAISPIF 980
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 144/306 (47%), Gaps = 30/306 (9%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
S +IR+FG T +G +C V G E YFY C G + + +L G ++ +
Sbjct: 113 SGTVIRMFGRTEDGEKICVNVFGQEQYFYCECVDGRSLKATIN-NLMLTGEVKMS----- 166
Query: 176 VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
FV IE K S+ Y K V+ S R + + +Q +G F+
Sbjct: 167 -CSFV--IEPADKLSLYGYNANTVVNLFK--VSFGNFYVSQR--IGKILQNEG-----FV 214
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGE 295
YE +V RF +D + W V + K S ++E +C SD++S E
Sbjct: 215 VYEIDVDVLTRFFVDNGFLSFGWYNVKKYIPQDMGKG-SNLEVEINCHVSDLVSL----E 269
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLVTLQGEKQPFIRNVMTLKSCA 353
+ SFDIEC G+ G+FP+ + D VIQ++ +++ E R++ TL +C
Sbjct: 270 DVNWPLYGCWSFDIECLGQNGNFPDAENLGDIVIQIS-VISFDTEGDRDERHLFTLGTCE 328
Query: 354 PIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL-IEKEDVHHSII--- 409
I GV + F +E ++LL + F+R P+ + GYNI FDL YL I + ++H I
Sbjct: 329 KIDGVHIYEFASEFELLLGFFIFLRIESPEFITGYNINNFDLKYLCIRMDKIYHYDIGCF 388
Query: 410 SDLQNG 415
S L+NG
Sbjct: 389 SKLKNG 394
>gi|321470469|gb|EFX81445.1| hypothetical protein DAPPUDRAFT_303502 [Daphnia pulex]
Length = 794
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 197/611 (32%), Positives = 299/611 (48%), Gaps = 63/611 (10%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGSE 494
L+++L I E+AR+ G+ + +RG +V S +LR AK KN V P+V Q
Sbjct: 189 LMEQLDVIGRTSELARLFGIQFYEVFTRGSQYRVESMMLRLAKPKNFIAVSPSVVQRSRM 248
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----------------- 537
+ +LE + FY P+ LDF SLYPS+++AYN CYST
Sbjct: 249 KAPEWLPLILEPESKFYTDPVLVLDFQSLYPSMIIAYNYCYSTCLGRTQLLGKNEPFEFG 308
Query: 538 ----LVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKE 593
L+ P RKL + + VN +P+G FVK ++ GI+P++L E+L R K +KE
Sbjct: 309 CTQLLIPPAVVRKL-VKQDLVNISPAGAVFVKPEVRTGIIPQMLSEILNTRIMVKQSMKE 367
Query: 594 AK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKL 651
+ D + V + RQL LK+ AN YG+T A G++PC+E+ SV S GR+ +E L
Sbjct: 368 YEGDTTLRRVFESRQLGLKLIANVTYGYTSANFSGRMPCVELGDSVVSKGRETLERAIHL 427
Query: 652 VEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEF 711
+E++ E A V+YGDTDSV V + E A K+G E A ++ +P+KL+F
Sbjct: 428 IEER------SEWKARVVYGDTDSVFVLLPGRSREEAFKIGDEIALTVTQANPQPVKLKF 481
Query: 712 EKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
EKVY P +L +KKRY G Y + +K + KGIETVRRD C V L+ L +
Sbjct: 482 EKVYQPCILQTKKRYVGYKYESVNQKEPVYEAKGIETVRRDGCPAVVKLLERSLRVLFES 541
Query: 771 RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDA 828
D+ YV+ + +L NR L + K + + Y+ A +E+++ + D
Sbjct: 542 CDVSKVKVYVQRQFTKILQNRNSLQDFIFAKEF-RGREGYKPGACVPALEISKSQSRIDR 600
Query: 829 ATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDT------HYYLENQISKPL 882
+ P +G+RVPY+++ + G + V N + IDT HYY+ I L
Sbjct: 601 RSEPRIGERVPYIVVYGSPGVPLIR-----LVVPANQLLIDTSLRLNAHYYITRAIIPAL 655
Query: 883 LRIFEPI----------LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL 932
R + L A S + S P + I ++ + C+ C
Sbjct: 656 QRCLGLLGVDVLSWYQSLPRACAPPTSAVPSED---SNPRKATISQYFGSSV-CLLCDDP 711
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQEL-EVLFGRLWTQCQECQGSLHQDVLCTSRDCPI 991
I LC+ C G + ++S +Q L E + L + CQ C G+ + C S DCP+
Sbjct: 712 ILTNGLCAAC-GSSRQTSAFSLSAMQRLREKDYTELISLCQSCTGNARIERDCISMDCPV 770
Query: 992 FYRRKKAQKDM 1002
YRR KA +++
Sbjct: 771 LYRRVKAFQNL 781
>gi|363990257|gb|AEW46232.1| DNA polymerase catalytic subunit [Cercopithecine herpesvirus 5]
Length = 1037
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 275/543 (50%), Gaps = 63/543 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KED+ + I +E R + YC++DA L + L + + F + +AR+ +P+
Sbjct: 470 QKEDLSYKEIPVRFIAGSEGRADVGKYCMQDALLVRDLFNIINFHYEAGAIARLAKIPMR 529
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSE----QGTYEGATVLEARAGFYEKPI 515
++ GQ I++ + LL + ++ ++PN K A + + +Y+GATV E + G+Y P+
Sbjct: 530 RVVFDGQQIRIYTSLLDECACRDFILPNHKGADASAENPEVSYQGATVFEPQIGYYSDPV 589
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET-----FVKSNLQK 570
DFASLYPSI+MA+NLCYSTL+ P+ PP+ T E F K+ +
Sbjct: 590 VVFDFASLYPSIIMAHNLCYSTLIMPDG----ECPPDTQVFTVELENGVTHRFAKNTARL 645
Query: 571 GILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPC 630
+L E+L + ++ R+ + ++ +DP+++ +LD QLALK++ N+ YGFTG G +PC
Sbjct: 646 SVLSELLTKWVSQRRAVRETMRGCQDPVKRMLLDKEQLALKVTCNAFYGFTGVVNGMMPC 705
Query: 631 IEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHN-------------AEVIYGDTDSVM 677
+ I++S+T GR M+ T VE+ FT + HN +VIYGDTDSV
Sbjct: 706 LPIAASITRIGRDMLTRTSTFVEENFTE-PCFLHNFFNREDYSGDPVEVKVIYGDTDSVF 764
Query: 678 VQFGVPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEK 736
V + T A + G A Y++ F+ PIKLEFEKV+ ++I KKRY G E
Sbjct: 765 VCYRGITATALINRGPSLAAYVTQCLFVDPIKLEFEKVFVSLMMICKKRYIGKVSGESE- 823
Query: 737 FDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP-GAVQYVKSTISDLLMNRMDLS 795
+ KG++ VR+ +C VKN+ + + + D ++ AVQ + T +L + L
Sbjct: 824 ---LSMKGVDLVRKTSCEFVKNVTRDIIQLLFDDPEVSRAAVQLSRLTFDELKAQGVPLG 880
Query: 796 LLVITKGLTKTGDDYEVKAA------------------------HVELAERMRKRDAATA 831
+ + L K DD A H+ + +R+ R +
Sbjct: 881 FWRVIQRLCKARDDLYTSRARVEELVLSSVLSKDVSLYKQANLPHIAVIKRLAAR-SEEL 939
Query: 832 PNVGDRVPYVIIKAAKGAKA----YERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
P VGDRV YV+ G YE +EDP YV E+ +PI Y + Q+ K + +
Sbjct: 940 PTVGDRVFYVLTYPGDGRTTGVCNYEIAEDPAYVREHGVPIHAEKYFD-QVIKAVTNVLS 998
Query: 888 PIL 890
P+
Sbjct: 999 PVF 1001
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 126/299 (42%), Gaps = 37/299 (12%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
S ++R FG T +GHS+C V G YFY G ++L + A+
Sbjct: 121 SGNVLRFFGATEQGHSICVNVFGQRSYFYCEYQDG----------ELLRDLLASASELVA 170
Query: 176 VPQFVRHIEMVQ--KRSIMYYQQQKSQPFLKIVVALPTMVASC-RGILDRGIQLDGLGMK 232
P+ + +VQ K SI Y + ++ ++ +M +L++G+ +
Sbjct: 171 EPRMSYALTIVQATKTSIYGYGTRPVPNLYQVSMSNWSMAKKIGEYLLEQGVPV------ 224
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
YE V R +ID + W V ++R K+ S C E DC +D+++
Sbjct: 225 ----YEIRVDPLTRLVIDKKMTTFGWCCVNRYEWRHKNKS-STCDFEIDCDVADLMAIAD 279
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIRNV---- 346
+ + +R LSFDIEC G FP E D +IQ++ + G + V
Sbjct: 280 D---TSWPVYRCLSFDIECMSASGGFPVAEQVDDIIIQISCVCYETGGTGREVSTVFGTS 336
Query: 347 ----MTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
T+ + DV F +E ++LL + F + P + GYNI FD Y++ +
Sbjct: 337 GMHLFTIGRGGGVGTADVYEFPSEYEMLLGFLIFFKRYAPCFVTGYNINAFDFKYILTR 395
>gi|189234256|ref|XP_001811647.1| PREDICTED: similar to DNA polymerase zeta catalytic subunit
[Tribolium castaneum]
gi|270002615|gb|EEZ99062.1| hypothetical protein TcasGA2_TC004938 [Tribolium castaneum]
Length = 1518
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 225/797 (28%), Positives = 359/797 (45%), Gaps = 105/797 (13%)
Query: 304 ILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI-VGVDVMS 362
ILS ++ R P+P +D + V + G V+TL P V D+++
Sbjct: 722 ILSLELHIETRGDLRPDPAYDSIRAVFYKIVEDGPGGT-TSGVITLDGVKPSEVRCDLLN 780
Query: 363 FETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK-EDVHHSIISDL-----QNGN 416
TE ++L ++ DPD+++GY I YL+++ + + H++++ L ++
Sbjct: 781 VSTEEELLNELVKLVQNHDPDILVGYEIEMCSWGYLLDRGQALGHALVTSLARVREKHSR 840
Query: 417 AETRRRLAVYCLKDAYLPQR----------------LLDKLMFIFNYVEMA--------- 451
E R+ L D + R LL + + ++++ ++A
Sbjct: 841 NEDSLRITGRILLDVWRLLRHEVALQSYTFENIVYHLLHQRIPLYSFKQLALWWHNPLFR 900
Query: 452 ---------RVTGV--------------------PISF--LLSRGQSIKVLSQLLRKAKQ 480
R +GV I F +LSRG +V S +LR AK
Sbjct: 901 HRTISHYLFRTSGVLQILEQLDLIGRTSELARLFGIQFFEVLSRGSQFRVESMMLRLAKP 960
Query: 481 KNL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
N V P+V+Q + +LE + Y P+ LDF SLYPS+++AYN C+ST
Sbjct: 961 LNFIPVSPSVQQRAKMKAPEFLPLILEPESKLYVDPVIVLDFQSLYPSMIIAYNYCFSTC 1020
Query: 539 ---------------------VTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
V+ + KL L +CVN +P G FVK ++ GILP +L
Sbjct: 1021 LGKVANLGKNAPFEFGATQLKVSKKQVEKL-LNDDCVNFSPCGVAFVKKQVRDGILPRML 1079
Query: 578 EELLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISS 635
E+L R K +K K D L + VL RQL LK+ AN YG+T A G++P +E+
Sbjct: 1080 REILDTRLMVKNAMKRNKDDQLLQKVLHSRQLGLKLIANVTYGYTSANFSGRMPAVEVGD 1139
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SV S GR+ ++ +LVE TT E A V+YGDTDS+ V + E A ++G++
Sbjct: 1140 SVVSKGRETLQRAIELVE---TT---KEWGARVVYGDTDSLFVLVKGKSREEAFEIGKKI 1193
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD-TKGIETVRRDNCL 754
AD ++ P+KL+ EK+Y+P +L +KKRY G + +P++ + + KGIETVRRD C
Sbjct: 1194 ADAVTKANPDPVKLKLEKIYHPCILQTKKRYVGYMYESPDQTEPIYLAKGIETVRRDGCP 1253
Query: 755 LVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA 814
V ++ +CL + +D+ +YV + +L R+ L L K + Y A
Sbjct: 1254 AVSKMLEKCLRLLFETKDVSLVKKYVLRQLDKILTGRVSLQDLTFAKEY-RGASGYRPGA 1312
Query: 815 A--HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPI-YVLENNIPIDTH 871
+ELA + D + P G+RVPY+I G P ++ + ++ +
Sbjct: 1313 CVPALELARKWTSVDRRSEPRRGERVPYIIANGPPGVPLIRLVRSPREFLTDASLRPNAI 1372
Query: 872 YYLENQISKPLLRIFEPILK--NASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGC 929
YY+ I P+ R F I NA + + + ++P + SC C
Sbjct: 1373 YYITKVIIPPINRCFNLIGADLNAWFNQMPRKQFQYLRNASPVKKSTISQYFVSNSCASC 1432
Query: 930 KALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
N LC C+ R +V+ E + + CQ C G + D C S DC
Sbjct: 1433 GEQTQND-LCEKCRERTQSTAVVLHEKVRIWEQSYYNINMICQSCTG-IFDDNACLSLDC 1490
Query: 990 PIFYRRKKAQKDMAEAK 1006
P+ YR + +D+ +AK
Sbjct: 1491 PVLYRINQTSRDLEQAK 1507
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSK 175
IRIFG T EG +C VHG PY YI P D S +QI + N + S
Sbjct: 41 IRIFGSTAEGQKICLHVHGVFPYLYI--PYDGSEDCNSLKYQIAASIDKALNVSFGQASA 98
Query: 176 VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
+ Q V I +V Y ++ Q F KI + P ++ +L Q + + + +
Sbjct: 99 LTQHVYKITLVSGIPFYGYHTREHQ-FFKIYLYNPNLIRKVGNML----QSEVIHGRLYQ 153
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISR 290
+ES++ + L+FMID N+ G + I + K+R + SY QLE D L +I++R
Sbjct: 154 PHESHIPYILQFMIDYNLHGMSRILLNDLKFRDDSHKQSYSQLEADTLCENILNR 208
>gi|71400981|ref|XP_803223.1| DNA polymerase delta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70865997|gb|EAN81777.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi]
Length = 214
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 162/207 (78%), Gaps = 3/207 (1%)
Query: 808 DDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP 867
++Y AHV L ERMRKRD A+APN+GDRV YVI++AAKGAKAYERSEDPIYVLENNIP
Sbjct: 3 NEYAGAQAHVALVERMRKRDPASAPNIGDRVAYVIVRAAKGAKAYERSEDPIYVLENNIP 62
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNS--GIMKFAKRQLS 925
IDT YYLE+Q++ PLLR+FE +L + S L+ GDHTR I +S PS + G+MKF K QL
Sbjct: 63 IDTQYYLEHQLAPPLLRVFEGVLDDPSV-LIKGDHTRHILVSAPSKNAGGLMKFVKIQLQ 121
Query: 926 CIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCT 985
CI C+A+I G LC +C+ +EA++Y K V++ E ++ ++WTQCQ+CQGSL+Q+V+CT
Sbjct: 122 CISCRAIIKEGALCDNCRHKEADVYGKIVAKRNHYEAIYSQVWTQCQQCQGSLNQEVICT 181
Query: 986 SRDCPIFYRRKKAQKDMAEAKLQLDRW 1012
S+DCP+FY RKK QKD+ E + LDR+
Sbjct: 182 SKDCPVFYMRKKVQKDVKEQQTLLDRF 208
>gi|359831963|gb|AEV80601.1| DNA polymerase catalytic subunit [Cercopithecine herpesvirus 5]
Length = 1037
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 171/543 (31%), Positives = 275/543 (50%), Gaps = 63/543 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I +E R + YC++DA L + L + + F + +AR+ +P+
Sbjct: 470 QKDDLSYKEIPVRFIAGSEGRADVGKYCMQDALLVRDLFNIINFHYEAGAIARLAKIPMR 529
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSE----QGTYEGATVLEARAGFYEKPI 515
++ GQ I++ + LL + ++ ++PN K A + + +Y+GATV E + G+Y P+
Sbjct: 530 RVVFDGQQIRIYTSLLDECACRDFILPNHKGADASAENPEVSYQGATVFEPQIGYYSDPV 589
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET-----FVKSNLQK 570
DFASLYPSI+MA+NLCYSTL+ P+ PP+ T E F K+ +
Sbjct: 590 VVFDFASLYPSIIMAHNLCYSTLIMPDG----ECPPDTQVFTVELENGVTHRFAKNTARL 645
Query: 571 GILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPC 630
+L E+L + ++ R+ + ++ +DP+++ +LD QLALK++ N+ YGFTG G +PC
Sbjct: 646 SVLSELLTKWVSQRRAVRETMRGCQDPVKRMLLDKEQLALKVTCNAFYGFTGVVNGMMPC 705
Query: 631 IEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHN-------------AEVIYGDTDSVM 677
+ I++S+T GR M+ T VE+ FT + HN +VIYGDTDSV
Sbjct: 706 LPIAASITRIGRDMLTRTSTFVEENFTE-PCFLHNFFNREDYSGDPVEVKVIYGDTDSVF 764
Query: 678 VQFGVPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEK 736
V + T A + G A Y++ F+ PIKLEFEKV+ ++I KKRY G E
Sbjct: 765 VCYRGITATALINRGSSLAAYVTQCLFVDPIKLEFEKVFVSLMMICKKRYIGKVSGESE- 823
Query: 737 FDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP-GAVQYVKSTISDLLMNRMDLS 795
+ KG++ VR+ +C VKN+ + + + D ++ AVQ + T +L + L
Sbjct: 824 ---LSMKGVDLVRKTSCEFVKNVTRDIIQLLFDDPEVSRAAVQLSRLTFDELKAQGVPLG 880
Query: 796 LLVITKGLTKTGDDYEVKAA------------------------HVELAERMRKRDAATA 831
+ + L K DD A H+ + +R+ R +
Sbjct: 881 FWRVIQRLCKARDDLYTSRARVEELVLSSVLSKDVSLYKQANLPHIAVIKRLAAR-SEEL 939
Query: 832 PNVGDRVPYVIIKAAKGAKA----YERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
P VGDRV YV+ G YE +EDP YV E+ +PI Y + Q+ K + +
Sbjct: 940 PTVGDRVFYVLTYPGDGRTTGVCNYEIAEDPAYVREHGVPIHAEKYFD-QVIKAVTNVLS 998
Query: 888 PIL 890
P+
Sbjct: 999 PVF 1001
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 128/301 (42%), Gaps = 37/301 (12%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
S ++R FG T +GHS+C V G YFY G ++L + A+
Sbjct: 121 SGNVLRFFGATEQGHSICVNVFGQRSYFYCEYQDG----------ELLRDLLASASELVA 170
Query: 176 VPQFVRHIEMVQ--KRSIMYYQQQKSQPFLKIVVALPTMVASC-RGILDRGIQLDGLGMK 232
P+ + + Q K SI Y + ++ ++ TM +L++G+ +
Sbjct: 171 EPRMSYALSIAQATKTSIYGYGTRPVPNLYQVSMSNWTMAKKIGEYLLEQGVPV------ 224
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
YE V R +ID + W V ++R K+ S C E DC +D+++
Sbjct: 225 ----YEIRVDPLTRLVIDKKMTTFGWCCVNRYEWRHKNKS-STCDFEIDCDVADLMAIAD 279
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIRNVM--- 347
+ + +R LSFDIEC G FP E D +IQ++ + G + V
Sbjct: 280 D---TSWPVYRCLSFDIECMSASGGFPVAEQVDDIIIQISCVCYETGGTGREVSTVFGTS 336
Query: 348 -----TLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKE 402
T+ SC + DV F +E ++LL + F + P + GYNI FD Y++ +
Sbjct: 337 GMHLFTIGSCGRVGTADVYEFPSEYEMLLGFLIFFKRYAPCFVTGYNINAFDFKYILTRL 396
Query: 403 D 403
D
Sbjct: 397 D 397
>gi|297678910|ref|XP_002817299.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit
[Pongo abelii]
Length = 3081
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 293/574 (51%), Gaps = 28/574 (4%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2499 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2558
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARKLNLPPE 552
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K L
Sbjct: 2559 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFTLQVR 2618
Query: 553 C-VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK-DPLEKAVLDGRQLAL 610
+ +P+G + ++KG+LP +LEE+L R K +K + D +LD RQL L
Sbjct: 2619 HDITVSPNGPS-----VRKGVLPRMLEEILKTRFMVKQSMKAYRQDRALSRMLDARQLGL 2673
Query: 611 KISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVI 669
K+ AN +G+T A G++PCIE+ S+ R+ +E KLV D T G A V+
Sbjct: 2674 KLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVND--TKKWG----ARVV 2727
Query: 670 YGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAG- 728
YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEKVY P +L +KKRY G
Sbjct: 2728 YGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGY 2787
Query: 729 LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLL 788
+Y T +K D KGIETVRRD+C V ++ L + RDI QYV+ LL
Sbjct: 2788 MYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVQRQCMKLL 2847
Query: 789 MNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAATAPNVGDRVPYVIIKAA 846
+ + + K + Y+ A +EL +M D + P VG+RVPYVII
Sbjct: 2848 EGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRSEPQVGERVPYVIIYGT 2906
Query: 847 KGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI---LKNASKELLSGDH 902
G + P+ VL++ + ++ YY+ QI PL RIF I + + EL
Sbjct: 2907 PGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLIGVDVFSWYHELPRIHK 2966
Query: 903 TRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELE 961
S S S P G + L C C L +G +CS C+ + +++ELE
Sbjct: 2967 ATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSHPQHVAVILNQEIRELE 3025
Query: 962 VLFGRLWTQCQEC-QGSLHQDVLCTSRDCPIFYR 994
+L C+ C + + + + C S CP+ ++
Sbjct: 3026 RKQEQLVKICKNCFRFAFDRHIPCVSPTCPVLFK 3059
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 10/144 (6%)
Query: 132 VCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQFVRHIEMVQ 187
C +HG PY Y+ G G S+ Q+ R N S Q V + +V
Sbjct: 18 TCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVS 76
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRF 247
Y +K + F+KI + P MV +L G ++ K + +E+++ + L+
Sbjct: 77 GMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHEAHIPYLLQL 131
Query: 248 MIDCNIVGGNWIEVPVGKYRKTAK 271
ID N+ G N I + K+RK +
Sbjct: 132 FIDYNLYGMNLINLAAVKFRKARR 155
>gi|425783247|gb|EKV21104.1| DNA polymerase [Penicillium digitatum Pd1]
Length = 1698
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 186/600 (31%), Positives = 301/600 (50%), Gaps = 45/600 (7%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEA 506
E AR+ G+ + ++SRG KV S + R AK +N LV P+ KQ G + VLE
Sbjct: 1090 EQARLLGIDFASVISRGSQFKVESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVLEP 1149
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT----------------PEDARKLNLP 550
++ FY P+ LDF SLYPS+M+AYN CYST + R L L
Sbjct: 1150 QSDFYTSPLLVLDFQSLYPSVMIAYNYCYSTFLGRAMHWRGRDKMGFMDYKRQPRLLELL 1209
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKD-PLEKAVLDGRQLA 609
+ +N +P+G + K ++ +L ++L E+L R K +K KD + + +L+ RQLA
Sbjct: 1210 KDKINISPNGMMYAKQEARQSLLAKMLSEILETRVMVKNGMKADKDDKVLQRLLNNRQLA 1269
Query: 610 LKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEV 668
LK+ AN YG+T A+ G++PC EI+ S+ GR+ +E + ++ + AEV
Sbjct: 1270 LKLIANVTYGYTSASFSGRMPCAEIADSIVQTGRETLEKAIAFIH----SIERW--GAEV 1323
Query: 669 IYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAG 728
+YGDTDS+ V T + A +G E A ++ +PIKL+FEKVY+P +L++KKRY G
Sbjct: 1324 VYGDTDSLFVHLKGRTRDQAFDIGEEIAQAVTDLNPRPIKLKFEKVYHPCILLAKKRYVG 1383
Query: 729 L-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDL 787
Y ++ + D KGIETVRRD + + + L + D+ Y + + +
Sbjct: 1384 FKYEHRNQQEPEFDAKGIETVRRDGTPAEQKIEEKALKILFRTADLSQVKSYFQRQCAKI 1443
Query: 788 LMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAA 846
+ R+ + + + T + + A + +RM + D + P G+RVPYV++ A
Sbjct: 1444 MQGRISIQDFCFAREVRLGTYSERSLPAGAMISTKRMME-DPRSEPQTGERVPYVVVTGA 1502
Query: 847 KGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDH 902
G++ +R P +L + + ID YY+ I PL RIF + N + E+
Sbjct: 1503 PGSRLIDRCVAPQTLLHDAQLEIDAEYYITKNIIPPLERIFNLVGANVRQWYDEMPRVQR 1562
Query: 903 TRSI---SISTP-SNSGI-----MKFAKRQLSCIGCKALISNGT--LCSHCKGREAELYC 951
R + +++ P S +G+ ++ R SC+ C+A +S+ +C C +
Sbjct: 1563 IRRVEGSALARPNSRAGVAPRKTLESYMRSSSCVVCRAKLSDAAVPVCGDCLQKPHITLL 1622
Query: 952 KTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
VS++Q E L C+ C G S +V C S DCP+FY R + + ++ L+
Sbjct: 1623 DVVSRLQRAEKRVVDLEAICRSCMGVSPGDEVSCDSLDCPVFYSRTRDAANWGHSRAVLE 1682
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 12/144 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------N 171
+IRIFG T G VC VHG PY YI + P+D++ + L + A N
Sbjct: 42 VIRIFGATETGQRVCVHVHGAFPYLYIEYNGSLAPEDVNSAIRTLHLSIDHALAVSFRRN 101
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
+ FV HI +V K Y + F KI + P + +L +G +
Sbjct: 102 AYDRRTAFVAHITLV-KGVPFYGYHVGWRFFFKIYLLSPFHITRLVDLLHQG----AVMK 156
Query: 232 KSFMTYESNVLFALRFMIDCNIVG 255
+ YE++V + ++M D N+ G
Sbjct: 157 RPLQPYEAHVQYIPQWMYDYNLYG 180
>gi|10140935|ref|NP_065512.1| DNA Polymerase [Alcelaphine herpesvirus 1]
gi|82046321|sp|O36363.1|DPOL_ALHV1 RecName: Full=DNA polymerase catalytic subunit
gi|2337976|gb|AAC58060.1| DNA Polymerase [Alcelaphine herpesvirus 1]
Length = 1026
Score = 269 bits (687), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 174/538 (32%), Positives = 285/538 (52%), Gaps = 53/538 (9%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K DV + I L G+++ R +L +YC++DA L LL M E+A++ +P
Sbjct: 485 KKNDVSYKDIPILFKGSSKDRAKLGMYCVQDAVLVIDLLKHFMTHIEITEIAKIANIPTR 544
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+LS GQ I+V + LL A++++ ++P + GS++G Y+GATV+ +GFY P+ +D
Sbjct: 545 RVLSDGQQIRVFTCLLAAAQERDYILP-MPVTGSQEG-YQGATVINPISGFYNTPVLVVD 602
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKL-NLPP---ECVNKTPSGETFVKSNLQKGILPE 575
FASLYPSI+ A+NLCYSTL+ +D K NL E + FVK + + +L
Sbjct: 603 FASLYPSIIQAHNLCYSTLIKQQDLPKFTNLTANDYETFMISGGPVHFVKKHKTESLLAS 662
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L+ LA RK K +L++ +D K +LD +QLA+K++ NSVYGFTG G LPC+ I+
Sbjct: 663 LLKTWLAKRKSIKKELEQCQDAKMKTILDKQQLAIKVTCNSVYGFTGVASGMLPCLMIAE 722
Query: 636 SVTSYGRQMIEHTKKLVED----KFTTVGGYEHNA---------EVIYGDTDSVMVQFGV 682
+VT GR M+E TK+ VE+ + +E V+YGDTDS+ ++
Sbjct: 723 TVTLQGRTMLEKTKQFVENVTVEYLQKICNFEVQCLPQHPNPKFRVVYGDTDSLFIKCEG 782
Query: 683 PTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
++ +K G A + S F PIKLE EKV+ +L++KKRY G+ N K+
Sbjct: 783 FAMDTVIKFGDALASHTSSVLFASPIKLESEKVFKCLMLLTKKRYVGILSNN-----KIL 837
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQ----------------------- 778
KG++ VR+ C+ V+ + L +L D ++ A Q
Sbjct: 838 MKGVDLVRKTACVYVQEVTRAVLELLLRDEEVKVAAQTLSYSPVANCFKTEPLLGFLKII 897
Query: 779 -YVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVGD 836
+ + SDL N++ ++ L + L+K +Y+ H+ + +++ R+ P + D
Sbjct: 898 DILNQSYSDLKSNKVPVANLTYSTELSKPFTEYKTTNLPHLAVYKKLAMRNEE-LPQIHD 956
Query: 837 RVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNAS 894
R+ YV +K + G + +EDP Y +N IPI + +Y + +I + I + + N +
Sbjct: 957 RISYVFVK-SNGHLVSDMAEDPTYAEQNKIPIASDWYFD-KIIHGVANILQCVFNNNT 1012
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 166/392 (42%), Gaps = 72/392 (18%)
Query: 24 QQATTPTTPVIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSG 83
+ A PT +D E L +LPE++ SL WA L G
Sbjct: 78 ETAIPPTAFYLDSELL---------VLPENKSSL-----------------WANETL--G 109
Query: 84 YVSQCQSIMFQQLDIDYVIGDSNR----------ELLPLSSGSAAIIRIFGVTREGHSVC 133
Q +MF DI V+ ++R +++P S +++++G T SVC
Sbjct: 110 NCHSIQELMFHVYDIVEVVYAADRCDSIPPHLQADIVP----SGIVLKLYGRTETNQSVC 165
Query: 134 CKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMY 193
V G + YFY+ D S+ + ++ ++E S H+ QK+ +
Sbjct: 166 VNVFGQKVYFYVY------NDSYSNLQRDVQHILQETGHRSTG----LHLCSTQKKFLSG 215
Query: 194 YQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNI 253
Y + + + + M + G L+ +G + F E+NV + RF++D
Sbjct: 216 YSTSSHEVYQITLGSSSAMRSLASG-------LEQIGYRVF---EANVDASTRFIVDNKF 265
Query: 254 VGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAG 313
W R ++ LE+DC DI E + ILSFDIEC G
Sbjct: 266 STFGWYTCTSPLARPRVHQDAHTHLEYDCSVGDI---QYHAERLDWPQYNILSFDIECLG 322
Query: 314 RKGHFP--EPTHDPVIQVANLVTLQG--EKQPFIRNVMTLKSCAPIVGVDVMSFETERDV 369
G FP + D +IQ++ ++ G +KQ I ++++ +C I V V F +E D+
Sbjct: 323 ESG-FPSADKDEDMIIQISCVIWTVGGDKKQECI--LLSVGTCDLIENVKVYEFPSEMDL 379
Query: 370 LLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
L + +R+ +++ GYNIC FD PY++ +
Sbjct: 380 LYGFFTLLRDYGIEMITGYNICNFDFPYILNR 411
>gi|189202408|ref|XP_001937540.1| DNA polymerase zeta catalytic subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984639|gb|EDU50127.1| DNA polymerase zeta catalytic subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1633
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 196/648 (30%), Positives = 309/648 (47%), Gaps = 54/648 (8%)
Query: 405 HHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSR 464
H + + NG ++ Y L +L+ + E AR+ GV ++SR
Sbjct: 961 HSDLTTWYTNGRPRDLTKVINYFTTRVQLNLDILEANDIVPRTSEQARLLGVDFFAVISR 1020
Query: 465 GQSIKVLSQLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFAS 522
G KV S + R AK +N LV P+ KQ G + V+E ++ FY P+ LDF S
Sbjct: 1021 GSQFKVESTMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSAFYTSPVLVLDFQS 1080
Query: 523 LYPSIMMAYNLCYSTLVT----------------PEDARKLNLPPECVNKTPSGETFVKS 566
LYPS+M+AYN CYST + + + L L + +N P+G +VK
Sbjct: 1081 LYPSVMIAYNYCYSTCLGRIVNWRGRNKMGFMDFKREPQLLELVKDHINIAPNGMMYVKP 1140
Query: 567 NLQKGILPEILEELLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV 625
++K +L ++L E+L R K+ +K+ K D + +L+ RQLALK+ AN YG+T A+
Sbjct: 1141 EMRKSLLAKMLGEILETRVMVKSGMKQDKNDKTLQQLLNNRQLALKLLANVTYGYTSASF 1200
Query: 626 -GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPT 684
G++PC EI+ S+ GR+ +E L+ + AEV+YGDTDS+ + T
Sbjct: 1201 SGRMPCSEIADSIVQTGRETLEKAIALIH------ATQKWGAEVVYGDTDSIFIHLKGRT 1254
Query: 685 VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTK 743
+ A +G E I+ +PIKL+FEKVY+P +L++KKRY G Y +K + D K
Sbjct: 1255 KDEAFTIGEEITAAITVANPRPIKLKFEKVYHPCVLLAKKRYVGFKYEHRNQKEPEFDAK 1314
Query: 744 GIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL 803
GIETVRRD + + + L + D+ +Y + ++ R+ + + K +
Sbjct: 1315 GIETVRRDGTPAEQKIEEKALKILFRTADLSQVKRYFQEQCFKIMEGRISIQDFLFAKEV 1374
Query: 804 ---TKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIY 860
T +G A + A + D T P G+RVPYV++ A GA+ +R P
Sbjct: 1375 KLGTYSGRGPPPPGALI--ATKRMLADPRTEPQYGERVPYVVVTGALGARLIDRCVSPET 1432
Query: 861 VLE-NNIPIDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDHTRSISISTPSNSG- 915
+L+ N++ +D YY+ + PL RIF + N + E+ R+ISI S S
Sbjct: 1433 LLQKNHLELDAEYYISKNLIPPLERIFNLVGANVRQWYDEMPKIQRIRNISIPVGSKSNG 1492
Query: 916 --IMKFAKRQLSCIGCKALISNGT--------------LCSHCKGREAELYCKTVSQVQE 959
++ + +C+ C++ +S+ T LC C + A +V
Sbjct: 1493 RRTLESYMKPSNCLVCRSKLSSPTQRPGAQTSPYAVLPLCVKCIKQPARSLLALKYRVLN 1552
Query: 960 LEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKKAQKDMAEAK 1006
E + C+ C + + V C SRDCP+FY R K +A K
Sbjct: 1553 SETRVTEVDAVCRRCANLAPGEQVKCDSRDCPVFYTRIKEYSKLAAIK 1600
>gi|121704870|ref|XP_001270698.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus clavatus
NRRL 1]
gi|119398844|gb|EAW09272.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus clavatus
NRRL 1]
Length = 1654
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 202/672 (30%), Positives = 324/672 (48%), Gaps = 52/672 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y + + +L+ + H+S + + ++G
Sbjct: 967 TGRHMINIWRSMRGELN---LLQYTMENV-VYHLLHRRIPHYSFRDLTAWYESGKPRNLL 1022
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
++ Y + + +LD I E AR+ G+ + SRG KV S + R AK +
Sbjct: 1023 KVVEYFVSRIQMNLEILDSNELIPRTSEQARLLGIDFFSVFSRGSQFKVESLMFRIAKPE 1082
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ KQ G + V+E ++ FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 1083 NFLLVSPSRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFL 1142
Query: 540 T----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
R L L + +N P+G +VK +++ +L +L E+L
Sbjct: 1143 GRARQWRGRNKMGFMDYKRQPRVLELLKDKINIAPNGMMYVKQEVRQSLLARMLAEILET 1202
Query: 584 RKRAKADLKEAKD-PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K +K KD + + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1203 RVMVKTGMKMDKDDKVLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQSG 1262
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E L+ +V + AEV+YGDTDS+ V T + A +G E A ++
Sbjct: 1263 RETLEKAIALIH----SVERW--GAEVVYGDTDSLFVYLKGRTRDEAFNIGEEIAKTVTD 1316
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLV 760
P+KL+FEKVY+P +L++KKRY G Y +K + D KGIETVRRD + +
Sbjct: 1317 MNPHPVKLKFEKVYHPCVLLAKKRYVGFKYEHRDQKEPEFDAKGIETVRRDGTPAEQKIE 1376
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + D+ QY + + +L R+ + K + T + + +
Sbjct: 1377 EKALKLLFRTADLSQVKQYFQKQCAKILQGRVSIQDFCFAKEVRLGTYSERGLLPPGAMI 1436
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
+ + D + P G+RVPYV++ A G++ +R P +L + + +D YY+ +
Sbjct: 1437 STKKMVEDPRSEPQYGERVPYVVVTGAPGSRLVDRCVAPEALLHDAQLELDAEYYITKNL 1496
Query: 879 SKPLLRIFEPILKNASK---ELLSGDHTRSISISTPSNSGIMKFAKRQL-------SCIG 928
PL RIF + N + E+ R + +T S K A++ L SCI
Sbjct: 1497 IPPLERIFNLVGANVRQWYEEMPKFQRIRRVEGATTSAG---KDARKTLESYMKSSSCIV 1553
Query: 929 CKALISNG--TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD-VLCT 985
CK+ + + +CS C + VS+ Q+ E L C+ C G D V C
Sbjct: 1554 CKSKLDDTGVPVCSDCLLQPHISLLSLVSRQQQAEKKNSDLHRVCRSCMGIPPGDEVTCN 1613
Query: 986 SRDCPIFYRRKK 997
S+DCP+FY R +
Sbjct: 1614 SKDCPVFYSRTR 1625
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 86/221 (38%), Gaps = 46/221 (20%)
Query: 99 DYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D +G ++ +P +IRIFG T G VC VHG PY YI + GP +
Sbjct: 29 DGAVGKYDKSKVP-------VIRIFGATETGQKVCVHVHGAFPYLYI---EYDGPLNAEQ 78
Query: 159 FHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG 218
H + R N K FV HI +V K Y + F KI + P V
Sbjct: 79 DHALALNYRR--NAYDKKTAFVAHITLV-KGVPFYGYHVGYRFFFKIYLLNPVYVTRLAD 135
Query: 219 ILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL----- 273
+L +G L + F YES++ + ++M D N+ G +++ K+R L
Sbjct: 136 LLLQGAVLK----RPFQPYESHLQYVPQWMCDYNLYGCAYMKCSKAKFRSRIPELFELTD 191
Query: 274 ------------------------SYCQLEFDCLYSDIISR 290
S+C LE D DI++R
Sbjct: 192 LSYRWHDRSIPPDCISDAAVLPKQSHCSLEVDVCVQDILNR 232
>gi|425780984|gb|EKV18966.1| DNA polymerase [Penicillium digitatum PHI26]
Length = 1678
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 185/596 (31%), Positives = 299/596 (50%), Gaps = 45/596 (7%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEA 506
E AR+ G+ + ++SRG KV S + R AK +N LV P+ KQ G + VLE
Sbjct: 1090 EQARLLGIDFASVISRGSQFKVESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVLEP 1149
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT----------------PEDARKLNLP 550
++ FY P+ LDF SLYPS+M+AYN CYST + R L L
Sbjct: 1150 QSDFYTSPLLVLDFQSLYPSVMIAYNYCYSTFLGRAMHWRGRDKMGFMDYKRQPRLLELL 1209
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKD-PLEKAVLDGRQLA 609
+ +N +P+G + K ++ +L ++L E+L R K +K KD + + +L+ RQLA
Sbjct: 1210 KDKINISPNGMMYAKQEARQSLLAKMLSEILETRVMVKNGMKADKDDKVLQRLLNNRQLA 1269
Query: 610 LKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEV 668
LK+ AN YG+T A+ G++PC EI+ S+ GR+ +E + ++ + AEV
Sbjct: 1270 LKLIANVTYGYTSASFSGRMPCAEIADSIVQTGRETLEKAIAFIH----SIERW--GAEV 1323
Query: 669 IYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAG 728
+YGDTDS+ V T + A +G E A ++ +PIKL+FEKVY+P +L++KKRY G
Sbjct: 1324 VYGDTDSLFVHLKGRTRDQAFDIGEEIAQAVTDLNPRPIKLKFEKVYHPCILLAKKRYVG 1383
Query: 729 L-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDL 787
Y ++ + D KGIETVRRD + + + L + D+ Y + + +
Sbjct: 1384 FKYEHRNQQEPEFDAKGIETVRRDGTPAEQKIEEKALKILFRTADLSQVKSYFQRQCAKI 1443
Query: 788 LMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAA 846
+ R+ + + + T + + A + +RM + D + P G+RVPYV++ A
Sbjct: 1444 MQGRISIQDFCFAREVRLGTYSERSLPAGAMISTKRMME-DPRSEPQTGERVPYVVVTGA 1502
Query: 847 KGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDH 902
G++ +R P +L + + ID YY+ I PL RIF + N + E+
Sbjct: 1503 PGSRLIDRCVAPQTLLHDAQLEIDAEYYITKNIIPPLERIFNLVGANVRQWYDEMPRVQR 1562
Query: 903 TRSI---SISTP-SNSGI-----MKFAKRQLSCIGCKALISNGT--LCSHCKGREAELYC 951
R + +++ P S +G+ ++ R SC+ C+A +S+ +C C +
Sbjct: 1563 IRRVEGSALARPNSRAGVAPRKTLESYMRSSSCVVCRAKLSDAAVPVCGDCLQKPHITLL 1622
Query: 952 KTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKKAQKDMAEAK 1006
VS++Q E L C+ C G S +V C S DCP+FY R + + ++
Sbjct: 1623 DVVSRLQRAEKRVVDLEAICRSCMGVSPGDEVSCDSLDCPVFYSRTRDAANWGHSR 1678
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------N 171
+IRIFG T G VC VHG PY YI + P+D++ + L + A N
Sbjct: 42 VIRIFGATETGQRVCVHVHGAFPYLYIEYNGSLAPEDVNSAIRTLHLSIDHALAVSFRRN 101
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
+ FV HI +V K Y + F KI + P + +L +G +
Sbjct: 102 AYDRRTAFVAHITLV-KGVPFYGYHVGWRFFFKIYLLSPFHITRLVDLLHQG----AVMK 156
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ YE++V + ++M D N+ G + K+R
Sbjct: 157 RPLQPYEAHVQYIPQWMYDYNLYGCATMSCSQVKFR 192
>gi|46129445|ref|XP_389074.1| hypothetical protein FG08898.1 [Gibberella zeae PH-1]
Length = 1681
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 199/668 (29%), Positives = 320/668 (47%), Gaps = 49/668 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y + +L+ K H+S + S ++G
Sbjct: 998 TGRHMVNVWRAMRGELN---LLQYTMENVAW-HLLHKRIPHYSWKSLTSWYKSGKHRELN 1053
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R+ Y L +LD I E AR+ GV + SRG KV S + R AK +
Sbjct: 1054 RMLRYYQNRTKLDIEILDANELIARTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1113
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ KQ G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1114 NFLLVSPSRKQVGGQNALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFL 1173
Query: 540 T-------------PEDARK---LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
E R+ L L + +N P+G + K+ ++K +L ++L E+L
Sbjct: 1174 GRVTNWRGTSKMGFTEYKRQQGLLTLLKDYINIAPNGMMYAKTEIRKSLLAKMLTEILET 1233
Query: 584 RKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1234 RVMVKSGMKQDKDDKTLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTG 1293
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + +V + AEV+YGDTDS+ + T + A +G E + I+
Sbjct: 1294 RETLERAIAYIH----SVEKW--GAEVVYGDTDSLFISLKGRTKDEAFDIGNEISKAITE 1347
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLV 760
+PIKL+FEKVY+P +L++KKRY G + + ++ + D KGIETVRRD + +
Sbjct: 1348 MNPQPIKLKFEKVYHPCVLLAKKRYVGYKYESKDQVKPEFDAKGIETVRRDGTPAEQMIE 1407
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + D+ +Y + ++ N + + K + T D A +
Sbjct: 1408 EKALRLLFETADLSQVKEYFQKQCQKIMRNNVSVQDFCFAKEVRLGTYSDKGAPPAGALI 1467
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
+ + +DA P G+RVPYV+I A GA+ +R P +L+N + +D YY+ +
Sbjct: 1468 STKRMLQDARAEPQYGERVPYVVITGAPGARLIDRCVAPEELLDNPHWQLDAEYYISKNL 1527
Query: 879 SKPLLRIFEPILKNASK------ELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL 932
PL RIF + N + ++ H ++S + MK C+ C
Sbjct: 1528 IPPLERIFNLVGANVRQWYDEMPKVQRVHHATTLSNKKTTLESYMK----STHCLVCNIK 1583
Query: 933 ISN--GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDC 989
S LC C+ +++ E + + C+ C G +DV C S+DC
Sbjct: 1584 FSQEGNPLCPTCRTNIPSALLSLQTRLTTEERCLQEILSLCRSCSGVGPVEDVQCDSKDC 1643
Query: 990 PIFYRRKK 997
P+F+ R K
Sbjct: 1644 PVFWTRMK 1651
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 49/213 (23%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF---------HQI-LEGRMR 168
I+RIFG T G VC +HG PY Y+ G+ PD++ + H + + R
Sbjct: 42 IVRIFGATETGQKVCAHIHGAFPYLYVEYEGGLSPDEVGAYIYRLHLSIDHALAVSYRRD 101
Query: 169 EANRNSKVPQFVRHIEMVQKRSIMYYQ-QQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
+ N N++ FV I +V + I +Y + FLKI + P ++ +L +G+ +
Sbjct: 102 QKNDNAR---FVARITLV--KGIPFYGFHVGYRFFLKIYMFNPVVMTRLADLLQQGVIMK 156
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIE-------VPVGKY-------------- 266
F YE+++ F L+FM D N+ G +++E PV +Y
Sbjct: 157 ----HKFQPYEAHLQFLLQFMTDFNLYGCDYLESSSTGFRSPVPEYGEETNSSHLWHSES 212
Query: 267 --------RKTAKTLSYCQLEFDCLYSDIISRH 291
T S+C LE D +I++RH
Sbjct: 213 IPQEDVTDETTLPRSSHCSLEVDICVQNILNRH 245
>gi|119493035|ref|XP_001263773.1| DNA polymerase zeta catalytic subunit, putative [Neosartorya fischeri
NRRL 181]
gi|119411933|gb|EAW21876.1| DNA polymerase zeta catalytic subunit, putative [Neosartorya fischeri
NRRL 181]
Length = 1686
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 199/670 (29%), Positives = 319/670 (47%), Gaps = 47/670 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y + +L+ + H+S + + Q+G
Sbjct: 998 TGRHMINIWRAMRSELN---LLQYTMENVVF-HLLHRRIPHYSYRDLTAWYQSGKPRDLL 1053
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
++ Y + + +L+ I E AR+ G+ + SRG KV S + R AK +
Sbjct: 1054 KVVEYFVSRVQMNLEILESNELIPRTSEQARLLGIDFFSVFSRGSQFKVESLMFRIAKPE 1113
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ +Q G + V+E ++ FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 1114 NYLLVSPSRRQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFL 1173
Query: 540 T----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
R L L + +N P+G + K +++ +L +L E+L
Sbjct: 1174 GRVSLWRGRNKMGFMDYKRQPRVLELLKDKINIAPNGMMYAKPEVRQSLLARMLAEILET 1233
Query: 584 RKRAKADLKEAKD-PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K +K KD + + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1234 RVMVKTGMKMDKDDKVLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQSG 1293
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E L+ +V + AEV+YGDTDS+ V T + A +G E A ++
Sbjct: 1294 RETLEKAIALIH----SVERW--GAEVVYGDTDSLFVYLKGRTRDEAFDIGEEIAKAVTD 1347
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLV 760
PIKL+FEKVY+P +L++KKRY G Y +K + D KGIETVRRD + +
Sbjct: 1348 INPHPIKLKFEKVYHPCVLLAKKRYVGFKYEHRNQKEPEFDAKGIETVRRDGTPAEQKIE 1407
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + D+ +Y + + ++ R+ + K + T + + +
Sbjct: 1408 EKALKLLFRTADLSQVKRYFQKQCAKIMQGRVSIQDFCFAKEVRLGTYSERGLLPPGAMI 1467
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
+ + D + P G+RVPYV++ A G++ +R P +L + + +D YY+ I
Sbjct: 1468 STKKMVEDPRSEPQYGERVPYVVVTGAPGSRLVDRCVAPETLLHDAELELDAEYYINKNI 1527
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAK--------RQLSCIGCK 930
PL RIF + N + + I + S K AK + SCI CK
Sbjct: 1528 IPPLERIFNLVGANVRQWYEEMPKFQLIRRIKGAASAAGKDAKGKTLESYMKSSSCIVCK 1587
Query: 931 ALISNGTL--CSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSR 987
+ + + + CS C + VS+ Q+ E L CQ C G DV+C S+
Sbjct: 1588 SKLDDTGIPVCSDCLQQPHISLLSLVSRQQQAEKRVSDLHRICQSCMGVPFGDDVICDSK 1647
Query: 988 DCPIFYRRKK 997
DCP+FY R +
Sbjct: 1648 DCPVFYSRTR 1657
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 70/166 (42%), Gaps = 18/166 (10%)
Query: 110 LPLSSGSAA--------IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQ 161
LP G+A +IRIFG T G VC VHG PY YI + GP D H
Sbjct: 25 LPYRDGAAGKYDRWKVPVIRIFGATETGQKVCVHVHGAFPYLYI---EYDGPLDPEQDHA 81
Query: 162 ILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD 221
+ R N K FV HI +V K Y + F KI + P +L
Sbjct: 82 LALNYRR--NAYDKKTAFVAHITLV-KGVPFYGYHVGYRFFFKIYLLDPVYTTRLADLLL 138
Query: 222 RGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+G L + YES++ + ++M D N+ G +++ K+R
Sbjct: 139 QGAVLK----RPLQPYESHLQYVPQWMCDYNLYGCAYMKCSRVKFR 180
>gi|395334320|gb|EJF66696.1| hypothetical protein DICSQDRAFT_176481 [Dichomitus squalens LYAD-421
SS1]
Length = 1668
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 195/617 (31%), Positives = 297/617 (48%), Gaps = 52/617 (8%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R+ Y + + +LD + E ARV GV +LSRG KV S + R AK +
Sbjct: 1020 RVLRYFARRTSMVLEMLDVAEVVTKNAEFARVFGVDFFSVLSRGSQYKVESFMFRIAKPE 1079
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
+ V+ P+ + G + ++E + FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 1080 SFVLLSPSKQDVGKQNAAECMPLIMEPLSAFYSSPLVVLDFQSLYPSIMIAYNYCYSTCL 1139
Query: 540 TP----------------EDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
+ A L+ E +N P+G +VK +++KG+L +L ELL
Sbjct: 1140 GRITDFKGTYKFGVTDLRQPAGLLDTLQEHINVAPNGIMYVKESVRKGLLGRMLTELLET 1199
Query: 584 RKRAKADLKEAKDPLEKA---VLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTS 639
R K +K AKD +KA +LD RQL LK AN YG+T AT G++P +EI+ S+
Sbjct: 1200 RVMVKQAMKGAKD--DKALRRILDARQLGLKFIANVTYGYTSATFSGRMPAVEIADSIVQ 1257
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
GR+ +E +++ TT G A+V+YGDTDS+ + T E A ++G++ AD I
Sbjct: 1258 SGRETLEKAIRIINS--TTKWG----AKVVYGDTDSLFIYLPGKTKEQAFRIGQDMADTI 1311
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLLVKN 758
+ P+KL+FEKVY P +L++KKRY G + NP +K D KGIETVRRD +
Sbjct: 1312 TLMNPAPVKLKFEKVYLPCVLMAKKRYVGFKFENPDDKEPAFDAKGIETVRRDGVRAQQK 1371
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHV 817
+ CL + +D+ +Y T +L N++ + + K + T D V
Sbjct: 1372 MTETCLKILFRTQDLSQVKEYCCRTWGRILENKVSVQDFIFAKEVKMGTYSDKVPPPPGV 1431
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL-ENNIPIDTHYYLEN 876
+A R D P G+R+PYVI + G++ +R+ P + +++ +D YY+
Sbjct: 1432 TVAARRMLEDPNDEPQYGERIPYVIARGEPGSRLVDRAISPHELFRDSHKRLDAAYYISR 1491
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQL------------ 924
+ PL RIF L A D +S+ P + + KR +
Sbjct: 1492 VLIPPLERIFN--LVGADVRSWFDDMPKSLRADQPDITFSPRKNKRNVLVANALKIDDHF 1549
Query: 925 ---SCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSL-HQ 980
C+ C LC C+ A + +S++++ E + C C G+ +
Sbjct: 1550 TSSQCLICGRFTPEA-LCELCRSDSALTMSELLSRMRKTEAKLKDVHLVCGSCCGNAPAE 1608
Query: 981 DVLCTSRDCPIFYRRKK 997
V C S DCP Y RKK
Sbjct: 1609 PVQCESLDCPWMYERKK 1625
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 86 SQCQSIMFQQLDIDYVIGDSNRELLPLSSGS---AAIIRIFGVTREGHSVCCKVHGFEPY 142
SQ ++ + IDY + PL + S +IRI+G + G C VH PY
Sbjct: 3 SQTPTLRVRINQIDYAMSAPG----PLDNSSLYRVPVIRIYGDSSIGLKACLHVHQVYPY 58
Query: 143 FYISCPQGMGPDDISHFHQILEGRMREA-----NRNSKVP--QFVRHIEMVQKRSIMYYQ 195
F++ M PD ++ + L+ + A RN + P QFVR + +V+ +
Sbjct: 59 FFVEYLGKMNPDVVNRYVTKLKHSLNHAIAISMKRNPQSPKSQFVRAVVLVKGVHFYGFH 118
Query: 196 QQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVG 255
S PFLK+ +A P V I+ G + F YES++ + L+F+ D + G
Sbjct: 119 ANYS-PFLKVHIADPAYVNRAVTIMQSGTIMK----TRFRVYESHLSYILQFLSDFGLYG 173
Query: 256 GNWIEV 261
WI++
Sbjct: 174 CGWIDL 179
>gi|71006944|ref|XP_758078.1| hypothetical protein UM01931.1 [Ustilago maydis 521]
gi|46097152|gb|EAK82385.1| hypothetical protein UM01931.1 [Ustilago maydis 521]
Length = 1678
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 209/703 (29%), Positives = 328/703 (46%), Gaps = 70/703 (9%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLA 424
T R L WR E+ ++ N+C L I K H ++ ++G AE RR
Sbjct: 952 TGRHTLNLWRLMKGELTLNLYTLENVCYHLLHRRIPKYS-HQTLTQWYKSGRAELIRRAL 1010
Query: 425 VYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV 484
+Y + L ++ + F+ E AR+ G+ ++SRG KV S +LR AK +N V
Sbjct: 1011 LYYVDMVELELEIIAESEFVLRTAEFARIYGIDFFSVISRGSQFKVESIMLRIAKPENFV 1070
Query: 485 I--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE 542
+ P+ Q G + ++E ++ FY+ P+ LDF SLYPSIM+AYNLCYST +
Sbjct: 1071 LISPSRAQVGKQNAAECLPLIMEPQSAFYKGPLIVLDFQSLYPSIMIAYNLCYSTCLGRV 1130
Query: 543 DARK----------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKR 586
K L+L + VN + +G FVK +++K +L ++L E+L R
Sbjct: 1131 AGFKGTSKFGVTEYAPPKGLLSLLQDDVNISSNGLLFVKPSVRKSLLAKMLSEILDTRVM 1190
Query: 587 AKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQM 644
K+ +K K D + + + RQ++LK+ AN YG+T A+ G++PC+EI+ ++ GR+
Sbjct: 1191 VKSSMKATKSDKSFQRIQNARQISLKLLANVTYGYTSASFSGRMPCVEIADAIVQTGRET 1250
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
+E L+ G E A+V+YGDTDS+ V T E A LG AD ++
Sbjct: 1251 LEKAMDLIN------GTEEWGAQVVYGDTDSLFVYLPGRTKEEAFTLGNVIADKVTSLNP 1304
Query: 705 KPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTEC 763
+P+KL+FEKVY P +L++KKRY G Y T E+ D KGIETVRRD ++ ++ C
Sbjct: 1305 RPVKLKFEKVYLPSVLLAKKRYVGFKYETLDEREPGFDAKGIETVRRDFHPAIQRMLEAC 1364
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAER 822
+ + RD+ Y++ +L R+ + K + + D +A R
Sbjct: 1365 IRILFRSRDLSLVKSYLQRQWRKILEGRVSAQDFIFAKEVRLGSYSDKVAPPPGAAVASR 1424
Query: 823 MRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKP 881
D + P G+RVPY+I + AK +++ P L++ + I+ YY+ I P
Sbjct: 1425 RMLADPRSEPQYGERVPYIISQGEPRAKLNQQAVSPEAFLKDPQLQINALYYITRTIIPP 1484
Query: 882 LLRIFE-------------PILKNA--SKELLSGDHTRSISISTPSNS----GIMKFAKR 922
L R+F P NA +K + + ++ PS+S G A +
Sbjct: 1485 LARVFNLLGADVEAWFHHMPKPNNAYWNKRPTAALLSALLAQQDPSSSTHEIGSDSAASK 1544
Query: 923 QLSCIGCKALISN--GTLCSHCKGREAELYC------------KTVSQVQELEVLFGRLW 968
S L S+ C C R L C T S++ +LE +
Sbjct: 1545 ATSSTAIATLNSHYATETCLLCSSRTEALVCLDCRQSPLESIHATSSKLHKLEAQVAAID 1604
Query: 969 TQCQECQGSLHQD----VLCTSRDCPIFYRRKKAQKDMAEAKL 1007
+ C C H + V C S DCP Y++ K K + + L
Sbjct: 1605 SICSTCA---HMERPGPVDCVSFDCPYTYQKTKVHKSLQDTAL 1644
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI-SHFHQILEG-------RMREA 170
++R+FG T G VC +H PY YI + PD++ + H++ G +R
Sbjct: 71 VLRLFGATPAGQRVCLYIHNVYPYCYIQYKGSLDPDNVLRYIHRLGRGLNAAMAASLRRN 130
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
++ QF+ I + + + Y S +LKI P IL+ G G+
Sbjct: 131 LHDTDANQFIAAIHLCKGVNFYGYHVGYSY-YLKISFVDPAHNYRIAAILESG----GVM 185
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F +E ++ + L+FM+D NI G +++++ ++R
Sbjct: 186 KTVFQPFEIHIRYQLQFMLDYNIFGCDYVDLDDIRFR 222
>gi|24943095|ref|NP_733857.1| ORF5 [callitrichine herpesvirus 3]
gi|13676646|gb|AAK38212.1|AF319782_6 ORF5 [callitrichine herpesvirus 3]
Length = 1016
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 178/550 (32%), Positives = 280/550 (50%), Gaps = 59/550 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+ I L E R+RL +YC++D+ L LL+ + E+A++ +P
Sbjct: 464 KKEDVHYKEIPHLFRAGPEERKRLGMYCIQDSVLVMDLLNHFVTHVEISEIAKIANIPCR 523
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L GQ I+V S LL A+++ ++P + S++ Y+GATV++ AGFY P+ +D
Sbjct: 524 RVLDDGQQIRVFSCLLAAAQKEGFILPMPEP--SDRDGYQGATVIQPIAGFYNSPVLVVD 581
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKL-NLPP----ECVNKTPSGETFVKSNLQKGILP 574
FASLYPSI+ A+NLCYST+VTP + KL +L P E + + FVK ++ K L
Sbjct: 582 FASLYPSIIQAHNLCYSTIVTPGEEGKLRDLRPGEDYESFSLSGGTFHFVKKHIHKSFLA 641
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
+LE LA RK + L DP ++ +LD +QLA+K + N+VYGFTG G PC+ I+
Sbjct: 642 SLLESWLAKRKAIRKLLGACNDPRQRTILDKQQLAIKCTCNAVYGFTGVAHGLFPCLTIA 701
Query: 635 SSVTSYGRQMIEHTKKLVEDKFTT---------VGGYEHNAE----VIYGDTDSVMVQFG 681
+VT GR M+E K VE+ T + N + VIYGDTDS+ ++
Sbjct: 702 ETVTLQGRTMLERAKVFVENLSLTDLEKLAPCSATPWSFNPDGILRVIYGDTDSLFIECS 761
Query: 682 VPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM 740
+ E L A + + + F PI LE EK++ +LI+KKRY G+ K+
Sbjct: 762 GFSEEQVSALSEPLARFTTSSLFNAPISLEAEKIFSCLMLITKKRYVGVLTDG-----KI 816
Query: 741 DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------ 776
KG++ VR+ C V+ L IL + + A
Sbjct: 817 TMKGVDLVRKTACQFVQTRCRRVLDLILGNDKVKRAASILSLRPYQTSFTEGLPEGFLDV 876
Query: 777 VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVG 835
+ + DL NR+ +S L T L++ Y+ + H+ + +++ R+ P +
Sbjct: 877 INVLNEAYGDLRANRVPISELSFTTELSRQISAYKSTQMPHLIVYQKILARNEE-PPQIH 935
Query: 836 DRVPYVIIKAAKGAKA------YERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPI 889
DR+PYV + +A+G ++ E +EDP YV +NIPI +Y E ++ + I + +
Sbjct: 936 DRIPYVFVASAEGGRSGRGTRKSEMAEDPSYVTRHNIPIAVEHYFE-KLLQGTANILQCL 994
Query: 890 LKNASKELLS 899
N + LS
Sbjct: 995 FGNNPETALS 1004
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 143/287 (49%), Gaps = 25/287 (8%)
Query: 119 IIRIFGVTRE-GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP 177
+I++ G RE G SVC V G + YFY P + + +IL+G + ++
Sbjct: 123 VIKLLGRRREDGASVCINVFGQQGYFYSETPADVNIE--VALVEILKGGTFDRRTPCRMA 180
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
+E V++RSIM Y K + KI ++ P ++ L D G K F
Sbjct: 181 -----VETVERRSIMGYGNTKRM-YHKITLSHPNSISHAATSLK-----DKYGCKIF--- 226
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFS 297
E+NV + RF++D W R + S+ E+DC +D+ G
Sbjct: 227 EANVDASRRFVLDNKFTTFGWYRCGRAMPRIRDRD-SFADFEYDCEVTDL---SVIGNDV 282
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLVTLQGEKQPFIRNVM-TLKSCAP 354
P+ +++FDIEC G +G FP T+ D +IQ++ ++ GE R ++ T+ +CA
Sbjct: 283 SWPPYMVMAFDIECLGEEG-FPNATNETDLIIQISCVLWSVGEPTSNYRRILLTVGTCAE 341
Query: 355 IVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
I GV+V F +E D++ A+ IR+++ +++ GYN+ FD PY++++
Sbjct: 342 IDGVEVYEFPSEMDLIYAFFQLIRDLNVEIITGYNVANFDWPYILDR 388
>gi|317414278|dbj|BAJ61051.1| DNA polymerase [Chlorella virus BW1]
Length = 658
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/406 (39%), Positives = 233/406 (57%), Gaps = 25/406 (6%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K D+ I + G A+ R +A Y KD LP +LL K+ + + EMA VP+
Sbjct: 263 QKNDLPAMQIFEKFEGGADDRAIIAAYAAKDTDLPLKLLKKMAILEDITEMANAVKVPVD 322
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ RGQ ++ S L+ KA+Q N IP+ K + G YEGATVL+A+ G Y PIA LD
Sbjct: 323 YINFRGQQVRAFSCLVGKARQMNYAIPDDKM-WTVDGKYEGATVLDAKKGAYFTPIAALD 381
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVK-------SNLQKGI 572
FASLYPSI+ A+N+ TLV D R NLP + +G K ++ +G+
Sbjct: 382 FASLYPSIIRAHNMSPETLVM--DKRFENLPGIEYYEIETGLGTFKYAQKNDETDEGQGV 439
Query: 573 LPEILEELLAARKRAKADLKEAK---DPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
+P +L++L RK+AK + EAK D +A+ D +Q + K+ NSVYGF GA+ G +P
Sbjct: 440 VPALLDDLAKFRKQAKKHMAEAKKNDDEFREALYDAQQRSFKVVMNSVYGFLGASRGFIP 499
Query: 630 CIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPT----- 684
C+ I++SVT+ GR+MIEHT K V + +EVIYGDTDSVMV+ +P
Sbjct: 500 CVPIAASVTATGRKMIEHTSKRVTELLP-------GSEVIYGDTDSVMVKMKLPDDKIHD 552
Query: 685 VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKG 744
++ K+ + A I+ F P LEFEK+YYPY+L SKKRYA + + +P++ K+D KG
Sbjct: 553 MDEQFKMAKWLAGEITKDFRAPNDLEFEKIYYPYILYSKKRYAAVKFEDPDEKGKVDVKG 612
Query: 745 IETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMN 790
+ VRRD + + ++ E L IL +D P AV I +L N
Sbjct: 613 LALVRRDFSPITREILKESLDTILFKKDTPTAVTETLEQIRKVLDN 658
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPE 293
+ YES+V +R NI +W+ + K +S +E + + +
Sbjct: 17 YQIYESSVDPIIRIFHLRNINPADWVHI--SKAFPVETRISNSDIEVETSFQHL----GP 70
Query: 294 GEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKS 351
+ ++ P I S+DIE + FP E + D IQ+A GE +P+ R V+ K
Sbjct: 71 SDIKEVPPLIIASWDIETYSKDRKFPLAENSTDYCIQIATTFQKYGEPEPYRRVVVCYKQ 130
Query: 352 CAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
AP+ GV+++S E DV+ W +++ D+ IGYN+ ++DL Y+
Sbjct: 131 TAPVEGVEIISCAEEADVMNTWMTILQDEKTDISIGYNLWQYDLRYI 177
>gi|395816788|ref|XP_003781872.1| PREDICTED: DNA polymerase zeta catalytic subunit [Otolemur garnettii]
Length = 3076
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 196/604 (32%), Positives = 306/604 (50%), Gaps = 53/604 (8%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+++Q
Sbjct: 2482 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSR 2541
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2542 MRAPQCIPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2601
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2602 GCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 2661
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D + +LD RQL LK+ AN +G+T A G++PC+E+ S+ R+ +E KLV
Sbjct: 2662 QDRVLSRMLDARQLGLKLIANVTFGYTSAHFSGRMPCVEVGDSIVHKARETLERAIKLVN 2721
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A+V+YGDTDS+ V T E + K+G+E A+ ++ T KP
Sbjct: 2722 D--TKKWG----AKVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKP------- 2768
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2769 VYLPCVLQTKKRYVGYMYETLDQKDPIFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2828
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2829 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFCYKPGACVPALELTRKMLTYDRRS 2887
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2888 EPRVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLI 2947
Query: 890 LKNASKELLSGDHT-RSISISTPSNSGIMKFAKRQLS-------CIGCKALISNGTLCSH 941
++ S H I +T S+ ++ K +S C C L +G +CS
Sbjct: 2948 ----GIDVFSWYHELPRIQKATSSSRNELEGRKGTISQYFTTLHCPVCDDLTQHG-ICSK 3002
Query: 942 CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKD 1001
C+ + + +++ELE +L C+ C G + + C S +CP+ ++ + ++
Sbjct: 3003 CRSQPQHVAVILNQEIRELERKQEQLVKICKSCAGCFDRHIPCVSLNCPVLFKLSRVNRE 3062
Query: 1002 MAEA 1005
+++A
Sbjct: 3063 LSKA 3066
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 123 FGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNSKVPQ 178
FG T G C +HG PY Y+ G G S+ Q+ R N S Q
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPY-DGYGHQPESYLSQMAFSIDRALNVALGNPSSTAQ 99
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V + +V Y +K + F+KI + P MV +L G ++ K + +E
Sbjct: 100 HVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAMVKRICELLQSGAIMN----KFYQPHE 154
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+++ + L+ ID N+ G N I + K+RK +
Sbjct: 155 AHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|361125018|gb|EHK97080.1| putative DNA polymerase zeta catalytic subunit [Glarea lozoyensis
74030]
Length = 1121
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 192/613 (31%), Positives = 300/613 (48%), Gaps = 47/613 (7%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN--LVIPNVKQAGSE 494
LL++ I E AR+ GV + SRG KV S + R AK +N LV P+ KQ G +
Sbjct: 499 LLEQNELIARTSEQARLLGVDFFSVFSRGSQYKVESLMFRIAKPENFMLVSPSRKQVGGQ 558
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT-------------- 540
V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 559 NALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRVINWRGTNKMGFT 618
Query: 541 --PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPL 598
R L L + VN +P+G +VK ++K +L ++L E+L R K+ +K KD
Sbjct: 619 EYKRQQRLLELLKDHVNISPNGMMYVKPEIRKSLLAKMLGEILETRVMVKSGMKIDKD-- 676
Query: 599 EKAV---LDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVED 654
+KA+ L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+ +E L+
Sbjct: 677 DKALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIALIH- 735
Query: 655 KFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKV 714
+V + AEV+YGDTDS+ V T + A +G E A I+ +P+KL+FEKV
Sbjct: 736 ---SVKRW--GAEVVYGDTDSLFVYLKGRTKDQAFDIGEEIAKTITKMNPRPVKLKFEKV 790
Query: 715 YYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
Y P +L++KKRY G Y +K D KGIETVRRD + + + L + D+
Sbjct: 791 YLPCVLLAKKRYVGFKYEYRDQKEPDFDAKGIETVRRDGTPAEQKIEEKALKILFRTADL 850
Query: 774 PGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAP 832
Y + ++ + + + + T D ++ + DA P
Sbjct: 851 SEVKNYFQKQCEKIMKGSVSIQDFCFAREVKLGTYSDKGPPPPGALISTKRMLEDARAEP 910
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYYLENQISKPLLRIFEPI-- 889
G+RVPYV+I A GA+ +R P +LEN+ +D+ YY+ + PL RIF +
Sbjct: 911 QYGERVPYVVITGAPGARLIDRCVAPEELLENDHSELDSEYYISKNLIPPLERIFNVVGA 970
Query: 890 -LKNASKELLSGDHTRSISIS--TPSNSGIMKFAKRQL-------SCIGCKALIS-NGTL 938
++N E+ R + ++ S + +K+ L +C+ CK + G +
Sbjct: 971 NVRNWYDEMPKYQRVRRVDVNLQMQGQSKELAMSKKTLESYMKSSACLVCKEKLEFEGPI 1030
Query: 939 CSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKK 997
C C + +++ E + + CQ C G S +V C S+DCP+FY R +
Sbjct: 1031 CLKCLADKPRSVLSLRTKLSSEEKKYMDMIRICQSCSGISPLDEVRCDSKDCPVFYSRTR 1090
Query: 998 AQKDMAEAKLQLD 1010
+ + K+ ++
Sbjct: 1091 QKARLKTEKMTIE 1103
>gi|302505098|ref|XP_003014770.1| hypothetical protein ARB_07331 [Arthroderma benhamiae CBS 112371]
gi|291178076|gb|EFE33867.1| hypothetical protein ARB_07331 [Arthroderma benhamiae CBS 112371]
Length = 1660
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 193/624 (30%), Positives = 308/624 (49%), Gaps = 58/624 (9%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
+LD I E AR+ G+ + SRG KV S + R AK +N ++ P+ KQ G +
Sbjct: 1021 ILDANELISRTSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFILISPSRKQVGQQ 1080
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT-------------- 540
V+E ++ FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 1081 NALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIFNWRGRNKMGIT 1140
Query: 541 --PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKD-- 596
+ L L + +N P+G +VK ++K +L ++L E+L R K +KE KD
Sbjct: 1141 DYEREPGLLGLLKDKINIAPNGIIYVKQEVRKSLLAKMLTEILETRVMVKNGMKEDKDDR 1200
Query: 597 PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDK 655
PL++ +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +E L+
Sbjct: 1201 PLQR-LLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTARETLEKAIALIH-- 1257
Query: 656 FTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
+V + AEV+YGDTDS+ + T A LG E A I+ + +P+KL+FEKVY
Sbjct: 1258 --SVKRW--GAEVVYGDTDSLFIYLKGRTRAEAFDLGEEIAKTITDSNPRPVKLKFEKVY 1313
Query: 716 YPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP 774
+P +L++KKRY G Y + ++ + D KGIETVRRD + + + L + D+
Sbjct: 1314 HPCVLLAKKRYVGYKYESKNQEKPEFDAKGIETVRRDGTPAEQKIEEKALRLLFETSDLS 1373
Query: 775 GAVQYVKSTISDLLMNRMDLSLLVITK--GLTKTGDDYEVKAAHVELAERMRKRDAATAP 832
+Y + S ++ ++ + K L D + A+RM + D P
Sbjct: 1374 RVKEYFQKQCSKIMRGKVSVQDFCFAKEVKLGTYSDRGAPPPGALISAKRMLE-DPRLEP 1432
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILK 891
G+RVPYV++ A GA+ +R P +L++ + +D YY+ + PL RIF +
Sbjct: 1433 QYGERVPYVVVSGAPGARLIDRCFPPEVLLQDPQLELDAEYYISKNLIPPLERIFNLVGA 1492
Query: 892 NASK---ELLSGDHTRSI--SISTPS-------NSGIMKFA----KRQLSCIGCKALIS- 934
N + E+ R +++TP+ N+ + K R SC C++ ++
Sbjct: 1493 NVRQWYDEMPKYQRMRRTEGALNTPAGRSGQDGNNSMFKKTLECYMRSSSCAVCRSKLNS 1552
Query: 935 ------NGTLCSHCKGREAEL-YCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTS 986
N +C+ C ++ L K +V E E L C+ C G +++ C S
Sbjct: 1553 EEQRQQNQAICNVCLRQQPHLSLLKLEYRVHESERRVANLQDVCRSCMGVGWGEEIKCDS 1612
Query: 987 RDCPIFYRRKKAQKDMAEAKLQLD 1010
+DCP+FY R + D+ + L+
Sbjct: 1613 KDCPVFYSRMRQASDLGHTRALLE 1636
>gi|360040946|ref|YP_004940081.1| UL54 gene product [Aotine herpesvirus 1]
gi|359832123|gb|AEV80760.1| DNA polymerase catalytic subunit [Aotine herpesvirus 1]
Length = 1037
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 178/540 (32%), Positives = 278/540 (51%), Gaps = 60/540 (11%)
Query: 401 KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISF 460
K+D+ + I N R + YC++DA L + L + + F + +AR+ + +
Sbjct: 472 KDDLSYKEIPVKFLANEAGRAVVGKYCVQDAVLVKDLFNIINFHYEAGAVARLAKISMRK 531
Query: 461 LLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAG--SEQGTYEGATVLEARAGFYEKPIATL 518
++ GQ I++ + LL + ++LV+P + G +E+ +Y+GATV E G+Y P+
Sbjct: 532 VIFDGQQIRIYTSLLDECACRDLVLPTYHRNGDAAEESSYQGATVFEPETGYYNDPVLVF 591
Query: 519 DFASLYPSIMMAYNLCYSTLVT-----PEDARKLNLPPECVNKTPSGETFVKSNLQKGIL 573
DFASLYPSI+MA+NLCYSTLV PE+ K+ + + + FVKS ++ +L
Sbjct: 592 DFASLYPSIIMAHNLCYSTLVMDGGECPEEEDKVY---KVSFENGTVYRFVKSEVRSSVL 648
Query: 574 PEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEI 633
E+L +A RK + ++E DPL++ +LD QLALK++ N+ YGFTG G LPC+ +
Sbjct: 649 SELLTRWVAQRKAVRETMRECTDPLKRTLLDKEQLALKVTCNAFYGFTGVANGMLPCLPV 708
Query: 634 SSSVTSYGRQMIEHTKKLVEDKFTTV--------------GGYEHNAEVIYGDTDSVMVQ 679
++S+T GR M++ T + + D F+T GG E A VIYGDTDSV V
Sbjct: 709 AASITRIGRGMLQDTARFIHDNFSTPDFLQTFFNAEDYVEGGVE--ARVIYGDTDSVFVC 766
Query: 680 FGVPTVEAAMKLGREAADYI-SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+ +A M A ++ S F P+KLEFEKV+ ++I KKRY G E
Sbjct: 767 YRGLKADALMASADRVAHHVTSRLFTHPVKLEFEKVFVSLMMICKKRYIG----KIEGAT 822
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI-PGAVQYVKSTISDLLMNRMDLSLL 797
+ KG++ VR+ +C VKN++ + L + D ++ AV KS++ L
Sbjct: 823 TLSMKGVDLVRKTSCEFVKNVIKDVLALLFDDAEVSAAAVSLHKSSVELLKRTGPPPGFQ 882
Query: 798 VITKGLTKTGDDYEVKAAHVE-------LAERMR-------------KRDAATA---PNV 834
I + L + D+ A HV+ L++ + KR AA + P V
Sbjct: 883 KILRRLNQARDELHTGAVHVDELVLSSVLSKDISLYKQPNLPHLSVIKRLAARSEELPAV 942
Query: 835 GDRVPYVII----KAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL 890
GDRV YV+ K YE +EDP+YV E+ +PI Y + Q+ K + + P+
Sbjct: 943 GDRVFYVLTANPASVRKKMSNYELAEDPLYVKEHQVPIHADKYFD-QVLKAITNVLSPVF 1001
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 131/302 (43%), Gaps = 45/302 (14%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA--NRN 173
S +IR FGV GHS+C V G YFY P+ R+RE +
Sbjct: 124 SGNVIRFFGVMDSGHSICVNVFGQLSYFYCEHPE--------------TDRLREVIYSVA 169
Query: 174 SKVPQ----FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASC-RGILDRGIQLDG 228
VP+ + + V K SI Y ++ ++ M + +LD+G
Sbjct: 170 ELVPEPRSPYAVTVLPVNKMSIYGYGTSCVPHLHRVSISNWVMAKKIGQYLLDQG----- 224
Query: 229 LGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR-KTAKTLSYCQLEFDCLYSDI 287
F YE V R ++D + W + KY +T +S C LE DC SD+
Sbjct: 225 -----FKVYEIKVDPLTRLVVDKKLTTFGWCF--LDKYEVRTRGRVSACDLELDCEVSDL 277
Query: 288 ISRHPEGEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFI-- 343
PE + +R LSFDIEC G FP E D VIQ++ + G + +
Sbjct: 278 FC-SPED--TSWPLYRCLSFDIECLSAGGGFPAAENVDDIVIQISCVCYGTGREDAGVCF 334
Query: 344 ----RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLI 399
+++ T+ SCAPI VDV F +E ++LL + F + ++ GYNI FD Y++
Sbjct: 335 GKSGKHLFTIGSCAPIEDVDVYEFPSEYELLLGFFLFFKRYGACLVTGYNINSFDFKYML 394
Query: 400 EK 401
+
Sbjct: 395 TR 396
>gi|345482629|ref|XP_001607949.2| PREDICTED: DNA polymerase zeta catalytic subunit [Nasonia
vitripennis]
Length = 2007
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 290/602 (48%), Gaps = 45/602 (7%)
Query: 435 QRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAG 492
RLL L I E AR+ G+ + SRG +V S +LR AK N V P+ Q G
Sbjct: 1398 HRLLHHLDIINRTSEHARLYGIQFYEVFSRGSQFRVESMMLRLAKPMNYIAVSPSAHQRG 1457
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV-------TPEDAR 545
+ ++E + Y P+ LDF SLYPSI++AYN C+ST + +P
Sbjct: 1458 CMRAPESLPLIMEPESTMYLDPVVVLDFQSLYPSIIIAYNYCFSTCLGRIEHIGSPHPFE 1517
Query: 546 --------KLNLPPECVNK---TPSGETFVKSNLQKGILPEILEELLAAR---KRAKADL 591
+ NL + NK P G FVKS++++GILP +L E+L R K+A D
Sbjct: 1518 FGATTLKVQKNLAKKLQNKMNFAPCGVAFVKSDVRRGILPRMLTEILETRLMVKKAIKDH 1577
Query: 592 KEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKK 650
+ L++A L RQL LK+ AN YG+T A G++PCIE+ SV S G++ +E K
Sbjct: 1578 SKEDRALQRA-LHSRQLGLKLIANVTYGYTAANFSGRMPCIEVGDSVVSKGKETLERAIK 1636
Query: 651 LVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLE 710
+VE E A V+YGDTDS+ + T E A +G E AD ++ KP+KL+
Sbjct: 1637 MVE------STPEWGARVVYGDTDSLFILLKGKTREEAFAIGAEMADAVTAANPKPVKLK 1690
Query: 711 FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
FEKV P +L +KKRY G + N KGIETVRRD C V ++ + L +
Sbjct: 1691 FEKVMQPCILQTKKRYCGYMYENLNDKPVYLAKGIETVRRDGCPAVAKILEKSLRILFDT 1750
Query: 771 RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDA 828
++ QYV + +L R + L K + Y+ A +EL +R+ ++D
Sbjct: 1751 NNMSMVKQYVTRQLDKVLSGRASIQDLTFAKEF-RGMKGYKAAACVPALELTKRLIQKDP 1809
Query: 829 ATAPNVGDRVPYVIIKAAKGAKAYERSEDPI-YVLENNIPIDTHYYLENQISKPLLRIFE 887
P G RVPY+I+ A P+ +L+ + + YY+ I PL R +
Sbjct: 1810 RAVPRTGARVPYIIVAGAPNEALIRCVRAPMELILDPGLRPNATYYVTKVIIPPLNRCLK 1869
Query: 888 PILKNASKELLSGDHTRSIS-ISTPSNSGIMKFAKRQLS-------CIGCKALISNGTLC 939
I +A + H ++++ + P+ + K +S C C G +C
Sbjct: 1870 LIGVDAYTWYMEMPHRQALNRLQGPALLNANRKQKTTISQYLCNATCPSCGQSCDRG-IC 1928
Query: 940 SHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQ 999
+ C +++ + ++ E ++ + C+ C G D CTS DCPIFYRR +AQ
Sbjct: 1929 AECVNNQSQTLVVLHEKCRQYERIYSNIKMLCESCIGVKDADS-CTSLDCPIFYRRSQAQ 1987
Query: 1000 KD 1001
+D
Sbjct: 1988 RD 1989
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 40/206 (19%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH-FHQILEGRMREANRNSKVP 177
++RIFG T+ G VC +HG PY Y+ + D +++ L+ + + ++K
Sbjct: 37 VLRIFGTTQNGEKVCLHIHGVFPYLYVPYSGQIKADILAYRLAAALDTAINISLGSAKA- 95
Query: 178 QFVRHIEMVQKRSIM--YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
+H+ V + S + Y +K+ F KI P M+ +L G LD + F
Sbjct: 96 -NTQHVYKVHQVSGIPFYGYHRKNHHFFKIYFYNPAMIKRATDLLQNGCILDQV----FQ 150
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA------------------------- 270
+E+++ F ++FMID NI G + I + K+R +A
Sbjct: 151 PHEAHIPFTMQFMIDYNIYGMSMINLRNVKHRHSATVSQTEEKLSNNSNNLSDFESEVKE 210
Query: 271 ------KTLSYCQLEFDCLYSDIISR 290
K S C+LE D SDI++R
Sbjct: 211 YLPYSVKKQSVCKLEIDAWASDILNR 236
>gi|322696805|gb|EFY88592.1| hypothetical protein MAC_05357 [Metarhizium acridum CQMa 102]
Length = 1677
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 202/672 (30%), Positives = 325/672 (48%), Gaps = 44/672 (6%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y + +L+ + H+S + S ++G +
Sbjct: 992 TGRHMINIWRAMRGELN---LLQYTLENVAW-HLLHRRVPHYSWRTLTSWYKSGKSSDLG 1047
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
++ Y + ++L+ I E AR+ GV + SRG KV S + R AK +
Sbjct: 1048 KVVRYYQTRTLMDIQILETNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1107
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ KQ GS+ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1108 NFILVSPSRKQVGSQNALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFL 1167
Query: 540 T-------------PEDARK---LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
E R+ L L + VN P+G +VK ++K +L ++L E+L
Sbjct: 1168 GRITNWRGVNKMGFAEYKRQEGLLALLKDHVNIAPNGMMYVKPEIRKSLLAKMLTEILET 1227
Query: 584 RKRAKADLKEAKD-PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K KD + + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1228 RVMVKSGMKSDKDDKVLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTG 1287
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + +V + AEV+YGDTDS+ V T + A +G E A I+
Sbjct: 1288 RETLERATAYIH----SVERW--GAEVVYGDTDSLFVYLKGRTRDQAFDVGNEIAKAITD 1341
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLV 760
+P+KL+FEKVY+P +L++KKRY G + + ++ + D KGIETVRRD + +
Sbjct: 1342 INPQPVKLKFEKVYHPCVLLAKKRYVGYKYESKDQVTPEFDAKGIETVRRDGTPAEQKIE 1401
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + D+ +Y + +L + + + + T D A +
Sbjct: 1402 EKALKLLFETADLSQIKEYFQKQCDKILRGAVSVQDFCFAREVRLGTYSDKGPPPAGALI 1461
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
+ + DA P G+RVPYV+I A GA+ +RS P +L N + +D YY+ +
Sbjct: 1462 STKKMLEDARAEPQYGERVPYVVITGAPGARLIDRSVAPEDLLANPHWQLDAEYYISKNL 1521
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFA----KRQLSCIGCKALIS 934
PL RIF + N + + I P+ G K R C+ C A +
Sbjct: 1522 IPPLERIFNLVGANVRQWYDEMPKVQRIR-RAPNEPGAKKMTLESYMRSTHCLVCSAKFA 1580
Query: 935 N--GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPI 991
LC C+ +++ E + + + C+ C G S +DV C S+DCP+
Sbjct: 1581 QEGQALCPACRDNAPASLFMLQTRLATEERGYQDVLSVCRTCSGLSPLEDVRCDSKDCPV 1640
Query: 992 FYRRKKAQKDMA 1003
F+ R K + +A
Sbjct: 1641 FWTRMKQRTKVA 1652
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF----HQILEGRMREANRNS 174
++RIFG T G VC VHG PY Y+ + PD++ + H ++ + + R
Sbjct: 28 VVRIFGSTETGQKVCAHVHGAFPYLYVEYNGDLAPDEVGAYIYRLHLSIDHALAVSYRRD 87
Query: 175 KV---PQFVRHIEMVQKRSIMYYQ-QQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
+ +FV I +V + I +Y + FLKI + P ++ +L +G+ +
Sbjct: 88 QYGENAKFVARITLV--KGIPFYGFHVGYRFFLKIYMFNPIVMTRLADLLQQGVIMK--- 142
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ F YE+++ + L+FM+D N+ G +++E +R
Sbjct: 143 -RKFQPYEAHLQYLLQFMVDYNLYGCDYLESSKTAFR 178
>gi|242813002|ref|XP_002486077.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
stipitatus ATCC 10500]
gi|218714416|gb|EED13839.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1672
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 188/616 (30%), Positives = 298/616 (48%), Gaps = 51/616 (8%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN--L 483
Y L L +LD I E AR+ GV + SRG KV S + R AK +N L
Sbjct: 1035 YYLSRVQLDLEILDTNELIPRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKPENFML 1094
Query: 484 VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPED 543
V P+ KQ G + V+E ++ FY P+ LDF SLYPSI++AYN CYST + D
Sbjct: 1095 VTPSRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIIIAYNYCYSTFLGRLD 1154
Query: 544 ----------------ARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
R L L + VN P+G + K ++K +L +L E+L R
Sbjct: 1155 NWRGRGKMGFMEYERQERILELLKDHVNIAPNGMIYAKPEIRKSLLARMLSEILETRVMV 1214
Query: 588 KADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K+ +K KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +
Sbjct: 1215 KSGMKADKDDKTLQQLLNHRQLALKMIANVTYGYTSASFSGRMPCSEIADSIVQTARETL 1274
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E T + +V + +AEV+YGDTDS+ + T + A +G E + ++ +
Sbjct: 1275 ERTIAFIH----SVDQW--DAEVVYGDTDSLFISLKGRTRDEAFTIGEEISKAVTKMNPR 1328
Query: 706 PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEK+Y+P +L++KKRY G + + ++ + + D KGIETVRRD + + + L
Sbjct: 1329 PVKLKFEKLYHPCVLLAKKRYVGFKYEHRDQVEPEFDAKGIETVRRDGTPAEQKIEEKAL 1388
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERM 823
+ D+ Y + ++ R+ + + + T + A ++ +
Sbjct: 1389 KILFRTADLSRVKSYFQKQCLKIMQGRISVQDFCFAREVRLGTYSEKGTLPAGALISTKK 1448
Query: 824 RKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPL 882
D P G+RVPYV++ A GA+ +R P +L N ++ +D YY+ + PL
Sbjct: 1449 MLEDPRLEPQYGERVPYVVVTGAPGARLIDRCVAPEVLLNNAHLELDAEYYITKNLIPPL 1508
Query: 883 LRIFEPILKNASK-----------ELLSGDHTRSISISTPSNSGIMK-----FAKRQLSC 926
RIF + N + + G T + SN+ I K + K + C
Sbjct: 1509 ERIFNLVGANVRQWYDEMPKIQRIRRIEGAFTGQGDNNNSSNTTISKKTLESYMKSSI-C 1567
Query: 927 IGCKALISNGT----LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQ-GSLHQD 981
+ CK +++ LC++C + K SQ+Q+ E L C+ C D
Sbjct: 1568 LICKNKLTDKNSDLPLCNNCTSQSHVSLFKLTSQLQQAERRTSNLLKICRSCMVVPFGDD 1627
Query: 982 VLCTSRDCPIFYRRKK 997
V+C S+DCP+FY R +
Sbjct: 1628 VICDSKDCPVFYSRTR 1643
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 47/230 (20%)
Query: 98 IDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS 157
+ + G S R P +IR FG T G VC +HG PY YI G+G D+++
Sbjct: 25 VPFAAGASQRTARP----KVPVIRAFGATETGQKVCVHIHGAFPYLYIEYRGGLGQDEVN 80
Query: 158 ----HFHQILEGRMREANRNSKVP---QFVRHIEMVQKRSIMYYQQQKS-QPFLKIVVAL 209
+ H+ ++ + + R++ +V HI +V + I +Y + +LKI +
Sbjct: 81 DAIRNLHKSIDHALANSYRHNAYDGRVAYVAHISLV--KGIPFYGYHVGYRYYLKIYLLN 138
Query: 210 PTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRK- 268
P + +L +G + YES++ F ++M D N+ G +++ K+R
Sbjct: 139 PLNIIRLADLLRQG----AVMKYPLQPYESHLQFIPQWMCDYNLYGCAYMDCAKAKFRSP 194
Query: 269 ------------------------TAKTL----SYCQLEFDCLYSDIISR 290
T++ + S+C LE D DI++R
Sbjct: 195 VPEYLELSNLDHRWHDRTIPPEYITSEAVLPKQSHCTLEVDVCVQDILNR 244
>gi|242006490|ref|XP_002424083.1| DNA polymerase zeta catalytic subunit, putative [Pediculus humanus
corporis]
gi|212507389|gb|EEB11345.1| DNA polymerase zeta catalytic subunit, putative [Pediculus humanus
corporis]
Length = 2605
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 306/616 (49%), Gaps = 69/616 (11%)
Query: 435 QRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAG 492
++L +L F+ E AR+ G+ +LSRG +V S +LR AK N V P+V Q
Sbjct: 1999 NKILKQLDFVNRTSEFARLFGIQFYEVLSRGSQFRVESMMLRLAKPLNYIPVSPSVSQRA 2058
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL-------------- 538
S + +LE + FY P+ LDF SLYPS+++AYN C+ST
Sbjct: 2059 SMRAPASLPLILEPESIFYTDPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEKLGGREPFE 2118
Query: 539 -------VTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADL 591
++PE+ ++L ++ +P+G FVK +++KGILP +L+E+L R K +
Sbjct: 2119 FGCTQLQISPEELKRLE---NDISISPAGVAFVKGSVRKGILPTMLQEILETRLIVKKSM 2175
Query: 592 KEAKDP-LEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTK 649
KE KD + + VL +QL LK+ AN YG+T A G++P IE+ SV S GR+ +
Sbjct: 2176 KENKDNRILQKVLHAQQLGLKLIANVTYGYTAANFSGRMPSIEVGDSVVSKGRETLHRAI 2235
Query: 650 KLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKL 709
++V++ + NA+V+YGDTDS+ V + E A K+G E A+ ++ KP+KL
Sbjct: 2236 QMVKN------NKKWNAKVVYGDTDSIFVLTPGRSREEAFKIGAEIAEAVTRDNPKPVKL 2289
Query: 710 EFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTECLHKIL 768
+ EK+Y P +L +KKRY G + +P++ + + KGIETVRRD C V ++ + L +
Sbjct: 2290 KLEKIYQPSILQTKKRYVGYMYESPDQEKPIFEAKGIETVRRDGCPAVGKILRKALQILF 2349
Query: 769 VDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERMRKRD 827
RD+ +Y S L R ++ L+ K + G ++LA++ + D
Sbjct: 2350 DTRDVSLVKKYTIRQFSKLFQGRTNVQDLIFAKEYRGRHGYRPGACVPALQLAKQWTRLD 2409
Query: 828 AATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIF 886
P V +RVPYVI+ G + P ++ + ++ ++ YY+ I PL R
Sbjct: 2410 KRAEPRVKERVPYVIVNGPPGVPLIKLVRSPKELISDPSLRLNAVYYITKAIIPPLHRCL 2469
Query: 887 ------------EPILKNASKELLSG-------DHTRSISISTPSNSGIMKFAKRQLSCI 927
E K KE+ S ++ R+IS P+ + CI
Sbjct: 2470 SLTGVDVATWYAEMPKKKIMKEIKSNVFEDGVIENRRTISQYFPA-----------IECI 2518
Query: 928 GCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSR 987
CK I+N +C C+ + + +++ E +G + CQ C ++ + C S
Sbjct: 2519 LCKE-ITNAPVCQKCQNDCQKTTVGIIKKIRSWEKSYGDIVKVCQSCCSNV-TEFNCQSL 2576
Query: 988 DCPIFYRRKKAQKDMA 1003
DCPI YRR + +D++
Sbjct: 2577 DCPILYRRIQTFRDLS 2592
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPD-DISHFHQILEGRMREANRNSKVP 177
+IRIFG T +G C VHG PY Y+ G PD D + L+ ++ SK
Sbjct: 36 VIRIFGSTPDGVKSCVHVHGVYPYIYVPYIGGENPDRDALLLYAALDETLKITFSQSKT- 94
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
+FV + +V Y Q F KI + P + +L +G LG K +
Sbjct: 95 KFVYKVTVVSGIPFYGYHASHHQ-FFKIFLYNPFYIKKASDLLLKGAI---LGQK-LQPH 149
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYRK---------------------TAKTLSYC 276
ES++ + L+FM+D NI G +++ KYR+ T T SY
Sbjct: 150 ESHIPYTLQFMMDYNIYGMSFVNFSKVKYRRNPEKPDSLEGIDQTLVLSEKITKNTCSY- 208
Query: 277 QLEFDCLYSDIISRHPE 293
E D SDII+ + E
Sbjct: 209 -FELDVFASDIINANNE 224
>gi|389568573|gb|AFK85010.1| DNA polymerase [Rhinolophus ferrumequinum herpesvirus 1]
Length = 1014
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 188/537 (35%), Positives = 275/537 (51%), Gaps = 54/537 (10%)
Query: 401 KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISF 460
KED+ + I N+ R R+ YC++DA L L L F E+AR+ + I
Sbjct: 453 KEDMPYREIPREFVSNSFGRSRVGKYCVQDATLVMDLFITLNFHIEIAEIARLAHIVIRR 512
Query: 461 LLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT---YEGATVLEARAGFYEKPIAT 517
+ GQ +++S +L KAK + +++P + G Y+GATVL+ G+Y P+
Sbjct: 513 AIFDGQQKRIISCILHKAKDRRMIVPYIAPQTGPDGRDVGYKGATVLDPDVGYYASPVVV 572
Query: 518 LDFASLYPSIMMAYNLCYSTLV-TPEDARKLNLPPECVNKTPSGE-TFVKSNLQKGILPE 575
DFASLYPSIMMA+NLCYSTLV + R L+ E T+VK++++K IL +
Sbjct: 573 FDFASLYPSIMMAHNLCYSTLVFDTQRVRHLSGDDTFTVGVNGIEYTYVKAHVRKSILSD 632
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L E LA RKR KA ++ DP K +LD +Q ALK++ N+VYG TGA G LPC+ I+S
Sbjct: 633 LLTEWLAERKRVKAAMEVCTDPRMKLILDKKQWALKVTCNAVYGVTGAMHGMLPCLAIAS 692
Query: 636 SVTSYGRQMI----------EHTKKLVEDKFTTVG---GYEHNAEVIYGDTDSVMVQFGV 682
SVT GR+M+ +K+ +D+F E VIYGDTDSV
Sbjct: 693 SVTYLGREMLCATTRYINTEMQSKEFFKDRFGLSDEDFTGELRVRVIYGDTDSVFQLTEN 752
Query: 683 PTVEAAMKLGREAADYIS-GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
E + A +I+ F PIKLEFEK+ P +LI KKRY G + K+
Sbjct: 753 IKKETLQDIAPRIAKHITEALFTPPIKLEFEKILCPLMLICKKRYVGRSGES-----KLV 807
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDI---------------------PGAVQYV 780
KG+E VR+ +C VK +V + + + D D+ PG + V
Sbjct: 808 MKGVELVRKTSCEFVKTVVKDVVDMLFWDVDVQMAAVALSNASLRDVYRDGVPPGMQKVV 867
Query: 781 KSTI---SDLLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPNVGD 836
+ DL +NR+D+ L ++ L++ Y + AH+ + R+ +R P+VGD
Sbjct: 868 RRLCVAKDDLFLNRVDVRELTLSSVLSRDVSSYKQPNLAHLHVVRRLAER-GDELPHVGD 926
Query: 837 RVPYVII---KAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPIL 890
R+ YVI+ AKG YE +EDP YV ++ IP+ Y + Q K + + PI
Sbjct: 927 RISYVIVAPKTTAKGIPNYELAEDPAYVAQHQIPMHAEKYFD-QTVKAVANLIAPIF 982
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 129/286 (45%), Gaps = 27/286 (9%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
S +I++FG T G C V G YFY C DD+ + + ++ R N++
Sbjct: 112 SGTVIKLFGKTESGAKCCVNVFGQHQYFYCEC------DDVKNLYSVIN---RHITSNAE 162
Query: 176 VPQFVRH-IEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
+ + IE K SI Y +K+ A + +L DG M
Sbjct: 163 IKMGSSYSIESATKYSIYGYNTDPVPDLVKVSFANHYVAKKVAKLL----LADGYKM--- 215
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEG 294
YE++V +RF ID W + R+ KT S +LE DCL SD++
Sbjct: 216 --YETDVDILMRFFIDNEFPSFGWYRLQRNHVREHNKT-SNVELEIDCLLSDLVPL---- 268
Query: 295 EFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSC 352
E + + SFDIEC G+FP E +D VIQ++ + + ++ TL SC
Sbjct: 269 EDNSWPNYDCYSFDIECMSPDGNFPKAENMNDIVIQIS-VACFETGGPLKTYHLFTLGSC 327
Query: 353 APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYL 398
PI GV + F E D+L+ + F++ P+++ GYNI FDL Y+
Sbjct: 328 DPIDGVHIYEFPCEYDLLMGFCIFLKIGSPEILTGYNINNFDLQYI 373
>gi|242046854|ref|XP_002461173.1| hypothetical protein SORBIDRAFT_02g042330 [Sorghum bicolor]
gi|241924550|gb|EER97694.1| hypothetical protein SORBIDRAFT_02g042330 [Sorghum bicolor]
Length = 1714
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 193/649 (29%), Positives = 305/649 (46%), Gaps = 72/649 (11%)
Query: 415 GNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQL 474
G R R Y + ++++L + E+ARV G+ +LSRG +V S L
Sbjct: 1059 GPGRGRHRCIEYISNRTRINLEIMNQLDLVNRTSELARVFGIDFFSVLSRGSQYRVESML 1118
Query: 475 LRKAKQKNL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYN 532
LR A +N + P +Q S+ V+E + FY P+ LDF SLYPS+++AYN
Sbjct: 1119 LRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESAFYPDPVVVLDFQSLYPSMIIAYN 1178
Query: 533 LCYSTL---VTPEDARKLNLPPECVNK------------TPSGETFVKSNLQKGILPEIL 577
LCYST V P + L + + TP+G +V+ ++KG+LP +L
Sbjct: 1179 LCYSTCLGKVFPSKSNVLGVSSYSADPHTLVDLKNQLLLTPNGVLYVQPKIRKGVLPRLL 1238
Query: 578 EELLAAR---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEI 633
EE+L+ R K+A L ++ L + + + RQLALK+ AN YG+T A G++PC E+
Sbjct: 1239 EEILSTRIMVKQAMKKLSPSQQVLHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAEL 1297
Query: 634 SSSVTSYGRQMIEHTKKLVEDKFTTVGGYEH---NAEVIYGDTDSVMVQFGVPTVEAAMK 690
+ S+ GR+ +E V +H A V+YGDTDS+ V + E A +
Sbjct: 1298 ADSIVQCGRRTLETAISFVN---------QHPLWKARVVYGDTDSMFVLLKGRSREEAFR 1348
Query: 691 LGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVR 749
+G+E A I+ P+ L+FEKVY P L++KKRY G + +PE+ + + D KGIETVR
Sbjct: 1349 IGKEIASSITAMNPDPVTLKFEKVYQPCFLLTKKRYVGYSYESPEQNEPIFDAKGIETVR 1408
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD C V ++ + + ++D+ Y++ + +L ++ + + K + + G
Sbjct: 1409 RDTCPAVAKILERSIRTMFEEQDLTKVRTYLERQWTRILSGKVSIQDFIFAKEV-RLG-T 1466
Query: 810 YEVKAAHVE----LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 865
Y +A+ + +A + D P +RVPYV+I GA+ + DP +LEN
Sbjct: 1467 YSARASTLPPAAIVATKAMLSDPRAEPRYAERVPYVVIHGEPGARLADMVIDPYGLLENG 1526
Query: 866 IP--IDTHYYLENQISKPLLRIF------------------EPILKNASKELLSGDHTRS 905
P ++ YY+ QI L R+F P L G +R
Sbjct: 1527 SPYRLNEQYYITKQIIPALQRVFGLLGADLNKWFNEMPRPIRPTLAKRQSAAGHGSFSRD 1586
Query: 906 IS-ISTPSNSGIMKFAKR------QLSCIGCKALISNG-TLCSHCKGREAELYCKTVSQV 957
S I N+ + A R C C +I T C++C EA + +
Sbjct: 1587 GSFIRLGLNNKALGKAGRIDTYYMSSHCSICGDIIQGTETFCNNCLKNEAVVATIVAGRT 1646
Query: 958 QELEVLFGRLWTQCQECQGS---LHQDVLCTSRDCPIFYRRKKAQKDMA 1003
+LE L C C G+ + + C S CP+FY R+K Q+++
Sbjct: 1647 SKLEREIQHLAAICGHCGGADWIIESGIKCVSLACPVFYERRKVQRELG 1695
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR--EANRNSKV 176
++RI+G T G C +H PYFYI CP+ + D++ + G + E ++
Sbjct: 54 VVRIYGSTPAGQKTCLHIHRVLPYFYIPCPEEL-LDNLEKGDSYITGLLSALEKALQARG 112
Query: 177 PQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVA-LPTMVASCRGILDRGIQLDGLGMKSFM 235
P +H+ + + F +V P V+ ++ G + ++F
Sbjct: 113 PSKRKHVHGSLNGKSYCEKVHYAIDFFDLVSRYYPHEVSRAASLVLSG----AVSNRAFQ 168
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
YES++ + L F++D N+ G I V K+R
Sbjct: 169 PYESHIPYLLHFLVDYNLYGMGHIHVKDFKFR 200
>gi|429862842|gb|ELA37449.1| DNA polymerase zeta catalytic subunit [Colletotrichum gloeosporioides
Nara gc5]
Length = 1719
Score = 266 bits (680), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 192/621 (30%), Positives = 295/621 (47%), Gaps = 40/621 (6%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
+L Y L + ++L+ I E AR+ GV + SRG KV S + R AK +
Sbjct: 1090 KLLRYYLARTRIDIQILESNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1149
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ KQ G + V+E ++ FY P+ LDF SLYPS+M+AYNLCYST +
Sbjct: 1150 NFMLVSPSRKQVGGQNALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNLCYSTFL 1209
Query: 540 T----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
R L L + +N TP+G +V+ ++K +L ++L E+L
Sbjct: 1210 GRIVNWRGMNKMGFTEYQRHKRLLELLKDHINITPNGMMYVRPEIRKSLLAKMLGEILET 1269
Query: 584 RKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1270 RVMVKSGMKQDKDDKTLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTG 1329
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + + AEV+YGDTDS+ V T + A +G E A I+
Sbjct: 1330 RETLERAIAFIHSQ------ERWGAEVVYGDTDSLFVYLKGRTKDQAFDIGNEIAKAITD 1383
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLV 760
+PIKL+FEKVY+P +L++KKRY G + + + D KGIETVRRD + +
Sbjct: 1384 MNPRPIKLKFEKVYHPCVLLAKKRYVGYKYESKNQVKPDFDAKGIETVRRDGTPAEQKIE 1443
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + ++ Y + ++ + + + + T D +
Sbjct: 1444 EQALKILFETANLSEVKSYFQKQCEKIMRGSVSVQDFCYAREVKLGTYSDKGPPPPGALI 1503
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
+ + DA P G+RVPYV+I A GA+ +R P +L++ + +D YY+ +
Sbjct: 1504 STKRMLEDARAEPQYGERVPYVVITGAPGARLIDRCVAPEDLLKDLHSQLDAEYYISKNL 1563
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQL-------SCIGCKA 931
PL RIF + N + + I + G M AK+ L SCI C A
Sbjct: 1564 IPPLERIFNLVGANVRQWYDDMPKVQRIRRVDQTLGGGM--AKKTLESYLKSASCISCNA 1621
Query: 932 LIS-NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDC 989
+ G LC C+ +++ E + + C+ C G DV C S+DC
Sbjct: 1622 KMQVEGVLCPKCEQDAPSSLFNLQTRLNHEERKYMEVVRICRSCSGLPAADDVPCDSKDC 1681
Query: 990 PIFYRRKKAQKDMAEAKLQLD 1010
P+FY R K + K LD
Sbjct: 1682 PVFYSRVKQSTRLKTEKSALD 1702
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 50/229 (21%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF----HQILEGRMREANRNS 174
++R+FG T G VC +HG PY Y+ + P+D+ + H ++ + + R
Sbjct: 42 VVRVFGSTETGQKVCAHIHGAFPYLYVEYQGSLEPEDVGAYIYRLHLSIDHALAVSYRRD 101
Query: 175 KV---PQFVRHIEMVQKRSIMYYQ-QQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
+ +FV I +V + I +Y + FLKI + P ++ +L +G+ L
Sbjct: 102 QYADNAKFVARITLV--KGIPFYGFHVGYRFFLKIYMFNPIVMTRLADLLQQGVILK--- 156
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEV-------PVGKYRKTAKT----------- 272
K F YE+++ + L+FM D N+ G +++ P+ Y +
Sbjct: 157 -KKFQPYEAHLQYLLQFMTDYNLYGCGYLDASDVFFRGPIPSYDVEGNSQHLWHDHSIPR 215
Query: 273 -----------LSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIE 310
+S+C +E D +II+R +M R L D E
Sbjct: 216 GRVLEDLSLPRVSHCSVEVDICVQNIINR-------RMVKERRLHHDFE 257
>gi|443899578|dbj|GAC76909.1| DNA polymerase zeta, catalytic subunit [Pseudozyma antarctica T-34]
Length = 1665
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 202/691 (29%), Positives = 323/691 (46%), Gaps = 56/691 (8%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLA 424
T R L WR E+ ++ N+C L + K H ++ +G AE RR
Sbjct: 950 TGRHTLNLWRLMKGELTLNLYTLENVCYHLLHRRVPKFS-HQTLTEWYTSGRAELVRRAL 1008
Query: 425 VYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV 484
+Y ++ L ++ + F+ E AR+ G+ ++SRG KV S +LR AK +N V
Sbjct: 1009 LYYVEMVELELEIIAESEFVLRTAEFARIYGIDFFSVISRGSQFKVESIMLRIAKPENFV 1068
Query: 485 I--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----L 538
+ P+ Q G + ++E ++ FY+ P+ LDF SLYPSIM+AYNLCYST +
Sbjct: 1069 LISPSRAQVGKQNAAECLPLIMEPQSAFYKGPLIVLDFQSLYPSIMIAYNLCYSTCLGRV 1128
Query: 539 VTPEDARKLNL----PPEC--------VNKTPSGETFVKSNLQKGILPEILEELLAARKR 586
+ KL + PP+ VN + +G FVK ++K +L ++L E+L R
Sbjct: 1129 AGFKGTSKLGVTDYAPPKGLLSLLQDDVNISSNGLLFVKPRVRKSLLAKMLSEILDTRVM 1188
Query: 587 AKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQM 644
KA +K K D + + + RQL+LK+ AN YG+T A+ G++PC+EI+ ++ GR+
Sbjct: 1189 VKASMKGTKADKSFQRIQNARQLSLKLLANVTYGYTSASFSGRMPCVEIADAIVQTGRET 1248
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
+E L+ G E A+V+YGDTDS+ V T E A +LG AD ++
Sbjct: 1249 LEKAMDLIN------GTEEWGAQVVYGDTDSLFVYLPGRTKEEAFRLGHLIADKVTSLNP 1302
Query: 705 KPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTEC 763
+P+KL+FEKVY P +L++KKRY G Y T E+ D KGIETVRRD ++ ++ C
Sbjct: 1303 RPVKLKFEKVYLPSVLLAKKRYVGFKYETLDEREPGFDAKGIETVRRDFHPAIQRMLEAC 1362
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAER 822
+ + RD+ Y++ +L R+ + K + + D ++ R
Sbjct: 1363 IPLLFRTRDLSRVKSYLQRQWRKILEGRVSPQDFIFAKEVRLGSYSDKVAPPPGAAVSSR 1422
Query: 823 MRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKP 881
D + P G+RVPY+I + AK +++ P L+N + I+ YY+ I P
Sbjct: 1423 RMLADPRSEPQYGERVPYIISQGEPRAKLNQQAVSPEAFLKNPQLQINALYYITRTIIPP 1482
Query: 882 LLRIFE-------------PILKNA------SKELLSG---DHTRSISISTPSNSGIMKF 919
L R+F P NA + LL+ + S + PS G
Sbjct: 1483 LARVFNLLGADVEAWFHEMPKPTNAYWNKRPTAALLAAITSSDSASTDTAGPSTVGNATL 1542
Query: 920 AKRQL--SCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQEC-QG 976
+C+ C + +C+ C+ +++ L+ + C C
Sbjct: 1543 NSHYATETCLLCSTR-TEALICADCRQTPTTSLHAVATKLHNLQAQTRAVDRICSTCAHF 1601
Query: 977 SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKL 1007
V C S DCP Y++ K ++ + L
Sbjct: 1602 ERPTSVECVSLDCPYTYQKTKLNNNLEDTAL 1632
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-----NRN 173
++RIFG T G VC VH PY YI + PDD+ + L + A RN
Sbjct: 68 VLRIFGATPAGQRVCIHVHNVFPYCYIQYKGSLDPDDVLRYIHRLGRELNAAMAASLRRN 127
Query: 174 SKVP---QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
+ P QF+ I + + + Y S FLKI P+ IL+ G G+
Sbjct: 128 AADPEANQFIAAIHLCKGINFYGYHVGYSY-FLKISFVDPSHSYRIATILESG----GVM 182
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F +E ++ + L+FM+D NI G +++++ ++R
Sbjct: 183 KTIFQPFEIHIRYQLQFMLDYNIFGCDYLDLDDVRFR 219
>gi|449551085|gb|EMD42049.1| hypothetical protein CERSUDRAFT_90650 [Ceriporiopsis subvermispora B]
Length = 1717
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 191/596 (32%), Positives = 293/596 (49%), Gaps = 51/596 (8%)
Query: 448 VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSEQGTYEGATVLE 505
E AR+ GV +LSRG KV S + R AK ++ V+ P+ + G + ++E
Sbjct: 1069 AEFARIFGVDFFSVLSRGSQFKVESFMFRIAKPESFVLLSPSKQDVGKQNAAECMPLIME 1128
Query: 506 ARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARK---------LNLPP----- 551
+ FY P+ LDF SLYPSIM+AYN CYST + K L LPP
Sbjct: 1129 PLSAFYSSPLVVLDFQSLYPSIMIAYNYCYSTCLGRVTDFKGQYKFGVTDLRLPPGLLDT 1188
Query: 552 --ECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK-DPLEKAVLDGRQL 608
+ +N +G +VK ++KG+L +L ELL R K +K K D K VL+ RQL
Sbjct: 1189 LKDHINVAANGIMYVKPEVRKGLLGRMLTELLDTRVMVKQAMKGVKEDKGLKRVLEARQL 1248
Query: 609 ALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAE 667
ALK AN YG+T AT G++P +EI+ S+ GR+ +E ++++ + A+
Sbjct: 1249 ALKFIANVTYGYTSATYSGRMPAVEIADSIVQSGRETLEKAVRVIDST------KKWGAK 1302
Query: 668 VIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYA 727
V+YGDTDS+ + T E A ++G++ AD I+ PIKL+FEKVY P +L++KKRY
Sbjct: 1303 VVYGDTDSLFIYLRGKTKEQAFRIGQDMADTITAMHPAPIKLKFEKVYLPCVLLAKKRYV 1362
Query: 728 GLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD 786
G + NP++ + D KGIETVRRD + +V CL + +D+ +Y + S
Sbjct: 1363 GFKYENPDEVEPSFDAKGIETVRRDGVPAQQKMVETCLKILFRTQDLSMVKEYCYQSWSR 1422
Query: 787 LLMNRMDLSLLVITKGL-TKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKA 845
+L NR+ + + K + T D V +A R D P GDRVPYVI++
Sbjct: 1423 ILENRVSIQDFIFAKEVKMGTYSDKGPPPPGVAVAARHMLEDPNYEPQYGDRVPYVIVRG 1482
Query: 846 AKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNASKEL------L 898
G++ +R+ P +L+N + +D YY+ + PL R+F I + L
Sbjct: 1483 DPGSRLVDRAVAPEVLLDNPHKHLDAMYYISRVLIPPLERVFNLIGADVRAWFDGMPRAL 1542
Query: 899 SGDHTRSISISTPSNS------GIMKFAKRQLS-------CIGCKALIS-NGTLCSHCKG 944
D SI +S P S + ++ ++ C+ C++ + +C C
Sbjct: 1543 RADVPDSIMMS-PRKSPKKQQKDVADYSPFKIDEHFGSSRCMLCESFTDIDEPICEICLM 1601
Query: 945 REAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD-VLCTSRDCPIFYRRKKAQ 999
+S+++ E + C C G+ + V C S DCP + RKKA+
Sbjct: 1602 DPQVAITGLLSRLKVTEDRLKDVQAVCSSCCGTAQAEPVHCESLDCPWLFERKKAE 1657
>gi|302919112|ref|XP_003052793.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733733|gb|EEU47080.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1682
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 199/666 (29%), Positives = 320/666 (48%), Gaps = 45/666 (6%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y + + +L+ + H+S + S ++G
Sbjct: 999 TGRHMINVWRAMRGELN---LLQYTMENV-VWHLLHRRIPHYSWKSLTSWYKSGKHRELG 1054
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R+ Y L +L+ I E AR+ GV + SRG KV S + R AK +
Sbjct: 1055 RMLRYYQNRTRLDIEILEANELIARTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1114
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ KQ G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1115 NFLLVSPSRKQVGGQNALECLPLVMEPQSAFYNSPLVVLDFQSLYPSVMIAYNYCYSTFL 1174
Query: 540 TP-EDARKLN---------------LPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
+ R +N L + +N P+G + K+ ++K +L ++L E+L
Sbjct: 1175 GRITNWRGMNKMGFTEYKRQQGLLALLEDYINIAPNGMMYAKTEIRKSLLAKMLTEILET 1234
Query: 584 RKRAKADLKEAKD-PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K+ KD + + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1235 RVMVKSGMKQDKDDKVLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTG 1294
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + +V + AEV+YGDTDS+ + T E A +G E A I+
Sbjct: 1295 RETLERAIAYIH----SVEKW--GAEVVYGDTDSLFIYMKGRTREQAFDIGNEIAKAITE 1348
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLV 760
+PIKL+FEKVY+P +L++KKRY G Y + + + D KGIETVRRD + +
Sbjct: 1349 MNPRPIKLKFEKVYHPCVLLAKKRYVGYKYESKDQTKPEFDAKGIETVRRDGTPAEQKIE 1408
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKG--LTKTGDDYEVKAAHVE 818
+ L + D+ Y + ++ N + + K L D A +
Sbjct: 1409 EKALRLLFETADLSQIKAYFQKQCQKIMRNNVSVQDFCFAKEVRLGTYSDKGPAPAGALI 1468
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQ 877
+RM + DA P G+RVPYV+I A GA+ +R P +L N + +D YY+
Sbjct: 1469 STKRMLE-DARAEPQYGERVPYVVITGAPGARLIDRCVAPEELLSNPHWQLDAEYYISKN 1527
Query: 878 ISKPLLRIFEPILKNASK---ELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALIS 934
+ PL RIF + N + E+ R + + + + K C+ C +
Sbjct: 1528 LIPPLERIFNLVGANVRQWYDEMPKVQRIRHATTLGTRKTTLESYMKSS-HCLICDKKFA 1586
Query: 935 N--GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPI 991
N +LC C+ +++ E + + C+ C G +DV C S+DCP+
Sbjct: 1587 NEDNSLCPTCRTNVPASLLTLQTRLSTEERRLQEVLSLCRSCAGIGPVEDVQCDSKDCPV 1646
Query: 992 FYRRKK 997
F+ R +
Sbjct: 1647 FWTRMR 1652
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 41/208 (19%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS----HFHQILEGRMREANRNS 174
++RIFG T G VC VHG PY Y+ + PD++ FH ++ + + R
Sbjct: 42 VVRIFGSTETGQKVCAHVHGAFPYLYVEYQGSLAPDEVGAYIYRFHLSIDHALAVSYRRD 101
Query: 175 KV---PQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
K +FV I +V K Y + FLKI + P ++ +L +G+ +
Sbjct: 102 KKGDNARFVARITLV-KGVPFYGFHVGYRFFLKIYMFNPVVMTRLADLLQQGVIMK---- 156
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRK----------------------- 268
+ F YE+++ + L+FM D N+ G ++++ ++R
Sbjct: 157 QKFQPYEAHLQYLLQFMTDFNLYGCDYLDASSTRFRSPVPEYDQGLNSTHLWHTRSIPEG 216
Query: 269 ------TAKTLSYCQLEFDCLYSDIISR 290
T S+C +E D DII+R
Sbjct: 217 YITDETTLPRASHCSIEVDICVQDIINR 244
>gi|225685289|gb|EEH23573.1| DNA polymerase delta catalytic subunit [Paracoccidioides brasiliensis
Pb03]
Length = 1707
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 203/678 (29%), Positives = 327/678 (48%), Gaps = 58/678 (8%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRR-- 422
T R ++ WR E++ ++ Y I ++ + + + + H DL R R
Sbjct: 1017 TGRHMINLWRAMRGELN---LLQYTI--ENVAFHLLHQRIPHYHYQDLTKWFQSQRPRDI 1071
Query: 423 --LAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
+ Y L +++D I E AR+ GV + SRG KV S + R AK
Sbjct: 1072 AKVINYFASRVQLNLKIIDSNELISRTSEQARILGVDFFSVFSRGSQFKVESLMFRIAKP 1131
Query: 481 KNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
+NL++ P KQ G + V+E ++ FY P+ LDF SLYPSIM+AYN CYST
Sbjct: 1132 ENLILISPGRKQVGQQNALECLPLVMEPQSDFYTSPVLVLDFQSLYPSIMIAYNYCYSTC 1191
Query: 539 VTPE------------DARK----LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLA 582
+ D R+ L L + +N +P+G +VK ++K +L ++L E+L
Sbjct: 1192 LGRVVEWRGQNKLGFIDFRRPAGLLELFKDQINISPNGMIYVKQEIRKSLLAKMLIEILE 1251
Query: 583 ARKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K +K KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1252 TRVMVKGGMKAWKDDKSLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQT 1311
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
R+ +E ++ +V + NAEV+YGDTDSV V T + A +G E A I+
Sbjct: 1312 ARETLEKAIAMIH----SVERW--NAEVVYGDTDSVFVCLKGRTKDEAFDIGEEIAKTIT 1365
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKNL 759
+ +PIKL+FEKVY+P +L++KKRY G + N +K + D KGIETVRRD + +
Sbjct: 1366 NSNPRPIKLKFEKVYHPCVLLAKKRYVGYKYENRSQKEPEFDAKGIETVRRDGTPAEQKI 1425
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVE 818
+ L + D+ Y + + ++ ++ + K + T D +
Sbjct: 1426 EEKVLRILFETADLSRVKSYFQKQCTKIMKGKVSIQDFCFAKEVRLGTYSDKGMPPPGAL 1485
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYYLENQ 877
++ + D T G+RVPYV+I A GA+ +R P +L ++ + +D YY+
Sbjct: 1486 ISSKRMLEDPRTEAQYGERVPYVVISGAPGARLIDRCVPPEVLLHDSQLELDAEYYISKN 1545
Query: 878 ISKPLLRIFEPILKNASK---ELLSGDHTRSI----SISTPSNSGIMKFAK------RQL 924
I PL RIF + N + E+ R + ++ S G+ K +
Sbjct: 1546 IIPPLERIFNLVGANVRQWYDEMPKYQRVRRVESAEEYASASREGVFSTKKTLESYMKSS 1605
Query: 925 SCIGCKALISNG--TLCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLH 979
SC+ C+ + G +C+ C + L+ + +E ++ L C+ C G S
Sbjct: 1606 SCVVCREKLDEGEEQICNGCLRDSHVSLLHMRNRLMKEERRDVY--LQKICRSCMGASWG 1663
Query: 980 QDVLCTSRDCPIFYRRKK 997
++V C S+DCP+FY R +
Sbjct: 1664 EEVRCDSKDCPVFYTRTR 1681
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 86/223 (38%), Gaps = 47/223 (21%)
Query: 110 LPLSSGSAA--------IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQ 161
LPL G+A +IR+FG T G VC +HG PY YI + P +++ +
Sbjct: 37 LPLGDGTAPKDARPKVPVIRVFGATETGQKVCAHIHGAFPYLYIEYQGSLNPKEVNTAIR 96
Query: 162 ILEGRMREA-------NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVA 214
L A N + +V HI +V K Y + FLKI + P +
Sbjct: 97 TLHMSADHALAVSYRRNAYERKISYVAHITLV-KGVPFYGYHVGYRFFLKIYLFNPMHMN 155
Query: 215 SCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWI-------EVPVGKYR 267
+L +G + + YES++ + ++M D N+ G ++ P+ Y
Sbjct: 156 RLADLLRQG----AVMKRVLQPYESHLQYLAQWMCDYNLYGCAYLRSSKVMFRAPIPIYS 211
Query: 268 K--------------------TAKTLSYCQLEFDCLYSDIISR 290
+ T S+C LE D DI++R
Sbjct: 212 ENLTHRWHDRSIPPGSVSDISTLPRQSHCDLEVDIHVQDIVNR 254
>gi|342878035|gb|EGU79446.1| hypothetical protein FOXB_10031 [Fusarium oxysporum Fo5176]
Length = 1682
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 196/681 (28%), Positives = 325/681 (47%), Gaps = 47/681 (6%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y + + +L+ + H+S + + + G
Sbjct: 999 TGRHMVNVWRAMRGELN---LLQYTMENV-VWHLLHRRIPHYSWQSLTNWYKGGKHRELN 1054
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R+ Y + +LD + E AR+ GV + SRG KV S + R AK +
Sbjct: 1055 RMLRYYQNRTKIDLEILDANELVSRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1114
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV PN KQ G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1115 NFLLVSPNRKQVGGQNALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFL 1174
Query: 540 TP-EDARKLN---------------LPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
D R +N L + +N P+G + K+ ++K +L ++L E+L
Sbjct: 1175 GRVTDWRGMNKMGFTEYKRQKGLLALLEDYINIAPNGMMYAKTEIRKSLLAKMLTEILET 1234
Query: 584 RKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1235 RVMVKSGMKQDKDDKTLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTG 1294
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + +V + AEV+YGDTDS+ + T + A +G E + I+
Sbjct: 1295 RETLERAIAYIH----SVEKW--GAEVVYGDTDSLFIYLKGRTKDEAFDIGNEISKAITE 1348
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLV 760
+PIKL+FEKVY+P +L++KKRY G + + ++ + D KGIETVRRD + +
Sbjct: 1349 MNPRPIKLKFEKVYHPCVLLAKKRYVGYKYESKDQVKPEFDAKGIETVRRDGTPAEQKIE 1408
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + D+ Y + ++ N + + K + T D A +
Sbjct: 1409 EKALRLLFETADLSQVKDYFQKQCQKIMRNNVSVQDFCFAKEVRLGTYSDKGAPPAGALI 1468
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
+ + +DA P G+RVPYV+I A GA+ +R P +L N + +D YY+ +
Sbjct: 1469 STKRMLQDARAEPQYGERVPYVVITGAPGARLIDRCVAPEELLSNPHWQLDAEYYISKNL 1528
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTP--SNSGIMKFAKRQLSCIGCKALIS-- 934
PL RIF + N + + I +T ++ + +C+ C S
Sbjct: 1529 IPPLERIFNLVGANVRQWYDEMPKVQRIYHATTLGKKKTTLESYMKSTNCLVCGLKFSQE 1588
Query: 935 NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFY 993
+ LC C+ +++ E + + C+ C G +DV C S+DCP+F+
Sbjct: 1589 DNALCPSCRKNAPSSLLTLQTRLTTEERRLQEVLSLCRSCSGLGPIEDVQCDSKDCPVFW 1648
Query: 994 RR------KKAQKDMAEAKLQ 1008
R K Q++ ++ +Q
Sbjct: 1649 TRMRQASKTKGQRNASQPVIQ 1669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 39/202 (19%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
++R+FG T G VC +HG PY Y+ G+ PD+ H + R+ +S +
Sbjct: 42 VVRVFGSTETGQKVCAHIHGAFPYLYVEYEGGLSPDED---HALAVSYRRDQKGDSA--R 96
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
FV I +V K Y + FLKI + P ++ +L +G+ + F YE
Sbjct: 97 FVARITLV-KGVPFYGFHVGYRFFLKIYMFNPIVMTRLADLLQQGVIMKN----KFQPYE 151
Query: 239 SNVLFALRFMIDCNIVGGNWIEV-------PVGKYRKTAKTL------------------ 273
+++ + L+FM D N+ G ++++ PV +Y + + +L
Sbjct: 152 AHLQYLLQFMTDFNLYGCDYLDASVTRFRSPVPEYEQGSSSLHKWHSRSISVDHITDETT 211
Query: 274 ----SYCQLEFDCLYSDIISRH 291
S+C +E D DII+RH
Sbjct: 212 LPRSSHCSIEVDICVQDIINRH 233
>gi|387593494|gb|EIJ88518.1| hypothetical protein NEQG_01208 [Nematocida parisii ERTm3]
Length = 620
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 132/250 (52%), Positives = 178/250 (71%), Gaps = 5/250 (2%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH++ I L NG ETR+RL VYCLKD YLP R++ NY E+ARVTGVP+
Sbjct: 375 QKEDVHYTQIKPLYNGTDETRKRLGVYCLKDTYLPIRIMYTKNLFINYCELARVTGVPVE 434
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FL++RGQ I+VLSQLLR+AK+ N ++P + G+E+ TYEG V+E GFY P+ LD
Sbjct: 435 FLVNRGQGIRVLSQLLRQAKKYNYILPVI--IGAEE-TYEGGYVMEPNRGFYSNPVVVLD 491
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
+ASLYPSI+MAYNLCY+TL++ E ++ + ++P+G+ F++ + G+LP IL
Sbjct: 492 YASLYPSIIMAYNLCYTTLLSKEQVAHMD--KDDYTESPTGDYFLRREKKPGLLPVILTS 549
Query: 580 LLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTS 639
LL RK +A+LK KDP KA L+ RQLALK+SANSVYGFTGA+ LPCI IS SVT
Sbjct: 550 LLEGRKAVRAELKNTKDPELKASLNARQLALKVSANSVYGFTGASKTGLPCIPISRSVTG 609
Query: 640 YGRQMIEHTK 649
+GR++++ K
Sbjct: 610 FGREILKKQK 619
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 39/314 (12%)
Query: 90 SIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQ 149
SI+F L I Y + D + + + G T G V C V G YFYIS
Sbjct: 6 SIIFLPLYIYYTVTDDGPQ-----------VHMQGKTESGEEVECTVSGHLHYFYISK-- 52
Query: 150 GMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVAL 209
+ G + KV + + I V K +I Y + +++ + +I V
Sbjct: 53 -------------VPGEIINEESLKKVHKEIVKISTVIKSNIYGYSEGENE-YYQIYVRT 98
Query: 210 PTMVAS-CRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV-PVGKYR 267
P ++ S C + + I++D + +E+N+ + +RFM+D +VG ++EV P +
Sbjct: 99 PKLIQSVCTAVKEHFIRIDRT-HEPRNVFETNIGYIIRFMVDTGLVGMGYVEVLPETQEH 157
Query: 268 KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVI 327
K K L L +D P K+ P +ILS DIEC G FP P HDPV+
Sbjct: 158 KNNKLL---------LTADSTKISPNKSVVKLPPIKILSLDIECIGEDNKFPTPQHDPVV 208
Query: 328 QVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIG 387
Q+ N V + + + + PI GV + SF E+++L AW ++ ++PDV+ G
Sbjct: 209 QIGNAVAVYPSPVIIEKVLFCTRPTNPIPGVTIFSFMDEKEMLTAWSQWVSALNPDVLTG 268
Query: 388 YNICKFDLPYLIEK 401
YNI +FD+PYL+ +
Sbjct: 269 YNITQFDMPYLLNR 282
>gi|429962842|gb|ELA42386.1| hypothetical protein VICG_00485 [Vittaforma corneae ATCC 50505]
Length = 419
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 167/419 (39%), Positives = 218/419 (52%), Gaps = 83/419 (19%)
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI-- 355
K+ P +ILSFDIEC FP+ DP+IQ+ N V G R + LK A I
Sbjct: 7 KVIPLKILSFDIECCSETQSFPDSKKDPIIQIGNSVGRYGVSG-LSRTIFCLKETASIPN 65
Query: 356 ----------------------------VGVDVMSFE----TERDVLLAWRDFIREVDPD 383
+G ++ SF+ +R +L +DF R D
Sbjct: 66 SNVYWFETEEELLNAWREYFLETNPDIVIGYNIKSFDFSYILDRAEILRLKDFGRLGRTD 125
Query: 384 V------------MIGYNICK---------FDLPYLI---------------------EK 401
M G K FDL ++I +K
Sbjct: 126 KVSRVVNRQQSSKMFGTFDAKDINIEGRLIFDLLHVIRRDHKLRSYSLNSVSVHFLGDQK 185
Query: 402 EDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFL 461
EDV S + DLQNGN ETR R+A YCL D YLP ++ DKL + NY E++R T VPI F
Sbjct: 186 EDVPPSSMFDLQNGNKETRARIASYCLHDTYLPMQIFDKLNVLINYSELSRATYVPIDFF 245
Query: 462 LSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFA 521
+RG SIKVL+Q+ R++ + +IP+V + E YEG V++ GFY PI LDF
Sbjct: 246 STRGTSIKVLTQIYRESSKHGYLIPDV-EVTDEYVPYEGGFVMDPIRGFYSDPITVLDFT 304
Query: 522 SLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELL 581
SLYPSIM++ NLCY+TL+T E K+ KTP+ F ++ ++GILP++L LL
Sbjct: 305 SLYPSIMISKNLCYTTLLTKEQYDKVGGI-----KTPTNNYFCSASTKEGILPQVLRNLL 359
Query: 582 AARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSY 640
ARK AKA K + DP+ K LD RQ ALKI ANS+YGFTGATVGQLPCIEIS S T++
Sbjct: 360 KARKEAKALFKASTDPIIKRSLDARQYALKICANSLYGFTGATVGQLPCIEISQSTTAF 418
>gi|392597385|gb|EIW86707.1| hypothetical protein CONPUDRAFT_95484 [Coniophora puteana RWD-64-598
SS2]
Length = 1571
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 185/602 (30%), Positives = 295/602 (49%), Gaps = 42/602 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGS 493
+LL + I E ARV GV ++SRG KV S + R AK ++ V+ P+ + G
Sbjct: 939 QLLAQADVITKTSEFARVFGVDFFSVISRGSQFKVESFMFRIAKPESFVLLSPSKQDVGR 998
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---------TPEDA 544
+ ++E + FY P+A LDF SLYPSIM+AYN CYST +
Sbjct: 999 QNAAECMPLIMEPLSAFYNGPLAVLDFQSLYPSIMIAYNYCYSTCLGRVSGFQGKNKLGV 1058
Query: 545 RKLNLPPECVNK-------TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK-D 596
+LN+ P +N+ +P+G +VK ++KG+L +L ELL R K +K A+ +
Sbjct: 1059 SELNISPSLLNRLKDHLEVSPNGIVYVKPTIRKGLLGRMLTELLDTRVMVKQAMKTAQGN 1118
Query: 597 PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDK 655
+ +LD RQL+LK AN YG+T AT G++P +EI+ S+ GR+ +E +L+E
Sbjct: 1119 KALRKILDARQLSLKYIANVTYGYTSATFSGRMPAVEIADSIVQSGRETLEKAIQLIE-- 1176
Query: 656 FTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
A V+YGDTDSV V T + A K+G E A ++ P+KL+FEKV+
Sbjct: 1177 ----TNKRWGARVVYGDTDSVFVYLEGKTKDQAFKIGNEIAQTVTLINPAPVKLKFEKVF 1232
Query: 716 YPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP 774
P +L++KKRY G + P++ + D KGIETVRRD + +V +CL + +D+
Sbjct: 1233 LPCILMAKKRYVGFKYEAPDEVTPQFDAKGIETVRRDGTPAQQRMVEKCLKILFRTQDLS 1292
Query: 775 GAVQYVKSTISDLLMNRMDLSLLVITKGL-TKTGDDYEVKAAHVELAERMRKRDAATAPN 833
Y T + +L N++ + + K + T D +A R DA P
Sbjct: 1293 KVKDYCYETWAKILRNKLPVQDFIFAKEVKMGTYSDIFPPPPGAAVAARRMTEDAGYEPQ 1352
Query: 834 VGDRVPYVIIKAAKGAKAYERSEDP-IYVLENNIPIDTHYYLENQISKPLLRIFEPI--- 889
G+RVPYVI++ + ++ +R+ P ++++ I +D YY+ + PL RIF +
Sbjct: 1353 YGERVPYVIVRGDRSSRLVDRAVAPEQLIVDSQISLDAFYYIARVLIPPLERIFNLVGAD 1412
Query: 890 LKNASKELLSGDHTRSISIS-TPSNSGIMKFAKRQL-------SCIGCKALISNGTLCSH 941
++ ++ S+ +S +P+ + + A+ ++ C+ C + G +C
Sbjct: 1413 VREWYDDMPKDSKLDSMDLSMSPTKAKLDILARLKIEEHFWPSECLSCGTPFAEG-ICPG 1471
Query: 942 CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD-VLCTSRDCPIFYRRKKAQK 1000
C A + Q E + C C G D V C + C Y R KA+K
Sbjct: 1472 CMDDPASSLPTLLHYFQAEERHLLATQSVCSTCAGRPPADPVPCLNLSCSWLYERNKAEK 1531
Query: 1001 DM 1002
+
Sbjct: 1532 SI 1533
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF---------HQILEGRMRE 169
+IRI+GV+ GH C +H PYF++ M P+ ++ + H I R+
Sbjct: 35 VIRIYGVSSVGHKACVHIHQVYPYFFVEYNGLMTPESVNEYIGKLIVSLNHAIALSLKRD 94
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL 229
+ QFVR I +V+ + S PFLKI+V P++ + ++ G+ +
Sbjct: 95 LDS-----QFVRAILLVKGIHFYGFHSMHS-PFLKILVLDPSLYSRAVNLMRSGVVMH-- 146
Query: 230 GMKSFMTYESNVLFALRFMIDCNIVGGNWIEV 261
F YES++ F L+FM D + G WI +
Sbjct: 147 --TRFRIYESHLNFILQFMCDFGLYGCGWIHL 176
>gi|360086542|ref|YP_004940227.1| UL54 gene product [Saimiriine herpesvirus 3]
gi|359832279|gb|AEV80915.1| DNA polymerase catalytic subunit [Saimiriine herpesvirus 3]
Length = 1024
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 276/541 (51%), Gaps = 62/541 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I N R + YC++DA L + L + + F + +AR+ + +
Sbjct: 460 QKDDLSYKDIPVKFLANEVGRAVVGKYCVQDALLVKDLFNVINFHYEAGAVARLAKIAMR 519
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAG-SEQGTYEGATVLEARAGFYEKPIATL 518
++S GQ +++ + LL + +NL++P K +G + TY+GATV E G+Y P+
Sbjct: 520 RVVSDGQQVRIYTSLLDECSCRNLILPTYKNSGLGDDVTYQGATVFEPEVGYYNDPVLVF 579
Query: 519 DFASLYPSIMMAYNLCYSTLVT-----PEDARKLNLPPECVNKTPSGETFVKSNLQKGIL 573
DFASLYPSI+MA+NLCYSTL+ PE + + E + FVK ++ +L
Sbjct: 580 DFASLYPSIIMAHNLCYSTLIMDNGECPEADKIYEVKFE----NGTVYRFVKPEVRPSVL 635
Query: 574 PEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEI 633
E+L + +A RK + +K+ DPL++ +LD QLALK++ NS YGFTG G LPC+ +
Sbjct: 636 SELLTKWVAQRKAVREAMKDCADPLKRTLLDKEQLALKVTCNSFYGFTGVANGMLPCLPV 695
Query: 634 SSSVTSYGRQMIEHTKKLVEDKFTTV--------------GGYEHNAEVIYGDTDSVMVQ 679
++S+T GR M++ T + + D F + GG E A+VIYGDTDSV V
Sbjct: 696 AASITRIGRGMLQDTARFIHDNFASPDFLKTFFNEEDYVEGGVE--AKVIYGDTDSVFVC 753
Query: 680 F-GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+ G+ R A S F P+KLEFEKV+ ++I KKRY G E
Sbjct: 754 YRGLKASALKASAERVARHVTSCLFTHPVKLEFEKVFISLMMICKKRYIG----KIEGTT 809
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA---------------------- 776
+ KG++ VR+ +C VK ++ + L + D ++ A
Sbjct: 810 GLSMKGVDLVRKTSCEFVKKVIKDVLALLFDDPEVSQAAVNLHRYSMEVLKKQGPPAGFL 869
Query: 777 --VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATAPN 833
++ + L R+ + LV++ L+K Y + H+ + +R+ R + P+
Sbjct: 870 KIIERLHEARDQLQTGRVCVDELVLSSVLSKDISLYKQPNLPHLSVIKRLAAR-SEELPS 928
Query: 834 VGDRVPYVIIKAAKGAK----AYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPI 889
VGDRV YV+ A ++ YE +EDPI+V EN +PI Y E Q+ K + + P+
Sbjct: 929 VGDRVFYVLTAAPVDSRRKMNNYELAEDPIFVKENQVPIHADKYFE-QVLKAITNVLSPV 987
Query: 890 L 890
Sbjct: 988 F 988
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 147/335 (43%), Gaps = 39/335 (11%)
Query: 87 QCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYIS 146
QC S++ + + + V R ++P S +IR FGV G S+C V G + YFY
Sbjct: 89 QCDSVLTIETN-ENVPPRYRRHIVP----SGNVIRFFGVVESGQSICVNVFGQQSYFYCE 143
Query: 147 CPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIV 206
P ++ H L R + +P K SI Y P L V
Sbjct: 144 HPDTDRLREVIHSIAELVPEPRHPCAVTVLP--------ANKMSIYGYGTS-FVPNLHRV 194
Query: 207 VALPTMVASCRG--ILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVG 264
M+A G +LD G F YE V R ++D + W +
Sbjct: 195 SISNWMMARKIGQYMLDHG----------FSVYEIRVDPLTRLVVDKKLTTFGWCFLDQY 244
Query: 265 KYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTH- 323
+ R T +S C +E DC S++ R PE + +R LSFDIEC G FP P +
Sbjct: 245 EVR-TQGRVSTCDVELDCEVSELFCR-PED--TSWPLYRCLSFDIECLSAGGGFPTPENV 300
Query: 324 -DPVIQVANLVTLQGEKQPFI------RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDF 376
D VIQ++ + G+ + +++ T+ SCAPI VDV F +E ++LL + F
Sbjct: 301 DDIVIQISCVCYATGKDDADVSFGRSGKHLFTIGSCAPIDNVDVYEFPSEYELLLGFFMF 360
Query: 377 IREVDPDVMIGYNICKFDLPYLIEK-EDVHHSIIS 410
+ ++ GYNI FD YL+ + E+V+ +S
Sbjct: 361 FKRYGACIVTGYNINSFDFRYLLARLENVYKVNVS 395
>gi|406868498|gb|EKD21535.1| DNA polymerase zeta catalytic subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 2719
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 204/674 (30%), Positives = 310/674 (45%), Gaps = 52/674 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQ----NGNAETR 420
T R ++ WR E++ ++ Y + L + + H +DL NG
Sbjct: 1055 TGRHMINIWRAMRSELN---LLQYTLENVAFHLLHRR--IPHFTWADLTRWYVNGKTRDL 1109
Query: 421 RRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
++ + L LLD I E AR+ GV + SRG KV S + R AK
Sbjct: 1110 AKVVNHYATRVQLDLELLDANELIPRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKP 1169
Query: 481 KN--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
+N LV P+ KQ G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST
Sbjct: 1170 ENFMLVSPSRKQVGGQNALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTF 1229
Query: 539 VT----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLA 582
+ R L L + +N P+G + K ++K +L ++L E+L
Sbjct: 1230 LGRIVNWRGKSKMGFAEYQRQQRLLELLKDHINIAPNGIMYAKPEIRKSLLAKMLGEILE 1289
Query: 583 ARKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K+ +K KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1290 TRVMVKSGMKVDKDDKSLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQT 1349
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
GR+ +E L+ +V + AEV+YGDTDS+ V T + A +G E A ++
Sbjct: 1350 GRETLERAIALIH----SVKKW--GAEVVYGDTDSIFVYLKGRTKDQAFDIGEEIAKTVT 1403
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+PIKL+FEKVY P +L++KKRY G Y + + D KGIETVRRD + +
Sbjct: 1404 NMNPRPIKLKFEKVYLPCVLLAKKRYVGFKYESRNQSEPDFDAKGIETVRRDGTPAEQKI 1463
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVE 818
+ L + D+ Y ++ + + + + T D
Sbjct: 1464 EEKALKILFRTSDLSQVKSYFHHECEKIMKGSVSVQDFCFAREVKLGTYSDKGPPPPGAL 1523
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQ 877
++ + DA P G+RVPYV+I A GA+ +R P +LEN + +D YY+
Sbjct: 1524 ISTKRMLEDARAEPQYGERVPYVVITGAPGARLIDRCVAPEELLENEHSELDAEYYISKN 1583
Query: 878 ISKPLLRIFEPI---LKNASKELLSGDHTR---------SISISTPSNSGIMKFAKRQLS 925
+ PL RIF + ++N E+ R IS N ++ + S
Sbjct: 1584 LIPPLERIFNLVGANVRNWYDEMPKVQRIRRVDANLQLQGISKDLGINKKTLESYMKSSS 1643
Query: 926 CIGCK-ALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVL 983
C+ CK L G++C C + ++ E F + CQ C G S +V
Sbjct: 1644 CLVCKEKLEVEGSICPKCLSEKPTSLLTLRHRLNGAERKFMDIQKICQGCSGISPLDEVR 1703
Query: 984 CTSRDCPIFYRRKK 997
C S+DCP+FY R K
Sbjct: 1704 CDSKDCPVFYTRTK 1717
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 49/212 (23%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI-SHFHQI---------LEGRMR 168
+IR+FG T G VC +HG PY Y+ + DD+ ++ H++ + R
Sbjct: 42 VIRVFGATETGQKVCAHIHGAFPYLYVEYNGSLIEDDVGAYIHRLHLSIDFALAVSYRRN 101
Query: 169 EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLD 227
++ N+K FV I +V + I +Y F LKI + P ++ +L +GI +
Sbjct: 102 VSDDNAK---FVARITLV--KGIPFYGFHVGYRFYLKIYMLNPMVMTRLGDLLRQGIIMK 156
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV-------PVGKYRKTAKT-------- 272
K F YE+++ + L++M D N+ G +I+ PV KY +
Sbjct: 157 ----KVFQPYEAHLQYLLQWMADYNLYGCGYIDCGKVTFRGPVPKYDELDNISHLWHDRS 212
Query: 273 --------------LSYCQLEFDCLYSDIISR 290
+S+C LE D I++R
Sbjct: 213 IPADSVSDESELPRVSHCSLEVDICLQHILNR 244
>gi|326471536|gb|EGD95545.1| polymerase zeta subunit [Trichophyton tonsurans CBS 112818]
Length = 1694
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 308/624 (49%), Gaps = 58/624 (9%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
+LD I E AR+ G+ + SRG KV S + R AK +N ++ P+ KQ G +
Sbjct: 1055 ILDANELISRTSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFILISPSRKQVGQQ 1114
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LVTPEDARK---- 546
V+E ++ FY P+ LDF SLYPSIM+AYN CYST +V K
Sbjct: 1115 NALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWRGRNKMGIT 1174
Query: 547 --------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKD-- 596
L L + +N P+G + K ++K +L ++L E+L R K +KE KD
Sbjct: 1175 DYEREPGLLGLLKDQINIAPNGIIYAKQEIRKSLLAKMLTEILETRVMVKNGMKEDKDDR 1234
Query: 597 PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDK 655
PL++ +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +E L+
Sbjct: 1235 PLQR-LLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTARETLEKAIALIH-- 1291
Query: 656 FTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
+V + AEV+YGDTDS+ + T A LG E I+ + +P+KL+FEKVY
Sbjct: 1292 --SVKRW--GAEVVYGDTDSLFIYLKGRTRAEAFDLGEEITKTITDSNPRPVKLKFEKVY 1347
Query: 716 YPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP 774
+P +L++KKRY G Y + ++ + D KGIETVRRD + + + L + D+
Sbjct: 1348 HPCVLLAKKRYVGYKYESKNQEKPEFDAKGIETVRRDGTPAEQKIEEKALRLLFETSDLS 1407
Query: 775 GAVQYVKSTISDLLMNRMDLSLLVITK--GLTKTGDDYEVKAAHVELAERMRKRDAATAP 832
+Y + S ++ ++ + K L D + A+RM + D P
Sbjct: 1408 RVKEYFQKQCSKIMRGKVSVQDFCFAKEVKLGTYSDKGAPPPGALISAKRMLE-DPRLEP 1466
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILK 891
G+RVPYV++ A GA+ +R P +L++ + +D YY+ + PL RIF +
Sbjct: 1467 QYGERVPYVVVSGAPGARLIDRCFPPEVLLQDPQLELDAEYYISKNLIPPLERIFNLVGA 1526
Query: 892 NASK---ELLSGDHTRSI--SISTPS-------NSGIMKFA----KRQLSCIGCKALISN 935
N + E+ R +++TP+ N+ + K R SC+ C++ +++
Sbjct: 1527 NVRQWYDEMPKYQRMRRTEGAMNTPAGRSGQDGNNAMFKKTLESYMRSASCVVCRSKLNS 1586
Query: 936 -------GTLCSHCKGREAEL-YCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTS 986
+C+ C ++ L K ++ E E L C+ C G +++ C S
Sbjct: 1587 EEQRQQKEAICNVCLRQQPHLSLLKLEYRMHESERRVANLQDVCRSCMGVGWGEEIKCDS 1646
Query: 987 RDCPIFYRRKKAQKDMAEAKLQLD 1010
+DCP+FY R + D+ + L+
Sbjct: 1647 KDCPVFYSRMRQTSDLGHTRALLE 1670
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 96/246 (39%), Gaps = 38/246 (15%)
Query: 83 GYVSQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPY 142
YV Q + +LD + D+N L S +IR+FG T G VC +HG PY
Sbjct: 9 NYVDHYQ-VTPTELDPQFT-SDNNGPQLRSGSIKVPVIRVFGATETGQKVCAHIHGALPY 66
Query: 143 FYISCPQGMGPDDISHF----------HQILEGRMREAN------------RN--SKVPQ 178
Y+ + P + + H+I+ +R + RN
Sbjct: 67 LYLEYKGPLDPAEGQEYILSYRYKSAKHRIVNAAIRSLHASIDHALALSYRRNPFDHSTA 126
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK-SFMTY 237
FV +I +V+ Y F K+ + P + +L L G MK + Y
Sbjct: 127 FVAYISLVKGIPFYGYYVGYRYYF-KVYLLNPLHMTRLADLL-----LQGAVMKRALQPY 180
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEF-DCLYSDIISRHPEGEF 296
ES++ F ++M D ++ G +I K+R SY LE D L+ D P+G+
Sbjct: 181 ESHLQFIPQWMCDYSLHGCTFINCSKVKFRPPVP--SYISLENPDHLWHD--ESIPQGDI 236
Query: 297 SKMAPF 302
S F
Sbjct: 237 SDPTEF 242
>gi|27452795|gb|AAO12301.1| DNA polymerase [Porcine lymphotropic herpesvirus 3]
gi|27452810|gb|AAO12315.1| DNA polymerase [Porcine lymphotropic herpesvirus 3]
Length = 1001
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 178/523 (34%), Positives = 270/523 (51%), Gaps = 53/523 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L G+A R RL +YC++D+ L LL M E+A++ +P+
Sbjct: 455 KKEDVSYKEIPALFKGSANDRARLGLYCVQDSILVMDLLKYFMTHVEISEIAKIANIPMR 514
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+++ GQ I+V S LL AK + ++P V Q + +G Y+GATV+ +GFY P+ +D
Sbjct: 515 RVITDGQQIRVFSCLLASAKSRGYILP-VSQTANFEG-YQGATVINPLSGFYNTPVLVVD 572
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKT---PSGET-FVKSNLQKGILPE 575
FASLYPSI+ A+NLCYSTL+ ED K E +T SG FVK ++ + +L
Sbjct: 573 FASLYPSIIQAHNLCYSTLIHHEDLHKHPQLKESDYETFVISSGPVHFVKKHISESLLSN 632
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L LA RK + +L DP K +LD +QLA+K++ N+VYGFTG G LPC++I+
Sbjct: 633 LLTTWLAKRKTIRKELAACNDPKLKTILDKQQLAIKVTCNAVYGFTGVASGMLPCLKIAE 692
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTV--------------GGYEHNAEVIYGDTDSVMVQFG 681
+VT+ GR M+E TK VE+ T+ +V+YGDTDS+ +
Sbjct: 693 TVTTQGRAMLEKTKIFVENLNHTMLQAICYPLDIPLLPKDVTMPFKVVYGDTDSLFINCP 752
Query: 682 VPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM 740
+ E + G + A +I+ F PIKLE EKV+ LL++KKRY G+ D++
Sbjct: 753 GYSTETVVAFGDQLAQHITDKLFTSPIKLESEKVFNCLLLLTKKRYVGILSN-----DRI 807
Query: 741 DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYV-KSTIS-------------- 785
KG++ VR+ C V+ L +L D + A ++ K IS
Sbjct: 808 LMKGVDLVRKTACTYVQETSKAVLDLVLNDETVRDAANFLSKRKISLCFEQGLPEGFVKV 867
Query: 786 ---------DLLMNRMDLSLLVITKGLTKTGDDYEV-KAAHVELAERMRKRDAATAPNVG 835
+L NR+ + L+ + L K Y+ H+ + +++ R+ P V
Sbjct: 868 IDILNKAYRELSENRVPVQKLIYSTELNKDFSCYKSHNLPHLAVYKKILARNEE-PPQVH 926
Query: 836 DRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
DR+PYV I + G + +EDP +V N IPI Y + I
Sbjct: 927 DRIPYVFI-SGTGTLVSDMAEDPAFVEANKIPIARDLYFDKII 968
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 173/359 (48%), Gaps = 54/359 (15%)
Query: 69 ASRLAKWARPPLSSGYVSQCQS--IMFQQLDIDYVIGDSNR----------ELLPLSSGS 116
+R + W + + G + C S + F DI + D +R +++P S
Sbjct: 65 TTRTSMWTQ---ARGSTTDCFSGELNFHVYDIIETVYDKDRCDEVPFHLQTDIVP----S 117
Query: 117 AAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKV 176
++++FG T E SVC V G + YFY ++++ +H I + +R+
Sbjct: 118 GIVLKLFGRTSENMSVCVNVFGQKVYFYAYSTT----ENVNIYHIIQQTMSENGHRHCNF 173
Query: 177 PQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMT 236
++ V+++ + Y + + + KI ++ M+ +L ++ G F
Sbjct: 174 -----NVVKVKRKFLDTYDSIEHEVY-KITLSSFHMMT----VLSNRLRQSG-----FTV 218
Query: 237 YESNVLFALRFMIDCNIVGGNWIE----VP-VGKYRKTAKTLSYCQLEFDCLYSDIISRH 291
+E+NV RF+ D N+ W VP V +YR ++ LEFDC +D++
Sbjct: 219 FEANVDAVSRFITDNNLCTFAWYSCSGAVPRVAQYRD-----AHTALEFDCRVTDLVIHR 273
Query: 292 PEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLVTLQGEKQPFIRNVMTL 349
++ + ++I++FDIEC G G FP + D +IQ++ ++ G+ + + ++++
Sbjct: 274 ERNDWPQ---YKIMAFDIECLGEHG-FPNASMDGDMIIQISCIIWTVGQDENYDNILLSV 329
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSI 408
+C PI + F +E D+L A+ IR+ D +++ GYNI FD PY++ + +V +++
Sbjct: 330 GTCTPIPNTKIYQFPSELDMLYAFCSMIRDFDIEIVTGYNIANFDFPYILHRANVIYNM 388
>gi|380491086|emb|CCF35569.1| DNA polymerase family B, partial [Colletotrichum higginsianum]
Length = 1706
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 190/620 (30%), Positives = 297/620 (47%), Gaps = 38/620 (6%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
+L Y L +L+ I E AR+ GV + SRG KV S + R AK +
Sbjct: 1093 KLLRYYLARTRTDIHILESNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1152
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ KQ G + V+E ++ FY P+ LDF SLYPS+M+AYNLCYST +
Sbjct: 1153 NFMLVSPSRKQVGGQNALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYNLCYSTFL 1212
Query: 540 T----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
R L L + +N TP+G FV+ ++K +L ++L E+L
Sbjct: 1213 GRIVSWRGMNKMGFTEYQRHRRLLELLKDYINITPNGMMFVRPEIRKSLLAKMLGEILET 1272
Query: 584 RKRAKADLKEAKD--PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R KA +K+ KD L+K +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1273 RVMVKAGMKQDKDDKTLQK-LLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQT 1331
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
GR+ +E + + AEV+YGDTDS+ V T + A +G E A I+
Sbjct: 1332 GRETLERAIAFIHSQ------ERWGAEVVYGDTDSLFVNLKGRTKDQAFDIGNEIAKAIT 1385
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNL 759
+PIKL+FEKVY+P +L++KKRY G + + ++ + D KGIETVRRD + +
Sbjct: 1386 DMSPRPIKLKFEKVYHPCVLLAKKRYVGYKYESKDQMKPEFDAKGIETVRRDGTPAEQKI 1445
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVE 818
+ L + D+ Y + ++ + + + + T D
Sbjct: 1446 EEKALRILFETADLSKVKAYFQQQCEKIMRGTVSVQDFCYAREVKLGTYSDKGPPPPGAL 1505
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL-ENNIPIDTHYYLENQ 877
++ + DA P G+RVPYV+I A GA+ +R P +L +++ +D YY+
Sbjct: 1506 ISTKKMLEDARAEPQYGERVPYVVITGAPGARLIDRCVAPEDLLKDSHSQLDAEYYISKN 1565
Query: 878 ISKPLLRIFEPILKNASK---ELLSGDHTRSI--SISTPSNSGIMKFAKRQLSCIGCKAL 932
+ PL RIF + N + E+ R + ++ N ++ + SC+ C
Sbjct: 1566 LIPPLERIFNLVGANVRQWYDEMPKVQRIRRVDQTLGGGLNKKTLESYLKSASCVSCHIK 1625
Query: 933 IS-NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD-VLCTSRDCP 990
+ G LC C+ + +++ E + + C+ C D V C S+DCP
Sbjct: 1626 MQVEGVLCFRCQQDAPSSLXRLQTRLNREERKYMEVVKICRSCSAMPAADEVPCDSKDCP 1685
Query: 991 IFYRRKKAQKDMAEAKLQLD 1010
+FY R K + K L+
Sbjct: 1686 VFYSRVKQSARLKTEKSALE 1705
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 43/210 (20%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF----HQILEGRMREANRNS 174
++R+FG T G VC +HG PY Y+ + P+++ + H ++ + + R
Sbjct: 42 VVRVFGSTETGQKVCAHIHGAFPYLYVEYQGSLEPEEVGAYIYRLHLSIDHALAVSYRRD 101
Query: 175 KV---PQFVRHIEMVQKRSIMYYQ-QQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
+ +FV I +V + I +Y + FLKI + P ++ +L +G+ L
Sbjct: 102 QYGDNAKFVARITLV--KGIPFYGFHVGYRFFLKIYMFNPIVMTRLADLLQQGVILKS-- 157
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIE---------------------------VPV 263
F YE+++ + L+FM D N+ G ++E +P
Sbjct: 158 --KFQPYEAHLQYLLQFMTDYNLYGCGYLETSDVYFRGPVPSCEEEGNSQHLWHDRTIPH 215
Query: 264 GKYRK--TAKTLSYCQLEFDCLYSDIISRH 291
G+ + +S+C +E D II+RH
Sbjct: 216 GRILDDLSLPRVSHCSIEVDICVQSIINRH 245
>gi|451852202|gb|EMD65497.1| hypothetical protein COCSADRAFT_180252 [Cochliobolus sativus ND90Pr]
Length = 1746
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 195/657 (29%), Positives = 314/657 (47%), Gaps = 66/657 (10%)
Query: 405 HHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSR 464
H + + NG ++ Y + L LLD + E AR+ G ++SR
Sbjct: 1059 HSDLTTWYTNGKPRDLAKVLDYFITRVQLNLDLLDANDIVPRTSEQARLLGTDFFAVISR 1118
Query: 465 GQSIKVLSQLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFAS 522
G KV S + R AK +N LV P+ KQ G + V+E ++ FY P+ LDF S
Sbjct: 1119 GSQFKVESTMFRIAKPENFILVSPSRKQVGRQNALECLPLVMEPQSAFYSSPVLVLDFQS 1178
Query: 523 LYPSIMMAYNLCYSTLVT----------------PEDARKLNLPPECVNKTPSGETFVKS 566
LYPS+M+AYN CYST + + + L L + +N P+G +VK
Sbjct: 1179 LYPSVMIAYNYCYSTCLGRIVSWRGRNKMGFMDFKREPQLLELVKDHINIAPNGMMYVKP 1238
Query: 567 NLQKGILPEILEELLAARKRAKADLKEAKD--PLEKAVLDGRQLALKISANSVYGFTGAT 624
++K +L ++L E+L R K+ +KE KD L+K +L+ RQLALK+ AN YG+T A+
Sbjct: 1239 EMRKSLLAKMLGEILETRVMVKSGMKEDKDDKTLQK-LLNNRQLALKLLANVTYGYTSAS 1297
Query: 625 V-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVP 683
G++PC EI+ S+ GR+ +E ++ + AEV+YGDTDS+ +
Sbjct: 1298 FSGRMPCSEIADSIVQTGRETLEKAIAIIH------ATEKWGAEVVYGDTDSLFIHLKGR 1351
Query: 684 TVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDT 742
T + A +G E A I+ +PIKL+FEKVY+P +L++KKRY G Y +K + D
Sbjct: 1352 TKDQAFTIGEEIAAAITAANPRPIKLKFEKVYHPCVLLAKKRYVGFKYEHRNQKEPEFDA 1411
Query: 743 KGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK- 801
KGIETVRRD + + + L + D+ +Y + + ++ R+ + + K
Sbjct: 1412 KGIETVRRDGTPAEQKIEEKALKLLFRTADLSQVKRYFQEQCAKIMEGRVSIQDFLFAKE 1471
Query: 802 -GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIY 860
L + + + +RM D P G+RVPYV+I A GA+ +R +P
Sbjct: 1472 VKLGTYSNKGHLPPGALIATKRMLA-DPRAEPQYGERVPYVVITGAPGARLIDRCVNPEM 1530
Query: 861 VLENN-IPIDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDHTRSISISTP---SN 913
+L+N+ + +D YY+ + PL RIF + N + E+ R+ISI N
Sbjct: 1531 LLQNDHLELDAEYYISKNLIPPLERIFNLVGANVRQWYDEMPKIQRIRNISIPIAPKYDN 1590
Query: 914 SG-------------IMKFAKRQLSCIGCKALISNGT-------------LCSHCKGREA 947
+G ++ + +C+ C++ + + LC+ C R A
Sbjct: 1591 NGNILIGGGHNSLKKTLESYMKSSNCLVCRSKLGPPSSTHFSSAAYAMLPLCAKCVKRPA 1650
Query: 948 ELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKKAQKDMA 1003
++ E + C+ C + ++++ C SRDCP+FY R K + +A
Sbjct: 1651 HSLLALKYRIWNSETRMKEVDAVCRHCANLAWNEEIRCDSRDCPVFYSRIKEKSRLA 1707
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 87/217 (40%), Gaps = 43/217 (19%)
Query: 112 LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF--------HQIL 163
L + +IR FG T G VC +HG PY Y+ + D ++ + Q L
Sbjct: 71 LGAPEVPVIRAFGATETGQKVCAHIHGALPYLYLEYNGSLETDVVNSYILDLRTSIDQAL 130
Query: 164 EGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG 223
R + + K +V HI +V+ Y + FLK+ + P + +L +G
Sbjct: 131 ATAYRRSTLDGK-STYVGHISLVKGVPFFGY-HVGYKVFLKVYLLNPMHMTRFADLLHQG 188
Query: 224 IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV-------PVGKYRKTAKTL--- 273
LD + F YES++ + L++M D N+ G ++I+ P+ + TL
Sbjct: 189 AILD----RVFQPYESHLQYLLQWMCDYNLYGCDYIDCAKVQFRGPIPDSDEVDTTLHKW 244
Query: 274 -------------------SYCQLEFDCLYSDIISRH 291
S+C LE D DI++R
Sbjct: 245 HNASIPTEFIADEDQYPRQSHCTLEVDICVQDILNRQ 281
>gi|38201798|gb|AAO46909.1| DNA polymerase [Sus barbatus lymphotropic herpesvirus 1]
Length = 1000
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 178/523 (34%), Positives = 270/523 (51%), Gaps = 53/523 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L G+A R RL +YC++D+ L LL M E+A++ +P+
Sbjct: 454 KKEDVSYKEIPALFKGSANDRARLGLYCVQDSILVMDLLKYFMTHVEISEIAKIANIPMR 513
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+++ GQ I+V S LL AK + ++P V Q + +G Y+GATV+ +GFY P+ +D
Sbjct: 514 RVITDGQQIRVFSCLLASAKSRGYILP-VSQTANFEG-YQGATVISPLSGFYNTPVLVVD 571
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKT---PSGET-FVKSNLQKGILPE 575
FASLYPSI+ A+NLCYSTL+ ED K E +T SG FVK ++ + +L
Sbjct: 572 FASLYPSIIQAHNLCYSTLIHHEDLHKHPQLKESDYETFVISSGPVHFVKKHISESLLSN 631
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L LA RK + +L DP K +LD +QLA+K++ N+VYGFTG G LPC++I+
Sbjct: 632 LLTTWLAKRKTIRKELAACNDPKLKTILDKQQLAIKVTCNAVYGFTGVASGMLPCLKIAE 691
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTV--------------GGYEHNAEVIYGDTDSVMVQFG 681
+VT+ GR M+E TK VE+ T+ +V+YGDTDS+ +
Sbjct: 692 TVTTQGRAMLEKTKIFVENLNHTMLQAICYPLDIPLLPKDVTMPFKVVYGDTDSLFINCP 751
Query: 682 VPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM 740
+ E + G + A +I+ F PIKLE EKV+ LL++KKRY G+ D++
Sbjct: 752 GYSTETVVAFGDQLAQHITDKLFTSPIKLESEKVFNCLLLLTKKRYVGILSN-----DRI 806
Query: 741 DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYV-KSTIS-------------- 785
KG++ VR+ C V+ L +L D + A ++ K IS
Sbjct: 807 LMKGVDLVRKTACTYVQETSKAVLDLVLNDETVRDAANFLSKRKISLCFEQGLPEGFVKV 866
Query: 786 ---------DLLMNRMDLSLLVITKGLTKTGDDYEV-KAAHVELAERMRKRDAATAPNVG 835
+L NR+ + L+ + L K Y+ H+ + +++ R+ P V
Sbjct: 867 IDILNKAYRELSENRVPVQKLIYSTELNKDFSCYKSHNLPHLAVYKKILARNEE-PPQVH 925
Query: 836 DRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
DR+PYV I + G + +EDP +V N IPI Y + I
Sbjct: 926 DRIPYVFI-SGTGTLVSDMAEDPAFVEANKIPIARDLYFDKII 967
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 173/359 (48%), Gaps = 54/359 (15%)
Query: 69 ASRLAKWARPPLSSGYVSQCQS--IMFQQLDIDYVIGDSNR----------ELLPLSSGS 116
+R + W + + G + C S + F DI + D +R +++P S
Sbjct: 64 TTRTSMWTQ---ARGSTTDCFSGELNFHVYDIIETVYDKDRCDEVPFHLQTDIVP----S 116
Query: 117 AAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKV 176
++++FG T E SVC V G + YFY ++++ +H I + +R+
Sbjct: 117 GIVLKLFGRTSENMSVCVNVFGQKVYFYAYSTT----ENVNIYHIIQQTMSENGHRHCNF 172
Query: 177 PQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMT 236
++ V+++ + Y + + + KI ++ M+ +L ++ G F
Sbjct: 173 -----NVVKVKRKFLDTYDSTEHEVY-KITLSSFHMMT----VLSNRLRQSG-----FTV 217
Query: 237 YESNVLFALRFMIDCNIVGGNWIE----VP-VGKYRKTAKTLSYCQLEFDCLYSDIISRH 291
+E+NV RF+ D N+ W VP V +YR ++ LEFDC +D++
Sbjct: 218 FEANVDAVSRFITDNNLCTFAWYSCSGAVPRVAQYRD-----AHTALEFDCRVTDLVIHR 272
Query: 292 PEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLVTLQGEKQPFIRNVMTL 349
++ + ++I++FDIEC G G FP + D +IQ++ ++ G+ + + ++++
Sbjct: 273 ERNDWPQ---YKIMAFDIECLGEHG-FPNASMDGDMIIQISCIIWTVGQDENYDNILLSV 328
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSI 408
+C PI + F +E D+L A+ IR+ D +++ GYNI FD PY++ + +V +++
Sbjct: 329 GTCTPIPNTKIYQFPSELDMLYAFCSMIRDFDIEIVTGYNIANFDFPYILHRANVIYNM 387
>gi|320036527|gb|EFW18466.1| DNA polymerase zeta catalytic subunit [Coccidioides posadasii str.
Silveira]
Length = 1677
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 197/676 (29%), Positives = 323/676 (47%), Gaps = 49/676 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLA 424
T R ++ WR E++ +I Y + +L+ K + H DL T+ R
Sbjct: 990 TGRHMINIWRAMRSELN---LIQYTLENVAF-HLLHKR-IPHYPFHDLTKWFKSTKPRNL 1044
Query: 425 V----YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
V Y + L +LD I E AR+ G+ + SRG KV S + R AK
Sbjct: 1045 VKVVNYFITRTRLNLDILDANELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKP 1104
Query: 481 KNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
+N ++ P+ Q G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST
Sbjct: 1105 ENFILISPSKAQVGQQNALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYNYCYSTF 1164
Query: 539 VTP-EDARKLN---------------LPPECVNKTPSGETFVKSNLQKGILPEILEELLA 582
+ D R N L +N P+G + + ++K +L ++L E+L
Sbjct: 1165 LGRIVDWRGRNKMGFIDYQRQPGLLGLLESQINIAPNGIMYTRPEVRKSLLAKMLTEILE 1224
Query: 583 ARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K +K K D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1225 TRVMVKGGMKANKEDRALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQT 1284
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
R+ +E ++ +V + AEV+YGDTDS+ + T + A +G E A I+
Sbjct: 1285 ARETLEKAIAMIH----SVERW--GAEVVYGDTDSLFIYLKGRTRDEAFDIGEEIAQKIT 1338
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ +P+KL+FEKVY+P +L++KKRY G Y + + + D KGIETVRRD + +
Sbjct: 1339 ASNPRPVKLKFEKVYHPCVLLAKKRYVGYKYESRGQTKPEFDAKGIETVRRDGTPAEQKI 1398
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKG--LTKTGDDYEVKAAHV 817
+ L + D+ +Y + + ++ ++ + K L + +
Sbjct: 1399 EEKALRILFETADLSRVKKYFQKQCAKIMQGKVSIQDFCFAKEVRLGTYSEKGPPPPGAL 1458
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLEN 876
A+RM + D P G+R+PYV+I A G++ +R P +L++ + +D YY+
Sbjct: 1459 ISAKRMLE-DPRLEPQYGERIPYVVISGAPGSRLIDRCVAPEVLLQDPQMELDAEYYISK 1517
Query: 877 QISKPLLRIFEPILKNASK---ELLSGDHTRSISISTPSNSGIMKFA----KRQLSCIGC 929
+ PL RIF + N + E+ R + S+ +++ R SC+ C
Sbjct: 1518 NLIPPLERIFNLVGANIRQWYDEMPKYQRVRRTDNAMISDGTLLRKTLESYMRASSCVVC 1577
Query: 930 KALISNG-TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSR 987
+ + NG LC+HC R + +VQ E + C+ C G ++V C S+
Sbjct: 1578 REKLENGEALCNHCLRRPHLSLMRLRYRVQRAEKKVANIHEVCRSCMGVQWGEEVKCDSK 1637
Query: 988 DCPIFYRRKKAQKDMA 1003
DCP+FY R + +++
Sbjct: 1638 DCPVFYSRTRTTFNLS 1653
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 12/148 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS--HFHQILEGRMREA-NRNSK 175
+IR+FG T G VC +HG PY YI + + + H ++ + + RN+
Sbjct: 42 VIRVFGATETGQKVCAHIHGAFPYLYIEYRGSLAMEQAATRSLHVSIDHALAVSYRRNAY 101
Query: 176 VP--QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
P +V HI +V K + Y + F KI + P + +L L G MK
Sbjct: 102 DPGTAYVAHISLV-KGTPFYGYHVGHKFFFKIYLLNPLHMTRLADLL-----LQGAVMKR 155
Query: 234 FMT-YESNVLFALRFMIDCNIVGGNWIE 260
+ YES++ + ++M D N+ G +I+
Sbjct: 156 VLQPYESHMQYIPQWMCDYNLYGCAYID 183
>gi|315047094|ref|XP_003172922.1| DNA polymerase zeta catalytic subunit [Arthroderma gypseum CBS
118893]
gi|311343308|gb|EFR02511.1| DNA polymerase zeta catalytic subunit [Arthroderma gypseum CBS
118893]
Length = 1681
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 192/624 (30%), Positives = 301/624 (48%), Gaps = 59/624 (9%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
+LD I E AR+ G+ + SRG KV S + R AK +N V+ P KQ G +
Sbjct: 1041 ILDANELIPRTSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFVLISPRRKQVGQQ 1100
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LVTPEDARK---- 546
V+E ++ FY P+ LDF SLYPSIM+AYN CYST +V K
Sbjct: 1101 NALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWRGRNKMGIT 1160
Query: 547 --------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKD-- 596
L L + VN P+G + K ++K +L ++L E+L R K +KE KD
Sbjct: 1161 DYEREPGLLGLLKDKVNIAPNGIIYAKQEVRKSLLAKMLTEILETRVMVKNGMKEDKDDR 1220
Query: 597 PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDK 655
PL++ +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +E L+
Sbjct: 1221 PLQR-LLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTARETLEKAIALIH-- 1277
Query: 656 FTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
+V + AEV+YGDTDS+ + T E A LG E A I+ + +P+KL+FEKVY
Sbjct: 1278 --SVKRW--GAEVVYGDTDSLFIYLKGRTREEAFDLGEEIAKTITDSNPRPVKLKFEKVY 1333
Query: 716 YPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP 774
+P +L++KKRY G Y + ++ + D KGIETVRRD + + + L + D+
Sbjct: 1334 HPCILLAKKRYVGYKYESRNQQKPEFDAKGIETVRRDGTPAEQKIEEKALRLLFETSDLS 1393
Query: 775 GAVQYVKSTISDLLMNRMDLSLLVITKG--LTKTGDDYEVKAAHVELAERMRKRDAATAP 832
+Y + S ++ ++ + K L D + A+RM + D P
Sbjct: 1394 RVKEYFQKQCSKIMRGKVSIQDFCFAKEVRLGTYSDKGAPPPGALISAKRMLE-DPRLEP 1452
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYYLENQISKPLLRIFEPILK 891
G+RVPYV++ A GA+ +R P +L+++ + +D YY+ + PL RIF +
Sbjct: 1453 QYGERVPYVVVSGAPGARLIDRCFPPDVLLQDSQLELDAEYYISKNLIPPLERIFNLVGA 1512
Query: 892 NAS---------KELLSGDHTRSISISTPSNSGIMKFAKRQL-------SCIGCKALI-- 933
N + + + + P G K+ L SC C++ +
Sbjct: 1513 NVRQWYDEMPKYQRMRRTEGAMNAPAGRPGQDGNATMFKKTLECYMKSSSCAICRSKLNT 1572
Query: 934 ------SNGTLCSHCKGREAEL-YCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCT 985
+ +C+ C ++ L K ++ E E L C+ C G +++ C
Sbjct: 1573 EEQRQQNQQPICNVCLRQQPHLSLLKLEYRMHESERRVANLQDVCRSCMGVGWGEEIKCD 1632
Query: 986 SRDCPIFYRRKKAQKDMAEAKLQL 1009
S+DCP+FY R + D+ + L
Sbjct: 1633 SKDCPVFYARTRQTSDLRHTRALL 1656
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 46/235 (19%)
Query: 95 QLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPD 154
+LD ++ D+ EL S +IR+FG T G VC +HG PY Y+ + P
Sbjct: 20 ELDPQFISNDNESELRS-RSIKVPVIRVFGATETGQKVCAHIHGALPYLYLEYKGDLNPA 78
Query: 155 DISHFHQILEGRMREA-----NRN--SKVPQFVRHIEMVQKRSIMYYQQQKS-QPFLKIV 206
+++ + L + A RN FV +I +V + I +Y + + K+
Sbjct: 79 EVNTAIRTLHASIDHALALSYRRNPLDHSTAFVAYISLV--KGIPFYGYHVGYRYYFKVY 136
Query: 207 VALPTMVASCRGILDRGIQLDGLGMKSFMT-YESNVLFALRFMIDCNIVGGNWIEVPVGK 265
+ P + +L + G MK + YES++ F ++M D N+ G +I K
Sbjct: 137 LLNPLHMTRLSDVL-----MQGAVMKRVLQPYESHLQFIPQWMCDYNLHGCAYINCSKIK 191
Query: 266 YRKTAKTL-----------------------------SYCQLEFDCLYSDIISRH 291
+R + S+C +E D DI++RH
Sbjct: 192 FRPPVPSYINLESSDHLWHDESIPQQHISDPDKFPRQSHCAIEVDIHVQDILNRH 246
>gi|21552715|gb|AAM62282.1|AF376034_2 DNA polymerase [Mustelid herpesvirus 1]
Length = 996
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 167/540 (30%), Positives = 278/540 (51%), Gaps = 50/540 (9%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R +L VYC+KD+ + +LL M E+A++ +P
Sbjct: 450 QKEDVSYKDIPHLFRAGPAGRAKLGVYCVKDSEIVLQLLRYFMTHIEISEIAKIAKIPTR 509
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL AK +N ++P K G G Y+GATV++ GFY PI +D
Sbjct: 510 RVLTDGQQIRVFSCLLDVAKDQNYILPQ-KDRGDSDG-YQGATVIDPIPGFYNTPILVVD 567
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP---ECVNKTPSGETFVKSNLQKGILPEI 576
FASLYP+I+ A NLCYST++ E N+ P + N + FVK + Q +L +
Sbjct: 568 FASLYPTIIQANNLCYSTMIPHEKLHIYNISPHDYQTFNLSSGPVHFVKKHKQVSLLATL 627
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
L+ L+ R+ K L+ DP + +LD +QLA+K++ N+VYGFTG + G LPC++I+ +
Sbjct: 628 LDAWLSKRRAIKKTLQSVTDPNLRTILDKQQLAIKVTCNAVYGFTGVSSGILPCLKIAET 687
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVG-----------GYEHNAEVIYGDTDSVMVQF-GVPT 684
+T GR+M+E +K +E+ T V Y+ N VIYGDTDS+ ++ G P
Sbjct: 688 ITYEGRRMLEKSKNFIEN-ITPVELERIIHKPINCAYDANFRVIYGDTDSLFIECQGYPI 746
Query: 685 VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKG 744
E + + A F +PIKLE EK++ +++SKKRY G+ ++ KG
Sbjct: 747 SEVSGFCDQLAKITTEALFEEPIKLEAEKIFQCLIILSKKRYIGILSKG-----ELLMKG 801
Query: 745 IETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------VQYV 780
++ +R+ +C ++N E L+ +L D ++ A + +
Sbjct: 802 VDLIRKTSCKFIQNTSKEVLNLLLHDTEVREAACNLSSKQINSVYSEGLPLPLFKVIDIL 861
Query: 781 KSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA-AHVELAERMRKRDAATAPNVGDRVP 839
+ L N + + L T L+K Y+V H+ + ++ R+ P + DR+P
Sbjct: 862 NDSYKKLKFNTVPIEDLTFTTELSKPASFYKVSTLPHIVVYHKIISRNEE-PPQIHDRIP 920
Query: 840 YVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
YV + + + +EDP +V ++NIP+ Y + ++ + I + + N++ + +S
Sbjct: 921 YVFVASPNATLKSDMAEDPAFVQQHNIPLAVDLYFD-KVVRGAANILQCVFGNSADKAVS 979
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 32/288 (11%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
S ++++ G T + +SVC V + YFY++ G + H Q L + +
Sbjct: 117 SGTVLKLLGRTEDNYSVCVNVFQQKVYFYVADTLGA----MHHIQQTLRAQTHGYS---- 168
Query: 176 VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
I +++K+ + Y + + S D +D L
Sbjct: 169 -------IVIMKKKILREYGVGECNVY----------KVSLTSNKDLNTIIDKLQRAGCE 211
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGE 295
+E+NV RF+ID W + R + S+ EFDC + + +
Sbjct: 212 LFETNVDAVKRFVIDNGFSTFGWYHCKLAHPRLNNRD-SWTDPEFDCSWMQLTFLPERHD 270
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLVTLQGEKQPFIRNVMTLKSCA 353
+ ++LSFDIEC G G FP T D ++Q++ ++ GE P + + L +C
Sbjct: 271 WPNN---QVLSFDIECLGENG-FPNATRDEDMILQISCVLWKTGENTPPRKILFNLGTCD 326
Query: 354 PIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
PI +V +E D+L + +R+++ + + GYNI FD PY+I++
Sbjct: 327 PIPDTEVFECPSEIDMLYLFLTMLRDLNIEFITGYNIANFDFPYIIDR 374
>gi|303313149|ref|XP_003066586.1| DNA polymerase zeta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240106248|gb|EER24441.1| DNA polymerase zeta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1679
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 197/676 (29%), Positives = 323/676 (47%), Gaps = 49/676 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLA 424
T R ++ WR E++ +I Y + +L+ K + H DL T+ R
Sbjct: 992 TGRHMINIWRAMRSELN---LIQYTLENVAF-HLLHKR-IPHYPFHDLTKWFKSTKPRNL 1046
Query: 425 V----YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
V Y + L +LD I E AR+ G+ + SRG KV S + R AK
Sbjct: 1047 VKVVNYFITRTRLNLDILDANELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKP 1106
Query: 481 KNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
+N ++ P+ Q G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST
Sbjct: 1107 ENFILISPSKAQVGQQNALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYNYCYSTF 1166
Query: 539 VTP-EDARKLN---------------LPPECVNKTPSGETFVKSNLQKGILPEILEELLA 582
+ D R N L +N P+G + + ++K +L ++L E+L
Sbjct: 1167 LGRIVDWRGRNKMGFIDYQRQPGLLGLLESQINIAPNGIMYTRPEVRKSLLAKMLTEILE 1226
Query: 583 ARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K +K K D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1227 TRVMVKGGMKANKEDRALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQT 1286
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
R+ +E ++ +V + AEV+YGDTDS+ + T + A +G E A I+
Sbjct: 1287 ARETLEKAIAMIH----SVERW--GAEVVYGDTDSLFIYLKGRTRDEAFDIGEEIAQKIT 1340
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ +P+KL+FEKVY+P +L++KKRY G Y + + + D KGIETVRRD + +
Sbjct: 1341 ASNPRPVKLKFEKVYHPCVLLAKKRYVGYKYESRGQTKPEFDAKGIETVRRDGTPAEQKI 1400
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKG--LTKTGDDYEVKAAHV 817
+ L + D+ +Y + + ++ ++ + K L + +
Sbjct: 1401 EEKALRILFETADLSRVKKYFQKQCAKIMQGKVSIQDFCFAKEVRLGTYSEKGPPPPGAL 1460
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLEN 876
A+RM + D P G+R+PYV+I A G++ +R P +L++ + +D YY+
Sbjct: 1461 ISAKRMLE-DPRLEPQYGERIPYVVISGAPGSRLIDRCVAPEVLLQDPQMELDAEYYISK 1519
Query: 877 QISKPLLRIFEPILKNASK---ELLSGDHTRSISISTPSNSGIMKFA----KRQLSCIGC 929
+ PL RIF + N + E+ R + S+ +++ R SC+ C
Sbjct: 1520 NLIPPLERIFNLVGANIRQWYDEMPKYQRVRRTDNAMISDGTLLRKTLESYMRASSCVVC 1579
Query: 930 KALISNG-TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSR 987
+ + NG LC+HC R + +VQ E + C+ C G ++V C S+
Sbjct: 1580 REKLENGEALCNHCLRRPHLSLMRLRYRVQRAEKKVANIHEVCRSCMGVQWGEEVKCDSK 1639
Query: 988 DCPIFYRRKKAQKDMA 1003
DCP+FY R + +++
Sbjct: 1640 DCPVFYSRTRTTFNLS 1655
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-----NRN 173
+IR+FG T G VC +HG PY YI + + + + L + A RN
Sbjct: 42 VIRVFGATETGQKVCAHIHGAFPYLYIEYRGSLAMEQVKAATRSLHVSIDHALAVSYRRN 101
Query: 174 SKVP--QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
+ P +V HI +V K + Y + F KI + P + +L L G M
Sbjct: 102 AYDPGTAYVAHISLV-KGTPFYGYHVGHKFFFKIYLLNPLHMTRLADLL-----LQGAVM 155
Query: 232 KSFMT-YESNVLFALRFMIDCNIVGGNWIE 260
K + YES++ + ++M D N+ G +I+
Sbjct: 156 KRVLQPYESHMQYIPQWMCDYNLYGCAYID 185
>gi|296423830|ref|XP_002841455.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637695|emb|CAZ85646.1| unnamed protein product [Tuber melanosporum]
Length = 1622
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 192/665 (28%), Positives = 327/665 (49%), Gaps = 60/665 (9%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++GY++ +L+ + H+S + +G+
Sbjct: 959 TGRHMVNIWRAMTAELN---LLGYSMENVVF-HLLHQRIPHYSFRVLTGWYTSGSPLLFG 1014
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
++ + ++ L +LD+ I E AR+ G+ + + RG KV S + R AK +
Sbjct: 1015 KVIKHLVRKVQLDLEILDRQELITRTSEQARLLGIDFASVSGRGSQFKVESMMFRIAKPE 1074
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
+ LV P+ Q G + V+E + FY P+ LDF SLYPS+M+A+N CYST
Sbjct: 1075 SFILVSPSKAQVGQQNALECLPLVMEPFSRFYTSPVVVLDFQSLYPSVMIAHNYCYSTF- 1133
Query: 540 TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK-DPL 598
L L + +N P+G ++K ++K +L ++L E+L R K +K K D
Sbjct: 1134 -------LELCEKDINIAPNGMMYIKQTIRKSLLAKMLTEILDTRVMVKNGMKRDKHDKA 1186
Query: 599 EKAVLDGRQLALKISANSVYGFTGAT-VGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFT 657
+ +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+++E +L++D
Sbjct: 1187 LQKLLNSRQLALKLIANVTYGYTSASHSGRMPCTEIADSIVQTGREILEKAIRLIQDDPN 1246
Query: 658 TVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYP 717
+AEV+YGDTDS+ + T + A ++G E A ++ +PIKL+FEKVY P
Sbjct: 1247 ------WDAEVVYGDTDSLFIHLEGRTKDEAFRIGEEIAARVTEANPRPIKLKFEKVYLP 1300
Query: 718 YLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLHKILV-DRDIPG 775
+L++KKRY G + E+ + D KGIETVRRD + ++ E KIL +D+
Sbjct: 1301 CVLLAKKRYVGFKYEYREQAEPDFDAKGIETVRRDGT-PAEQMIEEAALKILFRTKDLSQ 1359
Query: 776 AVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVG 835
Y + + ++ + + L +G++ +LA + ++D AP
Sbjct: 1360 VKAYCQREWTKIMREKA-VRLGTYAEGVS--------LPPGAQLAAKRVEKDPENAPQYA 1410
Query: 836 DRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNAS 894
+R+PYV+I + G +R+ + +L + + +D+ YY+ I PL RIF + N
Sbjct: 1411 ERIPYVVIAGSPGQTLADRTIEVNDLLASPELSLDSEYYICKNIIPPLERIFNLVGANVR 1470
Query: 895 K---ELLSGDHTRSI------SISTPSNSGIMKFAKRQL------------SCIGCKALI 933
+ E+ H R + + +T +G K R + + GCK
Sbjct: 1471 QWYDEMPKYKHLRKLIKYNDSAAATSGGTGAQKEKSRAIIESYMTKSSNICAVCGCKTSR 1530
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSL-HQDVLCTSRDCPIF 992
+ +C C +Q+ E L T C+ C+GS ++V CTS+DC ++
Sbjct: 1531 TKNNICKDCTQNRDASIIHVRTQLARAEKRVLDLQTVCRSCEGSSPGEEVACTSQDCAVY 1590
Query: 993 YRRKK 997
Y R++
Sbjct: 1591 YSRRR 1595
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 54/225 (24%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCP-QGMGPDDISHFHQILEGRMREANRNSKVP 177
I+R+FG T G VC +HG PY Y+ P + + P+D + G R K P
Sbjct: 38 IVRVFGATETGQKVCAHIHGAFPYLYVEYPGKSLMPED-DRAMGLSAG--RSIRSQEKPP 94
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFL-KIVVALPTMVASCRGILDRGIQLDGLGMKSFMT 236
+FV HI +V + + +Y F KI + P M RG L R +Q G+ + F
Sbjct: 95 RFVAHISLV--KGVPFYGFHVGWKFYCKIYLFNPHM----RGRLARILQSGGVLSRVFQP 148
Query: 237 YESNVLFALRFMIDCNIVGGNWIE--------------------------------VPVG 264
+E+++ + +FMID N+ G +IE +P
Sbjct: 149 HEAHIQYIPQFMIDFNLNGCGFIECDKVLFRGEIPDADEIGEQHIWHNKSIPEVSILPES 208
Query: 265 KYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDI 309
++++ SYC LE D DI +R K R L FD
Sbjct: 209 QFQRQ----SYCTLEVDIHVRDIFNR-------KQVSARPLHFDF 242
>gi|388853211|emb|CCF53077.1| probable catalytic subunit of DNA polymerase zeta UPR-1 [Ustilago
hordei]
Length = 1689
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 209/708 (29%), Positives = 325/708 (45%), Gaps = 74/708 (10%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLA 424
T R L WR E+ ++ N+C + L + + H ++ +G E R+
Sbjct: 958 TGRHTLNLWRLMKGELTLNLYTLENVC-YHLLHRRMPKFSHQTLTQWFVSGRVELMRKAL 1016
Query: 425 VYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV 484
+Y + L ++ + F+ E AR+ G+ ++SRG KV S +LR AK +N V
Sbjct: 1017 LYFVDTVELELEIIAESEFVLRTAEFARIYGIDFFSVISRGSQFKVESIMLRIAKPENFV 1076
Query: 485 I--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE 542
+ P+ Q G + ++E ++ FY+ P+ LDF SLYPSIM+AYNLCYST +
Sbjct: 1077 LISPSRAQVGKQNAAECLPLIMEPQSAFYKGPLIVLDFQSLYPSIMIAYNLCYSTCLGRV 1136
Query: 543 DARK----------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKR 586
K L+L + VN + +G FVK +++K +L ++L E+L R
Sbjct: 1137 AGFKGTSKFGVVDYAPPKGLLSLLQDDVNISSNGLLFVKPHVRKSLLAKMLSEILDTRVM 1196
Query: 587 AKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQM 644
K +K K D + + + RQL+LK+ AN YG+T A+ G++PC+EI+ ++ GR+
Sbjct: 1197 VKGSMKGTKADKSFQRIQNARQLSLKLLANVTYGYTSASFSGRMPCVEIADAIVQTGRET 1256
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
+E L+ G E A+V+YGDTDS+ V T E A +LG AD ++
Sbjct: 1257 LERAMDLIN------GTEEWGAQVVYGDTDSLFVYLPGRTKEEAFRLGNLIADKVTSLNP 1310
Query: 705 KPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTEC 763
+P+KL+FEKVY P +L++KKRY G Y T E+ D KGIETVRRD ++ ++ C
Sbjct: 1311 RPVKLKFEKVYLPSVLLAKKRYVGFKYETLDEREPGFDAKGIETVRRDFHPAIQRMLEAC 1370
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA---HVELA 820
+ + RD+ Y++ +L R+ + K + K G Y K A ++
Sbjct: 1371 IRILFRSRDLSIVKSYLQRQWRKILEGRVSPQDFIFAKEV-KLG-SYSDKVAPPPGAAVS 1428
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQIS 879
R D + P G+RVPY+I + AK +++ P L+N + I+ YY+ I
Sbjct: 1429 SRRMLADPRSEPQYGERVPYIISQGEPRAKLNQQAVSPDAFLKNPQLQINAMYYITRTII 1488
Query: 880 KPLLRIFE-------------PILKNA---------------------SKELLSGDHTRS 905
PL R+F P NA K L + T S
Sbjct: 1489 PPLARVFNLLGADVEGWFHEMPKPNNAYWNKRPTAALLSAVLEQQRLEGKALDEEEPTSS 1548
Query: 906 ISISTPSNSGIMKFAKRQLSCIGCKA--LISNGT---LCSHCKGREAELYCKTVSQVQEL 960
SI P + S + L SN T +C C+ + S++ L
Sbjct: 1549 PSIPKPIKTATSTTLTTLNSHYATETCLLCSNRTEALVCIECRQSPTDSMHSVASKLHRL 1608
Query: 961 EVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKL 1007
E + C C G + V C S DCP Y++ K +K + L
Sbjct: 1609 EAQAVAIDRICSTCAGMERPEPVECVSLDCPYTYQKTKVKKALEYTTL 1656
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDD-ISHFHQILEGRMREA------N 171
I+RIFG T G VC +H PY Y+ + P D + + H++ GR A
Sbjct: 66 ILRIFGATPAGQRVCLHIHNVYPYCYVQYKGSLDPGDALRYIHRL--GRELNAAMAVSLR 123
Query: 172 RNSKVP---QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDG 228
RN P QF+ I + + + Y S FLKI P+ IL+ G G
Sbjct: 124 RNPDDPEANQFIAAIHLCKGVNFYGYHVGYSY-FLKISFVDPSHNYRIATILESG----G 178
Query: 229 LGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV 261
+ F +E ++ + L+FM+D NI G +++++
Sbjct: 179 VMKTIFQPFEIHIRYQLQFMLDYNIFGCDYVDL 211
>gi|213401351|ref|XP_002171448.1| DNA polymerase zeta catalytic subunit [Schizosaccharomyces japonicus
yFS275]
gi|211999495|gb|EEB05155.1| DNA polymerase zeta catalytic subunit [Schizosaccharomyces japonicus
yFS275]
Length = 1464
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 201/679 (29%), Positives = 326/679 (48%), Gaps = 70/679 (10%)
Query: 367 RDVLLAWRDFIREVDPDVMIG-YNICKFDL----PYLIEKEDVHHSIISDLQNGNAETRR 421
R +L WR +M G YN+ + L ++ + + H+S +DL A ++
Sbjct: 783 RHLLNIWR---------LMKGEYNLFNYSLESVVSHVFDTQTPHYSQ-NDLNTLWASSQL 832
Query: 422 R----LAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRK 477
R Y L R+L I E AR+ GV ++SRG KV S L R
Sbjct: 833 RDKLHFVQYHLSRVSYDLRILVSSAVITKVREQARIIGVDFYSVISRGSQFKVESILFRI 892
Query: 478 AKQKNLVIPNVKQAGSEQGTYEGAT-----VLEARAGFYEKPIATLDFASLYPSIMMAYN 532
AK +N ++P+ G +Q T + A VLE + ++ P+A LDF SLYPSI++A+N
Sbjct: 893 AKSENYILPS---PGPQQMTEQNALECLPLVLEPQTNLFKNPVAVLDFQSLYPSIIIAFN 949
Query: 533 LCYSTLV----TPEDARKLNLP-----PECVNK-------TPSGETFVKSNLQKGILPEI 576
LC+ST + + A++L P + +P+G +V+ N++K +L +
Sbjct: 950 LCFSTCLGYVRNIDKAQRLGFTFYQADPTLLQALKDDIYISPNGVAYVQKNVRKSLLARM 1009
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISS 635
LEEL+ R K+ +K+ D +L+GRQLALK+ AN YG+T A+ G++PC EI+
Sbjct: 1010 LEELIDTRLLLKSGMKDCTDANIHRILNGRQLALKLIANVTYGYTSASFSGRMPCSEIAD 1069
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
++ GR+++E + ++ + A V+YGDTDS+ V+ T E A K +
Sbjct: 1070 TIVQTGREILERSINIIN------ATEQFEARVVYGDTDSLFVELPGATKEEAFKRAQLL 1123
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCL 754
A+ IS P+KL+FEKVY P L++KKRY G + + +K K D KGIETVRRD
Sbjct: 1124 ANKISSALPSPLKLKFEKVYLPCFLLAKKRYVGYSFESLSDKKPKFDAKGIETVRRDGTP 1183
Query: 755 LVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL-TKTGDDYEVK 813
+ + ++ CL + D+ + S ++ NR+ + +K + T D
Sbjct: 1184 VQQKVLQACLCALFDTMDLSSVKRVFLEQCSSIVENRVSIMDFCFSKEVYLGTYKDATTA 1243
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDP-IYVLENNIPIDTHY 872
L+ R+ +DA P G+RVPYVI+ A +RS P +V ++ + +D Y
Sbjct: 1244 PPGAALSLRLMLQDARMEPQYGERVPYVIVAAPPNTTLVKRSVSPEEFVNDSTLHLDLDY 1303
Query: 873 YLENQISKPLLRIFEPILKNAS---------KELLSGDHTRSISISTPSNSGIMKFAKRQ 923
Y+ + I PL R+ + +A K+LL+ D + + + + +
Sbjct: 1304 YIRHNIIPPLDRMLNVLGASAKLWYDQMPKVKKLLT-DSVSTKASAVGQGRTLDQILHTM 1362
Query: 924 LSCIGCKALIS------NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGS 977
L C+ K ++ LC C+ + T+ + +LF RL C+ C
Sbjct: 1363 LCCLCLKNPVTAVPNAPTSLLCEDCRQHSDKALMNTLYNLNSSSLLFNRLSHICEGCSRI 1422
Query: 978 LHQD-VLCTSRDCPIFYRR 995
D + C S++C I+Y R
Sbjct: 1423 SSVDPIYCNSQNCCIYYER 1441
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 22/176 (12%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYIS-CPQGMGPDDISHFHQILEGRMREANR-- 172
S ++RIFG+T G S+CC +H PY +I P+ DD+ F + L+ + E
Sbjct: 38 SLPVLRIFGLTEAGDSICCFLHNCFPYLFIDFVPEEH--DDLIQFLKQLKQFIEETLSRS 95
Query: 173 ----NSKVPQFVRHIEMVQKRSIMYYQQQKS-QPFLKIVVALPTMVASCRGILDRGIQLD 227
NS+V Q V +I++V + I +Y + F KI + P + + +G L
Sbjct: 96 LHLDNSRV-QLVYNIQLV--KGIPFYGYHVGWRLFCKISLFNPNHINKLADLFRQGRILK 152
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY-----RKTAKTLSYCQL 278
S YE++V + L+F+ID N+ G + +E+ + ++T KT C+L
Sbjct: 153 N----STRVYEAHVPYLLQFLIDHNLYGCDCMELDENRIELVTDKETRKTHCSCEL 204
>gi|392864138|gb|EAS35055.2| polymerase zeta subunit [Coccidioides immitis RS]
Length = 1679
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 197/676 (29%), Positives = 322/676 (47%), Gaps = 49/676 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLA 424
T R ++ WR E+ +I Y + +L+ K + H DL T+ R
Sbjct: 992 TGRHMINIWRAMRSELS---LIQYTLENVAF-HLLHKR-IPHYPFHDLTKWFKSTKPRNL 1046
Query: 425 V----YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
V Y + L +LD I E AR+ G+ + SRG KV S + R AK
Sbjct: 1047 VKVVNYFITRTRLNLDILDANELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKP 1106
Query: 481 KNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
+N ++ P+ Q G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST
Sbjct: 1107 ENFILISPSKAQVGQQNALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYNYCYSTF 1166
Query: 539 VTP-EDARKLN---------------LPPECVNKTPSGETFVKSNLQKGILPEILEELLA 582
+ D R N L +N P+G + + ++K +L ++L E+L
Sbjct: 1167 LGRIVDWRGRNKMGFIDYQRQQGLLGLLESQINIAPNGIMYTRPEVRKSLLAKMLSEILE 1226
Query: 583 ARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K +K K D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1227 TRVMVKGGMKANKEDRALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQT 1286
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
R+ +E ++ +V + AEV+YGDTDS+ + T + A +G E A I+
Sbjct: 1287 ARETLEKAIAMIH----SVERW--GAEVVYGDTDSLFIYLKGRTRDEAFDIGEEIAQKIT 1340
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ +P+KL+FEKVY+P +L++KKRY G Y + + + D KGIETVRRD + +
Sbjct: 1341 ASNPRPVKLKFEKVYHPCVLLAKKRYVGYKYESRGQTKPEFDAKGIETVRRDGTPAEQKI 1400
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKG--LTKTGDDYEVKAAHV 817
+ L + D+ +Y + + ++ ++ + K L + +
Sbjct: 1401 EEKALRILFETADLSRVKKYFQKQCAKIMQGKVSIQDFCFAKEVRLGTYSEKGPPPPGAL 1460
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLEN 876
A+RM + D P G+R+PYV+I A G++ +R P +L++ + +D YY+
Sbjct: 1461 ISAKRMLE-DPRLEPQYGERIPYVVISGAPGSRLIDRCVAPEVLLQDPQMELDAEYYISK 1519
Query: 877 QISKPLLRIFEPILKNASK---ELLSGDHTRSISISTPSNSGIMKFA----KRQLSCIGC 929
+ PL RIF + N + E+ R + S+ +++ R SC+ C
Sbjct: 1520 NLIPPLERIFNLVGANIRQWYDEMPKYQRVRRTDNAMISDGTLLRKTLESYMRASSCVVC 1579
Query: 930 KALISNG-TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSR 987
+ + NG LC+HC R + +VQ E + C+ C G ++V C S+
Sbjct: 1580 REKLENGEALCNHCLRRPHLSLMRLRYRVQRAEKKVANIHEVCRSCMGVQWGEEVKCDSK 1639
Query: 988 DCPIFYRRKKAQKDMA 1003
DCP+FY R + +++
Sbjct: 1640 DCPVFYSRTRTTFNLS 1655
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-----NRN 173
+IR+FG T G VC +HG PY YI + + + + L + A RN
Sbjct: 42 VIRVFGATETGQKVCAHIHGAFPYLYIEYRGSLAVEQVKAATRSLHVSIDHALAVSYRRN 101
Query: 174 SKVP--QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
+ P +V HI +V K + Y + F KI + P + +L L G M
Sbjct: 102 AYDPGTAYVAHISLV-KGTPFYGYHVGHKFFFKIYLLNPLHMTRLADLL-----LQGAVM 155
Query: 232 KSFMT-YESNVLFALRFMIDCNIVGGNWIE 260
K + YES++ + ++M D N+ G +I+
Sbjct: 156 KRVLQPYESHMQYIPQWMCDYNLYGCAYID 185
>gi|119192044|ref|XP_001246628.1| hypothetical protein CIMG_00399 [Coccidioides immitis RS]
Length = 1525
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 197/676 (29%), Positives = 322/676 (47%), Gaps = 49/676 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLA 424
T R ++ WR E+ +I Y + +L+ K + H DL T+ R
Sbjct: 838 TGRHMINIWRAMRSELS---LIQYTLENVAF-HLLHKR-IPHYPFHDLTKWFKSTKPRNL 892
Query: 425 V----YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
V Y + L +LD I E AR+ G+ + SRG KV S + R AK
Sbjct: 893 VKVVNYFITRTRLNLDILDANELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKP 952
Query: 481 KNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
+N ++ P+ Q G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST
Sbjct: 953 ENFILISPSKAQVGQQNALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYNYCYSTF 1012
Query: 539 VTP-EDARKLN---------------LPPECVNKTPSGETFVKSNLQKGILPEILEELLA 582
+ D R N L +N P+G + + ++K +L ++L E+L
Sbjct: 1013 LGRIVDWRGRNKMGFIDYQRQQGLLGLLESQINIAPNGIMYTRPEVRKSLLAKMLSEILE 1072
Query: 583 ARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K +K K D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1073 TRVMVKGGMKANKEDRALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQT 1132
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
R+ +E ++ +V + AEV+YGDTDS+ + T + A +G E A I+
Sbjct: 1133 ARETLEKAIAMIH----SVERW--GAEVVYGDTDSLFIYLKGRTRDEAFDIGEEIAQKIT 1186
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+ +P+KL+FEKVY+P +L++KKRY G Y + + + D KGIETVRRD + +
Sbjct: 1187 ASNPRPVKLKFEKVYHPCVLLAKKRYVGYKYESRGQTKPEFDAKGIETVRRDGTPAEQKI 1246
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKG--LTKTGDDYEVKAAHV 817
+ L + D+ +Y + + ++ ++ + K L + +
Sbjct: 1247 EEKALRILFETADLSRVKKYFQKQCAKIMQGKVSIQDFCFAKEVRLGTYSEKGPPPPGAL 1306
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLEN 876
A+RM + D P G+R+PYV+I A G++ +R P +L++ + +D YY+
Sbjct: 1307 ISAKRMLE-DPRLEPQYGERIPYVVISGAPGSRLIDRCVAPEVLLQDPQMELDAEYYISK 1365
Query: 877 QISKPLLRIFEPILKNASK---ELLSGDHTRSISISTPSNSGIMKFA----KRQLSCIGC 929
+ PL RIF + N + E+ R + S+ +++ R SC+ C
Sbjct: 1366 NLIPPLERIFNLVGANIRQWYDEMPKYQRVRRTDNAMISDGTLLRKTLESYMRASSCVVC 1425
Query: 930 KALISNG-TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSR 987
+ + NG LC+HC R + +VQ E + C+ C G ++V C S+
Sbjct: 1426 REKLENGEALCNHCLRRPHLSLMRLRYRVQRAEKKVANIHEVCRSCMGVQWGEEVKCDSK 1485
Query: 988 DCPIFYRRKKAQKDMA 1003
DCP+FY R + +++
Sbjct: 1486 DCPVFYSRTRTTFNLS 1501
>gi|349576978|dbj|GAA22147.1| K7_Cdc2ap, partial [Saccharomyces cerevisiae Kyokai no. 7]
Length = 433
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 203/364 (55%), Gaps = 20/364 (5%)
Query: 46 DETLLPEDEESLILRDIEQ-RQDFASR----LAKWARPPLSSGYVSQCQSIMFQQLDIDY 100
D L+ ES +++ Q D A + L+ + R L + + I FQQ+D +
Sbjct: 63 DTDLMGTQLESTFEQELSQMEHDMADQEEHDLSSFERKKLPTDFDPSLYDISFQQIDAEQ 122
Query: 101 VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFH 160
+ + ++ ++ ++R FGVT EGHSV C V GF+ Y Y+ P +D +
Sbjct: 123 SVLNGIKD-----ENTSTVVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSSDANDQEQIN 177
Query: 161 QILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGIL 220
+ + N + IE+V K+SI Y PF KI V P MV R
Sbjct: 178 KFVH------YLNETFDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAF 231
Query: 221 DRG-IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR--KTAKTLSYCQ 277
+RG + + TY+ N+ + LR M+DC IVG +WI +P GKY + +S CQ
Sbjct: 232 ERGHLSFNSWFSNGTTTYD-NIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNNRVSSCQ 290
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 337
LE Y ++I+ EG++S AP RI+SFDIECAGR G FPEP +DPVIQ+AN+V++ G
Sbjct: 291 LEVSINYRNLIAHPAEGDWSHTAPLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAG 350
Query: 338 EKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPY 397
K+PFIRNV TL +C+PI G + S TE ++L WR+FI +VDPDV+IGYN FD+PY
Sbjct: 351 AKKPFIRNVFTLNTCSPITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPY 410
Query: 398 LIEK 401
L+ +
Sbjct: 411 LLNR 414
>gi|254583932|ref|XP_002497534.1| ZYRO0F07766p [Zygosaccharomyces rouxii]
gi|238940427|emb|CAR28601.1| ZYRO0F07766p [Zygosaccharomyces rouxii]
Length = 1482
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 187/631 (29%), Positives = 304/631 (48%), Gaps = 54/631 (8%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y + + RLL K +I VE AR+TG+ + RG KV S L R KQ++ +
Sbjct: 862 YWMTRVRMNIRLLQKQDYIARIVEQARLTGIDFYSVYYRGSQYKVESILFRLCKQEDFLS 921
Query: 486 --PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT--- 540
P+ KQ +++ V+E + FY+ P+ LDF SLYPSIM+AYNLCYST+V
Sbjct: 922 LSPSRKQVKNQRALECVPLVMEPESAFYKSPVVVLDFQSLYPSIMIAYNLCYSTMVGRVR 981
Query: 541 -------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAAR--- 584
P N E T +G +VKS+ + L +LE+LL R
Sbjct: 982 DLDFKNELGVTKFPFPKNAFNTLEEHTRITANGIVYVKSSYRNSTLARMLEDLLYTRRLV 1041
Query: 585 KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQ 643
K+ +D+ L+K +L+ RQLALK+ AN YG+T A+ G++PC +++ ++ GR+
Sbjct: 1042 KKTMSDVGSKNSSLQK-LLNRRQLALKLIANVTYGYTSASFSGRMPCSDLADTIVQTGRE 1100
Query: 644 MIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTF 703
++E + +E + A+VIYGDTDS+ + A +G E A ++
Sbjct: 1101 ILEKAIEFIE------ANEKWGAKVIYGDTDSLFIYLPGKCRYEAHNIGEEMATEVTKRN 1154
Query: 704 IKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTE 762
PI L+FEKVY+P +L+SKKRY G + P + + D KGIETVRRD + +V +
Sbjct: 1155 RSPISLKFEKVYHPSILLSKKRYVGFMYELPSQLQPIFDAKGIETVRRDGHPAQQKIVKK 1214
Query: 763 CLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELA 820
C+ + +D+ +YV+ + +++ L +G+ + G K A +A
Sbjct: 1215 CIQILFRTKDLSQVKKYVQEQFVKIHQSKVSLQDFCFARGV-RLGSYKSEKTAPPGAVVA 1273
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDP-IYVLENNIPIDTHYYLENQIS 879
R ++ D + P +RVPYV+ + + G +R P ++ + + +D+ YY+E +
Sbjct: 1274 TRQKEHDHRSRPQYKERVPYVVARGSVGQILRDRCISPEEFLTDETLELDSDYYIEKTLV 1333
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGC-KALISNGTL 938
PL R+F + N ++ + + TR+ S + ++ LSCI C + L
Sbjct: 1334 PPLSRLFNIMGVNVAE--WAFEVTRNQSSPAHREAKNIEKVILNLSCINCGNDTTTKSQL 1391
Query: 939 CSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV---------LCTSRDC 989
C C+ + + + E + T C+ C QD LC S DC
Sbjct: 1392 CEKCQMESLQTSGNLLERRNYREREIKTINTVCRICSYRYTQDAGEMGGQVASLCESHDC 1451
Query: 990 PIFYRRKKA--------QKDMAEAKLQLDRW 1012
P+++ R KA + +AEA ++ W
Sbjct: 1452 PVYFSRVKAAGYINSTVNRRIAEALNSINHW 1482
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 27/180 (15%)
Query: 98 IDYVIGDSNRELLPLSS-GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPD-- 154
+D G+S LP++ S +IRI+G GH C VHG PY +I G D
Sbjct: 37 LDTAHGNS----LPMNQYSSVPVIRIYGCLPSGHQAVCHVHGIFPYIFIGY-DGKKQDSS 91
Query: 155 -DISH----FHQILEGRMRE-ANRNSKVP--------QFVRHIEMVQKRSIMYYQQQKSQ 200
D++H H++LE + +E A +N KVP ++ ++ +V+ + S
Sbjct: 92 TDMNHRCAKLHRLLESKCQEFAGKNEKVPSGQPLGALSYIANVSVVKAVPFYGFHVGWSL 151
Query: 201 PFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIE 260
F KI + P +V + G K +YE+++ + L+F +D N+ G +W++
Sbjct: 152 -FYKISLLNPGLVNKFSDWIRDGKMFG----KRVESYETHLPYLLQFSVDFNLFGCSWMD 206
>gi|366991433|ref|XP_003675482.1| hypothetical protein NCAS_0C01250 [Naumovozyma castellii CBS 4309]
gi|342301347|emb|CCC69115.1| hypothetical protein NCAS_0C01250 [Naumovozyma castellii CBS 4309]
Length = 1473
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 215/700 (30%), Positives = 328/700 (46%), Gaps = 67/700 (9%)
Query: 365 TERDVLLAWRDFIREVDPDVM----IGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETR 420
T R V+ WR E++ I YN+ LP+ D + +D GN
Sbjct: 789 TGRHVINIWRVLRSELNLTQYTIENIVYNVLHERLPHF--SFDTLTKLWTD--TGNLCGL 844
Query: 421 RRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
+ + Y L A + RLL K FI +E AR+ G+ + RG KV S L+R K
Sbjct: 845 KTVIFYWLTRARMNVRLLQKQEFIGKTMEQARLIGIDFHSVFYRGSQFKVESFLIRICKS 904
Query: 481 KNLVIPNV--KQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
++ V+ + KQ ++ V+E + FY+ P+ LDF SLYPSIM+AYN CYST+
Sbjct: 905 ESYVLISASKKQVRRQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIAYNYCYSTM 964
Query: 539 VT-----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELL 581
+ + L L V P+G + KS ++K L ++L E+L
Sbjct: 965 IGRVRNLTTHGNELGVATFSLEKNLLRLLENDVTIAPNGVVYAKSTVRKSTLAKMLTEIL 1024
Query: 582 AAR---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSV 637
R K+ ++L + + L + VL+ +QLALK+ AN YG+T A+ G++PC +++ SV
Sbjct: 1025 DIRVMVKKTISELGKGNERLRR-VLNNKQLALKLLANVTYGYTSASFSGRMPCSDLADSV 1083
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
GR+ +E ++E + A+V+YGDTDS+ V T E A K G E A
Sbjct: 1084 VQTGRETLEKAISIIE------SNEDWGAKVVYGDTDSLFVYLPGKTKEEAFKFGNEMAV 1137
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLV 756
++ KP+ L+FEKVY+P +L+SKKRY G + N + D KGIETVRRD
Sbjct: 1138 AVTKRNPKPVFLKFEKVYHPCILVSKKRYVGYSYENVGQTVPYFDAKGIETVRRDGH-PA 1196
Query: 757 KNLVTECLHKILVD-RDIPGAVQYVKSTISDLLMNRMDLSLLVITK--GLTKTGDDYEVK 813
+ +TE KIL D +DI +YV+S + + R+ + K L D
Sbjct: 1197 QQKITEKALKILFDSKDISQVKRYVQSQFTKVQEGRVSVQDFCFAKEVKLGTYKSDKTAP 1256
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHY 872
A V +A ++ + D P +RVPY+++K G ERS P+ N ++ +D+ Y
Sbjct: 1257 AGAV-VATKLMENDHRAEPQYKERVPYLVVKGKSGQILRERSISPLEFFANPDLELDSEY 1315
Query: 873 YLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKA- 931
Y+ + PL R+F I + S+ + + ST +N I K L C CK
Sbjct: 1316 YITKTLVPPLSRLFNVIGIDVSEWAYELKKYKK-AHSTVNNKKIEKIGNLLL-CSHCKEP 1373
Query: 932 --LISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD-------- 981
I + LC +C E + Q + + +L CQ C ++D
Sbjct: 1374 YNKIDDNVLCDNCLSHPLETTSDLLYQDLQRQFELEKLKLICQTCSYRYNKDAGLIGAEI 1433
Query: 982 -VLCTSRDCPIFYRRKKAQKDMAEAK--------LQLDRW 1012
C S DCPIFY + K+ K + ++ +LD W
Sbjct: 1434 STHCNSYDCPIFYSKFKSLKYLQSSEGKERVRTLERLDEW 1473
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 21/166 (12%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFY------ISCPQGMGPDDISHFHQILEGRMREANR 172
+IRI+G GH V C +HG PY + +S + + ++LE ++ + +
Sbjct: 52 VIRIYGSLPSGHQVLCHIHGVLPYIFVQYNGEVSDSNAIMNQKCAQLQELLEKQISASMK 111
Query: 173 NSKVPQ----------FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDR 222
N K Q ++ ++ V K Y F KI + P+ V +L
Sbjct: 112 NRKNNQQSASNASSLEYIANVS-VTKAVPFYAFHVGWTLFYKISILNPSFVNRIADLLRD 170
Query: 223 GIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRK 268
G L + YE+++ + L+F D N+ G +WI++ +RK
Sbjct: 171 G----NLNLAHNEVYEAHIPYLLQFSADFNLFGCDWIKLEKCYFRK 212
>gi|409083516|gb|EKM83873.1| hypothetical protein AGABI1DRAFT_32464 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1543
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 197/631 (31%), Positives = 292/631 (46%), Gaps = 66/631 (10%)
Query: 432 YLPQR------LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
YL QR +L+ + E AR+ GV ++SRG KV S + R AK +N V+
Sbjct: 891 YLIQRNCTTLQILEATELVTKTAEFARIFGVDFHSVISRGSQFKVESFMFRIAKSENFVL 950
Query: 486 --PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---VT 540
P+ G + ++E + FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 951 LSPSKSDVGLQNAAECMPLIMEPMSAFYTSPLVVLDFQSLYPSVMIAYNYCYSTCLGRIK 1010
Query: 541 PEDAR------KLNLPP-------ECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
P L+L P E + P+G +VKSN++KG+L +L ELL R
Sbjct: 1011 PFQGNYKFGVTNLDLGPGILDALQEHITVAPNGIMYVKSNVRKGLLGRMLVELLNTRVMV 1070
Query: 588 KADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIE 646
K LK AK VL RQLALK AN YG+T AT G++P +EI+ S+ GR+ +E
Sbjct: 1071 KQALKSAKSDKAARVLHARQLALKYIANVTYGYTSATYSGRMPAVEIADSIVQTGRETLE 1130
Query: 647 HTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKP 706
+ G + A+V+YGDTDS+ V T E A ++G E AD ++ P
Sbjct: 1131 KAINFIN------GSGKWGAKVVYGDTDSLFVYLPGKTREQAFRIGNEMADAVTRQNPVP 1184
Query: 707 IKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLH 765
IKL+FEKVY P +L++KKRY G + NP++ + + D KGIETVRRD L + LV L
Sbjct: 1185 IKLKFEKVYLPCVLMAKKRYVGFKYENPDETEPEFDAKGIETVRRDGVLAQRKLVENSLK 1244
Query: 766 KILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL-TKTGDDYEVKAAHVELAERMR 824
+ +D+ Y + ++ N++ + + K + T + +A R
Sbjct: 1245 ILFRTQDLSQVKDYCCRSWYQIMENKVPIQDFIFAKEVRMGTYSEKGPPPPGAVVAARRM 1304
Query: 825 KRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLL 883
D P GDR+PY+I + GA ER+ DP+ ++ + + +D YY+ + PL
Sbjct: 1305 VLDPNDEPQYGDRIPYIISRGEPGALLAERALDPLEMINDPRLQLDALYYITRVLIPPLE 1364
Query: 884 RIFE-------------PILKNASKELLSG---------DHTRSISISTPSNSGIMKFAK 921
R+F P + N EL D R S S+P + + +
Sbjct: 1365 RVFNLVGADVRHWFAEMPKISNTVSELALASPGRRRKVEDSDREESPSSPGRRDLEEHLE 1424
Query: 922 RQLSCIGCK--ALISNGTLCSHC---KGREAELYCKTVSQVQELEVLFGRLWTQCQECQG 976
C+ C + LC C + + +E + ++ C
Sbjct: 1425 NN-QCLVCGEVSFTERTELCEECIFLPQTSLTILGAKTGRREERMLTTHKVCVTCTSIAP 1483
Query: 977 SLHQDVLCTSRDCPIFYRRKKAQK--DMAEA 1005
S + V C DCP FY RK+A+ DM E
Sbjct: 1484 S--EPVECECLDCPWFYARKRAEHKLDMIET 1512
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 78/188 (41%), Gaps = 35/188 (18%)
Query: 94 QQLDIDYVI---GDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYI----- 145
Q IDYV+ G +R P I+RIFG + G C VH PY YI
Sbjct: 5 QIYQIDYVLSPPGPLDRSHYP----RVPILRIFGQSSVGLRTCLHVHQVYPYCYIEYQGD 60
Query: 146 ---------SCPQ--GMGPDDISHFHQILEGRMREA-------NRNSKVPQFVRHIEMVQ 187
SCP + P + + + + + A + NS Q+V + +V+
Sbjct: 61 LDLRHGTFMSCPVFINLRPRTVKQYVRKFKKSLNHAIALSLKRDPNSTKSQYVCAVVLVK 120
Query: 188 KRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRF 247
+ Q S PFLKI++ P ++ IL G + + F YES++ F L+F
Sbjct: 121 GVKFYGFHSQYS-PFLKIILLDPRLMNRVATILQSGSVMS----QRFPVYESHLSFTLQF 175
Query: 248 MIDCNIVG 255
M D + G
Sbjct: 176 MCDFGLYG 183
>gi|414888041|tpg|DAA64055.1| TPA: hypothetical protein ZEAMMB73_677675 [Zea mays]
Length = 1602
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 189/648 (29%), Positives = 305/648 (47%), Gaps = 72/648 (11%)
Query: 415 GNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQL 474
G R R Y A + +++++ + E+ARV G+ +LSRG +V S L
Sbjct: 946 GPGRGRHRCIEYISNRARINLEIMNQMDLVNRTSELARVFGIDFFSVLSRGSQYRVESML 1005
Query: 475 LRKAKQKNL--VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYN 532
LR A +N + P +Q S+ V+E + FY P+ LDF SLYPS+++AYN
Sbjct: 1006 LRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESAFYPDPVVVLDFQSLYPSMIIAYN 1065
Query: 533 LCYSTL---VTPEDARKLNLPPECVNK------------TPSGETFVKSNLQKGILPEIL 577
LCYST V P + L + + TP+G +V+ ++KG+LP +L
Sbjct: 1066 LCYSTCLGKVFPSKSDVLGVSSYSADPHTLVDLKNQLLLTPNGVLYVQPEIRKGVLPRLL 1125
Query: 578 EELLAAR---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEI 633
EE+L+ R K+A L ++ L + + + RQLALK+ AN YG+T A G++PC E+
Sbjct: 1126 EEILSTRIMVKQAMKKLSPSQQVLHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAEL 1184
Query: 634 SSSVTSYGRQMIEHTKKLVEDKFTTVGGYEH---NAEVIYGDTDSVMVQFGVPTVEAAMK 690
+ S+ GR+ +E V +H A V+YGDTDS+ V + E A +
Sbjct: 1185 ADSIVQCGRRTLETAISFVN---------QHPLWKARVVYGDTDSMFVLLKGRSREEAFR 1235
Query: 691 LGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVR 749
+G+E A I+ P+ L+FEKVY P L++KKRY G + +PE+ + + D KGIETVR
Sbjct: 1236 IGKEIASSITAMNPDPVTLKFEKVYQPCFLLTKKRYVGYSYESPEQNEPVFDAKGIETVR 1295
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD C V ++ + + ++D+ Y++ + +L ++ + + K + + G
Sbjct: 1296 RDTCPAVAKILERSIRIMFEEQDLTKVRTYLERQWTHILSGKVSILDFIFAKEV-RLG-T 1353
Query: 810 YEVKAAHVE----LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 865
Y +A+ + +A + D P +RVPYV+I GA+ + DP +LE
Sbjct: 1354 YSARASTLPPAAIVATKAMLSDPRAEPRYAERVPYVVIHGEPGARLADMVIDPYGLLEVG 1413
Query: 866 IP--IDTHYYLENQISKPLLRIF---------------EPILKNASKELLSGDHTR---- 904
P ++ YY+ QI L R+F PI +K + H
Sbjct: 1414 SPYRLNEQYYITKQIIPALQRVFGLLGADLNKWFNEMPRPIRSTLAKRQFAAAHGSFSRD 1473
Query: 905 ------SISISTPSNSGIMKFAKRQLSCIGCKALISNG-TLCSHCKGREAELYCKTVSQV 957
++ T + G + C C +I + C++C EA + +
Sbjct: 1474 GSFIRLGLNNKTSAKGGRIDTYYMSSHCSICGDMIQGSESFCNNCLKSEAVVATVVAGRT 1533
Query: 958 QELEVLFGRLWTQCQECQGS---LHQDVLCTSRDCPIFYRRKKAQKDM 1002
+LE L C C G+ + V C S CP+FY R+K Q+++
Sbjct: 1534 SKLEREIQHLAAICGHCGGADWIVESGVKCISLACPVFYERRKVQREL 1581
>gi|392576217|gb|EIW69348.1| hypothetical protein TREMEDRAFT_30704 [Tremella mesenterica DSM 1558]
Length = 1864
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 299/610 (49%), Gaps = 36/610 (5%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R+ Y L+ + ++D I E ARV GV + ++ RG KV S + R AK +
Sbjct: 1252 RVIKYLLQRVVMYMEMVDAAEIITKNAEFARVFGVDFASVMFRGSQYKVESFMFRIAKPE 1311
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-L 538
+ V+ P+ +Q G + + + E + FY PI LDF SLYPS+M+AYN+C+ST L
Sbjct: 1312 SFVLVSPSKQQVGLQNAPFAVPLIAEPESQFYTHPILVLDFQSLYPSVMIAYNICFSTCL 1371
Query: 539 VTPEDARKLN----------------LPPECVNKTPSGETFVKSNLQKGILPEILEELLA 582
E R + L TP+G FVK ++K +L ++L E+L
Sbjct: 1372 GRVEKFRGTDKFGFTELKVDDGVLELLKDYLTAVTPNGMIFVKPAVRKSLLSKMLGEILD 1431
Query: 583 ARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K +K A+ D +L+ RQL LK+ AN YG+T AT G++PCIE++ S+
Sbjct: 1432 TRVMVKQAMKGARGDKSLLQLLNARQLGLKLMANVTYGYTSATYSGRMPCIEVADSIVQT 1491
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
GR+ +E ++++ A+V+YGDTDS+ V T + A +G + AD ++
Sbjct: 1492 GRETLEKAQEMIHSNAA------WGAQVVYGDTDSLFVALPGKTKDQAFVIGNQIADAVT 1545
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNL 759
KP+KL+FEKVY +L++KKRY G + +P++ + + D KGIET+RRD +
Sbjct: 1546 AANPKPVKLKFEKVYMGSVLMAKKRYVGFKYEHPDETEPVFDAKGIETIRRDGFPAQGKI 1605
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVE 818
CL + ++D+ ++ + + +L R+ L ++ K + + D V
Sbjct: 1606 EEVCLKMLFRNQDLSQIKEFCRQEWTKILQGRISLQDFIVAKEVRLGSYSDKGVPPPGAA 1665
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQ 877
+A R +D P +RVPYV I A+G + +R+ P +L N ++ ID YY+ N
Sbjct: 1666 VAYRRILKDPRDEPQYAERVPYV-ISNAEGRRLIDRARTPEEMLANRSLGIDAEYYIRNL 1724
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAK--RQLSCIGCKALISN 935
+ PL RIF + + S T+ SN G M+ R C+ C S+
Sbjct: 1725 LIPPLSRIFNLVGADVESWYESMPRTKRAGKYDRSN-GKMRIDSHFRSSHCVVCGGE-SS 1782
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV-LCTSRDCPIFYR 994
+C C+ + +S+ + C C + +V LC S DCP+ Y
Sbjct: 1783 TDICRSCRHTPSSTSHALLSREHLAQSALSDFHRICASCSSTPPGEVILCDSVDCPVLYA 1842
Query: 995 RKKAQKDMAE 1004
+ KA+++M +
Sbjct: 1843 KVKAEREMED 1852
>gi|115402505|ref|XP_001217329.1| hypothetical protein ATEG_08743 [Aspergillus terreus NIH2624]
gi|114189175|gb|EAU30875.1| hypothetical protein ATEG_08743 [Aspergillus terreus NIH2624]
Length = 1696
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 197/685 (28%), Positives = 329/685 (48%), Gaps = 50/685 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y + +L+ + H+S + Q+G
Sbjct: 981 TGRHMINIWRAMQNELN---LLQYTMENVVF-HLLHRRIPHYSFRDLTEWYQSGKPRNLL 1036
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
++ Y + + ++D I E AR+ GV + +RG KV S + R AK +
Sbjct: 1037 KVIDYFVSRVQMDLEIIDANELIPRTSEQARLLGVDFYSVFARGSQFKVESLMFRIAKPE 1096
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ KQ G + V+E ++ FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 1097 NFLLVSPSRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFL 1156
Query: 540 T-------------PEDARK---LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
+ AR+ L+L + +N P+G + K ++K +L ++L E+L
Sbjct: 1157 GRARQWRGRDKMGFTDYARQPGLLDLFKDKINVAPNGMIYAKPEVRKSLLAKMLSEILET 1216
Query: 584 RKRAKADLKEAKD-PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K +K KD + + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1217 RVMVKTGMKMDKDDKMLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQSG 1276
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E L+ +V + AEV+YGDTDS+ V T A +G E A ++G
Sbjct: 1277 RETLEKAIALIH----SVERW--GAEVVYGDTDSLFVYLKGRTRNEAFDIGEEIAKAVTG 1330
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLV 760
P+KL+FEKVY+P +L++KKRY G Y +K + D KGIETVRRD + +
Sbjct: 1331 INPHPVKLKFEKVYHPCVLLAKKRYVGFKYEHRDQKEPEFDAKGIETVRRDGTPAEQKIE 1390
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + D+ +Y ++ + +L + + + + T + + +
Sbjct: 1391 EKALKLLFRTADLSQVKRYFQAQCTKILQGNVSIQDFCFAREVRLGTYSERGLPPPGALI 1450
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
+ + D P G+RVPYV++ A G++ +R P +L + + +D YY+ +
Sbjct: 1451 STKKMLEDPRAEPQYGERVPYVVVTGAPGSRLIDRCVPPETLLHDAQLDLDAEYYITKNL 1510
Query: 879 SKPLLRIFEPILKNASK---ELLSGDHTRSISISTPSNSGIMKFAKRQL-------SCIG 928
PL RIF + N + E+ R + T S+S + ++ L +CI
Sbjct: 1511 IPPLERIFNLVGANVRQWYDEMPKVQRIRRVE-GTASSSATGRDMRKTLESYMKASACIV 1569
Query: 929 CKALISNGT--LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD-VLCT 985
C+ +++ +C+ C + V++ ++ E L C+ C G+ D V C
Sbjct: 1570 CRTKLTDTDVPVCAECMQQSHVSLLDLVNRQRQAEKRVIDLQRVCRSCMGAAFGDEVKCD 1629
Query: 986 SRDCPIFYRRKKAQKDMAEAKLQLD 1010
S+DCP+FY R + + LD
Sbjct: 1630 SKDCPVFYSRTRHMANWRHTNAVLD 1654
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 20/173 (11%)
Query: 110 LPLSSGSAA--------IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI----- 156
LP G+A +IRIFG T G VC VHG PY Y+ + P+D+
Sbjct: 25 LPYRDGAAGKYDRPKVPVIRIFGATETGQKVCVHVHGAFPYLYVQYDGSLQPEDVRSAIR 84
Query: 157 SHFHQILEGRMREANRNS--KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVA 214
S H I RN+ K +V HI +V K Y + F KI + P
Sbjct: 85 SLHHSIDHALAASYRRNAYDKRAVYVAHITLV-KGVPFYGYHVGYRFFFKIYLLSPLYTT 143
Query: 215 SCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+L +G L + YES++ + ++M D ++ G +++ K+R
Sbjct: 144 RLADLLIQGAVLK----RPLQPYESHLQYVPQWMCDYSLYGCAYMKCGKVKFR 192
>gi|400595538|gb|EJP63333.1| DNA polymerase family B [Beauveria bassiana ARSEF 2860]
Length = 1672
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 201/681 (29%), Positives = 322/681 (47%), Gaps = 62/681 (9%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y + +L+ + H+S + + ++G
Sbjct: 972 TGRHMINIWRAMRGELN---LLQYTMENVAW-HLLHRRVPHYSYKTLTAWYKSGKPHDLS 1027
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
+L Y + ++L+ I E AR+ GV + SRG KV S + R AK +
Sbjct: 1028 KLLRYLQSRTKIDLQILEANELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1087
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N L+ P+ KQ GS+ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1088 NFLLISPSKKQVGSQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFL 1147
Query: 540 T----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
A + L + +N P+G FVK+ ++K +L ++L E+L
Sbjct: 1148 GRIVNWCGTNKMGFAEYKRQAGLMALLKDHINIAPNGMMFVKAEIRKSLLAKMLTEILET 1207
Query: 584 RKRAKADLKEAKD-PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +KE KD + + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1208 RVMVKSGMKEDKDDKMLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTA 1267
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + + TV + AEV+YGDTDS+ + T + A +G E A IS
Sbjct: 1268 RETLERSIAYIH----TVEKW--GAEVVYGDTDSLFIYLKGRTKDQAFDIGNEIAQEISK 1321
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLV 760
+P+KL+FEKVY P +L +KKRY G +Y T + D KGIETVRRD + +
Sbjct: 1322 MNPRPMKLKFEKVYLPCVLQTKKRYVGYMYETKDQVHPVFDAKGIETVRRDGTPAEQKIE 1381
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + D+ Y ++ + ++ + + + + + D A +
Sbjct: 1382 EKALRLLFETADLSQIKAYFQAQCAKIMRGTVSVQDFCFAREVRLGSYSDKGPPPAGALI 1441
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
+ R DA P G+RVPYV+I A GA+ +R P +L N + +D YY+ +
Sbjct: 1442 STRKMLEDARAEPQYGERVPYVVISGAPGARLIDRCVAPEELLANPHWHLDAEYYISKNL 1501
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTP------SNSGIMKFAKRQLSCIGC--- 929
PL RIF + N + + I + P S ++ + C+ C
Sbjct: 1502 IPPLERIFSLVGANVRQWYDEMPKVQRIYQTAPPGAAGGSKRSTLESYMKSTHCLVCGVK 1561
Query: 930 -----------KALISNGTLCSHCKG---REAELYCKTVSQVQELEVLFGRLWTQCQECQ 975
A + TLC C+G R + L +T ++ E + L C+ C
Sbjct: 1562 FLREASAAAAAAAAVHTTTLCPRCRGPGARSSLLALQT--RLAAEETRYQELLAVCRGCM 1619
Query: 976 G-SLHQDVLCTSRDCPIFYRR 995
G + DV C S+DCP+F+ R
Sbjct: 1620 GVAPLDDVPCDSKDCPVFWTR 1640
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF---------HQI-LEGRMR 168
IIRIFG T G VC VHG PY ++ G+ D++ F H + + R
Sbjct: 42 IIRIFGSTETGQKVCAHVHGAFPYLFVEYEGGLSQDEVGSFIYRLHLSIDHALSVSFRRD 101
Query: 169 EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDG 228
E NS+ FV I +V K Y + FLKI + P ++ +L +G L
Sbjct: 102 EQGLNSR---FVARITLV-KGVPFYGYHVGYRFFLKIYMFNPMVMTRLADLLQQGAILK- 156
Query: 229 LGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ F YE+++ + +FMID N+ G ++++ +R
Sbjct: 157 ---QKFQPYEAHLQYLSQFMIDYNLFGCDYMDAAQAAFR 192
>gi|403420400|emb|CCM07100.1| predicted protein [Fibroporia radiculosa]
Length = 1164
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 187/604 (30%), Positives = 293/604 (48%), Gaps = 50/604 (8%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
+LD + E ARV GV +LSRG KV S + R AK ++ V+ P+ + G +
Sbjct: 534 VLDVAEVVTKNAEFARVFGVDFFSVLSRGSQFKVESFMFRIAKPESFVLLSPSKQDVGKQ 593
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT-------------- 540
++E + FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 594 NAAECMPLIMEPLSAFYNSPLVVLDFQSLYPSVMIAYNYCYSTCLGRVTDFKGQNKFGVT 653
Query: 541 --PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPL 598
+ A L E ++ P+G +V +++KG+L +L ELL R K +K AKD
Sbjct: 654 DLHQPAGLLETLQEHMHVAPNGMVYVNQDVRKGLLGRMLTELLDTRVMVKQAMKGAKD-- 711
Query: 599 EKA---VLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVED 654
+KA +LD RQL LK AN YG+T AT G++P +EI+ S+ GR+ +E +++
Sbjct: 712 DKALRRILDARQLGLKFIANVTYGYTSATFSGRMPAVEIADSIVQSGRETLEKAIRVINS 771
Query: 655 KFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKV 714
+ A+V+YGDTDS+ + T E A ++G++ A+ ++ P+KL+FEKV
Sbjct: 772 T------KKWGAKVVYGDTDSLFIYLRGKTKEQAFRIGQDMAETVTSMNPAPVKLKFEKV 825
Query: 715 YYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
Y P +L++KKRY G + +P+ + D KGIETVRRD + + CL + +D+
Sbjct: 826 YLPCVLMAKKRYVGFKFESPDDSEPTFDAKGIETVRRDGIPAQQKMTETCLKILFRTQDL 885
Query: 774 PGAVQYVKSTISDLLMNRMDLSLLVITKGL-TKTGDDYEVKAAHVELAERMRKRDAATAP 832
+Y + + +L NR+ + K + T D V +A R D P
Sbjct: 886 SKVKKYCYESWTRILENRVSPHDFIFAKEVKMGTYSDKVPPPPGVTVAARRTTNDPMDEP 945
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP-IDTHYYLENQISKPLLRIFEPI-- 889
G+RVPYVI++ + +R+ P +++N+ +D YY+ + PL RIF +
Sbjct: 946 QYGERVPYVIMRGDPDTRLVDRAVSPGELIDNSQKQLDAVYYISRVLIPPLERIFNLVGA 1005
Query: 890 -----LKNASKELLSGDHTRSISIST------PSNSGIMKFAKRQLS--CIGCKALISNG 936
+ K L + IS+S + + K + LS CI C+AL G
Sbjct: 1006 DVRSWYDDMPKALRADQPLDPISLSPRRVKKYTAATNAFKIEEHFLSSHCINCRALTLEG 1065
Query: 937 TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSL-HQDVLCTSRDCPIFYRR 995
LC C+ +S+++ E + C C G+ + V C S DCP + R
Sbjct: 1066 -LCDDCRADPITTISGLLSRLRVAEDRLRDVQLICSSCCGTAPGEPVRCESLDCPWLFER 1124
Query: 996 KKAQ 999
KK +
Sbjct: 1125 KKVE 1128
>gi|403331866|gb|EJY64905.1| DNA polymerase [Oxytricha trifallax]
Length = 263
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 172/239 (71%), Gaps = 9/239 (3%)
Query: 783 TISDLLMNRMDLSLLVITKGLTK------TGDD---YEVKAAHVELAERMRKRDAATAPN 833
ISDLL NR+DLSLLVIT+GL K + DD Y+ K AHVELAE+MRKRD A+AP+
Sbjct: 22 VISDLLQNRIDLSLLVITRGLGKKAKKINSSDDKEVYQAKQAHVELAEKMRKRDEASAPS 81
Query: 834 VGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNA 893
VGDR+ +V++K K AK YE+SEDP+YVL+NN+PID +YL++Q+ +PL+RIFEPIL+N
Sbjct: 82 VGDRIAFVMVKGTKDAKGYEKSEDPLYVLDNNLPIDYQHYLQHQLKQPLIRIFEPILQNP 141
Query: 894 SKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAELYCKT 953
+ LL+G+HTRSI + +N+G+ +F + SC+ CK+++ +G LC C ++Y +
Sbjct: 142 EQVLLTGEHTRSIHVPKVTNTGLGRFTIVKKSCLRCKSVVESGALCKDCMPEMKKIYIER 201
Query: 954 VSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRW 1012
+ E + LW QCQ CQGSLH D+LC SRDCPIFYRR KA K++ E++ +DR+
Sbjct: 202 KLEQITFEKNYNDLWIQCQRCQGSLHLDILCQSRDCPIFYRRVKAAKNLKESRDIIDRF 260
>gi|392858784|gb|AFM85234.1| DNA polymerase [Myotis ricketti herpesvirus 1]
Length = 998
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 176/520 (33%), Positives = 273/520 (52%), Gaps = 51/520 (9%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L E R +L +YC+KD+ L LL + E+A++ +P+
Sbjct: 456 KKEDVSYKDIPVLFRSGPEGRAKLGLYCVKDSILVMDLLKFFVTHIEISEIAKIAMIPVR 515
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V + LL +K++N ++P V + + G Y+GATV+ GFY P+ +D
Sbjct: 516 RVLTDGQQIRVFTCLLAASKKENYILP-VSSSTNTDG-YQGATVINPHPGFYNTPVLVVD 573
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP----ECVNKTPSGETFVKSNLQKGILPE 575
FASLYPSI+ A+NLCYSTL+ E K N E + + FVK + +L +
Sbjct: 574 FASLYPSIIQAHNLCYSTLIPNESLYKHNHLKSSDYETFHISSGPVHFVKKHKSVSLLSK 633
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
+L L RK K +L + DPL K +LD +QLA+K++ N+VYGFTG T G LPC++I+
Sbjct: 634 LLTTWLEKRKYIKNELIKCHDPLMKTILDKQQLAIKVTCNAVYGFTGVTSGLLPCVKIAE 693
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYE------HNA-----EVIYGDTDSVMVQF-GVP 683
+VT GR M+E +K +E+ T +E HN +VIYGDTDS+ + G P
Sbjct: 694 TVTLQGRIMLEKSKLFIEN-ITPQQLHELEPKNFHNEREAHLKVIYGDTDSLFIDCRGYP 752
Query: 684 TVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTK 743
+ AA F +PIKLE EK++ LL++KKRY G+ T DK+ K
Sbjct: 753 LSSVQVFCESLAAATTRALFEEPIKLEAEKIFQCLLLLAKKRYIGVLST-----DKLLMK 807
Query: 744 GIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS--------------------- 782
G++ +R+ C +++ + L +L D ++ A Q + S
Sbjct: 808 GVDLIRKTTCKFIQDKCKQTLDLLLRDEEVKKAAQLLTSKPSEYVYQHGLPNGFLKIMNI 867
Query: 783 ---TISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVGDRV 838
++ DL N + + L + L++ Y+ + H+ + ++ R+ P + DR+
Sbjct: 868 LNNSMEDLRSNIVPVKDLTFSTELSRPIHTYKTLTLPHLCVYNKILSRNEE-LPQIHDRI 926
Query: 839 PYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
PYV IK K+ + +EDP YV +NNIPI YL+ I
Sbjct: 927 PYVFIKCDASKKS-DMAEDPSYVEQNNIPIAVDLYLDKLI 965
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 144/292 (49%), Gaps = 35/292 (11%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
S ++++ G T G+SVC V YFY P G+ + I++ ++ A+
Sbjct: 118 SGTVLKLLGKTNCGYSVCVNVFRQNIYFYARVPPGVS------LNYIIQQAIK-ASFGKV 170
Query: 176 VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
QF E K+ + Y + + + KI ++ +M+ SC ++ L +
Sbjct: 171 SCQFFT--ERTFKKILREYDTTEHEVY-KITLSSSSML-SC--------IVEKLRDHNCD 218
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSD---IISRHP 292
+ESNV RF+ID N W R+T + S LEFDC Y D I RH
Sbjct: 219 IFESNVDATKRFVIDNNFSTFGWYSCTNAIIRQTNRD-SNTDLEFDCGYEDLSFIKDRH- 276
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLVTLQGEKQPFIRNVM-TL 349
+ P+ ILSFDIEC G KG FP THD VIQ++ ++ GE RN++ +L
Sbjct: 277 -----EWPPYTILSFDIECIGEKG-FPVATHDQDLVIQISCILWTVGENT--CRNILLSL 328
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+C PI ++ F +E D+ A+ IR+++ + + GYNI FD+PYLI++
Sbjct: 329 GTCDPIPDTEIYEFPSELDMFYAFFSMIRDINIEFITGYNIANFDIPYLIDR 380
>gi|157124378|ref|XP_001660448.1| DNA polymerase zeta catalytic subunit [Aedes aegypti]
gi|108874011|gb|EAT38236.1| AAEL009851-PA [Aedes aegypti]
Length = 2080
Score = 263 bits (671), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 191/615 (31%), Positives = 298/615 (48%), Gaps = 50/615 (8%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
LL +L I E+A++ G+ +LSRG +V S +LR AK +N V P+++Q
Sbjct: 1469 LLHQLDLIGRTAELAKLFGIQFYEVLSRGSQFRVESMMLRIAKPRNFVSVSPSIQQRAHM 1528
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPED----------- 543
+ +LE + FY P+ LDF SLYPS+++AYN C+ST + +
Sbjct: 1529 RAPEYLPLILEPESRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGQSEPFEFG 1588
Query: 544 ARKLNLPP---------ECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEA 594
A L L P + +P G FVKS++++GILP +L E+L R K +K
Sbjct: 1589 ASHLRLSPRMLKVLVEKNLITISPCGIAFVKSSVREGILPRMLNEILTTRLMVKGSMKLH 1648
Query: 595 K-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLV 652
K + + + VL RQL LK+ AN YG+T A G++PC+E+ SV S GR+ +E K+V
Sbjct: 1649 KENSILQRVLHSRQLGLKLIANVTYGYTAANFSGRMPCVEVGDSVVSKGRETLERAIKMV 1708
Query: 653 EDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFE 712
E A+V+YGDTDS+ V T E A K+G E AD ++ P+KL+ E
Sbjct: 1709 E------TSERWGAKVVYGDTDSLFVLCPGRTKEQAFKIGAEIADAVTKDNPPPVKLKLE 1762
Query: 713 KVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTECLHKILVDR 771
KVY P +L +KKRY G + P++ + + KGIETVRRD C +V ++ + L + R
Sbjct: 1763 KVYQPSILQTKKRYVGYMYETPDQEKPVYEAKGIETVRRDGCPVVSKMLEKVLRILFETR 1822
Query: 772 DIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAA 829
D+ +Y S +L R++L + K + D Y+ A +EL R + D
Sbjct: 1823 DVSKVKEYTCRQFSKILEGRVNLQDFIYAKEF-RGEDGYKPGACVPALELTRRWKVVDPR 1881
Query: 830 TAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL-ENNIPIDTHYYLENQISKPLLRIFEP 888
P G RVPYVII P +L +N + I+++YY+ I PL R
Sbjct: 1882 REPRRGQRVPYVIINGPPLVPLIRLVRSPDELLADNGLKINSNYYIGKAIIPPLNRCLLL 1941
Query: 889 ILKNASK---------ELLSGDHTRSISIST----PSNSGIMKFAKRQLSCIGCKALISN 935
I + ++ +LL + S+++ P S I ++ SCIG S+
Sbjct: 1942 IGADVNQWYNDMPRKYQLLHNTGGKRSSLASELQLPKKSTISQYFS-TTSCIGDCGNQSH 2000
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRR 995
+C+ C+ R + ++ LE C+ C + + C S DCP+ +
Sbjct: 2001 SGVCTECRKRPQRTVTYVMDKINRLERRVELCEKMCRSC-CQRNFETACISLDCPVLFVL 2059
Query: 996 KKAQKDMAEAKLQLD 1010
+ ++ A+ + D
Sbjct: 2060 NQRTREYAQVQYYRD 2074
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS---HFHQILEG-----RMREA 170
+IR+FG T +G C +HG PY Y+ G D + +QI +
Sbjct: 45 VIRLFGSTADGTHSCVHIHGVFPYLYVPF-DGNTADRTAVDRLMYQIASSLDKAINVSLG 103
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
N NS R I +V+ I Y +++ Q F KI + P ++ +L G+ L
Sbjct: 104 NANSAATHVFR-IALVKGIPIYGYHRKEHQ-FFKIYMYNPYLIRKANNLLMNGVILS--- 158
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT--------LSYCQLEFDC 282
+ F T+ES+V + L+F ID N+ G + ++V R +T +S + E D
Sbjct: 159 -RVFQTFESHVPYILQFFIDYNLYGMSLLDVLESAIRPRTETGEEGHLQKMSTSEYEIDI 217
Query: 283 LYSDIISRH 291
L DI++RH
Sbjct: 218 LAGDILNRH 226
>gi|363990259|gb|AEW46233.1| DNA polymerase catalytic subunit [Cebine herpesvirus 1]
Length = 1024
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 171/543 (31%), Positives = 280/543 (51%), Gaps = 66/543 (12%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I N R + YC++DA L + L + + F + +AR+ + +
Sbjct: 460 QKDDLSYKEIPVKFLANEAGRAVVGKYCVQDAALVKDLFNVINFHYEAGAVARLAKIAMR 519
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAG-SEQGTYEGATVLEARAGFYEKPIATL 518
++S GQ I++ + LL + +++V+P + + E+ +Y+GATV E G+Y P+
Sbjct: 520 RVVSDGQQIRIYTSLLDECSCRDMVLPTYRNSEPGEEVSYQGATVFEPEIGYYNDPVLVF 579
Query: 519 DFASLYPSIMMAYNLCYSTLVT-----PEDARKLNLPPECVNKTPSGET--FVKSNLQKG 571
DFASLYPSI+MA+NLCYSTL+ P++ + + E +G T FV+ ++
Sbjct: 580 DFASLYPSIIMAHNLCYSTLIMDNGECPDEEKVYEVRFE------NGTTYRFVRPEVRSS 633
Query: 572 ILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCI 631
+L E+L +A RK +A +K+ DPL+K +LD QLALK++ NS YGFTG G LPC+
Sbjct: 634 VLSELLTRWVAQRKAVRAAMKDCTDPLKKTLLDKEQLALKVTCNSFYGFTGVANGMLPCL 693
Query: 632 EISSSVTSYGRQMIEHTKKLVEDKFTTV--------------GGYEHNAEVIYGDTDSVM 677
+++S+T GR M++ T + + D F+ GG E A+VIYGDTDSV
Sbjct: 694 PVAASITRIGRSMLQETARFIHDNFSAPDFLKTFFNAEDYVEGGVE--AKVIYGDTDSVF 751
Query: 678 VQF-GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEK 736
V + G+ R A S F P+KLEFEKV+ ++I KKRY G E
Sbjct: 752 VCYRGMKPSALKASADRVARHVTSCLFTHPVKLEFEKVFISLMMICKKRYIG----KIEG 807
Query: 737 FDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLL-------- 788
+ KG++ VR+ +C VKN++ + L + D ++ A ++ ++L
Sbjct: 808 SVGLSMKGVDLVRKTSCEFVKNVIKDVLALLFDDAEVSSAAVSLRQCSMEVLKKQGPPTG 867
Query: 789 ----------------MNRMDLSLLVITKGLTKTGDDY-EVKAAHVELAERMRKRDAATA 831
R+ + LV++ L+K Y + H+ + +R+ R +
Sbjct: 868 FFKILERLTRARDELHTGRVCVDELVLSSVLSKDISLYKQPNLPHLSVIKRLAAR-SEEL 926
Query: 832 PNVGDRVPYVIIKAA----KGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
P+VGDRV YV+ A + YE +EDP++V E+ +PI Y + Q+ K + +
Sbjct: 927 PSVGDRVFYVLTAAPVDVRRKMNNYELAEDPLFVKEHQVPIHADKYFD-QVVKAITNVLS 985
Query: 888 PIL 890
P+
Sbjct: 986 PVF 988
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 138/315 (43%), Gaps = 38/315 (12%)
Query: 107 RELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGR 166
R ++P S +IR FGV G S+C V G YFY P+ ++ H
Sbjct: 108 RHIIP----SGNVIRFFGVMENGRSICANVFGQHSYFYCEHPETDRLREVIH-------S 156
Query: 167 MREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG--ILDRGI 224
+ E K P + + V+K SI Y P L V ++A G +L+ G
Sbjct: 157 VSELVPEPKTPCAITVLP-VKKMSIYGYGTS-CVPHLHRVSISNWIMARKIGQYLLEHG- 213
Query: 225 QLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLY 284
F YE+ V R ++D + W V + R + +S C E DC
Sbjct: 214 ---------FKVYETRVDPLTRLVVDKKLTTFGWCFVDRYEVRARGR-VSTCDFEIDCEI 263
Query: 285 SDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLVTLQGEKQPF 342
SD+ E + +R LSFDIEC G FP P + D VIQ++ + G +
Sbjct: 264 SDLFC---SSEDTSWPLYRCLSFDIECLSASGGFPTPENVDDIVIQISCVCYGTGREDAG 320
Query: 343 I------RNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLP 396
+ +++ T+ SC PI VDV F +E ++LL + F + ++ GYNI FD
Sbjct: 321 VKFGKSGKHLFTIGSCGPIEDVDVYEFPSEYELLLGFFLFFQRYGACMVTGYNINAFDFK 380
Query: 397 YLIEK-EDVHHSIIS 410
YL+ + E+V+ +S
Sbjct: 381 YLLTRLENVYKVGVS 395
>gi|83773395|dbj|BAE63522.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391863054|gb|EIT72368.1| DNA polymerase zeta, catalytic subunit [Aspergillus oryzae 3.042]
Length = 1566
Score = 262 bits (670), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 301/634 (47%), Gaps = 44/634 (6%)
Query: 413 QNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLS 472
Q+G ++ Y + + +L+ + E AR+ G+ + SRG KV S
Sbjct: 925 QSGKPRDLMKVVDYFVSRVQMNLEILESNELVPRISEQARLLGIDFYSVFSRGSQFKVES 984
Query: 473 QLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMA 530
+ R AK +N LV P+ KQ G + V+E ++ FY P+ LDF SLYPSIM+A
Sbjct: 985 LMFRIAKPENFLLVSPSKKQVGQQNALECLPLVMEPQSDFYTSPLIVLDFQSLYPSIMIA 1044
Query: 531 YNLCYSTLVT----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILP 574
YN CYST + R L L + +N P+G + K +++ +L
Sbjct: 1045 YNYCYSTFLGRVHQWRGRDKMGFTEYQRQPRLLELFKDKINIAPNGMMYAKPEVRRSLLA 1104
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAV---LDGRQLALKISANSVYGFTGATV-GQLPC 630
+L E+L R K +K KD +KA+ L+ RQLALK+ AN YG+T A+ G++PC
Sbjct: 1105 RMLAEILETRVMVKTGMKMDKD--DKALQRLLNNRQLALKLIANVTYGYTSASFSGRMPC 1162
Query: 631 IEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMK 690
EI+ S+ GR+ +E L+ +V + AEV+YGDTDS+ V T + A
Sbjct: 1163 SEIADSIVQSGRETLEKAIALIH----SVERW--GAEVVYGDTDSLFVYLKGRTRDEAFD 1216
Query: 691 LGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVR 749
+G E A ++ T P+KL+FEKVY+P +L++KKRY G Y +K + D KGIETVR
Sbjct: 1217 IGEEIAKAVTETNPSPVKLKFEKVYHPCVLLAKKRYVGFKYEHRDQKEPEFDAKGIETVR 1276
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGD 808
RD + + + L + D+ +Y + + +L R+ + + + T
Sbjct: 1277 RDGTPAEQKIEEKALKLLFRTADLSQVKRYFQKQCTKILQGRVSIQDFCFAREVKLGTYS 1336
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIP 867
+ + ++ + D P G+RVPYV++ A G++ +R P +L + +
Sbjct: 1337 ERGLPPPGALISTKKMLEDPRLEPQYGERVPYVVVTGAPGSRLIDRCVPPETLLHDAQLE 1396
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDHTRSI-----SISTPSNSGIMKF 919
+D YY+ I PL RIF + N + E+ R + S + ++
Sbjct: 1397 LDAEYYITKNIIPPLERIFNLVGANVRQWYDEMPKVQRIRRVEGTVTSTGKDARKTTLES 1456
Query: 920 AKRQLSCIGCKALISNGT--LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG- 976
+ +CI CKA + + +C+ C + V++ + E L C+ C G
Sbjct: 1457 YMKSSTCIVCKAKLDDTDVPVCAECIRQPHISLLDLVTRQRHAEKSVSDLLRVCRSCMGV 1516
Query: 977 SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
+V C S+DCP+FY R + + K LD
Sbjct: 1517 PFGDEVKCDSKDCPVFYSRTRYVANWRHTKAVLD 1550
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------N 171
+IRIFG T G VC VHG PY Y+ + P+++ + L + A N
Sbjct: 42 VIRIFGATETGQRVCVHVHGAFPYLYVPYDGDLSPEEVRRAIRDLHISIDHALALSYRRN 101
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
K FV HI +V K Y + F K+ + P +L +G L
Sbjct: 102 AYDKKAAFVAHITLV-KGVPFYGYHVGYRFFFKVYLLSPIYTTRVADLLLQGAIL----K 156
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+S YES++ + ++M D ++ G +++ K+R
Sbjct: 157 RSLQPYESHLQYIPQWMCDYSLYGCAYMKCSKVKFR 192
>gi|134079611|emb|CAK40828.1| unnamed protein product [Aspergillus niger]
Length = 1668
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 193/647 (29%), Positives = 309/647 (47%), Gaps = 48/647 (7%)
Query: 404 VHHSIISDL----QNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
V H DL ++G ++ Y + + +L+ I E AR+ G+
Sbjct: 1014 VPHYSFQDLTEWYRSGKPRNILKVVEYFVSRVQMDLEILESNELIPRTSEQARLLGIDFF 1073
Query: 460 FLLSRGQSIKVLSQLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIAT 517
+ SRG KV S + R AK +N LV P+ KQ G + V+E ++ FY P+
Sbjct: 1074 SVFSRGSQFKVESLMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSDFYTSPLVV 1133
Query: 518 LDFASLYPSIMMAYNLCYSTLVT----------------PEDARKLNLPPECVNKTPSGE 561
LDF SLYPSIM+AYN CYST + R L L + +N P+G
Sbjct: 1134 LDFQSLYPSIMIAYNYCYSTFLGRAHQWRGRNKMGFTDYKRQPRMLELLQDKINIAPNGM 1193
Query: 562 TFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAV---LDGRQLALKISANSVY 618
+ K ++K +L +L E+L R K +K KD +KA+ L+ RQLALK+ AN Y
Sbjct: 1194 MYAKPEVRKSLLARMLAEILETRVMVKNGMKIDKD--DKALQRLLNNRQLALKLIANVTY 1251
Query: 619 GFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVM 677
G+T A+ G++PC EI+ S+ GR+ +E + +V + AEV+YGDTDS+
Sbjct: 1252 GYTSASFSGRMPCSEIADSIVQSGRETLEKAIAFIH----SVERW--GAEVVYGDTDSLF 1305
Query: 678 VQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEK 736
V T + A +G E A ++ P+KL+FEKVY+P +L++KKRY G Y +K
Sbjct: 1306 VYLKGRTRDEAFTIGEEIAKAVTSINPHPVKLKFEKVYHPCVLLAKKRYVGFKYEHRDQK 1365
Query: 737 FDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSL 796
+ D KGIETVRRD + + + L + D+ +Y +S + ++ R+ +
Sbjct: 1366 EPEFDAKGIETVRRDGTPAEQKIEEKALKLLFRTADLSQVKRYFQSQCTKIMQGRVSIQD 1425
Query: 797 LVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERS 855
K + T D + ++ + D + P G+RVPYV++ A G++ +R
Sbjct: 1426 FCFAKEVRLGTYSDRGLPPPGALISTKKMIADPRSEPQYGERVPYVVVTGAPGSRLIDRC 1485
Query: 856 EDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDHTRSIS---I 908
P +L + ++ +D YY+ + PL RIF + N + E+ R + +
Sbjct: 1486 VPPETLLHDPHLDLDADYYITKNLIPPLERIFNLVGANVRQWYDEMPKVQRVRRVEGALL 1545
Query: 909 STPSNSG--IMKFAKRQLSCIGCKALI--SNGTLCSHCKGREAELYCKTVSQVQELEVLF 964
+ G ++ + +CI C++ + ++ LC C + + VS+ + E
Sbjct: 1546 RGAAGGGRKTLESYMKASTCIVCRSKLRDTDTPLCGTCLRQPHLALFELVSRQRAAEKRV 1605
Query: 965 GRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
L C+ C G + DV C S+DCP+FY R + + K LD
Sbjct: 1606 VDLQRVCRSCMGVTFGDDVRCDSKDCPVFYSRTRDEASWRHTKAVLD 1652
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 21/177 (11%)
Query: 99 DYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D G ++R +P +IRIFG T G VC VHG PY Y+ + + ++
Sbjct: 29 DGAAGKNDRSKVP-------VIRIFGATETGQKVCVHVHGAFPYLYVEYDGDLETEKVNS 81
Query: 159 FHQILEGRMREA-------NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALP 210
+ L + A N N+K FV HI +V + + +Y F KI + P
Sbjct: 82 ALRSLRLSIDHALAVSYNRNENAKKIPFVAHITLV--KGVPFYGYHVGYKFYFKIYLMSP 139
Query: 211 TMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ +L +G L + YES++ F ++M D ++ G +++ K+R
Sbjct: 140 IYMTRLADLLLQGAIL----KRPLQPYESHLQFIPQWMCDYSLYGCAYLKCSKVKFR 192
>gi|317032425|ref|XP_001394913.2| DNA polymerase zeta catalytic subunit [Aspergillus niger CBS 513.88]
gi|350631625|gb|EHA19996.1| hypothetical protein ASPNIDRAFT_179788 [Aspergillus niger ATCC 1015]
Length = 1668
Score = 262 bits (669), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 193/647 (29%), Positives = 309/647 (47%), Gaps = 48/647 (7%)
Query: 404 VHHSIISDL----QNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
V H DL ++G ++ Y + + +L+ I E AR+ G+
Sbjct: 1014 VPHYSFQDLTEWYRSGKPRNILKVVEYFVSRVQMDLEILESNELIPRTSEQARLLGIDFF 1073
Query: 460 FLLSRGQSIKVLSQLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIAT 517
+ SRG KV S + R AK +N LV P+ KQ G + V+E ++ FY P+
Sbjct: 1074 SVFSRGSQFKVESLMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSDFYTSPLVV 1133
Query: 518 LDFASLYPSIMMAYNLCYSTLVT----------------PEDARKLNLPPECVNKTPSGE 561
LDF SLYPSIM+AYN CYST + R L L + +N P+G
Sbjct: 1134 LDFQSLYPSIMIAYNYCYSTFLGRAHQWRGRNKMGFTDYKRQPRMLELLQDKINIAPNGM 1193
Query: 562 TFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAV---LDGRQLALKISANSVY 618
+ K ++K +L +L E+L R K +K KD +KA+ L+ RQLALK+ AN Y
Sbjct: 1194 MYAKPEVRKSLLARMLAEILETRVMVKNGMKIDKD--DKALQRLLNNRQLALKLIANVTY 1251
Query: 619 GFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVM 677
G+T A+ G++PC EI+ S+ GR+ +E + +V + AEV+YGDTDS+
Sbjct: 1252 GYTSASFSGRMPCSEIADSIVQSGRETLEKAIAFIH----SVERW--GAEVVYGDTDSLF 1305
Query: 678 VQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEK 736
V T + A +G E A ++ P+KL+FEKVY+P +L++KKRY G Y +K
Sbjct: 1306 VYLKGRTRDEAFTIGEEIAKAVTSINPHPVKLKFEKVYHPCVLLAKKRYVGFKYEHRDQK 1365
Query: 737 FDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSL 796
+ D KGIETVRRD + + + L + D+ +Y +S + ++ R+ +
Sbjct: 1366 EPEFDAKGIETVRRDGTPAEQKIEEKALKLLFRTADLSQVKRYFQSQCTKIMQGRVSIQD 1425
Query: 797 LVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERS 855
K + T D + ++ + D + P G+RVPYV++ A G++ +R
Sbjct: 1426 FCFAKEVRLGTYSDRGLPPPGALISTKKMIADPRSEPQYGERVPYVVVTGAPGSRLIDRC 1485
Query: 856 EDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDHTRSIS---I 908
P +L + ++ +D YY+ + PL RIF + N + E+ R + +
Sbjct: 1486 VPPETLLHDPHLDLDADYYITKNLIPPLERIFNLVGANVRQWYDEMPKVQRVRRVEGALL 1545
Query: 909 STPSNSG--IMKFAKRQLSCIGCKALI--SNGTLCSHCKGREAELYCKTVSQVQELEVLF 964
+ G ++ + +CI C++ + ++ LC C + + VS+ + E
Sbjct: 1546 RGAAGGGRKTLESYMKASTCIVCRSKLRDTDTPLCGTCLRQPHLALFELVSRQRAAEKRV 1605
Query: 965 GRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
L C+ C G + DV C S+DCP+FY R + + K LD
Sbjct: 1606 VDLQRVCRSCMGVTFGDDVRCDSKDCPVFYSRTRDEASWRHTKAVLD 1652
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 21/177 (11%)
Query: 99 DYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D G ++R +P +IRIFG T G VC VHG PY Y+ + + ++
Sbjct: 29 DGAAGKNDRSKVP-------VIRIFGATETGQKVCVHVHGAFPYLYVEYDGDLETEKVNS 81
Query: 159 FHQILEGRMREA-------NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALP 210
+ L + A N N+K FV HI +V + + +Y F KI + P
Sbjct: 82 ALRSLRLSIDHALAVSYNRNENAKKIPFVAHITLV--KGVPFYGYHVGYKFYFKIYLMSP 139
Query: 211 TMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ +L +G L + YES++ F ++M D ++ G +++ K+R
Sbjct: 140 IYMTRLADLLLQGAIL----KRPLQPYESHLQFIPQWMCDYSLYGCAYLKCSKVKFR 192
>gi|365991463|ref|XP_003672560.1| hypothetical protein NDAI_0K01260 [Naumovozyma dairenensis CBS 421]
gi|343771336|emb|CCD27317.1| hypothetical protein NDAI_0K01260 [Naumovozyma dairenensis CBS 421]
Length = 1499
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 210/702 (29%), Positives = 336/702 (47%), Gaps = 71/702 (10%)
Query: 365 TERDVLLAWRDFIREVDPDVM----IGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETR 420
T R V+ WR E++ I YN+ + LP+ + ++D+ N N
Sbjct: 815 TGRHVINIWRALRSEMNLTQYTIENITYNVLRERLPHF------SYQSLTDMWNDNCSIS 868
Query: 421 RRLAV--YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKA 478
V Y L L +LL K FI +E AR+ G+ + + RG KV S L+R
Sbjct: 869 NLKTVINYWLLRTRLNIKLLQKQEFIPKTIEQARLIGIDFNSVSYRGSQYKVESFLIRIC 928
Query: 479 KQKN--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYS 536
K ++ L+ P KQ ++ V+E + FY+ P+ LDF SLYPSI+ AYN CYS
Sbjct: 929 KSESFLLLAPGKKQVRKQKALECVPLVMEPESSFYKSPLVVLDFQSLYPSIITAYNYCYS 988
Query: 537 TL---------------VTPEDARK--LNLPPECVNKTPSGETFVKSNLQKGILPEILEE 579
T+ VT + K L L V P+G ++K +++K L ++L E
Sbjct: 989 TMLGRVRELKTFGNEIGVTNINIEKNLLRLLENDVTIAPNGMVYLKPSVRKSTLAKMLTE 1048
Query: 580 LLAAR---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISS 635
+L R K+ +DL + + ++K +L+ +QLALK+ AN YG+T A+ G++PC +++
Sbjct: 1049 ILDIRVMVKKTMSDLSQDNNKMKK-LLNNKQLALKLLANVTYGYTSASFSGRMPCSDLAD 1107
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
SV GR+ +E KL+E + +A+V+YGDTDS+ V T + A +G E
Sbjct: 1108 SVVQTGRETLEKAIKLIE------ANEKWSAKVVYGDTDSLFVYLPGRTKDEAFLIGGEM 1161
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCL 754
A ++ P+ L+FEKVY+P +LISKKRY G + + + + D KGIETVRRD
Sbjct: 1162 AKAVTDANPAPVFLKFEKVYHPSILISKKRYVGYSYESSNQVNPSFDAKGIETVRRDGH- 1220
Query: 755 LVKNLVTECLHKILVD-RDIPGAVQYVKSTISDLLMNRMDLSLLVITK--GLTKTGDDYE 811
+ +TE KIL D +D+ YV+ + + R+ + K L D
Sbjct: 1221 PAQQKITEKALKILFDTKDLSHVKNYVQDQFTKIQEGRVSIQDFCFAKEVKLGTYKSDKT 1280
Query: 812 VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDT 870
A + +A +M +RD +RVPY++IK G ERS P L+ ++ +D+
Sbjct: 1281 APAGAI-VATKMMERDPRARAQYRERVPYLVIKGKSGQILRERSISPWEFLQRPDLELDS 1339
Query: 871 HYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK 930
YY+ + PL R+F I + + + + ++ + NS ++ + C+ C
Sbjct: 1340 EYYITKTLVPPLSRLFNLIGIDVFE--WATELSKYKKGHSTVNSNELEKLGASILCVNCG 1397
Query: 931 ALISNG---TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV----- 982
A ++ G +LC +C+ + + + E + +L C+ C +QD
Sbjct: 1398 AELTRGGNDSLCDNCQQNKLNTASTLLCNILERQDDLKKLELICRTCSYRYNQDAGMIGH 1457
Query: 983 ----LCTSRDCPIFYRRKKAQKDMA--------EAKLQLDRW 1012
C S DCPI++ R KA+K + EA LD W
Sbjct: 1458 DIANRCESYDCPIYFSRIKARKYLQGNITRRKEEALENLDTW 1499
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 18/181 (9%)
Query: 101 VIGDSNRELLPLSS-GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI--- 156
V+ S+ LPL +IRI+G GH V C VHG PY ++ + +
Sbjct: 33 VLDKSHGISLPLHQFNQVPVIRIYGNLPTGHQVLCHVHGVTPYIFVEYDGKLTDSSVVLN 92
Query: 157 -------SHFHQILEGRMREANRNSK--VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVV 207
+ QI+ M+ N+ + ++ ++ +V K Y Q F KI +
Sbjct: 93 QKCTQLHTQLEQIVFDSMKNNNKKTTGMSLDYISNVSVV-KAVPFYGFHVGWQLFYKISI 151
Query: 208 ALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
P+ V I+ G L +K +E+++ + L+F D N+ G +WI++ +R
Sbjct: 152 LNPSFVNRIADIIRDG----KLLIKKDEVFEAHIPYLLQFSADYNLFGCDWIKLKKCHFR 207
Query: 268 K 268
K
Sbjct: 208 K 208
>gi|317151429|ref|XP_001824655.2| DNA polymerase zeta catalytic subunit [Aspergillus oryzae RIB40]
Length = 1670
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 301/634 (47%), Gaps = 44/634 (6%)
Query: 413 QNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLS 472
Q+G ++ Y + + +L+ + E AR+ G+ + SRG KV S
Sbjct: 1029 QSGKPRDLMKVVDYFVSRVQMNLEILESNELVPRISEQARLLGIDFYSVFSRGSQFKVES 1088
Query: 473 QLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMA 530
+ R AK +N LV P+ KQ G + V+E ++ FY P+ LDF SLYPSIM+A
Sbjct: 1089 LMFRIAKPENFLLVSPSKKQVGQQNALECLPLVMEPQSDFYTSPLIVLDFQSLYPSIMIA 1148
Query: 531 YNLCYSTLVT----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILP 574
YN CYST + R L L + +N P+G + K +++ +L
Sbjct: 1149 YNYCYSTFLGRVHQWRGRDKMGFTEYQRQPRLLELFKDKINIAPNGMMYAKPEVRRSLLA 1208
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAV---LDGRQLALKISANSVYGFTGATV-GQLPC 630
+L E+L R K +K KD +KA+ L+ RQLALK+ AN YG+T A+ G++PC
Sbjct: 1209 RMLAEILETRVMVKTGMKMDKD--DKALQRLLNNRQLALKLIANVTYGYTSASFSGRMPC 1266
Query: 631 IEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMK 690
EI+ S+ GR+ +E L+ +V + AEV+YGDTDS+ V T + A
Sbjct: 1267 SEIADSIVQSGRETLEKAIALIH----SVERW--GAEVVYGDTDSLFVYLKGRTRDEAFD 1320
Query: 691 LGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVR 749
+G E A ++ T P+KL+FEKVY+P +L++KKRY G Y +K + D KGIETVR
Sbjct: 1321 IGEEIAKAVTETNPSPVKLKFEKVYHPCVLLAKKRYVGFKYEHRDQKEPEFDAKGIETVR 1380
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGD 808
RD + + + L + D+ +Y + + +L R+ + + + T
Sbjct: 1381 RDGTPAEQKIEEKALKLLFRTADLSQVKRYFQKQCTKILQGRVSIQDFCFAREVKLGTYS 1440
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIP 867
+ + ++ + D P G+RVPYV++ A G++ +R P +L + +
Sbjct: 1441 ERGLPPPGALISTKKMLEDPRLEPQYGERVPYVVVTGAPGSRLIDRCVPPETLLHDAQLE 1500
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDHTRSI-----SISTPSNSGIMKF 919
+D YY+ I PL RIF + N + E+ R + S + ++
Sbjct: 1501 LDAEYYITKNIIPPLERIFNLVGANVRQWYDEMPKVQRIRRVEGTVTSTGKDARKTTLES 1560
Query: 920 AKRQLSCIGCKALISNGT--LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG- 976
+ +CI CKA + + +C+ C + V++ + E L C+ C G
Sbjct: 1561 YMKSSTCIVCKAKLDDTDVPVCAECIRQPHISLLDLVTRQRHAEKSVSDLLRVCRSCMGV 1620
Query: 977 SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
+V C S+DCP+FY R + + K LD
Sbjct: 1621 PFGDEVKCDSKDCPVFYSRTRYVANWRHTKAVLD 1654
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------N 171
+IRIFG T G VC VHG PY Y+ + P+++ + L + A N
Sbjct: 42 VIRIFGATETGQRVCVHVHGAFPYLYVPYDGDLSPEEVRRAIRDLHISIDHALALSYRRN 101
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
K FV HI +V K Y + F K+ + P +L +G L
Sbjct: 102 AYDKKAAFVAHITLV-KGVPFYGYHVGYRFFFKVYLLSPIYTTRVADLLLQGAIL----K 156
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+S YES++ + ++M D ++ G +++ K+R
Sbjct: 157 RSLQPYESHLQYIPQWMCDYSLYGCAYMKCSKVKFR 192
>gi|343428638|emb|CBQ72168.1| probable catalytic subunit of DNA polymerase zeta UPR-1 [Sporisorium
reilianum SRZ2]
Length = 1677
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 205/707 (28%), Positives = 326/707 (46%), Gaps = 72/707 (10%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLA 424
T R L WR E+ ++ N+C L I K H ++ +G AE +
Sbjct: 944 TGRHTLNLWRLMKGELTLNLYTFENVCYHLLHRRIPKFS-HQTLTHWFTSGRAELVGKAL 1002
Query: 425 VYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV 484
+Y + L ++ + F+ E AR+ G+ ++SRG KV S +LR AK +N V
Sbjct: 1003 LYYVDMVELELEIISESEFVLRTAEFARIYGIDFFSVISRGSQFKVESIMLRIAKPENFV 1062
Query: 485 I--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE 542
+ P+ Q G + ++E ++ FY+ + LDF SLYPSIM+AYNLCYST +
Sbjct: 1063 LISPSRAQVGKQNAAECLPLIMEPQSAFYKGLLVVLDFQSLYPSIMIAYNLCYSTCLGRV 1122
Query: 543 DARK----------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKR 586
K L+L + VN + +G FVK +++K +L ++L E+L R
Sbjct: 1123 AGFKGTSKFGVTEYAPPKGLLSLLSDHVNISSNGLLFVKPDVRKSLLAKMLSEILDTRVM 1182
Query: 587 AKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQM 644
K +K K D + + + RQL+LK+ AN YG+T A+ G++PC+EI+ ++ GR+
Sbjct: 1183 VKGSMKGTKADKSFQRIQNARQLSLKLLANVTYGYTSASFSGRMPCVEIADAIVQTGRET 1242
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
+E L+ G E A+V+YGDTDS+ V T E A +LG AD ++
Sbjct: 1243 LEKAMDLIN------GTAEWGAQVVYGDTDSLFVYLPGRTKEEAFRLGNVIADKVTSLNP 1296
Query: 705 KPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTEC 763
+P+KL+FEKVY P +L++KKRY G Y T E+ D KGIETVRRD ++ ++ C
Sbjct: 1297 RPVKLKFEKVYLPSVLLAKKRYVGFKYETLDEREPGFDAKGIETVRRDFHPAIQRMLEAC 1356
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAER 822
+ + RD+ Y++ +L R+ + K + + D ++ R
Sbjct: 1357 IRILFRSRDLSIVKSYLQRQWRKILEGRVSPQDFIFAKEVRLGSYSDKVAPPPGAAVSSR 1416
Query: 823 MRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKP 881
D + P G+RVPY+I + AK +++ P L+N + I+ YY+ I P
Sbjct: 1417 RMLADPRSEPQYGERVPYIISQGEPRAKLNQQAVSPEAFLKNPQLQINALYYITRTIIPP 1476
Query: 882 LLRIFE-------------PILKNA------SKELLSG------DHTRSISI------ST 910
L R+F P NA + LLS D ++S S+
Sbjct: 1477 LARVFNLLGADVEAWFHEMPKPNNAYWNKRPTAALLSAVVAQQEDSEATLSAGSELPPSS 1536
Query: 911 P------SNSGIMKFAKRQL---SCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELE 961
P +NS + +C+ C + + +C C+ + S++ +LE
Sbjct: 1537 PKTTAKGANSAAISTLNSHYATETCLLCSSR-TEALVCLDCRQSPGDSIYAIASKLHKLE 1595
Query: 962 VLFGRLWTQCQECQGSLHQD-VLCTSRDCPIFYRRKKAQKDMAEAKL 1007
+ C C G V C S DCP Y++ K K + + L
Sbjct: 1596 TQASAIDRICSTCAGMERAGPVECVSLDCPYTYQKTKVHKSLQDTAL 1642
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-----NRN 173
I+RIFG T G VC VH PY YI + PDD+ + L + A RN
Sbjct: 65 ILRIFGATPAGQRVCLHVHNVYPYCYIQYKGSLDPDDVLRYIHRLGRELNAAMAASLRRN 124
Query: 174 SKVP---QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
P QF+ I + + + Y S FLKI P+ IL+ G G+
Sbjct: 125 PDDPESNQFIAAIHLCKGVNFYGYHVGYSY-FLKISFVDPSHNYRIAAILESG----GVM 179
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F +E ++ + L+FM+D NI G +++++ ++R
Sbjct: 180 KTVFQPFEIHIRYQLQFMLDYNIFGCDYLDLGDVRFR 216
>gi|426201443|gb|EKV51366.1| hypothetical protein AGABI2DRAFT_182321 [Agaricus bisporus var.
bisporus H97]
Length = 1480
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 198/632 (31%), Positives = 292/632 (46%), Gaps = 67/632 (10%)
Query: 432 YLPQR------LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
YL QR +L+ + E AR+ GV ++SRG KV S + R AK +N V+
Sbjct: 827 YLIQRNCATLQILEATELVTKTAEFARIFGVDFHSVISRGSQFKVESFMFRIAKSENFVL 886
Query: 486 --PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---VT 540
P+ G + ++E + FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 887 LSPSKSDVGLQNAAECMPLIMEPMSAFYTSPLVVLDFQSLYPSVMIAYNYCYSTCLGRIK 946
Query: 541 PEDAR------KLNLPP-------ECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
P L+L P E + P+G +VKSN++KG+L +L ELL R
Sbjct: 947 PFQGNYKFGVTNLDLGPGILDALQEHITVAPNGIMYVKSNVRKGLLGRMLVELLNTRVMV 1006
Query: 588 KADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K LK AK D VL RQLALK AN YG+T AT G++P +EI+ S+ GR+ +
Sbjct: 1007 KQALKSAKSDKALARVLHARQLALKYIANVTYGYTSATYSGRMPAVEIADSIVQTGRETL 1066
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E + G + A V+YGDTDS+ V T E A ++G E AD ++
Sbjct: 1067 EKAIDFIN------GSEKWGARVVYGDTDSLFVYLPGKTREQAFRIGNEMADAVTRQNPV 1120
Query: 706 PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECL 764
PIKL+FEKVY P +L++KKRY G + NP++ + + D KGIETVRRD L + LV L
Sbjct: 1121 PIKLKFEKVYLPCVLMAKKRYVGFKYENPDETEPEFDAKGIETVRRDGVLAQRKLVENSL 1180
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL-TKTGDDYEVKAAHVELAERM 823
+ +D+ Y + ++ N++ + + K + T + +A R
Sbjct: 1181 KILFRTQDLSQVKDYCCRSWYQIMENKVPIQDFIFAKEVRMGTYSEKGPPPPGAVVAARR 1240
Query: 824 RKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPL 882
D P GDR+PY+I + GA ER+ DP+ ++ + + +D YY+ + PL
Sbjct: 1241 MVLDPNDEPQYGDRIPYIISRGEPGALLAERALDPLEMINDPRLQLDALYYITRVLIPPL 1300
Query: 883 LRIFE-------------PILKNASKELLSG---------DHTRSISISTPSNSGIMKFA 920
R+F P + N EL D R S S+P + +
Sbjct: 1301 ERVFNLVGADVRQWFAEMPKISNTVSELALASPGRRRKVEDSDREESPSSPGRRDLEEHL 1360
Query: 921 KRQLSCIGCK--ALISNGTLCSHC---KGREAELYCKTVSQVQELEVLFGRLWTQCQECQ 975
+ C+ C + LC C + + +E + ++ C
Sbjct: 1361 ENN-QCLVCGEVSFTERTELCEECIFLPQTSLTILGAKTGRREERMLTTHKVCVTCTSIA 1419
Query: 976 GSLHQDVLCTSRDCPIFYRRKKAQK--DMAEA 1005
S + V C DCP FY RK+A+ DM E
Sbjct: 1420 PS--EPVECECLDCPWFYARKRAEHKLDMIET 1449
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 94 QQLDIDYVI---GDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQG 150
Q IDYV+ G +R P I+RIFG + G C VH PY YI +
Sbjct: 5 QIYQIDYVLSPPGPLDRSHYP----RVPILRIFGQSSVGLRTCLHVHQVYPYCYI---EY 57
Query: 151 MGPDDISHFHQILEGRMREANR----------NSKVPQFVRHIEMVQKRSIMYYQQQKSQ 200
G D+ H Q + + N NS Q+V + +V+ + Q S
Sbjct: 58 QGDLDLRHVKQYVRKFKKSLNHAIALSLKRDPNSTKSQYVCAVVLVKGVKFYGFHSQYS- 116
Query: 201 PFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVG 255
PFLKI++ P ++ IL G + + F YES++ F L+FM D + G
Sbjct: 117 PFLKIILLDPRLMNRVATILQSGSVMS----QRFPVYESHLSFTLQFMCDFGLYG 167
>gi|83642849|ref|YP_438136.1| ORF9 [Ovine herpesvirus 2]
gi|61970963|gb|AAX58048.1| ORF9 [Ovine herpesvirus 2]
Length = 998
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 284/536 (52%), Gaps = 54/536 (10%)
Query: 401 KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISF 460
K DV + I L G++ R +L +YC++DA L LL M E+A++ +P
Sbjct: 457 KTDVTYKDIPILFRGSSHDRAKLGLYCVQDAVLVLNLLQHFMTHIEITEIAKIANIPPRR 516
Query: 461 LLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDF 520
+++ GQ I+V + LL A+++ ++P + AG+ G Y+GATV+ +GFY P+ +DF
Sbjct: 517 VITDGQQIRVFACLLAAAQEQGYILP-MPTAGATSG-YQGATVINPISGFYNTPVLVVDF 574
Query: 521 ASLYPSIMMAYNLCYSTLVTPEDARKL-NLPP---ECVNKTPSGETFVKSNLQKGILPEI 576
ASLYPSI+ A+NLCYST++ E+ +L P E + FVK + + +L +
Sbjct: 575 ASLYPSIIQAHNLCYSTIIPHENLSNFPDLTPNDYETFFISSGPVHFVKKHKSESLLASL 634
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
L+ LA RK + +L++ +D +A+LD +QLA+K++ NSVYGFTG G LPC+ I+ +
Sbjct: 635 LKTWLAKRKAIRKELEQCQDEKLRAILDKQQLAIKVTCNSVYGFTGVASGMLPCLMIAET 694
Query: 637 VTSYGRQMIEHTKKLVED-------KFTTVGGYEHNAE-------VIYGDTDSVMVQFGV 682
VT GR M+E TK+ VE+ + + +A+ V+YGDTDS+ +
Sbjct: 695 VTLQGRTMLEKTKQFVENLDVQSLQQICPTQTLKIHAQHPTPRFTVVYGDTDSLFINCEG 754
Query: 683 PTVEAAMKLGREAADYISG-TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
++ ++ A + S F PIKLE EKV+ LL++KKRY G+ N K+
Sbjct: 755 FDMDTVLEFSDRLASHTSSLLFSAPIKLESEKVFQCLLLLTKKRYVGILSNN-----KIL 809
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQ----------------------- 778
KG++ VR+ C V+++ L IL D ++ A Q
Sbjct: 810 MKGVDLVRKTACTYVQDVTRSVLELILRDSNVKAAAQTLSQQPVASCYKHGLPIGFLAVI 869
Query: 779 -YVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEV-KAAHVELAERMRKRDAATAPNVGD 836
+ + SDL NR+ L+ L + +K +Y+ H+ + +++ +R+ P V D
Sbjct: 870 DILNQSYSDLKNNRVPLARLTYSTEFSKPFSEYKTSNLPHLAVYKKLAERNEEL-PQVHD 928
Query: 837 RVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKN 892
R+ YV ++A+ G+ + +EDP Y +N +P+ + +Y + I + + I + + KN
Sbjct: 929 RISYVFVEAS-GSLVSDMAEDPNYAEQNKLPVASDWYFDKVI-RGVANILQCLFKN 982
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 170/359 (47%), Gaps = 47/359 (13%)
Query: 49 LLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVS-QCQSI-MFQQLDIDYVIGDSN 106
+LP ++ SL + D++ R L + + Y S +C SI + Q DI
Sbjct: 65 ILPGNKPSLWVNDVKLRGPDGEDLTFHVYDIVEATYSSDKCDSIPLHLQADI-------- 116
Query: 107 RELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGR 166
+P S ++++FG T +G SVC V G YFY+ D ++ + ++
Sbjct: 117 ---VP----SGIVLKLFGRTEDGRSVCVNVFGQRVYFYVH------HDSYANLQRDVQHV 163
Query: 167 MREA-NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQ 225
++E+ +R++ V HI V K+ + Y S+ + + P M G+ + G Q
Sbjct: 164 LQESGHRSAGV-----HIATVHKKFLNGYSTSSSEVRQITLWSSPAMRNLANGLSNMGYQ 218
Query: 226 LDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYS 285
+ +E+NV + RF+ID W R + S+ QLE+DC
Sbjct: 219 V----------FEANVDASTRFIIDNQFSTFGWYTCSNFSARASDHRDSHTQLEYDCAVG 268
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLV-TLQGEKQPF 342
D+ ++ + ILSFDIEC G G FP D +IQ++ + T+ E P
Sbjct: 269 DVRFDPHRLDWPH---YNILSFDIECLGECG-FPTADRDEDIIIQISCAIWTVGCESGPK 324
Query: 343 IRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ ++ + +CAP+ G+DV F +E D+L A+ IR+ +++ GYNIC FD PY++++
Sbjct: 325 LI-LLCVGTCAPLDGIDVYEFPSEMDLLYAFFTLIRDYGVEIITGYNICNFDFPYVLDR 382
>gi|322795808|gb|EFZ18487.1| hypothetical protein SINV_12915 [Solenopsis invicta]
Length = 1861
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 194/602 (32%), Positives = 290/602 (48%), Gaps = 42/602 (6%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGS 493
+LL+ L I E AR+ G+ + SRG +V S +LR AK N + P++ Q
Sbjct: 1263 KLLNHLDIIGRTCEHARLFGIQFYEVFSRGSQFRVESMMLRLAKPMNYIPISPSMHQRAK 1322
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT---------PED- 543
+ ++E + FY P+ LDF SLYPS+++AYN C+ST + P D
Sbjct: 1323 MRAPECLPLIMEPESKFYTDPLVVLDFQSLYPSMIIAYNYCFSTCLGRIEHIGQYGPFDF 1382
Query: 544 -ARKLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLK--E 593
A L + +N +P G FVK +++GILP +L E+L R K +K
Sbjct: 1383 GAATLRIRKNTALKLQGKINFSPCGVAFVKKEVRQGILPRMLTEILNTRLMVKESMKLHP 1442
Query: 594 AKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLV 652
AK+ + VL +QL LK+ AN YG+T A G++PCIEI SV S GR+ +E KLV
Sbjct: 1443 AKNRTLQRVLHSQQLGLKLIANVTYGYTSANFSGRMPCIEIGDSVVSKGRETLERAIKLV 1502
Query: 653 EDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFE 712
E GG V+YGDTDS+ V + E A +G E AD ++ P+KL+FE
Sbjct: 1503 ETT-PKWGG-----RVVYGDTDSLFVLLPGKSREEAFTIGEEIADAVTAINPPPVKLKFE 1556
Query: 713 KVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDR 771
KV YP +L +KKRY G +Y T ++ + KGIETVRRD C V ++ + L + +
Sbjct: 1557 KVLYPSILQTKKRYCGYMYETRDQEKPEFLAKGIETVRRDGCPAVSKILEKALKVLFETK 1616
Query: 772 DIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAA 829
D+ QYV + R+ + L K + Y+ A +EL R+ K+D
Sbjct: 1617 DVSLVKQYVTRQFDKIFQRRVSILDLTFAKEF-RGMHGYKANACVPALELTRRLMKKDPR 1675
Query: 830 TAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN--IPIDTHYYLENQISKPLLRIFE 887
P +RV YVII A P+ V+ + IP ++ YY+ I PL R F
Sbjct: 1676 AVPRTSERVRYVIIAGAPNQALIHCVRTPMEVVADPSLIP-NSVYYITKVIIPPLNRCFN 1734
Query: 888 PILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQL----SCIGCKALISNGTLCSHCK 943
+ + H + +K RQ +CI C +N +C C
Sbjct: 1735 LFGIDINAWYKEISHRSNFDNIANLGGNNLKSTIRQFFSSTACITCGEQ-TNKEICPDCL 1793
Query: 944 GREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMA 1003
+ + ++++LE + ++ C C G L D+ C S DCP+ YR +A+K++A
Sbjct: 1794 LQPTRTVLVLLEKIKQLEKNYQQITAICHSCIGQL-GDIECVSLDCPVLYRMAQARKELA 1852
Query: 1004 EA 1005
+A
Sbjct: 1853 QA 1854
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 36/203 (17%)
Query: 129 GHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN-SKVPQFVRHIEMVQ 187
G C +HG PY Y+ C D SH +Q+ N + +H+ +Q
Sbjct: 1 GKKTCLHIHGVFPYMYVPCTVQENTD--SHAYQLAAAIDSALNTSFGSALSTNQHVYKIQ 58
Query: 188 KRSIM--YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFAL 245
+ S + Y +K F KI P ++ +L G+ L+ ++ YE+++ + +
Sbjct: 59 RVSGIPFYGYHEKEHLFFKIYFYNPAIIKRTADLLQNGVILN----QTLQPYEAHIPYIM 114
Query: 246 RFMIDCNIVGGNWIEVPVGKYRKTAKTL---------------------------SYCQL 278
+FMID N+ G N I + KYR+ ++ S C+L
Sbjct: 115 QFMIDYNLYGMNLINLNSVKYRQLSQGCITEDSQSKSSMDLLDLPEYLPSSVTRQSMCEL 174
Query: 279 EFDCLYSDIISRHPEGEFSKMAP 301
E D S+I++R E ++ P
Sbjct: 175 EVDVHASEILNRQGVNEKLELNP 197
>gi|258573513|ref|XP_002540938.1| hypothetical protein UREG_00451 [Uncinocarpus reesii 1704]
gi|237901204|gb|EEP75605.1| hypothetical protein UREG_00451 [Uncinocarpus reesii 1704]
Length = 1482
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 195/628 (31%), Positives = 302/628 (48%), Gaps = 49/628 (7%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
++ Y + L ++LD I E AR+ G+ + SRG KV S + R AK +
Sbjct: 848 KVVNYLIARTKLNLKILDANELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPE 907
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N ++ P+ Q G + V+E ++ FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 908 NFILISPSKAQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFL 967
Query: 540 TP-EDARKLN---------------LPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
D R N L + +N +P+G + K ++K +L ++L E+L
Sbjct: 968 GRIVDWRGRNKMGFIDYQRQQGLLELLQDQINISPNGIMYTKPEVRKSLLAKMLTEILET 1027
Query: 584 RKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K +K K D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1028 RVMVKGGMKANKEDRALQRLLNNRQLALKLIANVTYGYTSASFSGRMPCTEIADSIVQTA 1087
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E L+ +V + AEV+YGDTDS+ + T + A LG E A I+
Sbjct: 1088 RETLEKAIALIH----SVERW--GAEVVYGDTDSLFIYLKGRTRDEAFDLGEEIAKTITD 1141
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLV 760
+P+KL+FEKVY+P +L++KKRY G Y T +K + D KGIETVRRD + +
Sbjct: 1142 RNPRPVKLKFEKVYHPCVLLAKKRYVGYKYETRDQKKPEFDAKGIETVRRDGTPAEQKIE 1201
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA----AH 816
+ L + D+ +Y + + ++ R+ + K + K G Y K
Sbjct: 1202 EKALRILFETADLSQIKKYFQKQCAKIMQGRVSIQDFCFAKEV-KLG-SYSEKGPPPPGA 1259
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLE 875
+ A+RM + D P G+RVPYV+I A GA+ +R P +L++ + +D YY+
Sbjct: 1260 LISAKRMLE-DPRLEPQYGERVPYVVISGAPGARLIDRCVAPEVLLQDPQMELDAEYYIS 1318
Query: 876 NQISKPLLRIFEPILKNASK-----------ELLSGDHTRSISISTPSNSGIMKFAKRQL 924
I PL RIF + N + G S T + + K
Sbjct: 1319 KNIIPPLERIFNLVGANVRQWYDEMPKYQRMRRTDGAMIPSCKDGTLLRKTLESYMKSS- 1377
Query: 925 SCIGCK-ALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD-V 982
SC C+ L S+ LC+ C + + ++Q E + C+ C G D V
Sbjct: 1378 SCAVCREKLESDQPLCNSCLQQPQTALMRLQYRIQRAERRVTDVHEVCRSCMGVPWGDEV 1437
Query: 983 LCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
C S+DCP+FY R + +++ + LD
Sbjct: 1438 KCDSKDCPVFYSRTRTTSNLSYTRALLD 1465
>gi|344301399|gb|EGW31711.1| DNA polymerase zeta [Spathaspora passalidarum NRRL Y-27907]
Length = 1519
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 193/607 (31%), Positives = 305/607 (50%), Gaps = 78/607 (12%)
Query: 448 VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEAR 507
VE +R+ G+ + RG KV S L R K ++L++ + S+Q
Sbjct: 920 VEHSRLIGIEFNANFYRGSQFKVESILARLTKSESLLL----NSPSKQQ----------- 964
Query: 508 AGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDA-----------RKLNLPP----- 551
+ P+ LDF SLYPSIM+AYN CYSTL+ + L +PP
Sbjct: 965 ----KSPLVVLDFQSLYPSIMIAYNYCYSTLLGKLNNFSPNMNDIGYLDNLKIPPGMIDL 1020
Query: 552 ----ECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLDGR 606
+N +P+G FVKSN++K IL ++LEE LA R + KA K +D E V + R
Sbjct: 1021 LKKDNAINISPNGFIFVKSNVRKSILAKMLEEFLALRIKVKAVTKSFRDDTELTRVYNSR 1080
Query: 607 QLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHN 665
QLALK+ AN YG+T AT G++P +IS ++ S GR+++ + +L+E G Y
Sbjct: 1081 QLALKLIANVTYGYTSATFSGRMPNSDISDAIVSTGREILMKSIELIE-----AGNY--G 1133
Query: 666 AEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKR 725
A+V+YGDTDS+ V F + + A KLG+ A YI+ F P+KL+FEKVY+P +L++KKR
Sbjct: 1134 AKVVYGDTDSLFVYFPGKSKDEAFKLGKSIAQYITSVFPDPVKLKFEKVYHPCVLLTKKR 1193
Query: 726 YAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTI 784
Y G Y +K K D KGIETVRRD + + L + +++ +Y
Sbjct: 1194 YVGYAYEYEDQKVPKFDAKGIETVRRDGIPAQSKMTEKALRILFETQNLSKVKEYTLKQF 1253
Query: 785 SDLLMNRMDLSLLVITKGL---TKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYV 841
+ +N++ + K + T + Y A V A +M + D P +RVPYV
Sbjct: 1254 YKISINKISVQDFCFAKEVRYGTYKNEKYLPPGAVV--ANKMVEDDPRKEPQYRERVPYV 1311
Query: 842 IIKAAKGAKAYER---SEDPIYVLENNIP--IDTHYYLENQISKPLLRIFEPI---LKNA 893
II+ A + +R ED I + + P +D YY+ + PL R+F + +K
Sbjct: 1312 IIQDATKHRIKDRCISPEDLIASYKTDKPLMLDYEYYITRVLIPPLARVFNLLGVDVKGW 1371
Query: 894 SKELLSGDHTRSISISTPSNSGIMKFAK-RQLSCIGC--KALISNGTLCSHCKGREAELY 950
+EL S +RS + N G+++ +C+ C K ++N +CS C E +L
Sbjct: 1372 YRELPSFSQSRSRLL---RNDGLLQSGVLNSHTCLSCHEKLDLNNSMVCSSCTSDEQQLV 1428
Query: 951 CKTVSQVQELEVLFGRLWTQCQECQ----GSLHQDVL------CTSRDCPIFYRRKKAQK 1000
S+ +E E+ +L C++C G+ ++ C+++DC ++Y++ ++Q
Sbjct: 1429 ATICSECRENELRVRKLEKLCKDCVYSAFGNKGNNITNQSAENCSNKDCSVYYKKFRSQN 1488
Query: 1001 DMAEAKL 1007
D +K
Sbjct: 1489 DRDLSKF 1495
>gi|358369172|dbj|GAA85787.1| DNA polymerase zeta catalytic subunit [Aspergillus kawachii IFO 4308]
Length = 1675
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 193/658 (29%), Positives = 313/658 (47%), Gaps = 52/658 (7%)
Query: 397 YLIEKEDVHHSI--ISDL-QNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARV 453
+L+ + H+S ++D ++G ++ Y + + +L+ I E AR+
Sbjct: 1010 HLLHRRVPHYSFQDLTDWYRSGKPRNILKVVEYFVSRVQMDLEILESNELIPRTSEQARL 1069
Query: 454 TGVPISFLLSRGQSIKVLSQLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEARAGFY 511
G+ + SRG KV S + R AK +N LV P+ KQ G + V+E ++ FY
Sbjct: 1070 LGIDFFSVFSRGSQFKVESLMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSDFY 1129
Query: 512 EKPIATLDFASLYPSIMMAYNLCYSTLVT----------------PEDARKLNLPPECVN 555
P+ LDF SLYPSIM+AYN CYST + R L L + +N
Sbjct: 1130 TSPLVVLDFQSLYPSIMIAYNYCYSTFLGRAHQWRGRNKMGFTDYKRQPRILELLQDKIN 1189
Query: 556 KTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAV---LDGRQLALKI 612
P+G + K ++K +L +L E+L R K +K KD +KA+ L+ RQLALK+
Sbjct: 1190 IAPNGMIYAKPEVRKSLLARMLAEILETRVMVKNGMKLDKD--DKALQRLLNNRQLALKL 1247
Query: 613 SANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYG 671
AN YG+T A+ G++PC EI+ S+ GR+ +E + +V + AEV+YG
Sbjct: 1248 IANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEKAIAFIH----SVERW--GAEVVYG 1301
Query: 672 DTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-Y 730
DTDS+ V T + A +G E A ++ P+KL+FEKVY+P +L++KKRY G Y
Sbjct: 1302 DTDSLFVYLKGRTRDEAFTIGEEIAKAVTSINPHPVKLKFEKVYHPCVLLAKKRYVGFKY 1361
Query: 731 WTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMN 790
+K + D KGIETVRRD + + + L + D+ +Y +S + ++
Sbjct: 1362 EHRDQKEPEFDAKGIETVRRDGTPAEQKIEEKALKLLFRTADLSQVKRYFQSQCTKIMQG 1421
Query: 791 RMDLSLLVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGA 849
R+ + + + T D + ++ + D + P G+RVPYV++ A GA
Sbjct: 1422 RVSVQDFCFAREVRLGTYSDRGLPPPGALISTKKMIADPRSEPQYGERVPYVVVTGAPGA 1481
Query: 850 KAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDHTRS 905
+ +R P +L + ++ +D YY+ + PL RIF + N + E+ R
Sbjct: 1482 RLIDRCVPPETLLHDPHLDLDADYYITKNLIPPLERIFNLVGANVRQWYDEMPKVQRVRR 1541
Query: 906 IS----------ISTPSNSGIMKFAKRQLSCIGCKALI--SNGTLCSHCKGREAELYCKT 953
+ ++ R +CI CK + ++ LC +C + +
Sbjct: 1542 VEGAMIRGPGGGGGGGGGRRTLESYMRASTCIVCKTKLRDTDTPLCGNCSRQPHLAMFEL 1601
Query: 954 VSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
VS+ + E L C+ C G + +V C S+DCP+FY R + + + K LD
Sbjct: 1602 VSRQRAAEKRVVDLQRICRSCMGVTFGDEVKCDSKDCPVFYSRTRDEANWRYTKAVLD 1659
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 110 LPLSSGSAA--------IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQ 161
LP G+A +IRIFG T G VC VHG PY Y+ + + +S +
Sbjct: 25 LPYRDGAAGKNDRSKVPVIRIFGATETGQKVCVHVHGAFPYLYVEYDGDLETEKVSSAIR 84
Query: 162 ILEGRMREA-------NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMV 213
L + A N N+K FV HI +V + + +Y F KI + P +
Sbjct: 85 SLRLSIDHALAVSYNRNENAKKIAFVAHITLV--KGVPFYGYHVGYKFYFKIYLMNPIYM 142
Query: 214 ASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+L +G L + YES++ F ++M D ++ G +++ K+R
Sbjct: 143 TRLADLLLQGAVL----KRPLQPYESHLQFVPQWMCDYSLYGCAYLKCSKVKFR 192
>gi|367021872|ref|XP_003660221.1| hypothetical protein MYCTH_2298247 [Myceliophthora thermophila ATCC
42464]
gi|347007488|gb|AEO54976.1| hypothetical protein MYCTH_2298247 [Myceliophthora thermophila ATCC
42464]
Length = 1749
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 211/709 (29%), Positives = 336/709 (47%), Gaps = 76/709 (10%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS--IISDLQ-NGNAETRR 421
T R ++ WR E+D ++ Y++ + +L+ + H S ++D +G
Sbjct: 1033 TGRHIINIWRAMRGELD---LLQYSMENV-VWHLLHRRIPHFSWRALTDWWLSGRPRDIG 1088
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
++ Y L+ + +L+ I E AR+ GV + SRG KV S + R AK +
Sbjct: 1089 KVLRYYLRRTRMDIEILEANELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1148
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-- 537
N LV P+ KQ G++ V+E + FY P+ LDF SLYPS+M+AYN CYST
Sbjct: 1149 NFLLVSPSRKQVGAQNALECLPLVMEPHSAFYPSPLLVLDFQSLYPSVMIAYNYCYSTCL 1208
Query: 538 --LVTPEDARKLN------------LPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
+V+ KL L + +N P+G + K ++K +L ++L E+L
Sbjct: 1209 GRIVSWRGTNKLGFTDYRRREGLLKLLKDHINIAPNGMMYTKPEIRKSLLAKMLTEILET 1268
Query: 584 RKRAKADLKEAKD--PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K+ +KE KD L+K +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1269 RMMVKSGMKEDKDDRTLQK-LLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQT 1327
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
GR+ +E + +V + AEV+YGDTDS+ V T E A +G E A+ I+
Sbjct: 1328 GRETLERAIAYIH----SVERW--GAEVVYGDTDSLFVYLKGKTREQAFDIGAEIAEEIT 1381
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+P+KL+FEKVY+P +L++KKRY G Y + + + D KGIETVRRD + +
Sbjct: 1382 KLNPRPVKLKFEKVYHPCVLLAKKRYVGYKYESRDQTVPEFDAKGIETVRRDGTPAEQKI 1441
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ L + D+ +Y +S S ++ + + V K + + G Y K
Sbjct: 1442 EEKALRILFETADLSQVKEYFQSQCSKIMRGAVSVQDFVFAKEV-RLG-SYSAKGPGPPG 1499
Query: 820 AERMRKR---DAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLE 875
A KR D P G+RVPYV++ A GA+ +R P +L + + +D YY+
Sbjct: 1500 ALISTKRMLEDQRAEPQYGERVPYVVMAGAPGARLIDRCVAPEDLLNDPHASLDADYYIS 1559
Query: 876 NQISKPLLRIFEPILKNASK---ELLSGDHTRSISISTP--------------SNSG--- 915
+ PL RIF + N E+ R + ++ +N+G
Sbjct: 1560 KNLIPPLERIFNLVGANVRAWYDEMPKVQPVRRLETTSALTATTRATTANRHGNNTGRDT 1619
Query: 916 ---IMKFAKRQLSCIGCKALISNG---------TLCSHCKGREAELYCKTVSQVQELEVL 963
++F SC+ C +S+ LC C + +++ +
Sbjct: 1620 GKKTLEFFMSSTSCLACNVKMSSKPVDEQQRPLPLCGRCAAAPSTTMALLRARLSAEQRR 1679
Query: 964 FGRLWTQCQECQG--SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
+ + CQ C G L +V C SRDCP+FY R K + +A + L+
Sbjct: 1680 YDDVVRVCQSCAGFAPLEGEVPCDSRDCPVFYTRVKQRARVAAERRTLE 1728
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 20/160 (12%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDD-------ISHFHQILEGRMREAN 171
+IR+FG T G VC +HG PY +I + GP D I H ++ + +
Sbjct: 42 VIRVFGSTETGQKVCAHIHGAFPYLFI---EYRGPLDKPTVSEYIYRLHLSIDRALAVSY 98
Query: 172 RNSK---VPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLD 227
R + P FV + +V + + +Y F LKI + P +++ +L +G+
Sbjct: 99 RRDQYREAPSFVARVTLV--KGVPFYGFHVGYRFYLKIYMLNPAVMSRLADLLLQGVV-- 154
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+G K F YE+++ + L+FM D N+ G ++++ K+R
Sbjct: 155 -MGQK-FQPYEAHLQYLLQFMTDYNLYGCDYLDAENVKFR 192
>gi|238505487|ref|XP_002383968.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus flavus
NRRL3357]
gi|220690082|gb|EED46432.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus flavus
NRRL3357]
Length = 1430
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 301/634 (47%), Gaps = 44/634 (6%)
Query: 413 QNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLS 472
Q+G ++ Y + + +L+ + E AR+ G+ + SRG KV S
Sbjct: 789 QSGKPRDLMKVVDYFVSRVQMNLEILESNELVPRISEQARLLGIDFYSVFSRGSQFKVES 848
Query: 473 QLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMA 530
+ R AK +N LV P+ KQ G + V+E ++ FY P+ LDF SLYPSIM+A
Sbjct: 849 LMFRIAKPENFLLVSPSKKQVGQQNALECLPLVMEPQSDFYTSPLIVLDFQSLYPSIMIA 908
Query: 531 YNLCYSTLVT----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILP 574
YN CYST + R L L + +N P+G + K +++ +L
Sbjct: 909 YNYCYSTFLGRVHQWRGRDKMGFTEYQRQPRLLELFKDKINIAPNGMMYAKPEVRRSLLA 968
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAV---LDGRQLALKISANSVYGFTGATV-GQLPC 630
+L E+L R K +K KD +KA+ L+ RQLALK+ AN YG+T A+ G++PC
Sbjct: 969 RMLAEILETRVMVKTGMKMDKD--DKALQRLLNNRQLALKLIANVTYGYTSASFSGRMPC 1026
Query: 631 IEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMK 690
EI+ S+ GR+ +E L+ +V + AEV+YGDTDS+ V T + A
Sbjct: 1027 SEIADSIVQSGRETLEKAIALIH----SVERW--GAEVVYGDTDSLFVYLKGRTRDEAFD 1080
Query: 691 LGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVR 749
+G E A ++ T P+KL+FEKVY+P +L++KKRY G Y +K + D KGIETVR
Sbjct: 1081 IGEEIAKAVTETNPSPVKLKFEKVYHPCVLLAKKRYVGFKYEHRDQKEPEFDAKGIETVR 1140
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGD 808
RD + + + L + D+ +Y + + +L R+ + + + T
Sbjct: 1141 RDGTPAEQKIEEKALKLLFRTADLSQVKRYFQKQCTKILQGRVSIQDFCFAREVKLGTYS 1200
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIP 867
+ + ++ + D P G+RVPYV++ A G++ +R P +L + +
Sbjct: 1201 ERGLPPPGALISTKKMLEDPRLEPQYGERVPYVVVTGAPGSRLIDRCVPPETLLHDAQLE 1260
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDHTRSI-----SISTPSNSGIMKF 919
+D YY+ I PL RIF + N + E+ R + S + ++
Sbjct: 1261 LDAEYYITKNIIPPLERIFNLVGANVRQWYDEMPKVQRIRRVEGTVTSTGKDARKTTLES 1320
Query: 920 AKRQLSCIGCKALISNGT--LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG- 976
+ +CI CKA + + +C+ C + V++ + E L C+ C G
Sbjct: 1321 YMKSSTCIVCKAKLDDTDVPVCAECIRQPHISLLDLVTRQRHAEKSVSDLLRVCRSCMGV 1380
Query: 977 SLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
+V C S+DCP+FY R + + K LD
Sbjct: 1381 PFGDEVKCDSKDCPVFYSRTRYVANWRHTKAVLD 1414
>gi|171676135|ref|XP_001903021.1| hypothetical protein [Podospora anserina S mat+]
gi|170936133|emb|CAP60793.1| unnamed protein product [Podospora anserina S mat+]
Length = 1751
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 214/711 (30%), Positives = 328/711 (46%), Gaps = 108/711 (15%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R V+ WR E++ ++ Y + + +L+ + H S + ++G
Sbjct: 1035 TGRHVINVWRAMRGELN---LLQYTMENV-VWHLLHRRMPHFSWKDLTEWYKSGRPRDLA 1090
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
++ Y LK + +L+ I E AR+ GV + SRG KV S + R AK +
Sbjct: 1091 KVLRYHLKRTRMNIEILEANELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1150
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-- 537
N LV P+ KQ G++ V+E + FY P+ LDF SLYPS+M+AYN CYST
Sbjct: 1151 NFLLVSPSRKQVGAQNALECLPLVMEPLSSFYTSPVLVLDFQSLYPSVMIAYNYCYSTCL 1210
Query: 538 --LVTPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
+V K L L +N P+G + K ++K +L ++L E+L
Sbjct: 1211 GRIVNWRGTNKMGFTEYKRREGLLKLLEPHINIAPNGLMYTKPTIRKSLLAKMLTEILET 1270
Query: 584 RKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1271 RVMVKSGMKQDKDDKTLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTG 1330
Query: 642 RQMIEHTKKLVE--DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
R+ +E + D++ AEV+YGDTDS+ V T E A LGRE A+ I
Sbjct: 1331 RETLERAIAYIHSVDRW--------KAEVVYGDTDSLFVHLPGRTREQAFALGREMAEEI 1382
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLLVKN 758
+ +P+KL+FEKVY P +L++KKRY G + +P ++ + D KGIETVRRD +
Sbjct: 1383 TDMNPRPVKLKFEKVYQPCVLLAKKRYVGYKYEHPGQEVPEFDAKGIETVRRDGTPAEQM 1442
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA---A 815
+ + L + D+ Y ++ S ++ + + + + K G Y K A
Sbjct: 1443 IEEKALRILFETADLSKVKAYFQTQCSKIMKGSVSVQDFCFAREV-KLG-SYSAKGPGPA 1500
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP----IDTH 871
+A + DA P G+RVPYV++ A GA+ +R P +LE + +D
Sbjct: 1501 GALIAGKKMSEDARAEPQYGERVPYVVVTGAPGARLIDRCVAPEELLERGVTEGLELDAE 1560
Query: 872 YYLENQISKPLLRIFEPILKNAS---------KELLSGDHTRSISISTPSNSGIMKFAKR 922
YY+ + PL RIF + N + + G R++S + AK+
Sbjct: 1561 YYIGKNLIPPLERIFNLVGANVRAWYEEVPKVQMVKKGQQQRAVS----DGENVGAKAKK 1616
Query: 923 QL-------SCIGCKALISNGT----------------LCSHCKGREAELYCKTVSQVQE 959
L +C+ C ++ LC CK E EL
Sbjct: 1617 TLEHFLASRTCLACGVKMAPAPPAPAFAEEVDEEEKMPLCERCK--EDELGT-------- 1666
Query: 960 LEVLFGRLWTQ----------CQECQG-----SLHQDVLCTSRDCPIFYRR 995
+ VL GRL +Q CQ C G Q+V C S+DCP+FY R
Sbjct: 1667 MVVLQGRLNSQRKGYNDLVKICQSCVGLGSWDGGDQEVKCDSKDCPVFYSR 1717
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 33/176 (18%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYI----------------SCPQGMGPDD---ISHF 159
++R+FG T G VC +HG PY Y+ S GP D +S F
Sbjct: 42 VVRVFGSTETGQKVCAHIHGAFPYLYVEYRGPLEKKLGKAACHSLNAQDGPSDTAVVSEF 101
Query: 160 HQILEGRMREA-------NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPT 211
L + +A +R+ +FV I +V + + +Y F LK+ + P
Sbjct: 102 ILKLHASIDQALAVSYRRDRDRDRSRFVARITLV--KGVPFYGFHVGYRFYLKLYMLNPL 159
Query: 212 MVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
++ +L +G ++ + F YE+++ F L+FM D N+ G ++IEV ++R
Sbjct: 160 VMTRLADLLQQGSIMN----RKFQPYEAHLQFLLQFMTDYNLYGCDYIEVGNVRFR 211
>gi|212544614|ref|XP_002152461.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
marneffei ATCC 18224]
gi|210065430|gb|EEA19524.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
marneffei ATCC 18224]
Length = 1655
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 197/687 (28%), Positives = 320/687 (46%), Gaps = 74/687 (10%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRR-- 422
T R ++ WR E++ ++GY + L + + H DL ++ R
Sbjct: 961 TGRHMINIWRAMRSELN---LLGYTMENVVFHLLHRR--IPHYPFKDLTRWFTGSKPRNI 1015
Query: 423 --LAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
+ Y L L +LD I E AR+ GV + SRG KV S + R AK
Sbjct: 1016 MKVVEYYLSRVQLDLEILDTNELIPRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKP 1075
Query: 481 KNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
+N ++ P+ KQ G + V+E ++ FY P+ LDF SLYPSI++AYN CYST
Sbjct: 1076 ENFILISPSRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIIIAYNYCYSTF 1135
Query: 539 VTPED----------------ARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLA 582
+ D R L L + VN P+G + K ++K +L +L E+L
Sbjct: 1136 LGRLDNWRGRGKMGFTEYKRQERILELLKDHVNIAPNGMIYAKPEIRKSLLARMLSEILE 1195
Query: 583 ARKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K+ +K KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1196 TRVMVKSGMKADKDDKTLQQLLNHRQLALKMIANVTYGYTSASFSGRMPCSEIADSIVQT 1255
Query: 641 GRQMIEHTKKLVE--DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
R+ +E + D++ AEV+YGDTDS+ + T + A +G E +
Sbjct: 1256 ARETLERAIAFIHSVDRW--------GAEVVYGDTDSLFISLKGRTRDEAFTIGEEISKA 1307
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVK 757
++ +P+KL+FEKVY+P +L++KKRY G + + ++ + D KGIETVRRD +
Sbjct: 1308 VTKMNPRPVKLKFEKVYHPCVLLAKKRYVGFKYEHRDQVEPDFDAKGIETVRRDGTPAEQ 1367
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKG--LTKTGDDYEVKAA 815
+ + L + D+ Y + ++ R+ + + L ++ + A
Sbjct: 1368 KIEEKALKILFRTADLSRVKDYFQKQCLKIMQGRVSVQDFCFAREVRLGTYSENGTLPAG 1427
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYL 874
+ ++M + D P G+RVPYV++ A GA+ +R P +L N ++ +D YY+
Sbjct: 1428 ALISTKKMLE-DPRLEPQYGERVPYVVVTGAPGARLIDRCVAPGVLLNNAHLELDAEYYI 1486
Query: 875 ENQISKPLLRIFEPI-------------------LKNASKELLSGDHTRSISISTPSNSG 915
+ PL RIF + ++ A L G++ +IS T
Sbjct: 1487 TKNLIPPLERIFNLVGANVRQWYDEMPKIQRIRRIEGAFTGLGGGNNNAAISKKT----- 1541
Query: 916 IMKFAKRQLSCIGCKALISNGT----LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQC 971
++ + +C+ CK + + LC+ C K SQ+Q+ E L C
Sbjct: 1542 -LESYMKSSTCLICKDKLQDNNNDLPLCNSCASLPHISLFKLTSQLQQAERRTSNLHKIC 1600
Query: 972 QECQG-SLHQDVLCTSRDCPIFYRRKK 997
+ C G +V C S+DCP+FY R +
Sbjct: 1601 RSCMGVPFGDEVSCDSKDCPVFYSRTR 1627
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 47/231 (20%)
Query: 98 IDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS 157
+ + G S R P +IR FG T G VC VHG PY YI G+G D+++
Sbjct: 25 VPFTNGASQRTARP----KVPVIRAFGATETGQKVCAHVHGAFPYLYIEYRGGLGQDEVN 80
Query: 158 HFHQILEGRMREANRNSKVPQ-------FVRHIEMVQKRSIMYYQQQKSQPF-LKIVVAL 209
+ + L + A NS +V HI +V + + +Y F LKI +
Sbjct: 81 NAIRNLHASIDHALANSYRQNAYDGRVAYVAHISLV--KGVPFYGYHVGYRFYLKIYLLN 138
Query: 210 PTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRK- 268
P + +L +G + + YES++ F ++M D N+ G +++ K+R
Sbjct: 139 PMNIIRLADLLRQGAVMKTM----LQPYESHLQFIPQWMCDYNLYGCAYMDCAKVKFRSP 194
Query: 269 ------------------------TAKTL----SYCQLEFDCLYSDIISRH 291
T++T+ S+C LE D DI++R+
Sbjct: 195 VPEYLELSNLDHRWHDRTIPPKYITSETVLPKQSHCTLEVDVCVQDILNRN 245
>gi|82503268|ref|YP_401712.1| BALF5 [Human herpesvirus 4]
gi|118858|sp|P03198.1|DPOL_EBV RecName: Full=DNA polymerase catalytic subunit
gi|1334913|emb|CAA24805.1| unnamed protein product [Human herpesvirus 4]
gi|23893658|emb|CAD53462.1| DNA polymerase [Human herpesvirus 4]
Length = 1015
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 269/548 (49%), Gaps = 58/548 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+ I L E RRRL +YC++D+ L LL+ + E+A++ +P
Sbjct: 467 KKEDVHYKEIPRLFAAGPEGRRRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCR 526
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L GQ I+V S LL A+++N ++P + S++ Y+GATV++ +GFY P+ +D
Sbjct: 527 RVLDDGQQIRVFSCLLAAAQKENFILP--MPSASDRDGYQGATVIQPLSGFYNSPVLVVD 584
Query: 520 FASLYPSIMMAYNLCYSTLVTP-EDARKLNLPP----ECVNKTPSGETFVKSNLQKGILP 574
FASLYPSI+ A+NLCYST++TP E+ R L P E T FVK ++ + L
Sbjct: 585 FASLYPSIIQAHNLCYSTMITPGEEHRLAGLRPGEDYESFRLTGGVYHFVKKHVHESFLA 644
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
+L LA RK K L +DP ++ +LD +QLA+K + N+VYGFTG G PC+ I+
Sbjct: 645 SLLTSWLAKRKAIKKLLAACEDPRQRTILDKQQLAIKCTCNAVYGFTGVANGLFPCLSIA 704
Query: 635 SSVTSYGRQMIEHTKKLVE--------------DKFTTVGGYEHNAEVIYGDTDSVMVQF 680
+VT GR M+E K VE D + + E VIYGDTDS+ ++
Sbjct: 705 ETVTLQGRTMLERAKAFVEALSPANLQALAPSPDAWAPLNP-EGQLRVIYGDTDSLFIEC 763
Query: 681 -GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
G E AA F+ PI LE EK + +LI+KKRY G+ K
Sbjct: 764 RGFSESETLRFADALAAHTTRSLFVAPISLEAEKTFSCLMLITKKRYVGVLTDG-----K 818
Query: 740 MDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA----------------------- 776
KG+E VR+ C V+ L +L D + A
Sbjct: 819 TLMKGVELVRKTACKFVQTRCRRVLDLVLADARVKEAASLLSHRPFQESFTQGLPVGFLP 878
Query: 777 -VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNV 834
+ + +DL R+ + L + L++ Y+ + H+ + ++ +R+ P +
Sbjct: 879 VIDILNQAYTDLREGRVPMGELCFSTELSRKLSAYKSTQMPHLAVYQKFVERNEEL-PQI 937
Query: 835 GDRVPYVIIK---AAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILK 891
DR+ YV ++ KGA+ E +EDP Y + +P+ +Y +++ + I + +
Sbjct: 938 HDRIQYVFVEPKGGVKGARKTEMAEDPAYAERHGVPVAVDHYF-DKLLQGAANILQCLFD 996
Query: 892 NASKELLS 899
N S LS
Sbjct: 997 NNSGAALS 1004
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 33/298 (11%)
Query: 119 IIRIFGVTR-EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP 177
+I++ G + +G SVC V G + YFY S PQG+ D+ +L ++ + + + P
Sbjct: 126 VIKLLGRRKADGASVCVNVFGQQAYFYASAPQGL---DVEF--AVLSA-LKASTFDRRTP 179
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
V +E V +RSIM Y + KI ++ P V L D G + F
Sbjct: 180 CRVS-VEKVTRRSIMGYGNHAGD-YHKITLSHPNSVCHVATWLQ-----DKHGCRIF--- 229
Query: 238 ESNVLFALRFMIDCNIVGGNWIE----VPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPE 293
E+NV RF++D + V W +P ++R SY +LE+DC D+ R
Sbjct: 230 EANVDATRRFVLDNDFVTFGWYSCRRAIPRLQHRD-----SYAELEYDCEVGDLSVRR-- 282
Query: 294 GEFSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLVTLQGEKQPFIRNVM-TLK 350
E S ++ L+FDIEC G +G FP T+ D ++Q++ ++ GE+ R ++ TL
Sbjct: 283 -EDSSWPSYQALAFDIECLGEEG-FPTATNEADLILQISCVLWSTGEEAGRYRRILLTLG 340
Query: 351 SCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSI 408
+C I GV+V F +E D+L A+ IR++ +++ GYN+ FD PY++++ +SI
Sbjct: 341 TCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYSI 398
>gi|451997476|gb|EMD89941.1| hypothetical protein COCHEDRAFT_1178083 [Cochliobolus heterostrophus
C5]
Length = 1754
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 195/657 (29%), Positives = 314/657 (47%), Gaps = 66/657 (10%)
Query: 405 HHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSR 464
H + + NG ++ Y + L LL+ + E AR+ G+ ++SR
Sbjct: 1067 HLDLTTWYTNGKPRDLAKVLDYFITRVQLNFDLLEATDIVPRTSEQARLLGIDFFAVISR 1126
Query: 465 GQSIKVLSQLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFAS 522
G KV S + R AK +N LV P+ KQ G + V+E ++ FY P+ LDF S
Sbjct: 1127 GSQFKVESTMFRIAKPENFILVSPSRKQVGRQNALECLPLVMEPQSAFYSSPVIVLDFQS 1186
Query: 523 LYPSIMMAYNLCYST----LVTPEDARK------------LNLPPECVNKTPSGETFVKS 566
LYPS+M+AYN CYST +V+ D K L L + +N P+G +VK
Sbjct: 1187 LYPSVMIAYNYCYSTCLGRIVSWRDRNKMGFMDFKREPQLLELVKDHINIAPNGMMYVKP 1246
Query: 567 NLQKGILPEILEELLAARKRAKADLKEAKD--PLEKAVLDGRQLALKISANSVYGFTGAT 624
++K +L +L E+L R K+ +KE KD L+K +L+ RQLALK+ AN YG+T A+
Sbjct: 1247 EMRKSLLANMLGEILETRVMVKSGMKEDKDDKTLQK-LLNNRQLALKLLANVTYGYTSAS 1305
Query: 625 V-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVP 683
G++PC EI+ S+ GR+ +E ++ + AEV+YGDTDS+ +
Sbjct: 1306 FSGRMPCSEIADSIVQTGRETLEKAIAIIH------ATEKWGAEVVYGDTDSLFIHLKGR 1359
Query: 684 TVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDT 742
T + A +G E A I+ +P+KL+FEKVY+P +L++KKRY G Y +K D
Sbjct: 1360 TKDQAFTIGEEIAAAITAANPRPVKLKFEKVYHPCVLLAKKRYVGFKYEHRNQKEPDFDA 1419
Query: 743 KGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK- 801
KGIETVRRD + + + L + D+ Y + + ++ R+ + + +
Sbjct: 1420 KGIETVRRDGTPAEQKIEEKALKLLFRTSDLSQVKSYFQEQCTKIMEGRVSIQDFLFARE 1479
Query: 802 -GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIY 860
L + + + +RM D P G+RVPYV+I +A G + +R +P
Sbjct: 1480 VKLGTYSNKVHLPPGALIATKRMLA-DPRAEPQYGERVPYVVITSAPGTRLIDRCVNPEM 1538
Query: 861 VLENN-IPIDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDHTRSISISTP----S 912
+L+N+ + +D YY+ + PL RIF + N + E+ R+ISI +
Sbjct: 1539 LLQNDHLELDAEYYISRNLIPPLERIFNLVGANVRQWYDEMPKIQRIRNISIPIAPKHDN 1598
Query: 913 NSGIM-----KFAKRQL-------SCIGCKALISNGT-------------LCSHCKGREA 947
N I+ K+ L +C+ C++ + + LC+ C R
Sbjct: 1599 NDDILIGGGHNSLKKTLESYMKSSNCLVCRSKLCPPSSTHFSSSAYAMLPLCAKCVKRPV 1658
Query: 948 ELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKKAQKDMA 1003
++ E + C+ C + ++++ C SRDCP+FY R K + +A
Sbjct: 1659 HSLLALKYRIWNSETRMKEVDAVCRRCANLAWNEEIRCDSRDCPVFYSRIKEKSRLA 1715
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 112 LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF--------HQIL 163
L + +IR FG T G VC +HG PY Y+ + D ++ + Q L
Sbjct: 79 LGAPEVPVIRAFGATETGQKVCAHIHGALPYLYLEYDGSLETDVVNSYILDLRTSIDQAL 138
Query: 164 EGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRG 223
R + K +V HI +V K Y + FLK+ + P + +L +G
Sbjct: 139 ATAYRRNTLDGK-STYVGHISLV-KGVPFYGYHVGYKTFLKVYLLNPMHMTRFADLLHQG 196
Query: 224 IQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
L+ + F YES++ + L++M D N+ G ++I+ ++R
Sbjct: 197 AILN----RVFQPYESHLQYLLQWMCDYNLYGCDYIDCAKVQFR 236
>gi|296804246|ref|XP_002842975.1| polymerase zeta subunit [Arthroderma otae CBS 113480]
gi|238845577|gb|EEQ35239.1| polymerase zeta subunit [Arthroderma otae CBS 113480]
Length = 1625
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 194/627 (30%), Positives = 307/627 (48%), Gaps = 61/627 (9%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGS 493
++L+ I E AR+ G+ + SRG KV S + R AK +N ++ P+ KQ G
Sbjct: 984 QILEANELISRTSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFILISPSRKQVGQ 1043
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LVTPEDARK--- 546
+ V+E ++ FY P+ LDF SLYPSIM+AYN CYST +V+ K
Sbjct: 1044 QNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVSWRGRNKMGI 1103
Query: 547 ---------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKD- 596
L L + +N P+G + K +++K +L ++L E+L R K +KE KD
Sbjct: 1104 TDYEREPGLLGLLKDQINIAPNGIIYAKQDVRKSLLAKMLTEILETRVMIKNGMKEDKDD 1163
Query: 597 -PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVED 654
PL++ +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +E L+
Sbjct: 1164 KPLQR-LLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTARETLEKAIALIH- 1221
Query: 655 KFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKV 714
+V + AEV+YGDTDS+ + T A LG E A I+ + +P+KL+FEKV
Sbjct: 1222 ---SVKRW--GAEVVYGDTDSLFIYLKGRTRAEAFDLGEEIAKTITDSNPRPVKLKFEKV 1276
Query: 715 YYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
Y+P +L++KKRY G Y + ++ D KGIETVRRD + + + L + D+
Sbjct: 1277 YHPCILLAKKRYVGYKYESRNQQEPDFDAKGIETVRRDGTPAEQKIEEKALKLLFETSDL 1336
Query: 774 PGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKR---DAAT 830
+Y + S ++ ++ + K + + G Y K A A KR D
Sbjct: 1337 SRVKEYFQKQCSKIMQGKVSIQDFCFAKEV-RLG-TYSNKGAPPPGALISAKRMLEDPRL 1394
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI 889
P G+RVPYV++ A GA+ +R P +L+N + +D YY+ I PL RIF +
Sbjct: 1395 EPQYGERVPYVVVSGAPGARLIDRCFPPDVLLQNPQLELDAEYYISKNIIPPLERIFNLV 1454
Query: 890 LKNASK---ELLSGDHTRSI--SISTPS-----NSGIMKFAK------RQLSCIGCKALI 933
N + E+ R S++ PS + F K R SC+ C+ +
Sbjct: 1455 GANVRQWYDEMPKYQRMRRTEGSLNAPSGRPGQDGNTTMFKKTLECYMRSSSCVVCRNKL 1514
Query: 934 --------SNGTLCSHCKGREAEL-YCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVL 983
+ +C+ C + + K ++ + E L C+ C G ++V
Sbjct: 1515 NIEEQRQQNRQPICNVCLRTQPHISLLKLEYRMHDSERKVANLQDVCRSCMGVGWGEEVK 1574
Query: 984 CTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
C S+DCP+FY R + ++ + L+
Sbjct: 1575 CDSKDCPVFYSRMRQTSELRHTRALLE 1601
>gi|336383793|gb|EGO24942.1| hypothetical protein SERLADRAFT_361773 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1560
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 186/600 (31%), Positives = 289/600 (48%), Gaps = 47/600 (7%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
+LD+ + E ARV GV ++SRG KV S + R AK ++ V+ P+ + G +
Sbjct: 938 ILDEAETVTKNAEFARVFGVDFFSVISRGSQFKVESFMFRIAKPESFVLLSPSKEDVGKQ 997
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---------TPEDAR 545
++E + FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 998 NAAECMPLIMEPLSAFYNGPLVVLDFQSLYPSIMIAYNYCYSTCLGRVGEFQGQNKFGVT 1057
Query: 546 KLNLPPECVNK-------TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPL 598
+L+ P + K P+G +VKS+++KG+L +L ELL R K +K A+
Sbjct: 1058 ELHHPAGLLQKLQDHITVAPNGIMYVKSDVRKGLLGRMLTELLETRVMVKQAMKSARG-- 1115
Query: 599 EKA---VLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVED 654
KA +LD RQL+LK AN YG+T AT G++P +EI+ S+ GR+ +E +++ +
Sbjct: 1116 NKALGRILDARQLSLKYIANVTYGYTSATYSGRMPAVEIADSIVQSGRETLEKAVRII-N 1174
Query: 655 KFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKV 714
GG +V+YGDTDS+ + T E A ++G++ AD I+ P+KL+FEKV
Sbjct: 1175 ATKKWGG-----KVVYGDTDSLFIYLPGKTKEQAFRIGQDMADTITAMNPAPVKLKFEKV 1229
Query: 715 YYPYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
Y P +L++KKRY G + NP + D KGIETVRRD + + CL + +++
Sbjct: 1230 YLPCVLMAKKRYVGFKYENPDDSVPVFDAKGIETVRRDGVAAQQKMTETCLKILFRTQNL 1289
Query: 774 PGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAP 832
Y + +L N++ + V K + T D +A R +D P
Sbjct: 1290 SEVKDYCTRSWLKILRNKVSIQDFVFAKEVKLGTYSDKVPPPPGATVAARRIMQDENDEP 1349
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILK 891
G+RVPYVI+K ++ +R+ P L N + +D YY+ + PL RIF +
Sbjct: 1350 QYGERVPYVIVKGEPQSRLVDRAVSPEECLRNRRLSLDGAYYISRVLIPPLERIFNLVGA 1409
Query: 892 NASK------ELLSGDHTRSISISTPSNSG--IMKFAK----RQLSCIGCKALISNGTLC 939
+ + + D +S+S N G KF + C+ C AL G +C
Sbjct: 1410 DVRAWYDEMPKTMKVDQVDPLSLSPRKNKGNTTNKFKIDEHFQSSQCLHCGALAQEG-IC 1468
Query: 940 SHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD-VLCTSRDCPIFYRRKKA 998
C+ + + ++ + E C C S + + C + DCP F+ R KA
Sbjct: 1469 DACRRDPQTVIPALLGRIYKAESRMLNTQQICVSCTASAAAEPIRCENYDCPWFFERTKA 1528
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 15/184 (8%)
Query: 86 SQCQSIMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYI 145
SQ ++ Q IDY + L S IIRI+G + C +H PYF+I
Sbjct: 3 SQEPTLQVQINQIDYTLAQPGL-LDNASLPRVPIIRIYGPSSTNQKACVHIHQVYPYFFI 61
Query: 146 SCPQGMGPDDISHFHQILEGRMREA-------NRNSKVPQFVRHIEMVQKRSIMYYQQQK 198
+ PD ++ + L + A N S Q+VR I +V + + +Y
Sbjct: 62 EYNGTINPDSVNRYIAQLTVSLNHAIAISTKRNPTSTNSQYVRAIILV--KGVHFYGFHS 119
Query: 199 S-QPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGN 257
S PFLK+++A P++V I+ G + F YES++ + L+FM D + G
Sbjct: 120 SYTPFLKVLMADPSIVNRAVTIMQSGTVM----RTRFRVYESHLSYILQFMCDFGLYGCG 175
Query: 258 WIEV 261
WI +
Sbjct: 176 WINL 179
>gi|169595886|ref|XP_001791367.1| hypothetical protein SNOG_00690 [Phaeosphaeria nodorum SN15]
gi|160701180|gb|EAT92185.2| hypothetical protein SNOG_00690 [Phaeosphaeria nodorum SN15]
Length = 1584
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 181/617 (29%), Positives = 295/617 (47%), Gaps = 67/617 (10%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSEQGTYEGATVLEA 506
E AR+ GV ++SRG KV S + R AK +N ++ P+ KQ G + V+E
Sbjct: 940 EQARLLGVDFFAVISRGSQFKVESTMFRIAKPENFILISPSRKQVGQQNALECLPLVMEP 999
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT----------------PEDARKLNLP 550
++ FY P+ LDF SLYPS+M+AYN CYST + + + L L
Sbjct: 1000 QSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTCLGRIVSWRGRNKMGFMDFKREPQLLELV 1059
Query: 551 PECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLDGRQLA 609
+ +N P+G +VK ++K +L ++L E+L R K+ +K+ KD + +L+ RQLA
Sbjct: 1060 KDYINIAPNGMMYVKPEMRKSLLAKMLGEILETRVMIKSGMKQDKDDKTLQQLLNNRQLA 1119
Query: 610 LKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEV 668
LK+ AN YG+ A+ G++PC EI+ S+ GR+ +E L+ + AEV
Sbjct: 1120 LKLLANVTYGYASASFSGRMPCSEIADSIVQTGRETLEKAIALIH------ATEKWGAEV 1173
Query: 669 IYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAG 728
+YGDTDS+ + T + A +G E A ++ +PIKL+FEKVY+P +L++KKRY G
Sbjct: 1174 VYGDTDSLFIYLKGRTRDQAFTIGEEIAAAVTAANPRPIKLKFEKVYHPCVLLAKKRYVG 1233
Query: 729 LYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDL 787
+ + + + D KGIETVRRD + + L + D+ Y + +
Sbjct: 1234 FKYEHRNQTEPDFDAKGIETVRRDGTPAEQKIEERALKILFRTADLSQVKSYFQEQCMKI 1293
Query: 788 LMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAA 846
+ R+ + + K + T D +A + D T P G+RVPY++I A
Sbjct: 1294 MQGRISIQDFLFAKEVKLGTYSDRGPPPPGALIATKRMLADPRTEPQYGERVPYIVITGA 1353
Query: 847 KGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDHT 903
GA+ +R D ++ +D YY+ + PL RIF + N + E+
Sbjct: 1354 PGARLIDRCND-------HLELDAEYYISKNLIPPLERIFNLVGANVRQWFDEMPKVQRI 1406
Query: 904 RSIS--ISTPSNSG-----------IMKFAKRQLSCIGCKALISNG-------------- 936
R+++ ++T S++G ++ + SC+ C+A +
Sbjct: 1407 RNVTLPLNTKSDTGNALIGGNNTGKTLESYMKSSSCLVCRAKLPPTPQHIPGVELDAFAL 1466
Query: 937 -TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYR 994
LC C R A V+ E+ + C++C G + +++ C SRDCP+FY
Sbjct: 1467 LPLCPRCLKRPARSLYMLRDLVRSTEIKARDVDLVCRDCSGLAWGEEIRCDSRDCPVFYT 1526
Query: 995 RKKAQKDMAEAKLQLDR 1011
R K + + K + R
Sbjct: 1527 RIKERSKLNGLKESVGR 1543
>gi|67537238|ref|XP_662393.1| hypothetical protein AN4789.2 [Aspergillus nidulans FGSC A4]
gi|18031889|gb|AAL09153.1| polymerase zeta subunit [Emericella nidulans]
gi|40741169|gb|EAA60359.1| hypothetical protein AN4789.2 [Aspergillus nidulans FGSC A4]
gi|259482365|tpe|CBF76778.1| TPA: DNA polymerase (EC 2.7.7.7) [Source:UniProtKB/TrEMBL;Acc:Q8X142]
[Aspergillus nidulans FGSC A4]
Length = 1681
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 180/584 (30%), Positives = 286/584 (48%), Gaps = 40/584 (6%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEA 506
E AR+ G+ + SRG KV S + R AK +N LV P+ KQ G + V+E
Sbjct: 1076 EQARLLGIDFYSVFSRGSQFKVESLMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEP 1135
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARK---------LNLPP------ 551
++ FY P+ LDF SLYPSIM+AYN CYST + + + N PP
Sbjct: 1136 QSDFYTSPLIVLDFQSLYPSIMIAYNYCYSTFLGRVQSWRGRNKMGFLDYNRPPRLLELL 1195
Query: 552 -ECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLDGRQLA 609
+ +N P+G + +S ++K +L ++L E+L R K +K KD + +L+ RQLA
Sbjct: 1196 KDHINIAPNGMIYARSEVRKSLLAKMLTEILETRVMVKTGMKVDKDDRALQRLLNNRQLA 1255
Query: 610 LKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEV 668
LK+ AN YG+T A+ G++PC EI+ S+ GR+ +E + +V + AEV
Sbjct: 1256 LKLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEKAIAFIH----SVERW--GAEV 1309
Query: 669 IYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAG 728
+YGDTDS+ V T + A +G E A ++ P+KL+FEKVY+P +L++KKRY G
Sbjct: 1310 VYGDTDSLFVYLKGRTRDQAFDIGEEIAQAVTNMNPHPVKLKFEKVYHPCVLLAKKRYVG 1369
Query: 729 L-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDL 787
Y +K + D KGIETVRRD + + + L + D+ Y +S + +
Sbjct: 1370 FKYEHRNQKEPEFDAKGIETVRRDGTPAEQKIEEKALKLLFRTADLSQVKSYFQSQCTKI 1429
Query: 788 LMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAA 846
+ R+ + + + T + A ++ + D P G+RVPYV++ A
Sbjct: 1430 MQGRVSVQDFCFARAVKLGTYSENGTLPAGALISTKKMLEDPRAEPQYGERVPYVVVTGA 1489
Query: 847 KGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDH 902
G++ +R P +L++ + +D YY+ I PL RIF + N + E+
Sbjct: 1490 PGSRLIDRCVPPETLLQDAQLDLDAEYYITKNIIPPLERIFNLVGANVRQWYDEMPKVHR 1549
Query: 903 TRSISISTPSNSG-----IMKFAKRQLSCIGCKALISNGTL--CSHCKGREAELYCKTVS 955
R + ++ G ++ + SC+ CKA + + + CS C + + VS
Sbjct: 1550 IRRVEGTSSLAGGKSSIRTLESYMKASSCVVCKAKLYDAEIPVCSDCVRQPHVSLLELVS 1609
Query: 956 QVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKKA 998
+ + E L C+ C +V C S DCP+FY R +
Sbjct: 1610 RQRHAEQRVATLERICRSCMDVPFGDEVKCDSLDCPVFYARTRG 1653
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 100 YVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF 159
Y G++ + +P +IRIFG T G +C VHG PY Y+ + PD +
Sbjct: 27 YRDGNNEKGYMP----KVPVIRIFGTTETGQKICVHVHGAFPYLYVQYDGDLSPDSVRSA 82
Query: 160 HQILEGRMREA-------NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM 212
+ L + A N + K FV HI +V K Y + F KI + P
Sbjct: 83 ARSLHLSIDHALAVSYRRNAHDKKTVFVAHITLV-KGVPFYGYHVGYRFFFKIYLLNPIY 141
Query: 213 VASCRGILDRGIQLDGLGMKS-FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ +L L G MK YES++ + ++M D N+ G +++ K+R
Sbjct: 142 ITRLADLL-----LQGAVMKRPIQPYESHLQYVPQWMCDYNLFGCAFMKCGKAKFR 192
>gi|367009362|ref|XP_003679182.1| hypothetical protein TDEL_0A06390 [Torulaspora delbrueckii]
gi|359746839|emb|CCE89971.1| hypothetical protein TDEL_0A06390 [Torulaspora delbrueckii]
Length = 1486
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 184/623 (29%), Positives = 302/623 (48%), Gaps = 44/623 (7%)
Query: 413 QNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLS 472
N N + + + Y + L RLL K +I E++R+TG+ + RG K+ S
Sbjct: 851 NNHNLSSAKTVLSYWVDRVELNIRLLQKQEYIPRVTELSRLTGIDFYSVYYRGSQYKIES 910
Query: 473 QLLR--KAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMA 530
L R KA+ +V P+ ++ + V+E + FY+ P+ LDF SLYPSIMMA
Sbjct: 911 ILGRLCKAESFIMVAPSKRRVKQQNALECVPLVMEPESAFYKSPLVVLDFQSLYPSIMMA 970
Query: 531 YNLCYSTLV--TPE--------DARKLNLP-------PECVNKTPSGETFVKSNLQKGIL 573
YN CYST++ PE A ++ LP + V +P+G +VKS ++K L
Sbjct: 971 YNYCYSTMLGRVPELKVGENIIGASQVILPEGLLTLLADNVTISPNGIAYVKSTIRKSTL 1030
Query: 574 PEILEELLAARKRAKADLKEA--KDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPC 630
++LE++L R K + + + + +L+ RQLALK+ AN YG+T A+ G++PC
Sbjct: 1031 AKMLEDILDTRFMVKKTMTDIGRNNAFSRRLLNSRQLALKLIANVTYGYTSASFSGRMPC 1090
Query: 631 IEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMK 690
+++ SV GR+ +E +E + A+V+YGDTDS+ V + E A
Sbjct: 1091 SDLADSVVQTGRETLEKAIDFIE------SNPDWGAKVVYGDTDSLFVYLPGKSREEAFT 1144
Query: 691 LGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVR 749
+G+ A ++ P++L+FEKVY+P LL+SKKRY G + K D + D KGIETVR
Sbjct: 1145 IGKSMALEVTKRNPAPVELKFEKVYHPSLLVSKKRYVGYMYDKNAKQDPIFDAKGIETVR 1204
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD 809
RD + +V + + + +D+ +++ + + + + + +K +
Sbjct: 1205 RDGHRAQQKIVEKSIRILFETQDLSKVKHFIQDEFTKIRLGTVSVQDFCFSKVVRLGAYK 1264
Query: 810 YEVKA-AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IP 867
E A +A+RM K D AP +RVPYV++K G ER P + N+ +
Sbjct: 1265 SEQTAPPGAVVAKRMMKEDHRAAPQYKERVPYVVVKGPAGQLLRERCLSPEEFMANDSLE 1324
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCI 927
+D+ YY+ + PL R+F + N S+ +++ S + S + Q CI
Sbjct: 1325 LDSEYYINKTLVPPLERLFNILGINVSEWAFQLTRHKNLVTSMDAKSIDSNLSSTQ--CI 1382
Query: 928 GCKALI--SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQEC---------QG 976
C+ I S+ LC +C + + + E + T C+ C +
Sbjct: 1383 KCRGEIGKSDSLLCENCLSDRPLTASQLILRTTSNESRLRSISTVCRTCCYRYSNDASEV 1442
Query: 977 SLHQDVLCTSRDCPIFYRRKKAQ 999
S H C S DCP+++ R KA+
Sbjct: 1443 SDHIGDCCNSYDCPVYFGRMKAR 1465
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 41/175 (23%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYI-------SCPQGMGPDDISHFHQILEGRMREAN 171
IIR++G GH V C VHG PY +I P M + H +LE +
Sbjct: 55 IIRVYGHLPSGHQVLCHVHGVFPYIFIPYDGQDSDTPTTMN-QKCAQLHNVLEIK----- 108
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQ-------------KSQPFLKIVVA------LPTM 212
+ MV+K+ I ++Q+ K PF V + +
Sbjct: 109 ---------SQLSMVKKKDIKQFKQKISGLKYIANVSVVKGVPFYGFNVGWSLFYKISVL 159
Query: 213 VASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
A L I+ + K T+ES + F L+F D N+ G +W+++ +R
Sbjct: 160 DAGFTNKLSDLIRDGKMFEKPIETFESQLPFLLQFSADFNLFGCSWVDLEQCYFR 214
>gi|139424541|ref|YP_001129507.1| BALF5 [Human herpesvirus 4 type 2]
gi|123811624|sp|Q1HVC1.1|DPOL_EBVA8 RecName: Full=DNA polymerase catalytic subunit
gi|82704017|gb|ABB89286.1| BALF5 [Human herpesvirus 4]
gi|428161092|gb|AFY97899.1| BALF5 [Human herpesvirus 4]
Length = 1015
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 269/548 (49%), Gaps = 58/548 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+ I L E RRRL +YC++D+ L LL+ + E+A++ +P
Sbjct: 467 KKEDVHYKEIPRLFAAGPEGRRRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCR 526
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L GQ I+V S LL A+++N ++P + S++ Y+GATV++ +GFY P+ +D
Sbjct: 527 RVLDDGQQIRVFSCLLAAAQKENFILP--MPSASDRDGYQGATVIQPLSGFYNSPVLVVD 584
Query: 520 FASLYPSIMMAYNLCYSTLVTP-EDARKLNLPP----ECVNKTPSGETFVKSNLQKGILP 574
FASLYPSI+ A+NLCYST++TP E+ R L P E T FVK ++ + L
Sbjct: 585 FASLYPSIIQAHNLCYSTMITPGEEHRLAGLRPGEDYESFRLTGGVYHFVKKHVHESFLA 644
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
+L LA RK K L +DP ++ +LD +QLA+K + N+VYGFTG G PC+ I+
Sbjct: 645 SLLTSWLAKRKAIKKLLAACEDPRQRTILDKQQLAIKCTCNAVYGFTGVANGLFPCLSIA 704
Query: 635 SSVTSYGRQMIEHTKKLVE--------------DKFTTVGGYEHNAEVIYGDTDSVMVQF 680
+VT GR M+E K VE D + + E VIYGDTDS+ ++
Sbjct: 705 ETVTLQGRTMLERAKAFVEALSPANLQALAPSPDAWAPLNP-EGQLRVIYGDTDSLFIEC 763
Query: 681 -GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
G E AA F+ PI LE EK + +LI+KKRY G+ K
Sbjct: 764 RGFSESETLRFAEALAAHTTRSLFVAPISLEAEKTFSCLMLITKKRYVGVLTDG-----K 818
Query: 740 MDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA----------------------- 776
KG+E VR+ C V+ L +L D + A
Sbjct: 819 TLMKGVELVRKTACKFVQTRCRRVLDLVLADARVKEAASLLSHRPFQESFTQGLPVGFLP 878
Query: 777 -VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNV 834
+ + +DL R+ + L + L++ Y+ + H+ + ++ +R+ P +
Sbjct: 879 VIDILNQAYTDLREGRVPMGELCFSTELSRKLSAYKSTQMPHLAVYQKFVERNEEL-PQI 937
Query: 835 GDRVPYVIIK---AAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILK 891
DR+ YV ++ KGA+ E +EDP Y + +P+ +Y +++ + I + +
Sbjct: 938 HDRIQYVFVEPKGGVKGARKTEMAEDPAYAERHGVPVAVDHYF-DKLLQGAANILQCLFD 996
Query: 892 NASKELLS 899
N S LS
Sbjct: 997 NNSGAALS 1004
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 33/298 (11%)
Query: 119 IIRIFGVTR-EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP 177
+I++ G + +G SVC V G + YFY S PQG+ D+ +L ++ + + + P
Sbjct: 126 VIKLLGRRKADGASVCVNVFGQQAYFYASAPQGL---DVEF--AVLSA-LKASTFDRRTP 179
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
V +E V +RSIM Y + KI ++ P V L D G + F
Sbjct: 180 CRVS-VEKVTRRSIMGYGNHAGD-YHKITLSHPNSVCHVATWLQ-----DKHGCRIF--- 229
Query: 238 ESNVLFALRFMIDCNIVGGNWIE----VPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPE 293
E+NV RF++D + V W +P ++R SY +LE+DC D+ R
Sbjct: 230 EANVDATRRFVLDNDFVTFGWYSCRRAIPRLQHRD-----SYAELEYDCEVGDLSVRR-- 282
Query: 294 GEFSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLVTLQGEKQPFIRNVM-TLK 350
E S ++ L+FDIEC G +G FP T+ D ++Q++ ++ GE+ R ++ TL
Sbjct: 283 -EDSSWPSYQALAFDIECLGEEG-FPTATNEADLILQISCVLWSTGEEAGRYRRILLTLG 340
Query: 351 SCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSI 408
+C I GV+V F +E D+L A+ IR++ +++ GYN+ FD PY++++ +SI
Sbjct: 341 TCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYSI 398
>gi|123845614|sp|Q3KSP1.1|DPOL_EBVG RecName: Full=DNA polymerase catalytic subunit
gi|64173304|gb|AAY41154.1| unknown [Human herpesvirus 4]
Length = 1015
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 269/548 (49%), Gaps = 58/548 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+ I L E RRRL +YC++D+ L LL+ + E+A++ +P
Sbjct: 467 KKEDVHYKEIPRLFAAGPEGRRRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCR 526
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L GQ I+V S LL A+++N ++P + S++ Y+GATV++ +GFY P+ +D
Sbjct: 527 RVLDDGQQIRVFSCLLAAAQKENFILP--MPSASDRDGYQGATVIQPLSGFYNSPVLVVD 584
Query: 520 FASLYPSIMMAYNLCYSTLVTP-EDARKLNLPP----ECVNKTPSGETFVKSNLQKGILP 574
FASLYPSI+ A+NLCYST++TP E+ R L P E T FVK ++ + L
Sbjct: 585 FASLYPSIIQAHNLCYSTMITPGEEHRLAGLRPGEDYESFRLTGGVYHFVKKHVHESFLA 644
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
+L LA RK K L +DP ++ +LD +QLA+K + N+VYGFTG G PC+ I+
Sbjct: 645 SLLTSWLAKRKAIKKLLAACEDPRQRTILDKQQLAIKCTCNAVYGFTGVANGLFPCLSIA 704
Query: 635 SSVTSYGRQMIEHTKKLVE--------------DKFTTVGGYEHNAEVIYGDTDSVMVQF 680
+VT GR M+E K VE D + + E VIYGDTDS+ ++
Sbjct: 705 ETVTLQGRTMLERAKAFVEALSPANLQALAPSPDAWAPLNP-EGQLRVIYGDTDSLFIEC 763
Query: 681 -GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
G E AA F+ PI LE EK + +LI+KKRY G+ K
Sbjct: 764 RGFSESETLRFAEALAAHTTRSLFVAPISLEAEKTFSCLMLITKKRYVGVLTDG-----K 818
Query: 740 MDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA----------------------- 776
KG+E VR+ C V+ L +L D + A
Sbjct: 819 TLMKGVELVRKTACKFVQTRCRRVLDLVLADARVKEAASLLSHRPFQESFTQGLPVGFLP 878
Query: 777 -VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNV 834
+ + +DL R+ + L + L++ Y+ + H+ + ++ +R+ P +
Sbjct: 879 VIDILNQAYTDLREGRVPMGELCFSTELSRKLSAYKSTQMPHLAVYQKFVERNEEL-PQI 937
Query: 835 GDRVPYVIIK---AAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILK 891
DR+ YV ++ KGA+ E +EDP Y + +P+ +Y +++ + I + +
Sbjct: 938 HDRIQYVFVEPKGGVKGARKTEMAEDPAYAERHGVPVAVDHYF-DKLLQGAANILQCLFD 996
Query: 892 NASKELLS 899
N S LS
Sbjct: 997 NNSGAALS 1004
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 33/298 (11%)
Query: 119 IIRIFGVTR-EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP 177
+I++ G + +G SVC V G + YFY S PQG+ D+ +L ++ + + + P
Sbjct: 126 VIKLLGRRKADGASVCVNVFGQQAYFYASAPQGL---DVEF--AVLSA-LKASTFDRRTP 179
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
V +E V +RSIM Y + KI ++ P V L D G + F
Sbjct: 180 CRVS-VEKVTRRSIMGYGNHAGD-YHKITLSHPNSVCHVATWLQ-----DKHGCRIF--- 229
Query: 238 ESNVLFALRFMIDCNIVGGNWIE----VPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPE 293
E+NV RF++D + V W +P ++R SY +LE+DC D+ R
Sbjct: 230 EANVDATRRFVLDNDFVTFGWYSCRRAIPRLQHRD-----SYAELEYDCEVGDLSVRR-- 282
Query: 294 GEFSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLVTLQGEKQPFIRNVM-TLK 350
E S ++ L+FDIEC G +G FP T+ D ++Q++ ++ GE+ R ++ TL
Sbjct: 283 -EDSSWPSYQALAFDIECLGEEG-FPTATNEADLILQISCVLWSTGEEAGRYRRILLTLG 340
Query: 351 SCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSI 408
+C I GV+V F +E D+L A+ IR++ +++ GYN+ FD PY++++ +SI
Sbjct: 341 TCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYSI 398
>gi|302697887|ref|XP_003038622.1| hypothetical protein SCHCODRAFT_80794 [Schizophyllum commune H4-8]
gi|300112319|gb|EFJ03720.1| hypothetical protein SCHCODRAFT_80794 [Schizophyllum commune H4-8]
Length = 1541
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 196/681 (28%), Positives = 314/681 (46%), Gaps = 67/681 (9%)
Query: 367 RDVLLAWRDFIREVDPDVM----IGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRR 422
R VL WR E+ V + +++ + +P +H+ ++ N +
Sbjct: 846 RHVLNIWRLMRTELTLSVYSFENVAFHVLRRRVPAY------NHATLTRWFNSDVPHHTT 899
Query: 423 LAVYCLKDAYLPQ-RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
A++ L + L +L+ + E ARV GV +L+RG KV S + R AK +
Sbjct: 900 QALHYLANRTLMDLEILEGSEVVTKNAEFARVFGVDFYSVLTRGSQFKVESFMFRLAKPE 959
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL- 538
+ V+ P+ G + ++E + FY P+ LDF SLYPS+M+AYN Y T
Sbjct: 960 SYVLLSPSKIDVGKQNAAECMPLIMEPTSAFYSSPLLVLDFQSLYPSVMIAYNYSYDTCL 1019
Query: 539 --VTPEDAR------KLNLPP-------ECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
+TP R LN+P + +N +P+G +VK +++G+L +L ELL
Sbjct: 1020 GRITPFQGRYKFGVTDLNIPKGTYELLQDDINISPNGIAYVKQRIRRGLLGRMLTELLDT 1079
Query: 584 RKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGR 642
R K +K D + +L+ RQL LK +N YG+T AT G++P +EI+ S+ GR
Sbjct: 1080 RVMVKQAMKGVPDKALQRILNARQLGLKYISNVTYGYTSATYSGRMPAVEIADSIVQTGR 1139
Query: 643 QMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT 702
+ +E L+ + A+V+YGDTDSV V T E A ++G + AD I+
Sbjct: 1140 ETLEKAIDLINSH------PKWGAQVVYGDTDSVFVYLIGKTKEQAFRIGYDMADTITAL 1193
Query: 703 FIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVT 761
KPIKL+FEKVY P +L++KKRY G Y + D KGIETVRRD + +
Sbjct: 1194 NPKPIKLKFEKVYLPCVLLAKKRYVGFKYECVDDAEPGFDAKGIETVRRDGVPAQQKMTE 1253
Query: 762 ECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL-TKTGDDYEVKAAHVELA 820
CL + +D+ Y + + L+ NR + V K + T D V +A
Sbjct: 1254 NCLKILFRTQDLSQVKDYCLRSWTKLMENRASVQDFVFAKEVRMGTYSDKGPPPPGVTVA 1313
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYYLENQIS 879
R + D P +RV YVI + G++ ER+ DP+ L N+ + +D YY+ +
Sbjct: 1314 ARKQAADPNAEPQYAERVRYVIARGLPGSRLVERAFDPLEFLNNSQLRLDAVYYITRVLM 1373
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQ---------------- 923
PL RIF + + + + + + P+ K++ R+
Sbjct: 1374 PPLERIFNLVGADIQQW-----YDQMPKVKDPTQGSPRKWSPRKGEQPTMGLLDTLVNIE 1428
Query: 924 -----LSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSL 978
SC+ C L +G +C C+ ++ ++ E+ ++ T C C +
Sbjct: 1429 EHFQDYSCLRCGELAYDG-VCDDCRTVPQTTAADLLTTIRTHELRSMQIQTICASCSKTP 1487
Query: 979 H-QDVLCTSRDCPIFYRRKKA 998
+ + C S DCP Y RK+A
Sbjct: 1488 QAESIACESLDCPWMYARKRA 1508
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 83/201 (41%), Gaps = 33/201 (16%)
Query: 117 AAIIRIFGVTR-EGHSVCCKVHGFEPYFYISCPQGMGPDDISHF---------HQILEGR 166
A IIRI+G + G C VH PYF+I + P + + H I
Sbjct: 44 APIIRIYGASSITGRKACVHVHQVYPYFFIEYKGDLDPKCVKQYIAKLTHSLDHAIAVSL 103
Query: 167 MREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQL 226
R+ N Q+VR I +V+ Y S PFLK+++ P +V IL Q
Sbjct: 104 KRDPASNKA--QYVRAIVLVKGIHFYGYHSTYS-PFLKVLMIDPNIVRRAVTIL----QS 156
Query: 227 DGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP-----------VGKYRKTAKTLSY 275
+ F YES++ + L+F+ D + G W+++ + T K SY
Sbjct: 157 PSIMSTQFRVYESHLSYYLQFLSDFGLYGCGWMDMAEVFERGKEGDELALTAPTFKPSSY 216
Query: 276 CQ-----LEFDCLYSDIISRH 291
+ LE D + I++RH
Sbjct: 217 FRQSRMALEVDVVAHQILNRH 237
>gi|225558751|gb|EEH07035.1| polymerase zeta subunit [Ajellomyces capsulatus G186AR]
Length = 1628
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 189/613 (30%), Positives = 302/613 (49%), Gaps = 49/613 (7%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L ++++ I E AR+ G+ + SRG KV S + R AK +N ++
Sbjct: 994 YFLSRVQLDLKIIESNELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPENFIL 1053
Query: 486 --PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P KQ G + V+E ++ FY P+ LDF SLYPSIM+AYN CYST +V
Sbjct: 1054 ISPGKKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGRVV 1113
Query: 540 TPEDARKLN------------LPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ KL L + +N P+G + K ++K +L ++L E+L R
Sbjct: 1114 SWRGQNKLGFIDFRRPAGLLELLKDQINIAPNGIIYAKQEVRKSLLAKMLIEILETRVMV 1173
Query: 588 KADLKEAKD-PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K +K AKD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +
Sbjct: 1174 KGGMKAAKDDKYLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETL 1233
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E L+ +V + AEV+YGDTDS+ V T + A +G E A ++ + +
Sbjct: 1234 EKAIVLIH----SVERW--GAEVVYGDTDSIFVYLKGRTRDEAFDIGEEIARAVTDSNPR 1287
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + +K D KGIETVRRD + + + L
Sbjct: 1288 PVKLKFEKVYHPCVLLAKKRYVGYKYESRLQKEPDFDAKGIETVRRDGTPAEQKIEEKAL 1347
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERM 823
+ D+ Y + + ++ ++ + K + T + + ++ +
Sbjct: 1348 KILFETADLSRVKSYFQKQCAKIMQGKVSIQDFCFAKEVRLGTYSERGIPPPGALISAKR 1407
Query: 824 RKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYYLENQISKPL 882
D T G+RVPYV+I A GA+ +R P +L ++ + +D YY+ + PL
Sbjct: 1408 MLEDPRTEVQYGERVPYVVISGAPGARLIDRCVAPEVLLHDSQLELDAEYYISKNLIPPL 1467
Query: 883 LRIFEPILKNASK---ELLSGDHTRSI---SISTPSNSGIMKFAKRQL-------SCIGC 929
RIF + N + E+ R I + + P+N + AK+ L SC+ C
Sbjct: 1468 ERIFNLVGANVRQWYDEMPKYQRVRRIEGGASNVPANKEGLFSAKKTLESYMKLSSCVVC 1527
Query: 930 KALISNG--TLCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLC 984
+ + G +C+ C + L K+ +E + F L C+ C G S ++V C
Sbjct: 1528 REKLEEGEEQICTGCLRDSHVSLLQLKSRLMKEERKEFF--LHKICRSCMGVSWGEEVKC 1585
Query: 985 TSRDCPIFYRRKK 997
S+DCP+FY R +
Sbjct: 1586 DSKDCPVFYTRTR 1598
>gi|78127846|gb|ABB22230.1| DNA polymerase-like protein [Ovine herpesvirus 2]
Length = 998
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 283/536 (52%), Gaps = 54/536 (10%)
Query: 401 KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISF 460
K DV + I L G++ R +L +YC++DA L LL M E+A++ +P
Sbjct: 457 KTDVTYKDIPILFRGSSHDRAKLGLYCVQDAVLVLNLLQHFMTHIEITEIAKIANIPPRR 516
Query: 461 LLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDF 520
+++ GQ I+V + LL A+++ ++P + G+ G Y+GATV+ +GFY P+ +DF
Sbjct: 517 VITDGQQIRVFACLLAAAQEQGYILP-MPTTGATSG-YQGATVINPISGFYNTPVLVVDF 574
Query: 521 ASLYPSIMMAYNLCYSTLVTPEDARKL-NLPP---ECVNKTPSGETFVKSNLQKGILPEI 576
ASLYPSI+ A+NLCYST++ E+ +L P E + FVK + + +L +
Sbjct: 575 ASLYPSIIQAHNLCYSTIIPHENLSNFPDLTPNDYETFFISSGPVHFVKKHKSESLLASL 634
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
L+ LA RK + +L++ +D +A+LD +QLA+K++ NSVYGFTG G LPC+ I+ +
Sbjct: 635 LKTWLAKRKAIRKELEQCQDEKLRAILDKQQLAIKVTCNSVYGFTGVASGMLPCLMIAET 694
Query: 637 VTSYGRQMIEHTKKLVED-------KFTTVGGYEHNAE-------VIYGDTDSVMVQFGV 682
VT GR M+E TK+ VE+ + + +A+ V+YGDTDS+ +
Sbjct: 695 VTLQGRTMLEKTKQFVENLDVQSLQQICPTQTLKIHAQHPTPRFTVVYGDTDSLFINCEG 754
Query: 683 PTVEAAMKLGREAADYISG-TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
++ ++ A + S F PIKLE EKV+ LL++KKRY G+ N K+
Sbjct: 755 FDMDTVLEFSDRLASHTSSLLFSAPIKLESEKVFQCLLLLTKKRYVGILSNN-----KIL 809
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQ----------------------- 778
KG++ VR+ C V+++ L IL D ++ A Q
Sbjct: 810 MKGVDLVRKTACTYVQDVTRSVLELILRDSNVKAAAQTLSQQPVASCYKHGLPIGFLAVI 869
Query: 779 -YVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEV-KAAHVELAERMRKRDAATAPNVGD 836
+ + SDL NR+ L+ L + +K +Y+ H+ + +++ +R+ P V D
Sbjct: 870 DILNQSYSDLKNNRVPLARLTYSTEFSKPFSEYKTSNLPHLAVYKKLAERNEEL-PQVHD 928
Query: 837 RVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKN 892
R+ YV ++A+ G+ + +EDP Y +N +P+ + +Y + I + + I + + KN
Sbjct: 929 RISYVFVEAS-GSLVSDMAEDPNYAEQNKLPVASDWYFDKVI-RGVANILQCLFKN 982
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 170/359 (47%), Gaps = 47/359 (13%)
Query: 49 LLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVS-QCQSI-MFQQLDIDYVIGDSN 106
+LP ++ SL + D++ R L + + Y S +C SI + Q DI
Sbjct: 65 ILPGNKPSLWVNDVKLRGPDGEDLTFHVYDIVEATYSSDKCDSIPLHLQADI-------- 116
Query: 107 RELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGR 166
+P S ++++FG T +G SVC V G YFY+ D ++ + ++
Sbjct: 117 ---VP----SGIVLKLFGRTEDGRSVCVNVFGQRVYFYVH------HDSYANLQRDVQHV 163
Query: 167 MREA-NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQ 225
++E+ +R++ V HI V K+ + Y S+ + + P M G+ + G Q
Sbjct: 164 LQESGHRSAGV-----HIATVHKKFLNGYSTSSSEVRQITLWSSPAMRNLANGLSNMGYQ 218
Query: 226 LDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYS 285
+ +E+NV + RF+ID W R + S+ QLE+DC
Sbjct: 219 V----------FEANVDASTRFIIDNQFSTFGWYTCSNFSARASDHRDSHTQLEYDCAVG 268
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLV-TLQGEKQPF 342
D+ ++ + ILSFDIEC G G FP D +IQ++ + T+ E P
Sbjct: 269 DVRFDPHRLDWPH---YNILSFDIECLGECG-FPTADRDEDIIIQISCAIWTVGCESGPK 324
Query: 343 IRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ ++ + +CAP+ G+DV F +E D+L A+ IR+ +++ GYNIC FD PY++++
Sbjct: 325 LI-LLCVGTCAPLDGIDVYEFPSEMDLLYAFFTLIRDYGVEIITGYNICNFDFPYVLDR 382
>gi|428161174|gb|AFY97980.1| BALF5 [Human herpesvirus 4]
Length = 1015
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 269/548 (49%), Gaps = 58/548 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+ I L E RRRL +YC++D+ L LL+ + E+A++ +P
Sbjct: 467 KKEDVHYKEIPRLFAAGPEGRRRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCR 526
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L GQ I+V S LL A+++N ++P + S++ Y+GATV++ +GFY P+ +D
Sbjct: 527 RVLDDGQQIRVFSCLLAAAQKENFILP--MPSASDRDGYQGATVIQPLSGFYNSPVLVVD 584
Query: 520 FASLYPSIMMAYNLCYSTLVTP-EDARKLNLPP----ECVNKTPSGETFVKSNLQKGILP 574
FASLYPSI+ A+NLCYST++TP E+ R L P E T FVK ++ + L
Sbjct: 585 FASLYPSIIQAHNLCYSTMITPGEEHRLAGLRPGEDYESFRLTGGVYHFVKKHVHESFLA 644
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
+L LA RK K L +DP ++ +LD +QLA+K + N+VYGFTG G PC+ I+
Sbjct: 645 SLLTSWLAKRKAIKKLLAACEDPRQRTILDKQQLAIKCTCNAVYGFTGVANGLFPCLSIA 704
Query: 635 SSVTSYGRQMIEHTKKLVE--------------DKFTTVGGYEHNAEVIYGDTDSVMVQF 680
+VT GR M+E K VE D + + E VIYGDTDS+ ++
Sbjct: 705 ETVTLQGRTMLERAKAFVEALSPANLQALAPSPDAWAPLNP-EGQLRVIYGDTDSLFIEC 763
Query: 681 -GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
G E AA F+ PI LE EK + +LI+KKRY G+ K
Sbjct: 764 RGFSESETLRFAEALAAHTTRSLFVAPISLEAEKTFSCLMLITKKRYVGVLTDG-----K 818
Query: 740 MDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA----------------------- 776
KG+E VR+ C V+ L +L D + A
Sbjct: 819 TLMKGVELVRKTACKFVQTRCRRVLDLVLADARVKEAASLLSHRPFQESFTQGLPVGFLP 878
Query: 777 -VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNV 834
+ + +DL R+ + L + L++ Y+ + H+ + ++ +R+ P +
Sbjct: 879 VIDILNQAYADLREGRVPMGELCFSTELSRKLSAYKSTQMPHLAVYQKFVERNEEL-PQI 937
Query: 835 GDRVPYVIIK---AAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILK 891
DR+ YV ++ KGA+ E +EDP Y + +P+ +Y +++ + I + +
Sbjct: 938 HDRIQYVFVEPKGGVKGARKTEMAEDPAYAERHGVPVAVDHYF-DKLLQGAANILQCLFD 996
Query: 892 NASKELLS 899
N S LS
Sbjct: 997 NNSGAALS 1004
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 33/298 (11%)
Query: 119 IIRIFGVTR-EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP 177
+I++ G + +G SVC V G + YFY S PQG+ D+ +L ++ + + + P
Sbjct: 126 VIKLLGRRKADGASVCVNVFGQQAYFYASAPQGL---DVEF--AVLSA-LKASTFDRRTP 179
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
V +E V +RSIM Y + KI ++ P V L D G + F
Sbjct: 180 CRVS-VEKVTRRSIMGYGNHAGD-YHKITLSHPNSVCHVATWLQ-----DKHGCRIF--- 229
Query: 238 ESNVLFALRFMIDCNIVGGNWIE----VPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPE 293
E+NV RF++D + V W +P ++R SY +LE+DC D+ R
Sbjct: 230 EANVDATRRFVLDNDFVTFGWYSCRRAIPRLQHRD-----SYAELEYDCEVGDLSVRR-- 282
Query: 294 GEFSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLVTLQGEKQPFIRNVM-TLK 350
E S ++ L+FDIEC G +G FP T+ D ++Q++ ++ GE+ R ++ TL
Sbjct: 283 -EDSSWPSYQALAFDIECLGEEG-FPTATNEADLILQISCVLWSTGEEAGRYRRILLTLG 340
Query: 351 SCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSI 408
+C I GV+V F +E D+L A+ IR++ +++ GYN+ FD PY++++ +SI
Sbjct: 341 TCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYSI 398
>gi|336371041|gb|EGN99381.1| hypothetical protein SERLA73DRAFT_90742 [Serpula lacrymans var.
lacrymans S7.3]
Length = 791
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 182/598 (30%), Positives = 286/598 (47%), Gaps = 43/598 (7%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
+LD+ + E ARV GV ++SRG KV S + R AK ++ V+ P+ + G +
Sbjct: 169 ILDEAETVTKNAEFARVFGVDFFSVISRGSQFKVESFMFRIAKPESFVLLSPSKEDVGKQ 228
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---------TPEDAR 545
++E + FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 229 NAAECMPLIMEPLSAFYNGPLVVLDFQSLYPSIMIAYNYCYSTCLGRVGEFQGQNKFGVT 288
Query: 546 KLNLPPECVNK-------TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK-DP 597
+L+ P + K P+G +VKS+++KG+L +L ELL R K +K A+ +
Sbjct: 289 ELHHPAGLLQKLQDHITVAPNGIMYVKSDVRKGLLGRMLTELLETRVMVKQAMKSARGNK 348
Query: 598 LEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKF 656
+LD RQL+LK AN YG+T AT G++P +EI+ S+ GR+ +E +++
Sbjct: 349 ALGRILDARQLSLKYIANVTYGYTSATYSGRMPAVEIADSIVQSGRETLEKAVRIIN--- 405
Query: 657 TTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYY 716
+ +V+YGDTDS+ + T E A ++G++ AD I+ P+KL+FEKVY
Sbjct: 406 ---ATKKWGGKVVYGDTDSLFIYLPGKTKEQAFRIGQDMADTITAMNPAPVKLKFEKVYL 462
Query: 717 PYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPG 775
P +L++KKRY G + NP + D KGIETVRRD + + CL + +++
Sbjct: 463 PCVLMAKKRYVGFKYENPDDSVPVFDAKGIETVRRDGVAAQQKMTETCLKILFRTQNLSE 522
Query: 776 AVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAPNV 834
Y + +L N++ + V K + T D +A R +D P
Sbjct: 523 VKDYCTRSWLKILRNKVSIQDFVFAKEVKLGTYSDKVPPPPGATVAARRIMQDENDEPQY 582
Query: 835 GDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNA 893
G+RVPYVI+K ++ +R+ P L N + +D YY+ + PL RIF + +
Sbjct: 583 GERVPYVIVKGEPQSRLVDRAVSPEECLRNRRLSLDGAYYISRVLIPPLERIFNLVGADV 642
Query: 894 SK------ELLSGDHTRSISISTPSNSG--IMKFAK----RQLSCIGCKALISNGTLCSH 941
+ + D +S+S N G KF + C+ C AL G +C
Sbjct: 643 RAWYDEMPKTMKVDQVDPLSLSPRKNKGNTTNKFKIDEHFQSSQCLHCGALAQEG-ICDA 701
Query: 942 CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD-VLCTSRDCPIFYRRKKA 998
C+ + + ++ + E C C S + + C + DCP F+ R KA
Sbjct: 702 CRRDPQTVIPALLGRIYKAESRMLNTQQICVSCTASAAAEPIRCENYDCPWFFERTKA 759
>gi|363749421|ref|XP_003644928.1| hypothetical protein Ecym_2378 [Eremothecium cymbalariae DBVPG#7215]
gi|356888561|gb|AET38111.1| Hypothetical protein Ecym_2378 [Eremothecium cymbalariae DBVPG#7215]
Length = 1469
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 183/627 (29%), Positives = 312/627 (49%), Gaps = 61/627 (9%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPN-VKQAGSE 494
RL++ I E AR+ G+ ++SRG KV S L R K + ++ + K A +
Sbjct: 854 RLVEVQQIISKTFEEARLIGIDFYSVMSRGSQFKVESFLARICKSEYFILLSPSKSALKK 913
Query: 495 QGTYEGA-TVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV------TPEDAR-- 545
Q E ++E ++ FY+ P+ LDF SLYPS+MMAYN CYST++ T ++
Sbjct: 914 QKALECVPLIMEPQSSFYKSPLLVLDFQSLYPSVMMAYNYCYSTVIGRVRELTNKNNEIG 973
Query: 546 --KLNLPP-------ECVNKTPSGETFVKSNLQKGILPEILEELLAAR----KRAKADLK 592
K+N+P E + +P+G F++ N++K +L ++L+++L+ R + KA K
Sbjct: 974 ITKINIPANILHLMDEHITISPNGVLFLRENIRKSVLSKMLKDILSTRILIKETMKALPK 1033
Query: 593 EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKL 651
E + L L+ RQLALK AN +YG+T A+ G++PC +I+ S+ GR+ + ++
Sbjct: 1034 EERSLLNS--LNNRQLALKFLANVIYGYTSASYSGRMPCSDIADSIVQTGRETLRKAIEM 1091
Query: 652 VEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEF 711
+E + Y A+V+YGDTDS+ V ++E A ++G A ++ P+KL+F
Sbjct: 1092 IESE------YAWGAKVVYGDTDSLFVYLPGKSLEQAFEIGNSIARAVTAANPSPVKLQF 1145
Query: 712 EKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
EKVY+P +L+SKKRY G + + +K K D KGIET+RRD C + +V + L + ++
Sbjct: 1146 EKVYHPCILVSKKRYVGYSYQDLSQKVPKFDAKGIETIRRDGCPAQQKIVQKSLEILFLE 1205
Query: 771 RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL-TKTGDDYEVKAAHVELAERMRKRDAA 829
+D+ YV + + + + + + T + V +AE +D
Sbjct: 1206 KDLSKVKSYVMDQFRKITLGNVSIQDFCFAREVRIGTYKNEYVLPPAARVAEDNMLKDIM 1265
Query: 830 TAPNVGDRVPYVIIKAAKGAKAYERSEDPI-YVLENNIPIDTHYYLENQISKPLLRIFEP 888
P +RV YV++K +G + +R P ++ N+ +D YY+ + PL R F
Sbjct: 1266 AKPEYRERVSYVVVKGKQGERLLDRCISPDEFMASPNLELDADYYITKTLLPPLERFFNL 1325
Query: 889 I---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SNGTLCSHC 942
+ ++ +EL + R ++ SN+ + + K +C+ C+ + S LC C
Sbjct: 1326 VSMDIRQCYREL--PRYLRFNPVTGISNNSLQRSMKVS-TCLNCRNRVLFNSKIKLCEEC 1382
Query: 943 KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGS---LHQDV------LCTSRDCPIFY 993
+++ + + +E F + C+ C S L D C S DCPI+Y
Sbjct: 1383 IRNPSKIVGNLLYENLSIESKFRSIVAACKVCSDSMTKLANDTTKKAIRTCESLDCPIYY 1442
Query: 994 RRKKAQK--------DMAEAKLQLDRW 1012
R K+Q+ D+ +LD W
Sbjct: 1443 SRNKSQRLLTGSLWNDIHRTLKRLDSW 1469
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 28/190 (14%)
Query: 98 IDYVIGDS--NRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGP-- 153
+D G+S NR+ L A IIR++G G++V C +HG PY ++
Sbjct: 27 LDRQCGNSLPNRKFL-----EAPIIRLYGSLPGGYTVLCHLHGVFPYIFVRFDSNQDNSI 81
Query: 154 ----DDISHFHQILEGRMREAN---------RNSKVPQFVRHIEMVQ-KRSIMYYQQQKS 199
+D H +LE +R+AN R+ + Q +R++ V + I +Y
Sbjct: 82 NVPINDCQELHILLELALRKANNTQPNGAPERSEETIQDLRYVANVSLVKGIPFYGFHVG 141
Query: 200 -QPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNW 258
F KI + P V + +L +G+ D K YES++ + L+ D N+ G +W
Sbjct: 142 WSAFYKISLLNPNYVVTLSDMLRQGLLFD----KKLEVYESHIPYLLQMSTDYNLFGCSW 197
Query: 259 IEVPVGKYRK 268
+++ +RK
Sbjct: 198 LKLSKCYFRK 207
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 21/125 (16%)
Query: 305 LSFDIECAGRKGHFPEPTHDPV-----------------IQVANLVTLQGEKQPFIRNVM 347
LS ++ R P P DPV + ++ E + +++
Sbjct: 635 LSLELHILTRNSKLPNPELDPVKIIFWSMNGCSAQRLSSVSKEGIMIFMDENEKRFESLI 694
Query: 348 TLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS 407
L++C VDV FE+E +L A+ D + +DPD++ GY + K YL+ + + +
Sbjct: 695 -LQACG---NVDVAVFESEELLLQAFSDLVLIIDPDILSGYEVNKLSWGYLLARANFAYD 750
Query: 408 IISDL 412
I D+
Sbjct: 751 IPMDI 755
>gi|386368289|gb|AFJ06900.1| BALF5 [Human herpesvirus 4]
Length = 1015
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 269/548 (49%), Gaps = 58/548 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+ I L E RRRL +YC++D+ L LL+ + E+A++ +P
Sbjct: 467 KKEDVHYKEIPRLFAAGPEGRRRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCR 526
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L GQ I+V S LL A+++N ++P + S++ Y+GATV++ +GFY P+ +D
Sbjct: 527 RVLDDGQQIRVFSCLLAAAQKENFILP--MPSASDRDGYQGATVIQPLSGFYNSPVLVVD 584
Query: 520 FASLYPSIMMAYNLCYSTLVTP-EDARKLNLPP----ECVNKTPSGETFVKSNLQKGILP 574
FASLYPSI+ A+NLCYST++TP E+ R L P E T FVK ++ + L
Sbjct: 585 FASLYPSIIQAHNLCYSTMITPGEEHRLAGLRPGEDYESFRLTGGVYHFVKKHVHESFLA 644
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
+L LA RK K L +DP ++ +LD +QLA+K + N+VYGFTG G PC+ I+
Sbjct: 645 SLLTSWLAKRKAIKKLLAACEDPRQRTILDKQQLAIKCTCNAVYGFTGVANGLXPCLSIA 704
Query: 635 SSVTSYGRQMIEHTKKLVE--------------DKFTTVGGYEHNAEVIYGDTDSVMVQF 680
+VT GR M+E K VE D + + E VIYGDTDS+ ++
Sbjct: 705 ETVTLQGRTMLERAKAFVEALSPANLQALAPSPDAWAPLNP-EGQLRVIYGDTDSLFIEC 763
Query: 681 -GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
G E AA F+ PI LE EK + +LI+KKRY G+ K
Sbjct: 764 RGFSESETLRFAEALAAHTTRSLFVAPISLEAEKTFSCLMLITKKRYVGVLTDG-----K 818
Query: 740 MDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA----------------------- 776
KG+E VR+ C V+ L +L D + A
Sbjct: 819 TLMKGVELVRKTACKFVQTRCRRVLDLVLADARVKEAASLLSHRPFQESFTQGLPVGFLP 878
Query: 777 -VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNV 834
+ + +DL R+ + L + L++ Y+ + H+ + ++ +R+ P +
Sbjct: 879 VIDILNQAYTDLREGRVPMGELCFSTELSRKLSAYKSTQMPHLAVYQKFVERNEEL-PQI 937
Query: 835 GDRVPYVIIK---AAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILK 891
DR+ YV ++ KGA+ E +EDP Y + +P+ +Y +++ + I + +
Sbjct: 938 HDRIQYVFVEPKGGVKGARKTEMAEDPAYAERHGVPVAVDHYF-DKLLQGAANILQCLFD 996
Query: 892 NASKELLS 899
N S LS
Sbjct: 997 NNSGAALS 1004
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 33/298 (11%)
Query: 119 IIRIFGVTR-EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP 177
+I++ G + +G SVC V G + YFY S PQG+ D+ +L ++ + + + P
Sbjct: 126 VIKLLGRRKADGASVCVNVFGQQAYFYASAPQGL---DVEF--AVLSA-LKASTFDRRTP 179
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
V +E V +RSIM Y + KI ++ P V L D G + F
Sbjct: 180 CRVS-VEKVTRRSIMGYGNHAGD-YHKITLSHPNSVCHVATWLQ-----DKHGCQIF--- 229
Query: 238 ESNVLFALRFMIDCNIVGGNWIE----VPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPE 293
E+NV RF++D + V W +P ++R SY +LE+DC D+ R
Sbjct: 230 EANVDATRRFVLDNDFVTFGWYSCRRAIPRLQHRD-----SYAELEYDCEVGDLSVRR-- 282
Query: 294 GEFSKMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLVTLQGEKQPFIRNVM-TLK 350
E S ++ L+FDIEC G +G FP T+ D ++Q++ ++ GE+ R ++ TL
Sbjct: 283 -EDSSWPSYQALAFDIECLGEEG-FPTATNEADLILQISCVLWSTGEEAGRYRRILLTLG 340
Query: 351 SCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSI 408
+C I GV+V F +E D+L A+ IR++ +++ GYN+ FD PY++++ +SI
Sbjct: 341 TCEDIEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYSI 398
>gi|307187392|gb|EFN72515.1| DNA polymerase zeta catalytic subunit [Camponotus floridanus]
Length = 2051
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 197/602 (32%), Positives = 294/602 (48%), Gaps = 44/602 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGS 493
+LL+ L I E AR+ G+ + SRG +V S +LR AK N + P++ Q
Sbjct: 1435 KLLNHLDIIGRTCEHARLFGIQFYEVFSRGSQFRVESMMLRLAKPMNYIPISPSIHQRAK 1494
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPED---------- 543
+ ++E + FY P+ LDF SLYPS+++AYN C+ST + +
Sbjct: 1495 MRAPECLPLIMEPESEFYTDPLIVLDFQSLYPSMIIAYNYCFSTCLGRIEHIGQYGPFEF 1554
Query: 544 -ARKLNLPPECV-------NKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLK--E 593
A L + V N +P G FVK +++GILP +L E+L R K +K
Sbjct: 1555 GAATLRIRKNTVLKLQDKINFSPCGVAFVKKEVRQGILPRMLSEILNTRLMVKESMKLHP 1614
Query: 594 AKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLV 652
A++ VL +QL LK+ AN YG+T A G++PCIEI SV S GR+ +E KLV
Sbjct: 1615 AENHTLHRVLHSQQLGLKLIANVTYGYTSANFSGRMPCIEIGDSVVSKGRETLERAIKLV 1674
Query: 653 EDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFE 712
E T G A V+YGDTDS+ V + E A +G E AD ++ P+KL+FE
Sbjct: 1675 ES--TPKWG----ARVVYGDTDSLFVLLPGKSREEAFTIGEEIADAVTAINPPPVKLKFE 1728
Query: 713 KVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD- 770
KV YP +L +KKRY G +Y T ++ + KGIETVRRD C V ++ + L KIL D
Sbjct: 1729 KVLYPSILQTKKRYCGYMYETRNQEKPEFLAKGIETVRRDGCPAVSKILEKAL-KILFDT 1787
Query: 771 RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDA 828
+DI QYV + R+ + L K + Y+ A +EL R+ ++D
Sbjct: 1788 KDISLIKQYVTRQFDKIFQQRVSIQDLTFAKEF-RGIRGYKASACVPALELTRRLIRKDP 1846
Query: 829 ATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPI-DTHYYLENQISKPLLRIFE 887
P V +RV Y+II A P+ V+ + I ++ YY+ I PL R F
Sbjct: 1847 RAVPRVSERVRYIIIAGAPNQPLIHCVRTPMEVITDPTLIPNSVYYITKVIIPPLNRCFN 1906
Query: 888 PILKNASKELLSGDHTRSISI-----STPSNSGIMKFAKRQLSCIGCKALISNGTLCSHC 942
+ ++ H S + S S I +F ++CI C +N +C C
Sbjct: 1907 LFGIDVNRWYKEISHRTSFNNMACLREDNSKSTIRQFFS-SMTCITCGEQ-TNKEVCPDC 1964
Query: 943 KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDM 1002
+ + + +++++E ++ C C G + DV C S DCPI YR A+K++
Sbjct: 1965 FSQPSRTILILLQKIRQIERNQQQITAICHSCTGRI-GDVECLSLDCPILYRMAGARKEV 2023
Query: 1003 AE 1004
A+
Sbjct: 2024 AQ 2025
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 96/228 (42%), Gaps = 36/228 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN-SKVP 177
IIRIFG T G C +HG PY Y+ C D S+ +Q+ N++
Sbjct: 37 IIRIFGSTVTGKKTCLHIHGVFPYMYVPCTIQENTD--SYAYQLAASIDSALNKSFGSTL 94
Query: 178 QFVRHIEMVQKRSIM--YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
+H+ +Q+ S + Y +K F KI P ++ +L G L+ ++
Sbjct: 95 STNQHVYKIQRVSGIPFYGYHEKEHLFFKIYFYNPAIIKRTADLLQNGAILN----QTLQ 150
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYR-------------KTAKTL--------- 273
YE+++ + L+FMID N+ G N I + KYR K++ L
Sbjct: 151 PYEAHIPYILQFMIDYNLYGMNLINLNNIKYRCSLQECTTEDSQNKSSMDLINPQMYLPT 210
Query: 274 -----SYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKG 316
S C+LE D SDI+++ E ++ P +D E A R
Sbjct: 211 SVMRQSMCELEVDAHASDILNKQNVNEKLELNPGLAAIWDEEKARRAA 258
>gi|340727622|ref|XP_003402139.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Bombus
terrestris]
Length = 1635
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 196/607 (32%), Positives = 298/607 (49%), Gaps = 54/607 (8%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
R+L L I E AR+ G+ + SRG +V S +LR AK N V P+++Q
Sbjct: 1034 RILIHLDIIGRTCEHARLFGIQFYEVFSRGSQFRVESMMLRLAKPLNYISVSPSIQQRAR 1093
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPED---------- 543
+ ++E ++ Y P+ LDF SLYPSI++AYN C+ST + +
Sbjct: 1094 MRAPESLPLIMEPQSTLYTDPLIVLDFQSLYPSIIIAYNYCFSTCLGRVEHIGHYEPYEF 1153
Query: 544 -ARKLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLK--- 592
A L + + +N P G FVK ++ GILP +L E+L R K +K
Sbjct: 1154 GATTLKIKKDTAKKLFGKINFAPCGVAFVKPEIRMGILPRMLTEILNTRLMVKKSMKLHG 1213
Query: 593 EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKL 651
L++ +L +QL LK+ AN YG+T A G++PCIEI SV S GR+ +E K+
Sbjct: 1214 NENHALQR-ILHSQQLGLKLIANVTYGYTAANFSGRMPCIEIGDSVVSKGRETLERAIKI 1272
Query: 652 VEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEF 711
VE T G AEV+YGDTDS+ + + E A +G E AD ++ P+KL+F
Sbjct: 1273 VES--TPKWG----AEVVYGDTDSLFILLRRKSREEAFAIGAEIADTVTAANPPPVKLKF 1326
Query: 712 EKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
EKV P +L +KKRY G + +PE+ + + KGIETVRRD C V ++ + L KIL D
Sbjct: 1327 EKVLQPSILQTKKRYCGYMYESPEQKEPEYLAKGIETVRRDGCPAVTKILEKTL-KILFD 1385
Query: 771 -RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRD 827
+D+ QYV +L R+ + L K + + Y++ A +EL R+ ++D
Sbjct: 1386 TKDLSLVKQYVTRQFDKILRKRISIQDLTFAKEF-RGLNGYKISACVPALELTRRLMRKD 1444
Query: 828 AATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL--ENNIPIDTHYYLENQISKPLLRI 885
P +G+RV Y+I+ A + P V+ E+ IP ++ YY+ I PL R
Sbjct: 1445 PRAIPRIGERVRYIIVAGAPNQPLIQCVRTPTEVILDESLIP-NSIYYITKVIIPPLNRC 1503
Query: 886 FEPILKNASKELLSGDHTRSISISTPSN-----SGIMKFAKRQLSCIGCKALISNGT--- 937
+ +A+ +T I TP + K RQ A+ N T
Sbjct: 1504 LNLVGVDANTW-----YTEMIHRQTPDKIINLCANNQKLTIRQFFSTVICAVCENQTQKD 1558
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK 997
+C +C + ++ +++ LE + L CQ C G L D C S DCP+ YR +
Sbjct: 1559 ICMNCMSKPSQTITILYEKLRWLERTYHELNMICQSCTGYL-DDPKCESLDCPVLYRLMQ 1617
Query: 998 AQKDMAE 1004
A++D+ +
Sbjct: 1618 ARRDLVQ 1624
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS--KV 176
+IRIFG T G C +HG PY YI C ++++ + L + A S
Sbjct: 37 VIRIFGSTPSGTKTCLHIHGVFPYMYIPCTIN---NNVNSYMYKLAAAIDSAINVSLGSA 93
Query: 177 PQFVRHIEMVQKRSIM--YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
+H+ +Q+ S + Y +K FLKI P M+ +L G+ L +S
Sbjct: 94 ISNTQHVYKIQQVSGIPFYGYHEKEHLFLKIYFYNPAMIKRAADLLQNGVILG----QSL 149
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT 272
+E+++ F L+FMID N+ G + I + K+R+ T
Sbjct: 150 QPHEAHIPFILQFMIDYNLYGMSLINLKDVKFRQCIHT 187
>gi|322510829|gb|ADX06143.1| putative B family DNA polymerase [Organic Lake phycodnavirus 1]
Length = 1208
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/561 (29%), Positives = 288/561 (51%), Gaps = 71/561 (12%)
Query: 399 IEKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPI 458
+ K+DV I ++ R +A YC++D L ++ K+ + + EM+++ VPI
Sbjct: 560 LSKDDVSPKDIFEMTKKGPHDRGIIAKYCIQDCNLVHQIFQKVDVLTTFSEMSKLCSVPI 619
Query: 459 SFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFY-EKPIAT 517
FL+ RGQ IK+ S + +K ++K+ ++P + + G++ YEGA VLE + G Y P+A
Sbjct: 620 QFLVLRGQGIKLTSYISKKCREKDTLMPLISK-GNDVDAYEGAIVLEPKCGLYLNNPVAC 678
Query: 518 LDFASLYPSIMMAYNLCYSTLV------------TPEDARKL--------------NLPP 551
+D++SLYPS +++ N+ + + V E R+ NLP
Sbjct: 679 VDYSSLYPSSIISENISHDSKVWTKEFDLNDHIKKDEKGREKMTGIKDEHSNFIYDNLPE 738
Query: 552 -----------ECVNKTPSGETFVK------------SNLQKGILPEILEELLAARKRAK 588
E V TP+ + + +K ILP IL+ELLAARK K
Sbjct: 739 YEYVDIQYDTFEYVRNTPTSAATKQLTGYKICRYAQFPDNKKAILPSILQELLAARKATK 798
Query: 589 ADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHT 648
+++ DP +K +LD RQL++KI+ANS+YG TGA +++++S TS GR ++ +
Sbjct: 799 KQMQKETDPFKKNILDKRQLSIKITANSLYGQTGAKTSSFYEMDVAASTTSVGRTLLIYA 858
Query: 649 KKLVEDKF------TTVGGYEHNAEVIYGDTDSVMVQFGVPT-----------VEAAMKL 691
K+++E+ + T G + NAE IYGDTDSV F ++ +++
Sbjct: 859 KEIIENVYGNTIVDTKYGKMKSNAEYIYGDTDSVFFTFNFKDLKNNTLPDKQLLDMTIEV 918
Query: 692 GREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRD 751
+EA + +P LE+EK + P+ L+SKKRY G+ + + + GI RRD
Sbjct: 919 AKEAGHLCTSFLKEPHDLEYEKTFMPFCLLSKKRYVGMLYEDDINSCSRKSMGIVLKRRD 978
Query: 752 NCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE 811
N +VK++ + ++ ++DI ++ ++ + +++ + + LV+TK L +
Sbjct: 979 NAPIVKDVYGGIIDILMKEKDIEKSILFLDKMLENIIDENIIMDKLVVTKSLRSFYKN-P 1037
Query: 812 VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTH 871
+ AH LA RM RD +P GDR+P+V IK ++ E P ++ + ID
Sbjct: 1038 TRIAHCVLANRMGARDQKPSP--GDRIPFVYIKNENKQLQGDKIETPDFIKSEGLEIDYV 1095
Query: 872 YYLENQISKPLLRIFEPILKN 892
+Y+ NQI KP+++I+ +L +
Sbjct: 1096 FYITNQIMKPIIQIYSLVLND 1116
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 318 FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFI 377
FP+ D V + + GE++P++ + + L I + + TE+DVL AW I
Sbjct: 329 FPQLKGDQVTFIGSTFVNYGEEKPYLNHCICLNDSHNIGDNVLECYSTEKDVLCAWSRLI 388
Query: 378 REVDPDVMIGYNICKFDLPYLIEK 401
+ DPD++IGYNI FD P++ E+
Sbjct: 389 MKEDPDIIIGYNIFGFDYPFMYER 412
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 21/212 (9%)
Query: 122 IFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN-SKVPQFV 180
++G+ + VH F P+ YI F +E + N++ + + +
Sbjct: 1 MYGLDEHRTTYSIMVHNFTPFVYIKVSNDWNKHKTDEF---IEHLKQHPNKSIAYGSKDI 57
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGI--------LDRGIQLDGLGMK 232
E V+K+S+ + K F+ I + V R + L++G K
Sbjct: 58 VSYEWVKKKSLYGFDANKYYNFIYISCKNMSFVYKLRSLYYEKDTQQLNKGYLYKNAYTK 117
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHP 292
YE + LRF NI WIEV K KT + ++ +C Y +I
Sbjct: 118 ---IYECMIPPLLRFFHIQNISPSGWIEVKRFSRNKMKKT--HMDVDINCDYKNIYPLDK 172
Query: 293 EGEFSKMAPFRILSFDIECAGRKGHFPEPTHD 324
E M P++I SFDIE G FPE D
Sbjct: 173 EI----MVPYKICSFDIEANSSHGDFPEAAKD 200
>gi|294890587|ref|XP_002773223.1| dna polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878257|gb|EER05039.1| dna polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 247
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 159/208 (76%), Gaps = 2/208 (0%)
Query: 655 KFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKV 714
++ GY H+A VIYGDTDSV V+FG TVE AMKLG+EAA ++S TFI PIKLEFEKV
Sbjct: 40 RYRVENGYAHDATVIYGDTDSVFVKFGCDTVEEAMKLGQEAAAFVSTTFIDPIKLEFEKV 99
Query: 715 YYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP 774
Y+PYLL++KKRYAGLYWTNP K DK+D KGIETVRRDNC LVK +V L+ IL + +
Sbjct: 100 YFPYLLMNKKRYAGLYWTNPVKADKLDAKGIETVRRDNCELVKVVVENTLNIILKESSLD 159
Query: 775 GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDD--YEVKAAHVELAERMRKRDAATAP 832
A+ +++ T+S+LL N++D+S+LVI+K L K +D Y K AHVELA+RM +RD AP
Sbjct: 160 RAIAFIRKTLSELLQNKVDMSMLVISKSLAKGMEDGAYAAKQAHVELAKRMAQRDPGNAP 219
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIY 860
+GDR+ YVII+A KG YE++EDP+Y
Sbjct: 220 AIGDRIQYVIIRAPKGVAQYEKAEDPLY 247
>gi|452210573|ref|YP_007490687.1| Archaeal DNA polymerase I [Methanosarcina mazei Tuc01]
gi|452100475|gb|AGF97415.1| Archaeal DNA polymerase I [Methanosarcina mazei Tuc01]
Length = 926
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 282/534 (52%), Gaps = 54/534 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
EK DV + + N + E + Y +DA L L+ L + Y+ +A+V+G +
Sbjct: 349 EKLDVPPLEMEEHWNDSGEKFLKFVDYARRDAELALELVLNLRLLDKYIALAQVSGSLLQ 408
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSE--------QGTYEGATVLEARAGFY 511
++ GQ+ V + LLR+ ++ VI + + G E +G VLE + G
Sbjct: 409 EIVDGGQTSMVETLLLREFGLRDRVI--LPKPGDELSAERYDMSSDLKGGEVLEPKKGLL 466
Query: 512 EKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKG 571
E + LD+ SLYP+IMMA+NLCY+T+VT + P K PSG FV + +G
Sbjct: 467 EN-VLILDYKSLYPTIMMAHNLCYTTVVTK------DRPDGEAIKPPSGGEFVPPEVYRG 519
Query: 572 ILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCI 631
I+P ILE+LL R K ++ D E VLD QLA+KI NS YG++G +L +
Sbjct: 520 IVPSILEDLLNQRGETKKRMRLTSDKNEYRVLDATQLAIKILLNSFYGYSGYARARLYSL 579
Query: 632 EISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNA------------------EVIYGDT 673
++++VTS+GR I +T+ L+ + + + A V YGDT
Sbjct: 580 TLANAVTSFGRSNILNTRDLINNDIGKIVLRDSAALFLEEAGEISPQDRVIDLSVAYGDT 639
Query: 674 DSVMVQF---GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
DSV V G ++E +G + +S + P++LEFE + LLI+KKRYA L+
Sbjct: 640 DSVFVHCRSEGDLSLEDVSLVGNRLSQIVSASLPDPMELEFEAIAKRALLIAKKRYA-LW 698
Query: 731 WTNPEKF---DKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDL 787
P +K+ KG+ETVRRD C L + E L +L+ D+ GAV++V++ +SD
Sbjct: 699 LFEPRNSGWENKIKVKGMETVRRDWCELTSITLNEVLKLVLIKGDVDGAVEHVRNVVSD- 757
Query: 788 LMNRMD-------LSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPY 840
+ +D + LV+T+ LT+ D Y+ K H+ +AE ++KR P++G R+P+
Sbjct: 758 -VRNLDPGKDAGIIEKLVLTRTLTRRTDSYKNKQPHLTVAENLKKR-TGVMPSIGTRIPF 815
Query: 841 VIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNAS 894
VI+ A KG +R+EDP YV E+N+P+D YY++ QI P+ RI E N S
Sbjct: 816 VIV-AGKGL-FVDRAEDPDYVREHNVPLDVDYYVKKQILPPVERILEVFGVNVS 867
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 148/316 (46%), Gaps = 46/316 (14%)
Query: 96 LDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDD 155
+D DY I DS +IR+FG +G SVCC V FEPYFY+ D
Sbjct: 1 MDADYEIVDSR-----------PVIRLFGRGADGKSVCCFVPDFEPYFYLKASG-----D 44
Query: 156 ISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVAS 215
+ ++++ + V+ +E+++K + YQ+ K++ L+I +LP V
Sbjct: 45 LHAVARLIKDTFEQ----------VKKVEIIEKFEPVGYQKTKTK-MLRITTSLPRDVPE 93
Query: 216 CRGILDRGIQLDGL--GMKSFMTYESNVLFALRFMIDCNIVGGNWIEV------PVGKYR 267
R D +++ + + YES++LF RF+ID ++ G WI P R
Sbjct: 94 IR---DEVLKIQDVLKAEGDWQVYESDILFRNRFLIDRDLGGMVWISAEGKPVDPARYLR 150
Query: 268 KTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVI 327
+ S C+ +F C S + S E +AP + LSFDIEC G P P P+I
Sbjct: 151 AGSAGNSRCE-KFACDTSILGSELKRVENLTIAPLKYLSFDIECLPLDGGMPSPDVSPII 209
Query: 328 QVANLV--TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVM 385
++ +G K ++ L A + DV+ + E D+L + + I E DPD++
Sbjct: 210 MISFSFEPAYKGHK-----TLILLAKPADGMNGDVLPCKDETDMLNRFFEIICEYDPDIV 264
Query: 386 IGYNICKFDLPYLIEK 401
GYN FD+PY+ ++
Sbjct: 265 AGYNHQDFDIPYITDR 280
>gi|21228106|ref|NP_634028.1| DNA polymerase delta catalytic subunit [Methanosarcina mazei Go1]
gi|20906547|gb|AAM31700.1| DNA polymerase delta catalytic subunit [Methanosarcina mazei Go1]
Length = 933
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 282/534 (52%), Gaps = 54/534 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
EK DV + + N + E + Y +DA L L+ L + Y+ +A+V+G +
Sbjct: 356 EKLDVPPLEMEEHWNDSGEKFLKFVDYARRDAELALELVLNLRLLDKYIALAQVSGSLLQ 415
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSE--------QGTYEGATVLEARAGFY 511
++ GQ+ V + LLR+ ++ VI + + G E +G VLE + G
Sbjct: 416 EIVDGGQTSMVETLLLREFGLRDRVI--LPKPGDELSAERYDMSSDLKGGEVLEPKKGLL 473
Query: 512 EKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKG 571
E + LD+ SLYP+IMMA+NLCY+T+VT + P K PSG FV + +G
Sbjct: 474 EN-VLILDYKSLYPTIMMAHNLCYTTVVTK------DRPDGEAIKPPSGGEFVPPEVYRG 526
Query: 572 ILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCI 631
I+P ILE+LL R K ++ D E VLD QLA+KI NS YG++G +L +
Sbjct: 527 IVPSILEDLLNQRGETKKRMRLTSDKNEYRVLDATQLAIKILLNSFYGYSGYARARLYSL 586
Query: 632 EISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNA------------------EVIYGDT 673
++++VTS+GR I +T+ L+ + + + A V YGDT
Sbjct: 587 TLANAVTSFGRSNILNTRDLINNDIGKIVLRDSAALFLEEAGEISPQDRVIDLSVAYGDT 646
Query: 674 DSVMVQF---GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
DSV V G ++E +G + +S + P++LEFE + LLI+KKRYA L+
Sbjct: 647 DSVFVHCRSEGDLSLEDVSLVGNRLSQIVSASLPDPMELEFEAIAKRALLIAKKRYA-LW 705
Query: 731 WTNPEKF---DKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDL 787
P +K+ KG+ETVRRD C L + E L +L+ D+ GAV++V++ +SD
Sbjct: 706 LFEPRNSGWENKIKVKGMETVRRDWCELTSITLNEVLKLVLIKGDVDGAVEHVRNVVSD- 764
Query: 788 LMNRMD-------LSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPY 840
+ +D + LV+T+ LT+ D Y+ K H+ +AE ++KR P++G R+P+
Sbjct: 765 -VRNLDPGKDAGIIEKLVLTRTLTRRTDSYKNKQPHLTVAENLKKR-TGVMPSIGTRIPF 822
Query: 841 VIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNAS 894
VI+ A KG +R+EDP YV E+N+P+D YY++ QI P+ RI E N S
Sbjct: 823 VIV-AGKGL-FVDRAEDPDYVREHNVPLDVDYYVKKQILPPVERILEVFGVNVS 874
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 150/319 (47%), Gaps = 46/319 (14%)
Query: 93 FQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMG 152
FQ LD DY I DS +IR+FG +G SVCC V FEPYFY+
Sbjct: 5 FQILDADYEIVDSR-----------PVIRLFGRGADGKSVCCFVPDFEPYFYLKASG--- 50
Query: 153 PDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM 212
D+ ++++ + V+ +E+++K + YQ+ K++ L+I +LP
Sbjct: 51 --DLHAVARLIKDTFEQ----------VKKVEIIEKFEPVGYQKTKTK-MLRITTSLPRD 97
Query: 213 VASCRGILDRGIQLDGL--GMKSFMTYESNVLFALRFMIDCNIVGGNWIEV------PVG 264
V R D +++ + + YES++LF RF+ID ++ G WI P
Sbjct: 98 VPEIR---DEVLKIQDVLKAEGDWQVYESDILFRNRFLIDRDLGGMVWISAEGKPVDPAR 154
Query: 265 KYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHD 324
R + S C+ +F C S + S E +AP + LSFDIEC G P P
Sbjct: 155 YLRAGSAGNSRCE-KFACDTSILGSELKRVENLTIAPLKYLSFDIECLPLDGGMPSPDVS 213
Query: 325 PVIQVANLV--TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDP 382
P+I ++ +G K ++ L A + DV+ + E D+L + + I E DP
Sbjct: 214 PIIMISFSFEPAYKGHK-----TLILLAKPADGMNGDVLPCKDETDMLNRFFEIICEYDP 268
Query: 383 DVMIGYNICKFDLPYLIEK 401
D++ GYN FD+PY+ ++
Sbjct: 269 DIVAGYNHQDFDIPYITDR 287
>gi|51518080|ref|YP_068007.1| BALF5 [Macacine herpesvirus 4]
gi|18025531|gb|AAK95475.1| BALF5 [Macacine herpesvirus 4]
Length = 1015
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 269/548 (49%), Gaps = 58/548 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVH+ I L RRRL +YC++D+ L LL+ + E+A++ +P
Sbjct: 467 KKEDVHYKEIPRLFAEGPRGRRRLGMYCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCR 526
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L GQ I+V S LL A+++N ++P + S++ Y+GATV++ +GFY P+ +D
Sbjct: 527 RVLDDGQQIRVFSCLLAAAQKENFILP--MPSASDRDGYQGATVIQPLSGFYNSPVLVVD 584
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKL-NLPP----ECVNKTPSGETFVKSNLQKGILP 574
FASLYPSI+ A+NLCYST++TPE+ +L L P E T FVK ++ + L
Sbjct: 585 FASLYPSIIQAHNLCYSTMITPEEEHRLAGLRPGEDYESFRLTGGTYHFVKKHVHESFLA 644
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
+L LA RK K L +DP +K +LD +QLA+K + N+VYGFTG G PC+ I+
Sbjct: 645 SLLTSWLAKRKAIKKLLAACEDPRQKTILDKQQLAIKCTCNAVYGFTGVANGLFPCLSIA 704
Query: 635 SSVTSYGRQMIEHTKKLVE--------------DKFTTVGGYEHNAEVIYGDTDSVMVQF 680
+VT GR M+E K VE + + + E VIYGDTDS+ ++
Sbjct: 705 ETVTLQGRTMLERAKAFVEALSPADLQALAPTPNAWAPLNP-EGRLRVIYGDTDSLFIEC 763
Query: 681 -GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
G E AA F+ PI LE EK + +LI+KKRY G+ K
Sbjct: 764 RGFSEGETLRFAEALAAHTTRSLFVAPISLEAEKTFSCLMLITKKRYVGVLTDG-----K 818
Query: 740 MDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA----------------------- 776
KG+E VR+ C V+ L +L D + A
Sbjct: 819 TLMKGVELVRKTACKFVQARCRRVLDLVLADARVKEAASLLSRRPFQESFSEGLPAGFLP 878
Query: 777 -VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNV 834
+ + +DL R+ + L + L++ Y+ + H+ + ++ +R+ P +
Sbjct: 879 VIDILNEAYADLREGRVPMGELCFSTELSRKLSAYKSTQMPHLAVYQKFVERNEEL-PQI 937
Query: 835 GDRVPYVIIK---AAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILK 891
DR+ YV ++ KGA+ E +EDP Y + IP+ +Y +++ + I + +
Sbjct: 938 HDRIQYVFVEPKGGIKGARKTEMAEDPAYAERHGIPVAIDHYF-DKLLQGAANILQCLFD 996
Query: 892 NASKELLS 899
N S LS
Sbjct: 997 NNSAATLS 1004
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 148/287 (51%), Gaps = 25/287 (8%)
Query: 119 IIRIFGVTR-EGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVP 177
+I++ G + +G SVC V G + YFY PQG+ D+ +L +R + + K P
Sbjct: 126 VIKLLGRRKADGASVCVNVFGQQAYFYAGAPQGL---DVEF--AVLNA-LRASTFDRKTP 179
Query: 178 QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
V +E V +RSIM Y Q + KI ++ P V+ L D G + F
Sbjct: 180 CRV-SVERVTRRSIMGYGNQAGV-YHKITLSHPNSVSHVATWLQ-----DKHGCQIF--- 229
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFS 297
E+NV A RF++D + V W R + SY +LE+DC D+ R E S
Sbjct: 230 EANVDAARRFVLDNDFVTFGWYSCRRAIPRLQQRD-SYAELEYDCEVGDLSVRR---EDS 285
Query: 298 KMAPFRILSFDIECAGRKGHFPEPTH--DPVIQVANLVTLQGEKQPFIRNVM-TLKSCAP 354
+ L+FDIEC G +G FP T+ D ++Q++ ++ GE+ R ++ TL +C
Sbjct: 286 SWPSYTALAFDIECLGEEG-FPTATNEADLILQISCVLWSTGEEAGRYRRILLTLGTCED 344
Query: 355 IVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
I GV+V F +E D+L A+ IR++ +++ GYN+ FD PY++++
Sbjct: 345 IEGVEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYVLDR 391
>gi|196017081|ref|XP_002118387.1| hypothetical protein TRIADDRAFT_34128 [Trichoplax adhaerens]
gi|190579017|gb|EDV19126.1| hypothetical protein TRIADDRAFT_34128 [Trichoplax adhaerens]
Length = 765
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 190/603 (31%), Positives = 296/603 (49%), Gaps = 49/603 (8%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQ 495
RLL+ I E AR+ G+ +LSRG ++ S LLR AK N + +V + +Q
Sbjct: 148 RLLETFDMIDRSSEFARLYGIQFYSVLSRGSQFRIESMLLRLAKPMNYIPVSVSE---KQ 204
Query: 496 GTYEGA-----TVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-------LVTPED 543
T+ A V+E + FY P+ LDF SLYPS+M+AYN CY+T + T ++
Sbjct: 205 RTWMKAPEVIPLVMEPESRFYSNPVLVLDFQSLYPSVMIAYNYCYTTCLGRISGIATDKE 264
Query: 544 AR----KLNLPPECVNK-------TPSGETFVKSNLQKGILPEILEELLAARKRAKADLK 592
+ +P + K P G +VK +++KG++P +L+E+L R K +K
Sbjct: 265 FKFGCTSHQVPLSLLKKLRNDISIAPCGAVYVKDHIRKGVIPRMLKEILDTRIMIKRAMK 324
Query: 593 EAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKK 650
+ KD +LD RQ LK+ AN YG+ GAT G++P IE++ S+ S R+ +E K
Sbjct: 325 DCKDNKSLHRLLDIRQFGLKMIANVTYGYAGATFSGRMPLIELADSIVSKARETLERAIK 384
Query: 651 LVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLE 710
+V TT + NA V+YGDTDS+ V T A ++GRE A+ I+ KP+ L+
Sbjct: 385 IVN---TTS---KWNARVVYGDTDSMFVLLEGATKARAFEIGREIAETITSMNPKPVALK 438
Query: 711 FEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILV 769
FEKV+ P LLI+KKRY G Y + +K D KGIETVRRD C V ++ + + +
Sbjct: 439 FEKVFLPSLLITKKRYVGYAYESADQKEPTFDAKGIETVRRDGCPAVSKIMEKAIRILFS 498
Query: 770 DRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRD 827
RD+ +YV L+ ++ ++ VI K + Y+ A +E+ +++ D
Sbjct: 499 RRDMSLVKKYVLHKCRMLIEGKVAINDYVIAKEY-RGKSTYKPGACVPALEITKQLLAHD 557
Query: 828 AATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIF 886
+ P +G+RVPYVI+ G P +L + N+ ++ YY+ QI L R+
Sbjct: 558 RRSEPRIGERVPYVIVYGVPGVPLIRLVRRPRELLNDPNLRLNATYYITKQILPALDRLL 617
Query: 887 EPILKNASKELLSGDHTRSISISTPSNS-------GIMKFAKRQLSCIGCKALISNGTLC 939
I E + RSI + S G++ L C+ C+ + +G +C
Sbjct: 618 SLI--GIDVESWHAELPRSIRSDVINQSQFQVAKQGVISQYFSSLHCLVCEEMTVDG-VC 674
Query: 940 SHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQ 999
C + ++ + E L C C G + C S DCPI + K+ Q
Sbjct: 675 PSCIRDSQKAIMIAQQRISDFERKNRHLKEICCNCIGQRVINAECISLDCPILFETKRNQ 734
Query: 1000 KDM 1002
+D+
Sbjct: 735 RDV 737
>gi|389751639|gb|EIM92712.1| hypothetical protein STEHIDRAFT_144019 [Stereum hirsutum FP-91666
SS1]
Length = 1703
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 188/615 (30%), Positives = 291/615 (47%), Gaps = 54/615 (8%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGS 493
++LD+ I E ARV GV +L+RG KV + +LR AK ++ V+ P+ G
Sbjct: 1079 QILDEAETITKTAEFARVFGVDFMDVLNRGSQFKVEAFMLRIAKPESFVLLSPSKADVGK 1138
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVT------------- 540
+ ++E ++ FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 1139 QNAAECMPLIMEPQSAFYSSPVVVLDFQSLYPSIMIAYNYCYSTCLGRVTDFKGQNKFGV 1198
Query: 541 ---PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDP 597
A L+ + +N P+G +VK ++KG+L +L ELL R K +K KD
Sbjct: 1199 TELERPAGLLDTLQDYINVAPNGMMYVKPQVRKGLLGRMLTELLETRVMVKQAMKGVKDN 1258
Query: 598 LE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDK 655
+ LD RQL LK AN YG+T A+ G++P +E++ S+ GR+ +E L+E
Sbjct: 1259 KTLRRTLDARQLGLKFIANVTYGYTSASFSGRMPAVEVADSIVQSGRETLEKAISLIEST 1318
Query: 656 FTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
+ +A+V+YGDTDS+ + T + A ++G + AD I+ P+KL+FEKVY
Sbjct: 1319 ------RKWDAKVVYGDTDSLFIYLPGRTKDQAFRIGHDIADTITKLNPPPVKLKFEKVY 1372
Query: 716 YPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP 774
+L++KKRY G NP+ + + D KGIETVRRD + + L + +D+
Sbjct: 1373 SGCVLLAKKRYVGFKHENPDDLEPVFDAKGIETVRRDGIPAQQKMTENTLKILFRTQDLS 1432
Query: 775 GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH--VELAERMRKRDAATAP 832
+Y + + LL NR+ + + + + K G E V +A + +D
Sbjct: 1433 AVKEYCCQSWAKLLENRVSVQDFIFAREV-KMGTYSEKVPPQPGVAVAAQRLLQDPMDEA 1491
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP-IDTHYYLENQISKPLLRIFEPILK 891
GDRVPYVI + + +R+ P VL + +D HYY+ + PL RIF L
Sbjct: 1492 AYGDRVPYVITRGEPHTRLVDRAVAPEVVLHSRSKYLDGHYYISRVLIPPLERIFN--LV 1549
Query: 892 NASKELLSGDHTRSIS-------ISTPSNSGIMKFAK------------RQLSCIGCKAL 932
A +R I +STP +++ + C+ C AL
Sbjct: 1550 GADVRGWYDGMSRKIRAENGDPLLSTPKKPEVIEPDMDAPEKPKIDEHFHSVQCMTCDAL 1609
Query: 933 ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPI 991
G +C C+ R +S++ E + C C S + V C S DC
Sbjct: 1610 TPYG-ICEDCRARPQATAAALLSRLHLAEDRLRSVHELCASCTAVSPLEPVRCESLDCQY 1668
Query: 992 FYRRKKAQKDMAEAK 1006
FY RKK + +A+++
Sbjct: 1669 FYERKKCETRVADSR 1683
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 21/187 (11%)
Query: 86 SQCQSIMFQQLDIDYVI---GDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPY 142
SQ ++ Q +ID+ + + + LLP A +IRIFG + G C VH PY
Sbjct: 4 SQEPALRVQITNIDHTMVNPSELDNTLLP----KAPVIRIFGTSSTGQKACLHVHQVYPY 59
Query: 143 FYISCPQGMGPDDISHFHQILEGRMREA-----NRNSKVP--QFVRHIEMVQKRSIMYYQ 195
F + P PD ++ + L + A RN P +FVR I +V + + +Y
Sbjct: 60 FMVEYPGKTDPDSVNRYIGTLIRSLNLALAVSYKRNPDSPNCRFVRAIVLV--KGVHFYG 117
Query: 196 QQKSQP-FLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIV 254
S FLKI + P I+ G +D F +E ++ F L+F+ D N+
Sbjct: 118 FHSSYSLFLKIHIVDPAYFTRSIAIMQSGSVMD----TRFRVFEGHLSFILQFLCDFNLY 173
Query: 255 GGNWIEV 261
G WIE+
Sbjct: 174 GCGWIEL 180
>gi|50549261|ref|XP_502101.1| YALI0C21648p [Yarrowia lipolytica]
gi|49647968|emb|CAG82421.1| YALI0C21648p [Yarrowia lipolytica CLIB122]
Length = 1338
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 201/684 (29%), Positives = 313/684 (45%), Gaps = 50/684 (7%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVH-HSIISDLQNGNAETRRRLAV 425
R VL WR EV ++ Y + L E+ + H ++++ G+ R+ L
Sbjct: 663 RHVLNLWRMIRGEVS---LLKYTLENVVFHVLHERIPFYTHDTLTEMCVGSLSDRKLLVE 719
Query: 426 Y-CLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV 484
Y C + Y Q LL L + E ARV G+ S + +RG KV S L R K +N +
Sbjct: 720 YKCTRSNYNLQ-LLSTLEIVSRTAEQARVVGIDFSSVYTRGSQYKVESFLARLTKSENFM 778
Query: 485 I--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV--- 539
+ P+ +Q G + A V+E + Y P+ LDF SLYPS+++A+N CYST +
Sbjct: 779 LASPSREQVGQQNALECIALVMEPESRLYTSPVLVLDFQSLYPSVILAHNYCYSTCLGKW 838
Query: 540 -------TPEDARKLNLPPECVNK---------TPSGETFVKSNLQKGILPEILEELLAA 583
KL P V + +P+G FVK +++ +L +L E+L
Sbjct: 839 TDFEKDGNTLGTEKLFYKPSLVKRLLTKDDVTISPNGLVFVKPHIRVSLLARMLGEILET 898
Query: 584 RKRAKADLKEAKDPLEKAVLD-GRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K K +D + L+ RQLALK+ AN YG+T A+ G++PC EI+ ++ G
Sbjct: 899 RFMVKDTAKLDRDNVSFQRLNHNRQLALKLVANVTYGYTSASFSGRMPCAEIADAIVQSG 958
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E ++ G + A+V+YGDTDS+ V T + A K+G E AD I+
Sbjct: 959 RETLEKCIDVIH------GSDKWAAKVVYGDTDSLFVCLPGRTKDEAFKIGTEIADTITS 1012
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGLYWT-NPEKFDKMDTKGIETVRRDNCLLVKNLV 760
P+KL+FEKVY P +LISKKRY G W + + + D KGIETVRRD + +
Sbjct: 1013 ANPAPMKLQFEKVYLPCMLISKKRYVGYKWEYSKQMYPIFDAKGIETVRRDGTPAAQKIE 1072
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE--VKAAHVE 818
+ L + D+ Y+ + +L ++ + K + K G E V A +
Sbjct: 1073 EKALRILFDTADLSLVKSYLYEQWTKILTGKVSIQDFCFAKEV-KLGQYKEGGVLPAGAK 1131
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLE--NNIPIDTHYYLEN 876
++ D P +R+PYV++ ++ +R P ++ N++ +D YY+
Sbjct: 1132 ISAEKMAVDMRFEPQYKERIPYVVVAGPPKSRLIDRCVSPEELVRNANSLILDADYYIHK 1191
Query: 877 QISKPLLRIFEPILKNASKELLSGDHTRSISI-----STPSNSGIMKFAKRQLSCIGCKA 931
+ PL R F + + K R +N +K SCI CK
Sbjct: 1192 TLIPPLDRFFNCVGASVLKWYEEMPKKRRYEFYQTVSRAKTNQTTLKSYAVSNSCIVCKT 1251
Query: 932 LISNG--TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDC 989
++G LC+ C+ S ++ E L T C +C G + C S+DC
Sbjct: 1252 AQTSGLSKLCATCESDPGHATFVLNSDLRYREKRLDELNTICAQCSGDF--ETRCESQDC 1309
Query: 990 PIFYRRKKAQKDMAEAKLQLDRWN 1013
PI+Y R KA +A +L W
Sbjct: 1310 PIYYSRVKAVSKAEDASERLVEWT 1333
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYIS-CPQGMGPDD----ISHFHQILEGRMR-EANR 172
++RIFG T +G S C VH YFYI + P D I+ ++ + ++R + R
Sbjct: 44 VLRIFGGTSDGLSSCAHVHNVFQYFYIPYTGPSLSPADSEPFIADMYRRINLQLRSKRTR 103
Query: 173 NSKVPQ---FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL 229
K+P+ F+ +I + K + Y + + +LKIVV P+ V + G+
Sbjct: 104 GEKLPEECSFLANIVLC-KATPFYGYHEGWRYYLKIVVVDPSHVGMLVDMFRNGV----F 158
Query: 230 GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIIS 289
G +ES++ + L+F D N+ G W+E R+ +S + E D I++
Sbjct: 159 GWDHSRVFESHLSYILQFFCDYNLHGCGWMEASRYMMRREG-MISKSEFEVDLQAEYILN 217
Query: 290 R 290
R
Sbjct: 218 R 218
>gi|343963258|gb|AEM72552.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 946
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 242/457 (52%), Gaps = 53/457 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + + R + YC+ D+ L +L KL+F + +AR++ + ++
Sbjct: 494 KKHSVPYKQIPVLFRRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMN 553
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L A+++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 554 KVIFDGQQSRIFTCMLAAARREGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 611
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T D L + T +G FVK +++K IL ++L
Sbjct: 612 FASLYPSIIQAYNLCYCTLITDNDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLL 671
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KDPL + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 672 TSWLAERKAVREKLKHCKDPLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 731
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V +V+YGDTDSV V +
Sbjct: 732 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVL--L 789
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 790 CGIEDADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 845
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 846 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 905
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDYE 811
L NR+D+ L ++ LT+ D Y+
Sbjct: 906 KLVALITDARERLYENRVDIHELQLSATLTQACDKYK 942
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 152/336 (45%), Gaps = 39/336 (11%)
Query: 104 DSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D + E LP S + AII + G T +G VC VHG YFY++ D
Sbjct: 139 DVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATRDA-- 196
Query: 159 FHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM-VASCR 217
+++ +E++ S V ++ V K S+M + S P+L + + + + R
Sbjct: 197 VSKVMSNLEKESSSCSYV------VKPVNKMSLMGFNTNTS-PYLMMSFSNHFVGKEAAR 249
Query: 218 GILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQ 277
+ D LD F +E V RF++D W + R+T+K S C+
Sbjct: 250 NLKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD-SNCE 298
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQVANLV 333
LE DC D+ E+ ++ ++FDIEC FP+ T+ D +IQ++ V
Sbjct: 299 LELDCCVGDLQVIRDRVEWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS-CV 354
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
+ +++ TL SCA I GV + +E +++ ++ F+R P+ + GYNI F
Sbjct: 355 CFDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAF 414
Query: 394 DLPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
D+PY+I + + ++Q G +R + C K
Sbjct: 415 DIPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 445
>gi|343963280|gb|AEM72566.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 947
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 241/457 (52%), Gaps = 53/457 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + + R + YC+ D+ L +L KL+F + +AR++ + ++
Sbjct: 494 KKHSVPYKQIPVLFRRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMN 553
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L A+++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 554 KVIFDGQQSRIFTCMLAAARREGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 611
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T D L + T +G FVK +++K IL ++L
Sbjct: 612 FASLYPSIIQAYNLCYCTLITDNDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLL 671
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KDPL + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 672 TSWLAERKAVREKLKHCKDPLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 731
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V +V+YGDTDSV V
Sbjct: 732 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVLLC- 790
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 791 -GIEDADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 845
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 846 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 905
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDYE 811
L NR+D+ L ++ LT+ D Y+
Sbjct: 906 KLVALITDARERLYENRVDIHELQLSATLTQACDKYK 942
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 152/336 (45%), Gaps = 39/336 (11%)
Query: 104 DSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D + E LP S + AII + G T +G VC VHG YFY++ D
Sbjct: 139 DVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATRDA-- 196
Query: 159 FHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM-VASCR 217
+++ +E++ S V ++ V K S+M + S P+L + + + + R
Sbjct: 197 VSKVMSNLEKESSSCSYV------VKPVNKMSLMGFNTNTS-PYLMMSFSNHFVGKEAAR 249
Query: 218 GILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQ 277
+ D LD F +E V RF++D W + R+T+K S C+
Sbjct: 250 NLKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD-SNCE 298
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQVANLV 333
LE DC D+ E+ ++ ++FDIEC FP+ T+ D +IQ++ V
Sbjct: 299 LELDCCVGDLQVIRDRVEWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS-CV 354
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
+ +++ TL SCA I GV + +E +++ ++ F+R P+ + GYNI F
Sbjct: 355 CFDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAF 414
Query: 394 DLPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
D+PY+I + + ++Q G +R + C K
Sbjct: 415 DIPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 445
>gi|389566299|gb|AFK83885.1| B54 [Bat betaherpesvirus B7D8]
Length = 1081
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 165/559 (29%), Positives = 275/559 (49%), Gaps = 75/559 (13%)
Query: 401 KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISF 460
K+D+ + I N+E R R+ YC++DA L + L +++ + + +AR+ +P+
Sbjct: 492 KDDLSYKEIPKEFIRNSEGRARVGKYCVQDAALVRDLFERINYHYEAAAVARLARIPMRK 551
Query: 461 LLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT----------------------- 497
++ GQ ++V + +L +A +N+V+P+ + G+ G
Sbjct: 552 VIFEGQQVRVYTCILEEAAARNMVLPSFPRKGASTGAVEDGSGEGIGSEEPATREGDGRV 611
Query: 498 --YEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVN 555
Y+GATV E G+++ P+ DFASLYPSI+MA+N+CY TLVT + A +N+
Sbjct: 612 CGYQGATVFEPDIGYFDTPVTVFDFASLYPSIIMAHNICYCTLVTDDRADSMNVDDLFCV 671
Query: 556 KTPSG--ETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKIS 613
G FVK ++++ I+ E+L + L R+ + ++E DP+ + +LD Q ALK++
Sbjct: 672 DLGDGVCHRFVKESVRRSIMSELLGKWLTQRRLVREAMRECADPVRRLLLDKEQAALKVT 731
Query: 614 ANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGY----------- 662
N+ YGFTG G +PC+ I++S+T GR M+ T + + G
Sbjct: 732 CNAFYGFTGVASGMMPCLPIAASITRIGRDMLSKTANYIHSNLSDRAGLGTFFADTDFIP 791
Query: 663 --EHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS-GTFIKPIKLEFEKVYYPYL 719
VIYGDTDSV V +A ++ + A +I+ F +P+KLEFEK + +
Sbjct: 792 DERVAVRVIYGDTDSVFVNTRGVRTDALIRSAPDIAAHITCALFREPVKLEFEKTFASLM 851
Query: 720 LISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI------ 773
+I KKRY G + + KG+E VR+ C VK +V E L ++ D ++
Sbjct: 852 MICKKRYIGRVHGS----SALTMKGVELVRKTACDFVKRVVREILERLFNDPEVSAAAVR 907
Query: 774 --------------PGAVQYVKSTISD----LLMNRMDLSLLVITKGLTKTGDDYEVKA- 814
P + + D L +N +++ LV + L++ Y+ K
Sbjct: 908 LSEMSMEELRKDGLPSGFYPIIGILCDARDKLHLNGVNVKDLVFSTVLSQEVSMYKQKNL 967
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAK---AYERSEDPIYVLENNIPIDTH 871
H+ + R+ R + P+VGDRV YV+ ++ + YE +EDP YV E+N+PI
Sbjct: 968 PHLAVIRRLAAR-SEELPSVGDRVQYVLTAGSEAERRTPNYELAEDPDYVAEHNVPIHAE 1026
Query: 872 YYLENQISKPLLRIFEPIL 890
Y E+ I K + PI
Sbjct: 1027 KYFEH-IVKAVTHAMSPIF 1044
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 159/369 (43%), Gaps = 51/369 (13%)
Query: 87 QCQSIMFQQLD-IDYVIGDSNRELLPLSSG-------SAAIIRIFGVTREGHSVCCKVHG 138
Q S++F D +D ++ E PL +G + ++R+FGV G SVC V G
Sbjct: 104 QQGSLVFHTYDQVDTLVFADATE--PLYAGYRHHVIPAGTVLRLFGVLESGDSVCVNVFG 161
Query: 139 FEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQK 198
YFY P PDD+ + + E K P F +++ V++ S+ Y +
Sbjct: 162 QLCYFYCEYPD---PDDLRAVIYTMASDVTE----PKTP-FSVNVKKVKRYSVYGYNTTE 213
Query: 199 SQPFLKIVVALPTMVASCRG-ILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGN 257
+ + +M ++D G + YE++ RF D I+
Sbjct: 214 IRDLNLVCFTNWSMCKKVTAALMDAG----------YRVYEASADPLTRFFTDRKILPFG 263
Query: 258 WIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGH 317
W + R+ +S E DC D+ + E ++ ++ LSFDIEC G
Sbjct: 264 WCSLRRYHVRRKP-WVSSAMFEIDCEVGDVSAIAQE---NRWPCYKCLSFDIECMSGSGA 319
Query: 318 FP--EPTHDPVIQVANLVTLQGEKQPFI---------RNVMTLKSCAPIVGVDVMSFETE 366
FP E D VIQ++ + G+++ + +++ T+ C PI GV V F +E
Sbjct: 320 FPVAERLEDMVIQISCVCYTVGDRRDGVSQRCDLQPRQHLFTVGPCDPIPGVCVYEFPSE 379
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLAVY 426
++L+ + F + P+ + GYNI FD+ Y++ + + + I N + +L+
Sbjct: 380 FEMLMGFFIFFKRYGPEFVTGYNINSFDVRYILTRVEKVYRI-------NVDHFTKLSYG 432
Query: 427 CLKDAYLPQ 435
AYLPQ
Sbjct: 433 GRMYAYLPQ 441
>gi|20089769|ref|NP_615844.1| DNA-directed DNA polymerase [Methanosarcina acetivorans C2A]
gi|19914708|gb|AAM04324.1| DNA-directed DNA polymerase [Methanosarcina acetivorans C2A]
Length = 937
Score = 256 bits (653), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 183/527 (34%), Positives = 279/527 (52%), Gaps = 54/527 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
EK DV + + N + + R+ Y +D+ L L+ +L + Y+ +A+V+G +
Sbjct: 357 EKLDVPPLEMEEHWNDSGDKFRKFVDYARRDSELALELVLELRLLDKYIALAQVSGSLLQ 416
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSE--------QGTYEGATVLEARAGFY 511
++ GQ+ V + LLR+ K+ VI + + G E +G VLE + G
Sbjct: 417 EIVDGGQTSMVETLLLREFGLKDRVI--LPKPGDELSAERYDMSSDLKGGEVLEPKKGLL 474
Query: 512 EKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKG 571
E + LD+ SLYP+IMMA+NLCY+T+VT + P K PSG FV + +G
Sbjct: 475 EN-VLILDYKSLYPTIMMAHNLCYTTVVT------RDRPDGKTIKPPSGGEFVPPEVFRG 527
Query: 572 ILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCI 631
I+P ILE+LL R K +K D E VLD QLA+KI NS YG++G +L +
Sbjct: 528 IVPSILEDLLNKRGDTKKRMKRTSDENEHRVLDATQLAIKILLNSFYGYSGYARARLYSL 587
Query: 632 EISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNA------------------EVIYGDT 673
++++VTS+GR I +T+ L+ + + A V YGDT
Sbjct: 588 TLANAVTSFGRSNILNTRDLINGRIGKIVLRNSAALLLEEAGKLSPQDRIVELSVAYGDT 647
Query: 674 DSVMVQF---GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLY 730
DSV V G ++E +G ++ +S + P++LEFE V LLI+KKRYA L+
Sbjct: 648 DSVFVHCKAKGDLSLEEVSLVGNRLSEIVSASLPDPMELEFESVAKRALLIAKKRYA-LW 706
Query: 731 WTNPEKF---DKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDL 787
P +K+ KG+ETVRRD C L + L +L++ D+ AV++V+ +SD+
Sbjct: 707 LFEPRNSGWENKIKVKGMETVRRDWCELTSITLNRVLEFVLIEGDVDKAVEHVRKVVSDV 766
Query: 788 LMNRMD-------LSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPY 840
+D + LV+T+ LT+ D Y+ K H+ +AE ++KR P++G R+P+
Sbjct: 767 --RNLDPGKDAGIIEKLVLTRTLTRKADSYKNKQPHLTVAENLKKR-TGIMPSIGTRIPF 823
Query: 841 VIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
VI A KG +R+EDP YV ENN+PID YY++ QI P+ RI E
Sbjct: 824 VIT-AGKGL-FVDRAEDPDYVRENNVPIDVDYYVKKQILPPVERILE 868
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 148/317 (46%), Gaps = 41/317 (12%)
Query: 93 FQQLDIDY-VIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGM 151
FQ LD DY V+ DS +IR+FG +G SVCC V FEPYFY+
Sbjct: 5 FQILDADYEVVNDS-----------GPVIRLFGRGADGKSVCCFVPDFEPYFYLKASG-- 51
Query: 152 GPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPT 211
D+ ++++ + V+ +E+V+K + YQ+ K + L++ LP
Sbjct: 52 ---DLHAVARLIKDTFEQ----------VKKVEIVEKFEPVGYQKTKKE-MLRVTTRLPK 97
Query: 212 MVASCRG-ILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV------PVG 264
V R IL L G + YES++LF RF+ID + G W+ PV
Sbjct: 98 DVPEIRDEILKIRDVLRAEG--DWQVYESDILFRNRFLIDRALGGMVWVSAEGKPVDPVR 155
Query: 265 KYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHD 324
+ S C+ F C + + S E +AP + L+FDIEC G P P
Sbjct: 156 YLGAGSAWRSRCE-NFACDSAVLASGLKRVENLAIAPLKYLAFDIECLPLDGGMPSPDVS 214
Query: 325 PVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDV 384
P+I ++ + + E + ++ K A + G DV+S E ++L + + I E DPD+
Sbjct: 215 PIIMIS--FSFEPEYKGHKTLILLAKPAAGMDG-DVLSCMDETEMLNKFFEIICEYDPDI 271
Query: 385 MIGYNICKFDLPYLIEK 401
+ GYN FD+PY+ E+
Sbjct: 272 VAGYNHQDFDIPYITER 288
>gi|425707264|ref|YP_007016461.1| E54 [Murid herpesvirus 8]
gi|283854606|gb|ADB44898.1| DNA polymerase [Murid herpesvirus 2]
gi|422900481|gb|AFX83378.1| E54 [Murid herpesvirus 8]
Length = 1040
Score = 256 bits (653), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 290/579 (50%), Gaps = 80/579 (13%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KED+ + I E R R+ YC++DA L + L + + F + +AR+ + +
Sbjct: 460 KKEDLSYKEIPKQFVAGDEGRARVGKYCVQDAVLVRDLFNVIAFHYEAAAIARLARISMR 519
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV---------------KQAGSEQGTYEGATVL 504
++ GQ I++ + LL + + LV+PN+ + + S Y+GATVL
Sbjct: 520 KVIFDGQQIRIYTCLLEECAARGLVLPNLPSNKDSGPRDEEMDDEDSNSRSVGYQGATVL 579
Query: 505 EARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPEDARK--LNLPPECVNKTPS 559
E GF+ P+ DFASLYPSIMM+ NLCYSTL+ +PE +R L +P +
Sbjct: 580 EPECGFHHAPVMVFDFASLYPSIMMSNNLCYSTLIVEGSPEVSRDDVLEVP------MSN 633
Query: 560 GETF--VKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSV 617
GETF VK ++Q IL E+L L RK + +K D ++K +D +QLALKI+ N+
Sbjct: 634 GETFKFVKQHVQGSILAELLVRWLTQRKLVREAMKTCDDEMQKMFMDKQQLALKITCNAF 693
Query: 618 YGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLV------EDKFTTVGGYEHNA----- 666
YGFTG G LPC+ I+SS+T GR M+ T + + D T V G+ A
Sbjct: 694 YGFTGVAAGMLPCLPIASSITKIGRDMLVSTSEYMVKNCNDVDFLTKVIGFPMEAIDPQA 753
Query: 667 ---EVIYGDTDSVMVQF-GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLIS 722
++IYGDTDSV F G+ K G AA+ F P+KLEFEK++ ++I
Sbjct: 754 LSVKIIYGDTDSVFGLFLGLDRDVLLKKAGDIAANITRALFKDPVKLEFEKMFISLMMIC 813
Query: 723 KKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP-GAVQYV 780
KKRY G +Y T DK+ KG++ VRR C VK +V + L+ + D + GA++
Sbjct: 814 KKRYIGKVYGT-----DKLCMKGVDLVRRTACPFVKTVVKDVLNMVFNDETVSEGAMKLS 868
Query: 781 KSTI-----------------------SDLLMNRMDLSLLVITKGLTKTGDDYEVK-AAH 816
+ DL +NR+ +S L ++ L++ Y+ K H
Sbjct: 869 SMSFDTLRKDGVPYEFGAVIRRLCQARDDLHLNRVPVSELTLSSVLSQHVSCYKQKNLPH 928
Query: 817 VELAERMRKRDAATAPNVGDRVPYVI---IKAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
+ + R+ R P++G+RV YV+ +A K YE +EDP YV+E +PI+ Y
Sbjct: 929 LAVIRRLAARQEEL-PSIGERVLYVLTMPTEAKKNVPNYEIAEDPKYVMEEKLPINAGKY 987
Query: 874 LENQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTP 911
+Q+ K + P+ K+ K +H + I P
Sbjct: 988 F-DQVIKAVTNTLMPVFPKDMPKREKFFNHILPVRIYLP 1025
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 138/289 (47%), Gaps = 27/289 (9%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+IR+FG G SVC V G + YFY +G D+ H + E + P
Sbjct: 116 VIRMFGSLESGTSVCVNVFGQKAYFYCESSEGEDLRDVVH-------DLAERTPEPRTP- 167
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
F I V++ SI Y + +I +M CR I G Q+ G K YE
Sbjct: 168 FTVSIAGVRRSSIYGYGLGNIKNLYRISFNNWSM---CRKI---GKQMIDEGRK---VYE 218
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
V RF+ID I W V R +K+ S Q+E DC D+++ E +
Sbjct: 219 MGVDPLTRFLIDKKIPSFGWCRVRRYCQRTVSKS-SNAQIEIDCEVGDVVAVE---EQTN 274
Query: 299 MAPFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQP-FI---RNVMTLKSC 352
P+R LSFDIEC G FP E D VIQ++ + + GEK +I +++ T+ C
Sbjct: 275 WPPYRCLSFDIECMSASGAFPSAENVDDIVIQISGVCHIIGEKPARWIVPEKHLFTIGPC 334
Query: 353 APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
API GV V +F +E ++L+ + F++ P+ + GYNI FD+ Y++ +
Sbjct: 335 APIPGVQVYTFPSEFEMLIGFMQFLKLFSPEFLTGYNINGFDIKYVLHR 383
>gi|2338448|gb|AAB67116.1| DNA-dependent DNA polymerase homolog [Feldmannia species virus]
Length = 996
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 248/443 (55%), Gaps = 27/443 (6%)
Query: 400 EKEDVHHS-IISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPI 458
+K+DV + I+S ++ + + +A YCL+DA+L RL+ L ++N +EM+++ VP+
Sbjct: 356 KKDDVSYEYILSACESKDPKKLGVIAKYCLQDAWLTLRLVSSLKDVYNGLEMSKLCVVPL 415
Query: 459 SFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEK-PIAT 517
S++ SRGQ IK LS +L + V + ++GATV++A GF+ K P+
Sbjct: 416 SYIESRGQQIKCLSLILDRV-HGEFVCNKASRVLPGGVKFQGATVIDATKGFHNKDPVVC 474
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPP---ECVNKTPS-GETFVKSNLQKGIL 573
LDFASLYPSI+ NLCY+T + ++ N+P E +P ETF KGIL
Sbjct: 475 LDFASLYPSIIRWKNLCYTTYLDSDEF--ANIPGVHYERFEISPGVYETFATRPGHKGIL 532
Query: 574 PEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEI 633
I E+L AR++ KA +K KD + +L+ +QLA K++ NS+YGF G G LP + I
Sbjct: 533 SAIEEDLGEARRQTKAAMKVEKDSKKLQLLNSKQLAQKVTMNSLYGFCGTVNGCLPLVAI 592
Query: 634 SSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVP-TVEA----- 687
+++VT GR MI+ T + T +GG VIYGDTDSVM F P TV
Sbjct: 593 AAAVTCTGRSMIKTTADFIR---TEMGG-----TVIYGDTDSVMCTFPAPQTVRGQGKRA 644
Query: 688 ----AMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTK 743
A +G A + F P+KLE+EK+Y+P+LLISKKRYA + + P+ KM T
Sbjct: 645 LLGHAYAMGLSAEEKSLSLFGHPVKLEYEKIYFPFLLISKKRYACMSYDRPDSEPKMSTS 704
Query: 744 GIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL 803
G+ TVRRDN +V++ + ++ R V+YVK+ +S L + + + L I+ L
Sbjct: 705 GLVTVRRDNAKVVRDCANGVISILMEGRGQGDVVEYVKTVLSKLENSEIGVEDLTISNEL 764
Query: 804 TKTGDDYEVKAAHVELAERMRKR 826
K D Y +AH LA ++ R
Sbjct: 765 KKHPDQYATPSAHSVLAGKLNAR 787
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYV-LENNIPIDTHYYLENQISKPLLRIFEPI 889
A ++G RVPYVI++ ERSEDP +V + +++ IDT YY++ Q+ P+L I E
Sbjct: 899 AQSLGSRVPYVIVRG--NGSVNERSEDPRFVEMADHLRIDTKYYIDQQLKNPILGIVEAF 956
Query: 890 LKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQL 924
AS E + + +R + I F +R +
Sbjct: 957 PDGRASLERVFREFSRRADNANKGRREITSFFERSV 992
>gi|197322442|ref|YP_002154715.1| putative DNA-dependent DNA polymerase [Feldmannia species virus]
gi|197130509|gb|ACH46845.1| putative DNA-dependent DNA polymerase [Feldmannia species virus]
Length = 1004
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 248/443 (55%), Gaps = 27/443 (6%)
Query: 400 EKEDVHHS-IISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPI 458
+K+DV + I+S ++ + + +A YCL+DA+L RL+ L ++N +EM+++ VP+
Sbjct: 364 KKDDVSYEYILSACESKDPKKLGVIAKYCLQDAWLTLRLVSSLKDVYNGLEMSKLCVVPL 423
Query: 459 SFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEK-PIAT 517
S++ SRGQ IK LS +L + V + ++GATV++A GF+ K P+
Sbjct: 424 SYIESRGQQIKCLSLILDRV-HGEFVCNKASRVLPGGVKFQGATVIDATKGFHNKDPVVC 482
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPP---ECVNKTPS-GETFVKSNLQKGIL 573
LDFASLYPSI+ NLCY+T + ++ N+P E +P ETF KGIL
Sbjct: 483 LDFASLYPSIIRWKNLCYTTYLDSDEF--ANIPGVHYERFEISPGVYETFATRPGHKGIL 540
Query: 574 PEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEI 633
I E+L AR++ KA +K KD + +L+ +QLA K++ NS+YGF G G LP + I
Sbjct: 541 SAIEEDLGEARRQTKAAMKVEKDSKKLQLLNSKQLAQKVTMNSLYGFCGTVNGCLPLVAI 600
Query: 634 SSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVP-TVEA----- 687
+++VT GR MI+ T + T +GG VIYGDTDSVM F P TV
Sbjct: 601 AAAVTCTGRSMIKTTADFIR---TEMGG-----TVIYGDTDSVMCTFPAPQTVRGQGKRA 652
Query: 688 ----AMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTK 743
A +G A + F P+KLE+EK+Y+P+LLISKKRYA + + P+ KM T
Sbjct: 653 LLGHAYAMGLSAEEKSLSLFGHPVKLEYEKIYFPFLLISKKRYACMSYDRPDSEPKMSTS 712
Query: 744 GIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL 803
G+ TVRRDN +V++ + ++ R V+YVK+ +S L + + + L I+ L
Sbjct: 713 GLVTVRRDNAKVVRDCANGVISILMEGRGQGDVVEYVKTVLSKLENSEIGVEDLTISNEL 772
Query: 804 TKTGDDYEVKAAHVELAERMRKR 826
K D Y +AH LA ++ R
Sbjct: 773 KKHPDQYATPSAHSVLAGKLNAR 795
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 831 APNVGDRVPYVIIKAAKGAKAYERSEDPIYV-LENNIPIDTHYYLENQISKPLLRIFEPI 889
A ++G RVPYVI++ ERSEDP +V + +++ IDT YY++ Q+ P+L I E
Sbjct: 907 AQSLGSRVPYVIVRG--NGSVNERSEDPRFVEMADHLRIDTKYYIDQQLKNPILGIVEAF 964
Query: 890 LKN-ASKELLSGDHTRSISISTPSNSGIMKFAKRQL 924
AS E + + +R + I F +R +
Sbjct: 965 PDGRASLERVFREFSRRADNANKGRREITSFFERSV 1000
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 121/299 (40%), Gaps = 41/299 (13%)
Query: 114 SGSAAI-----IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR 168
SGS++I ++IF V +G +V F P+FY+ + + F ++ +
Sbjct: 19 SGSSSIRDTTLVQIFAVAEDGRPTYVQVKNFRPWFYVDLNEFF---TFAQFKSVVAEQYW 75
Query: 169 EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLD 227
N V E+V ++ + + KS + L L M S + + + L
Sbjct: 76 ARN--------VVSCELVARKRFIGFADGKSFDYVLMTFTGLIPMYCSRKYLRTLKVHL- 126
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDI 287
+E +V L+F I ++ E+ G + ++C E+ Y +
Sbjct: 127 ---------HEDSVDPLLKFFHSSGIKPSSYFEMD-GFVVWNGQGKTHCSREY---YVAV 173
Query: 288 ISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGE---KQPFIR 344
+ P + P + S+DIE +G +P D V QV+ GE + I
Sbjct: 174 QNLRPSADSGSPPPIPMCSYDIESSGL-----DPASDYVFQVSLCFGFLGEDLDSRSAIS 228
Query: 345 N--VMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ V+ + + G ++ + E +L +R+ + E +++GYN +FD +L ++
Sbjct: 229 DSFVICVGDVESVEGTPILCVQNELQLLKKFREIVVERQVCILVGYNSYQFDGQFLYKR 287
>gi|57865333|gb|AAW57296.1| DNA polymerase [Murid herpesvirus 2]
Length = 758
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 290/579 (50%), Gaps = 80/579 (13%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KED+ + I E R R+ YC++DA L + L + + F + +AR+ + +
Sbjct: 178 KKEDLSYKEIPKQFVAGDEGRARVGKYCVQDAVLVRDLFNVIAFHYEAAAIARLARISMR 237
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV---------------KQAGSEQGTYEGATVL 504
++ GQ I++ + LL + + LV+PN+ + + S Y+GATVL
Sbjct: 238 KVIFDGQQIRIYTCLLEECAARGLVLPNLPSNKDSGPRDEEMDDEDSNSRSVGYQGATVL 297
Query: 505 EARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPEDARK--LNLPPECVNKTPS 559
E GF+ P+ DFASLYPSIMM+ NLCYSTL+ +PE +R L +P +
Sbjct: 298 EPECGFHHAPVMVFDFASLYPSIMMSNNLCYSTLIVEGSPEVSRDDVLEVP------MSN 351
Query: 560 GETF--VKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSV 617
GETF VK ++Q IL E+L L RK + +K D ++K +D +QLALKI+ N+
Sbjct: 352 GETFKFVKQHVQGSILAELLVRWLTQRKLVREAMKTCDDEMQKMFMDKQQLALKITCNAF 411
Query: 618 YGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLV------EDKFTTVGGYEHNA----- 666
YGFTG G LPC+ I+SS+T GR M+ T + + D T V G+ A
Sbjct: 412 YGFTGVAAGMLPCLPIASSITKIGRDMLVSTSEYMVKNCNDVDFLTKVIGFPMEAIDPQA 471
Query: 667 ---EVIYGDTDSVMVQF-GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLIS 722
++IYGDTDSV F G+ K G AA+ F P+KLEFEK++ ++I
Sbjct: 472 LSVKIIYGDTDSVFGLFLGLDRDVLLKKAGDIAANITRALFKDPVKLEFEKMFISLMMIC 531
Query: 723 KKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP-GAVQYV 780
KKRY G +Y T DK+ KG++ VRR C VK +V + L+ + D + GA++
Sbjct: 532 KKRYIGKVYGT-----DKLCMKGVDLVRRTACPFVKTVVKDVLNMVFNDETVSEGAMKLS 586
Query: 781 KSTI-----------------------SDLLMNRMDLSLLVITKGLTKTGDDYEVK-AAH 816
+ DL +NR+ +S L ++ L++ Y+ K H
Sbjct: 587 SMSFDTLRKDGVPYEFGAVIRRLCQARDDLHLNRVPVSELTLSSVLSQHVSCYKQKNLPH 646
Query: 817 VELAERMRKRDAATAPNVGDRVPYVI---IKAAKGAKAYERSEDPIYVLENNIPIDTHYY 873
+ + R+ R P++G+RV YV+ +A K YE +EDP YV+E +PI+ Y
Sbjct: 647 LAVIRRLAARQEEL-PSIGERVLYVLTMPTEAKKNVPNYEIAEDPKYVMEEKLPINAGKY 705
Query: 874 LENQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTP 911
+Q+ K + P+ K+ K +H + I P
Sbjct: 706 F-DQVIKAVTNTLMPVFPKDMPKREKFFNHILPVRIYLP 743
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 307 FDIECAGRKGHFP--EPTHDPVIQVANLVTLQGEKQP-FI---RNVMTLKSCAPIVGVDV 360
FDIEC G FP E D VIQ++ + + GEK +I +++ T+ CAPI GV V
Sbjct: 1 FDIECMSASGAFPSAENVDDIVIQISGVCHIIGEKPARWIVPEKHLFTIGPCAPIPGVQV 60
Query: 361 MSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+F +E ++L+ + F++ P+ + GYNI FD+ Y++ +
Sbjct: 61 YTFPSEFEMLIGFMQFLKLFSPEFLTGYNINGFDIKYVLHR 101
>gi|378734453|gb|EHY60912.1| DNA polymerase zeta subunit [Exophiala dermatitidis NIH/UT8656]
Length = 1773
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 182/627 (29%), Positives = 297/627 (47%), Gaps = 69/627 (11%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN--LVIPNVKQAGSE 494
+LD + E AR+ GV ++SRG KV S + R AK +N LV P+ +Q G +
Sbjct: 1143 ILDANELVPRTSEQARLLGVDWFSVISRGSQFKVESLMFRIAKPENFILVSPSRRQVGGQ 1202
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTP------------- 541
V+E R+ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1203 NALECLPLVMEPRSDFYTSPLLVLDFQSLYPSVMIAYNYCYSTFLGRVVSWRGTNKMGFT 1262
Query: 542 ---EDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPL 598
+ R L L E +N P+G + K +++K +L ++L E+L R K+ +K KD
Sbjct: 1263 DYRREPRLLELLKEHINIAPNGIMYAKPHIRKSLLAKMLSEILETRVMVKSGMKVDKDDK 1322
Query: 599 E-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE--D 654
+ +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+ +E L+ D
Sbjct: 1323 TLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTGRETLEKAIALIHSVD 1382
Query: 655 KFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKV 714
++ AEV+YGDTDS+ V T + A +G E A ++ +P+KL+FEKV
Sbjct: 1383 RW--------GAEVVYGDTDSLFVYLKGRTRDQAFDIGEEIAAAVTNMNPRPVKLKFEKV 1434
Query: 715 YYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
Y+P +L++KKRY G Y + + D KGIETVRRD + + L + D+
Sbjct: 1435 YHPCVLLAKKRYVGFKYESRNQTVPDFDAKGIETVRRDGTPAEQKIEETALKLLFRTADL 1494
Query: 774 PGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAP 832
++ ++ + ++ + + + + T D ++ R +D P
Sbjct: 1495 SQVKRFFQAQCAKIMRGNVSIQDFCFAREVKLGTYSDKGPPPPGALISARRMMQDPRLEP 1554
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILK 891
G+RVPYV++ GA+ +R P +L + + +D YY+ I PL RIF +
Sbjct: 1555 QYGERVPYVVVTGGPGARLIDRCVAPEVLLNDPHAELDAEYYISKNIIPPLERIFNLVGA 1614
Query: 892 NASK---ELLSGDHTRSISISTPSNSGIMKFAKR--------QLSCIGCKALISNGTLCS 940
N + E+ R + G++ KR +C+ C+ L+ T +
Sbjct: 1615 NVRQWYDEMPKYQRIRRV-------EGVVDNQKRVTLESYLKSSTCLVCRELLDGETRAN 1667
Query: 941 H-----------------CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDV 982
C+ + +++ + E +L C+ C G + +++V
Sbjct: 1668 TSAPAATSSSSLGLLCSTCRRNSSNSILTLRARLVQTERKVVQLAKACRSCSGLAWNEEV 1727
Query: 983 LCTSRDCPIFYRRKKAQKDMAEAKLQL 1009
C S+DCP+FY R + +A + QL
Sbjct: 1728 KCDSKDCPVFYSRTRQNVALANEQAQL 1754
Score = 47.0 bits (110), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 82/220 (37%), Gaps = 63/220 (28%)
Query: 118 AIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI-----------------SHFH 160
++IR+FG T G V +HG Y YI + +D+ S+
Sbjct: 44 SVIRVFGATETGQKVLMHIHGALQYTYIEYSGSLVREDVDVAIRTLQLSIDHALAVSYRK 103
Query: 161 QILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGI 219
I EG+ R +V HI +V + I +Y F LKI + P + +
Sbjct: 104 NIYEGKHR----------YVAHISLV--KGIPFYGFHVGYRFYLKIYLLNPLHMTRLADL 151
Query: 220 LDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV-------PVGKYRKTAKT 272
L G + + +ES++ + ++M D N+ G +IE PV +Y +
Sbjct: 152 LREG----AVMKRVLQPHESHLQYLAQWMCDYNLYGCGYIECEKFKFRGPVPRYHEMNSL 207
Query: 273 L----------------------SYCQLEFDCLYSDIISR 290
L S+C LE D DI++R
Sbjct: 208 LHQWHDHSIPPEFVSDEAALPKQSHCALEVDVHVKDILNR 247
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSI- 408
K V DV ETE D L D +R DPD++ GY + YLIE+ V + +
Sbjct: 979 KRIGRTVPYDVEEEETELDALTRLVDIVRHYDPDILTGYEVHNSSWGYLIERARVKYDLN 1038
Query: 409 -ISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTG 455
+L A++ R D + FN+ RVTG
Sbjct: 1039 YCDELSRMKAQSHGRFG-------------RDDDRWGFNHTSTIRVTG 1073
>gi|343963240|gb|AEM72540.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 943
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 241/457 (52%), Gaps = 53/457 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + + R + YC+ D+ L +L KL+F + + R++ + ++
Sbjct: 494 KKHSVSYKQIPVLFRRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIVRLSNISMN 553
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L A+++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 554 KVIFDGQQSRIFTCMLAAARREGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 611
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T D L + T +G FVK +++K IL ++L
Sbjct: 612 FASLYPSIIQAYNLCYCTLITDNDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLL 671
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KDPL + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 672 TSWLAERKAVREKLKHCKDPLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 731
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V +V+YGDTDSV V +
Sbjct: 732 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVL--L 789
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 790 CGIEDADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 845
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 846 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 905
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDYE 811
L NR+D+ L ++ LT+ D Y+
Sbjct: 906 KLVALITDARERLYENRVDIHELQLSATLTQACDKYK 942
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 152/336 (45%), Gaps = 39/336 (11%)
Query: 104 DSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D + E LP S + AII + G T +G VC VHG YFY++ D
Sbjct: 139 DVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATRDA-- 196
Query: 159 FHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM-VASCR 217
+++ +E++ S V ++ V K S+M + S P+L + + + + R
Sbjct: 197 VSKVMSNLEKESSSCSYV------VKPVNKMSLMGFNTNTS-PYLMMSFSNHFVGKEAAR 249
Query: 218 GILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQ 277
+ D LD F +E V RF++D W + R+T+K S C+
Sbjct: 250 NLKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD-SNCE 298
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQVANLV 333
LE DC D+ E+ ++ ++FDIEC FP+ T+ D +IQ++ V
Sbjct: 299 LELDCCVGDLQVIRDRVEWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS-CV 354
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
+ +++ TL SCA I GV + +E +++ ++ F+R P+ + GYNI F
Sbjct: 355 CFDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAF 414
Query: 394 DLPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
D+PY+I + + ++Q G +R + C K
Sbjct: 415 DIPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 445
>gi|343963252|gb|AEM72548.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 946
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 241/457 (52%), Gaps = 53/457 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + + R + YC+ D+ L +L KL+F + +AR++ + ++
Sbjct: 494 KKHSVPYKQIPVLFRRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMN 553
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L A+++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 554 KVIFDGQQSRIFTCMLAAARREVLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 611
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T D L + T +G FVK +++K IL ++L
Sbjct: 612 FASLYPSIIQAYNLCYCTLITDNDVASLREEDVTMVTTNTGRVHRFVKPHVRKSILSQLL 671
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KDPL + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 672 TSWLAERKAVREKLKHCKDPLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 731
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V +V+YGDTDSV V
Sbjct: 732 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVLLC- 790
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 791 -GIEDADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 845
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 846 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 905
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDYE 811
L NR+D+ L ++ LT+ D Y+
Sbjct: 906 KLVALITDARERLYENRVDIHELQLSATLTQACDKYK 942
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 152/336 (45%), Gaps = 39/336 (11%)
Query: 104 DSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D + E LP S + AII + G T +G VC VHG YFY++ D
Sbjct: 139 DVSYEYLPWRYKRFLSPTGAIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATRDA-- 196
Query: 159 FHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM-VASCR 217
+++ +E++ S V ++ V K S+M + S P+L + + + + R
Sbjct: 197 VSKVMSNLEKESSSCSYV------VKPVNKMSLMGFNTNTS-PYLMMSFSNHFVGKEAAR 249
Query: 218 GILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQ 277
+ D LD F +E V RF++D W + R+T+K S C+
Sbjct: 250 NLKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD-SNCE 298
Query: 278 LEFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQVANLV 333
LE DC D+ E+ ++ ++FDIEC FP+ T+ D +IQ++ V
Sbjct: 299 LELDCCVGDLQVLRDRVEWPN---YKCMAFDIECLSGSVDDAFPDATNPDDIIIQIS-CV 354
Query: 334 TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKF 393
+ +++ TL SCA I GV + +E +++ ++ F+R P+ + GYNI F
Sbjct: 355 CFDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAF 414
Query: 394 DLPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
D+PY+I + + ++Q G +R + C K
Sbjct: 415 DIPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 445
>gi|350412206|ref|XP_003489571.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Bombus
impatiens]
Length = 2056
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 194/606 (32%), Positives = 295/606 (48%), Gaps = 52/606 (8%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
R+L L I E AR+ G+ + SRG +V S +LR AK N V P+++Q
Sbjct: 1455 RILIHLDIIGRTCEHARLFGIQFYEVFSRGSQFRVESMMLRLAKPLNYISVSPSIQQRAR 1514
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPED---------- 543
+ ++E ++ Y P+ LDF SLYPSI++AYN C+ST + +
Sbjct: 1515 MRAPESLPLIMEPQSTLYTDPLIVLDFQSLYPSIIIAYNYCFSTCLGRVEHIGHYEPYEF 1574
Query: 544 -ARKLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLK--- 592
A L + + +N P G FVK ++ GILP +L E+L R K +K
Sbjct: 1575 GATTLKIKKDTAKKLFGKINFAPCGVAFVKPEIRMGILPRMLTEILNTRLMVKKSMKLHG 1634
Query: 593 EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKL 651
L++ +L +QL LK+ AN YG+T A G++PCIEI SV S GR+ +E K+
Sbjct: 1635 NENHALQR-ILHSQQLGLKLIANVTYGYTAANFSGRMPCIEIGDSVVSKGRETLERAIKI 1693
Query: 652 VEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEF 711
VE T G AEV+YGDTDS+ + + E A +G E AD ++ P+KL+F
Sbjct: 1694 VES--TPKWG----AEVVYGDTDSLFILLRRKSKEEAFSIGAEIADTVTAANPPPVKLKF 1747
Query: 712 EKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
EKV P +L +KKRY G + +PE+ + + KGIETVRRD C V ++ + L KIL D
Sbjct: 1748 EKVLQPSILQTKKRYCGYMYESPEQKEPEYLAKGIETVRRDGCPAVTKILEKTL-KILFD 1806
Query: 771 -RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRD 827
+D+ QYV +L R+ + L K + + Y++ A +EL R+ ++D
Sbjct: 1807 TKDLSLVKQYVTRQFDKILRKRISIQDLTFAKEF-RGLNGYKISACVPALELTRRLMRKD 1865
Query: 828 AATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYV-LENNIPIDTHYYLENQISKPLLRIF 886
P G+RV Y+I+ A + P V L+ ++ ++ YY+ I PL R
Sbjct: 1866 PRAIPRTGERVRYIIVAGAPNQPLIQCVRTPTEVILDESLSPNSIYYITKVIIPPLNRCL 1925
Query: 887 EPILKNASKELLSGDHTRSISISTPSN-----SGIMKFAKRQLSCIGCKALISNGT---L 938
+ +A+ +T I TP + K RQ A+ N T +
Sbjct: 1926 NLVSVDANTW-----YTEMIHRQTPDKIVNLCANNQKLTIRQFFNTVICAVCENQTQKDI 1980
Query: 939 CSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKA 998
C +C + ++ +++ LE L CQ C G L D C S DCP+ YR +A
Sbjct: 1981 CMNCMSKPSQTITILHEKLRWLERTHHELTMICQSCTGYL-DDPKCESLDCPVLYRLMQA 2039
Query: 999 QKDMAE 1004
++D+ +
Sbjct: 2040 RRDLVQ 2045
Score = 66.6 bits (161), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS--KV 176
+IRIFG T G C +HG PY YI C D+++ + L + A S
Sbjct: 37 VIRIFGSTPSGTKTCLHIHGVFPYMYIPCTIN---DNVNSYMYKLAAAIDSAINVSLGSA 93
Query: 177 PQFVRHIEMVQKRSIM--YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
+H+ +Q+ S + Y +K FLKI P M+ +L G+ + +S
Sbjct: 94 ISNTQHVYKIQQVSGIPFYGYHEKEHLFLKIYFYNPAMIKRAADLLQNGV----IFGQSL 149
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT 272
+E+++ F L+FMID N+ G + I + K+R+ T
Sbjct: 150 QPHEAHIPFILQFMIDYNLYGMSLINLKDVKFRQCIHT 187
>gi|343963261|gb|AEM72554.1| U38 [Elephant endotheliotropic herpesvirus 1B]
Length = 938
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 241/457 (52%), Gaps = 53/457 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K V + I L + + R + YC+ D+ L +L KL+F + +AR++ + I+
Sbjct: 488 KKHSVSYKQIPVLFRRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISIN 547
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
++ GQ ++ + +L AK++ L+IP++ +AG + TY+GATVLE + GFY P+A D
Sbjct: 548 KVVFDGQQSRIFTCMLAAAKREGLIIPSIDEAGED--TYQGATVLEPKTGFYNTPVAVFD 605
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--FVKSNLQKGILPEIL 577
FASLYPSI+ AYNLCY TL+T L + T +G FVK +++K IL ++L
Sbjct: 606 FASLYPSIIQAYNLCYCTLITDNYVASLREEDITMVTTNTGRVHRFVKPHVRKSILSQLL 665
Query: 578 EELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSV 637
LA RK + LK KDPL + +LD +QLALK++ N+VYGFTG + G PC+ I+ SV
Sbjct: 666 TSWLAERKAVREKLKHCKDPLMQILLDKQQLALKLTCNAVYGFTGVSKGMFPCLAIAESV 725
Query: 638 TSYGRQMIEHTKKLVEDKFTT---------------VGGYEHNAEVIYGDTDSVMVQFGV 682
T+ GRQ++ TK+ + D+F V +V+YGDTDSV V +
Sbjct: 726 TAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVDCPVDSNRFKIDVVYGDTDSVFVL--L 783
Query: 683 PTVEAAMKLGREAADYISGT----FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+E A +L ++++ F PIKLE +KV+ LL+ KKRY G+ +
Sbjct: 784 CGIENADRLYSALPNFVAHITKTLFPPPIKLEVDKVFEKLLLLCKKRYVGVLHGE----E 839
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------ 786
K+ KGI+ VRR+ C VKN + + D I AVQ + D
Sbjct: 840 KLSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVISEAVQKMSGMTQDQVCKEGLPPGFF 899
Query: 787 ------------LLMNRMDLSLLVITKGLTKTGDDYE 811
L NR+D+ L ++ LT+ D Y+
Sbjct: 900 KLVALITDARERLYENRVDIHELQLSATLTQACDKYK 936
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 147/335 (43%), Gaps = 37/335 (11%)
Query: 104 DSNRELLP-----LSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
D + E LP S + II + G T +G VC VHG YFY++ D
Sbjct: 133 DVSYEYLPWRYKRFLSPTGTIISLIGKTEDGTDVCVNVHGQAYYFYVAMKDEAATRDA-- 190
Query: 159 FHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRG 218
+++ +E++ S V ++ V K S+M + S + I + R
Sbjct: 191 VSKVMSNLEKESSSCSYV------MKSVNKMSLMGFNTNTSSYLMMIFSNHFVGKEAARN 244
Query: 219 ILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQL 278
+ D LD F +E V RF++D W + R+T+K S C+L
Sbjct: 245 LKD----LD------FEIFEHLVEPNTRFLVDNEFCSFGWYSLKTPYVRQTSKD-SNCEL 293
Query: 279 EFDCLYSDIISRHPEGEFSKMAPFRILSFDIEC--AGRKGHFPEPTH--DPVIQVANLVT 334
E DC D+ ++ ++ +SFDIEC FP+ T+ D +IQ++ V
Sbjct: 294 ELDCCVGDLQVLRDRVDWPN---YKCMSFDIECLSGSVDDAFPDATNPDDIIIQIS-CVC 349
Query: 335 LQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFD 394
+ +++ TL SCA I GV + +E +++ ++ F+R P+ + GYNI FD
Sbjct: 350 FDIKNTIETQHLFTLGSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAFD 409
Query: 395 LPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLK 429
+PY+I + + ++Q G +R + C K
Sbjct: 410 IPYVIGRCRYY-----NIQCGAFTKMKRGRMTCFK 439
>gi|384253877|gb|EIE27351.1| DNA polymerase zeta [Coccomyxa subellipsoidea C-169]
Length = 778
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 188/650 (28%), Positives = 308/650 (47%), Gaps = 59/650 (9%)
Query: 412 LQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVL 471
Q G R R Y ++ A L ++++L EMAR G+ +L+RG +V
Sbjct: 130 FQGGPGGGRWRCVQYIVRRARLSLAMMEQLDITGRTGEMARTFGIDFFSVLTRGSQYRVE 189
Query: 472 SQLLRKAKQKNLVIP--NVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMM 529
+ + R A +N ++P + +Q ++ V+E + Y P+ LDF SLYPS ++
Sbjct: 190 AMMARLAHTQNYLLPAPSTEQTKNQPAMEAIPLVMEPESRLYVDPVVVLDFQSLYPSQII 249
Query: 530 AYNLCYSTLV----------TPE--DARKLNLP---------PECVNKTPSGETFVKSNL 568
AYNLC+ST + TP A+ LP P+ + P+G +
Sbjct: 250 AYNLCFSTCLGRPAHAAAAATPLRLGAQVFGLPKGSLSGAVAPDKLIVAPNGVAYAPPEA 309
Query: 569 QKGILPEILEELLAARKRAKADLKEAKDPLE--KAVLDGRQLALKISANSVYGFTGATV- 625
++G+LP +L E+LA R KA +K A + + +L+ RQ +LK+ AN YG+T A
Sbjct: 310 RQGVLPRLLNEILATRIMVKAAMKRAPKTAKVLQRILNARQFSLKLIANVTYGYTAAGFS 369
Query: 626 GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTV 685
G++PC E++ S+ GR+ +E+T ++VE E A V+YGDTDS+ V +
Sbjct: 370 GRMPCAELADSIVQSGRETLENTIRMVEAH------PEWRARVVYGDTDSLFVLLEGRSR 423
Query: 686 EAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKG 744
A ++G E A + P+ L+ EKVY+P +L++KKRY G + P++ + D KG
Sbjct: 424 NEAFRIGAEIAAAATAANPPPVTLKMEKVYHPCVLLTKKRYVGYMYETPKQAAPVFDAKG 483
Query: 745 IETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK--- 801
IETVRRD C V ++ L + +D+ +YV+ + +L R+ L+ V K
Sbjct: 484 IETVRRDTCSAVAKMLERSLRILFSSKDVSQVKEYVERQWTKILSGRVSLADFVFAKEVR 543
Query: 802 -GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIY 860
G + AA V A R D P G+RVPYV++ GA+ + + P
Sbjct: 544 LGTYRAAHGLVPPAAQV--ASRAMATDPRAEPRYGERVPYVVVHGEPGARLVDMAVAPHA 601
Query: 861 VLENN--IPIDTHYYLENQISKPLLRIFEPI----------LKNASKELLSGDHTRSISI 908
++E+ + + HYY+ QI L R+F + L + L ++ +
Sbjct: 602 LIESGGRLRLHAHYYIIKQIVPALERVFSLLGVDVRGWYAALPRPQRLLPQKRPAAALGL 661
Query: 909 ST-PSNSGIMKFAKRQLSCIGCKALI-SNGTLCSHCKGR---EAELYCKTVSQVQELEVL 963
S +G + C C L + +C C+G A + +++ E + L
Sbjct: 662 GGRGSAAGTIDAYYLSRHCAVCDGLTHAQRPICEECRGEPQGAAVVLSARAARLTEAQAL 721
Query: 964 FGRLWTQC---QECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
R+ QC +G+L ++C S DC +F+ RKKA + A A++ D
Sbjct: 722 LVRVCLQCGGGGGRRGTLEAGIVCDSLDCGVFFERKKATGEAAAARVLCD 771
>gi|380028350|ref|XP_003697867.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Apis florea]
Length = 1818
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 190/604 (31%), Positives = 299/604 (49%), Gaps = 48/604 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
R+L L I E AR+ G+ + SRG +V S +LR AK N V P+V+Q
Sbjct: 1208 RILIHLDIIGQTCEHARLFGIQFYEVFSRGSQFRVESMMLRLAKPLNYIPVSPSVQQRAR 1267
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV-------------- 539
+ ++E ++ FY P+ LDF SLYPSI++AYN C+ST +
Sbjct: 1268 MRAPESLPLIMEPQSAFYTDPLVVLDFQSLYPSIIIAYNYCFSTCLGRVEHIGQYEPFEF 1327
Query: 540 -TPEDARKLNLPPECVNKT---PSGETFVKSNLQKGILPEILEELLAARKRAKADLK--- 592
T K N + V K P G FVK ++ GILP +L E+L R K +K
Sbjct: 1328 GTTTLKIKKNTAQKLVGKVNFAPCGVAFVKPEIRMGILPRMLSEILNTRLMIKKSMKLYG 1387
Query: 593 EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKL 651
D L++ +L +QL LK+ AN YG+T A G++PCIEI SV S GR+ +E K+
Sbjct: 1388 NDNDTLQR-ILYSQQLGLKLIANVTYGYTAANFSGRMPCIEIGDSVVSKGRETLERAIKI 1446
Query: 652 VE--DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKL 709
VE DK+ AEV+YGDTDS+ + + + A +G E AD I+ P+KL
Sbjct: 1447 VESTDKW--------GAEVVYGDTDSLFILLRGKSRKDAFIIGTEIADTITAANPPPVKL 1498
Query: 710 EFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLHKIL 768
+FEK+ P +L +KKRY G + +PE+ + + KGIETVRRD C V ++ + L KIL
Sbjct: 1499 KFEKILQPAILQTKKRYCGYMYESPEQTNPEYLAKGIETVRRDGCPAVAKILEKTL-KIL 1557
Query: 769 VD-RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRK 825
D +D+ YV +L ++ + L K + ++Y+ A +EL R+ +
Sbjct: 1558 FDTKDLSMVKLYVTRQFDKILRQKISIQDLTFAKEF-RGLNNYKTNACVPALELTRRLMR 1616
Query: 826 RDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL-ENNIPIDTHYYLENQISKPLLR 884
+D P G+RV Y+I+ A + P+ V+ + + ++ YY+ I PL R
Sbjct: 1617 KDPRAIPRTGERVRYIIVAGAPNQPLIQCVRTPMEVISDEGLNPNSIYYITKVIIPPLNR 1676
Query: 885 IFEPI---LKNASKELLSGDHT-RSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCS 940
I + +E++ + ++I + T + ++ + C+ C + +C
Sbjct: 1677 CLNLINIDVNTWYREMIHRQTSDKTIDLCTNNQKLTIRQFFNTVVCVTCGNQ-TQKDICM 1735
Query: 941 HCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQK 1000
+C + ++ +++ LE L CQ C G L + C S DCPI YR +A++
Sbjct: 1736 NCIAKPSQTITILYEKLRWLERTHHELTMMCQSCTGYLDEPK-CESLDCPILYRLMQAKR 1794
Query: 1001 DMAE 1004
D+ +
Sbjct: 1795 DLIQ 1798
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN-SKVP 177
+IRIFG T G C VHG PY YI C D S +++ G N +
Sbjct: 37 VIRIFGSTLSGIKTCLHVHGVFPYIYIPCTVNNNVD--SFMYKLAAGIDSAINISLGSAM 94
Query: 178 QFVRHIEMVQKRS--IMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
++H+ +Q+ +Y +K F KI P MV +L G+ L+ +S
Sbjct: 95 SNIQHVYKIQQVYGIPLYGYHEKKHLFFKIYFYNPAMVKRAADLLQNGMVLN----QSLQ 150
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRK 268
+E+++ F L+FMID N+ G + I + K+R+
Sbjct: 151 PHEAHIPFILQFMIDYNLYGMSLINLKDVKFRQ 183
>gi|346320496|gb|EGX90096.1| DNA polymerase zeta catalytic subunit, putative [Cordyceps militaris
CM01]
Length = 1666
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 190/682 (27%), Positives = 315/682 (46%), Gaps = 53/682 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y + +L+ + H+S + + ++G
Sbjct: 971 TGRHMINIWRAMRGELN---LLQYTLENVAW-HLLHRRVPHYSYKTLTAWYKSGKPSDLS 1026
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
+L Y + ++L+ I E AR+ GV + SRG KV S + R AK +
Sbjct: 1027 KLLRYFQSRTKIDLQILEANELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1086
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N L+ P+ KQ G + V+E ++ Y P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1087 NFLLISPSKKQVGGQNALECLPLVMEPQSALYSSPVLVLDFQSLYPSVMIAYNYCYSTFL 1146
Query: 540 T----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
A + L + +N P+G FVK+ ++K +L ++L E+L A
Sbjct: 1147 GRIVNWCGTSKMGFTEYKRQAGLMALLKDYINIAPNGMMFVKAEIRKSLLAKMLTEILEA 1206
Query: 584 RKRAKADLKEAKD-PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +KE KD + + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1207 RVMVKSGMKEDKDDKMLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTA 1266
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + + + AEV+YGDTDS+ + T + A +G E A IS
Sbjct: 1267 RETLERSIAYIHSV------EKWGAEVVYGDTDSLFIHLKGRTKDQAFDIGNEIAQEISQ 1320
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLV 760
+P+KL+FEKVY P +L +KKRY G +Y T + D KGIETVRRD + +
Sbjct: 1321 MNPRPMKLKFEKVYLPCVLQTKKRYVGYMYETKDQAVPVFDAKGIETVRRDGTPAEQKIE 1380
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
+ L + D+ Y ++ + ++ + + + + + D A +
Sbjct: 1381 EKALRLLFETADLSQIKAYFQAQCTKIMRGAVSVQDFCFAREVRLGSYADKGPPPAGALI 1440
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
+ R DA P G+RVPYV+I A GA+ +R P +L N + +D YY+ +
Sbjct: 1441 SARKMLHDARAEPQYGERVPYVVITGAPGARLIDRCVAPEELLANPHWQLDAEYYISKNL 1500
Query: 879 SKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGC------ 929
PL R+F + ++ E+ + + ++ + C+ C
Sbjct: 1501 IPPLERLFSLVGASVRQWYDEMPKVQRIHHTAAAAGGKRSTLESYMKSTHCLVCGVKFLR 1560
Query: 930 -------KALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQD 981
A LC C+ + +++ E + L C+ C G + D
Sbjct: 1561 EAAAAAAAATPHAAALCPRCRAADTASLLALQTRLATDETKYQELLAVCRGCMGVAPLDD 1620
Query: 982 VLCTSRDCPIFYRRKKAQKDMA 1003
V C S DCP+F+ R + + +A
Sbjct: 1621 VPCDSGDCPVFWTRMRQRTKVA 1642
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF---------HQI-LEGRMR 168
+IRIFG T G VC VHG PY +I G+ D++ F H + + R
Sbjct: 42 VIRIFGSTETGQKVCVHVHGAFPYLFIEYEGGLSQDEVGSFIFKLHLSIDHALSVSFRRD 101
Query: 169 EANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDG 228
E NS+ FV I +V K Y + FLKI + P ++ +L +G L
Sbjct: 102 EQGLNSR---FVARITLV-KGVPFYGYHVGYRFFLKIYMYNPMVMTRLTDLLQQGAILK- 156
Query: 229 LGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ F YE+++ + +FMID N+ G ++++ +R
Sbjct: 157 ---QKFQPYEAHLQYLSQFMIDYNLFGCDYLDASQTAFR 192
>gi|328866324|gb|EGG14709.1| DNA polymerase zeta catalytic subunit [Dictyostelium fasciculatum]
Length = 2115
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 206/712 (28%), Positives = 326/712 (45%), Gaps = 98/712 (13%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVH--HSIISDLQNG--NAET--- 419
R VL WR E+ D N+C Y + + H H +++D + ET
Sbjct: 1397 RIVLNMWRLLRHEITLDNYSFENVCF----YALHQRYPHYSHQVLTDWYGDPKSIETIPP 1452
Query: 420 --RRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRK 477
R + + L A L+ I E ARV G+ +LSRG +V S LLR
Sbjct: 1453 PLRWKTLRHTLDRAMGSLDLIQHFDIIGRSSEFARVYGIDFFSVLSRGSQYRVESMLLRL 1512
Query: 478 AKQKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCY 535
K +N ++ P+ +Q ++ V++ Y+ P+A LDF SLYPSIM+ +N CY
Sbjct: 1513 TKPENYILYSPSREQTTNQPMPECIPLVMDPATRLYDSPVAVLDFQSLYPSIMIGHNYCY 1572
Query: 536 STL---VTP----EDARKLN--------------LPPECVNKTPSGETFVKSNLQKGILP 574
ST V P ++ ++L +N +P+G FVKS+ ++GI P
Sbjct: 1573 STCLGKVQPTSDTDNTKRLGSGSIKIQNGLVEALHANNAINVSPNGVMFVKSDTRRGIFP 1632
Query: 575 EILEELLAARKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIE 632
++L E+L R K +K+ KD +LD RQL LK+ AN YG+T AT G++ CIE
Sbjct: 1633 KLLSEVLDTRIMVKKAMKKHKDNKRIYKMLDSRQLGLKLMANVAYGYTSATYSGRMSCIE 1692
Query: 633 ISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLG 692
+ S+ R+ +E K+ E G E NA V+YGDTDS+ V T A +
Sbjct: 1693 LGDSIVQTARETLESAIKITE------TGKEFNASVVYGDTDSLFVLMPGRTRADAFGVA 1746
Query: 693 REAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD--KMDTKGIETVRR 750
++ AD ++ KP+KL FEK+Y+P +L++KKRY G + P + D KGIETVRR
Sbjct: 1747 QKIADRVTSMSPKPVKLIFEKIYHPCILVNKKRYVGYKYETPSPLEVPTFDAKGIETVRR 1806
Query: 751 DNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTK----T 806
D+C +V + L + +D+ +Y+ + I +L +R+ L + K +
Sbjct: 1807 DSCKVVSKTLERSLRILFEQKDLSAVKEYLMNQIKKILQDRVSLRDFIFGKEVRMANYVN 1866
Query: 807 GDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-N 865
++ A LA R+ ++D P G RV YV++ ++ + PI LEN
Sbjct: 1867 AENGGALPAAAHLARRLIEKDPRAEPRHGQRVSYVVVYGLPNSRLCDLVVSPIEYLENRK 1926
Query: 866 IPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQ-- 923
+ I+T YY+ QI L RIF+ L A+ L ++S + N +++F + Q
Sbjct: 1927 LRINTLYYITKQIIPALDRIFK--LVGANIPLWFNQLSKSFPFTF--NQKLLQFYQNQNN 1982
Query: 924 -----------------------LSCIGC------------KALISNGTLCSHCKGREAE 948
++C C K +I +C+ C A+
Sbjct: 1983 SNNNNNNMNNLVAQKTIDEFYNIINCFICGNNLDSPPIQQKKGMIP---VCNQCNQDGAQ 2039
Query: 949 L-YCKTVSQVQELEVLFGRLWTQCQECQGS--LHQDVLCTSRDCPIFYRRKK 997
+ ++++ +E +L+ C C G + D+ C S DC F+ R K
Sbjct: 2040 TSHFVMMNRLASIESQRNQLYEICHTCSGDNRFYSDIECQSLDCDTFFERMK 2091
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDD----------ISHFHQILEGRMR 168
I+R+FG T G C +H PYF+I + D+ ++ + + +
Sbjct: 60 IVRVFGSTPAGQKCCLHLHNLFPYFFIQYNDDLPLDNEQINIFVRKLVASINIAMVTNQK 119
Query: 169 EANRNSKVPQFVRHIEMVQKRSIM-YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
++N N+ Q + +I++ + R YY K F+KI + P + +L G
Sbjct: 120 QSNNNNNNVQHIFNIKLTKGRPFYGYYPDNKI--FIKIFLYNPDNLNKISNLLRSG---- 173
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ + F +E+++ F L+ +D N+ G ++I+ +R
Sbjct: 174 SIMGRKFEVFEAHIPFLLQVFLDYNLAGMSFIDFTRVHFR 213
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 304 ILSFDIECAGRKGHFPEPTHDPVIQVANLV------TLQGEKQPFIRNVMTLKSCAPI-- 355
+LS +I + P P DPV+ +A ++ QG+ + ++ + + +
Sbjct: 1238 LLSVEIHVNTKGTLNPNPETDPVLAIAYVIRDEGASEEQGDDYKDVTGLLVIAASSNTST 1297
Query: 356 --VGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+G + F+ ER++L A+ +R D D+++G+ + + YLIE+
Sbjct: 1298 MGLGCPIRVFQDERELLKAFVALVRSFDVDILVGFEVQYASIGYLIER 1345
>gi|357289784|gb|AET73097.1| DNA polymerase [Phaeocystis globosa virus 12T]
gi|357292583|gb|AET73919.1| DNA polymerase [Phaeocystis globosa virus 14T]
Length = 1276
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/565 (30%), Positives = 299/565 (52%), Gaps = 63/565 (11%)
Query: 389 NICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYV 448
++ K+ + + + K+DV I +L N + R + YC+ D LL K+ I + V
Sbjct: 649 DLKKYKINWGLAKDDVSVQEIFELANKSDIDRFTVGKYCIGDCDNVIWLLIKVDIITDKV 708
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARA 508
EM+ + VP++FLL RGQ IK+ S + +K +KN ++P V++ ++ G YEGA V +
Sbjct: 709 EMSNLCDVPLNFLLQRGQGIKLQSYVSKKCGEKNTLMPIVEKNLND-GGYEGAHVFNPKT 767
Query: 509 GFY-EKPIATLDFASLYPSIMMAYNLCYSTLV-------------------TPEDARKLN 548
G Y E P+A +D++SLYPS M++ NL + + V E+ N
Sbjct: 768 GLYLEDPVACVDYSSLYPSSMISENLSHDSKVWTKEYDLSDNLIHSTGEKDADENFIYDN 827
Query: 549 LPP-----------ECVNKTPSGET-----------FVKSNLQKGILPEILEELLAARKR 586
LP E + KTP F + K I+P ILE+LL+ARK
Sbjct: 828 LPNYTYVDVKYDTYEYLRKTPKAAEKKTVVGYKICRFAQFPKGKAIMPAILEDLLSARKA 887
Query: 587 AKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIE 646
K + + +DP ++ + D RQL++K++ANS+YG GA ++++S T+ GR+++
Sbjct: 888 TKKLMGKEEDPFKQNIYDKRQLSIKVTANSLYGQCGARTSAFYEKDVAASCTAIGRKLLF 947
Query: 647 HTKKLVEDKFTTV-----GGYE--HNAEVIYGDTDSVMVQFGVPTVEA-----------A 688
+ K ++E + V G + AE +YGDTDSV +F + T E
Sbjct: 948 YGKDVIEGCYNNVEITLSDGVKVVTKAECVYGDTDSVFFKFNLKTPEGKRIINKQALIYT 1007
Query: 689 MKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETV 748
++L ++A + + KP LE+EK ++P+ L+SKKRY G+ + N ++ K+ + G
Sbjct: 1008 IELAKQAGELATKFLKKPHDLEYEKTFWPFNLLSKKRYDGMLYENDPEYCKLKSMGNVLK 1067
Query: 749 RRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD 808
RRDN +VK++ + ++ D+ +P ++++VK ++ +++ + + L++TK L
Sbjct: 1068 RRDNAPIVKDIYGGVVGILMKDKSLPKSIKFVKESVQNMIDEKYPIEKLLVTKALRGYYK 1127
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKA-AKGAKAYERSEDPIYVLENNIP 867
+ + + AH LA+R+ R+ P GDR+ Y IK K A E+ E P ++ +N +
Sbjct: 1128 NPK-QIAHKVLADRIGVREQGNKPGAGDRMNYAYIKNPNKKALQGEKIETPEFIKDNELK 1186
Query: 868 IDTHYYLENQISKPLLRIFEPILKN 892
+D +Y+ NQI KPLL+++ L+N
Sbjct: 1187 LDYGHYITNQIMKPLLQLYALELEN 1211
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 23/233 (9%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
II++FG+ G +V V F P++YI G D + F ++ ++ +S V
Sbjct: 44 IIQMFGINVAGETVSLIVEDFNPFYYIKVGDDWGESDRAEFIAHIKNKLGAYYEDSIVAS 103
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVA----------LPTMVASCRGILDRGIQLDG 228
++V++ + + K F+KI + + ++ G+ R + DG
Sbjct: 104 -----KLVKRHKLYGFDDNKLHTFIKISFTNTGAYNRAKKMFYVDSTVDGVFKRELIPDG 158
Query: 229 L---GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYS 285
K ++ YE+N+ L+ I WI++ K K + ++C E+ Y
Sbjct: 159 YLYEETKCYL-YEANIPPLLKLFHIQEISPSGWIQIQSDKITKMRQKSTHCAYEYITSYK 217
Query: 286 DIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGE 338
+ + + + + I SFDIE + G FP P D N++ E
Sbjct: 218 HL----KKADKDDIVKYSICSFDIEASSSHGDFPVPIKDYKKLATNILEYYNE 266
>gi|239613873|gb|EEQ90860.1| polymerase zeta subunit [Ajellomyces dermatitidis ER-3]
Length = 1699
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 184/626 (29%), Positives = 302/626 (48%), Gaps = 49/626 (7%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y + L ++++ + E AR+ G+ + SRG KV S + R AK +N ++
Sbjct: 1065 YFVSRVQLNLKIIEANELVSRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPENFIL 1124
Query: 486 --PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE- 542
P Q G + V+E ++ FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 1125 ISPGRTQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGRVV 1184
Query: 543 -----------DARK----LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
D R+ L L + VN P+G + K +++ +L ++L E+L R
Sbjct: 1185 NWRGQNKLGFIDFRRPAGILELFKDQVNIAPNGIIYAKQEIRRSLLAKMLIEILETRVMV 1244
Query: 588 KADLK-EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K +K E D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +
Sbjct: 1245 KGGMKAEKDDKYLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETL 1304
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E L+ +V + AEV+YGDTDS+ V T E A +G E A ++ + +
Sbjct: 1305 EKAIALIH----SVERW--GAEVVYGDTDSIFVYLKGRTREEAFDIGEEIARKVTNSNPR 1358
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + +K D KGIETVRRD + + + L
Sbjct: 1359 PVKLKFEKVYHPCVLLAKKRYVGYKYESRSQKDPDFDAKGIETVRRDGTPAEQKIEEKAL 1418
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERM 823
+ D+ Y + + ++ ++ + K + T + + ++ +
Sbjct: 1419 KILFETADLSRVKSYFQKQCAKIMQGKVSIQDFCFAKEVRLGTYSERGMPPPGALISAKR 1478
Query: 824 RKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYYLENQISKPL 882
D T G+R+PYV+I A GA+ +R P +L ++ + +D YY+ + PL
Sbjct: 1479 MLEDPRTEAQYGERIPYVVISGAPGARLIDRCVSPEVLLHDSQLELDAEYYISKNLIPPL 1538
Query: 883 LRIFEPILKNASK---ELLSGDHTRSI----SISTPSNSGIMKFAK------RQLSCIGC 929
RIF + N + E+ R I S ++ + G K + SC+ C
Sbjct: 1539 ERIFNLVGANVRQWYDEMPKYQRVRRIDGGASNASANKEGFSSMKKTLESYMKLSSCVVC 1598
Query: 930 KALISNGT--LCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLC 984
+ + G +C C G + L K +E + ++ L C+ C G S +DV C
Sbjct: 1599 RDKLEEGEERICGGCLRDGHISLLQLKHSLMREERKKVY--LHKVCRSCMGVSWGEDVKC 1656
Query: 985 TSRDCPIFYRRKKAQKDMAEAKLQLD 1010
S+DCP+FY R + + + + ++
Sbjct: 1657 DSKDCPVFYTRTRQESTLMSTRAAVE 1682
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 39/206 (18%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------N 171
+IR+FG T G VC +HG PY YI + P +++ + L + A N
Sbjct: 42 VIRVFGATETGQKVCAHIHGAFPYLYIEYQGSLNPKEVNTAIRTLHLSIDHALAVSYRRN 101
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
K +V HI +V K Y + F KI + P + +L +G +
Sbjct: 102 AYEKKTAYVAHITLV-KGVPFYGYHVGYRFFFKIYLFNPMHMTRLADLLRQG----AVMK 156
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIE-------VPVGKYRKTAKTL----------- 273
+ YES++ + ++M D N+ G +++ P+ Y + + +
Sbjct: 157 RVLQPYESHLQYLSQWMCDYNLYGCAYLKSSKVTFRAPIPTYLENSTHIWHDRSIPESAV 216
Query: 274 ---------SYCQLEFDCLYSDIISR 290
S+C LE D DII+R
Sbjct: 217 FDSFTLPRQSHCDLEVDIHVQDIINR 242
>gi|354548042|emb|CCE44777.1| hypothetical protein CPAR2_405800 [Candida parapsilosis]
Length = 1698
Score = 254 bits (648), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 202/689 (29%), Positives = 336/689 (48%), Gaps = 66/689 (9%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLAVY 426
R +L WR E+ N+C L + + +H I LQ+G + + Y
Sbjct: 1025 RHILNVWRILKSEMALTSYTLENVCYHLLHRPLPRYSLHQ-ISQWLQSGRFKDIQVALSY 1083
Query: 427 CLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI- 485
+K L +++ I VE +R+ G+ + RG KV S L R +K +++++
Sbjct: 1084 YMKRIELTLKIISVQELITRNVEHSRLIGIEFNSNFYRGSQYKVESILSRISKSESILLN 1143
Query: 486 -PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV----- 539
P+ Q + +LE ++ FY+ P+ LDF SLYPSIM+AYN CYSTL+
Sbjct: 1144 SPSKVQVHEMRPIECIPLILEPKSNFYKSPLVVLDFQSLYPSIMIAYNYCYSTLIGKLHN 1203
Query: 540 -TPEDA-----RKLNLPP---------ECVNKTPSGETFVKSNLQKGILPEILEELLAAR 584
P+ + LNLPP + VN +P+G FVKS+++K IL ++LEE+L R
Sbjct: 1204 FKPKKNNIGYLKNLNLPPGIVDLLMEDDAVNISPNGFAFVKSHVRKSILAKMLEEILNIR 1263
Query: 585 KRAKADLKEAKDPLEKAVL-DGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGR 642
+ K+ +K KD E L + RQ+ALK+ AN YG+T AT G++P +I+ ++ S GR
Sbjct: 1264 LKTKSVMKLFKDDTELTKLYNARQIALKLIANVTYGYTSATFSGRMPNSDIADAIVSTGR 1323
Query: 643 QMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT 702
++++ + +++E GGY A+V+YGDTDS+ V F + A K GRE A ++
Sbjct: 1324 EVLDKSIEMIE-----AGGY--GAKVVYGDTDSLFVYFPGKSKAEAFKSGREIAKVVTKF 1376
Query: 703 FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEK-FDKMDTKGIETVRRDNCLLVKNLVT 761
F PI+L+FEKV++P +L++KKRY G + ++ K D KGIETVRRD + +
Sbjct: 1377 FPDPIQLKFEKVHHPCVLLAKKRYVGYSFEYEDQVVPKFDAKGIETVRRDGIPAQQKITE 1436
Query: 762 ECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD--DYEVKAAHVEL 819
+ L + +D+ QY + N++ ++ K + K G+ D L
Sbjct: 1437 KALRILFETKDLSKVKQYTLKQFLKIFNNKIAINDFCFAKEV-KYGNYKDERYLPPGALL 1495
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYER---SEDPIYVLENNIP--IDTHYYL 874
A + + D P +R+PYV+ + + + +R ED I P +D YY+
Sbjct: 1496 ASKAVEDDPRKEPQYKERIPYVVTRDSTKIRIKDRVMFPEDFIKTFSTVEPLMLDYEYYI 1555
Query: 875 ENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKA 931
+ PL RIF + ++ +EL TRS IS S+ SC+ C +
Sbjct: 1556 TRVLIPPLERIFNLMGADVRGWYREL--PKFTRSNIISAFSD-----------SCLICGS 1602
Query: 932 -LISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVL------- 983
L +CS C E +L ++++ + C+ C ++ + +
Sbjct: 1603 RLDGREYVCSKCSLDEQQLVANVAMTCKKMQQKIIEIENTCRNCSQNVFESGVSVSQYTY 1662
Query: 984 -CTSRDCPIFYRRKKAQKDMAEAKLQLDR 1011
C +RDC ++Y + K ++ + ++ D+
Sbjct: 1663 NCINRDCSVYYNKVKVGQEAKQLFIRNDK 1691
>gi|383864467|ref|XP_003707700.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Megachile
rotundata]
Length = 1647
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 197/604 (32%), Positives = 299/604 (49%), Gaps = 46/604 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
R+L L I E AR+ G+ + SRG +V S +LR AK N V P+++Q +
Sbjct: 1036 RILIHLDIIGKTCEHARLIGIQFYEIFSRGSQFRVESMMLRLAKPLNYIAVSPSIQQKAN 1095
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC 553
+ ++E ++ FY P+ LDF SLYPSI++AYN C+ST + + LN P E
Sbjct: 1096 MRAPQALPLIMEPQSIFYTDPLIVLDFQSLYPSIIIAYNYCFSTCLGRVEHIGLNEPFEF 1155
Query: 554 ------------------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLK--- 592
+N +P G FVK ++ GILP +L E+L R KA +K
Sbjct: 1156 GATTLRIKKSTVTKLQGKINFSPCGVAFVKPEVRLGILPRMLTEILNTRLMVKASMKLHG 1215
Query: 593 EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKL 651
L++ VL +QL LK+ AN YG+T A G++PCIEI SV S GR+ +E K+
Sbjct: 1216 NENQALQR-VLHSQQLGLKLIANVTYGYTAANFSGRMPCIEIGDSVVSKGRETLERAIKI 1274
Query: 652 VEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEF 711
VE T G A+V+YGDTDS+ + + E A +G E AD ++ P+KL+F
Sbjct: 1275 VES--TPKWG----AQVVYGDTDSLFILLPGRSREDAFDIGAEIADTVTAANPPPVKLKF 1328
Query: 712 EKVYYPYLLISKKRYAGLYWTNPEKFDKMD--TKGIETVRRDNCLLVKNLVTECLHKILV 769
EKV P +L +KKRY G + E+ DK + KGIETVRRD C V ++ + L KIL
Sbjct: 1329 EKVLQPSILQTKKRYCGYMYEYLEQ-DKPEYLAKGIETVRRDGCPAVAKILEKSL-KILF 1386
Query: 770 D-RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKR 826
D +DI YV +L ++ + L K + Y+ A +EL R+ ++
Sbjct: 1387 DTKDISLVKLYVTRQFDKILRQKISIQDLTFAKEF-RGLRGYKTSACVPALELTRRLMRK 1445
Query: 827 DAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYV-LENNIPIDTHYYLENQISKPLLRI 885
D P G+RV YVI+ A + P+ V L+ + ++ YY+ I PL R
Sbjct: 1446 DPRAIPRTGERVRYVIVAGAPNQPLIQCVRTPMEVILDEGLSPNSIYYITKVIIPPLNRC 1505
Query: 886 FE--PILKNASKELLSGDHT--RSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSH 941
F I NA +S T +++S+ T + +K + C C + +C++
Sbjct: 1506 FNLFGIDVNAWYREMSHRQTPDKAVSLFTDNQKLTIKQFFGTIVCAVCGDQ-TQKDICTN 1564
Query: 942 CKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKD 1001
C + + +++ LE + L T CQ C G + C S DCP+ YR ++++D
Sbjct: 1565 CIEKPYQAVTILHEKIRWLERTYHELNTICQSCVGCTDEPE-CESLDCPVLYRLAQSRRD 1623
Query: 1002 MAEA 1005
+ +
Sbjct: 1624 LVKV 1627
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
++RIFG T G C +HG PY YI C + +++ F L + ++ N +
Sbjct: 37 VVRIFGSTPSGTKTCLHIHGVFPYIYIPC---IINNNVDSFMYKLAAAI-DSGINVSLGS 92
Query: 179 FV---RHIEMVQKRS--IMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
V +H+ +Q+ S +Y +K F KI P M+ +L G L+ +S
Sbjct: 93 AVSNTQHVYKIQRISGIPLYGYHEKEHLFFKIYFYNPAMIKRAADLLQNGTILN----QS 148
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLS 274
F +E+++ F L+FMID N+ G + I + K+R + T S
Sbjct: 149 FQPHEAHIPFILQFMIDYNLYGMSLINLKHVKFRHSMHTES 189
>gi|310794043|gb|EFQ29504.1| DNA polymerase family B [Glomerella graminicola M1.001]
Length = 1722
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 189/637 (29%), Positives = 305/637 (47%), Gaps = 44/637 (6%)
Query: 397 YLIEKEDVHHSIISDLQNGNAETRR---RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARV 453
+++ + H+S + + N+ +R +L Y L ++L+ I E AR+
Sbjct: 1064 HVLHRRMPHYSWKTLTEWYNSSKQRDLDKLLRYYLGRTKTDIQILESNELIPRTSEQARL 1123
Query: 454 TGVPISFLLSRGQSIKVLSQLLRKAKQKN--LVIPNVKQAGSEQGTYEGATVLEARAGFY 511
GV + SRG KV S + R AK +N LV P+ KQ G + V+E ++ FY
Sbjct: 1124 LGVDFFSVFSRGSQFKVESIMFRIAKPENFMLVSPSRKQVGGQNALECLPLVMEPQSDFY 1183
Query: 512 EKPIATLDFASLYPSIMMAYNLCYSTLVT----------------PEDARKLNLPPECVN 555
P+ LDF SLYPS+M+AYNLCYST + R L L + +N
Sbjct: 1184 NSPLLVLDFQSLYPSVMIAYNLCYSTFLGRIVNWRGMNKMGFTEYQRHRRLLELLKDHIN 1243
Query: 556 KTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLDGRQLALKISA 614
TP+G FV+ ++K +L ++L E+L R K+ +K+ KD + +L+ RQLALK+ A
Sbjct: 1244 ITPNGMMFVRPEIRKSLLAKMLGEILETRVMVKSGMKQDKDDKTLQQLLNNRQLALKLLA 1303
Query: 615 NSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLV--EDKFTTVGGYEHNAEVIYG 671
N YG+T A+ G++PC EI+ S+ GR+ +E + +D++ AEV+YG
Sbjct: 1304 NVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAYIHSQDRW--------GAEVVYG 1355
Query: 672 DTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYW 731
DTDS+ V T + A +G E I+ +PIKL+FEKVY+P +L++KKRY G +
Sbjct: 1356 DTDSLFVYLKGRTKDQAFDIGEEIVKAITDMNPRPIKLKFEKVYHPCVLLAKKRYVGYKY 1415
Query: 732 TNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMN 790
+ ++ D KGIETVRRD + + + L + ++ Y + ++
Sbjct: 1416 ESRDQVKPDFDAKGIETVRRDGTPAEQKIEEKALRILFETANLSEVKSYFQKQCEKIMRG 1475
Query: 791 RMDLSLLVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGA 849
+ + + + T D ++ + DA P G+RVPYV+I A GA
Sbjct: 1476 SVSVQDFCYAREVKLGTYSDKGPPPPGALISTKKMLEDARAEPQYGERVPYVVITGAPGA 1535
Query: 850 KAYERSEDPIYVL-ENNIPIDTHYYLENQISKPLLRIFEPILKNASK---ELLSGDHTRS 905
+ +R P +L +++ +D YY+ + PL RIF + N + E+ R
Sbjct: 1536 RLIDRCVAPEDLLKDSHSQLDAEYYISKNLIPPLERIFNLVGVNVRQWYDEMPKVQRIRR 1595
Query: 906 ISISTPS---NSGIMKFAKRQLSCIGCKALIS-NGTLCSHCKGREAELYCKTVSQVQELE 961
I + N ++ SCI C + G +CS C+ ++ + E
Sbjct: 1596 IDQTLGRGGLNKKTLESYLNSASCISCNVKMQVEGVMCSKCQHDVPSSLYHLQMRLHQEE 1655
Query: 962 VLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKK 997
+ + C+ C ++V C S+DCP+FY R K
Sbjct: 1656 RKYIDVVRICRSCSAMPAVEEVPCDSKDCPVFYSRVK 1692
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 41/209 (19%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF----HQILEGRMREANRNS 174
++R+FG T G VC +HG PY Y+ + P+++ + H ++ + + R
Sbjct: 42 VVRVFGSTETGQKVCAHIHGAFPYLYVEYQGSLEPEEVGAYIYRLHLSIDHALAVSYRRD 101
Query: 175 KV---PQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
+ +FV I +V K Y + FLKI + P ++ +L +G+ L
Sbjct: 102 QYGENAKFVARITLV-KGVPFYGFHVGYRFFLKIYMFNPIVMTRLADLLQQGVILK---- 156
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEV-------PVGKYRKTAKT------------ 272
+ F YE+++ + L+FM D N+ G +++V PV + + +
Sbjct: 157 RKFQPYEAHLQYLLQFMTDYNLYGCGYLDVSDVYFRAPVPSFEEEGNSEHIWHDRTIPPT 216
Query: 273 ----------LSYCQLEFDCLYSDIISRH 291
+S+C +E D +I++RH
Sbjct: 217 RVLNDPSLPRISHCSVEVDICVQNIMNRH 245
>gi|390604346|gb|EIN13737.1| hypothetical protein PUNSTDRAFT_117429 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1767
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 188/618 (30%), Positives = 288/618 (46%), Gaps = 46/618 (7%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
RL Y A L +LLD + E ARV GV ++SRG KV S + R AK +
Sbjct: 1127 RLLRYLSDRAALNLQLLDATEVVTKTAEFARVHGVEFYSVISRGSQYKVESFVSRIAKPE 1186
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
+ V+ P+ + G + V+E + FY P+ LDF SLYPS+M+AYN Y T +
Sbjct: 1187 SYVMLSPSKEDVGRQNAAEAMPLVMEPLSSFYTSPVLVLDFQSLYPSVMIAYNFSYDTCL 1246
Query: 540 ---TPEDARK------LNLPP-------ECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
P + L LPP + VN P+G +VK +++KG+L +L ELL
Sbjct: 1247 GRSVPFKGQNKFGVTDLQLPPGLLERLKDDVNVAPNGMIYVKQHVRKGLLGRMLAELLNT 1306
Query: 584 RKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K +K K D +L+ RQL LK AN YG+T AT G++P +EI+ S+ G
Sbjct: 1307 RVMVKQAMKGVKSDKALTRILNARQLGLKFIANVTYGYTSATYSGRMPAVEIADSIVQSG 1366
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E L++ + + A+V+YGDTDS+ + T + A ++G + A ++
Sbjct: 1367 RETLEKAIHLIDSE------PKWGAKVVYGDTDSLFILLRGKTKDQAFRIGEDIASTVTA 1420
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLLVKNLV 760
PIKL+FEKVY P +L++KKRY G + +P E+ D KGIETVRRD + +V
Sbjct: 1421 LNPAPIKLKFEKVYLPCVLMAKKRYVGFKYEHPDEQAPVFDAKGIETVRRDGIPAQQQMV 1480
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
CL + +D+ Y + LL R + + +K + T D V +
Sbjct: 1481 ETCLKLLFRTQDLSLVKDYCYDVWNKLLDGRASIQDYIFSKEVKLGTYSDKAPPPPGVAV 1540
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP-IDTHYYLENQI 878
A + +D P G+RVPYVI++ A+ +R+ P L + +D YY+ + +
Sbjct: 1541 AAKRMLKDRNDEPQYGERVPYVIVRGDPYARLVDRAVQPEEALYDRTKQLDAAYYISHVL 1600
Query: 879 SKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAK---------------RQ 923
PL RIF + + T ++ P+ + K A
Sbjct: 1601 IPPLDRIFSLVGADVHSWYDEMPKTVRSELAEPTFASPRKAAPDMSLLLNRIKIDAHFHN 1660
Query: 924 LSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDV 982
C+ C+A G +C C+ S +++ E + T C C + +
Sbjct: 1661 SQCLICEAPAPEG-ICDDCRTDPQATLSDLFSNIRDAEDRLSTVQTVCGTCAAFAPAEPN 1719
Query: 983 LCTSRDCPIFYRRKKAQK 1000
C S DCP Y R KA++
Sbjct: 1720 RCESLDCPWLYERVKAEE 1737
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 97 DIDYVI---GDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGP 153
+IDY + G + LP +IR+FG G C +H PYF++ M P
Sbjct: 14 NIDYYLAPPGPLDNSTLP----RVPVIRVFGNGNVGQKTCVHIHQVYPYFFVEYLGRMEP 69
Query: 154 DDISHFHQILEGRMREA-------NRNSKVPQFVRHIEMVQKRSIMYYQQQKS-QPFLKI 205
+ ++ + L + A N S+ QFVR + +V + + +Y S PFLK+
Sbjct: 70 EHVNRYIARLSRSLNHAIAVSMKRNPQSQKSQFVRAVTIV--KGVHFYGFHSSYSPFLKV 127
Query: 206 VVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVG 255
+A P +V IL G + SF +ES++ + L+FM D + G
Sbjct: 128 HIADPAVVNRATTILRSGTVM----RTSFRIFESHLNYVLQFMSDFGLYG 173
>gi|327349945|gb|EGE78802.1| DNA polymerase [Ajellomyces dermatitidis ATCC 18188]
Length = 1699
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 185/626 (29%), Positives = 301/626 (48%), Gaps = 49/626 (7%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y + L ++++ + E AR+ G+ + SRG KV S + R AK +N ++
Sbjct: 1065 YFVSRVQLNLKIIEANELVSRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPENFIL 1124
Query: 486 --PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE- 542
P Q G + V+E ++ FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 1125 ISPGRTQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGRVV 1184
Query: 543 -----------DARK----LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
D R+ L L + VN P+G + K +++ +L ++L E+L R
Sbjct: 1185 NWRGQNKLGFIDFRRPAGILELFKDQVNIAPNGIIYAKQEIRRSLLAKMLIEILETRVMV 1244
Query: 588 KADLK-EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K +K E D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +
Sbjct: 1245 KGGMKAEKDDKYLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETL 1304
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E L+ +V + AEV+YGDTDS+ V T E A +G E A ++ + +
Sbjct: 1305 EKAIALIH----SVERW--GAEVVYGDTDSIFVYLKGRTREEAFDIGEEIARKVTNSNPR 1358
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + +K D KGIETVRRD + + + L
Sbjct: 1359 PVKLKFEKVYHPCVLLAKKRYVGYKYESRSQKDPDFDAKGIETVRRDGTPAEQKIEEKAL 1418
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERM 823
+ D+ Y + + ++ ++ + K + T + + ++ +
Sbjct: 1419 KILFETADLSRVKSYFQKQCAKIMQGKVSIQDFCFAKEVRLGTYSERGMPPPGALISAKR 1478
Query: 824 RKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYYLENQISKPL 882
D T G+R+PYV+I A GA+ +R P +L ++ + +D YY+ + PL
Sbjct: 1479 MLEDPRTEAQYGERIPYVVISGAPGARLIDRCVSPEVLLHDSQLELDAEYYISKNLIPPL 1538
Query: 883 LRIFEPILKNASK---ELLSGDHTRSISISTPSNS----GIMKFAK------RQLSCIGC 929
RIF + N + E+ R I T + S G K + SC+ C
Sbjct: 1539 ERIFNLVGANVRQWYDEMPKYQRVRRIDGGTSNASANKEGFSSMKKTLESYMKLSSCVVC 1598
Query: 930 KALISNGT--LCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLC 984
+ + G +C C G + L K +E + ++ L C+ C G S +DV C
Sbjct: 1599 RDKLEEGEERICGGCLRDGHISLLQLKHRLMREERKKVY--LHKVCRSCMGVSWGEDVKC 1656
Query: 985 TSRDCPIFYRRKKAQKDMAEAKLQLD 1010
S+DCP+FY R + + + + ++
Sbjct: 1657 DSKDCPVFYTRTRQESTLMSTRAAVE 1682
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 47/223 (21%)
Query: 110 LPLSSGSAA--------IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQ 161
LP+++G A +IR+FG T G VC +HG PY YI + P +++ +
Sbjct: 25 LPVNAGPAPKSVRPKVPVIRVFGATETGQKVCAHIHGAFPYLYIEYQGSLNPKEVNTAIR 84
Query: 162 ILEGRMREA-------NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVA 214
L + A N K +V HI +V K Y + F KI + P +
Sbjct: 85 TLHLSIDHALAVSYRRNAYEKKTAYVAHITLV-KGVPFYGYHVGYRFFFKIYLFNPMHMT 143
Query: 215 SCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIE-------VPVGKYR 267
+L +G + + YES++ + ++M D N+ G +++ P+ Y
Sbjct: 144 RLADLLRQG----AVMKRVLQPYESHLQYLSQWMCDYNLYGCAYLKSSKVTFRAPIPTYL 199
Query: 268 KTAKTL--------------------SYCQLEFDCLYSDIISR 290
+ + + S+C LE D DII+R
Sbjct: 200 ENSTHIWHDRSIPESAVFDSFTLPRQSHCDLEVDIHVQDIINR 242
>gi|261193585|ref|XP_002623198.1| polymerase zeta subunit [Ajellomyces dermatitidis SLH14081]
gi|239588803|gb|EEQ71446.1| polymerase zeta subunit [Ajellomyces dermatitidis SLH14081]
Length = 1699
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 183/626 (29%), Positives = 302/626 (48%), Gaps = 49/626 (7%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y + L ++++ + E AR+ G+ + SRG KV S + R AK +N ++
Sbjct: 1065 YFVSRVQLNLKIIEANELVSRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPENFIL 1124
Query: 486 --PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE- 542
P Q G + V+E ++ FY P+ LDF SLYPS+M+AYN CYST +
Sbjct: 1125 ISPGRTQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSVMIAYNYCYSTCLGRVV 1184
Query: 543 -----------DARK----LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
D R+ L L + VN P+G + K +++ +L ++L E+L R
Sbjct: 1185 NWRGQNKLGFIDFRRPAGILELFKDQVNIAPNGIIYAKQEIRRSLLAKMLIEILETRVMV 1244
Query: 588 KADLK-EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K +K E D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +
Sbjct: 1245 KGGMKAEKDDKYLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETL 1304
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E L+ +V + AEV+YGDTDS+ V T E A +G E A ++ + +
Sbjct: 1305 EKAIALIH----SVERW--GAEVVYGDTDSIFVYLKGRTREEAFDIGEEIARKVTNSNPR 1358
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + +K D KGIETVRRD + + + L
Sbjct: 1359 PVKLKFEKVYHPCVLLAKKRYVGYKYESRSQKDPDFDAKGIETVRRDGTPAEQKIEEKAL 1418
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERM 823
+ D+ Y + + ++ ++ + K + T + + ++ +
Sbjct: 1419 KILFETADLSRVKSYFQKQCAKIMQGKVSIQDFCFAKEVRLGTYSERGMPPPGALISAKH 1478
Query: 824 RKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYYLENQISKPL 882
D T G+R+PYV+I A GA+ +R P +L ++ + +D YY+ + PL
Sbjct: 1479 MLEDPRTEAQYGERIPYVVISGAPGARLIDRCVSPEVLLHDSQLELDAEYYISKNLIPPL 1538
Query: 883 LRIFEPILKNASK---ELLSGDHTRSI----SISTPSNSGIMKFAK------RQLSCIGC 929
RIF + N + E+ R I S ++ + G K + SC+ C
Sbjct: 1539 ERIFNLVGANVRQWYDEMPKYQRVRRIDGGASNASANKEGFSSMKKTLESYMKLSSCVVC 1598
Query: 930 KALISNGT--LCSHC--KGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLC 984
+ + G +C C G + L K +E + ++ L C+ C G S +DV C
Sbjct: 1599 RDKLEEGEERICGGCLRDGHISLLQLKHRLMREERKKVY--LHKVCRSCMGVSWGEDVKC 1656
Query: 985 TSRDCPIFYRRKKAQKDMAEAKLQLD 1010
S+DCP+FY R + + + + ++
Sbjct: 1657 DSKDCPVFYTRTRQESTLMSTRAAVE 1682
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 47/223 (21%)
Query: 110 LPLSSGSAA--------IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQ 161
LP+++G A +IR+FG T G VC +HG PY YI + P +++ +
Sbjct: 25 LPVNAGPAPKSVRPKVPVIRVFGATETGQKVCAHIHGAFPYLYIEYQGSLNPKEVNTAIR 84
Query: 162 ILEGRMREA-------NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVA 214
L + A N K +V HI +V K Y + F KI + P +
Sbjct: 85 TLHLSIDHALAVSYRRNAYEKKTAYVAHITLV-KGVPFYGYHVGYRFFFKIYLFNPMHMT 143
Query: 215 SCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIE-------VPVGKYR 267
+L +G + + YES++ + ++M D N+ G +++ P+ Y
Sbjct: 144 RLADLLRQG----AVMKRVLQPYESHLQYLSQWMCDYNLYGCAYLKSSKVTFRAPIPTYL 199
Query: 268 KTAKTL--------------------SYCQLEFDCLYSDIISR 290
+ + + S+C LE D DII+R
Sbjct: 200 ENSTHIWHDRSIPESAVFDSFTLPRQSHCDLEVDIHVQDIINR 242
>gi|332027078|gb|EGI67174.1| DNA polymerase zeta catalytic subunit [Acromyrmex echinatior]
Length = 1974
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 195/606 (32%), Positives = 295/606 (48%), Gaps = 52/606 (8%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGS 493
+LL L I E+AR+ G+ + SRG +V S +LR AK N + P++ Q
Sbjct: 1358 KLLSHLDVIGRTCELARLFGIQFYEVFSRGSQFRVESIMLRLAKPMNYIPISPSIHQRAK 1417
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL--------------- 538
+ ++E + FY P+ LDF SLYPS+++AYN C+ST
Sbjct: 1418 MRAPECLPLIMEPESKFYTDPLIVLDFQSLYPSMIIAYNYCFSTCLGRIEHIGQYGPFEF 1477
Query: 539 ------VTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLK 592
V A KL + +N +P G FVK +++GILP +L E+L R K +K
Sbjct: 1478 GAATLRVRKNTALKLQ---DKINFSPCGVAFVKKEVRQGILPRMLSEILNTRLMVKESMK 1534
Query: 593 --EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTK 649
A++ + VL +QL LK+ AN YG+T A G++PCIEI SV S GR+ +E
Sbjct: 1535 LHPAENRTLQRVLHSQQLGLKLIANVTYGYTSANFSGRMPCIEIGDSVVSKGRETLERAI 1594
Query: 650 KLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKL 709
KLVE T G A V+YGDTDS+ + + E A +G E AD ++ T P+KL
Sbjct: 1595 KLVET--TPRWG----ARVVYGDTDSLFILLPGKSREEAFTIGEEIADAVTATNPPPVKL 1648
Query: 710 EFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKIL 768
+FEKV +P +L +KKRY G +Y T ++ + KGIETVRRD C V ++ + L +
Sbjct: 1649 KFEKVLHPSILQTKKRYCGYMYETRDQEKPEFLAKGIETVRRDGCPAVSKILEKALKILF 1708
Query: 769 VDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKR 826
+D+ QYV + R+ + L K + Y+ A +EL R+ K+
Sbjct: 1709 ETKDVSLVKQYVIRQFDKIFQRRVSILDLTFAKEF-RGMHGYKANACVPALELTRRLIKK 1767
Query: 827 DAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN--IPIDTHYYLENQISKPLLR 884
D P +RV YVI+ A P+ V+ + IP ++ YY+ I PL R
Sbjct: 1768 DPRAVPRTSERVRYVIVAGAPNQALIHCVRTPMEVVADPSLIP-NSVYYITKVIIPPLNR 1826
Query: 885 IFE--PILKNASKELLSG----DHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTL 938
F I NA + +S D+ + P S I +F SCI C +N +
Sbjct: 1827 CFNLFRIDINAWYKEISHRSNFDNIAHLGGDNPK-STIRQFFS-SASCITCGEQ-TNKEI 1883
Query: 939 CSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKA 998
C C + + + ++++LE ++ C C G L ++ C S DCP+ YR +
Sbjct: 1884 CPDCLLQPSRTVLVLLEKIKQLERNHQQITAICHSCIGRL-GNIECVSLDCPVLYRMAQV 1942
Query: 999 QKDMAE 1004
+K++A+
Sbjct: 1943 RKELAQ 1948
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 36/213 (16%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN-SKVP 177
+IR FG T G C +HG PY Y+ C D S+ +Q+ N +
Sbjct: 37 VIRAFGSTATGKKTCLHIHGVFPYLYVPCTVQENMD--SYAYQLAAAIDSALNTSFGSTL 94
Query: 178 QFVRHIEMVQKRSIM--YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
+H+ +Q+ S + Y +K F KI P ++ +L G+ L+ ++
Sbjct: 95 STNQHVYKIQRVSGIPFYGYHEKEHLFFKIYFYNPAIIKRTADLLQNGVILN----QTLQ 150
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTL---------------------- 273
YE+++ + L+FMID N+ G N I + KYR + +
Sbjct: 151 PYEAHIPYILQFMIDYNLYGMNLINLNSVKYRHSLQGCATEDSQNRSSMDFLDSEAYLPI 210
Query: 274 -----SYCQLEFDCLYSDIISRHPEGEFSKMAP 301
S C+LE D S+I++R E K+ P
Sbjct: 211 SITRQSMCELEADVYASEILNRQSVSEKLKLNP 243
>gi|91773640|ref|YP_566332.1| replicative DNA polymerase I [Methanococcoides burtonii DSM 6242]
gi|91712655|gb|ABE52582.1| DNA polymerase B, delta subunit with exonuclease activity
[Methanococcoides burtonii DSM 6242]
Length = 910
Score = 253 bits (645), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 282/528 (53%), Gaps = 50/528 (9%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
EK DV + + + N + E R+ Y +D+ L LL L + Y+ ++RV+G+ +
Sbjct: 335 EKLDVDAADMEEHWNDSGEKIRKFIDYSRRDSELALELLLDLKLLDKYIALSRVSGILLQ 394
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVI---PNVKQAGSEQGTYE---GATVLEARAGFYEK 513
+S GQ+ V LL + ++ V+ P+ + + + E G VLE G + K
Sbjct: 395 DTVSGGQTNMVEHILLTEFGKQGRVMSTKPDEETSSFRRKQNEDLKGGAVLEPEKGLH-K 453
Query: 514 PIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGIL 573
+ LD+ SLYP+IMMA+NLCY+T+V P P + V ++PS FVK + KGI+
Sbjct: 454 NVIVLDYKSLYPTIMMAHNLCYTTVVPPG-----KYPEDKVIRSPSKGEFVKPEVFKGIV 508
Query: 574 PEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEI 633
P +LE LL R K +K+A D E VLD QLALKI NS YG++G +L +++
Sbjct: 509 PSVLESLLDKRIETKKLMKQASDEGEYQVLDATQLALKILLNSFYGYSGYARARLYSLQM 568
Query: 634 SSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNA------------------EVIYGDTDS 675
++SVTS GR I T+ +V ++ TV ++ A V YGDTDS
Sbjct: 569 ANSVTSIGRGNIARTQDIVCNRIGTVILRDNKAYLRDEVDELKDDDKAVKLSVAYGDTDS 628
Query: 676 VMV----------QFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKR 725
V V + GV ++E + +G++ A ++ + P++LEFE LLI+KKR
Sbjct: 629 VFVHCKNDQDLEFEEGVFSLEDSALVGKKVASIVTASLPDPMELEFEATAKRVLLIAKKR 688
Query: 726 YAGLYW--TNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKST 783
YA + N D + KG+ETVRRD C L ++ L +L + DI G+V++V++
Sbjct: 689 YAQWIFEPANGGWTDSIKVKGLETVRRDWCELTSKMLNRVLELVLKEGDIEGSVEHVRTL 748
Query: 784 IS-----DLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRV 838
+ D+ + LV+TK +K+ Y+ K H+ + E +++R P +G+R+
Sbjct: 749 VDRVRNLDVAKDSDLFEDLVLTKNFSKSPSSYKNKQPHLTVVENIQRR-TGVRPAIGERI 807
Query: 839 PYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIF 886
P+VII A +G +R+EDP YV ENN+ +D YY++ Q+ P+ RI
Sbjct: 808 PFVII-AGRGL-FVDRAEDPDYVRENNVLLDVDYYIQKQMLPPVERIL 853
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 147/337 (43%), Gaps = 55/337 (16%)
Query: 93 FQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCP---Q 149
FQ LD DY D+ IIRIFG + +G SVCC V GFEPYFY+S Q
Sbjct: 3 FQILDADYFREDNQ-----------PIIRIFGRSEDGESVCCLVPGFEPYFYLSASGDLQ 51
Query: 150 GMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVAL 209
+G + F EG V+ E+V++ + YQ+ K LK+
Sbjct: 52 KLGEEIKEQF----EG--------------VKTFEIVERFEPIGYQETKKH-MLKVTTYD 92
Query: 210 PTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT 269
P V R + + ++ + YE+++LF RF+ID G +W+ + +
Sbjct: 93 PGNVPEIRDDVASMLGVNAI-------YETDILFRNRFLIDKGFKGMDWVSTQMEESVPN 145
Query: 270 AKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQV 329
K + C + S E + + + ++FDIEC G P P PVI V
Sbjct: 146 GKII--------CDRTIRTSHISEVQKIANSSLKYMAFDIECLPHDGGMPTPDVSPVIMV 197
Query: 330 ANLV--TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIG 387
+ +G K V+ +K V DV E D+L + + R+ DPDV+ G
Sbjct: 198 SFAFEPAYKGHKTL----VLVMKEVEG-VDEDVEMLPDESDLLNRFFEIFRDYDPDVITG 252
Query: 388 YNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLA 424
YNI FD+PY+ ++ + + S++ + R L+
Sbjct: 253 YNINDFDVPYITDRVKLLNESGSNINSAVGRDSRALS 289
>gi|190347734|gb|EDK40067.2| hypothetical protein PGUG_04165 [Meyerozyma guilliermondii ATCC 6260]
Length = 1593
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 195/682 (28%), Positives = 326/682 (47%), Gaps = 68/682 (9%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLAVY 426
R +L WR F V N+ L I K + S+ ++ NA + Y
Sbjct: 910 RHLLNVWRVFRSNVTLTSYSLENVVFHILHQTIAKCS-NRSLSKWFRSDNASKLLFVLNY 968
Query: 427 CLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI- 485
++ L Q++LD I VE AR GV + RG KV S L R +K ++L++
Sbjct: 969 YMQRILLVQKILDVREIITKNVEEARFIGVDFYSVFFRGSQYKVESILSRISKVESLLLN 1028
Query: 486 -PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDA 544
P+ Q + + + +LE A FY+ P+ LDF SLYPSIM+AYN C++TL+ D
Sbjct: 1029 SPSKTQVSNMKPLEAISLILEPDANFYKSPLVVLDFQSLYPSIMIAYNYCFTTLLGRLDG 1088
Query: 545 -----------RKLNLPPECVNK---------TPSGETFVKSNLQKGILPEILEELLAAR 584
+ L+LPP VN +P+G F KS+++K +L ++LEE+L R
Sbjct: 1089 FDPKKNTIGFLKHLDLPPGLVNLLKENDDINLSPNGYMFAKSSVRKSLLSKMLEEILNTR 1148
Query: 585 KRAKADLKEAKDPLEKA-VLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGR 642
+ K + KD A +L+ RQLALK+ AN YG+ A+ G++P I+ ++ S GR
Sbjct: 1149 IQVKTVMSMFKDDTNLAKLLNSRQLALKLIANVTYGYASASFSGRMPNSAIADAIVSTGR 1208
Query: 643 QMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT 702
+++ + ++E + A+V+YGDTDS+ + + E + K+GRE A +I+
Sbjct: 1209 EILTKSINIIESA-------NYGAKVVYGDTDSLFMYLPGRSKEDSFKIGREVAAHITSL 1261
Query: 703 FIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVT 761
F PI+L+FEKVY+P +L+SKKRY G + ++ KGIET+RRD + +V
Sbjct: 1262 FPDPIQLKFEKVYHPCVLLSKKRYVGNCFEYESQQEATFQAKGIETIRRDGIPAQQKIVE 1321
Query: 762 ECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHV 817
+ L + +D+ Y + ++ NR+ + K G K+ + A
Sbjct: 1322 KALRILFTTKDLSLVKDYTLTQFRKIIANRISIRDFCFAKEVRFGTYKSLNHIPAGAM-- 1379
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLE-----NNIPIDTHY 872
+A R RD + P +RVPYV+I+ A+ + +RS P +E + +D Y
Sbjct: 1380 -VAMRKVARDPRSEPQYRERVPYVVIEDAEKPRIRDRSVPPEEFIEAYRHLRPVRLDYEY 1438
Query: 873 YLENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAK--RQLSCI 927
Y+ + PL RIF + ++ KE+ +T ++G++K ++ + +CI
Sbjct: 1439 YIGRVLIPPLERIFNLVGADIRGWYKEIPK-------QTATDLHTGVLKMSRHIKSKTCI 1491
Query: 928 GCKALISNG---TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQ---- 980
C ++ G ++C C E L +V + E + C C S +
Sbjct: 1492 NCGGQVAEGESTSVCRECLSNEQALMVNSVMSTRYRERHLTEVARTCYHCISSTYACGSS 1551
Query: 981 ----DVLCTSRDCPIFYRRKKA 998
+ C ++ C +++ R ++
Sbjct: 1552 IQGLETQCENQSCDVYFERIRS 1573
>gi|190359302|sp|A7U6F2.1|DPOL_POV01 RecName: Full=DNA polymerase
gi|155382417|gb|ABU23717.1| putative B family DNA polymerase I [Pyramimonas orientalis virus]
Length = 1206
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 182/564 (32%), Positives = 282/564 (50%), Gaps = 89/564 (15%)
Query: 399 IEKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPI 458
+ K+DV I Q G + R ++A YC++D L L+ KL N + MA V VP+
Sbjct: 577 LAKDDVSPKEIFACQKGTSADRAKIAKYCVQDCALCNMLIIKLEVFANNMGMANVCLVPL 636
Query: 459 SFLLSRGQSIKVLSQLLRKAKQKNLVIPNVK--QAGSEQGTYEGATVLEARAGFY-EKPI 515
S++ RGQ IK+ S + ++ + N +IP +K Q E YEGA VL+ G Y E PI
Sbjct: 637 SYIFMRGQGIKIFSLVAKQCRDDNFIIPLIKFDQDSEEVEGYEGAIVLDPIPGIYVEAPI 696
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVN------------KTPSGET 562
+ +D+ASLYPS M++ N+ + ++V D + NLP E V+ KT E
Sbjct: 697 SVMDYASLYPSSMISENISHDSIVL--DKKYDNLPGVEYVDVTYDIFTGVGDKKTKVDEK 754
Query: 563 FVK----SNLQKGILPEILEELLAARKRAKADL-----------------KEAKDPLE-- 599
+ N +KG+LP IL +LL+ RK + + E D +
Sbjct: 755 TCRYAQFKNNEKGVLPRILMKLLSQRKSTRKQILHKTVTTNDNRSFTGLVDENDDSVTIK 814
Query: 600 -------------------------KAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
KA+LDG QLA KI+ANS+YG GA + E++
Sbjct: 815 TTDNNTITLSRNEILSSVDTYNDFMKAILDGLQLAYKITANSLYGQVGARTSPIYMKELA 874
Query: 635 SSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVP---------TV 685
+S T+ GR +I K+ +E + A+V+YGDTDS+ V F V +
Sbjct: 875 ASTTATGRNLIMKAKEFMETNY--------GADVVYGDTDSIFVDFKVKEKYGLLDKDAL 926
Query: 686 EAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKG 744
+ ++ + +A+D P LE+EK ++P++++SKK+Y G LY + K+ K + G
Sbjct: 927 QKSIDISVKASDAFKKELKAPHDLEYEKTFFPFIILSKKKYVGNLYEHDVNKY-KQKSMG 985
Query: 745 IETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT 804
I RRDN +VK + + +L ++I A+ ++K ++ L+ + LVITK L
Sbjct: 986 IVLKRRDNANIVKIVYGGIIDILLNRQNISFAINFLKESLRKLVNGEFHMDDLVITKTLR 1045
Query: 805 KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAY---ERSEDPIYV 861
T D + AH LA+RMR RD +AP DRVPY I+ K+ ++ E P Y+
Sbjct: 1046 TTYKD-PTRIAHKVLADRMRNRDPGSAPQSSDRVPYAYIEHDIKNKSLLQGDKIEHPSYI 1104
Query: 862 LENNIPIDTHYYLENQISKPLLRI 885
ENN+ ID +Y+ NQ+ KP+ ++
Sbjct: 1105 KENNVKIDYIFYITNQLMKPICQL 1128
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 110/243 (45%), Gaps = 26/243 (10%)
Query: 85 VSQCQSIMFQQLD---IDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEP 141
+ + ++ FQ +D DY DSN S II++FGVT EG+S+C V F+P
Sbjct: 10 LDESKNACFQVIDWYHFDYTNEDSNE--------SQYIIKMFGVTEEGYSLCVNVTDFQP 61
Query: 142 YFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRH---IEMVQKRSIMYYQQQK 198
+FYIS F Q + E N K+P ++ ++ V+K+SI +
Sbjct: 62 HFYISSKTK------DKFTQTELDDLEEYIIN-KLPYNFKNSLSVKQVRKKSIWGFTNNV 114
Query: 199 SQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNW 258
+ ++K+ + R +L I++ G F ESN+ LRF+ NI G W
Sbjct: 115 YKQYIKLSFQNIMSMYITRKMLQYRIKV-GRVQVQFDLNESNIDPFLRFIHIQNIKPGGW 173
Query: 259 IEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHF 318
I + + S CQ+ ++ P + +K+AP I+SFDIEC G F
Sbjct: 174 ISIDEYTTDVDDELESKCQINITTSCENV---QPL-DCNKVAPVNIMSFDIECTSSSGDF 229
Query: 319 PEP 321
P P
Sbjct: 230 PVP 232
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%)
Query: 318 FPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFI 377
P DP+IQ+ + + G + +NV+TL +C I GVDV++ +TE ++ W I
Sbjct: 361 LPPLKGDPIIQIGSTIHQYGSTKCSYKNVITLDTCNDIPGVDVITCKTETALIKEWCKLI 420
Query: 378 REVDPDVMIGYNICKFDLPYLIEK 401
VDPD+M GYNI FD Y+ ++
Sbjct: 421 HRVDPDIMTGYNIFGFDFDYIYKR 444
>gi|384484631|gb|EIE76811.1| hypothetical protein RO3G_01515 [Rhizopus delemar RA 99-880]
Length = 539
Score = 252 bits (644), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 271/532 (50%), Gaps = 53/532 (9%)
Query: 515 IATLDFASLYPSIMMAYNLCYSTLV----TPEDARKL------NLP-------PECVNKT 557
+A LDF SLYPSIM+AYN CYST + PE++ + +LP + +N +
Sbjct: 1 MAVLDFQSLYPSIMIAYNYCYSTCLGRVKKPEESSRFGVLESFDLPDGLLESLKDYINIS 60
Query: 558 PSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKD-PLEKAVLDGRQLALKISANS 616
P+G FVK ++KG+L ++L+ELL R K +K+ KD P +LD +QL LK +N
Sbjct: 61 PNGVMFVKHEIRKGLLGKMLQELLNTRVMVKKSMKDYKDDPGLLRMLDAKQLTLKFISNV 120
Query: 617 VYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDS 675
YG+T A+ G++P +EI+ S+ GR+ +E T L+ + T G A V+YGDTDS
Sbjct: 121 TYGYTSASFSGRMPSVEIADSIVQTGRETLERTINLINE--TEKWG----ARVVYGDTDS 174
Query: 676 VMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPE 735
V V F ++E A KL E AD ++ KPIKL+FEK+Y+P +L++KKRY G + N E
Sbjct: 175 VFVYFPGKSIEEAFKLSNEIADTVTNMNPKPIKLKFEKIYHPAVLLAKKRYVGFKYENFE 234
Query: 736 -KFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDL 794
K + KGIETVRRD+ + ++ L + +D+ +Y+ + + +L NR+ L
Sbjct: 235 DKEPVFEAKGIETVRRDHTPATQKILESSLKILFRTQDMSQLKEYLYNQWTKVLSNRVPL 294
Query: 795 SLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYER 854
+I K + +A+ RD P G+RVPYV+I GAK +R
Sbjct: 295 KDFIIAKEVRMGTYSSRGGPNGALVAQEKINRDIRAEPQYGERVPYVVIYKGPGAKLKDR 354
Query: 855 SEDPIYVLENN-IPIDTHYYLENQISKPLLRIFEPI-------LKNASKELLSGDHTRSI 906
P VL NN + +D YY+ QI P+ RIF I N + S
Sbjct: 355 VIRPEVVLNNNTLRLDAEYYIRKQIIAPISRIFNIIGVDIMSWYDNMPRTQKSAFLRLGN 414
Query: 907 SISTPSNSGIM---KFAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQEL-EV 962
+ P+ I ++ R C+ C L ++ +C C +E T++ Q L +
Sbjct: 415 CTNEPNKKNIKCIDQYYSRS-HCVVCSKL-TDQVICEIC-AKEPHKAIYTLASRQTLSQS 471
Query: 963 LFGRLWTQCQECQ------------GSLHQDVLCTSRDCPIFYRRKKAQKDM 1002
+ CQ+C + + DV CTS DCP++Y R KA++D+
Sbjct: 472 KLRHIMNICQDCSHLSALDAVTVEVNTDYADVPCTSLDCPLYYERLKAKEDV 523
>gi|50305361|ref|XP_452640.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641773|emb|CAH01491.1| KLLA0C09911p [Kluyveromyces lactis]
Length = 1451
Score = 252 bits (644), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 189/636 (29%), Positives = 307/636 (48%), Gaps = 58/636 (9%)
Query: 419 TRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLR-- 476
++R L Y + + +LL+ I +E AR+ G+ +L RG KV S L+R
Sbjct: 817 SKRCLLFYWITRLRVNFKLLETQNIIGKTIEQARLIGIDFYSVLYRGSQYKVESFLIRLC 876
Query: 477 KAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYS 536
K++Q L+ P+ Q +++ V+E + FY+ P+ LDF SLYPSI+MAYN CYS
Sbjct: 877 KSEQFILISPSRMQVRNQKALECIPLVMEPSSAFYKSPLLVLDFQSLYPSIVMAYNYCYS 936
Query: 537 TLV-------------------TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
T++ PED L L + + +P+G FVK L+K +L ++L
Sbjct: 937 TIIGRVESLNTKNNEIGITRYDIPEDL--LTLISDYITISPNGIVFVKKELRKSVLAKML 994
Query: 578 EELLAARKRAKADLKEAKDPLEKA-VLDGRQLALKISANSVYGFTGATV-GQLPCIEISS 635
+++L R K+ +KE D +LD RQ ALK+ AN YG+T A+ G++PC +I+
Sbjct: 995 KDILDTRFLMKSTMKELNDEHNLINMLDNRQEALKLLANVTYGYTSASFSGRMPCSDIAD 1054
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREA 695
S+ GR+ +E +++E TT E A+V+YGDTDS+ V + + A +GR+
Sbjct: 1055 SIVQTGRETLERAIEVIE---TTK---EWGAKVVYGDTDSLFVYLPGKSKDEAFVIGRQI 1108
Query: 696 ADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCL 754
A+ I+ KPI+L+FEKVY+P L++KKRY G Y + +K K D KGIETVRRD
Sbjct: 1109 AEEITRQNPKPIELKFEKVYHPCFLVTKKRYVGFSYESEYQKEPKFDAKGIETVRRDGTP 1168
Query: 755 LVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA 814
+ +V + L + D+ +Y+ ++ R+++ + + K G K
Sbjct: 1169 AQQKIVEKALRIMFETTDLSMVKEYLIGEFDKIITGRVNIQDFCFAREV-KLGHYKSEKT 1227
Query: 815 A--HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP-IDTH 871
A ++A +M + DA T P RVPYV+ G R P L + +D
Sbjct: 1228 APPGAQIAMQMMEEDARTEPQYKQRVPYVVKMGKIGETLSSRCLSPEAFLRSKTSRLDYT 1287
Query: 872 YYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQL------- 924
YY+ I PL R F+ + + +S HT + + S+ G R L
Sbjct: 1288 YYIVKNIIPPLQRFFQLVGVDIMDWYISMKHTLN-PLKVDSDDG--SHEGRSLTSIVKGK 1344
Query: 925 SCIGCKALISN---GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD 981
SC+ C+ + +C C+ ++ V+ + + CQ C H+D
Sbjct: 1345 SCLRCRKKVHPKFISPICGECRIDKSNTTLFLEESVRLKQSKMHSVMRTCQTCSYKFHKD 1404
Query: 982 VL---------CTSRDCPIFYRRKKAQKDMAEAKLQ 1008
+ C S+DCP+++ + K + + ++
Sbjct: 1405 AMAPLDQIALKCQSKDCPVYFSKFKYMNGLKDNDMR 1440
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 17/162 (10%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS-------HFHQILEGRMREAN 171
++R +G GH V HG PY +I G D S H+ILE RM E
Sbjct: 52 VLRFYGCLSTGHKVLIHCHGIFPYIFIKY-DGHSNDKASVIRNRCTSLHKILETRMIETF 110
Query: 172 RNSKVPQFVRHIEMVQKRSIM-----YYQQQKSQPFLKIVVALPTMVASCRGILDRGIQL 226
+ + + ++ + S++ Y +P+ KI + + S L ++
Sbjct: 111 TKTDFKEKLTSLKYIANVSVVKGVPFYGYHVGYEPYYKITL----LNGSYSNKLSELLRD 166
Query: 227 DGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRK 268
+ +E+++ + L+ M D N+ G W+++ +R+
Sbjct: 167 GRIFTSKVDVFEAHIPYLLQMMADYNLFGCGWLKLSKCYFRQ 208
>gi|345565978|gb|EGX48925.1| hypothetical protein AOL_s00079g146 [Arthrobotrys oligospora ATCC
24927]
Length = 1683
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 189/626 (30%), Positives = 301/626 (48%), Gaps = 59/626 (9%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R+ Y L LLD + E AR+ GV + SRG KV S + R AK +
Sbjct: 1050 RVLKYFLTRVKTDLELLDAQELVLRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKPE 1109
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N V+ P+ KQ GS+ V+E ++ FY P+ LDF SLYPS+M+A+N CYST +
Sbjct: 1110 NYVLISPSRKQVGSQNALECIPLVMEPQSNFYTSPVLVLDFQSLYPSVMIAFNYCYSTCL 1169
Query: 540 TP-------------EDARK----LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLA 582
D ++ L L +N P+G +VK ++K +L ++L E+L
Sbjct: 1170 GRIVQWKGGVNKLGFTDYKRENGLLELLRSQINIAPNGMMYVKPEVRKSLLAKMLGEILE 1229
Query: 583 ARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K +K K D + +++L+ RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1230 TRVMVKEGMKNDKQDKMLQSLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQT 1289
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
GR+ +E +++ + AEV+YGDTDS+ + T + A +G + A ++
Sbjct: 1290 GRETLEKAIEMIH------ATEKWGAEVVYGDTDSLFICLPGRTKDEAFDIGADIARTVT 1343
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+PIKL+FEKVY P +L++KKRY G Y + + + D KGIETVRRD + +
Sbjct: 1344 DANPRPIKLKFEKVYLPCVLLAKKRYVGYKYESKSQTTPEFDAKGIETVRRDGTPAEQKI 1403
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE---VKAAH 816
L + D+ Q+ + + ++ ++ + K + K G E +
Sbjct: 1404 EEAALKTLFRTSDLSQVKQFFQRQCTKIMAEKVSIQDFCFAKEV-KLGTYSERGMLPPGA 1462
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP-IDTHYYLE 875
+ A++M + D P G+RVPYV+I A GA+ +R P +LEN+ +D YY+
Sbjct: 1463 LISAKKMLE-DHRAEPQYGERVPYVVISGAPGARLADRCVPPEELLENSQNRLDAEYYIS 1521
Query: 876 NQISKPLLRIFEPILKNA-----------------SKELLSGDHTRSISISTPSNSGIMK 918
+ PL RIF + N L+ G+ + I
Sbjct: 1522 KNLIPPLERIFNLVGANVRGWYDEMPKIQRLRRIVEPNLIGGEEQQQ----QRRRHTIES 1577
Query: 919 FAKRQLSCIGCKALISNGTLCSHC-KGREAELYCKTVSQVQELEVLFGRLWTQCQECQG- 976
F K +CI C A + +C C + + +Y S++ ++E L C+ C
Sbjct: 1578 FMKGS-ACIVCYAKDTEKGICESCLEDIDGSIYT-LKSRITKMERKSEGLRRICRSCADI 1635
Query: 977 SLHQDVLCTSRDCPIFYRRKKAQKDM 1002
S ++V C S+DCP+FY R + ++
Sbjct: 1636 SNSEEVGCDSKDCPVFYSRARNDTNL 1661
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 83/207 (40%), Gaps = 40/207 (19%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-----NRN 173
I+R+FG T G VC +HG PY Y+ + DD+ + L + A RN
Sbjct: 42 ILRVFGATETGQKVCAHIHGAFPYLYVEYEGSLAQDDVGAYIYRLHASLDHALCKIYRRN 101
Query: 174 SKVPQ--FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
P+ FV I + + + + +LKI + P++ +L G L
Sbjct: 102 PHDPKNVFVARITLCKGVPFFGFHVGWTY-YLKIYLLNPSLTTRVSDLLRSGAILK---- 156
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT------------------- 272
K F YE+++ + ++MID N+ G +I +R+ T
Sbjct: 157 KQFQPYEAHLQYIPQWMIDYNLYGCGYINCSKVYFRQPIPTEEEAGEAHIWHTSTINRAD 216
Query: 273 ---------LSYCQLEFDCLYSDIISR 290
+S+C LE D SDI++R
Sbjct: 217 VLDDLEFPRISHCSLEIDIRVSDILNR 243
>gi|227977067|gb|ACP44142.1| DNA polymerase [Bathycoccus virus BpV161]
Length = 170
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 143/172 (83%), Gaps = 2/172 (1%)
Query: 526 SIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARK 585
SIMMA+NLCY TLV D +LPPE K P+G+ FVKS KGILPEILEELL+ARK
Sbjct: 1 SIMMAHNLCYCTLVKQHDVA--DLPPEAYTKAPTGDVFVKSTQFKGILPEILEELLSARK 58
Query: 586 RAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMI 645
RAK DLK+A DPLE+AVLDGRQLALKISANSVYGFTGATVGQLPC+EIS+S T+YGRQMI
Sbjct: 59 RAKQDLKKATDPLERAVLDGRQLALKISANSVYGFTGATVGQLPCLEISASTTAYGRQMI 118
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
+HTKKLVE+K+TT GYE +AEVIYGDTDSVM++F ++ +M+ G EAAD
Sbjct: 119 DHTKKLVEEKYTTANGYEGDAEVIYGDTDSVMIKFNCKELKTSMEYGXEAAD 170
>gi|146414932|ref|XP_001483436.1| hypothetical protein PGUG_04165 [Meyerozyma guilliermondii ATCC 6260]
Length = 1593
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 196/682 (28%), Positives = 327/682 (47%), Gaps = 68/682 (9%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLAVY 426
R +L WR F V N+ L I K + S+ ++ NA + Y
Sbjct: 910 RHLLNVWRVFRSNVTLTSYSLENVVFHILHQTIAKCS-NRSLSKWFRSDNASKLLFVLNY 968
Query: 427 CLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI- 485
++ L Q++LD I VE AR GV + RG KV S L R +K ++L++
Sbjct: 969 YMQRILLVQKILDVREIITKNVEEARFIGVDFYSVFFRGSQYKVESILSRISKVESLLLN 1028
Query: 486 -PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDA 544
P+ Q + + + +LE A FY+ P+ LDF SLYPSIM+AYN C++TL+ D
Sbjct: 1029 SPSKTQVSNMKPLEAISLILEPDANFYKSPLVVLDFQSLYPSIMIAYNYCFTTLLGRLDG 1088
Query: 545 -----------RKLNLPPECVNK---------TPSGETFVKSNLQKGILPEILEELLAAR 584
+ L+LPP VN +P+G F KS+++K +L ++LEE+L R
Sbjct: 1089 FDPKKNTIGFLKHLDLPPGLVNLLKENDDINLSPNGYMFAKSSVRKSLLSKMLEEILNTR 1148
Query: 585 KRAKADLKEAKDPLEKA-VLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGR 642
+ K + KD A +L+ RQLALK+ AN YG+ A+ G++P I+ ++ S GR
Sbjct: 1149 IQVKTVMLMFKDDTNLAKLLNSRQLALKLIANVTYGYASASFSGRMPNSAIADAIVSTGR 1208
Query: 643 QMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT 702
+++ + ++E + Y A+V+YGDTDS+ + + E + K+GRE A +I+
Sbjct: 1209 EILTKSINIIE-----LANY--GAKVVYGDTDSLFMYLPGRSKEDSFKIGREVAAHITSL 1261
Query: 703 FIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVT 761
F PI+L+FEKVY+P +L+SKKRY G + ++ KGIET+RRD + +V
Sbjct: 1262 FPDPIQLKFEKVYHPCVLLSKKRYVGNCFEYESQQEATFQAKGIETIRRDGIPAQQKIVE 1321
Query: 762 ECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHV 817
+ L + +D+ Y + ++ NR+ + K G K+ + A
Sbjct: 1322 KALRILFTTKDLSLVKDYTLTQFRKIIANRISIRDFCFAKEVRFGTYKSLNHIPAGAM-- 1379
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLE-----NNIPIDTHY 872
+A R RD + P +RVPYV+I+ A+ + +RS P +E + +D Y
Sbjct: 1380 -VAMRKVARDPRSEPQYRERVPYVVIEDAEKPRIRDRSVPPEEFIEAYRHLRPVRLDYEY 1438
Query: 873 YLENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAK--RQLSCI 927
Y+ + PL RIF + ++ KE+ +T ++G++K ++ + +CI
Sbjct: 1439 YIGRVLIPPLERIFNLVGADIRGWYKEIPK-------QTATDLHTGVLKMSRHIKSKTCI 1491
Query: 928 GCKALISNG---TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQ---- 980
C ++ G ++C C E L +V + E + C C S +
Sbjct: 1492 NCGGQVAEGESTSVCRECLSNEQALMVNSVMSTRYRERHLTEVARTCYHCISSTYACGSS 1551
Query: 981 ----DVLCTSRDCPIFYRRKKA 998
+ C ++ C +++ R ++
Sbjct: 1552 IQGLETQCENQSCDVYFERIRS 1573
>gi|50294045|ref|XP_449434.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528748|emb|CAG62410.1| unnamed protein product [Candida glabrata]
Length = 1481
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 205/689 (29%), Positives = 321/689 (46%), Gaps = 75/689 (10%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHH--SIISDLQNGNAETRRR 422
T R VL WR +E+ N+ L + K H S+ S+ + GN +
Sbjct: 799 TGRYVLNIWRLLRKEIAVTQYSFENMVHLLLKIRLPKYSCSHLTSLWSNFKTGNE--LKT 856
Query: 423 LAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN 482
Y L L +L K+ F N +E AR+ G+ + +RG KV S L+R K +N
Sbjct: 857 FLNYYLTRVRLNIGILKKISFTLNVMEEARLIGIDFQSVYNRGSQYKVESFLIRICKSEN 916
Query: 483 LVIPN-VKQAGSEQGTYEGA-TVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL-- 538
++ + K A +Q E V+E + FY+ P+ LDF SLYPSIM YN CYST+
Sbjct: 917 YILLSPSKVAVQKQKPLECVPLVMEPESAFYKSPLLVLDFQSLYPSIMSGYNYCYSTMMG 976
Query: 539 -VTPEDARK-------LNLPPECVNK-------TPSGETFVKSNLQKGILPEILEELLAA 583
V D K L E + K P+G + K +L+K L ++L E+L
Sbjct: 977 RVRELDGTKRTLGVTNFELKSELLKKLRDDIRIAPNGVIYAKEHLRKSTLSKMLSEILEI 1036
Query: 584 R---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTS 639
R K+ +DL L+K +L+ +QLALK+ AN YG+T A+ G++PC +++ S+
Sbjct: 1037 RFMIKKTISDLGSDHQALKK-LLESKQLALKLLANVTYGYTSASFSGRMPCSDLADSIVQ 1095
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
GR+ +E K++E T G A+V+YGDTDS+ V T E A ++G E ++ I
Sbjct: 1096 TGRETLEKAVKMIES--TASWG----AKVVYGDTDSLFVYLPGKTKEDAFRIGAEISNSI 1149
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKN 758
+ + KPI L+FEKVY+P +L+SKKRY G + + + + D KGIETVRRD +
Sbjct: 1150 TASNPKPITLKFEKVYFPCILLSKKRYVGYSYLSSSQLNPHFDAKGIETVRRDGTPAQQK 1209
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
+V L + +D+ YV T + + + + K E+K H +
Sbjct: 1210 VVENALRILFETKDLSKVKNYVVDTFTKIRSGNISIQDFCFAK---------EIKLGHYK 1260
Query: 819 ----------LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYER----SEDPIYVLEN 864
+A+R++K+D+ P +R+ Y+++K G ER SE Y +
Sbjct: 1261 SESTMPPGAVVAKRLKKQDSRAEPQYKERLSYLVVKGKSGQILRERCVSVSE---YFSND 1317
Query: 865 NIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQL 924
+ +D+ YY+ + PL R+F + + S G SI + + + + R
Sbjct: 1318 HFALDSEYYITKTLIPPLDRLFNIVGISVSDWNQEGPMFVEGSIKPYTGADNIPTSTR-- 1375
Query: 925 SCIGCKALISNGT--LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD- 981
C C+ +G LC +C E K + ++Q L C+ C D
Sbjct: 1376 -CKACEQNTVSGDSYLCDNCVSNEKMAASKLIIKIQASASKLKVLNDICRICSRQYTGDM 1434
Query: 982 --------VLCTSRDCPIFYRRKKAQKDM 1002
+ C S DCP +Y + KAQ+ M
Sbjct: 1435 GLLSSNNALKCVSYDCPNYYSKLKAQRLM 1463
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS--------HFHQILEGRMRE- 169
+IRIFG R GH + C VHG PYF++ DD S HQ+LE +R+
Sbjct: 57 VIRIFGCLRTGHQLLCHVHGIFPYFFVKYDG--KEDDTSIIINEKCAKLHQLLEQILRDK 114
Query: 170 ----ANRNSKVPQ-------FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVAS-CR 217
+RN K + ++ ++ +V+ Y + PF KI + P++ C
Sbjct: 115 MKSKGSRNDKQDETNLNELVYIANVSVVKGVPFYGYHVGWT-PFYKISLLNPSLSEQVCN 173
Query: 218 GILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
I ++ + +G YES + L+F D N+ +WI +R
Sbjct: 174 IIREQNVLQNGQN----EVYESQFPYLLKFTADFNLFACSWINFKKVYFR 219
>gi|255713872|ref|XP_002553218.1| KLTH0D11682p [Lachancea thermotolerans]
gi|238934598|emb|CAR22780.1| KLTH0D11682p [Lachancea thermotolerans CBS 6340]
Length = 1500
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 187/636 (29%), Positives = 307/636 (48%), Gaps = 57/636 (8%)
Query: 423 LAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN 482
L Y K + +LL I +E AR+ G+ ++SRG KV S L+R K ++
Sbjct: 876 LISYWKKRVNINMKLLHSQQTINQTIEQARLIGIDFYSVISRGSQYKVESVLMRLCKCEH 935
Query: 483 LVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV- 539
++ P+ Q ++ V+E + FY+ P+ LDF SLYPSIM+ YN CYST+V
Sbjct: 936 FLVLSPSKTQVRDQKALECIPLVMEPESAFYKSPLVVLDFQSLYPSIMIGYNYCYSTIVG 995
Query: 540 ---------TPEDARKLNLPPECVNK-------TPSGETFVKSNLQKGILPEILEELLAA 583
T A K+ +++ +P+G ++K +++K +L ++L ++L
Sbjct: 996 TVHEYNSKKTAIGASKVKFARGLLHELEDHLTISPNGVMYLKESVRKSMLAKMLTDILHT 1055
Query: 584 RKRAKA---DLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTS 639
R KA DLK + + K +L+ +Q+ALK+ AN YG+T A+ G++PC +++ S+
Sbjct: 1056 RLMIKATMSDLKSKNETVAK-LLNNKQVALKLLANVTYGYTSASFSGRMPCSDVADSIVQ 1114
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
GR+ +E L+E + A+V+YGDTDS+ V F + E A K G+E A I
Sbjct: 1115 TGRETLEKAISLIESH------SQWGAKVVYGDTDSLFVYFPGKSREEAFKFGKEMAKAI 1168
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKN 758
+ PI L+FEKVY+P LL+SKKRY G + ++ + K D KGIETVRRD +
Sbjct: 1169 TTCNPFPITLKFEKVYHPCLLVSKKRYVGYSFEKEDQNEPKFDAKGIETVRRDGHPAQQK 1228
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--H 816
+V + L + +D+ YV+ ++ ++ + + + K G K A
Sbjct: 1229 IVEKSLRILFDSKDLSAVKSYVQDQFRKIMKGQVSVQDFCFAREV-KLGSYKSEKTAPPG 1287
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYYLE 875
+A + + D P +R+PYV++K G ER P L N+ + +D YY+
Sbjct: 1288 AVVAAKKKAADHRAGPQYRERIPYVVVKGRPGQILRERCVPPEMFLSNDSLELDATYYIT 1347
Query: 876 NQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN 935
+ PL R F I + S+ + + R I + + +F R SC CK I
Sbjct: 1348 KTLLPPLQRFFNLIGVDVSQWYV--EMPRFQDIGNYQDGNLPEFM-RTTSCFNCKKEIRE 1404
Query: 936 GT--LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVL---------C 984
T LC+ C +++ + + + F + T C+ C ++ L C
Sbjct: 1405 KTKDLCAECFENKSQTITNLLQEDVSIRKHFKSILTVCRACCQPFTKNSLDNLNKIVTQC 1464
Query: 985 TSRDCPIFYRRKKAQKDMAEAKLQ--------LDRW 1012
++DCP++Y R K + M+ A+ LD W
Sbjct: 1465 DAQDCPVYYSRVKYKGYMSTARSAQLRDILKGLDHW 1500
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYI--SCPQGMGPDDI----SHFHQILEGRMREA-N 171
+IR++G GH+V C +HG PY Y+ +G I + H LE +++E+ N
Sbjct: 54 VIRVYGSLPSGHNVLCHIHGAFPYIYVPYDGEKGDSAQTIQSRCTQLHSCLETKLKESYN 113
Query: 172 RNSKV--------------PQFVRHIEMVQK-RSIMYYQQQKSQP-FLKIVVALPTMVAS 215
R P+ ++ + V R++ +Y F KI +
Sbjct: 114 RKGSAEEEEGKEKEKKDGFPENLKFVADVSPIRAVPFYGYHVGYSVFYKISLLSSATTTK 173
Query: 216 CRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV 261
L G G +S +E+++ F L+F D N+ G +W+++
Sbjct: 174 TAEFLREG---KATGKRS-QVFEAHIPFLLQFSADYNLFGCSWLKL 215
>gi|149241046|ref|XP_001526263.1| hypothetical protein LELG_02821 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450386|gb|EDK44642.1| hypothetical protein LELG_02821 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1803
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 198/688 (28%), Positives = 331/688 (48%), Gaps = 65/688 (9%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLAVY 426
R +L WR ++ N+C + L ++ + H + Q+GN + +A Y
Sbjct: 1128 RHILNVWRILKSDLSLTSYTLENVC-YHLLHVSVPRYLAHQLSQWWQSGNFQNLYVVASY 1186
Query: 427 CLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI- 485
++ L +++ I VE +R+ G+ + RG KV S L R K ++L++
Sbjct: 1187 YMRRIELTMKIIFVQELITRNVEHSRLIGIEFNSNFYRGSQYKVESILARITKPESLLLN 1246
Query: 486 -PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV----- 539
P+ Q + V+E ++ FY+ P+ LDF SLYP+IM+AYN C+STL+
Sbjct: 1247 SPSKYQVHEMRPIECIPLVMEPKSSFYKSPLIVLDFQSLYPTIMIAYNYCFSTLIGKLHN 1306
Query: 540 -TPEDA-----RKLNLPP---------ECVNKTPSGETFVKSNLQKGILPEILEELLAAR 584
P+ + L+LPP + +N +P+G FVKS+++K +L ++LEE+L R
Sbjct: 1307 FKPKKNNVGYLKNLDLPPGMIDLLKNDDAINVSPNGFAFVKSHVRKSVLAKMLEEILNIR 1366
Query: 585 KRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGR 642
+ K+ +K D E K + + RQ ALK+ AN YG+ AT G++P +I+ ++ S GR
Sbjct: 1367 IKTKSVMKMFGDDTELKKLYNSRQTALKLIANVTYGYASATFSGRMPNPDIADAIVSSGR 1426
Query: 643 QMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT 702
+++ + +L+E+ GGY A+V+YGDTDS+ V F + A KLGRE A ++
Sbjct: 1427 EILGKSIELIEN-----GGY--GAKVVYGDTDSLFVYFPGKSKAEAFKLGREIAKLVTDY 1479
Query: 703 FIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVT 761
F PIKL+FEKVY+P +L++KKRY G Y T + K D KGIETVRRD + +
Sbjct: 1480 FPDPIKLQFEKVYHPCVLLAKKRYVGYSYETENQVNPKFDAKGIETVRRDGIPAQQKITE 1539
Query: 762 ECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD--DYEVKAAHVEL 819
L + +++ ++ ++ N++ ++ K + K G+ D L
Sbjct: 1540 RALRILFETQNLSKVKEFTVKQFYKIMANKISINDFCFAKEV-KYGNYKDERYLPPGAVL 1598
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYER---SEDPI--YVLENNIPIDTHYYL 874
A + + D + P +R+PY++I+ + +R ED I + N + +D YY+
Sbjct: 1599 ASKAVEDDPRSEPQYKERIPYLVIRDPLKERIKDRVIFPEDFIKSFSTSNPLMLDYEYYI 1658
Query: 875 ENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQL--SCIGCKA- 931
+ PL RIF L G R P G+ +C+ C
Sbjct: 1659 TRVLIPPLERIFN----------LMGADVRGWYREMPKTLGLTDNITNPFNDTCLTCGGR 1708
Query: 932 LISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQEC------QGSLHQDVL-- 983
L +CS C+ +L V + + C+ C G + L
Sbjct: 1709 LDGQMYVCSKCRYSPQQLANNIVMTCKSAQQKITMNENTCRNCVHGVFLPGGIMSQYLDN 1768
Query: 984 CTSRDCPIFYRRKKAQKDMAEAKLQLDR 1011
C++RDC I++++ K ++ E KL L++
Sbjct: 1769 CSNRDCSIYFQKVKHEQ---ETKLLLNK 1793
>gi|442758439|gb|JAA71378.1| Putative dna polymerase delta catalytic subunit [Ixodes ricinus]
Length = 1319
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 158/491 (32%), Positives = 263/491 (53%), Gaps = 49/491 (9%)
Query: 557 TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANS 616
+P+G+ FV +++ GI+P+++ +LL AR+ + + DP K +L+ +QLA+K +ANS
Sbjct: 797 SPTGDRFVNKDVRLGIMPKVIVKLLDARREIRKRMARENDPFLKMLLNNQQLAIKCTANS 856
Query: 617 VYGFTGA-TVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYE------------ 663
+YGFTGA G L C+++S SVT +GR++I T++ V + + E
Sbjct: 857 MYGFTGALEKGMLACVQVSRSVTGFGRKLINRTERYVYNYLDALKRNEIDDPDYKGGLVT 916
Query: 664 --HNAEVIYGDTDSVMVQFGVPT-VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLL 720
EVIYGDTDSVMV+ T ++ A+ G + A++I+ +++PI+LEFEKVY PY+L
Sbjct: 917 MPSELEVIYGDTDSVMVKTPKNTSIKDALVWGEKLANWINTHYVRPIELEFEKVYMPYIL 976
Query: 721 ISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYV 780
+KKRYAG + +P+ K+D KG+E VRRD C V ++V+EC+ I+ D+ AV+Y
Sbjct: 977 FTKKRYAGRMFVDPKTPPKIDCKGLENVRRDTCPYVSDVVSECIRLIVEFDDLERAVRYA 1036
Query: 781 KSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPY 840
+ L + + L++T+ L+K +Y V HVE+ +++ +R + P G+RV +
Sbjct: 1037 TESAYKLTTKSVPIDKLLMTRALSKK--EYAVTMPHVEVVKKIAERTPGSEPRGGERVQF 1094
Query: 841 VIIK---------------AAKGAKAYERSEDPIYVLE-NNIPIDTHYYLENQISKPLLR 884
V+ K KA R+EDP ++L + ID +YL+ + PLLR
Sbjct: 1095 VMKKFTPFETHSLIGTNKVTGNKVKAAYRAEDPAHLLSTTDEEIDYEHYLK-MLKPPLLR 1153
Query: 885 IFEPILK----NASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTL-- 938
IF L A++ + + + S++ + KF RQ C C +++ + +
Sbjct: 1154 IFTVALNCSESEAARRIFGKCDSVGYHVPLESSAPMSKFVVRQKRCASCHSILKDTVVGS 1213
Query: 939 --CSHCK----GREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLH-QDVLCTSRDCPI 991
C C+ G YC + + L C++C G+ D+ CT++DC
Sbjct: 1214 DECDSCRIKKYGETNANYCIEDGVRAHAQRVLDFL-NICKKCVGANKASDISCTNQDCGY 1272
Query: 992 FYRRKKAQKDM 1002
F+ RK+A + M
Sbjct: 1273 FFTRKEAARTM 1283
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 93/138 (67%), Gaps = 1/138 (0%)
Query: 401 KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISF 460
KE+V + + L NG + R+++A YC++D LP +L+ +L + + ++ A+V +P+ +
Sbjct: 557 KENVKYKDMFRLFNGTPDDRQKIATYCVQDTMLPLKLMTRLSTMVSTIQFAKVNMIPLRY 616
Query: 461 LLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDF 520
+ +GQ I+ S +L +A+ +N++ P+ ++ ++GATV++ GFY PI TLDF
Sbjct: 617 VHGKGQQIRAFSLILHEARDRNMIFPSFIPFDKDEA-FQGATVVQPTTGFYRIPIITLDF 675
Query: 521 ASLYPSIMMAYNLCYSTL 538
ASLYPSI++AYNLC++TL
Sbjct: 676 ASLYPSIIIAYNLCFTTL 693
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 12/110 (10%)
Query: 304 ILSFDIEC-AGRKGHFP-EPTHDPVIQVA-----NLVTLQ----GEKQPFI-RNVMTLKS 351
++ FDIEC + FP DP+IQ+A N+ +Q + P I + + T+ +
Sbjct: 344 VMCFDIECISDDDASFPIARAGDPIIQIACVTVRNMCHIQLDDYAKPHPSISKTIFTIGT 403
Query: 352 CAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
C+ I GV+V+ + E +L+A+ ++I +PDV+ GYNI FD PY+ ++
Sbjct: 404 CSKIDGVEVVCCQDESALLVAFNNYIIYNNPDVITGYNIIGFDFPYVFQR 453
>gi|401623294|gb|EJS41398.1| rev3p [Saccharomyces arboricola H-6]
Length = 1502
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 196/685 (28%), Positives = 320/685 (46%), Gaps = 71/685 (10%)
Query: 365 TERDVLLAWRDFIREVDPDVM----IGYNICKFDLPYLIEKEDVHHSIISDLQNG-NAET 419
T R ++ WR +V+ + YN+ LP+ K ++++ NG N T
Sbjct: 820 TGRHIINIWRALRSDVNLTQYTVESLAYNLLHRRLPHFSYKS------LTNMWNGKNGST 873
Query: 420 RRRLAV-YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKA 478
+ + V Y L A + +LL K +I +E AR+ G+ + RG KV S L+R
Sbjct: 874 KLKTVVSYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRIC 933
Query: 479 KQKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYS 536
K ++ ++ P K ++ V+E + FY+ P+ LDF SLYPSIM+ YN CYS
Sbjct: 934 KSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLVVLDFQSLYPSIMIGYNYCYS 993
Query: 537 TLV----------TPEDARKLNLP-------PECVNKTPSGETFVKSNLQKGILPEILEE 579
T++ K +LP + V P+G + K++L+K L ++L +
Sbjct: 994 TMIGRVREIRLVDNELGVAKFSLPRNILTLVKDDVTIAPNGVIYAKTSLRKSTLSKMLTD 1053
Query: 580 LLAARKRAKADLKEAKDP--LEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSS 636
+L R K + E D K +L+ +QLALK+ AN YG+T A+ G++PC +++ S
Sbjct: 1054 ILDIRVMIKKTMNEISDDNLTLKRLLNNKQLALKLLANVTYGYTSASFSGRMPCSDLADS 1113
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+ GR+ +E ++E T NA+V+YGDTDS+ V +V+ A +G A
Sbjct: 1114 IVQTGRETLEKAIDIIEKDDT------WNAKVVYGDTDSLFVYLPGKSVDEAFDIGNAMA 1167
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLL 755
++ P+ L+FEK+Y+P +L SKKRY G Y + + D KGIETVRRD
Sbjct: 1168 KRVTQNNPNPVSLKFEKLYHPSILASKKRYVGFSYQSRFQVLPLFDAKGIETVRRDGIPA 1227
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA- 814
+ +V +C+ + +D+ +Y++ S + + ++ + +K + + E A
Sbjct: 1228 QQKIVEKCIRLLFQTKDLSRIKKYLRDEFSKIQVGKVSIQDFCFSKEVKLGAYESEKTAP 1287
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYY 873
A +A+R D P +RVPY+++K +G ER P EN + +D+ YY
Sbjct: 1288 AGAVVAKRKINEDHRAGPQYKERVPYLVVKGKQGQILRERCVSPEEYFENEYLELDSEYY 1347
Query: 874 LENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAK--RQLSCIGCKA 931
+ + L R+F I + G T+ + S + K A+ L+C C
Sbjct: 1348 INKILVPSLDRLFNLI------GVSVGTWTQEVVKSKNTTIKGEKLARIGTSLTCCNCGV 1401
Query: 932 LIS---NGTLCSHC-KGRE---AELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV-- 982
++ + LC C GR + L K + + +E + L T C+ C D
Sbjct: 1402 ELTKADSSQLCDDCLAGRNVTTSSLLIKKLKRQKE----YNTLKTVCRTCSYRYTSDAGI 1457
Query: 983 -------LCTSRDCPIFYRRKKAQK 1000
C S DCPIF+ R K K
Sbjct: 1458 EGDRIASECNSYDCPIFFSRVKTLK 1482
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 78/182 (42%), Gaps = 24/182 (13%)
Query: 105 SNRELLPLSS-GSAAIIRIFGVTREGHSVCCKVHGFEPYF------YISCPQGMGPDDIS 157
S+ E LPL+ IR+FG GH V C VHG PY YIS + +
Sbjct: 45 SHGESLPLNQFDRVPTIRVFGALSTGHQVLCHVHGILPYIFIKYDGYISDTSTLRHQRCA 104
Query: 158 HFHQILE---------GRMREANRNSKV---PQFVRHIEMVQKRSIMYYQQQKSQPFLKI 205
H+ILE G+ + N NS +V ++ +V+ Y S F KI
Sbjct: 105 QVHKILERKLKACFTKGKKDKDNSNSDKLGNLAYVANVSVVKGIPFYGYHVGWSL-FYKI 163
Query: 206 VVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGK 265
+ P+ V ++ G D F TYES++ + L++ D N+ G +WI V
Sbjct: 164 SLLNPSSVNRISELIRNGTIFDN----KFETYESHISYLLQWTADFNLFGCSWINVDECY 219
Query: 266 YR 267
+R
Sbjct: 220 FR 221
>gi|403161840|ref|XP_003322150.2| hypothetical protein PGTG_03687 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171949|gb|EFP77731.2| hypothetical protein PGTG_03687 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1748
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 200/707 (28%), Positives = 323/707 (45%), Gaps = 76/707 (10%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDL----QNGNAETR 420
T R VL WR E+ N+ Y + + H S L ++G E R
Sbjct: 1030 TGRHVLSIWRIIRSELALTQYTFENVV-----YHVLRTRTPHYSFSTLAKWWKDGTVEHR 1084
Query: 421 RRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
RR+ +Y + L L+++ I E++R GV +SRG KV S + R +K
Sbjct: 1085 RRVLMYYIARVELDINLVEETEIISRNAEISRTLGVDFFSAISRGSQFKVESVVFRISKP 1144
Query: 481 KNLVIPN-VKQAGSEQGTYEG-ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
+N V+P+ ++ ++Q E V+E ++ FY+ P+ LDF SLYPSIM+AYN CYST
Sbjct: 1145 ENYVLPSPSREEVAKQNAAECIPLVMEPQSAFYKSPLLVLDFQSLYPSIMIAYNYCYSTC 1204
Query: 539 VTPEDARK---------LNLP-------PECVNKTPSGETFVKSNLQKGILPEILEELLA 582
+ + K L+LP + + +P+G FVK +++K +L ++L E L
Sbjct: 1205 LGRVSSFKGVNKLGTSILDLPDGLLKLMKDDIIVSPNGLMFVKHHVRKSLLSKMLSEFLD 1264
Query: 583 ARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K +K K D +L+ RQL LK AN YG+T A+ G++PC+EI+ ++
Sbjct: 1265 TRVMIKQSMKFTKSDKALTKMLNARQLGLKFIANVTYGYTSASFSGRMPCVEIADAIVQT 1324
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
GR+ +E + +++ E A+V+YGDTDS+ V T E A ++G E AD ++
Sbjct: 1325 GRETLEKSMEVIH------SVKEWGAKVVYGDTDSLFVYLPGKTKEEAFRIGNEMADAVT 1378
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNL 759
P+KL+FEKVY P +L++KKRY G + N + + D KGIE VRRD ++ +
Sbjct: 1379 KRNPAPVKLKFEKVYLPCVLMAKKRYVGAKYENLSDTEPVFDAKGIEVVRRDGIPALQKI 1438
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVE 818
CL K+ +D+ Y+ LL+ ++ + K + T +
Sbjct: 1439 QETCLKKLFATQDLSDIKAYLYRQWQRLLLGKVSIQDFTFAKEVKLGTYSEKGPPPPGAL 1498
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDP-IYVLENNIPIDTHYYLENQ 877
+A R D + P +RVPYVI+K A ++ +R+ P + + + +D YY+
Sbjct: 1499 IAARKMAIDPRSEPAYAERVPYVIVKGAPQSRLRDRAVSPELLLQNRLLALDAEYYINRV 1558
Query: 878 ISKPLLRIFE-------------PILKNASKELLSGDHTRSIS----------------- 907
L RIF P + SK D TR +
Sbjct: 1559 FIPALSRIFNIIGVDVAAWYQAMPRMIRVSKSGGLLDTTRKTNPSSKIPENRPAEAVDNR 1618
Query: 908 ------ISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELE 961
S+ SN ++ R C+ C+ G LC C + C +S+ + +E
Sbjct: 1619 PIDRAQPSSKSNKLLVDEHFRSDRCLNCEKEGQKGILCESCGRDRTGVACSLMSKARLIE 1678
Query: 962 VLFGRLWTQCQECQG--SLHQDVLCTSRDCPIFYRRKKAQKDMAEAK 1006
++ C+ C + + C S DC + Y R KA + +++
Sbjct: 1679 RKRSQIEQVCRRCASIPPMETTIDCDSLDCSVLYERVKANWAVQDSR 1725
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 58/228 (25%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILE-----------GRM 167
++R+FG T+ G V VHG PYFY+ G+ PD + + + L G++
Sbjct: 55 VLRLFGATQAGQRVVAHVHGAMPYFYVQFDAGILPDTVHSYIRRLGAALNYATAASLGKI 114
Query: 168 REANRNSK-VPQFVRHIEMVQKRSIMYYQ-QQKSQPFLKIVVALPTMVASCRGIL----- 220
+AN + Q+V +I + + I +Y + FLKI P +L
Sbjct: 115 NKANPADRGRHQYVAYIALC--KGIPFYGFHVGYRYFLKIYCVQPKFKKRMAELLRTGKV 172
Query: 221 ------DRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT----- 269
+G G F +E ++ F L+FM+D N+ G W+E+ +R+
Sbjct: 173 MSPSAYSQGDPAKGTRPGGFKVFEEHIPFHLQFMLDHNLYGCGWVELSNCAFRRPLPDNY 232
Query: 270 --------------------------AKTLSYCQLEFDCLYSDIISRH 291
AK+ SYC +E DC +DI++RH
Sbjct: 233 VTYEGSQGPIYLASSVPESQMAHVDLAKS-SYCPIELDCTVADIMNRH 279
>gi|115530809|emb|CAL49423.1| REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like
[Xenopus (Silurana) tropicalis]
Length = 517
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/509 (34%), Positives = 264/509 (51%), Gaps = 36/509 (7%)
Query: 525 PSIMMAYNLCYST-------LVTPEDAR----KLNLPPEC-------VNKTPSGETFVKS 566
PSI++AYN CYST L ED + L +PP+ + +P+G FVK+
Sbjct: 7 PSIVIAYNYCYSTCLGNIENLGKYEDFKFGCSSLQVPPDLLYQLRHDITVSPNGVAFVKA 66
Query: 567 NLQKGILPEILEELLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV 625
++KG+LP +LEE+L R K +K+ K D +LD RQL LK+ AN +G+T A
Sbjct: 67 CVRKGVLPRMLEEILKTRIMVKQSMKKYKHDKGLTRLLDARQLGLKLIANVTFGYTAANY 126
Query: 626 -GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPT 684
G++PC+EI S+ R+ +E KLV D + A+V+YGDTDS+ V T
Sbjct: 127 SGRMPCVEIGDSIVHKARETLERAIKLVNDT------KKWGAKVVYGDTDSMFVLLKGAT 180
Query: 685 VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTK 743
E + K+G+E A+ ++ T KPIKL+FEKVY P +L +KKRY G +Y T +K D K
Sbjct: 181 KEQSFKIGQEIAEAVTATNPKPIKLKFEKVYLPCVLQTKKRYVGYMYETVDQKDPVFDAK 240
Query: 744 GIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL 803
GIETVRRD C V ++ L + RDI QYV+ L+ + + L+ K
Sbjct: 241 GIETVRRDACPAVGKILERSLKLLFETRDISQIKQYVQKQCIKLVEGKASMQDLIFAKEY 300
Query: 804 TKTGDDYEVKAA--HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYV 861
+ Y+ A +EL +M D + P VG+RVPYVII + G + PI V
Sbjct: 301 -RGSFAYKPGACVPALELTRKMVAYDRRSEPRVGERVPYVIIYGSPGVPLIQLVRRPIDV 359
Query: 862 LEN-NIPIDTHYYLENQISKPLLRIFEPI---LKNASKELLSGDHTRSISIS-TPSNSGI 916
L++ N+ ++ YY+ QI PL RIF I + + EL T S + + + G
Sbjct: 360 LQDHNLRLNGTYYITKQILPPLNRIFSLIGVDVFSWYDELPRIQKTFSTARNEQEARKGT 419
Query: 917 MKFAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG 976
+ L C C L +G +CS C+ + + +++ELE +L C+ C G
Sbjct: 420 ISQYFTTLHCPVCDELTQHG-ICSKCRSQPQHVVVILNQEIRELEYKQDQLAKLCRNCTG 478
Query: 977 SLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+Q + C S +CP+ ++ + +++ +A
Sbjct: 479 CSNQQIQCVSLNCPVLFKLSRVSRELCKA 507
>gi|401881075|gb|EJT45380.1| zeta DNA polymerase [Trichosporon asahii var. asahii CBS 2479]
Length = 564
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 272/552 (49%), Gaps = 39/552 (7%)
Query: 483 LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE 542
+V P+ +Q G + + + E + +Y PI LDF SLYPS+M+AYN+CYST +
Sbjct: 1 MVTPSKQQVGLQNAPFAVPLIHEPESKYYNHPIIVLDFQSLYPSVMIAYNICYSTCLGRV 60
Query: 543 DARK----------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKR 586
+ K L L + + TP+G FVK ++K +L ++L E+L R
Sbjct: 61 EQFKGTNKFGFTELKVPDGLLELLKDYLTVTPNGMIFVKPAVRKSLLAKMLGEILDTRVM 120
Query: 587 AKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQM 644
K +K +D +L+ RQL LK+ AN YG+T AT G++PCIEI+ S+ GR+
Sbjct: 121 VKQAMKGYRDNKSLTQMLNARQLGLKLMANVTYGYTSATYSGRMPCIEIADSIVQTGRET 180
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
+E ++L+ + + A V+YGDTDS+ V + + A K+G + AD ++
Sbjct: 181 LEKAQELINSE------AKWGATVVYGDTDSLFVALPGRSKDEAFKIGHDIADAVTAMNP 234
Query: 705 KPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTEC 763
KP+KL+FEKVY +L++KKRY G + +P+ D + D KGIET+RRD + +
Sbjct: 235 KPVKLKFEKVYMGSVLMAKKRYVGFKYEHPDDVDPVFDAKGIETIRRDGFPAQQKIEEIA 294
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL-TKTGDDYEVKAAHVELAER 822
L + ++D+ +V+ +L R+ L ++ K + T + V +A R
Sbjct: 295 LKMLFKNQDLSEIKAFVQDEWRKILTGRVSLQDFIVAKEVRLGTYSEKGVPPPGAAVAYR 354
Query: 823 MRKRDAATAPNVGDRVPYVIIKAAKGAKAY-ERSEDPIYVLENNIPIDTHYYLENQISKP 881
+D G+RVPY+I ++ G K +++ P +L +N+ ID YY+ N + P
Sbjct: 355 RILKDPRDEVEYGERVPYIISDSSTGGKRLIDKARTPEEMLSSNLGIDKEYYIRNLLIPP 414
Query: 882 LLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAK--------RQLSCIGCKALI 933
L RIF L A E RS +ST +G A+ R C+ C A
Sbjct: 415 LSRIFN--LVGADVEQWYDSMPRSKRVSTYGANGGGGSARTTRIDAHFRSRHCLVCGAE- 471
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGS-LHQDVLCTSRDCPIF 992
S LC+ C+ A +S+ L C C G+ + VLC S DC
Sbjct: 472 SGDALCAACRDEPAATAHALLSRQHAAHSRLAELQRICASCAGTGPAERVLCDSIDCSAL 531
Query: 993 YRRKKAQKDMAE 1004
Y R +A+KD+ +
Sbjct: 532 YARARAEKDVTD 543
>gi|12324676|gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic subunit [Arabidopsis thaliana]
Length = 1871
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 195/639 (30%), Positives = 306/639 (47%), Gaps = 47/639 (7%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK-EDVHHSIISD-LQNGNAETRRRLA 424
R VL AWR EV ++ Y I L +K + + ++++ +G A R R
Sbjct: 1210 RIVLNAWRLIRGEVKLNM---YTIEAVSEAVLRQKVPSIPYKVLTEWFSSGPAGARYRCI 1266
Query: 425 VYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL- 483
Y ++ A L ++ +L I E+ARV G+ +LSRG +V S LLR A +N
Sbjct: 1267 EYVIRRANLNLEIMSQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYL 1326
Query: 484 -VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE 542
+ P +Q S+ V+E + FY+ P+ LDF SLYPS+++AYNLC+ST +
Sbjct: 1327 AISPGNQQVASQPAMECVPLVMEPESAFYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKL 1386
Query: 543 DARKLNL--------------PPECVNKTPSGETFVKSNLQKGILPEILEELLAAR---K 585
K+N + +TP+ +V +++GILP +LEE+L+ R K
Sbjct: 1387 AHLKMNTLGVSSYSLDLDVLQDLNQILQTPNSVMYVPPEVRRGILPRLLEEILSTRIMVK 1446
Query: 586 RAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQM 644
+A L ++ L + + + RQLALK+ AN YG+T A G++PC E++ S+ GR
Sbjct: 1447 KAMKKLTPSEAVLHR-IFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRST 1505
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
+E V NA V+YGDTDS+ V TV+ A +G+E A I+
Sbjct: 1506 LEKAISFVN------ANDNWNARVVYGDTDSMFVLLKGRTVKEAFVVGQEIASAITEMNP 1559
Query: 705 KPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTEC 763
P+ L+ EKVY+P L++KKRY G + +P + + + D KGIETVRRD C V + +
Sbjct: 1560 HPVTLKMEKVYHPCFLLTKKRYVGYSYESPNQREPIFDAKGIETVRRDTCEAVAKTMEQS 1619
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVEL 819
L ++I Y+ +L R+ L + K G T D + A + +
Sbjct: 1620 LRLFFEQKNISKVKSYLYRQWKRILSGRVSLQDFIFAKEVRLGTYSTRDSSLLPPAAI-V 1678
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP--IDTHYYLENQ 877
A + K D T P +RVPYV+I GA+ + DP+ +L+ + P ++ YY+ Q
Sbjct: 1679 ATKSMKADPRTEPRYAERVPYVVIHGEPGARLVDMVVDPLVLLDVDTPYRLNDLYYINKQ 1738
Query: 878 ISKPLLRIFEPILKNASKELLSGDH-TRSISISTPSNSGI-----MKFAKRQLSCIGCKA 931
I L R+F + + ++ L TRS P NS + + CI C
Sbjct: 1739 IIPALQRVFGLVGADLNQWFLEMPRLTRSSLGQRPLNSKNSHKTRIDYFYLSKHCILCGE 1798
Query: 932 LIS-NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWT 969
++ + LC+ C ++ V + +LE L T
Sbjct: 1799 VVQESAQLCNRCLQNKSAAAATIVWKTSKLEREMQHLAT 1837
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQ-------GMGPDDISHFHQILEGRMREAN 171
+IRI+G T G C +H PY YI C + G+ ++ ++ + + N
Sbjct: 46 VIRIYGSTPAGQKTCLHIHRALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGN 105
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVV-----ALPTMVASCRGILDRGIQL 226
SK Q + E+V+ + Y + + F+KI + P VA +L G L
Sbjct: 106 AASKR-QHIHDCEIVRAKKFYGYHSTE-EAFVKIYLYPYSSYHPPDVARAASLLLAGAVL 163
Query: 227 DGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
KS YES++ F L+F++D N+ G + + K+R
Sbjct: 164 G----KSLQPYESHIPFILQFLVDYNLYGMGHVHISKMKFR 200
>gi|406696979|gb|EKD00249.1| hypothetical protein A1Q2_05426 [Trichosporon asahii var. asahii CBS
8904]
Length = 564
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 272/552 (49%), Gaps = 39/552 (7%)
Query: 483 LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE 542
+V P+ +Q G + + + E + +Y PI LDF SLYPS+M+AYN+CYST +
Sbjct: 1 MVTPSKQQVGLQNAPFAVPLIHEPESKYYNHPIIVLDFQSLYPSVMIAYNICYSTCLGRV 60
Query: 543 DARK----------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKR 586
+ K L L + + TP+G FVK ++K +L ++L E+L R
Sbjct: 61 EQFKGTNKFGFTELKVPDGLLELLKDYLTVTPNGMIFVKPAVRKSLLAKMLGEILDTRVM 120
Query: 587 AKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQM 644
K +K +D +L+ RQL LK+ AN YG+T AT G++PCIEI+ S+ GR+
Sbjct: 121 VKQAMKGYRDNKSLTQMLNARQLGLKLMANVTYGYTSATYSGRMPCIEIADSIVQTGRET 180
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
+E ++L+ + + A V+YGDTDS+ V + + A K+G + AD ++
Sbjct: 181 LEKAQELINSE------AKWGATVVYGDTDSLFVALPGRSKDEAFKIGHDIADAVTAMNP 234
Query: 705 KPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTEC 763
KP+KL+FEKVY +L++KKRY G + +P+ D + D KGIET+RRD + +
Sbjct: 235 KPVKLKFEKVYMGSVLMAKKRYVGFKYEHPDDVDPVFDAKGIETIRRDGFPAQQKIEEIA 294
Query: 764 LHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL-TKTGDDYEVKAAHVELAER 822
L + ++D+ +V+ +L R+ L ++ K + T + V +A R
Sbjct: 295 LKMLFKNQDLSEIKAFVQDEWRKVLTGRVSLQDFIVAKEVRLGTYSEKGVPPPGAAVAYR 354
Query: 823 MRKRDAATAPNVGDRVPYVIIKAAKGAKAY-ERSEDPIYVLENNIPIDTHYYLENQISKP 881
+D G+RVPY+I ++ G K +++ P +L +N+ ID YY+ N + P
Sbjct: 355 RILKDPRDEVEYGERVPYIISDSSTGGKRLIDKARTPEEMLSSNLGIDKEYYIRNLLIPP 414
Query: 882 LLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAK--------RQLSCIGCKALI 933
L RIF L A E RS +ST +G A+ R C+ C A
Sbjct: 415 LSRIFN--LVGADVEQWYDSMPRSKRVSTYGANGGGGSARTTRIDAHFRSRHCLVCGAE- 471
Query: 934 SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGS-LHQDVLCTSRDCPIF 992
S LC+ C+ A +S+ L C C G+ + VLC S DC
Sbjct: 472 SGDALCAACRDEPAATAHALLSRQHAAHSRLAELQRICASCAGTGPAERVLCDSIDCSAL 531
Query: 993 YRRKKAQKDMAE 1004
Y R +A+KD+ +
Sbjct: 532 YARARAEKDVTD 543
>gi|150863959|ref|XP_001382618.2| DNA polymerase zeta [Scheffersomyces stipitis CBS 6054]
gi|149385215|gb|ABN64589.2| DNA polymerase zeta, partial [Scheffersomyces stipitis CBS 6054]
Length = 1489
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 186/607 (30%), Positives = 300/607 (49%), Gaps = 76/607 (12%)
Query: 448 VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGA------ 501
VE +R+ G+ + RG ++ S L R AK +NL++ + S+Q +E
Sbjct: 903 VENSRLIGIDFNSNFYRGSQFRIESILSRLAKSENLLL----NSPSKQQVFEMKPIECIP 958
Query: 502 TVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV------TPEDA-----RKLNLP 550
++E + FY+ P+ LDF SLYPS+M+AYN C+STL+ P + L+LP
Sbjct: 959 LIMEPNSNFYKSPLVVLDFQSLYPSVMIAYNYCFSTLLGRLHNFNPNKNEIGYLKNLSLP 1018
Query: 551 P---------ECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKA 601
P + +P+G FVKSN++K IL ++LEE+L+ R + K +K +D E
Sbjct: 1019 PGLVDLMEKENAITLSPNGYMFVKSNVRKSILAKMLEEILSTRVKVKEVMKLFRDDRELT 1078
Query: 602 VL-DGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTV 659
L D RQLALK+ AN YG+T AT G++P +IS ++ S GR+++ + +++ +
Sbjct: 1079 RLYDARQLALKLIANVTYGYTSATFSGRMPNPDISDAIVSTGREILSKSIEIINN----- 1133
Query: 660 GGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYL 719
G + A+V+YGDTDS+ + F + A +GR A YI+ F PIKL+FEKVY+P +
Sbjct: 1134 GNF--GAKVVYGDTDSLFIYFPGKSRSEAFSIGRHIAQYITDQFPDPIKLKFEKVYHPCV 1191
Query: 720 LISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQ 778
L++KKRY G Y + K D KGIETVRRD + +V + L + +++ +
Sbjct: 1192 LLTKKRYVGYSYEYENQTSPKFDAKGIETVRRDGIPAQQKIVEKSLRILFETKNLSRVKE 1251
Query: 779 YVKSTISDLLMNRMDLSLLVITKGL---TKTGDDYEVKAAHVELAERMRKRDAATAPNVG 835
YV+ + +N++ + K + T + Y A V A++ D P
Sbjct: 1252 YVQKQFHKISINKVSVIDFCFAKEVRYGTYKNEKYLPPGAIV--AQKKVDEDHRKEPQYR 1309
Query: 836 DRVPYVIIKAAKGAKAYERSEDP-----IYVLENNIPIDTHYYLENQISKPLLRIFEPI- 889
+RVPYV++ + +R P Y N +D YY+ + PL RIF I
Sbjct: 1310 ERVPYVVVSDPTKTRIKDRCISPEEFIDSYKTTNPYILDYEYYITRVLIPPLERIFNLIG 1369
Query: 890 --LKNASKELLSGDHTRSISISTPSNSGIMKFAK--RQLSCIGCKALIS---NGTLCSHC 942
+K +EL SN GI+ ++ R +C+GC + + LCS C
Sbjct: 1370 VDVKGWYREL--------PKFQKNSNKGILNISRNIRTHACLGCGDKLQSSTSSYLCSSC 1421
Query: 943 KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV----------LCTSRDCPIF 992
+ E ++ +S+ ++ E + + CQ C + + C +RDC ++
Sbjct: 1422 RHNELQVVTNLLSENKKNETNIITMNSLCQRCVNRNFEGIGTNVTKSCADECQNRDCSVY 1481
Query: 993 YRRKKAQ 999
Y + KA
Sbjct: 1482 YNKFKAH 1488
>gi|328780807|ref|XP_003249865.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Apis
mellifera]
Length = 1633
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 189/604 (31%), Positives = 297/604 (49%), Gaps = 48/604 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
R+L L I E AR+ G+ + SRG +V S +LR AK N V P+++Q
Sbjct: 1023 RILIHLDIIGQTCEHARLFGIQFYEVFSRGSQFRVESMMLRLAKPLNYIPVSPSIQQRAR 1082
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV-------------- 539
+ ++E ++ FY P+ LDF SLYPSI++AYN C+ST +
Sbjct: 1083 MRAPESLPLIMEPQSAFYTDPLVVLDFQSLYPSIIIAYNYCFSTCLGRIEHIGQYEPYEF 1142
Query: 540 -TPEDARKLNLPPECVNK---TPSGETFVKSNLQKGILPEILEELLAARKRAKADLK--- 592
T K N + V K P G FVK ++ GILP +L E+L R K +K
Sbjct: 1143 GTTTLKIKKNTAQKLVGKINFAPCGVAFVKPEIRMGILPRMLSEILNTRLMIKNSMKLYG 1202
Query: 593 EAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKL 651
+ L++ +L +QL LK+ AN YG+T A G++PCIEI SV S GR+ +E K+
Sbjct: 1203 NDNNTLQR-ILYSQQLGLKLIANVTYGYTAANFSGRMPCIEIGDSVVSKGRETLERAIKI 1261
Query: 652 VE--DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKL 709
VE DK+ AEV+YGDTDS+ + + + A +G E AD I+ P+KL
Sbjct: 1262 VESTDKW--------GAEVVYGDTDSLFILLRGKSRKDAFIIGTEIADSITAVNPPPVKL 1313
Query: 710 EFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLHKIL 768
+FEK+ P +L +KKRY G + +PE+ + + KGIETVRRD C V ++ + L KIL
Sbjct: 1314 KFEKILQPAILQTKKRYCGYMYESPEQTNPEYLAKGIETVRRDGCPAVAKILEKTL-KIL 1372
Query: 769 VD-RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRK 825
D +D+ YV +L R+ + L K + + Y+ A +EL R+ +
Sbjct: 1373 FDIKDLSMVKLYVTRQFDKILRQRISIQDLTFAKEF-RGLNGYKTNACVPALELTRRLMR 1431
Query: 826 RDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLR 884
+D P G+RV YVI+ A + P+ V+ + + ++ YY+ I PL R
Sbjct: 1432 KDPRAIPRTGERVRYVIVAGAPNQPLIQCVRTPMEVISDEGLNPNSIYYITKVIIPPLNR 1491
Query: 885 IFEPI---LKNASKELLSGDHT-RSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCS 940
I + +E++ + ++I + T + ++ + C+ C + +C
Sbjct: 1492 CLNLINIDVNTWYREMIHRQTSDKTIDLCTNNQKLTIRQFFNTVVCVTCGNQ-TQKDICM 1550
Query: 941 HCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQK 1000
+C + + +++ LE L CQ C G L + C S DCP+ YR +A++
Sbjct: 1551 NCIAKPNQTITILYEKLRWLERTHHELTMICQSCTGYLDEPK-CESLDCPVLYRLMQAKR 1609
Query: 1001 DMAE 1004
D+ +
Sbjct: 1610 DLIQ 1613
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN-SKVP 177
IIRIFG T G C VHG PY YI C D S +++ G N +
Sbjct: 37 IIRIFGSTLSGIKTCLHVHGVFPYIYIPCTINNNVD--SFMYKLAAGIDSAINISLGSAM 94
Query: 178 QFVRHIEMVQKRS--IMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
++H+ +Q+ +Y +K F KI P ++ +L G+ L+ ++
Sbjct: 95 SNIQHVYKIQQVYGIPLYGYHEKKHLFFKIYFYNPAIIKRAADLLQNGMVLN----QTLQ 150
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRK 268
+E+++ F L+FMID N+ G + I + K+R+
Sbjct: 151 PHEAHIPFILQFMIDYNLYGMSLINLKDVKFRQ 183
>gi|330793739|ref|XP_003284940.1| hypothetical protein DICPUDRAFT_148772 [Dictyostelium purpureum]
gi|325085156|gb|EGC38569.1| hypothetical protein DICPUDRAFT_148772 [Dictyostelium purpureum]
Length = 2213
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 202/705 (28%), Positives = 325/705 (46%), Gaps = 85/705 (12%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLAVY 426
R VL WR E+ D N+C L +E+ + ++ + N + R R+ Y
Sbjct: 1501 RIVLNLWRILRHEITIDNYTYENLCYKVLNK--RQEEYSNEKLTQWYSDNRQ-RWRVLNY 1557
Query: 427 CLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI- 485
L+ LL FI E+ARV G+ ++SRG +V S LLR K N ++
Sbjct: 1558 NLRHVENNFNLLYSFDFIRKTSELARVYGIDFYSVVSRGSQYRVESMLLRLTKPDNFILL 1617
Query: 486 -PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---VTP 541
P ++ S+ V++ + Y P+ LDF SLYPSIM+AYN C+ST V P
Sbjct: 1618 SPTREEVMSQPMPESIPLVMDPLSRLYNSPVVVLDFQSLYPSIMIAYNYCFSTCLGRVDP 1677
Query: 542 ED--------ARKLNLPP--------ECVNKTPSGETFVKSNLQKGILPEILEELLAARK 585
D A L + P + + +P+ + K +++ GI P +L+E+L R
Sbjct: 1678 LDEINRKKFGASYLEMKPGLLESISLDNITISPNNVMYTKKSVRHGIFPRLLQEVLDTRI 1737
Query: 586 RAKADLKEA-KDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQ 643
K +K++ D ++L+ RQL LK+ AN +G+T AT G++PC+EI S+ R+
Sbjct: 1738 MVKRAMKKSSNDKKTYSILNARQLGLKMLANVAFGYTAATFSGRMPCVEIGDSIVQTARE 1797
Query: 644 MIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTF 703
+E K+VE E N +V+YGDTDS+ V + E + K+G++ AD ++
Sbjct: 1798 TLEAAIKIVE------SSKEWNGKVVYGDTDSLFVLLPGVSREESFKIGQKIADKVTSMN 1851
Query: 704 IKPIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLLVKNLVTE 762
P+KL FEKVY+P +L++KKRY G + +P +K D KGIETVRRD+C V ++ +
Sbjct: 1852 PAPVKLIFEKVYHPCILVNKKRYVGFKYESPDQKVPIFDAKGIETVRRDSCGAVSKILEK 1911
Query: 763 CLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKG--LTKTGDDYEVKAAHVELA 820
+ I +DI Y+ +L R +LS + +K L D+ + A + +
Sbjct: 1912 SIRIIFESKDISLVKSYITRQWEKILQERFNLSDFIFSKEVRLGTYKDETHLPPAAL-IG 1970
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN--IPIDTHYYLENQI 878
R+ K D P G+RV YV++ ++ + P LEN+ + I+ YY+ QI
Sbjct: 1971 TRLMKNDPRLEPRYGERVRYVVVYGEPNSRLIDLVLTPNEYLENSDRLRINVIYYITKQI 2030
Query: 879 SKPLLRIFE--------------------PILKNASKELLSGDHTRS-----ISISTPSN 913
L R+ + PI + + + + I I +N
Sbjct: 2031 IPALDRVLKVLNVNIKQWFNEQPKQLLLTPIQRMSKYYYFRNNQNKHQSRQPIQIQYENN 2090
Query: 914 S----GIMKFAKRQLSCIGCKALI----------------SNGTLCSHCKGREAELYCKT 953
I +F L+C+ C ++I +N +C +CK E Y
Sbjct: 2091 DHQNLTIDQFYS-TLNCLICSSVINNNNNNQVINTSSSMFNNLPICLNCKSDEQTSYFTL 2149
Query: 954 VSQVQELEVLFGRLWTQCQECQGSLHQDVL-CTSRDCPIFYRRKK 997
+++ + +E + C+ C D + C S DC F+ RKK
Sbjct: 2150 INRFKLIENQKNNINDFCKSCINDPSIDSIDCISLDCQTFFERKK 2194
>gi|30348512|emb|CAC84304.1| polmerase [Saimiriine herpesvirus 2]
Length = 1009
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 277/543 (51%), Gaps = 60/543 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L E R ++ +YC+ D+ L +LL M E+A++ +P
Sbjct: 457 KKEDVSYKDIMPLFMSGPEGRAKIGLYCVIDSVLVMKLLKFFMIHVEISEIAKLAKIPTR 516
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A+ +N ++P ++ ++GATV+ GFY + +D
Sbjct: 517 RVLTDGQQIRVFSCLLAAARAENYILPVSNDVNADG--FQGATVINPIPGFYNNAVLVVD 574
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETF---------VKSNLQK 570
FASLYPSI+ A+NLCYSTL+ P A N P K+ ETF VK ++Q
Sbjct: 575 FASLYPSIIQAHNLCYSTLI-PHHALH-NYPHL---KSSDYETFMLSSGPIHFVKKHIQT 629
Query: 571 GILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPC 630
+L +L L+ RK + L E +D K +LD +QLA+K++ N+VYGFTG G LPC
Sbjct: 630 SLLSRLLTVWLSKRKAIRQKLAECEDLDTKTILDKQQLAIKVTCNAVYGFTGVASGLLPC 689
Query: 631 IEISSSVTSYGRQMIEHTKKLVE----DKFTTVGGYEHNAE------VIYGDTDSVMVQF 680
I I+ +VT GR M+E +K +E D + ++ N E VIYGDTDS+ V+
Sbjct: 690 ISIAETVTLQGRTMLEKSKIFIEAMTPDTLQEIVPHKVNHEPDAKFRVIYGDTDSLFVEC 749
Query: 681 GVPTVEAAMKLGREAADYIS-GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
+V+ +K G A + S F PIKLE EK + LL++KKRY G+ DK
Sbjct: 750 VGYSVDTVVKFGDFLAAFTSEKLFNAPIKLESEKTFQCLLLLAKKRYIGILSN-----DK 804
Query: 740 MDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDL------------ 787
+ KG++ VR+ C V+N+ ++ L+ IL D ++ A Q + + D
Sbjct: 805 LLMKGVDLVRKTACKFVQNISSKILNLILKDPEVKAAAQLLSTKDPDYALREGLPDGFLK 864
Query: 788 ---LMNRMDLSL---------LVITKGLTKTGDDYEVK-AAHVELAERMRKRDAATAPNV 834
++N +L L + L++ Y+ + H+ + +++ R P V
Sbjct: 865 VIDILNESHKNLRTGQVPVEELTFSTELSRPISSYKTENLPHLTVYKKIITRHEE-PPQV 923
Query: 835 GDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNAS 894
DR+PYV + + +EDP Y ++NNIPI Y + I + I + + K++S
Sbjct: 924 HDRIPYVFVGKTTSCIS-NMAEDPTYTVQNNIPIAVDLYFDKLIHG-VANIIQCLFKDSS 981
Query: 895 KEL 897
K +
Sbjct: 982 KTV 984
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 150/325 (46%), Gaps = 41/325 (12%)
Query: 89 QSIMFQQLDIDYVIGDSNR----------ELLPLSSGSAAIIRIFGVTREGHSVCCKVHG 138
QSI F DI +R +++P + ++++ G T EG SVC V G
Sbjct: 86 QSITFHIYDIVETTYSEDRCNDIPFKFQTDIIP----NGTVLKLLGRTLEGASVCVNVFG 141
Query: 139 FEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQK 198
YFY+ P+G +I++ M++A P E V+K+ + Y ++
Sbjct: 142 QRNYFYVKVPEG---GNITYL-------MKQALNEKFSPSCAYQTEAVKKKILSRYDPKE 191
Query: 199 SQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNW 258
F V + ++ ++ G ++ +E+NV RF+ID N W
Sbjct: 192 HDVFKVTVSSSLSVYKISDSLVSNGCEV----------FETNVDAIRRFVIDNNFSTFGW 241
Query: 259 IEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHF 318
R T + S+ +EFDC Y D+ + ++ P+ I+SFDIEC G KG F
Sbjct: 242 YTCKSACPRITNRD-SHTDIEFDCGYYDL---EFHADRTEWPPYNIMSFDIECIGEKG-F 296
Query: 319 P--EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDF 376
P + D +IQ++ + G +++L +C+ + +V F +E D+L +
Sbjct: 297 PCAKNEEDLIIQISCVFWHAGTLDATRNMLLSLGTCSAVENTEVYEFPSEIDMLHGFFSL 356
Query: 377 IREVDPDVMIGYNICKFDLPYLIEK 401
IR+ + +++ GYNI FDLPYLI++
Sbjct: 357 IRDFNVEIITGYNISNFDLPYLIDR 381
>gi|321496564|ref|YP_004207849.1| DNA polymerase [Rodent herpesvirus Peru]
gi|320332466|gb|ADW24354.1| DNA polymerase [Rodent herpesvirus Peru]
gi|320332549|gb|ADW24436.1| DNA polymerase [Rodent herpesvirus Peru]
Length = 1019
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 274/519 (52%), Gaps = 57/519 (10%)
Query: 401 KEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMA---RVTGVP 457
KEDV + I L + R R+ YC+ D+ L +LD L + ++VE+A ++ +P
Sbjct: 463 KEDVSYKEIPTLFRRGPQERARVGKYCVMDSLL---VLDLLKYFMSHVEIAEIGKLAKIP 519
Query: 458 ISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIAT 517
+ +L+ GQ I+V S LL ++Q+ ++P+ +QG Y+GATV+ GFY PI
Sbjct: 520 LRRVLTDGQQIRVWSSLLDASRQEGYILPSCGTHDQQQG-YQGATVINPVPGFYNTPILV 578
Query: 518 LDFASLYPSIMMAYNLCYSTLVTPEDARKLNL-------PPECVNKTPSGETFVKSNLQK 570
+DFASLYPSI+ A+NLCYST++ E KL+L + N FVK + ++
Sbjct: 579 VDFASLYPSIIQAHNLCYSTIIPHE---KLSLYHDLQATDYDTFNLASGPVHFVKPHKKE 635
Query: 571 GILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPC 630
+L +L + LA RK + ++ D K +LD +QLA+K++ NSVYGFTG G LPC
Sbjct: 636 SVLSRLLTKWLAKRKEIRKEMANCTDETHKTILDKQQLAIKLTCNSVYGFTGVASGLLPC 695
Query: 631 IEISSSVTSYGRQMIEHTKKLVED----KFTTVGGYEHNA----EVIYGDTDSVMVQFGV 682
++I+ +VT GRQM+E +K +E+ + G ++ +VIYGDTDS+ ++
Sbjct: 696 LKIAETVTYRGRQMLEESKAFIENITPITLQEITGTAYSMSGTFQVIYGDTDSLFIKCEN 755
Query: 683 PTVEAAMKLGREAADYISGTFIK-PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
+++ + + AD ++ + PIKLE EK + L+I+KKRY G+ +N ++
Sbjct: 756 YSLDEVLDFCEKLADRVTKELFRPPIKLEAEKTFKSLLMIAKKRYIGI-LSNSKRL---- 810
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------V 777
KG++ VR+ C+ V+ + + IL D D A +
Sbjct: 811 MKGVDLVRKTACIFVQEKTSSIVDLILHDPDAKEAAQEISRCPKDHSYKSGLPSGFSKII 870
Query: 778 QYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA-AHVELAERMRKRDAATAPNVGD 836
Q + S+++ L+ + + L T L++ +Y+ + H+ + +++ R P + D
Sbjct: 871 QALNSSLNQLVCAEIPIEKLTFTNELSRPLSEYKTQTLPHLIVYKKLASRQEE-LPQIHD 929
Query: 837 RVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLE 875
R+PYV ++ +K +E P YV+++ +PI Y +
Sbjct: 930 RIPYVYVEGSKKDLKSSLAEHPAYVVQHRVPIAHEVYFD 968
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 148/316 (46%), Gaps = 38/316 (12%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
S +IR+ G +G +VC V G YFY+ P + + +++ M E +R
Sbjct: 124 SGTVIRLLGRLEDGTTVCVNVFGQLLYFYVQAPNAL------YISSLIQNVMAE-HRGRG 176
Query: 176 VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALP-TMVASCRGILDRGIQLDGLGMKSF 234
P F I +K + Y ++ F K+ ++ P + C + + G +L
Sbjct: 177 GPSFT--ISPEKKIPLTEYCEEAETVF-KVTMSSPIALFPICAKLREAGCKL-------- 225
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEG 294
+E+NV RF+ID W R+ K S Q+E DC +D+
Sbjct: 226 --FETNVDATQRFLIDRGFTTFGWFRCVNASVRQCGKD-SRAQIEVDCSVNDLEYLPDRL 282
Query: 295 EFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLV--TLQGEKQPFIRNVMTLK 350
++ P+ IL+FDIEC G G FP T++P +IQ++ + TL Q + ++++
Sbjct: 283 DW---PPYNILAFDIECVGESG-FPCHTNEPDQIIQISCVFWNTLHKTTQ---KTLLSIG 335
Query: 351 SCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSI-- 408
+CAP+ + F +E D+L+ + +R+ D + + GYNI FDLPY+I + + ++I
Sbjct: 336 TCAPLDDTTIYEFPSEFDMLMGFLGLLRDGDIEFITGYNISNFDLPYIINRATLLYNINC 395
Query: 409 ---ISDLQNGNAETRR 421
L+N E R+
Sbjct: 396 GQYCKVLKNSTFEVRQ 411
>gi|392858787|gb|AFM85236.1| DNA polymerase [Myotis ricketti herpesvirus 2]
Length = 1008
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 272/536 (50%), Gaps = 52/536 (9%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R +L +YC+KD+ L LL M E+A++ +P
Sbjct: 465 QKEDVSYRDIPHLFRDGPGGRSKLGLYCVKDSVLVLDLLKYFMTHIEISEIAKIAKIPTR 524
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A+++N ++P SE TY+GATV+ GFY P+ +D
Sbjct: 525 RVLTDGQQIRVFSCLLEVARRENYILP--VNHNSESDTYQGATVINPIPGFYNTPVLVVD 582
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKL--NLPP---ECVNKTPSGETFVKSNLQKGILP 574
FASLYP+I+ +NLCYST++ P+ L +L P E + FVK + +L
Sbjct: 583 FASLYPTIIQGHNLCYSTII-PDGQLHLHSDLKPGDYETFELSSGVVHFVKKHKAVSLLA 641
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
+L LA RK + L DP + +LD +QLA+K++ N+VYGFTG G LPC++I+
Sbjct: 642 TLLNVWLAKRKSIRKTLATVSDPSTRTILDKQQLAIKVTCNAVYGFTGVASGILPCLKIA 701
Query: 635 SSVTSYGRQMIEHTKKLVE----DKFTTV--GGYEHNA----EVIYGDTDSVMVQFGVPT 684
+VT GR+M+E +K+ +E D + + G H+ VIYGDTDS+ ++
Sbjct: 702 ETVTFQGRRMLEKSKEYIESLTPDMLSHIIQGPVNHSPGASFRVIYGDTDSLFIECRGYQ 761
Query: 685 VEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTK 743
E M A +++ T F+ PIKLE EK + +L++KKRY G+ T DK+ K
Sbjct: 762 SEEVMSFCDRLASHVTDTLFVDPIKLEAEKTFKCLILLTKKRYIGMMTT-----DKLLMK 816
Query: 744 GIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------VQY 779
G++ VR+ C V+N L ++ + + A +
Sbjct: 817 GVDLVRKTACKFVQNTTRSILDLVMQNEKVKEAACVLCSKKVNDIYKQGLPPDFLQVIDV 876
Query: 780 VKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAH-VELAERMRKRDAATAPNVGDRV 838
+ + L N++ ++ L + L++ Y+ H + L ++MR + + DR+
Sbjct: 877 LNYSYKQLKNNQVPINHLSFSTELSRPISYYKTLTPHMLALNKKMRLTNEQLH-QIHDRI 935
Query: 839 PYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNAS 894
PYV I+ K+ E +EDP YV +NN+P+ Y + I + I + + +N S
Sbjct: 936 PYVFIETTCKLKS-EMAEDPAYVAQNNVPLAVDLYFDKVIHG-VANILQCLFENDS 989
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 26/288 (9%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK 175
S ++++ G T+E +SVC V + YFY+ P G+ D I Q + G+ +++ +
Sbjct: 126 SGTVLKLLGRTQENYSVCVNVFRQQLYFYVMVPDGLNLDFI--IQQTIRGQFGKSSCSYT 183
Query: 176 VPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFM 235
+K+ + Y ++ + F + S G +D + + L
Sbjct: 184 -------FSPTRKKILREYSTEEYEVF--------QVFLSSHGPMD--LLSERLVAAGCE 226
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGE 295
+E+NV RF++D N W R + S+ LEFDC D+ E
Sbjct: 227 VFETNVDATRRFILDHNFSTFGWYHCTSAIPRIRDRD-SWTDLEFDCSVDDL---KFFSE 282
Query: 296 FSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLVTLQGEKQPFIRNVMTLKSCA 353
+ ++I+SFDIEC G G FP P D ++Q++ ++ G Q ++ + +C
Sbjct: 283 RTDWPEYQIMSFDIECIGECG-FPNPIRDEDMILQISCVLWSVGSSQRPKNILLNVGTCD 341
Query: 354 PIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
P+ +V +E D+L + IR+ D + + GYNI FD PY+I++
Sbjct: 342 PVEDTEVYECPSELDMLYLFFTLIRDFDVEFVTGYNISNFDFPYIIDR 389
>gi|393240252|gb|EJD47779.1| hypothetical protein AURDEDRAFT_144423 [Auricularia delicata
TFB-10046 SS5]
Length = 1503
Score = 250 bits (638), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 184/602 (30%), Positives = 279/602 (46%), Gaps = 47/602 (7%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
+LD+ I + E ARV G+ +SRG KV S L R K ++ VI P+ + G +
Sbjct: 890 ILDETETITKHAESARVFGIDFFSSISRGSQYKVESFLFRIGKPESFVILSPSGDEVGHQ 949
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL--------------VT 540
Y +LE A +Y P+ LDF SLYPSIM+AYN CYST V
Sbjct: 950 NAIYATPLILEPFAAYYSSPLVVLDFQSLYPSIMIAYNYCYSTCLGRVEQQNGHWKLGVL 1009
Query: 541 PEDARKLNLPP-------ECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKE 593
PE LPP + VN P+G + K ++ G+L +L+ELL R K +K
Sbjct: 1010 PE----FELPPGLLGKLEDHVNVAPNGIMYAKKEVRPGLLGRMLQELLDTRIMVKQAMKS 1065
Query: 594 AK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKL 651
+K D LD RQL+LK N YG+T AT G++P +EI+ S+ GR+ ++ +
Sbjct: 1066 SKGDKGLYRTLDARQLSLKFICNVTYGYTSATFSGRMPAVEIADSIVQSGRETLDQAIRT 1125
Query: 652 VEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEF 711
+++ T+ G A V+YGDTDS+ + T E A ++G + AD I+ PIKL+F
Sbjct: 1126 IQN--TSKWG----ATVVYGDTDSLFIYLPGRTKEQAFRIGHDIADTITAMNPDPIKLKF 1179
Query: 712 EKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
EKVY P +L++KKRY G + +P++ + D KGIETVRRD + + + +
Sbjct: 1180 EKVYLPSVLMTKKRYVGFKYEHPDELEPSFDAKGIETVRRDGTPATQKMQETVIKMLFRT 1239
Query: 771 RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL---TKTGDDYEVKAAHVELAERMRKRD 827
+D+ Y + T +L R L + K + T + D V +A R + D
Sbjct: 1240 QDLSAIKSYCERTWYKILEGRAQLQDFIFAKEVRMGTYSAD--HPPPPGVMVAARQQLED 1297
Query: 828 AATAPNVGDRVPYVII-KAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIF 886
DRV YVI + G + RS P L+ + +D YY+E + PL R+
Sbjct: 1298 PNNEVQYADRVKYVIPQRNVPGERLVNRSISPQEFLQLGLDLDAEYYIERMLIPPLQRVL 1357
Query: 887 EPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL-ISNGTLCSHC 942
+ +K E+ R + + + + CI C+A N +C C
Sbjct: 1358 SLVGVDIKKWYIEMAKPQRARRKELRDGTARSKIDAHFKSAQCIVCRATGFLNHGVCQDC 1417
Query: 943 KGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRKKAQKD 1001
+ + +V+ E C C G + +++ C S DC F+ R K +
Sbjct: 1418 LHAPSTSIYRLERRVRARETKQTSAHLVCVTCTGCAPGEEIKCDSLDCAWFFERHKLADE 1477
Query: 1002 MA 1003
A
Sbjct: 1478 AA 1479
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF-HQILEGRMREANRNSKVP 177
IIR+FG T G C +H PYF++S P P + + H + G K+P
Sbjct: 35 IIRVFGTTDGGVPACVHLHQLYPYFFVSYPGDTDPRTVQEYLHNLRRGINHALALQMKLP 94
Query: 178 Q------FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
+V+ I +V K Y PFLKI + P++V C L G +
Sbjct: 95 PNSPKAYYVKRIILV-KGVDFYGFHSGYTPFLKIYLYDPSLVTRCVTALRTG----SIMR 149
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEV 261
F YES+ +F + M D + G NW+E+
Sbjct: 150 TRFTIYESHHVFKDQVMCDFALYGCNWLEL 179
>gi|44491811|gb|AAS47484.1| DNA polymerase [Murid herpesvirus 4]
Length = 1094
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 172/565 (30%), Positives = 273/565 (48%), Gaps = 87/565 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT---------------------- 497
++ GQ I++ + LL + ++L++P + G E
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDLILPTMPSLGDETAAAIEAAGEGDETSEGENSNNSRT 597
Query: 498 --YEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DARKLN 548
Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D ++
Sbjct: 598 VGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVLRVE 657
Query: 549 LPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQL 608
+ +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D +QL
Sbjct: 658 IGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDKQQL 710
Query: 609 ALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTVGGY 662
ALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV G
Sbjct: 711 ALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTVLGL 770
Query: 663 EHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLEFEK 713
A ++IYGDTDSV F EA +K +G AA+ + F +P++LEFEK
Sbjct: 771 PPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLEFEK 830
Query: 714 VYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D +
Sbjct: 831 MFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFNDETV 886
Query: 774 P-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA----------------- 815
G ++ + T DL N + + L + DD +K
Sbjct: 887 SEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQELSC 946
Query: 816 -------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVLENN 865
H+ + R+ R P VGDRV YV+ K YE +EDP +V+E
Sbjct: 947 YKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVVEAK 1005
Query: 866 IPIDTHYYLENQISKPLLRIFEPIL 890
+ I+ Y E Q+ K + P+
Sbjct: 1006 LSINAEKYYE-QVVKAVTNTLMPVF 1029
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 148/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RARGWCRGPFP-------DELHFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG S+C V G + YFY C + D + + I + VP+ F
Sbjct: 130 ATEEGVSICVNVFGQKAYFY--CERTQSEDLKNIVYDIAD----------TVPEPRSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMVE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W V + A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDKKIPSFGWC-VARRYSVRAAGHVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|302306271|ref|NP_982443.2| AAL099Cp [Ashbya gossypii ATCC 10895]
gi|299788440|gb|AAS50267.2| AAL099Cp [Ashbya gossypii ATCC 10895]
Length = 1464
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 197/682 (28%), Positives = 319/682 (46%), Gaps = 67/682 (9%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK--EDVHHSIISDLQNGNAETRRRLA 424
R +L WR EV+ + YNI L E+ + H ++ + + T ++
Sbjct: 780 RHMLNVWRKMRTEVN---LAKYNIENVAYHLLHERLPKFTHETLSGFWRTKSDRTSIKIV 836
Query: 425 V-YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL 483
+ YCL+ RLL+ I VE AR+ G+ +LSRG +V S L R AK ++L
Sbjct: 837 INYCLERVRCNIRLLNLKQVISRTVEQARLIGIDFYSVLSRGSQYRVESVLARLAKAEHL 896
Query: 484 VI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV-- 539
++ P ++ +LE FY P+ LDF SLYPSI++AYN CY+T++
Sbjct: 897 MLISPGKGDLRHQRALECVPLILEPDPTFYTSPVLVLDFQSLYPSIIIAYNYCYTTILGR 956
Query: 540 TPE---------------DARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAAR 584
T E L L + + P+G T+VK N++K IL ++L ++L R
Sbjct: 957 TREMTAGENKIGITTNILKPNILQLLGDNITIAPNGVTYVKQNIRKSILAKMLSDILDTR 1016
Query: 585 ---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
KR +D+ L + LD RQLALK+ AN YG+ A+ G++PC +I+ S+
Sbjct: 1017 VLLKRTISDMHNGSKRL-LSTLDNRQLALKLLANVTYGYASASYSGRMPCSDIADSIVHT 1075
Query: 641 GRQMIEHTKKLVE--DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
GR+ + +++E DK+ A V+YGDTDS+ V + E A K+G +D
Sbjct: 1076 GRETLRAAIQMIEKEDKW--------GARVVYGDTDSLFVHLPGKSREQAFKIGAAISDA 1127
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
++ PIKL+FEKVY+P +L+SKKRY G Y ++ + D KGIETVRRD +
Sbjct: 1128 VTAANPNPIKLKFEKVYHPCILLSKKRYVGHAYEHASQEVPRYDAKGIETVRRDGHPAQR 1187
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVK 813
++ L + +D+ Y+ + ++ + + +K G K+
Sbjct: 1188 KIIQRSLEILFRTKDLSQLKAYIVNQFWKIMTGSVPIGDFCFSKEVRLGFYKSE---AAA 1244
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPI-YVLENNIPIDTHY 872
++A RM + D+ P +RV YV+ K+ G +R P ++ + + +D Y
Sbjct: 1245 PPAAQVARRMMENDSMAEPQYRERVSYVVAKSRPGTLLADRCIAPQDFLADPRLELDAEY 1304
Query: 873 YLENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGC 929
Y+ + PL R+ + + L + +E+ + + S + + C+ C
Sbjct: 1305 YITKTLIPPLNRLLQTVGLDLFDWYREMPRPSSYKHVGSGA---SDTLHHVLKSNRCLCC 1361
Query: 930 K--ALISNG-TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVL--- 983
K A NG LC C+ +E + + E F R C+ C L +D+L
Sbjct: 1362 KREATTKNGLQLCDSCRTSPSESSVALLLDRRTRESRFNRALRACRVCCFPLTKDLLAAP 1421
Query: 984 ------CTSRDCPIFYRRKKAQ 999
C + DCP+FY RKK +
Sbjct: 1422 EIGPNQCQAHDCPVFYTRKKYE 1443
>gi|374105641|gb|AEY94552.1| FAAL099Cp [Ashbya gossypii FDAG1]
Length = 1464
Score = 249 bits (637), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 197/682 (28%), Positives = 319/682 (46%), Gaps = 67/682 (9%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK--EDVHHSIISDLQNGNAETRRRLA 424
R +L WR EV+ + YNI L E+ + H ++ + + T ++
Sbjct: 780 RHMLNVWRKMRTEVN---LAKYNIENVAYHLLHERLPKFTHETLSGFWRTKSDRTSIKIV 836
Query: 425 V-YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL 483
+ YCL+ RLL+ I VE AR+ G+ +LSRG +V S L R AK ++L
Sbjct: 837 INYCLERVRCNIRLLNLKQVISRTVEQARLIGIDFYSVLSRGSQYRVESVLARLAKAEHL 896
Query: 484 VI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV-- 539
++ P ++ +LE FY P+ LDF SLYPSI++AYN CY+T++
Sbjct: 897 MLISPGKGDLRHQRALECVPLILEPDPTFYTSPVLVLDFQSLYPSIIIAYNYCYTTILGR 956
Query: 540 TPE---------------DARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAAR 584
T E L L + + P+G T+VK N++K IL ++L ++L R
Sbjct: 957 TREMTAGENKIGITTNILKPNILQLLGDNITIAPNGVTYVKQNIRKSILAKMLSDILDTR 1016
Query: 585 ---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
KR +D+ L + LD RQLALK+ AN YG+ A+ G++PC +I+ S+
Sbjct: 1017 VLLKRTISDMHNGSKRL-LSTLDNRQLALKLLANVTYGYASASYSGRMPCSDIADSIVHT 1075
Query: 641 GRQMIEHTKKLVE--DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
GR+ + +++E DK+ A V+YGDTDS+ V + E A K+G +D
Sbjct: 1076 GRETLRAAIQMIEKEDKW--------GARVVYGDTDSLFVHLPGKSREQAFKIGAAISDA 1127
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVK 757
++ PIKL+FEKVY+P +L+SKKRY G Y ++ + D KGIETVRRD +
Sbjct: 1128 VTAANPNPIKLKFEKVYHPCILLSKKRYVGHAYEHASQEVPRYDAKGIETVRRDGHPAQR 1187
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVK 813
++ L + +D+ Y+ + ++ + + +K G K+
Sbjct: 1188 KIIQRSLEILFRTKDLSQLKAYIVNQFWKIMTGSVPIGDFCFSKEVRLGFYKSE---AAA 1244
Query: 814 AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPI-YVLENNIPIDTHY 872
++A RM + D+ P +RV YV+ K+ G +R P ++ + + +D Y
Sbjct: 1245 PPAAQVARRMMENDSMAEPQYRERVSYVVAKSRPGTLLADRCIAPQDFLADPRLELDAEY 1304
Query: 873 YLENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGC 929
Y+ + PL R+ + + L + +E+ + + S + + C+ C
Sbjct: 1305 YITKTLIPPLNRLLQTVGLDLFDWYREMPRPSSYKHVGSGA---SDTLHHVLKSNRCLCC 1361
Query: 930 K--ALISNG-TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVL--- 983
K A NG LC C+ +E + + E F R C+ C L +D+L
Sbjct: 1362 KREATTKNGLQLCDSCRTSPSESSVALLLDRRTRESRFNRALRACRVCCFPLTKDLLAAP 1421
Query: 984 ------CTSRDCPIFYRRKKAQ 999
C + DCP+FY RKK +
Sbjct: 1422 EIGPNQCQAHDCPVFYTRKKYE 1443
>gi|44491801|gb|AAS47479.1| DNA polymerase [Murid herpesvirus 4]
Length = 1094
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 172/565 (30%), Positives = 273/565 (48%), Gaps = 87/565 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT---------------------- 497
++ GQ I++ + LL + ++L++P + G E
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDLILPTMPSLGDETAAAIEAAGEGDETSEGENSNNSRT 597
Query: 498 --YEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DARKLN 548
Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D ++
Sbjct: 598 VGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVLRVE 657
Query: 549 LPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQL 608
+ +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D +QL
Sbjct: 658 IGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDKQQL 710
Query: 609 ALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTVGGY 662
ALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV G
Sbjct: 711 ALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTVLGL 770
Query: 663 EHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLEFEK 713
A ++IYGDTDSV F EA +K +G AA+ + F +P++LEFEK
Sbjct: 771 PPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLEFEK 830
Query: 714 VYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D +
Sbjct: 831 MFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFNDETV 886
Query: 774 P-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA----------------- 815
G ++ + T DL N + + L + DD +K
Sbjct: 887 SEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQELSC 946
Query: 816 -------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVLENN 865
H+ + R+ R P VGDRV YV+ K YE +EDP +V+E
Sbjct: 947 YKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVVEAK 1005
Query: 866 IPIDTHYYLENQISKPLLRIFEPIL 890
+ I+ Y E Q+ K + P+
Sbjct: 1006 LSINAEKYYE-QVVKAVTNTLMPVF 1029
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 148/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P S +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPSGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + VP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERTQSEDLKNIVYDIAD----------TVPEPRSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMVE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W V + A +S QLE DC +DI+ P E +
Sbjct: 229 VDPLARFLIDKKIPSFGWC-VARRYSVRAAGHVSRAQLEIDCDVADIL---PIEEQTNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVSHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDTKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|321248956|ref|XP_003191299.1| zeta DNA polymerase [Cryptococcus gattii WM276]
gi|317457766|gb|ADV19512.1| zeta DNA polymerase, putative [Cryptococcus gattii WM276]
Length = 1991
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 182/625 (29%), Positives = 304/625 (48%), Gaps = 56/625 (8%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y + + +LD+ I E ARV G+ + +L+RG KV S + R AK ++ V+
Sbjct: 1353 YFFQRTVMCMEILDQAEIITKTAEFARVFGIDFASVLTRGSQYKVESFIFRIAKPESFVL 1412
Query: 486 --PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPED 543
P+ +Q G + + + E + +Y PI LDF SLYPSIM+AYN+CYST + +
Sbjct: 1413 VSPSKQQVGLQNAPFSVPLIAEPESKYYTHPIIVLDFQSLYPSIMIAYNICYSTCLGRVE 1472
Query: 544 ARK----------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
K L L + + TP+G FVK ++K +L ++L E+L R
Sbjct: 1473 MFKGTNKFGFTNLKVADGLLELLKDYLTVTPNGMIFVKPAVRKSLLAKMLVEILDTRVMI 1532
Query: 588 KADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K +K A+D A+ + RQL LK+ AN YG+T AT G++PCIEI+ S+ GR+ +
Sbjct: 1533 KHAMKGARDDKSLTAMHNARQLGLKLMANVTYGYTSATYSGRMPCIEIADSIVQTGRETL 1592
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E ++L+ + +A V+YGDTDS+ V + E A K+G + AD ++ K
Sbjct: 1593 EKAQELIH------SCADWDARVVYGDTDSLFVALPGRSKEQAFKIGYDIADAVTALNPK 1646
Query: 706 PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY +L++KKRY G + +P++ + D KGIET+RRD + + CL
Sbjct: 1647 PVKLKFEKVYMGSVLMAKKRYVGFKYEHPDETEPSFDAKGIETIRRDGFPAQQKMEEVCL 1706
Query: 765 HKILV-DRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAER 822
+++L +D+ ++ + +L + + +I K + T + V +A R
Sbjct: 1707 NRLLFRTQDLSKVKEFCLREWTKILQGHVSIQDFIIAKEVRLGTYSEKGVPPPGAAVAYR 1766
Query: 823 MRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKP 881
+D P +RVPY +I A G + +R+ P +L N ++ IDT YY+ N + P
Sbjct: 1767 RILKDPRDEPQYAERVPY-LISNADGRRLIDRARMPEELLSNRSLSIDTEYYIRNLLIPP 1825
Query: 882 LLRIFE-------------PILKNASK------ELLSGDHTRSISISTPSNSGIMKFAKR 922
L RIF P K K ++ + H + T + + +
Sbjct: 1826 LSRIFNLVGADVEEWYDSMPKTKRLGKYDKVGGQMANKGHGKGKPGRTKGSGSRIDSHFK 1885
Query: 923 QLSCIGCKALISNGTLCSHCKGREAELYCKTVSQV---QELEVLFGRLWTQCQECQGSLH 979
C+ C + S LC C+ + +S++ Q+ + R+ C +
Sbjct: 1886 SSHCVVC-GIESADVLCHPCRLDPSTTSHALLSRLHIAQDKRIALQRICASCSSVPPA-- 1942
Query: 980 QDVLCTSRDCPIFYRRKKAQKDMAE 1004
+ ++C S DCP + R ++++ +
Sbjct: 1943 EKIMCDSIDCPNTFARVAVEREVED 1967
>gi|6325090|ref|NP_015158.1| Rev3p [Saccharomyces cerevisiae S288c]
gi|118901|sp|P14284.1|DPOZ_YEAST RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3
gi|172387|gb|AAA34968.1| DNA polymerase (pot.); putative [Saccharomyces cerevisiae]
gi|1370353|emb|CAA97873.1| REV3 [Saccharomyces cerevisiae]
gi|1403542|emb|CAA65554.1| P2535 protein [Saccharomyces cerevisiae]
gi|285815375|tpg|DAA11267.1| TPA: Rev3p [Saccharomyces cerevisiae S288c]
gi|392295841|gb|EIW06944.1| Rev3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1504
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 194/701 (27%), Positives = 323/701 (46%), Gaps = 68/701 (9%)
Query: 365 TERDVLLAWRDFIREVDPDVMI----GYNICKFDLPYLIEKEDVHHSIISDLQNGNAETR 420
T R ++ WR +V+ +NI LP+ ++++ N T
Sbjct: 819 TGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHF------SFESLTNMWNAKKSTT 872
Query: 421 RRLAV--YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKA 478
V Y L A + +LL K +I +E AR+ G+ + RG KV S L+R
Sbjct: 873 ELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRIC 932
Query: 479 KQKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYS 536
K ++ ++ P K ++ V+E + FY+ P+ LDF SLYPSIM+ YN CYS
Sbjct: 933 KSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCYS 992
Query: 537 TLV--------TPED--ARKLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEE 579
T++ T + K +LP V P+G + K++++K L ++L +
Sbjct: 993 TMIGRVREINLTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKMLTD 1052
Query: 580 LLAARKRAKADLKEAKD--PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSS 636
+L R K + E D K +L+ +QLALK+ AN YG+T A+ G++PC +++ S
Sbjct: 1053 ILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSASFSGRMPCSDLADS 1112
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+ GR+ +E ++E T NA+V+YGDTDS+ V T A +G A
Sbjct: 1113 IVQTGRETLEKAIDIIEKDET------WNAKVVYGDTDSLFVYLPGKTAIEAFSIGHAMA 1166
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLL 755
+ ++ KPI L+FEKVY+P +LISKKRY G + +P + D KGIETVRRD
Sbjct: 1167 ERVTQNNPKPIFLKFEKVYHPSILISKKRYVGFSYESPSQTLPIFDAKGIETVRRDGIPA 1226
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA- 814
+ ++ +C+ + +D+ +Y+++ + + ++ K + E A
Sbjct: 1227 QQKIIEKCIRLLFQTKDLSKIKKYLQNEFFKIQIGKVSAQDFCFAKEVKLGAYKSEKTAP 1286
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYY 873
A + +R D P +R+PY+++K +G ER P LE N+ +D+ YY
Sbjct: 1287 AGAVVVKRRINEDHRAEPQYKERIPYLVVKGKQGQLLRERCVSPEEFLEGENLELDSEYY 1346
Query: 874 LENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK 930
+ + PL R+F I + N ++E++ ++ S +T I + C +
Sbjct: 1347 INKILIPPLDRLFNLIGINVGNWAQEIVK---SKRASTTTTKVENITRVGTSATCCNCGE 1403
Query: 931 AL--ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV------ 982
L I + LC C + + + + + + + L T C+ C D
Sbjct: 1404 ELTKICSLQLCDDCLEKRSTTTLSFLIKKLKRQKEYQTLKTVCRTCSYRYTSDAGIENDH 1463
Query: 983 ---LCTSRDCPIFYRRKKAQKDM--------AEAKLQLDRW 1012
C S DCP+FY R KA++ + EA + L+ W
Sbjct: 1464 IASKCNSYDCPVFYSRVKAERYLRDNQSVQREEALISLNDW 1504
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 105 SNRELLPLSSGSAA-IIRIFGVTREGHSVCCKVHGFEPYFYISCP-QGMGPDDISH---- 158
S+ E LPL+ S IR+FG GH V C VHG PY +I Q + H
Sbjct: 43 SHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPYMFIKYDGQITDTSTLRHQRCA 102
Query: 159 -FHQILEGRMREANRNSKVPQ------------FVRHIEMVQKRSIMYYQQQKS-QPFLK 204
H+ LE ++R + + K + FV + +V + I +Y F K
Sbjct: 103 QVHKTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVV--KGIPFYGYHVGWNLFYK 160
Query: 205 IVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVG 264
I + P SC + I+ + K F YES++ + L++ D N+ G +WI V
Sbjct: 161 ISLLNP----SCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINVDRC 216
Query: 265 KYR 267
+R
Sbjct: 217 YFR 219
>gi|294655851|ref|XP_458050.2| DEHA2C08558p [Debaryomyces hansenii CBS767]
gi|199430655|emb|CAG86117.2| DEHA2C08558p [Debaryomyces hansenii CBS767]
Length = 1588
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 201/641 (31%), Positives = 314/641 (48%), Gaps = 76/641 (11%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L+ L +++D I VE +R+ G+ + RG KV S L R K +N+++
Sbjct: 958 YYLRRVQLIMKIIDIQELITRNVEQSRLIGIDFNSNFYRGSQFKVESILCRLTKAENILL 1017
Query: 486 PNV-KQAGSEQGTYEG-ATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---- 539
+V KQ E E ++E + FY+ P+ LDF SLYPSIM+AYN CYST++
Sbjct: 1018 NSVSKQQVHEMRPLECIPLIMEPDSNFYKSPLIVLDFQSLYPSIMIAYNYCYSTILGKLH 1077
Query: 540 --TPEDA-----RKLNLPPECV---------NKTPSGETFVKSNLQKGILPEILEELLAA 583
+P + L LPP V N +P+G FVKS+++K +L ++LEE+L A
Sbjct: 1078 GFSPRKNIIGYLKNLKLPPGLVDLFAKNDGLNISPNGYVFVKSSIRKSMLAKMLEEILNA 1137
Query: 584 RKRAKADLKEAKDPLEKAVL-DGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K KD E L + RQLALK+ AN YG+T AT G++P +I+ ++ S G
Sbjct: 1138 RINVKSVMKLFKDDPELIKLYNSRQLALKLIANVTYGYTSATFSGRMPNSDIADAIVSTG 1197
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+++ + L+E T G A+V+YGDTDS+ V T + A K+G E A +I+
Sbjct: 1198 REILSQSVNLIES--TNYG-----AKVVYGDTDSLFVYLPGKTKQDAFKIGNELASFITD 1250
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLV 760
F PIKL+FEKVY+P +L++KKRY G Y ++ K D KGIET+RRD + +V
Sbjct: 1251 KFPDPIKLKFEKVYHPCVLLAKKRYVGYSYEYEDQQEPKFDAKGIETIRRDGIPAQQKMV 1310
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE-- 818
+ + + +++ +Y +L+N++ + K + E AH+
Sbjct: 1311 EKTIRILFDTKNLSLIKKYTMEQFYKILINKVSIKDFCFAKEVRFGTYKNE---AHLPPG 1367
Query: 819 --LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERS---EDPI--YVLENNIPIDTH 871
+A R +D P +RVPYV+ + + + +R ED I Y + +D
Sbjct: 1368 AIVANRNVNKDPRNEPQYRERVPYVVFQDSSKIRVKDRCISPEDFIKSYNTSKPLSLDNE 1427
Query: 872 YYLENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAK--RQLSC 926
YY+ + PL R+F I +K KEL +H T +N I +FAK + SC
Sbjct: 1428 YYITRVLIPPLERVFNLIGVDIKGWYKELPKFNHEL---FETKNN--IFQFAKFIKLNSC 1482
Query: 927 IGC----KALISNGTLCSHCKGREAELYCK--TVSQVQELEVLFGRLWTQCQECQGSLHQ 980
C K + +C C E EL S+ E + L C+ C ++
Sbjct: 1483 ACCGSKLKEYSRSKYICGQCLNNELELIANLSMSSKFGEFKELVAD--KTCELCVNMNYE 1540
Query: 981 DV----------LCTSRDCPIFYRRKKAQKDMAEAKLQLDR 1011
+ C + C ++Y + + K+ K+QLD+
Sbjct: 1541 SLGSRTIRNCMNECVNNSCSVYYNKIRVTKE----KVQLDQ 1577
>gi|256274231|gb|EEU09139.1| Rev3p [Saccharomyces cerevisiae JAY291]
Length = 1504
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 194/701 (27%), Positives = 323/701 (46%), Gaps = 68/701 (9%)
Query: 365 TERDVLLAWRDFIREVDPDVMI----GYNICKFDLPYLIEKEDVHHSIISDLQNGNAETR 420
T R ++ WR +V+ +NI LP+ ++++ N T
Sbjct: 819 TGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHF------SFESLTNMWNAKKSTT 872
Query: 421 RRLAV--YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKA 478
V Y L A + +LL K +I +E AR+ G+ + RG KV S L+R
Sbjct: 873 ELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRIC 932
Query: 479 KQKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYS 536
K ++ ++ P K ++ V+E + FY+ P+ LDF SLYPSIM+ YN CYS
Sbjct: 933 KSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCYS 992
Query: 537 TLV--------TPED--ARKLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEE 579
T++ T + K +LP V P+G + K++++K L ++L +
Sbjct: 993 TMIGRVREINLTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKMLTD 1052
Query: 580 LLAARKRAKADLKEAKD--PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSS 636
+L R K + E D K +L+ +QLALK+ AN YG+T A+ G++PC +++ S
Sbjct: 1053 ILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSASFSGRMPCSDLADS 1112
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+ GR+ +E ++E T NA+V+YGDTDS+ V T A +G A
Sbjct: 1113 IVQTGRETLEKAIDIIEKDET------WNAKVVYGDTDSLFVYLPGKTAIEAFSIGHAMA 1166
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLL 755
+ ++ KPI L+FEKVY+P +LISKKRY G + +P + D KGIETVRRD
Sbjct: 1167 ERVTQNNPKPIFLKFEKVYHPSILISKKRYVGFSYESPSQTLPIFDAKGIETVRRDGIPA 1226
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA- 814
+ ++ +C+ + +D+ +Y+++ + + ++ K + E A
Sbjct: 1227 QQKIIEKCIRLLFQTKDLSKIKKYLQNEFFKIQIGKVSAQDFCFAKEVKLGAYKSEKTAP 1286
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYY 873
A + +R D P +R+PY+++K +G ER P LE N+ +D+ YY
Sbjct: 1287 AGAVVVKRRINEDHRAEPQYKERIPYLVVKGKQGQLLRERCVSPEEFLEGENLELDSEYY 1346
Query: 874 LENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK 930
+ + PL R+F I + N ++E++ ++ S +T I + C +
Sbjct: 1347 INKILIPPLDRLFNLIGINVGNWAREIVK---SKRASTTTTKVENITRVGTSATCCNCGE 1403
Query: 931 AL--ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV------ 982
L I + LC C + + + + + + + L T C+ C D
Sbjct: 1404 ELTKICSLQLCDDCLEKRSTTTLSFLIKKLKRQKEYETLKTVCRTCSYRYTSDAGIENDH 1463
Query: 983 ---LCTSRDCPIFYRRKKAQKDM--------AEAKLQLDRW 1012
C S DCP+FY R KA++ + EA + L+ W
Sbjct: 1464 IASKCNSYDCPVFYSRVKAERYLRDNQSVQREEALISLNDW 1504
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 105 SNRELLPLSSGSAA-IIRIFGVTREGHSVCCKVHGFEPYFYISCP-QGMGPDDISH---- 158
S+ E LPL+ S IR+FG GH V C VHG PY +I Q + H
Sbjct: 43 SHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPYMFIKYDGQITDTSTLRHQRCA 102
Query: 159 -FHQILEGRMREANRNSKVPQ------------FVRHIEMVQKRSIMYYQQQKS-QPFLK 204
H+ LE ++R + + K + FV + +V + I +Y F K
Sbjct: 103 QVHKTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVV--KGIPFYGYHVGWNLFYK 160
Query: 205 IVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVG 264
I + P SC + I+ + K F YES++ + L++ D N+ G +WI +
Sbjct: 161 ISLLNP----SCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINLDRC 216
Query: 265 KYR 267
+R
Sbjct: 217 YFR 219
>gi|320581055|gb|EFW95277.1| Catalytic subunit of DNA polymerase zeta [Ogataea parapolymorpha
DL-1]
Length = 1564
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 204/688 (29%), Positives = 318/688 (46%), Gaps = 65/688 (9%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLA 424
T R +L WR +E+ + N+ L I + H ++ + + L
Sbjct: 885 TGRHMLNLWRPLRKELSINRYSLENVVWHTLHIKIPHYE-HKTLTQWFLSNSPGNLNNLV 943
Query: 425 VYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV 484
Y + + +L++K+ I VE +R G+ + RG KV S L+R AK +N +
Sbjct: 944 EYYMSRLHWQMKLINKMEIIERTVEESRFLGIDYYSVFYRGSQFKVESLLVRLAKAENFI 1003
Query: 485 I--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV--- 539
+ P+ KQ + +LE + FY+ P+ LDF SLYPS+++A+NLCYSTL+
Sbjct: 1004 LISPSKKQVFKQDPLQVIPLILEPESSFYKSPLLVLDFQSLYPSLVIAHNLCYSTLLGRL 1063
Query: 540 ---TPEDARKLN-----LPP-------ECVNKTPSGETFVKSNLQKGILPEILEELLAAR 584
P+ + L LPP + + TP+G F+K N++K +L ++L E+L AR
Sbjct: 1064 HGYDPKKTQTLGITSWKLPPGLLKLFEKHITVTPNGLMFLKPNVRKSVLAKMLSEILDAR 1123
Query: 585 KRAKADLKEAKDPLEKAVL-DGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGR 642
K + KD E L + RQLALK+ AN YG+ AT G++P I+ ++ S R
Sbjct: 1124 ILVKDTMNGLKDDSELYKLYNNRQLALKLIANVTYGYASATYSGRMPNSAIADAIVSAAR 1183
Query: 643 QMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT 702
+ + +E + A+V+YGDTDS+ V + A KLGRE +++I+
Sbjct: 1184 ETLHSAISEIEK------NEKWGAKVVYGDTDSLFVYLPGKSKADAFKLGREISNHITSI 1237
Query: 703 FIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVT 761
P++L+FEKVY+P +LISKKRYAG Y ++ K D KGIETVRRD + +V
Sbjct: 1238 NPSPVRLKFEKVYFPCVLISKKRYAGYSYEHEDQETPKFDAKGIETVRRDGVPAQQKMVE 1297
Query: 762 ECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAE 821
+ L + +D+ QYV ++ N+++L + K + + G +
Sbjct: 1298 KSLRLLFETKDLTKVKQYVNLQFLKIMQNKVNLQDFLFGKEI-RLGSYKNPTSIPPGARI 1356
Query: 822 RMRK--RDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
M+K D + P +RV Y++ K K +R P L N N+ +D YY+ +
Sbjct: 1357 TMKKVAEDHRSEPQYRERVFYMVAKGYKDQLLRDRCMAPRDFLANGNLELDAFYYITKVL 1416
Query: 879 SKPLLRIFEPILKNASKEL------LSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL 932
PL RIF + +K L + ++ TP ++ AK CI C +
Sbjct: 1417 IPPLQRIFNLCGVDVNKWFDELPRNLIAPNLDQLNFKTP----LINSAK----CINCNTV 1468
Query: 933 IS-----NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQEC--------QGSLH 979
I G LC C E + S V+ E C+ C L
Sbjct: 1469 IQRTLGRTGKLCHECSANELQTIAHMRSCVRAKESQMDATMLICKRCTKRSLRNNNSPLS 1528
Query: 980 QDVLCTSRDCPIFYRRKKA----QKDMA 1003
+ CT+ DC +FY R KA +K MA
Sbjct: 1529 TALACTNEDCSVFYDRIKAITQTEKTMA 1556
>gi|134108036|ref|XP_777400.1| hypothetical protein CNBB2010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260090|gb|EAL22753.1| hypothetical protein CNBB2010 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1973
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 182/628 (28%), Positives = 306/628 (48%), Gaps = 55/628 (8%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R+ Y + + +LD+ I E ARV GV + +L+RG KV S + R AK +
Sbjct: 1332 RVLKYFFQRTVMCMEILDQAEIITKTAEFARVFGVDFASVLTRGSQYKVESFIFRIAKPE 1391
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
+ V+ P+ +Q G + + + E + +Y P+ LDF SLYPSIM+AYN+CYST +
Sbjct: 1392 SFVLVSPSKQQVGLQNAPFAVPLIAEPESKYYTHPVIVLDFQSLYPSIMIAYNICYSTCL 1451
Query: 540 TPEDARK----------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
+ K L L + + TP+G FVK ++K +L ++L E+L
Sbjct: 1452 GRVEMFKGTNKFGFTNLKVTEGLLELLKDYLTVTPNGMIFVKPAIRKSLLAKMLGEILDT 1511
Query: 584 RKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K +K A+ D A+ + RQL LK+ AN YG+T AT G++PCIEI+ S+ G
Sbjct: 1512 RVMIKHAMKGARGDKSLTAMHNARQLGLKLMANVTYGYTSATYSGRMPCIEIADSIVQTG 1571
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E ++L+ + + +A V+YGDTDS+ V + E A K+G + A+ ++
Sbjct: 1572 RETLEKAQELIHSRV------DWDARVVYGDTDSLFVALPGRSKEQAFKIGYDIANAVTA 1625
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLV 760
KP+KL+FEKVY +L++KKRY G + +P+ + D KGIET+RRD + +
Sbjct: 1626 LNPKPVKLKFEKVYMGSVLMAKKRYVGFKYEHPDDTEPSFDAKGIETIRRDGFPAQQKME 1685
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
CL + +D+ ++ + +L + + +I K + T + + +
Sbjct: 1686 EVCLKLLFRTQDLSKVKEFCLKEWTKILQGHVSMQDFIIAKEVRLGTYSEKGIPPPGAAV 1745
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
A R +D P +RVPY +I A G + +R+ P +L + ++ ID YY+ N +
Sbjct: 1746 AYRRILKDPRDEPQYAERVPY-LISNADGRRLIDRARMPEELLSSRSLSIDAEYYIRNLL 1804
Query: 879 SKPLLRIF-------EPILKNASKELLSGDHTRSISISTPSNSGIMKFAK---------- 921
PL RIF E N K G + ++ T +G K +
Sbjct: 1805 IPPLSRIFNLVGADVEEWYDNMPKTKRLGKYDKAGGKMTNRGNGKGKQGEAKGRGSRIDS 1864
Query: 922 --RQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQV---QELEVLFGRLWTQCQECQG 976
R C+ C + S+ LC C+ + +S++ Q+ ++ ++ C
Sbjct: 1865 HFRSSHCVVC-GIESSDVLCHPCRLDPSTTSHALLSRLHIAQDKLIVLQKICASCSSVPP 1923
Query: 977 SLHQDVLCTSRDCPIFYRRKKAQKDMAE 1004
+ + +LC S DCP + R A++++ +
Sbjct: 1924 A--EKILCDSIDCPNTFARVAAEREVED 1949
>gi|259149989|emb|CAY86792.1| Rev3p [Saccharomyces cerevisiae EC1118]
Length = 1504
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 190/681 (27%), Positives = 317/681 (46%), Gaps = 60/681 (8%)
Query: 365 TERDVLLAWRDFIREVDPDVMI----GYNICKFDLPYLIEKEDVHHSIISDLQNGNAETR 420
T R ++ WR +V+ +NI LP+ ++++ N T
Sbjct: 819 TGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHF------SFESLTNMWNAKKSTT 872
Query: 421 RRLAV--YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKA 478
V Y L A + +LL K +I +E AR+ G+ + RG KV S L+R
Sbjct: 873 ELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRIC 932
Query: 479 KQKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYS 536
K ++ ++ P K ++ V+E + FY+ P+ LDF SLYPSIM+ YN CYS
Sbjct: 933 KSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCYS 992
Query: 537 TLV-------TPED---ARKLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEE 579
T++ + E+ K +LP V P+G + K++++K L ++L +
Sbjct: 993 TMIGRVREINSTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKMLTD 1052
Query: 580 LLAARKRAKADLKEAKD--PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSS 636
+L R K + E D K +L+ +QLALK+ AN YG+T A+ G++PC +++ S
Sbjct: 1053 ILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSASFSGRMPCSDLADS 1112
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+ GR+ +E ++E T NA+V+YGDTDS+ V T A +G A
Sbjct: 1113 IVQTGRETLEKAIDIIEKDET------WNAKVVYGDTDSLFVYLPGKTAIEAFSIGHAMA 1166
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLL 755
+ ++ KPI L+FEKVY+P +LISKKRY G + +P + D KGIETVRRD
Sbjct: 1167 ERVTQNNPKPIFLKFEKVYHPSILISKKRYVGFSYESPSQTLPIFDAKGIETVRRDGIPA 1226
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA- 814
+ ++ +C+ + +D+ +Y+++ + + ++ K + E A
Sbjct: 1227 QQKIIEKCIRLLFQTKDLSKIKKYLQNEFFKIQIGKVSAQDFCFAKEVKLGAYKSEKTAP 1286
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYY 873
A + +R D P +R+PY+++K +G ER P LE N+ +D+ YY
Sbjct: 1287 AGAVVVKRRINEDHRAEPQYKERIPYLVVKGKQGQLLRERCVSPEEFLEGENLELDSEYY 1346
Query: 874 LENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK 930
+ + PL R+F I + N ++E++ ++ S +T I + C +
Sbjct: 1347 INKILIPPLDRLFNLIGINVGNWAQEIVK---SKRASTTTTKVENITRVGTSATCCNCGE 1403
Query: 931 AL--ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV------ 982
L I + LC C + + + + + + + L T C+ C D
Sbjct: 1404 ELTKICSLQLCDDCLEKRSTTTLSFLIKKLKRQKEYETLKTVCRTCSYRYTSDAGIENDH 1463
Query: 983 ---LCTSRDCPIFYRRKKAQK 1000
C S DCP+FY R KA++
Sbjct: 1464 IASKCNSYDCPVFYSRVKAER 1484
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 105 SNRELLPLSSGSAA-IIRIFGVTREGHSVCCKVHGFEPYFYISCP-QGMGPDDISH---- 158
S+ E LPL+ S IR+FG GH V C VHG PY +I Q + H
Sbjct: 43 SHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPYMFIKYDGQITDTSTLRHQRCA 102
Query: 159 -FHQILEGRMREANRNSKVPQ------------FVRHIEMVQKRSIMYYQQQKS-QPFLK 204
H+ LE ++R + + K + FV + +V + I +Y F K
Sbjct: 103 QVHKTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVV--KGIPFYGYHVGWNLFYK 160
Query: 205 IVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVG 264
I + P SC + I+ + K F YES++ + L++ D N+ G +WI V
Sbjct: 161 ISLLNP----SCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINVDRC 216
Query: 265 KYR 267
+R
Sbjct: 217 YFR 219
>gi|156846635|ref|XP_001646204.1| hypothetical protein Kpol_1013p17 [Vanderwaltozyma polyspora DSM
70294]
gi|156116878|gb|EDO18346.1| hypothetical protein Kpol_1013p17 [Vanderwaltozyma polyspora DSM
70294]
Length = 1503
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 200/683 (29%), Positives = 326/683 (47%), Gaps = 67/683 (9%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSI--ISDLQNGNAETR-R 421
T R ++ WR + + N+C L+ K H S +S + NGN T +
Sbjct: 819 TGRHIINIWRAMRASTNFNQYTIENLCS----KLLNKRLPHFSFSDLSKMWNGNDVTEIK 874
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLR--KAK 479
+ Y + LL K +I E +R+ G+ + RG V S L+R K++
Sbjct: 875 TVMSYWMTRVRCNMLLLKKQEYITRVTEQSRLIGIDFYSVYYRGSQYNVESFLIRLCKSE 934
Query: 480 QKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
+ LV P+ ++ ++ ++E + FY+ P+ LDF SLYPSIM+AYN CYST++
Sbjct: 935 EFLLVSPSKEKVRDQRSLECVPLIMEPESAFYKSPLLVLDFQSLYPSIMIAYNYCYSTML 994
Query: 540 -TPED---------ARKLNLP-------PECVNKTPSGETFVKSNLQKGILPEILEELLA 582
ED A L++P + + +P+G F+KS ++K IL ++L ++L
Sbjct: 995 GRVEDLKPNGNQIGATTLSIPNNLLKLLKDDIQISPNGVVFLKSTVRKSILSKMLTDILK 1054
Query: 583 AR---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVT 638
R K ++L+ L K +++ RQLALK+ AN YG++ A+ G++PC +++ S+
Sbjct: 1055 TRVMVKNTMSELQNVSSDLNK-IMNNRQLALKLLANVTYGYSSASFSGRMPCSDLADSIV 1113
Query: 639 SYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADY 698
GR +++ L+E A+V+YGDTDS+ V + E + K+GR +
Sbjct: 1114 QTGRDTLQNAINLIE------SNDNWGAKVVYGDTDSLFVYLPGKSREESFKIGRSIVEE 1167
Query: 699 ISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVK 757
++ PI L+FEKVY+P LL+SKKRY G + +K D KGIETVRRD +
Sbjct: 1168 VTKQNPDPIILKFEKVYHPCLLLSKKRYVGYSFEKESQKEPIFDAKGIETVRRDGHAAQQ 1227
Query: 758 NLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA--A 815
+V + + + +++ +Y+ + + + + K K G K+ A
Sbjct: 1228 YIVEKSIRLLFETKNLSKISEYLLEQFARIETGSISIQDFCFAKE-AKLGTYKSEKSTPA 1286
Query: 816 HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYL 874
+A R + D P +RVPY+I+K +G ER P L+N N+ +D YY+
Sbjct: 1287 GAIVAMRAMENDHRAKPQYKERVPYLIVKGKQGQILRERGVSPEEFLKNPNLELDAEYYI 1346
Query: 875 ENQISKPLLRIFEPI------LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIG 928
+ PL RIF + +ASK+ L D++R + +T SN M +CI
Sbjct: 1347 MKTLIPPLDRIFNILGVSVKDWISASKKNLKLDYSRR-NTNTLSNVKCM-------TCIN 1398
Query: 929 CK-ALISNGT-LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQD----- 981
CK + N T LC HC + + + + + + + T C+ C D
Sbjct: 1399 CKEKMAENKTHLCVHCNNEKPTVSVQLLQRQLRKQERLKKTLTACRICSYKYTHDAGIMG 1458
Query: 982 ----VLCTSRDCPIFYRRKKAQK 1000
V C S DCP++Y R K Q+
Sbjct: 1459 SAISVKCNSYDCPVYYSRIKLQE 1481
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 95 QLDIDYVIGDSNRELLPLSS-GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGP 153
QLD Y G S LPL S +IR++G GH+V C VHG PY YI +
Sbjct: 36 QLDSQY--GSS----LPLHRFESVPVIRVYGSLPTGHTVLCHVHGVFPYIYIRYDGNVYD 89
Query: 154 DDI------SHFHQILEGRMREANRNSKVP----------------QFVRHIEMVQKRSI 191
+ + H++ E +++ ++ +SK +++ ++ +V ++I
Sbjct: 90 SSLELNQRCARLHKLFEDKLKTSDTSSKRNKAKGSKTNRYGDGNRLKYIANVSIV--KAI 147
Query: 192 MYYQQQKSQP-FLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMID 250
+Y F KI + P ++ G+ D T+ES++ + L+F D
Sbjct: 148 PFYGFNVGWSLFYKISLLNPKYSNKVSDLIRDGVMFDN----EVETFESHIPYLLQFSSD 203
Query: 251 CNIVGGNWIEVPVGKYRK 268
N+ G +WI++ +RK
Sbjct: 204 YNLFGCSWIKLDKCYFRK 221
>gi|365762744|gb|EHN04277.1| Rev3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1504
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 190/681 (27%), Positives = 317/681 (46%), Gaps = 60/681 (8%)
Query: 365 TERDVLLAWRDFIREVDPDVMI----GYNICKFDLPYLIEKEDVHHSIISDLQNGNAETR 420
T R ++ WR +V+ +NI LP+ ++++ N T
Sbjct: 819 TGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHF------SFESLTNMWNAKKSTT 872
Query: 421 RRLAV--YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKA 478
V Y L A + +LL K +I +E AR+ G+ + RG KV S L+R
Sbjct: 873 ELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRIC 932
Query: 479 KQKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYS 536
K ++ ++ P K ++ V+E + FY+ P+ LDF SLYPSIM+ YN CYS
Sbjct: 933 KSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCYS 992
Query: 537 TLV-------TPED---ARKLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEE 579
T++ + E+ K +LP V P+G + K++++K L ++L +
Sbjct: 993 TMIGRVREINSTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKMLTD 1052
Query: 580 LLAARKRAKADLKEAKD--PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSS 636
+L R K + E D K +L+ +QLALK+ AN YG+T A+ G++PC +++ S
Sbjct: 1053 ILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSASFSGRMPCSDLADS 1112
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+ GR+ +E ++E T NA+V+YGDTDS+ V T A +G A
Sbjct: 1113 IVQTGRETLEKAIDIIEKDET------WNAKVVYGDTDSLFVYLPGKTAIEAFSIGHAMA 1166
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLL 755
+ ++ KPI L+FEKVY+P +LISKKRY G + +P + D KGIETVRRD
Sbjct: 1167 ERVTQNNPKPIFLKFEKVYHPSILISKKRYVGFSYESPSQTLPIFDAKGIETVRRDGIPA 1226
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA- 814
+ ++ +C+ + +D+ +Y+++ + + ++ K + E A
Sbjct: 1227 QQKIIEKCIRLLFQTKDLSKIKKYLQNEFFKIQIGKVSAQDFCFAKEVKLGAYKSEKTAP 1286
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYY 873
A + +R D P +R+PY+++K +G ER P LE N+ +D+ YY
Sbjct: 1287 AGAVVVKRRINEDHRAEPQYKERIPYLVVKGKQGQLLRERCVSPEEFLEGENLELDSEYY 1346
Query: 874 LENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK 930
+ + PL R+F I + N ++E++ ++ S +T I + C +
Sbjct: 1347 INKILIPPLDRLFNLIGINVGNWAQEIVK---SKRASTTTTKVENITRVGTSATCCNCGE 1403
Query: 931 AL--ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV------ 982
L I + LC C + + + + + + + L T C+ C D
Sbjct: 1404 ELTKICSLQLCDDCLEKRSTTTLSFLIKKLKRQKEYETLKTVCRTCSYRYTSDAGIENDH 1463
Query: 983 ---LCTSRDCPIFYRRKKAQK 1000
C S DCP+FY R KA++
Sbjct: 1464 IASKCNSYDCPVFYSRVKAER 1484
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 105 SNRELLPLSSGSAA-IIRIFGVTREGHSVCCKVHGFEPYFYISCP-QGMGPDDISH---- 158
S+ E LPL+ S IR+FG GH V C VHG PY +I Q + H
Sbjct: 43 SHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPYMFIKYDGQITDTSTLRHQRCA 102
Query: 159 -FHQILEGRMREANRNSKVPQ------------FVRHIEMVQKRSIMYYQQQKS-QPFLK 204
H+ LE ++R + + K + FV + +V + I +Y F K
Sbjct: 103 QVHKTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVV--KGIPFYGYHVGWNLFYK 160
Query: 205 IVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVG 264
I + P SC + I+ + K F YES++ + L++ D N+ G +WI V
Sbjct: 161 ISLLNP----SCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINVDRC 216
Query: 265 KYR 267
+R
Sbjct: 217 YFR 219
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 23/186 (12%)
Query: 260 EVPVGKYRKTAKTLSYCQLEFDCLY---SDIISRHPEGEFSKMAPFRILSFDIECAGRKG 316
+VP +KT +S LY SD+ + E + S L+ +I R
Sbjct: 622 KVPSMGNKKTESQISMHTPHSKFLYKFASDVSGKQKEKKVSVHDSLTHLTLEIHANTRSD 681
Query: 317 HFPEPTHDPVIQVANLVTLQGEKQPF-----IRNVMTLKSCAP-----------IVGVDV 360
P+P D V + + L+ E P +M + + I + V
Sbjct: 682 KIPDPAIDEVSMI--IWCLEEETFPLDLDIAYEGIMIVHKASEDSTFPTKIQHCINEIPV 739
Query: 361 MSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK-EDVHH-SIISDLQNGNAE 418
M +E+E ++ A D + +DPD++ G+ I F Y+IE+ + +H I+ +L +
Sbjct: 740 MFYESEFEMFEALTDLVLLLDPDILSGFEIHNFSWGYIIERCQKIHQFDIVRELARVKCQ 799
Query: 419 TRRRLA 424
+ +L+
Sbjct: 800 IKTKLS 805
>gi|44491795|gb|AAS47476.1| DNA polymerase [Murid herpesvirus 4]
Length = 1094
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 176/565 (31%), Positives = 278/565 (49%), Gaps = 87/565 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT---------------------- 497
++ GQ I++ + LL + ++L++P + G E
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDLILPTMPSLGDEAAAAIAAAGEGDETSEGENSNNSRT 597
Query: 498 --YEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DARKLN 548
Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D ++
Sbjct: 598 VGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVLRVE 657
Query: 549 LPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQL 608
+ +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D +QL
Sbjct: 658 IGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDKQQL 710
Query: 609 ALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTVGGY 662
ALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV G
Sbjct: 711 ALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTVLGL 770
Query: 663 EHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLEFEK 713
A ++IYGDTDSV F EA +K +G AA+ + F +P++LEFEK
Sbjct: 771 PPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLEFEK 830
Query: 714 VYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D +
Sbjct: 831 MFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFNDETV 886
Query: 774 P-GAVQYVKSTISDLLMN----------------RMDLSL-------LVITKGLTKTGDD 809
G ++ + T DL N R DL L L ++ L++
Sbjct: 887 SEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARHDLHLKKVPVPELTLSSVLSQELSC 946
Query: 810 YEVKA-AHVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVLENN 865
Y+ K H+ + R+ R P VGDRV YV+ K YE +EDP +V+E
Sbjct: 947 YKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVVEAK 1005
Query: 866 IPIDTHYYLENQISKPLLRIFEPIL 890
+ I+ Y E Q+ K + P+
Sbjct: 1006 LSINAEKYYE-QVVKAVTNTLMPVF 1029
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 147/359 (40%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RARGWCRGPFP-------DELHFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG S+C V G + YFY C + D + + I + VP+ F
Sbjct: 130 ATEEGVSICVNVFGQKAYFY--CERTQSEDLKNIVYDIAD----------TVPEPRSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMVE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W V + A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDKKIPSFGWC-VARRYSVRAAGHVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVSHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDTKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|328862001|gb|EGG11103.1| hypothetical protein MELLADRAFT_33498 [Melampsora larici-populina
98AG31]
Length = 1618
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 185/626 (29%), Positives = 302/626 (48%), Gaps = 52/626 (8%)
Query: 413 QNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLS 472
++G+ E +RR+ +Y + L L+D+ I E++RV GV +SRG KV S
Sbjct: 926 RSGSIERQRRVLLYYMDRVELDIHLMDETEIISRNAEISRVLGVDFFSAISRGSQFKVES 985
Query: 473 QLLRKAKQKNLVIPNV--KQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMA 530
L R AK +N ++P+ ++ G + ++E ++ FY+ P+ LDF SLYPSIM+A
Sbjct: 986 VLFRIAKPENYLLPSPSREEVGQQNAAECIPLIMEPQSAFYKSPLIVLDFQSLYPSIMIA 1045
Query: 531 YNLCYSTLVTPEDARK---------LNLPPECVN-------KTPSGETFVKSNLQKGILP 574
YN CYST + K L+LP ++ +P+G FVK ++K +L
Sbjct: 1046 YNYCYSTCLGRVGTFKGTSKFGTSALDLPDGLLSLLKDHLIVSPNGLMFVKPQVRKSLLS 1105
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAV---LDGRQLALKISANSVYGFTGATV-GQLPC 630
++L E L R K +K KD +K + ++ RQL LK AN YG+T A+ G++PC
Sbjct: 1106 KMLSEFLDTRVMIKESMKAVKD--DKGMCKMMNARQLGLKFIANVTYGYTSASFSGRMPC 1163
Query: 631 IEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMK 690
+EI+ ++ GR+ +E + + + E +A+V+YGDTDS+ V T E A +
Sbjct: 1164 VEIADAIVQTGRETLEKSMEFIHSV------KEWDAKVVYGDTDSLFVYLPGRTKEDAFR 1217
Query: 691 LGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVR 749
+G+E A+ ++ P+KL+FEKVY P +L++KKRY G Y + + + KGIE +R
Sbjct: 1218 IGKEMAEAVTKRNPAPVKLKFEKVYLPCVLMAKKRYVGAKYESLADAEPHFEAKGIEVIR 1277
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGD 808
RD ++ + CL K+ +D+ Y+ LL+ ++ + K + T
Sbjct: 1278 RDGIPALQKIQETCLKKLFRTQDLSDIKAYLYRQWQRLLLGKVSIQDFTFAKEVKLGTYS 1337
Query: 809 DYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNI-P 867
+ +A R D T P +RVPYVI+K A ++ +R+ P VL+N I
Sbjct: 1338 ENVPPPPGALIAARKMASDPRTEPAYAERVPYVIVKGAPQSRLRDRAVPPEVVLQNPILA 1397
Query: 868 IDTHYYLENQISKPLLRIFE-------------PILKNASKELLSGDHTRSISISTPSN- 913
+D+ YY+ L RIF P K + +G + S +N
Sbjct: 1398 LDSEYYITRVFIPSLARIFNLIGVDIASWYASMPKFVRIFKPIKAGPTGDAKEASDVANE 1457
Query: 914 SGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQE 973
+ M + K + I + ++ C G L + ++ ++L + G C+
Sbjct: 1458 TAQMIWLKSNIFQIASRGILLCQACCEQPDGVAYTLMARARAREKKLRDIEG----ACRI 1513
Query: 974 CQGS-LHQDVLCTSRDCPIFYRRKKA 998
C + + V C S DC Y R KA
Sbjct: 1514 CSNTPALESVECDSLDCGRMYERVKA 1539
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 80/231 (34%), Gaps = 59/231 (25%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQIL--------EGRMREA 170
+IRIFG T G V VHG YFY+ + PD + F + L + +
Sbjct: 53 VIRIFGATPAGQRVLAHVHGAMSYFYVQYDGPIDPDTVHRFIRRLGHALNYATAASLGQV 112
Query: 171 NRNSKVP----QFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQL 226
N N Q+V +I + K Y + FLKI +L G +
Sbjct: 113 NSNKSADRSRHQYVAYIALC-KGVPFYGFHVGYRYFLKIYCLQARFKKRMADLLRSGKVI 171
Query: 227 D---------------GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR---- 267
D F +E ++ F L+FM+D N+ G IE+ +R
Sbjct: 172 DPSSHSPYQTSNNQRGSSARAGFKVFEEHIPFHLQFMLDHNLYGCGMIELSECSFRLPLP 231
Query: 268 ---------------------------KTAKTLSYCQLEFDCLYSDIISRH 291
++ S+C LE DC S I++RH
Sbjct: 232 DDLPQSPNSNVAGLFSAGNVPTDLLGPRSLTKTSHCTLEIDCHVSAIMNRH 282
>gi|367000956|ref|XP_003685213.1| hypothetical protein TPHA_0D01380 [Tetrapisispora phaffii CBS 4417]
gi|357523511|emb|CCE62779.1| hypothetical protein TPHA_0D01380 [Tetrapisispora phaffii CBS 4417]
Length = 1503
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 197/705 (27%), Positives = 333/705 (47%), Gaps = 83/705 (11%)
Query: 367 RDVLLAWRDFIREVDPDV----MIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRR 422
R VL WR EV+ ++ Y + LP + +++L N T+ R
Sbjct: 823 RHVLNIWRAMRSEVNLKQYTVEILAYEVLHKRLPRFSSQ------YLTELWNSRDITKIR 876
Query: 423 LAV-YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
V Y + + LL K +I +E AR+ G+ + RG V S L+R K +
Sbjct: 877 TVVFYWINRVRVNVSLLKKQDYIERIIEQARLIGIDFYSVYYRGSQFNVESVLVRLCKSE 936
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
+ ++ P+ +++ V+E + FY+ P+ LDF SLYPS+MMAYN CYST++
Sbjct: 937 SFLLLSPSKDDVRNQKPLECVPLVMEPDSLFYKSPLVVLDFQSLYPSVMMAYNYCYSTML 996
Query: 540 -----------------TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLA 582
D L L + + +P+G FVK +++K L ++L E+L
Sbjct: 997 GRVNEMSYVGNKIGVTSINYDENILTLLKDDIIISPNGIAFVKPSVRKSTLTKMLNEILT 1056
Query: 583 ARKRAKADLKE--AKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTS 639
R K +K+ A++ +++ RQLALK+ AN YG+ A+ G++P ++S ++
Sbjct: 1057 TRFLVKKTMKDLPAENSKLNRLMNSRQLALKLLANVTYGYASASFSGRMPNSDLSDAIVQ 1116
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
GR+++++ + +E G ++ A+V+Y DTDS+ V T E A +GRE A I
Sbjct: 1117 TGREILQNAIEFIE------GSEKYGAKVVYADTDSLFVYLPGKTREDAFSIGRELATEI 1170
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKN 758
S PI L FEKVY P +L+SKKRY G + + + + KGIETVRRD L +
Sbjct: 1171 SRRNPDPIVLNFEKVYNPCILLSKKRYVGYAYEYESQIKPIFNAKGIETVRRDGYRLQQQ 1230
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD--DYEVKAAH 816
+V + L +D+ +Y+ + L + + L + + K G + A
Sbjct: 1231 VVEKALTIFFSTQDLSLVKKYLFEIFTKLDRGEIPIQDLCFAQEV-KLGSYKSIDTAPAG 1289
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLE 875
++A R K D P +RVPY+++K G +RS P L+N ++ ID+ YY+
Sbjct: 1290 AQVAMREMKNDKRAEPQYKERVPYLVVKGEAGQILRDRSISPKEFLQNPSLEIDSEYYIT 1349
Query: 876 NQISKPLLRIFEPILKNAS---------KELLSGDHTRSISISTPSNSGIMKFAKRQLSC 926
+ PL R F + + K++L+G+ + + I+ F++ C
Sbjct: 1350 KTLVPPLNRFFRLTGVDVNEWLNEMPRFKKILTGEENQQL-------KKILNFSE----C 1398
Query: 927 IGCKALISNG--TLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQ-------GS 977
I C + G TLCS C +++ + +++ E + + T C+ C G
Sbjct: 1399 INCHQSFTTGISTLCSDCSNQKSATAVNLIESIRKSETAYENIQTVCRVCSFKYSHDAGP 1458
Query: 978 LHQDVL--CTSRDCPIFYRRKKAQKDM-----AEAKLQL---DRW 1012
++ D+ C S DCP+++ + K +K + +E + QL D W
Sbjct: 1459 INSDISSNCISLDCPVYFSKLKTKKQLKSKQYSEIQRQLNTFDSW 1503
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 84/218 (38%), Gaps = 36/218 (16%)
Query: 80 LSSGYVSQCQSIMFQQLDIDY------VIGDSNRELLPLSS-GSAAIIRIFGVTREGHSV 132
L Y I Q D D+ ++ ++ LPL + +IRIFG GH V
Sbjct: 10 LEDSYTLNADHIYIQLNDYDFYSTKPSILDSTHGTSLPLHKFENVPVIRIFGSLPTGHQV 69
Query: 133 CCKVHGFEPYFYISCPQGMGPDDI--------SHFHQILEGRMR--------------EA 170
C VHG PY Y+ + DI S+ H LE R
Sbjct: 70 LCHVHGIYPYIYVGYDGSI--HDISTVMNQKCSNIHSKLENLSRVQLGNQKNDKASSHSK 127
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
N N+ ++V ++ +V+ Y S F KI P V ++ G L
Sbjct: 128 NDNNHRLKYVANVSIVKGIPFYGYHVGWSL-FYKISFLKPHFVNRISDLIRNG----DLF 182
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRK 268
YE+++ + L+F D N+ G +W+E+ +RK
Sbjct: 183 KNGAQIYEAHIPYYLQFCADFNLFGCSWLELDTCYFRK 220
>gi|190407794|gb|EDV11059.1| DNA polymerase zeta subunit [Saccharomyces cerevisiae RM11-1a]
Length = 1504
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 190/681 (27%), Positives = 317/681 (46%), Gaps = 60/681 (8%)
Query: 365 TERDVLLAWRDFIREVDPDVMI----GYNICKFDLPYLIEKEDVHHSIISDLQNGNAETR 420
T R ++ WR +V+ +NI LP+ ++++ N T
Sbjct: 819 TGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHF------SFESLTNMWNAKKSTT 872
Query: 421 RRLAV--YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKA 478
V Y L A + +LL K +I +E AR+ G+ + RG KV S L+R
Sbjct: 873 ELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRIC 932
Query: 479 KQKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYS 536
K ++ ++ P K ++ V+E + FY+ P+ LDF SLYPSIM+ YN CYS
Sbjct: 933 KSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCYS 992
Query: 537 TLV-------TPED---ARKLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEE 579
T++ + E+ K +LP V P+G + K++++K L ++L +
Sbjct: 993 TMIGRVREINSTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKMLTD 1052
Query: 580 LLAARKRAKADLKEAKD--PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSS 636
+L R K + E D K +L+ +QLALK+ AN YG+T A+ G++PC +++ S
Sbjct: 1053 ILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSASFSGRMPCSDLADS 1112
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+ GR+ +E ++E T NA+V+YGDTDS+ V T A +G A
Sbjct: 1113 IVQTGRETLEKAIDIIEKDET------WNAKVVYGDTDSLFVYLPGKTAIEAFSIGHAMA 1166
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLL 755
+ ++ KPI L+FEKVY+P +LISKKRY G + +P + D KGIETVRRD
Sbjct: 1167 ERVTQNNPKPIFLKFEKVYHPSILISKKRYVGFSYESPSQTLPIFDAKGIETVRRDGIPA 1226
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA- 814
+ ++ +C+ + +D+ +Y+++ + + ++ K + E A
Sbjct: 1227 QQKIIEKCIRLLFQTKDLSKIKKYLQNEFFKIQIGKVSAQDFCFAKEVKLGAYKSEKTAP 1286
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYY 873
A + +R D P +R+PY+++K +G ER P LE N+ +D+ YY
Sbjct: 1287 AGAVVVKRRINEDHRAEPQYKERIPYLVVKGKQGQLLRERCVSPEEFLEGENLELDSEYY 1346
Query: 874 LENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK 930
+ + PL R+F I + N ++E++ ++ S +T I + C +
Sbjct: 1347 INKILIPPLDRLFNLIGINVGNWAQEIVK---SKRASTTTTKVENITRVGTSATCCNCGE 1403
Query: 931 AL--ISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV------ 982
L I + LC C + + + + + + + L T C+ C D
Sbjct: 1404 ELTKICSLQLCDDCLEKRSTTTLSFLIKKLKRQKEYETLKTVCRTCSYRYTSDAGIENDH 1463
Query: 983 ---LCTSRDCPIFYRRKKAQK 1000
C S DCP+FY R KA++
Sbjct: 1464 IASKCNSYDCPVFYSRVKAER 1484
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 105 SNRELLPLSSGSAA-IIRIFGVTREGHSVCCKVHGFEPYFYISCP-QGMGPDDISH---- 158
S+ E LPL+ S IR+FG GH V C VHG PY +I Q + H
Sbjct: 43 SHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPYMFIKYDGQITDTSTLRHQRCA 102
Query: 159 -FHQILEGRMREANRNSKVPQ------------FVRHIEMVQKRSIMYYQQQKS-QPFLK 204
H+ LE ++R + + K + FV + +V + I +Y F K
Sbjct: 103 QVHKTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVV--KGIPFYGYHVGWNLFYK 160
Query: 205 IVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVG 264
I + P SC + I+ + K F YES++ + L++ D N+ G +WI +
Sbjct: 161 ISLLNP----SCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINLDRC 216
Query: 265 KYR 267
+R
Sbjct: 217 YFR 219
>gi|402868560|ref|XP_003898364.1| PREDICTED: DNA polymerase zeta catalytic subunit [Papio anubis]
Length = 3066
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 189/598 (31%), Positives = 284/598 (47%), Gaps = 96/598 (16%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2527 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2586
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2587 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2646
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2647 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2706
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2707 QDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2766
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2767 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2820
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIET V RD
Sbjct: 2821 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIET---------------------VRRD 2859
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAP 832
AV V+ +M D + P
Sbjct: 2860 SCPAVSKVR----------------------------------------KMLTYDRRSEP 2879
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI-- 889
VG+RVPYVII G + P+ VL++ + ++ YY+ QI PL RIF I
Sbjct: 2880 QVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLARIFSLIGI 2939
Query: 890 -LKNASKELLSGDHTRSISISTPSN-SGIMKFAKRQLSCIGCKALISNGTLCSHCKGREA 947
+ + EL + S S P G + L C C L +G +CS C+ +
Sbjct: 2940 DVFSWYHELPRIHKATNSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG-ICSKCRSQPQ 2998
Query: 948 ELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA 1005
+ +++ELE +L C+ C G + + C S +CP+ ++ + +++++A
Sbjct: 2999 HVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIPCVSLNCPVLFKVSRVNRELSKA 3056
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNS 174
++RIFG T G C +HG PY Y+ G G S+ Q+ R N S
Sbjct: 37 VVRIFGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPS 95
Query: 175 KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
Q V + +V Y +K + F+KI + P +V +L G ++ K +
Sbjct: 96 STAQHVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAVVKRICELLQSGAIMN----KFY 150
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+E+++ + L+ ID N+ G N I + K+RK +
Sbjct: 151 QPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
>gi|342360518|gb|AEL29753.1| hypothetical protein [Bovine herpesvirus 4]
Length = 1005
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 262/518 (50%), Gaps = 47/518 (9%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R R+ YC+ D+ L LL M E+A++ +P
Sbjct: 463 QKEDVTYKEIPSLFRSGEAGRARIGSYCVLDSVLVLDLLKYFMIHVEISEIAKMAKIPAR 522
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL AK+++ ++P + G Y+GATV+ GFY PI +D
Sbjct: 523 RVLTDGQQIRVFSCLLEAAKKEHFILP--IPGAQKPGGYQGATVINPIPGFYNTPILVVD 580
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP---ECVNKTPSGETFVKSNLQKGILPEI 576
FASLYPSI+ A+NLCYST++ ++ +L P E + + FVK + K +L +
Sbjct: 581 FASLYPSIIQAHNLCYSTMIQDQNLHLHHLKPDDYETFHLSTGPIHFVKQHKTKSLLSTL 640
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
L LA RK + +L D K +LD +QLA+K++ NSVYGFTG G LPCI I+ +
Sbjct: 641 LTAWLAKRKTIRKELANCDDGPMKTILDKQQLAIKVTCNSVYGFTGVASGILPCIPIAET 700
Query: 637 VTSYGRQMIEHTKKLVE----DKFTTVGGY------EHNAEVIYGDTDSVMVQFGVPTVE 686
VT GR M+E +K VE ++ + + Y + + VIYGDTDS+ ++ ++
Sbjct: 701 VTLQGRTMLEKSKAFVEMITPERLSDIVSYPVPCDPDASFRVIYGDTDSLFIECRGYPMQ 760
Query: 687 AAMKLGREAADYISGTFIK-PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGI 745
+ + + + + K PIKLE EK + L+++KKRY G+ + DK+ KG+
Sbjct: 761 SVLNFADKLTETTTKALFKDPIKLEAEKTFQCLLMLTKKRYIGILSS-----DKLVMKGV 815
Query: 746 ETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQY------------------------VK 781
+ +R+ C V+ E L +L D ++ A QY +
Sbjct: 816 DLIRKTACSFVQTTSKEILDLVLRDPEVKQAAQYLCRQAPAKVYSDGLPVGFWKVIDVLN 875
Query: 782 STISDLLMNRMDLSLLVITKGLTKTGDDYEVKA-AHVELAERMRKRDAATAPNVGDRVPY 840
++ + L ++ + L + L++ +Y+ H+ + ++ R+ P + DR+PY
Sbjct: 876 NSYAALATGKVSVESLTFSTELSRPFGEYKTTTLPHLTVYRKIMSRNEE-LPQIHDRIPY 934
Query: 841 VIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
V IK + + +EDP YV +N IPI Y + I
Sbjct: 935 VFIKGDQRGCKSDLAEDPTYVSQNKIPISVEIYFDKLI 972
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 28/289 (9%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH-FHQILEGRMREANRNS 174
+ ++++ G T++G SVC V YFY+ P G+ ++S+ Q L G + +
Sbjct: 124 NGTVLKLLGKTQDGASVCVNVFQQMVYFYVLVPDGV---NLSYVIQQTLNGGVNKQTCKF 180
Query: 175 KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
+ Q +++ I+ P KI ++ PT + G L G + F
Sbjct: 181 SITQ--------ERKKILKEYDPSLYPVYKITLSAPTEINQLVG------NLTSCGCEVF 226
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEG 294
ESNV + RF+ID W + + ++ S LEFDC D+ E
Sbjct: 227 ---ESNVNASTRFIIDNKFSTFGWYSCS-NPHPRISQRDSRTDLEFDCGLGDLQFHEEEQ 282
Query: 295 EFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLVTLQGEKQPFIRNVMTLKSC 352
++ P+ I+SFDIEC G +G FP T D VIQ++ ++ + P +++L +C
Sbjct: 283 QW---PPYTIMSFDIECIGEQG-FPCATKDEDLVIQISCIIWTVCSESPPQNILLSLGTC 338
Query: 353 APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
PI DV F +E D+ A+ +R+ + D + GYNI FD PY+I++
Sbjct: 339 DPIANTDVYEFPSELDMFYAFFTLLRDFNIDFVTGYNIANFDFPYIIDR 387
>gi|298675626|ref|YP_003727376.1| DNA polymerase Pol2 [Methanohalobium evestigatum Z-7303]
gi|298288614|gb|ADI74580.1| DNA polymerase Pol2 [Methanohalobium evestigatum Z-7303]
Length = 913
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 274/523 (52%), Gaps = 48/523 (9%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
EK DV + + N E ++ Y +D+ L L+ KL + Y+ +++V+G +
Sbjct: 340 EKLDVEPHQMVEYWNDGGEKTKKFIDYARRDSELALELVTKLQLLDKYIALSQVSGSVLQ 399
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIP---NVKQAGSEQGT-YEGATVLEARAGFYEKPI 515
++ GQS V + L R+ ++ VIP + + +EQG +G VLE + G + +
Sbjct: 400 DVVDGGQSSMVENLLFREFGKQGRVIPPKPDNRPDDNEQGEEIKGGEVLEPKKGLLDN-V 458
Query: 516 ATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPE 575
LD+ SLYP+IMMA+NLCY+T+V + + P PSG FV ++ KGI+P
Sbjct: 459 VILDYKSLYPTIMMAHNLCYTTVVVNDHPNGETINP------PSGGEFVNPDVLKGIVPS 512
Query: 576 ILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISS 635
ILE LL R K +K D + D QLALKI NS YG++G +L + +++
Sbjct: 513 ILETLLNQRSEVKKKMKSISDGDTYRMYDATQLALKILLNSFYGYSGYARARLYSLTLAN 572
Query: 636 SVTSYGRQMIEHTKKLVEDKFTTVGGYEH------------------NAEVIYGDTDSVM 677
+VTSYGR+ I++T+ L+ + V ++ N V+YGDTDSV
Sbjct: 573 AVTSYGRENIQNTRDLINNNIRKVVLKDNQAYLPDEISPEDESEDVINLSVVYGDTDSVF 632
Query: 678 VQFGVP-----TVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWT 732
+ ++E A +G A+ +S + P++LEFE + L ++KKRYA W
Sbjct: 633 IHCSPEYNNDISLEDAECVGTRIAEKVSQSLPDPMELEFESIAKRGLFLAKKRYA--LWV 690
Query: 733 ----NPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTIS--- 785
N E D + KG+ETVRRD C L + L +L + D+ AV+YVKS ++
Sbjct: 691 FEQENDEWEDSIKVKGMETVRRDWCELTSKTLNRVLELVLKEGDVDKAVEYVKSVVNRVR 750
Query: 786 --DLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII 843
D+ ++ + L +T+ +K D Y+ K H+ + E+ +KR +P +G+RVP+VI+
Sbjct: 751 NIDVQKDKDVIDDLTMTRLYSKKKDSYKSKQPHLTVIEKTKKR-TGISPPIGERVPFVIV 809
Query: 844 KAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIF 886
A R+EDP YV ENN+ +D YY++ QI P+ RI
Sbjct: 810 --AGNDLFVNRAEDPEYVRENNLTLDVDYYIKKQILPPVERIL 850
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 168/352 (47%), Gaps = 67/352 (19%)
Query: 93 FQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMG 152
FQ LD DY I ++R+FG +G SVCC V GFEPYFY +
Sbjct: 3 FQILDADYSI-----------YNDEPVVRLFGRGEDGSSVCCFVPGFEPYFYANVA---- 47
Query: 153 PDDISHFHQILEGRMREANRNSKVPQFVRH-------IEMVQKRSIMYYQQQKSQPFLKI 205
D S+ + PQF+++ +E VQK + YQ+ K +P LKI
Sbjct: 48 --DDSYLQTL--------------PQFIKNKFDTVKDVEPVQKFEPIGYQESK-KPMLKI 90
Query: 206 VVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGK 265
P V R + +G++ G++ YE+++LF RFMID + G +
Sbjct: 91 TTFYPKNVPEIRDDV-QGLE----GIED--VYETDILFKNRFMIDKGLHGMALVSAEPAS 143
Query: 266 YRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAP--FRILSFDIECAGRKGHFPEPTH 323
T+++++ + D +II+ + E +K+ + L+FDIEC +G PEP
Sbjct: 144 ---TSESIN----DRDVKCDNIITSYNVEEINKIPNIGLKYLAFDIECLPPEGGMPEPES 196
Query: 324 DPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGV--DVMSFETERDVLLAWRDFIREVD 381
P+I +++L E + N + L C + V D+ F+ E D+L + D +E D
Sbjct: 197 SPII----MISLSFEPEYKGNNTLVL-VCKNLKDVESDIEIFDEEEDMLTRFFDIFQEYD 251
Query: 382 PDVMIGYNICKFDLPYLIEKEDVHH----SIISDL-QNGNAETRRRLAVYCL 428
PDV++GYN+ FD+PY+ ++ D + SI+ + ++G T RRL +
Sbjct: 252 PDVVVGYNMNDFDIPYIKDRADYLNNKGASIVPRVGRDGRLMTYRRLGTRTM 303
>gi|13095586|ref|NP_076501.1| DNA polymerase [Bovine herpesvirus 4]
gi|12802536|gb|AAK07928.1|AF318573_8 DNA polymerase [Bovine herpesvirus 4]
Length = 1005
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 262/518 (50%), Gaps = 47/518 (9%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R R+ YC+ D+ L LL M E+A++ +P
Sbjct: 463 QKEDVTYKEIPSLFRSGEAGRARIGSYCVLDSVLVLDLLKYFMIHVEISEIAKMAKIPAR 522
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL AK+++ ++P + G Y+GATV+ GFY PI +D
Sbjct: 523 RVLTDGQQIRVFSCLLEAAKKEHFILP--IPGAQKPGGYQGATVINPIPGFYNTPILVVD 580
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP---ECVNKTPSGETFVKSNLQKGILPEI 576
FASLYPSI+ A+NLCYST++ ++ +L P E + + FVK + K +L +
Sbjct: 581 FASLYPSIIQAHNLCYSTMIQDQNLHLHHLKPDDYETFHLSTGPIHFVKQHKTKSLLSTL 640
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
L LA RK + +L D K +LD +QLA+K++ NSVYGFTG G LPCI I+ +
Sbjct: 641 LTAWLAKRKTIRKELANCDDGPMKTILDKQQLAIKVTCNSVYGFTGVASGILPCIPIAET 700
Query: 637 VTSYGRQMIEHTKKLVE----DKFTTVGGY------EHNAEVIYGDTDSVMVQFGVPTVE 686
VT GR M+E +K VE ++ + + Y + + VIYGDTDS+ ++ ++
Sbjct: 701 VTLQGRTMLEKSKAFVEMITPERLSDIVSYPVPCDPDASFRVIYGDTDSLFIECRGYPMQ 760
Query: 687 AAMKLGREAADYISGTFIK-PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGI 745
+ + + + + K PIKLE EK + L+++KKRY G+ + DK+ KG+
Sbjct: 761 SVLNFADKLTETTTKALFKDPIKLEAEKTFQCLLMLTKKRYIGILSS-----DKLVMKGV 815
Query: 746 ETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQY------------------------VK 781
+ +R+ C V+ E L +L D ++ A QY +
Sbjct: 816 DLIRKTACSFVQTTSKEILDLVLRDPEVKQAAQYLCRQAPAKVYSDGLPVGFWKVIDVLN 875
Query: 782 STISDLLMNRMDLSLLVITKGLTKTGDDYEVKA-AHVELAERMRKRDAATAPNVGDRVPY 840
++ + L ++ + L + L++ +Y+ H+ + ++ R+ P + DR+PY
Sbjct: 876 NSYAALATGKVSVESLTFSTELSRPFGEYKTTTLPHLTVYRKIMSRNEE-LPQIHDRIPY 934
Query: 841 VIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
V IK + + +EDP YV +N IPI Y + I
Sbjct: 935 VFIKGDQRGCKSDLAEDPTYVSQNKIPISVEIYFDKLI 972
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 28/289 (9%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH-FHQILEGRMREANRNS 174
+ ++++ G T++G SVC V YFY+ P G+ ++S+ Q L G + +
Sbjct: 124 NGTVLKLLGKTQDGASVCVNVFQQMVYFYVLVPDGV---NLSYVIQQTLNGGVNKQTCKF 180
Query: 175 KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
+ Q +++ I+ P KI ++ PT + G L G + F
Sbjct: 181 SITQ--------ERKKILKEYDPSLYPVYKITLSAPTEINQLVG------NLTSCGCEVF 226
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEG 294
ESNV + RF+ID W + + ++ S LEFDC D+ E
Sbjct: 227 ---ESNVNASTRFIIDNKFSTFGWYSCS-NPHPRISQRDSRTDLEFDCGLGDLQFHEEEQ 282
Query: 295 EFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLVTLQGEKQPFIRNVMTLKSC 352
++ P+ I+SFDIEC G +G FP T D VIQ++ ++ + P +++L +C
Sbjct: 283 QW---PPYTIMSFDIECIGEQG-FPCATKDEDLVIQISCIIWTVCSESPPQNILLSLGTC 338
Query: 353 APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
PI DV F +E D+ A+ +R+ + D + GYNI FD PY+I++
Sbjct: 339 DPIANTDVYEFPSELDMFYAFFTLLRDFNIDFVTGYNIANFDFPYIIDR 387
>gi|347965478|ref|XP_003435770.1| AGAP013386-PA [Anopheles gambiae str. PEST]
gi|333470492|gb|EGK97643.1| AGAP013386-PA [Anopheles gambiae str. PEST]
Length = 2191
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 191/617 (30%), Positives = 293/617 (47%), Gaps = 56/617 (9%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
+L++L I E+A++ G+ +LSRG +V S ++R AK +N V P++ Q
Sbjct: 1582 ILNQLDLIGRTAELAKLFGIQFYEVLSRGSQFRVESMMMRIAKPRNFVSVSPSINQRAHM 1641
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPED----------- 543
+ +LE + FY PI LDF SLYPS+++AYN C+ST + +
Sbjct: 1642 RAPEYLPLILEPNSRFYADPIIVLDFQSLYPSVIIAYNYCFSTCLGRIEHLGKDTESFEF 1701
Query: 544 -ARKLNLPPE---------CVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKE 593
A +L +PP+ V +P G FVK +++G+LP +L E+L R K +K
Sbjct: 1702 GASRLRVPPKMLKALLDKNLVTFSPCGVAFVKKRVREGVLPRMLSEILNTRLMVKKSMKL 1761
Query: 594 AKD-PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKL 651
KD + + VL RQL LK+ AN YG+T A G++PC+EI SV + GR+ +E KL
Sbjct: 1762 HKDNSVLQRVLHSRQLGLKLIANVTYGYTAANFSGRMPCVEIGDSVVAKGRETLERAIKL 1821
Query: 652 VEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEF 711
VE G A+V+YGDTDS+ V + EAA K+G E A+ ++ P+KL+
Sbjct: 1822 VE------GTERWGAKVVYGDTDSLFVLCPGRSREAAFKIGEEIAEAVTNANPPPVKLKL 1875
Query: 712 EKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
EKVY P +L +KKRY G +Y + ++ + KGIETVRRD C +V ++ + L +
Sbjct: 1876 EKVYQPAILQTKKRYVGYMYESADQEKPIYEAKGIETVRRDGCPVVAKMLEKVLRILFET 1935
Query: 771 RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRK---RD 827
D+ QY + +L R++L + K G+ A V E MRK D
Sbjct: 1936 CDVSKVKQYTCRQFTKILEGRVNLQDFIFAKEF--RGESGYKPGACVPALELMRKWKLTD 1993
Query: 828 AATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIF 886
P G RVPYVII P +L N + I+ +YY+ I PL R
Sbjct: 1994 PRREPRQGQRVPYVIINGPPLVPLIRLVRSPDELLSNEGLKINANYYISKAIIPPLNRCL 2053
Query: 887 EPILKNASKE---------LLSGDHTRSISISTPSNSGIMKFAKRQLSCI-GCKALISNG 936
I +A + +L PS + +CI C +G
Sbjct: 2054 LLIGADAHQWYSELPRKTLMLHNTGGGGGGSGGPSVKITISQYFSTTNCIVDCGKQTHHG 2113
Query: 937 TLCSHCKGREAELYCKTVSQVQELE---VLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 993
+C C+ + +++V +LE VL ++ C CQ + + C S DCP+ +
Sbjct: 2114 -VCKDCRQQPQRALVHVMNKVNKLERKLVLTEKMCRSC--CQRTF--ETACISLDCPVVF 2168
Query: 994 RRKKAQKDMAEAKLQLD 1010
+ + + +A+ D
Sbjct: 2169 SLNRRELEHKQAQYYRD 2185
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQI--LEGRMREA-----N 171
+IR+FG EG C +HG PYFY+ G D ++ +I L G + +
Sbjct: 43 VIRLFGSNAEGTHSCVHIHGVFPYFYVPY-DGSVADRLAVDKKIYQLAGALDKGINVMLG 101
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
R S + + I +V+ I Y + + KI + P +V + +L G L G
Sbjct: 102 RASSQAKHIFKIVLVKGIPIYGYHRNPHH-YFKIYMYNPYLVRNATQLLMNGTILSG--- 157
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEV----------PVGKYRKTAKTLSYCQLEFD 281
S+ +E+++ + L+F ID N+ G +++E+ V R ++ + E D
Sbjct: 158 -SYQVHETHIPYILQFFIDYNLYGMSFLELDSKGLRQRTGDVEGDRNIPPKMTTSEYEID 216
Query: 282 CLYSDIISRHPEGE 295
L SDI++R P+G+
Sbjct: 217 ALASDILNREPDGK 230
>gi|195120055|ref|XP_002004544.1| GI19991 [Drosophila mojavensis]
gi|193909612|gb|EDW08479.1| GI19991 [Drosophila mojavensis]
Length = 2251
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 192/611 (31%), Positives = 285/611 (46%), Gaps = 59/611 (9%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGSEQGTYEGATVLEA 506
EMA++ G+ +LSRG +V S +LR AK KNLV P+V+Q + A ++E
Sbjct: 1654 EMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQQRAHMRAPEYLALIMEP 1713
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPE-------------- 552
+ FY P+ LDF SLYPS+++AYN C+ST + + N P E
Sbjct: 1714 ESRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGSNTPFEFGASMLRVSRQLLQ 1773
Query: 553 ------CVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLDG 605
V +P G FVK +++GILP +L E+L R K +K +D + VL
Sbjct: 1774 QLLERDLVTISPCGVVFVKREVREGILPRMLSEILDTRLMVKQSMKLHRDSSALQRVLHS 1833
Query: 606 RQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEH 664
RQL LK+ AN YG+T A G++P +E+ SV S GR+ +E KLVE +
Sbjct: 1834 RQLGLKLMANVTYGYTAANFSGRMPAVEVGDSVVSKGRETLERAIKLVET------NEKW 1887
Query: 665 NAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKK 724
N V+YGDTDS+ V A ++G E A+ ++ P+KL+ EKVY P +L +KK
Sbjct: 1888 NVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAEAVTQINPHPVKLKLEKVYQPCMLQTKK 1947
Query: 725 RYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKST 783
RY G + PE+ + + KGIETVRRD C V ++ + L + D+ QYV
Sbjct: 1948 RYVGYMYETPEQEQPVYEAKGIETVRRDGCPAVAKMLEKVLRLLFETADVSQIKQYVCRQ 2007
Query: 784 ISDLLMNRMDLSLLVITK---GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPY 840
+ LL R +L L+ K GL V A +EL + +D P G+RVP+
Sbjct: 2008 FTKLLSGRANLQDLIFAKEFRGLNGYKPTACVPA--LELTRKWMLKDPRRVPRRGERVPF 2065
Query: 841 VIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
II G + P +L N I+ YY+ I PL R +L A
Sbjct: 2066 CIINGPPGVQLIRLVRHPHEILANEGYKINAIYYITKAIIPPLNRCL--LLIGADVNDWF 2123
Query: 900 GDHTRSISISTPSNSGIMKFAKR------------QLSCIGCKALISNGTLCSHCKGREA 947
+ R + + TP+ S + R +CI + +C+ C
Sbjct: 2124 SNLPRKL-LMTPAQSTAGELLNRGNAKSTISQYFSTTNCIIECGRQTKAGICAECARMPT 2182
Query: 948 ELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY-----RRKKAQKDM 1002
+ +++ +L+ + CQ C G L D+ C S DCP+ Y RR+ Q
Sbjct: 2183 KCVVTLQAKLAQLDRGYRLTQQICQACCGRLG-DLQCGSLDCPVLYVLEVKRRELQQMPF 2241
Query: 1003 AEAKLQLDRWN 1013
+L+ +R+N
Sbjct: 2242 IRKQLE-ERFN 2251
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 25/163 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------- 170
I+RIFG G C VHG PYFYI P D F + G ++ A
Sbjct: 43 IVRIFGANANGQKCCMHVHGVFPYFYI-------PYDKRDFETVERGILQIAMHLDKAIN 95
Query: 171 ---NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
+ S Q V I++V+ Y + + Q F KI + P V +L G L+
Sbjct: 96 ISLGQGSSNAQHVFKIQLVKGIPFYGYHRTEHQ-FFKIFMFNPRFVRRAANLLQSGAILN 154
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP--VGKYRK 268
++F +ES+V + L+FMID N+ G +++ VP V K+R+
Sbjct: 155 ----RNFNPHESHVPYILQFMIDYNLYGMSYLHVPLEVVKFRR 193
>gi|294496641|ref|YP_003543134.1| replicative DNA polymerase I [Methanohalophilus mahii DSM 5219]
gi|292667640|gb|ADE37489.1| replicative DNA polymerase I [Methanohalophilus mahii DSM 5219]
Length = 918
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 288/546 (52%), Gaps = 61/546 (11%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y +D+ L LL +L + ++ +++V+G + ++S GQ+ V LL + ++N V+
Sbjct: 368 YARRDSELALELLMQLKLLDKHIAVSQVSGTLLQDVISGGQTNMVEQLLLSEYGKQNRVM 427
Query: 486 PNVKQAGSEQG------TYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
+ + Q +G VLE G +E + LD+ SLYP+I+MA+NLCY+T+V
Sbjct: 428 SSKPDEHTSQQRRKLNENLKGGAVLEPHKGLHEN-VLVLDYKSLYPTIIMAHNLCYTTVV 486
Query: 540 TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE 599
ED NL + + +P+G+ FVK +L KGI+P +LE+LL R K +K+ +D +
Sbjct: 487 --EDT---NLKTDDLIISPTGDKFVKPHLYKGIVPSVLEDLLRRRSETKQIMKKTRDENQ 541
Query: 600 KAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLV------- 652
VLD QLALKI NS YG++G +L + ++ SVTS GR+ I T+++V
Sbjct: 542 HRVLDATQLALKILLNSFYGYSGYARARLYSLGMAGSVTSIGRENIARTEEIVCSQIGSV 601
Query: 653 ---------EDKFTTVGGYEH--NAEVIYGDTDSVMVQF----------GVPTVEAAMKL 691
D+ +G + N ++YGDTDSV V T+E + ++
Sbjct: 602 VLRNDEVYFRDEAGEIGSDDKKVNLSIVYGDTDSVFVHCMDRDNRELSPDDLTLEESARV 661
Query: 692 GREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKF--DKMDTKGIETVR 749
G + A ++ + P++LEFE LL++KKRYA + E DK+ KG+ETVR
Sbjct: 662 GSKVASLVTASLPDPMELEFEATARRVLLVAKKRYAQWLFEPAEGGWKDKIKVKGLETVR 721
Query: 750 RDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTIS-----DLLMNRMDLSLLVITKGLT 804
RD C L N++ L +L + ++ AV++VK+T+ D+ + + LV+TK +
Sbjct: 722 RDWCELTSNMLNRVLEYVLKEGNVEKAVEHVKTTVDRVRNLDVTRDSDIIDDLVLTKTFS 781
Query: 805 KTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN 864
K+ Y+ K H+ + E++ +R P++G+R+P+VI+ A R+EDP YV ++
Sbjct: 782 KSPSSYKNKQPHLTVVEKIEQR-TGMRPSIGERIPFVIV--AGKDLFVNRAEDPDYVRQH 838
Query: 865 NIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQL 924
NI +D YY++ Q+ P+ RI N + + DH G+ F+K +
Sbjct: 839 NIALDVDYYIQKQLLPPVERILSVFGVN----MATLDH-------DSRQKGLFDFSKSKP 887
Query: 925 SCIGCK 930
S GC+
Sbjct: 888 SDNGCQ 893
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 162/346 (46%), Gaps = 57/346 (16%)
Query: 93 FQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMG 152
FQ +D DY D+ + +IR+FG + EG S+CC+V GFEPYFY++C
Sbjct: 11 FQLIDADYFRQDN-----------SPVIRLFGRSSEGKSICCQVPGFEPYFYVNCNA--- 56
Query: 153 PDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM 212
D+ ++ + + V+ IE V++ + YQ + LKI+ P
Sbjct: 57 --DLEQVASDIKQKFEQ----------VKAIEEVERFEPVGYQTTPIR-MLKIITHDPGN 103
Query: 213 VASCRGILDRGIQLDGLGMKSFM-TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
V R D M + YE+++LF RF+ID N+ G W+ + ++ +
Sbjct: 104 VPEIRD--------DIATMPAVKEIYEADILFRNRFLIDRNLHGMGWMRLTP---QEPLQ 152
Query: 272 TLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVAN 331
L C + C D+ E E + AP R L+FDIEC G+ P P PVI ++
Sbjct: 153 NLPLCNIT--CSSEDV----EEFERKEPAPLRHLAFDIECLPVDGNMPTPETSPVIMISI 206
Query: 332 LV--TLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYN 389
QG++ ++ + A V DV + + E +L + + RE DPDV+ GYN
Sbjct: 207 SFAPAYQGKE-----TIVLIAKPADGVDTDVETCQDEASMLSRFFEIFREYDPDVVTGYN 261
Query: 390 ICKFDLPYLIEKEDV----HHSIISDL-QNGNAETRRRLAVYCLKD 430
FD+PY+ ++ + H IISD+ ++G + R++ + D
Sbjct: 262 SNDFDIPYVTDRVSILNKNGHRIISDVGRDGRSLAYRKIGTRTMVD 307
>gi|190887005|gb|ACE95568.1| DNA polymerase [Muromegalovirus C4A]
Length = 1096
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/567 (30%), Positives = 273/567 (48%), Gaps = 89/567 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV--------------------------KQAGS 493
++ GQ I++ + LL + +++++PN+ S
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHEAAAAIEEAAGGEGDETSEGENSNNS 597
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DARK 546
Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D +
Sbjct: 598 RTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVLR 657
Query: 547 LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGR 606
+ + +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D +
Sbjct: 658 VEIGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDKQ 710
Query: 607 QLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTVG 660
QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV
Sbjct: 711 QLALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTVL 770
Query: 661 GYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLEF 711
G A ++IYGDTDSV F EA +K +G AA+ + F +P++LEF
Sbjct: 771 GLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLEF 830
Query: 712 EKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDR 771
EK++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D
Sbjct: 831 EKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFNDE 886
Query: 772 DIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--------------- 815
+ G ++ + T DL N + + L + DD +K
Sbjct: 887 TVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQEL 946
Query: 816 ---------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVLE 863
H+ + R+ R P VGDRV YV+ K YE +EDP +V+E
Sbjct: 947 SCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVVE 1005
Query: 864 NNIPIDTHYYLENQISKPLLRIFEPIL 890
+ I+ Y E Q+ K + P+
Sbjct: 1006 AKLSINAEKYYE-QVVKAVTNTLMPVF 1031
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 149/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P S +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPSGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|353237439|emb|CCA69412.1| probable catalytic subunit of DNA polymerase zeta UPR-1
[Piriformospora indica DSM 11827]
Length = 1531
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 193/633 (30%), Positives = 301/633 (47%), Gaps = 54/633 (8%)
Query: 415 GNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQL 474
G+ R+ Y A + +LD+ F+ E ARV G+ ++SRG KV S +
Sbjct: 890 GSTSEASRVLSYIADLASIVLEILDETQFVTKTSEFARVFGIDFFSVISRGSQFKVESFM 949
Query: 475 LRKAKQKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYN 532
LR AK ++ V+ P+ Q G + G ++E + FY+ P+ LDF SLYPS+M+AYN
Sbjct: 950 LRIAKPESFVLISPSRAQVGKQNGAECMPLIMEPASAFYKSPLLVLDFQSLYPSVMVAYN 1009
Query: 533 LCYST-LVTPEDAR---------KLNLPPECVNK-------TPSGETFVKSNLQKGILPE 575
CYST L +D + L +P + K P+G +VK +++K +L +
Sbjct: 1010 YCYSTCLGRIKDFKGQNKFGVLDNLEIPAGTLEKLKDHLTIAPNGMIYVKPSVRKSLLAK 1069
Query: 576 ILEELLAARKRAKADLKEAKDPLEKA---VLDGRQLALKISANSVYGFTGATV-GQLPCI 631
+L ELL R K +K A + KA VLD RQL+LK N YG+T A+ G++P +
Sbjct: 1070 MLTELLDTRVMVKQGMKLAGN--NKALLRVLDARQLSLKFICNVTYGYTSASFSGRMPAV 1127
Query: 632 EISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKL 691
E++ S+ GR+ +E L+E T+ G A V+YGDTDS+ V T E A +
Sbjct: 1128 EVADSIVQSGRETLEKAIHLIES--TSKWG----AHVVYGDTDSLFVYLPGKTKEQAFVI 1181
Query: 692 GREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRR 750
G + A+ ++ + P+KL+FEKVY P +L++KKRY G + +P++ + D KGIETVRR
Sbjct: 1182 GNQIANAVTASNPSPVKLKFEKVYLPSVLLAKKRYVGFKYEDPDEIQPEFDAKGIETVRR 1241
Query: 751 DNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL-TKTGDD 809
D + +V L + +D+ Y + +L R + + K + T D
Sbjct: 1242 DGIPAGQKMVETSLKILFRTQDLSEVKAYCWRNWTRILEGRFSIQDFIFAKEVRMGTYSD 1301
Query: 810 YEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL--ENNIP 867
+A D G+RV +VI +AA G + +R P +L E +
Sbjct: 1302 KVAPQPGAAIAAARMAEDPNDEVQYGERVRFVITRAAPGQRLSDRCVAPEELLFDETGMQ 1361
Query: 868 IDTHYYLENQISKPLLRIFEPI---LKNASKEL-----LSGDHTRSISISTP-SNSGIMK 918
+DT YY+ N++ PL RIF + ++ E+ + G ++ I TP +G K
Sbjct: 1362 LDTQYYVANRLIPPLARIFNLVGVDVQGWFDEMPKPQKMEGQPKQAYDIDTPFKYTGGRK 1421
Query: 919 FAKRQLS--------CIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQ 970
K Q C+ C+ I+N +C C + S++ E
Sbjct: 1422 GPKVQKIESHFASNLCMVCEN-ITNEDVCPTCLAAPESTIYELKSRLHTAEQKRNECQIV 1480
Query: 971 CQECQGSLHQD-VLCTSRDCPIFYRRKKAQKDM 1002
C C G D + C S +C Y R K K++
Sbjct: 1481 CASCSGVAPADPIRCESLECEWLYSRVKYSKEV 1513
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 24/191 (12%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-----NRN 173
++RIFG T G C VH PYFYIS + P+ ++ + L + A NRN
Sbjct: 48 VVRIFGTTSGGERACLHVHQVFPYFYISYEGSLNPEAVNRYISRLHHALNSAIAISLNRN 107
Query: 174 SK--VPQFVRHIEMVQKRSIMYYQ-QQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
+ + QFVR I +V + I +Y PFLKI++ +P ++ IL G + G
Sbjct: 108 HQNALGQFVRAIVLV--KGIHFYGFHVGYSPFLKIMLTIPDQISRAILILQSGSVM-GRK 164
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQ----------LEF 280
M F E+++ + L+FM D N+ G +W+++ YR + Q LEF
Sbjct: 165 MNVF---EAHLSYPLQFMCDFNLYGCDWVDLRDVHYRTPRNSDDIEQPLYHPTTSMPLEF 221
Query: 281 DCLYSDIISRH 291
D +I++RH
Sbjct: 222 DVASYNILNRH 232
>gi|44491803|gb|AAS47480.1| DNA polymerase [Murid herpesvirus 4]
gi|124248160|emb|CAJ86578.1| catalytic subunit of DNA polymerase [Murine cytomegalovirus (strain
K181)]
Length = 1097
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 273/568 (48%), Gaps = 90/568 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV---------------------------KQAG 492
++ GQ I++ + LL + +++++PN+
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHEAAAAIEEAAAGGEGDETSEGENSNN 597
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DAR 545
S Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D
Sbjct: 598 SRTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVL 657
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDG 605
++ + +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D
Sbjct: 658 RVEIGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDK 710
Query: 606 RQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTV 659
+QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV
Sbjct: 711 QQLALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTV 770
Query: 660 GGYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLE 710
G A ++IYGDTDSV F EA +K +G AA+ + F +P++LE
Sbjct: 771 LGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLE 830
Query: 711 FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
FEK++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D
Sbjct: 831 FEKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFND 886
Query: 771 RDIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA-------------- 815
+ G ++ + T DL N + + L + DD +K
Sbjct: 887 ETVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQE 946
Query: 816 ----------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVL 862
H+ + R+ R P VGDRV YV+ K YE +EDP +V+
Sbjct: 947 LSCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVV 1005
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPIL 890
E + I+ Y E Q+ K + P+
Sbjct: 1006 EAKLSINAEKYYE-QVVKAVTNTLMPVF 1032
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 149/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P S +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPSGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVGDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|371782343|emb|CCE56566.1| M54 protein [Murid herpesvirus 1]
Length = 1096
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/567 (30%), Positives = 273/567 (48%), Gaps = 89/567 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV--------------------------KQAGS 493
++ GQ I++ + LL + +++++PN+ S
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHEAAAAIEEAAGGEGDETSEGENSNNS 597
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DARK 546
Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D +
Sbjct: 598 RTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVLR 657
Query: 547 LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGR 606
+ + +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D +
Sbjct: 658 VEIGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDKQ 710
Query: 607 QLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTVG 660
QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV
Sbjct: 711 QLALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTVL 770
Query: 661 GYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLEF 711
G A ++IYGDTDSV F EA +K +G AA+ + F +P++LEF
Sbjct: 771 GLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLEF 830
Query: 712 EKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDR 771
EK++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D
Sbjct: 831 EKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFNDE 886
Query: 772 DIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--------------- 815
+ G ++ + T DL N + + L + DD +K
Sbjct: 887 TVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQEL 946
Query: 816 ---------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVLE 863
H+ + R+ R P VGDRV YV+ K YE +EDP +V+E
Sbjct: 947 SCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVVE 1005
Query: 864 NNIPIDTHYYLENQISKPLLRIFEPIL 890
+ I+ Y E Q+ K + P+
Sbjct: 1006 AKLSINAEKYYE-QVVKAVTNTLMPVF 1031
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 149/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|190886676|gb|ACE95241.1| DNA polymerase [Muromegalovirus G4]
Length = 1094
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 272/565 (48%), Gaps = 87/565 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV------------------------KQAGSEQ 495
++ GQ I++ + LL + ++L++P + S
Sbjct: 538 KVIFDGQQIRIYTCLLEECSSRDLILPTMPSLGDEAAAAIEAAGEGDETSEGENSNNSRT 597
Query: 496 GTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DARKLN 548
Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D ++
Sbjct: 598 VGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVLRVE 657
Query: 549 LPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQL 608
+ +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D +QL
Sbjct: 658 IGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDKQQL 710
Query: 609 ALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTVGGY 662
ALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV G
Sbjct: 711 ALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTVLGL 770
Query: 663 EHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLEFEK 713
A ++IYGDTDSV F EA +K +G AA+ + F +P++LEFEK
Sbjct: 771 PPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLEFEK 830
Query: 714 VYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D +
Sbjct: 831 MFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFNDETV 886
Query: 774 P-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA----------------- 815
G ++ + T DL N + + L + DD +K
Sbjct: 887 SEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQELSC 946
Query: 816 -------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVLENN 865
H+ + R+ R P VGDRV YV+ K YE +EDP +V+E
Sbjct: 947 YKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVVEAK 1005
Query: 866 IPIDTHYYLENQISKPLLRIFEPIL 890
+ I+ Y E Q+ K + P+
Sbjct: 1006 LSINAEKYYE-QVVKAVTNTLMPVF 1029
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 149/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P S +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPSGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|448522872|ref|XP_003868799.1| Rev3 protein [Candida orthopsilosis Co 90-125]
gi|380353139|emb|CCG25895.1| Rev3 protein [Candida orthopsilosis]
Length = 1719
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 204/692 (29%), Positives = 333/692 (48%), Gaps = 72/692 (10%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLAVY 426
R +L WR E+ N+C L + + +H I LQ+G + + +Y
Sbjct: 1046 RHILNVWRILKSELALTSYTLENVCYHLLHRSLPRYSLHQ-ISQWLQSGKFKDIQVAFLY 1104
Query: 427 CLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI- 485
++ L +++ I VE +R+ G+ + RG KV S L R +K +++++
Sbjct: 1105 YMRRIELTLKIISVRELITRNVEHSRLIGIEFNSNFYRGSQYKVESILSRISKTESILLN 1164
Query: 486 -PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV----- 539
P+ Q + +LE +A FY+ P+ LDF SLYPSIM+AYN CYSTL+
Sbjct: 1165 SPSKMQVHEMRPIECIPLILEPKANFYKSPLVVLDFQSLYPSIMIAYNYCYSTLIGKLHN 1224
Query: 540 -TPEDA-----RKLNLPP---------ECVNKTPSGETFVKSNLQKGILPEILEELLAAR 584
P+ + NLPP + VN +P+G FVKS+++K IL ++LEE+L R
Sbjct: 1225 FKPKKNNIGYLKNHNLPPGLVDLLTTDDAVNVSPNGFAFVKSHVRKSILAKMLEEILNIR 1284
Query: 585 KRAKADLKEAKDPLEKAVL-DGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGR 642
+ K+ +K KD E L + RQ+ALK+ AN YG+ AT G++P +I+ ++ S GR
Sbjct: 1285 IKTKSVMKLFKDDTELTKLYNARQIALKLIANVTYGYASATFSGRMPNSDIADAIVSTGR 1344
Query: 643 QMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT 702
++++ + +++E G Y A+V+YGDTDS+ V F + A K GRE A ++
Sbjct: 1345 EILDKSIEMIES-----GDY--GAKVVYGDTDSLFVYFPGKSKAEAFKSGREIAKMVTNH 1397
Query: 703 FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEK-FDKMDTKGIETVRRDNCLLVKNLVT 761
F PI+L+FEK Y+P +L++KKRY G + + K D KGIETVRRD + +
Sbjct: 1398 FPDPIQLKFEKAYHPCVLLAKKRYVGYSFEYENQVMPKFDAKGIETVRRDGIPAQQKMTE 1457
Query: 762 ECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD--DYEVKAAHVEL 819
+ L + +D+ QY + N++ ++ K + + G+ D L
Sbjct: 1458 KALRILFETKDLSKVKQYTLKQFLKIFNNKIAINDFCFAKEV-RYGNYKDERYLPPGALL 1516
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYER---SEDPIYVLENNIP--IDTHYYL 874
A + + D P +RVPYV+ + + + +R ED I P +D YY+
Sbjct: 1517 ASKAVEDDPRKEPQYKERVPYVVTRDSTKVRIKDRVMFPEDFIKTFSTAEPLTLDYEYYI 1576
Query: 875 ENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIM---KFAKRQLSCIG 928
+ PL RIF + ++ KEL TRS IS S+S ++ + R+ C
Sbjct: 1577 TRVLIPPLERIFNLMGADVRGWYKEL--PKFTRSNIISVFSDSCLICGSRLDGREYVCSK 1634
Query: 929 C----KALISNGTLCSHCKGR-----EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLH 979
C + L++N T+ CK + E E C+ SQ ++ H
Sbjct: 1635 CSQDERQLVTNVTMT--CKNKQEKVVEIENTCRNCSQ---------NVFASGVNVSQYTH 1683
Query: 980 QDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDR 1011
C +RDC ++Y + K ++ + + D+
Sbjct: 1684 D---CINRDCSVYYSKVKVGQEAKQLFTRRDK 1712
>gi|349581651|dbj|GAA26808.1| K7_Rev3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1504
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 192/702 (27%), Positives = 322/702 (45%), Gaps = 70/702 (9%)
Query: 365 TERDVLLAWRDFIREVDPDVMI----GYNICKFDLPYLIEKEDVHHSIISDLQNGNAETR 420
T R ++ WR +V+ +NI LP+ ++++ N T
Sbjct: 819 TGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHF------SFESLTNMWNAKKSTT 872
Query: 421 RRLAV--YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKA 478
V Y L A + +LL K +I +E AR+ G+ + RG KV S L+R
Sbjct: 873 ELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRIC 932
Query: 479 KQKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYS 536
K ++ ++ P K ++ V+E + FY+ P+ LDF SLYPSIM+ YN CYS
Sbjct: 933 KSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCYS 992
Query: 537 TLV--------TPED--ARKLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEE 579
T++ T + K +LP V P+G + K++++K L ++L +
Sbjct: 993 TMIGRVREINLTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKMLTD 1052
Query: 580 LLAARKRAKADLKEAKD--PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSS 636
+L R K + E D K +L+ +QLALK+ AN YG+T A+ G++PC +++ S
Sbjct: 1053 ILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSASFSGRMPCSDLADS 1112
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+ GR+ +E ++E T NA+V+YGDTDS+ V T A +G A
Sbjct: 1113 IVQTGRETLEKAIDIIEKDET------WNAKVVYGDTDSLFVYLPGKTAIEAFSIGHAMA 1166
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLL 755
+ ++ KPI L+FEKVY+P +LISKKRY G + +P + D KGIETVRRD
Sbjct: 1167 ERVTQNNPKPIFLKFEKVYHPSILISKKRYVGFSYESPSQTLPIFDAKGIETVRRDGIPA 1226
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA- 814
+ ++ +C+ + +D+ +Y+++ + + ++ K + E A
Sbjct: 1227 QQKIIEKCIRLLFQTKDLSKIKKYLQNEFFKIQIGKVSAQDFCFAKEVKLGAYKSEKTAP 1286
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYY 873
A + +R D P +R+PY+++K +G ER P LE N+ +D+ YY
Sbjct: 1287 AGAVVVKRRINEDHRAEPQYKERIPYLVVKGKQGQLLRERCVSPEEFLEGENLELDSEYY 1346
Query: 874 LENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK 930
+ + PL R+F I + N ++E++ + + + + + A +C C
Sbjct: 1347 INKILIPPLDRLFNLIGINVGNWAQEIVKSKRASTTATKVENITRVGTSA----TCCNCG 1402
Query: 931 ---ALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV----- 982
I + LC C + + + + + + + L T C+ C D
Sbjct: 1403 EELTKICSLQLCDDCLEKRSTTTLSFLIKKLKRQKEYETLKTVCRTCSYRYTSDAGIEND 1462
Query: 983 ----LCTSRDCPIFYRRKKAQKDM--------AEAKLQLDRW 1012
C S DCP+FY R KA++ + EA + L+ W
Sbjct: 1463 HIASKCNSYDCPVFYSRVKAERYLRDNQSVQREEALISLNDW 1504
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 105 SNRELLPLSSGSAA-IIRIFGVTREGHSVCCKVHGFEPYFYISCP-QGMGPDDISH---- 158
S+ E LPL+ S IR+FG GH V C VHG PY +I Q + H
Sbjct: 43 SHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPYMFIKYDGQITDTSTLRHQRCA 102
Query: 159 -FHQILEGRMREANRNSKVPQ------------FVRHIEMVQKRSIMYYQQQKS-QPFLK 204
H+ LE ++R + + K + FV + +V + I +Y F K
Sbjct: 103 QVHKTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVV--KGIPFYGYHVGWNLFYK 160
Query: 205 IVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVG 264
I + P SC + I+ + K F YES++ + L++ D N+ G +WI V
Sbjct: 161 ISLLNP----SCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINVDRC 216
Query: 265 KYR 267
+R
Sbjct: 217 YFR 219
>gi|44491799|gb|AAS47478.1| DNA polymerase [Murid herpesvirus 4]
gi|157676161|emb|CAP08103.1| M54 protein [Murine cytomegalovirus (strain K181)]
gi|371782671|emb|CCE56896.1| M54 protein [Murid herpesvirus 1]
gi|371782836|emb|CCE57061.1| M54 protein [Murid herpesvirus 1]
Length = 1097
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 273/568 (48%), Gaps = 90/568 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV---------------------------KQAG 492
++ GQ I++ + LL + +++++PN+
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHEAAAAIEEAAAGGEGDETSEGENSNN 597
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DAR 545
S Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D
Sbjct: 598 SRTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVL 657
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDG 605
++ + +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D
Sbjct: 658 RVEIGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDK 710
Query: 606 RQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTV 659
+QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV
Sbjct: 711 QQLALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTV 770
Query: 660 GGYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLE 710
G A ++IYGDTDSV F EA +K +G AA+ + F +P++LE
Sbjct: 771 LGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLE 830
Query: 711 FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
FEK++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D
Sbjct: 831 FEKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFND 886
Query: 771 RDIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA-------------- 815
+ G ++ + T DL N + + L + DD +K
Sbjct: 887 ETVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQE 946
Query: 816 ----------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVL 862
H+ + R+ R P VGDRV YV+ K YE +EDP +V+
Sbjct: 947 LSCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVV 1005
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPIL 890
E + I+ Y E Q+ K + P+
Sbjct: 1006 EAKLSINAEKYYE-QVVKAVTNTLMPVF 1032
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 149/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P S +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPSGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|151942632|gb|EDN60978.1| DNA polymerase zeta subunit [Saccharomyces cerevisiae YJM789]
Length = 1504
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 192/702 (27%), Positives = 322/702 (45%), Gaps = 70/702 (9%)
Query: 365 TERDVLLAWRDFIREVDPDVMI----GYNICKFDLPYLIEKEDVHHSIISDLQNGNAETR 420
T R ++ WR +V+ +NI LP+ ++++ N T
Sbjct: 819 TGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHF------SFESLTNMWNAKKSTT 872
Query: 421 RRLAV--YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKA 478
V Y L A + +LL K +I +E AR+ G+ + RG KV S L+R
Sbjct: 873 ELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRIC 932
Query: 479 KQKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYS 536
K ++ ++ P K ++ V+E + FY+ P+ LDF SLYPSIM+ YN CYS
Sbjct: 933 KSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCYS 992
Query: 537 TLV--------TPED--ARKLNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEE 579
T++ T + K +LP V P+G + K++++K L ++L +
Sbjct: 993 TMIGRVREINLTENNLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKMLTD 1052
Query: 580 LLAARKRAKADLKEAKD--PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSS 636
+L R K + E D K +L+ +QLALK+ AN YG+T A+ G++PC +++ S
Sbjct: 1053 ILDVRVMIKKTMNEIGDDNTTLKRLLNNKQLALKLLANVTYGYTSASFSGRMPCSDLADS 1112
Query: 637 VTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAA 696
+ GR+ +E ++E T NA+V+YGDTDS+ V T A +G A
Sbjct: 1113 IVQTGRETLEKAIDIIEKDET------WNAKVVYGDTDSLFVYLPGKTAIEAFSIGHAMA 1166
Query: 697 DYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNP-EKFDKMDTKGIETVRRDNCLL 755
+ ++ KPI L+FEKVY+P +LISKKRY G + +P + D KGIETVRRD
Sbjct: 1167 ERVTQNNPKPIFLKFEKVYHPSILISKKRYVGFSYESPSQTLPIFDAKGIETVRRDGIPA 1226
Query: 756 VKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA- 814
+ ++ +C+ + +D+ +Y+++ + + ++ K + E A
Sbjct: 1227 QQKIIEKCIRLLFQTKDLSKIKKYLQNEFFKIQIGKVSAQDFCFAKEVKLGAYKSEKTAP 1286
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYY 873
A + +R D P +R+PY+++K +G ER P LE N+ +D+ YY
Sbjct: 1287 AGAVVVKRRINEDHRAEPQYKERIPYLVVKGKQGQLLRERCVSPEEFLEGENLELDSEYY 1346
Query: 874 LENQISKPLLRIFEPI---LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCK 930
+ + PL R+F I + N ++E++ + + + + + A +C C
Sbjct: 1347 INKILIPPLDRLFNLIGINVGNWAQEIVKSKRASTTATKVENITRVGTSA----TCCNCG 1402
Query: 931 ---ALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV----- 982
I + LC C + + + + + + + L T C+ C D
Sbjct: 1403 EELTKICSLQLCDDCLEKRSTTTLSFLIKKLKRQKEYETLKTVCRTCSYRYTSDAGIEND 1462
Query: 983 ----LCTSRDCPIFYRRKKAQKDM--------AEAKLQLDRW 1012
C S DCP+FY R KA++ + EA + L+ W
Sbjct: 1463 HIASKCNSYDCPVFYSRVKAERYLRDNQSVQREEALISLNDW 1504
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 105 SNRELLPLSSGSAA-IIRIFGVTREGHSVCCKVHGFEPYFYISCP-QGMGPDDISH---- 158
S+ E LPL+ S IR+FG GH V C VHG PY +I Q + H
Sbjct: 43 SHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPYMFIKYDGQITDTSTLRHQRCA 102
Query: 159 -FHQILEGRMREANRNSKVPQ------------FVRHIEMVQKRSIMYYQQQKS-QPFLK 204
H+ LE ++R + + K + FV + +V + I +Y F K
Sbjct: 103 QVHKTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVV--KGIPFYGYHVGWNLFYK 160
Query: 205 IVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVG 264
I + P SC + I+ + K F YES++ + L++ D N+ G +WI V
Sbjct: 161 ISLLNP----SCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINVNRC 216
Query: 265 KYR 267
+R
Sbjct: 217 YFR 219
>gi|371782509|emb|CCE56732.1| M54 protein [Murid herpesvirus 1]
Length = 1097
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 273/568 (48%), Gaps = 90/568 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV---------------------------KQAG 492
++ GQ I++ + LL + +++++PN+
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHEAAAAIEEAAAGGEGDETSEGENSNN 597
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DAR 545
S Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D
Sbjct: 598 SRTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVL 657
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDG 605
++ + +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D
Sbjct: 658 RVEIGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDK 710
Query: 606 RQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTV 659
+QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV
Sbjct: 711 QQLALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTV 770
Query: 660 GGYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLE 710
G A ++IYGDTDSV F EA +K +G AA+ + F +P++LE
Sbjct: 771 LGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLE 830
Query: 711 FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
FEK++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D
Sbjct: 831 FEKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFND 886
Query: 771 RDIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA-------------- 815
+ G ++ + T DL N + + L + DD +K
Sbjct: 887 ETVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQE 946
Query: 816 ----------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVL 862
H+ + R+ R P VGDRV YV+ K YE +EDP +V+
Sbjct: 947 LSCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVV 1005
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPIL 890
E + I+ Y E Q+ K + P+
Sbjct: 1006 EAKLSINAEKYYE-QVVKAVTNTLMPVF 1032
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 149/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|299472827|emb|CBN80395.1| EsV-1-93 [Ectocarpus siliculosus]
Length = 1047
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 171/458 (37%), Positives = 254/458 (55%), Gaps = 39/458 (8%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAV---YCLKDAYLPQRLLDKLMFIFNYVEMARVTGV 456
+K+DV ++ I LQ ++ ++L V YC +D+ L +LLDK+ +++ EMA++ V
Sbjct: 390 KKDDVTYTDI--LQACTSKDPKKLGVIAKYCYQDSGLVLKLLDKIKEVYDATEMAKLCTV 447
Query: 457 PISFLLSRGQSIKVLSQLLRKAKQK---NLVIPNVKQAGSEQGT----YEGATVLEARAG 509
P+++++ RGQ IK +S +L + + N V+ K A + Y+GA+V++A+ G
Sbjct: 448 PLTYIVGRGQQIKCMSLILNRIHGEYVCNYVVAKKKVAADGKQVLNEGYKGASVIDAKKG 507
Query: 510 FYEK-PIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGE--TFVKS 566
FYEK P+ T+DFASLYPSIM LCY+T+V R + ++ G TF
Sbjct: 508 FYEKDPVVTMDFASLYPSIMRLKQLCYTTIVKDVKYRGIEGVTYEDHQISDGVSVTFAHR 567
Query: 567 NLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGA-TV 625
+ + IL E+ E L RK K +K KDP ++LD +Q A K++ NS+YGFTG
Sbjct: 568 SGSRSILCELEEMLGEERKATKKLMKSEKDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNN 627
Query: 626 GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQF----G 681
G LP +EI+++VTS GR MI+ TK+ E EH VIYGDTDSVMV F
Sbjct: 628 GMLPLVEIAAAVTSTGRDMIKRTKEYAEK--------EHGCNVIYGDTDSVMVIFPEHRK 679
Query: 682 VPTVEAAMK----LGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKF 737
+ + M+ +G + + IS F PI LEFE +Y+ YLL+SKKRYAGL W E
Sbjct: 680 IENLGDKMRYCFDMGTKVSKEISEMFGHPILLEFENIYFKYLLVSKKRYAGLSWETVEGP 739
Query: 738 DKMDTKGIETVRRDNCLLVKNLVTECLHKILVD---RDIPGAV-QYVKSTISDLLMNRMD 793
M KG+ TVRRDN V +E +H +L+D D GAV +++ T+ L ++
Sbjct: 740 PTMTMKGLVTVRRDNAPFVGRCASEAIH-MLMDVGVTDGRGAVKKHLTETLLQLERGQIS 798
Query: 794 LSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATA 831
+ L I K L + Y+ + H LA ++ +R A
Sbjct: 799 IEDLTIRKELKQWV--YKTPSPHATLALKILERTKEQA 834
>gi|44491807|gb|AAS47482.1| DNA polymerase [Murid herpesvirus 4]
Length = 1094
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 272/565 (48%), Gaps = 87/565 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV------------------------KQAGSEQ 495
++ GQ I++ + LL + ++L++P + S
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDLILPTMPSLGDEAAAAIEAAGEGDETSEGENSNNSRT 597
Query: 496 GTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DARKLN 548
Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D ++
Sbjct: 598 VGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVLRVE 657
Query: 549 LPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQL 608
+ +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D +QL
Sbjct: 658 IGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDKQQL 710
Query: 609 ALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTVGGY 662
ALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV G
Sbjct: 711 ALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTVLGL 770
Query: 663 EHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLEFEK 713
A ++IYGDTDSV F EA +K +G AA+ + F +P++LEFEK
Sbjct: 771 PPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLEFEK 830
Query: 714 VYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D +
Sbjct: 831 MFVSLMMICKKRYIGKVLGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFNDETV 886
Query: 774 P-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA----------------- 815
G ++ + T DL N + + L + DD +K
Sbjct: 887 SEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQELSC 946
Query: 816 -------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVLENN 865
H+ + R+ R P VGDRV YV+ K YE +EDP +V+E
Sbjct: 947 YKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVVEAK 1005
Query: 866 IPIDTHYYLENQISKPLLRIFEPIL 890
+ I+ Y E Q+ K + P+
Sbjct: 1006 LSINAEKYYE-QVVKAVTNTLMPVF 1029
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 147/359 (40%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RARGWCRGPFP-------DELHFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG S+C V G + YFY C + D + + I + VP+ F
Sbjct: 130 ATEEGVSICVNVFGQKAYFY--CERTQSEDLKNIVYDIAD----------TVPEPRSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMVE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W V + A +S QLE DC +DI+ P E +
Sbjct: 229 VDPLARFLIDKKIPSFGWC-VARRYSVRAAGHVSRAQLEIDCDVADIL---PIEEQTNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVSHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDTKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|371783165|emb|CCE57390.1| M54 protein [Murid herpesvirus 1]
Length = 1098
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 171/569 (30%), Positives = 273/569 (47%), Gaps = 91/569 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV----------------------------KQA 491
++ GQ I++ + LL + +++++PN+
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHEAAAAAIEEAAAGGEGDETSEGENSN 597
Query: 492 GSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DA 544
S Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D
Sbjct: 598 NSRTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDV 657
Query: 545 RKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLD 604
++ + +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D
Sbjct: 658 LRVEIGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMD 710
Query: 605 GRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTT 658
+QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ T
Sbjct: 711 KQQLALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRT 770
Query: 659 VGGYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKL 709
V G A ++IYGDTDSV F EA +K +G AA+ + F +P++L
Sbjct: 771 VLGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRL 830
Query: 710 EFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILV 769
EFEK++ ++I KKRY G + + KG++ VRR C VK +V++ LH +
Sbjct: 831 EFEKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFN 886
Query: 770 DRDIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA------------- 815
D + G ++ + T DL N + + L + DD +K
Sbjct: 887 DETVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQ 946
Query: 816 -----------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYV 861
H+ + R+ R P VGDRV YV+ K YE +EDP +V
Sbjct: 947 ELSCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHV 1005
Query: 862 LENNIPIDTHYYLENQISKPLLRIFEPIL 890
+E + I+ Y E Q+ K + P+
Sbjct: 1006 VEAKLSINAEKYYE-QVVKAVTNTLMPVF 1033
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 149/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CEKMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|44491797|gb|AAS47477.1| DNA polymerase [Murid herpesvirus 4]
Length = 1094
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 272/565 (48%), Gaps = 87/565 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV------------------------KQAGSEQ 495
++ GQ I++ + LL + ++L++P + S
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDLILPTMPSLGDEAAAAIEAAGEGDETSEGENSNNSRT 597
Query: 496 GTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DARKLN 548
Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D ++
Sbjct: 598 VGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVLRVE 657
Query: 549 LPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQL 608
+ +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D +QL
Sbjct: 658 IGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDKQQL 710
Query: 609 ALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTVGGY 662
ALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV G
Sbjct: 711 ALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTVLGL 770
Query: 663 EHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLEFEK 713
A ++IYGDTDSV F EA +K +G AA+ + F +P++LEFEK
Sbjct: 771 PPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLEFEK 830
Query: 714 VYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D +
Sbjct: 831 MFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFNDETV 886
Query: 774 P-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA----------------- 815
G ++ + T DL N + + L + DD +K
Sbjct: 887 SEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQELSC 946
Query: 816 -------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVLENN 865
H+ + R+ R P VGDRV YV+ K YE +EDP +V+E
Sbjct: 947 YKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVVEAK 1005
Query: 866 IPIDTHYYLENQISKPLLRIFEPIL 890
+ I+ Y E Q+ K + P+
Sbjct: 1006 LSINAEKYYE-QVVKAVTNTLMPVF 1029
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 147/359 (40%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RARGWCRGPFP-------DELHFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG S+C V G + YFY C + D + + I + VP+ F
Sbjct: 130 ATEEGVSICVNVFGQKAYFY--CERTQSEDLKNIVYDIAD----------TVPEPRSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMVE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W V + A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDKKIPSFGWC-VARRYSVRAAGHVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVSHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDTKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|9625965|ref|NP_040211.1| DNA polymerase [Saimiriine herpesvirus 2]
gi|118886|sp|P24907.1|DPOL_SHV21 RecName: Full=DNA polymerase
gi|67033|pir||DJBEM2 DNA-directed DNA polymerase (EC 2.7.7.7) - saimiriine herpesvirus 1
(strain 11)
gi|60330|emb|CAA45632.1| DNA polymerase [Saimiriine herpesvirus 2]
gi|331057|gb|AAA46165.1| DNA polymerase [Saimiriine herpesvirus 2]
Length = 1009
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 175/543 (32%), Positives = 276/543 (50%), Gaps = 60/543 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L E R ++ +YC+ D+ L +LL M E+A++ +P
Sbjct: 457 KKEDVSYKDIMPLFMSGPEGRAKIGLYCVIDSVLVMKLLKFFMIHVEISEIAKLAKIPTR 516
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A+ +N ++P ++ ++GATV+ GFY + +D
Sbjct: 517 RVLTDGQQIRVFSCLLAAARAENYILPVSNDVNADG--FQGATVINPIPGFYNNAVLVVD 574
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETF---------VKSNLQK 570
FASLYPSI+ A+NLCYSTL+ P A N P K+ ETF VK ++Q
Sbjct: 575 FASLYPSIIQAHNLCYSTLI-PHHALH-NYPHL---KSSDYETFMLSSGPIHFVKKHIQA 629
Query: 571 GILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPC 630
+L +L L+ RK + L E +D K +LD +QLA+K++ N+VYGFTG G LPC
Sbjct: 630 SLLSRLLTVWLSKRKAIRQKLAECEDLDTKTILDKQQLAIKVTCNAVYGFTGVASGLLPC 689
Query: 631 IEISSSVTSYGRQMIEHTKKLVE--------DKFTTVGGYEHNAE--VIYGDTDSVMVQF 680
I I+ +VT GR M+E +K +E + + +E +A+ VIYGDTDS+ V+
Sbjct: 690 ISIAETVTLQGRTMLEKSKIFIEAMTPDTLQEIVPHIVKHEPDAKFRVIYGDTDSLFVEC 749
Query: 681 GVPTVEAAMKLGREAADYIS-GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK 739
+V+ +K G A + S F PIKLE EK + LL++KKRY G+ DK
Sbjct: 750 VGYSVDTVVKFGDFLAAFTSEKLFNAPIKLESEKTFQCLLLLAKKRYIGILSN-----DK 804
Query: 740 MDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISD------------- 786
+ KG++ VR+ C V+N ++ L+ IL D ++ A Q + + D
Sbjct: 805 LLMKGVDLVRKTACKFVQNTSSKILNLILKDPEVKAAAQLLSTKDPDYAFREGLPDGFLK 864
Query: 787 -----------LLMNRMDLSLLVITKGLTKTGDDYEVK-AAHVELAERMRKRDAATAPNV 834
L ++ + L + L++ Y+ + H+ + +++ R P V
Sbjct: 865 VIDILNESHKNLRTGQVPVEELTFSTELSRPISSYKTENLPHLTVYKKIITRHEE-PPQV 923
Query: 835 GDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNAS 894
DR+PYV + + +EDP Y ++NNIPI Y + I + I + + K++S
Sbjct: 924 HDRIPYVFVGKTTSCIS-NMAEDPTYTVQNNIPIAVDLYFDKLIHG-VANIIQCLFKDSS 981
Query: 895 KEL 897
K +
Sbjct: 982 KTV 984
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 150/325 (46%), Gaps = 41/325 (12%)
Query: 89 QSIMFQQLDIDYVIGDSNR----------ELLPLSSGSAAIIRIFGVTREGHSVCCKVHG 138
QSI F DI +R +++P + ++++ G T EG SVC V G
Sbjct: 86 QSITFHIYDIVETTYSEDRCNDIPFKFQTDIIP----NGTVLKLLGRTLEGASVCVNVFG 141
Query: 139 FEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQK 198
YFY+ P+G +I++ +++A P E V+K+ + Y ++
Sbjct: 142 QRNYFYVKVPEG---GNITYL-------IKQALNEKFSPSCAYQTEAVKKKILSRYDPEE 191
Query: 199 SQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNW 258
F V + ++ ++ G ++ +E+NV RF+ID + W
Sbjct: 192 HDVFKVTVSSSLSVYKISDSLVSNGCEV----------FETNVDAIRRFVIDNDFSTFGW 241
Query: 259 IEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHF 318
R T + S+ +EFDC Y D+ + ++ P+ I+SFDIEC G KG F
Sbjct: 242 YTCKSACPRITNRD-SHTDIEFDCGYYDL---EFHADRTEWPPYNIMSFDIECIGEKG-F 296
Query: 319 P--EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDF 376
P + D +IQ++ + G +++L +C+ + +V F +E D+L +
Sbjct: 297 PCAKNEGDLIIQISCVFWHAGALDTTRNMLLSLGTCSAVENTEVYEFPSEIDMLHGFFSL 356
Query: 377 IREVDPDVMIGYNICKFDLPYLIEK 401
IR+ + +++ GYNI FDLPYLI++
Sbjct: 357 IRDFNVEIITGYNISNFDLPYLIDR 381
>gi|190886840|gb|ACE95404.1| DNA polymerase [Muromegalovirus WP15B]
Length = 1098
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 171/569 (30%), Positives = 273/569 (47%), Gaps = 91/569 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV----------------------------KQA 491
++ GQ I++ + LL + +++++PN+
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHEAAAAAIEEAAAGGEGDETSEGENSN 597
Query: 492 GSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DA 544
S Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D
Sbjct: 598 NSRTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDV 657
Query: 545 RKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLD 604
++ + +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D
Sbjct: 658 LRVEIGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMD 710
Query: 605 GRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTT 658
+QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ T
Sbjct: 711 KQQLALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRT 770
Query: 659 VGGYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKL 709
V G A ++IYGDTDSV F EA +K +G AA+ + F +P++L
Sbjct: 771 VLGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRL 830
Query: 710 EFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILV 769
EFEK++ ++I KKRY G + + KG++ VRR C VK +V++ LH +
Sbjct: 831 EFEKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFN 886
Query: 770 DRDIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA------------- 815
D + G ++ + T DL N + + L + DD +K
Sbjct: 887 DETVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQ 946
Query: 816 -----------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYV 861
H+ + R+ R P VGDRV YV+ K YE +EDP +V
Sbjct: 947 ELSCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHV 1005
Query: 862 LENNIPIDTHYYLENQISKPLLRIFEPIL 890
+E + I+ Y E Q+ K + P+
Sbjct: 1006 VEAKLSINAEKYYE-QVVKAVTNTLMPVF 1033
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 149/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|195430028|ref|XP_002063059.1| GK21718 [Drosophila willistoni]
gi|194159144|gb|EDW74045.1| GK21718 [Drosophila willistoni]
Length = 2028
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 191/599 (31%), Positives = 285/599 (47%), Gaps = 53/599 (8%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGSEQGTYEGATVLEA 506
EMA++ G+ +LSRG +V S +LR AK KNLV P+V+Q + A ++E
Sbjct: 1428 EMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQQRAHMRAPEYLALIMEP 1487
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---------TPED--------ARKLN- 548
++ FY P+ LDF SLYPS+++ YN C+ST + TP + +R+L
Sbjct: 1488 QSRFYADPVIVLDFQSLYPSMIIGYNYCFSTCLGRVEHLGHSTPFEFGASQLRVSRQLLQ 1547
Query: 549 --LPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLDG 605
L V +P G FVK +++GILP +L E+L R+ K +K KD + +L
Sbjct: 1548 QLLDHNLVTISPCGVVFVKREVREGILPRMLSEILDTRQMVKQSMKFYKDSSALQRILHS 1607
Query: 606 RQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEH 664
RQL LK+ AN YG+T A G++P +E+ SV S GR+ +E K+VE E
Sbjct: 1608 RQLGLKLMANVTYGYTAANFSGRMPAVEVGDSVVSKGRETLERAIKMVE------SNEEW 1661
Query: 665 NAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKK 724
V+YGDTDS+ VQ A ++G E A ++ +P+KL+ EKVY P +L +KK
Sbjct: 1662 KVRVVYGDTDSMFVQVPGRNRAEAFRIGEEIAQAVTDINPQPVKLKLEKVYQPCILQTKK 1721
Query: 725 RYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKST 783
RY G + + ++ + + + KGIETVRRD C V ++ + L + D+ QYV
Sbjct: 1722 RYVGYMYESADQTEPVYEAKGIETVRRDGCPAVAKMLEKVLRLLFETPDVSRIKQYVCRQ 1781
Query: 784 ISDLLMNRMDLSLLVITK---GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPY 840
+ LL + +L L+ K GL V A +EL + +RD P G+RVPY
Sbjct: 1782 FTKLLSGKANLQDLIFAKEFRGLNGYKPTACVPA--LELTRKWMQRDPRRIPRRGERVPY 1839
Query: 841 VIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI-------LKN 892
+II G P VL N I+ YY+ I PL R I
Sbjct: 1840 IIINGPPGVPLIRLVRSPHEVLANEGHKINAIYYITKAIIPPLNRCLLLIGVDCHDWFAQ 1899
Query: 893 ASKELL--SGDHTRSISISTPSNSGIMKFAKRQ----LSC-IGCKALISNGTLCSHCKGR 945
++LL T + + T G+ K Q +C I C G +C C +
Sbjct: 1900 LPRKLLLMPAMSTGNQLVPTAPAGGVGKSTISQYFSTTNCIIDCGGQTKRG-ICPTCLKQ 1958
Query: 946 EAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAE 1004
++ LE + CQ C G L ++ C S DCP+ Y + ++D+ +
Sbjct: 1959 PQRCLATLHDKMARLERSYHLTQQICQACCGRLG-NLQCKSLDCPVLYVLEVKRQDLQQ 2016
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 25/163 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------- 170
I+RIFG G C +HG PYFYI P D F + G ++ A
Sbjct: 51 IVRIFGGNSLGQKTCMHIHGVFPYFYI-------PYDKRDFESLERGILQIAMSLDKAIN 103
Query: 171 ---NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
+ S + Q V I++V+ Y +++ Q +LKI + P V +L G L
Sbjct: 104 ISLGQGSSMAQHVFKIQLVKGIPFYGYHRREHQ-YLKIFMFNPRFVRRAANLLQSGAILG 162
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP--VGKYRK 268
K+F +ES+V + L+FMID N+ G +++ +P V K+R+
Sbjct: 163 ----KNFCPHESHVPYILQFMIDYNLYGMSYVHIPLEVVKFRR 201
>gi|44491719|gb|AAS47472.1| DNA polymerase [Murid herpesvirus 4]
Length = 1097
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 273/568 (48%), Gaps = 90/568 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV---------------------------KQAG 492
++ GQ I++ + LL + +++++PN+
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHEAAAAIEEAAAGGEGDETSEGENSNN 597
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DAR 545
S Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D
Sbjct: 598 SRTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVL 657
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDG 605
++ + +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D
Sbjct: 658 RVEIGDQC-------HRFVRENVHRSLLVELLVRWLTQRKLVREAMKQCTNEMQRMIMDK 710
Query: 606 RQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTV 659
+QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV
Sbjct: 711 QQLALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTV 770
Query: 660 GGYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLE 710
G A ++IYGDTDSV F EA +K +G AA+ + F +P++LE
Sbjct: 771 LGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLE 830
Query: 711 FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
FEK++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D
Sbjct: 831 FEKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFND 886
Query: 771 RDIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA-------------- 815
+ G ++ + T DL N + + L + DD +K
Sbjct: 887 ETVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQE 946
Query: 816 ----------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVL 862
H+ + R+ R P VGDRV YV+ K YE +EDP +V+
Sbjct: 947 LSCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVV 1005
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPIL 890
E + I+ Y E Q+ K + P+
Sbjct: 1006 EAKLSINAEKYYE-QVVKAVTNTLMPVF 1032
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 149/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|58264096|ref|XP_569204.1| zeta DNA polymerase [Cryptococcus neoformans var. neoformans JEC21]
gi|57223854|gb|AAW41897.1| zeta DNA polymerase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1940
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 181/628 (28%), Positives = 306/628 (48%), Gaps = 55/628 (8%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R+ Y + + +LD+ I E ARV GV + +L+RG KV S + R AK +
Sbjct: 1299 RVLKYFFQRTVMCMEILDQAEIITKTAEFARVFGVDFASVLTRGSQYKVESFIFRIAKPE 1358
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
+ V+ P+ +Q G + + + E + +Y P+ LDF SLYPSIM+AYN+CYST +
Sbjct: 1359 SFVLVSPSKQQVGLQNAPFAVPLIAEPESKYYTHPVIVLDFQSLYPSIMIAYNICYSTCL 1418
Query: 540 TPEDARK----------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
+ K L L + + TP+G FVK ++K +L ++L E+L
Sbjct: 1419 GRVEMFKGTNKFGFTNLKVTEGLLELLKDYLTVTPNGMIFVKPAIRKSLLAKMLGEILDT 1478
Query: 584 RKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K +K A+ D A+ + RQL LK+ AN YG+T AT G++PCIEI+ S+ G
Sbjct: 1479 RVMIKHAMKGARGDKSLTAMHNARQLGLKLMANVTYGYTSATYSGRMPCIEIADSIVQTG 1538
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E ++L+ + + +A V+YGDTDS+ V + E A K+G + A+ ++
Sbjct: 1539 RETLEKAQELIHSRV------DWDARVVYGDTDSLFVALPGRSKEQAFKIGYDIANAVTA 1592
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLV 760
KP+KL+FEKVY +L++KKRY G + +P+ + D KGIET+RRD + +
Sbjct: 1593 LNPKPVKLKFEKVYMGSVLMAKKRYVGFKYEHPDDTEPSFDAKGIETIRRDGFPAQQKME 1652
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
CL + +D+ ++ + +L + + +I K + T + + +
Sbjct: 1653 EVCLKLLFRTQDLSKVKEFCLKEWTKILQGHVSMQDFIIAKEVRLGTYSEKGIPPPGAAV 1712
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
A R +D P +RVPY +I A G + +R+ P +L + ++ ID YY+ N +
Sbjct: 1713 AYRRILKDPRDEPQYAERVPY-LISNADGRRLIDRARMPEELLSSRSLSIDAEYYIRNLL 1771
Query: 879 SKPLLRIF-------EPILKNASKELLSGDHTRSISISTPSNSGIMKFAK---------- 921
PL RIF E + K G + ++ T +G K +
Sbjct: 1772 IPPLSRIFNLVGADVEEWYDSMPKTKRLGKYDKAGGKMTNRGNGKGKQGEAKGRGSRIDS 1831
Query: 922 --RQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQV---QELEVLFGRLWTQCQECQG 976
R C+ C + S+ LC C+ + +S++ Q+ ++ ++ C
Sbjct: 1832 HFRSSHCVVC-GIESSDVLCHPCRLDPSTTSHALLSRLHIAQDKLIVLQKICASCSSVPP 1890
Query: 977 SLHQDVLCTSRDCPIFYRRKKAQKDMAE 1004
+ + +LC S DCP + R A++++ +
Sbjct: 1891 A--EKILCDSIDCPNTFARVAAEREVED 1916
>gi|405118606|gb|AFR93380.1| atrophin-1 family protein [Cryptococcus neoformans var. grubii H99]
Length = 1997
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 181/628 (28%), Positives = 308/628 (49%), Gaps = 55/628 (8%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
R+ Y + + +LD+ I E ARV GV + +L+RG KV S + R AK +
Sbjct: 1356 RVLKYFFQRTVMCMEILDQAEIITKTAEFARVFGVDFASVLTRGSQYKVESFIFRIAKPE 1415
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
+ V+ P+ +Q G + + + E + +Y P+ LDF SLYPSIM+AYN+CYST +
Sbjct: 1416 SFVLVSPSKQQVGLQNAPFAVPLIAEPESKYYTHPVIVLDFQSLYPSIMIAYNICYSTCL 1475
Query: 540 TPEDARK----------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
+ K L L + + TP+G FVK ++K +L ++L E+L
Sbjct: 1476 GRVEMFKGTNKFGFTNLKVADGLLELLKDYLTVTPNGMIFVKPAIRKSLLAKMLGEILDT 1535
Query: 584 RKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K +K +D A+ + RQL LK+ AN YG+T AT G++PCIEI+ S+ G
Sbjct: 1536 RVMIKHAMKGVRDNKSLTAMHNARQLGLKLMANVTYGYTSATYSGRMPCIEIADSIVQTG 1595
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E ++L+ + + +A V+YGDTDS+ V + E A K+G + AD ++
Sbjct: 1596 RETLEKAQELIHSRV------DWDARVVYGDTDSLFVALPGRSKEQAFKIGYDIADAVTA 1649
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLV 760
KP+KL+FEKVY +L++KKRY G + +P++ + D KGIET+RRD + +
Sbjct: 1650 LNPKPVKLKFEKVYMGSVLMAKKRYVGFKYEHPDETEPSFDAKGIETIRRDGFPAQQKME 1709
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
CL + +D+ ++ + +L + + +I K + T + V +
Sbjct: 1710 EVCLKLLFRTQDLSKVKEFCLKEWTKILQGHVSIQDFIIAKEVRLGTYSEKGVPPPGAAV 1769
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
A R +D P +RVPY +I A G + +R+ P +L + ++ ID YY+ N +
Sbjct: 1770 AYRRILKDPRDEPQYAERVPY-LISNADGRRLIDRARMPEELLSSRSLGIDAEYYIRNLL 1828
Query: 879 SKPLLRIFEPILKNASKELLSGDHTR--------SISISTPSNS----GIMKFAKRQLS- 925
PL RIF + + + S T+ + +S N G K + ++
Sbjct: 1829 IPPLSRIFNLVGADVEEWYNSMPKTKRLGKYDKAGVKMSNRGNGKGKQGRTKGSGSRIDS 1888
Query: 926 ------CIGCKALISNGTLCSHCKGREAELYCKTVSQV---QELEVLFGRLWTQCQECQG 976
C+ C + S+ LC C+ + +S++ Q+ ++ R+ C
Sbjct: 1889 HFKSSHCVVC-GIESSDVLCHSCRLEPSTTSHALLSRLHIAQDKLIVLQRICASCSLMPP 1947
Query: 977 SLHQDVLCTSRDCPIFYRRKKAQKDMAE 1004
+ + ++C S DCP + R A++++ +
Sbjct: 1948 A--EKIMCDSIDCPNTFARVAAEREVED 1973
>gi|336463563|gb|EGO51803.1| hypothetical protein NEUTE1DRAFT_125454 [Neurospora tetrasperma FGSC
2508]
Length = 1928
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 256/495 (51%), Gaps = 36/495 (7%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L +L+K I E AR+ GV + SRG KV S + R AK +N ++
Sbjct: 1144 YYLTRTRLDLEILEKNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1203
Query: 486 PNV--KQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1204 PSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIV 1263
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L + +N P+G + K +++K +L ++L E+L R
Sbjct: 1264 SWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMV 1323
Query: 588 KADLKEAKDPLEKAV---LDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQ 643
K+ +K+ KD +KA+ L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+
Sbjct: 1324 KSGMKQDKD--DKAIQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRE 1381
Query: 644 MIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTF 703
+E + +V + +AEV+YGDTDS+ V T E A ++G+E AD ++
Sbjct: 1382 TLERAIAFIH----SVQKW--DAEVVYGDTDSLFVSLKGRTREQAFEIGQEIADAVTKLN 1435
Query: 704 IKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTE 762
+P+KL+FEKVY+P +L++KKRY G Y + + D KGIETVRRD + + +
Sbjct: 1436 PRPVKLKFEKVYHPCILLAKKRYVGYKYESRDQTVPVFDAKGIETVRRDGTPAEQRIEEK 1495
Query: 763 CLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVE 818
L + D+ Y + ++ + + + G T A
Sbjct: 1496 ALKILFETADLSQVKSYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGAL 1555
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQ 877
+A + K DA P G+RVPYV++ A G + +R +P +L+N + +D YY+
Sbjct: 1556 IATKKMKEDARAEPQYGERVPYVVMAGAPGMRLVDRCVEPEELLDNAHATLDADYYINKN 1615
Query: 878 ISKPLLRIFEPILKN 892
I PL RIF + N
Sbjct: 1616 IIPPLERIFNLVGAN 1630
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
+ +IR+FG T +G VC +HG PY Y+ + P+ H + ++ R+
Sbjct: 37 AAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDGNLEPNKD---HALAISYRKDPIRD 93
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLDGLGMK 232
P++V I + + I +Y F LKI + P +++ +L +G+ + +
Sbjct: 94 R--PKYVARITLT--KGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMS----R 145
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F YE+++ + L+FM D N+ G N+++ + +R
Sbjct: 146 KFQPYEAHLQYLLQFMADYNLYGCNYLDAAIATFR 180
Score = 44.7 bits (104), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L + ++V E + + CQ C G +L ++V C S+DCP+FY R
Sbjct: 1761 LCRRCASDPPTLMVEMQAKVSRAEKSYVEIMKVCQSCAGFALSEEVPCDSKDCPVFYSRV 1820
Query: 997 KAQKDMAEAK 1006
K + + K
Sbjct: 1821 KQRTKVTAVK 1830
>gi|170055192|ref|XP_001863472.1| DNA polymerase zeta catalytic subunit [Culex quinquefasciatus]
gi|167875216|gb|EDS38599.1| DNA polymerase zeta catalytic subunit [Culex quinquefasciatus]
Length = 1959
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 194/607 (31%), Positives = 300/607 (49%), Gaps = 62/607 (10%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
LL +L I E+A++ G+ +LSRG +V S +LR AK +N V P+++Q
Sbjct: 1342 LLQQLDLIGRTAELAKLFGIQFYEVLSRGSQFRVESMMLRIAKPRNFVSVSPSIQQRAHM 1401
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPED----------- 543
+ +LE + FY P+ LDF SLYPSI++AYN C+ST + +
Sbjct: 1402 RSPEYLPLILEPNSRFYADPLIVLDFQSLYPSIIIAYNYCFSTCLGRVEHLGQSEPFEFG 1461
Query: 544 ARKLNLPP---------ECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEA 594
A +L L P V +P G FVKS++++GILP +L E+L R KA +K
Sbjct: 1462 ASQLRLSPRMLKVLVEKNLVTVSPCGAVFVKSSVREGILPRMLNEILTTRLMVKASMKLH 1521
Query: 595 K-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLV 652
K + + + VL RQL LK+ AN YG+T A G++PC+E+ SV S GR+ +E KLV
Sbjct: 1522 KENSILQRVLHSRQLGLKLIANVTYGYTAANFSGRMPCVEVGDSVVSKGRETLERAIKLV 1581
Query: 653 EDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFE 712
E T G A+V+YGDTDS+ V T + A K+G E A+ ++ P+KL+ E
Sbjct: 1582 ES--TERWG----AKVMYGDTDSMFVLCPGRTRQDAFKIGEEIAEAVTRDNPPPVKLKLE 1635
Query: 713 KVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTECLHKILVDR 771
KVY P +L +KK Y G + +P++ + + KGIETVRRD C +V ++ + L + +
Sbjct: 1636 KVYQPSILQTKKHYVGYMYESPDQEKPVYEAKGIETVRRDGCPVVSKMLEKVLRILFETQ 1695
Query: 772 DIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAA 829
D+ +Y + +L +R+++ + K + D Y+ A +EL R + D
Sbjct: 1696 DVSRVKEYTCRQFTKILEDRVNVQDYIFAKEF-RGQDGYKPGACVPALELTRRWKAVDPR 1754
Query: 830 TAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEP 888
P G+RVPYVII P +L + + I+++YY+ I PL R
Sbjct: 1755 REPRRGERVPYVIINGPPLVPLIRLVRSPDELLADPGLKINSNYYITKAIIPPLNRCLLL 1814
Query: 889 ILKNAS--------KELL--------SGDHTRSI---SISTPSNSGIMKFAKRQLSCIGC 929
I + + K L+ SG RS+ + P S I ++ SC+G
Sbjct: 1815 IGADVNQWYNDLPRKVLMLHNTGGSGSGKSKRSLLASELQLPKKSTISQYFS-TTSCVGD 1873
Query: 930 KALISNGTLCSHCKGREAELYCKTVSQVQELE--VLFG-RLWTQCQECQGSLHQDVLCTS 986
++ +C C GR + ++ LE V G ++ C CQ + + CTS
Sbjct: 1874 CGNQTHRGVCGECLGRPQRTVSYVMDKINRLERRVELGEKMCKSC--CQRTF--ETACTS 1929
Query: 987 RDCPIFY 993
DCP+ +
Sbjct: 1930 LDCPVLF 1936
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS---HFHQILEGRMREA----- 170
++R+FG T +G C +HG PY Y+ G D ++ +QI G + +A
Sbjct: 43 VVRLFGSTADGTHSCVHIHGVFPYLYVPY-DGASADSLAVDRLMYQI-AGSLDKAINVSL 100
Query: 171 -NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGL 229
N NS R I +V+ I Y +++ Q F KI + P + +L G+ +
Sbjct: 101 GNANSAATHVFR-IALVKGIPIYGYHRKEHQ-FFKIFLYNPYFIRKATNLLMNGVIMS-- 156
Query: 230 GMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK------TLSYCQLEFDCL 283
+ F TYE++V + L+F ID N+ G + + VP ++ +S + E D L
Sbjct: 157 --RVFQTYETHVPYILQFFIDYNLYGMSLMNVPTAAVQERGDGEGQLAKMSTSEYEVDIL 214
Query: 284 YSDIISR 290
DI++R
Sbjct: 215 AVDILNR 221
>gi|44491813|gb|AAS47485.1| DNA polymerase [Murid herpesvirus 4]
Length = 1094
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 170/565 (30%), Positives = 272/565 (48%), Gaps = 87/565 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV------------------------KQAGSEQ 495
++ GQ I++ + LL + +++++P + S
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPTMPSLGDEAAAAIEAAGEGDETSEGENSNNSRT 597
Query: 496 GTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DARKLN 548
Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D ++
Sbjct: 598 VGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVLRVE 657
Query: 549 LPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQL 608
+ +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D +QL
Sbjct: 658 IGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDKQQL 710
Query: 609 ALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTVGGY 662
ALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV G
Sbjct: 711 ALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTVLGL 770
Query: 663 EHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLEFEK 713
A ++IYGDTDSV F EA +K +G AA+ + F +P++LEFEK
Sbjct: 771 PPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLEFEK 830
Query: 714 VYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D +
Sbjct: 831 MFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFNDETV 886
Query: 774 P-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA----------------- 815
G ++ + T DL N + + L + DD +K
Sbjct: 887 SEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQELSC 946
Query: 816 -------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVLENN 865
H+ + R+ R P VGDRV YV+ K YE +EDP +V+E
Sbjct: 947 YKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVVEAK 1005
Query: 866 IPIDTHYYLENQISKPLLRIFEPIL 890
+ I+ Y E Q+ K + P+
Sbjct: 1006 LSINAEKYYE-QVVKAVTNTLMPVF 1029
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 147/359 (40%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RARGWCRGPFP-------DELHFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG S+C V G + YFY C + D + + I + VP+ F
Sbjct: 130 ATEEGVSICVNVFGQKAYFY--CERTQSEDLKNIVYDIAD----------TVPEPRSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMVE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W V + A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDKKIPSFGWC-VARRYSVRAAGHVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVSHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDTKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|44491805|gb|AAS47481.1| DNA polymerase [Murid herpesvirus 4]
Length = 1097
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 170/568 (29%), Positives = 274/568 (48%), Gaps = 90/568 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV---------------------------KQAG 492
++ GQ I++ + LL + +++++PN+
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHEAAAAIEEAAAGGEGDETSEGENSNN 597
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DAR 545
S Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D
Sbjct: 598 SRTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVL 657
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDG 605
++ + +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D
Sbjct: 658 RVEIGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDK 710
Query: 606 RQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTV 659
+QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV
Sbjct: 711 QQLALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTV 770
Query: 660 GGYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLE 710
G A ++IYGDTDSV F EA +K +G AA+ + F +P++LE
Sbjct: 771 LGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLE 830
Query: 711 FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
FEK++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D
Sbjct: 831 FEKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFND 886
Query: 771 RDIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA-------------- 815
+ G ++ + T DL N + + L + +D +K
Sbjct: 887 ETVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLGRAREDVHLKKVPVPELTLSSVLSQE 946
Query: 816 ----------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVL 862
H+ + +R+ R P VGDRV YV+ K YE +EDP +V+
Sbjct: 947 LSCYKQKNLPHLAVIQRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVV 1005
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPIL 890
E + I+ Y E Q+ K + P+
Sbjct: 1006 EAKLSINAEKYYE-QVVKAVTNTLMPVF 1032
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 149/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P S +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPSGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|226294625|gb|EEH50045.1| DNA polymerase zeta catalytic subunit [Paracoccidioides brasiliensis
Pb18]
Length = 1628
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 272/545 (49%), Gaps = 44/545 (8%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGS 493
+++D I E AR+ GV + SRG KV S + R AK +NL++ P KQ G
Sbjct: 1021 KIIDSNELISRTSEQARILGVDFFSVFSRGSQFKVESLMFRIAKPENLILISPGRKQVGQ 1080
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE----------- 542
+ V+E ++ FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 1081 QNALECLPLVMEPQSDFYTSPVLVLDFQSLYPSIMIAYNYCYSTCLGRVVEWRGQNKLGF 1140
Query: 543 -DARK----LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDP 597
D R+ L L + +N +P+G +VK ++K +L ++L E+L R K +K KD
Sbjct: 1141 IDFRRPAGLLELFKDQINISPNGMIYVKQEIRKSLLAKMLIEILETRVMVKGGMKAWKDD 1200
Query: 598 LE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDK 655
+ +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +E ++
Sbjct: 1201 KSLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETLEKAIAMIH-- 1258
Query: 656 FTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
+V + NAEV+YGDTDSV V T + A +G E A I+ + +PIKL+FEKVY
Sbjct: 1259 --SVERW--NAEVVYGDTDSVFVCLKGRTKDEAFDIGEEIAKTITNSNPRPIKLKFEKVY 1314
Query: 716 YPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP 774
+P +L++KKRY G + N +K + D KGIETVRRD + + + L + D+
Sbjct: 1315 HPCVLLAKKRYVGYKYENRSQKEPEFDAKGIETVRRDGTPAEQKIEEKVLRILFETADLS 1374
Query: 775 GAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAPN 833
Y + + ++ +++ + K + T D + L+ + D T
Sbjct: 1375 RVKSYFQKQCTKIMKSKVSIQDFCFAKEVRLGTYSDKGMPPPGALLSSKRMLEDPRTEAQ 1434
Query: 834 VGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYYLENQISKPLLRIFEPILKN 892
G+RVPYV+I GA+ +R P +L ++ + +D YY+ I PL RIF + N
Sbjct: 1435 YGERVPYVVISGVPGARLIDRCVPPEVLLHDSQLELDAEYYISKNIIPPLERIFNLVGAN 1494
Query: 893 ASK---ELLSGDHTRSI----SISTPSNSGIMKFAK------RQLSCIGCKALISNG--T 937
+ E+ R + ++ S G+ K + SC+ C+ + G
Sbjct: 1495 VRQWYDEVPKYQRVRRVESAEEYASASREGVFSTKKTLESYMKSSSCVVCREKLDEGEEQ 1554
Query: 938 LCSHC 942
+C+ C
Sbjct: 1555 ICNGC 1559
>gi|371783000|emb|CCE57225.1| M54 protein [Murid herpesvirus 1]
Length = 1097
Score = 245 bits (626), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 272/568 (47%), Gaps = 90/568 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV---------------------------KQAG 492
++ GQ I++ + LL + ++L++P +
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDLILPTMPSLGDEAAAAIEAAAAAGEGDETSEGENSNN 597
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DAR 545
S Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D
Sbjct: 598 SRTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVL 657
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDG 605
++ + +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D
Sbjct: 658 RVEIGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDK 710
Query: 606 RQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTV 659
+QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV
Sbjct: 711 QQLALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTV 770
Query: 660 GGYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLE 710
G A ++IYGDTDSV F EA +K +G AA+ + F +P++LE
Sbjct: 771 LGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLE 830
Query: 711 FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
FEK++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D
Sbjct: 831 FEKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFND 886
Query: 771 RDIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA-------------- 815
+ G ++ + T DL N + + L + DD +K
Sbjct: 887 ETVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQE 946
Query: 816 ----------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVL 862
H+ + R+ R P VGDRV YV+ K YE +EDP +V+
Sbjct: 947 LSCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVV 1005
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPIL 890
E + I+ Y E Q+ K + P+
Sbjct: 1006 EAKLSINAEKYYE-QVVKAVTNTLMPVF 1032
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 147/359 (40%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RARGWCRGPFP-------DELHFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG S+C V G + YFY C + D + + I + VP+ F
Sbjct: 130 ATEEGVSICVNVFGQKAYFY--CERTQSEDLKNIVYDIAD----------TVPEPRSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMVE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W V + A +S QLE DC +DI+ P E +
Sbjct: 229 VDPLARFLIDKKIPSFGWC-VARRYSVRAAGHVSRAQLEIDCDVADIL---PIEEQTNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVSHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDTKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|88604888|gb|ABD46764.1| REV3 [Neurospora crassa]
Length = 1926
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 253/493 (51%), Gaps = 32/493 (6%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L +L+K I E AR+ GV + SRG KV S + R AK +N ++
Sbjct: 1144 YYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1203
Query: 486 PNV--KQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1204 PSPSRKQVGAQNALECLPLVMEPQSAFYSSPLIVLDFQSLYPSVMIAYNYCYSTFLGRIV 1263
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L + +N P+G + K +++K +L ++L E+L R
Sbjct: 1264 SWRGTNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMV 1323
Query: 588 KADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+ +
Sbjct: 1324 KSGMKQDKDDRAIQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETL 1383
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E + +V + +AEV+YGDTDS+ V T E A ++G+E AD ++ +
Sbjct: 1384 ERAIAFIH----SVQKW--DAEVVYGDTDSLFVSLKGRTREQAFEIGQEIADAVTKLNPR 1437
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + + D KGIETVRRD + + + L
Sbjct: 1438 PVKLKFEKVYHPCILLAKKRYVGYKYESRDQTVPVFDAKGIETVRRDGTPAEQRIEEKAL 1497
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVELA 820
+ D+ Y + ++ + + + G T A +A
Sbjct: 1498 KILFETADLSQVKSYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGALIA 1557
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQIS 879
+ K DA P G+RVPYV++ A G + +R +P +L N + +D YY+ I
Sbjct: 1558 TKKMKEDARAEPQYGERVPYVVMAGAPGMRLVDRCVEPEELLNNAHATLDADYYINKNII 1617
Query: 880 KPLLRIFEPILKN 892
PL RIF + N
Sbjct: 1618 PPLERIFNLVGAN 1630
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
+ +IR+FG T +G VC +HG PY Y+ + P S H + ++ R+
Sbjct: 37 AAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDGNLEP---SKDHALAISYRKDPIRD 93
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLDGLGMK 232
P++V I + + I +Y F LKI + P +++ +L +G+ + +
Sbjct: 94 R--PKYVARISLT--KGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMS----R 145
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F YE+++ + L+FM D N+ G N+++ + +R
Sbjct: 146 KFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFR 180
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L ++V E + CQ C G +L ++V C S+DCP+FY R
Sbjct: 1759 LCHRCASDPPTLMVDMQAKVSRAEKSCVEIMKVCQSCAGFALSEEVPCDSKDCPVFYSRV 1818
Query: 997 KAQKDMAEAK 1006
K + + K
Sbjct: 1819 KQRTKVTTVK 1828
>gi|44491809|gb|AAS47483.1| DNA polymerase [Murid herpesvirus 4]
Length = 1094
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 272/565 (48%), Gaps = 87/565 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV------------------------KQAGSEQ 495
++ GQ I++ + LL + ++L++P + S
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDLILPTMPSLGDEAAAAIEAAGEGDETSEGENSNNSRT 597
Query: 496 GTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DARKLN 548
Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D ++
Sbjct: 598 VGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVLRVE 657
Query: 549 LPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQL 608
+ +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D +QL
Sbjct: 658 IGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDKQQL 710
Query: 609 ALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTVGGY 662
ALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV G
Sbjct: 711 ALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTVLGL 770
Query: 663 EHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLEFEK 713
A ++IYGDTDSV F EA +K +G AA+ + F +P++LEFEK
Sbjct: 771 PPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLEFEK 830
Query: 714 VYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D +
Sbjct: 831 MFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFNDETV 886
Query: 774 P-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA----------------- 815
G ++ + T DL N + + L + DD +K
Sbjct: 887 SEGTMKLSRMTFDDLKKNGIPGEFGPLVSRLCRARDDLHLKKVPVPELTLSSVLSQELSC 946
Query: 816 -------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVLENN 865
H+ + R+ R P VGDRV YV+ K YE +EDP +V+E
Sbjct: 947 YKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVVEAK 1005
Query: 866 IPIDTHYYLENQISKPLLRIFEPIL 890
+ I+ Y E Q+ K + P+
Sbjct: 1006 LSINAEKYYE-QVVKAVTNTLMPVF 1029
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 147/359 (40%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RARGWCRGPFP-------DELHFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG S+C V G + YFY C + D + + I + VP+ F
Sbjct: 130 ATEEGVSICVNVFGQKAYFY--CERTQSEDLKNIVYDIAD----------TVPEPRSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMVE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W V + A +S QLE DC +DI+ P E +
Sbjct: 229 VDPLARFLIDKKIPSFGWC-VARRYSVRAAGHVSRAQLEIDCDVADIL---PIEEQTNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVSHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDTKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|44491715|gb|AAS47470.1| DNA polymerase [Murid herpesvirus 4]
Length = 1097
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 170/568 (29%), Positives = 273/568 (48%), Gaps = 90/568 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV---------------------------KQAG 492
++ GQ I++ + LL + +++++PN+
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHEAAAAIEEAAAGGEGDETSEGENSNN 597
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DAR 545
S Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D
Sbjct: 598 SRTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVL 657
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDG 605
++ + +C FV+ N+ + +L E+L L RK + +K+ + +++ +++
Sbjct: 658 RVEIGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMNK 710
Query: 606 RQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTV 659
+QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV
Sbjct: 711 QQLALKLTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTV 770
Query: 660 GGYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLE 710
G A ++IYGDTDSV F EA +K +G AA+ + F +P++LE
Sbjct: 771 LGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLE 830
Query: 711 FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
FEK++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D
Sbjct: 831 FEKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFND 886
Query: 771 RDIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA-------------- 815
+ G ++ + T DL N + + L + DD +K
Sbjct: 887 ETVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQE 946
Query: 816 ----------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVL 862
H+ + R+ R P VGDRV YV+ K YE +EDP +V+
Sbjct: 947 LSCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVV 1005
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPIL 890
E + I+ Y E Q+ K + P+
Sbjct: 1006 EAKLSINAEKYYE-QVVKAVTNTLMPVF 1032
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 149/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|238881005|gb|EEQ44643.1| hypothetical protein CAWG_02917 [Candida albicans WO-1]
Length = 1630
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 188/595 (31%), Positives = 296/595 (49%), Gaps = 66/595 (11%)
Query: 448 VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSEQGTYEGATVLE 505
VE +R+ G+ + RG KV S L R K ++L++ P+ +Q + +LE
Sbjct: 1036 VEHSRLIGIEFNSNFYRGSQYKVESILARICKPESLLLNSPSKQQVHEMRPIECIPLILE 1095
Query: 506 ARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV--------TPEDA---RKLNLPPECV 554
++ FY+ P+ LDF SLYPSIM+AYN CYSTLV T + R L +P V
Sbjct: 1096 PKSNFYKSPLVVLDFQSLYPSIMIAYNYCYSTLVGKLHNYRPTKNNIGYLRNLKIPYGLV 1155
Query: 555 NK---------TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVL-D 604
N +P+G FVKS+++K +L ++LEE+L+ R + K +K K+ E L +
Sbjct: 1156 NLLQREDGFNISPNGFVFVKSHIRKSVLAKMLEEILSIRIKIKQVMKLFKEDAELTKLYN 1215
Query: 605 GRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYE 663
RQLALK+ AN YG+T AT G++P +I+ ++ S GR+++ + +L+E G Y
Sbjct: 1216 SRQLALKLIANVTYGYTSATFSGRMPNSDIADAIVSTGREILNKSIELIE-----AGNY- 1269
Query: 664 HNAEVIYGDTDSVMVQF-GVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLIS 722
A+V+YGDTDS+ V F G P EA KLG++ A I+ F P+KL+FEKVY+P +L++
Sbjct: 1270 -GAKVVYGDTDSLFVYFPGKPKTEA-FKLGKQIAKTITNYFPDPVKLKFEKVYHPCVLLA 1327
Query: 723 KKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVK 781
KKRY G Y +K K D KGIETVRRD + + L + +++ QY
Sbjct: 1328 KKRYVGFSYEYEDQKTPKFDAKGIETVRRDGIPAQSKMTEKTLRILFETKNLSKVKQYTI 1387
Query: 782 STISDLLMNRMDLSLLVITKGL---TKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRV 838
++ N++ + K + T + Y A + A+ M + D P +RV
Sbjct: 1388 DQFYKIIFNKVPIRDFCFAKEVRYGTYKNEKYLPPGAII--AKNMAEEDPRKEPQYRERV 1445
Query: 839 PYVIIKAAKGAKAYER---SEDPIYVLENNIPI--DTHYYLENQISKPLLRIFEPILKNA 893
PYV+I+ + + +R ED I E N P+ D YY+ + PL RIF I +
Sbjct: 1446 PYVVIRDSSKPRIKDRCVTPEDFIKSYETNSPVSLDYEYYITRVLIPPLERIFNLIGID- 1504
Query: 894 SKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGC-KALISNGTLCSHCKGREAELYCK 952
++G + + + S+ + C+ C L + +CS C E E+
Sbjct: 1505 ----ITGWYRQMPIVMRGSHVAYAE------GCLVCGNRLDDSANICSKCLANEQEVIAD 1554
Query: 953 TVSQVQELEVLFGRLWTQCQECQGSLHQDVL----------CTSRDCPIFYRRKK 997
+S ++ E + CQ+C + + C + DC ++Y + K
Sbjct: 1555 IISTSRDTEKKLVEVERVCQKCVDNNTSSSMGRFIDQCTDDCVNGDCIVYYNKFK 1609
>gi|44491711|gb|AAS47468.1| DNA polymerase [Murid herpesvirus 4]
Length = 1097
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 170/568 (29%), Positives = 272/568 (47%), Gaps = 90/568 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV---------------------------KQAG 492
++ GQ I++ + LL + +++++PN+
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHEAAAAIEEAAAGGEGDETSEGENSNN 597
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DAR 545
S Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D
Sbjct: 598 SRTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVL 657
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDG 605
++ + +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D
Sbjct: 658 RVEIGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDK 710
Query: 606 RQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTV 659
+QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ +ED+ TV
Sbjct: 711 QQLALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLAAAGHIEDRCNRPDFLRTV 770
Query: 660 GGYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLE 710
G A ++IYGDTDSV F EA +K +G AA+ + F +P++LE
Sbjct: 771 LGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLE 830
Query: 711 FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
FEK++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D
Sbjct: 831 FEKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFND 886
Query: 771 RDIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA-------------- 815
+ G ++ + T DL N + + L + DD +K
Sbjct: 887 ETVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQE 946
Query: 816 ----------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVL 862
H+ + R+ R P VGDRV YV+ K YE +EDP +V+
Sbjct: 947 LSCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVV 1005
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPIL 890
E + I+ Y E Q+ K + P+
Sbjct: 1006 EAKLSINAEKYYE-QVVKAVTNTLMPVF 1032
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 149/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|410082397|ref|XP_003958777.1| hypothetical protein KAFR_0H02330 [Kazachstania africana CBS 2517]
gi|372465366|emb|CCF59642.1| hypothetical protein KAFR_0H02330 [Kazachstania africana CBS 2517]
Length = 1499
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 210/706 (29%), Positives = 330/706 (46%), Gaps = 79/706 (11%)
Query: 365 TERDVLLAWRDFIREVDPDVM------IGYNICKFDLPYLIEKEDVHHSIISDLQNGNAE 418
T R +L WR I D + I YN+ LP+ + +++ N
Sbjct: 815 TGRHILNIWR--ILSSDLQLTQYTVENIAYNLLHKRLPHFSNRN------LTEFWNNKRS 866
Query: 419 TRRRLAV--YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLR 476
+ V Y L + LL FI + AR+ GV + RG +V S L+R
Sbjct: 867 FSKIKTVLQYWLTRVRINFELLKAQDFIARTMVQARLIGVDFQSVYYRGSQYRVESFLVR 926
Query: 477 KAKQKNLVIPN-VKQAGSEQGTYEGA-TVLEARAGFYEKPIATLDFASLYPSIMMAYNLC 534
K ++ ++ + KQ EQ E ++E + FY+ P+ LDF SLYPSIM+AYN C
Sbjct: 927 VCKGESFILVSPSKQKVREQKPLECVPLIMEPESAFYKSPMLVLDFQSLYPSIMIAYNYC 986
Query: 535 YSTLV-----------------TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEIL 577
YSTL+ P L L + V P+G FV S+++K L ++L
Sbjct: 987 YSTLLGRVREMQLGDNEVGVSSVPIKENTLRLLKDDVTIAPNGLVFVNSSIRKSTLAKML 1046
Query: 578 EELLAAR---KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEI 633
++L R K+ ++L D L + +L+ Q ALK+ AN YG+T A+ G++PC ++
Sbjct: 1047 ADVLDIRVMVKKTISELGSENDTL-RNLLNNEQEALKLLANVTYGYTSASFSGRMPCSDL 1105
Query: 634 SSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGR 693
+ S+ GR+ +E +L+E A+V+YGDTDS+ + T E A +G
Sbjct: 1106 ADSIVQTGRETLERAIELIE------SDENWGAKVVYGDTDSLFIYLPGKTREEAFTIGN 1159
Query: 694 EAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDN 752
E + +S + +P+ L+FEKVY+P +L+SKKRY G Y + ++ K D+KGIETVRRD
Sbjct: 1160 EMSIAVSASNPEPLFLKFEKVYHPCILVSKKRYVGYSYEKSTQQEPKFDSKGIETVRRDG 1219
Query: 753 CLLVKNLVTECLHKILVD-RDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE 811
+ +V + L KIL D +DI +YV+ + ++ + K + K G Y+
Sbjct: 1220 HPAQQKIVEKSL-KILFDTKDITKVKEYVQDQFFKIHSGKVSIQDFCFAKAV-KLG-TYK 1276
Query: 812 VKAA---HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIP 867
A+ +A + K+D P +RVPY+I+K + G ERS P N N+
Sbjct: 1277 SAASLPPGAMVAMKQMKKDTRAEPQYKERVPYLIVKGSPGQVLRERSISPEEFFANPNLE 1336
Query: 868 IDTHYYLENQISKPLLRIFEPILKNASKELLS-GDHTRSISISTPSNSGIMKFAKRQLSC 926
+D YY++ + PL R+F I N + R +S++T N+ K + + C
Sbjct: 1337 LDATYYIDKTLVPPLSRLFNIIGINVADWAFDIPRMKRDLSVNT--NTKESKLGESSM-C 1393
Query: 927 IGCKALI---SNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQEC------QGS 977
I C + N TLC C+ + + + + L C+ C
Sbjct: 1394 INCGEEVVSSENKTLCGDCEMSAQKTTVGLLYDTLYRQNMMKNLNMVCRTCTYQYTKNAG 1453
Query: 978 LHQDVL---CTSRDCPIFYRRKKAQK----DMAEAKLQ----LDRW 1012
+ D++ C S DCPI+Y R K++K D+ K LD W
Sbjct: 1454 VEGDLIASKCDSYDCPIYYSRIKSKKYLMSDITRKKRSALDALDNW 1499
>gi|295663052|ref|XP_002792079.1| polymerase zeta subunit [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279254|gb|EEH34820.1| polymerase zeta subunit [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1675
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 273/545 (50%), Gaps = 44/545 (8%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGS 493
+++D I E AR+ GV + SRG KV S + R AK +NL++ P KQ G
Sbjct: 1071 KIIDSNELISRTSEQARILGVDFFSVFSRGSQFKVESLMFRIAKPENLILISPGRKQVGQ 1130
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE----------- 542
+ V+E ++ FY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 1131 QNALECLPLVMEPQSDFYTSPVLVLDFQSLYPSIMIAYNYCYSTCLGRVVEWRGQNKLGF 1190
Query: 543 -DARK----LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK-D 596
D R+ L L + +N +P+G +VK +++K +L ++L E+L R K +K K D
Sbjct: 1191 IDFRRPAGLLELFKDQINISPNGMIYVKQDIRKSLLAKMLIEILETRVMVKGGMKAWKAD 1250
Query: 597 PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDK 655
+ +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +E ++
Sbjct: 1251 KHLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETLEKAIAMIH-- 1308
Query: 656 FTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
+V + NAEV+YGDTDSV V T + A +G E A I+ + +PIKL+FEKVY
Sbjct: 1309 --SVERW--NAEVVYGDTDSVFVCLKGRTKDEAFDIGEEIAKTITNSNPRPIKLKFEKVY 1364
Query: 716 YPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP 774
+P +L++KKRY G + N +K + D KGIETVRRD + + + L + D+
Sbjct: 1365 HPCVLLAKKRYVGYKYENRSQKEPEFDAKGIETVRRDGTPAEQKIEEKVLRILFETADLS 1424
Query: 775 GAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERMRKRDAATAPN 833
Y + + ++ ++ + K + T D + ++ + D T
Sbjct: 1425 RVKSYFQKQCTKIMKGKVSIQDFCFAKEVRLGTYSDKGMPPPGALISSKRMLEDPRTEAQ 1484
Query: 834 VGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYYLENQISKPLLRIFEPILKN 892
G+RVPYV+I A GA+ +R P +L ++ + +D YY+ + PL RIF + N
Sbjct: 1485 YGERVPYVVISGAPGARLIDRCVPPEVLLHDSQLELDAEYYISKNLIPPLERIFNLVGAN 1544
Query: 893 ASK---ELLSGDHTRSISI----STPSNSGIMKFAK------RQLSCIGCKALISNG--T 937
+ E+ R + ++ S G+ K + SC+ C+ + G
Sbjct: 1545 VRQWYDEMPKYQRVRRVESAEENASASREGVFSAKKTLESYMKSSSCVVCREKLDEGEEQ 1604
Query: 938 LCSHC 942
+C+ C
Sbjct: 1605 ICNGC 1609
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 47/223 (21%)
Query: 110 LPLSSGSAA--------IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQ 161
LPLS G+A +IR+FG T G VC +HG PY YI + P +++ +
Sbjct: 25 LPLSDGTAPKDARPKVPVIRVFGATETGQKVCAHIHGAFPYLYIEYQGSLNPKEVNTAIR 84
Query: 162 ILEGRMREA-------NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVA 214
L + A N + +V HI +V K Y + FLKI + P +
Sbjct: 85 TLHMSVDHALAVSYRRNAYERKISYVAHITLV-KGVPFYGYHVGYRFFLKIYLFNPMHMN 143
Query: 215 SCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIE-------VPVGKYR 267
+L +G + + YES++ + ++M D N+ G +++ P+ Y
Sbjct: 144 RLADLLRQG----AVMKRVLQPYESHLQYLAQWMCDYNLYGCAYLKSSKVMFRAPIPIYS 199
Query: 268 K--------------------TAKTLSYCQLEFDCLYSDIISR 290
+ T S+C LE D DI++R
Sbjct: 200 ENLTHRWHDRSIPPGSVSDISTLPRQSHCDLEVDIHVQDIVNR 242
>gi|254569028|ref|XP_002491624.1| Catalytic subunit of DNA polymerase zeta, which is involved in DNA
repair and translesion synthesis [Komagataella pastoris
GS115]
gi|238031421|emb|CAY69344.1| Catalytic subunit of DNA polymerase zeta, which is involved in DNA
repair and translesion synthesis [Komagataella pastoris
GS115]
gi|328351871|emb|CCA38270.1| DNA polymerase zeta subunit [Komagataella pastoris CBS 7435]
Length = 1495
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 193/706 (27%), Positives = 317/706 (44%), Gaps = 92/706 (13%)
Query: 365 TERDVLLAWRDFIREVDPDVM----IGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETR 420
T R VL WR E+ + Y+I +P+ ++ ++S+ +
Sbjct: 800 TGRHVLNLWRALTHEITLTNYTLENLVYHILHLRIPHY------NYGVLSEWFESDKPQY 853
Query: 421 RRLAV-YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAK 479
+ L + Y + L +++ ++ + E A++ G+ +LSRG KV S L+R K
Sbjct: 854 KSLVLNYFTQRVALEMQIITQIQIVSKVTEEAKLIGIDFYSVLSRGSQFKVESLLVRLTK 913
Query: 480 QKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST 537
Q+NL++ P+ K + ++E A FY+ PI LDF SLYPS+++AYN CY+T
Sbjct: 914 QENLLMISPSKKDVFKQDPLTYVPLIMEPEAAFYKSPIVVLDFQSLYPSLVIAYNYCYTT 973
Query: 538 LV---TPEDARKLNLPPECVNK---------------TPSGETFVKSNLQKGILPEILEE 579
+ DA K + NK +P+G FVKSN+++ ++ ++L +
Sbjct: 974 CLGRMQGYDAFKEQMIGVTKNKLPAGILEVLKHHITLSPNGLMFVKSNVRRSVIGKMLID 1033
Query: 580 LLAARKRAKADLKE-AKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSV 637
LL R K+ +K+ DP + RQLALK+ AN YG+ AT G++PC +I+ ++
Sbjct: 1034 LLDTRILVKSAIKKLGNDPRILQTYNSRQLALKLIANVTYGYASATFSGRMPCADIADAI 1093
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
S R+ + L+E A V+YGDTDS+ V + A +G E A
Sbjct: 1094 VSSARETLNRAISLIE------ANTNWGARVVYGDTDSLFVYLPGKSKADAFMIGEEMAA 1147
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLV 756
++ +P+KL+FEKVY+P L+SKKRY G + PE+ + K D KGIETVRRD
Sbjct: 1148 AVTSENPQPVKLKFEKVYHPSTLLSKKRYVGYSYERPEQTEPKFDAKGIETVRRDGIPAQ 1207
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKG--LTKTGDDYEVKA 814
+ +V + L + D+ QY ++ ++ +L N + L K L + Y
Sbjct: 1208 QKIVEKSLRILFDSSDLSQVKQYFQAQVTKILTNNVGLQDFCFAKEVRLGTYKEKYIPPG 1267
Query: 815 AHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN----IPIDT 870
A V A R D P +R+PY+++K + +R P L + +D
Sbjct: 1268 ALV--ASRKADEDPNAVPQYRERIPYLVVKGRTKERLKDRCLSPEEYLARKDTEFLELDA 1325
Query: 871 HYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQ------- 923
YY++ I PL RIF+ L G + RS P I + K+
Sbjct: 1326 QYYIDKVIIPPLERIFQ----------LMGVNVRSWFTEMPVIQRISPYIKQSNTSKPST 1375
Query: 924 -------LSCIGCKALISNGT---LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQE 973
L C+ C + G +C C+ E+ +++ E ++ C+
Sbjct: 1376 IHHFITVLRCLVCGTNLPRGNKSKICRQCQNSPLEVVTSLGAKIHNAEKKVQNIFNLCEF 1435
Query: 974 CQGSLHQDVL----------------CTSRDCPIFYRRKKAQKDMA 1003
C S H L C +++C ++Y+R KA+ +
Sbjct: 1436 C-SSGHALFLPNFQNFNSVKFLTASSCENQNCILYYKRLKAETKLT 1480
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 117 AAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMR------EA 170
A ++R+FG GH+ C +H PY I Q G DD+ + ++ ++R E
Sbjct: 30 APVLRVFGKLETGHTCCVHIHNVYPYLLI---QWEG-DDLENLRHEIDEKLRMSFGKQEF 85
Query: 171 N--RNSKVPQFVRHIEMVQKRSIMYYQQQ---------KSQP----------FLKIVVAL 209
N + +F ++ + + QQQ K P F+KI +
Sbjct: 86 NGLDGQEYQEFPETNSVISENPELIPQQQTFIADIYRVKGVPFYGFHVMHSAFVKICLLN 145
Query: 210 PTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
P V +L G ++ G ++ F ES++ + ++F+ D N+ +W+++ +R
Sbjct: 146 PKYVPKLSKLLSEG-KIFGSKIQPF---ESHIPYTMQFLTDYNLFPCDWLKIKQWYWR 199
>gi|123410205|ref|XP_001303643.1| DNA polymerase family B containing protein [Trichomonas vaginalis G3]
gi|121885038|gb|EAX90713.1| DNA polymerase family B containing protein [Trichomonas vaginalis G3]
Length = 1174
Score = 244 bits (624), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 197/796 (24%), Positives = 357/796 (44%), Gaps = 113/796 (14%)
Query: 302 FRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVM 361
++L ++ C+ R P P D + V TL +K+ I V ++G V
Sbjct: 382 LKVLFIEVGCSSRGKLLPNPAMDQI--VCACFTLMIDKE-IIEKVTFWVGPNLVIGEKVE 438
Query: 362 SFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK------EDVHHSIISDLQNG 415
F +ER++L+ ++I ++DPD+++G+NI + + Y+ E+ +D + + +N
Sbjct: 439 FFSSERELLVGVINYILKIDPDIIVGWNIERESVFYINERCKILGIKDFYAEVSRTGKNP 498
Query: 416 NA--ETR--------------------RRLAVYCLKDAYLPQRLLD-------------- 439
+A E R R + + D +L + D
Sbjct: 499 HAMDEVRYIEGRLTVNLWRVVRHQAALRSYTLASVSDHFLGTKFPDIKQSQISYWLHSAP 558
Query: 440 ---------------KLMFIFNYV----EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
+ N+V E++ + G + SRG ++ S L+R +K+
Sbjct: 559 FRFVSYCRKRATVIISICLAMNFVEYYCELSSIIGADFASTYSRGSQFQIESLLIRVSKR 618
Query: 481 KNLVIPNVK--QAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
+P+ + ++ V+E +GFY P+ +DF SLYPS ++AYNL Y+++
Sbjct: 619 LGFCLPSPTRFEVSQQRAPMALPLVMEPMSGFYSDPVLVIDFQSLYPSSIIAYNLDYTSI 678
Query: 539 V-TPEDAR--------KLNLPPECVNK---------TPSGETFVKSNLQKGILPEILEEL 580
V EDA + +P + + TP+ +V +++ G+LP +L+++
Sbjct: 679 VGRTEDANTGGRLGVYEHKVPTRVLEELLENGKIINTPNDVLYVTKDVRPGLLPAMLDQI 738
Query: 581 LAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTS 639
L R K LK+ K+ K++LD RQ+ALK+ A YG+T A G++PC+E+S S+
Sbjct: 739 LNLRAFIKQTLKKTKNAKMKSILDARQMALKVIAACTYGYTSAHFSGRMPCVELSDSIVE 798
Query: 640 YGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYI 699
R ++E T +E + + V+YGDTDS+ V + E + + + I
Sbjct: 799 CSRHVLEFTLNYIEKNYPELS-------VLYGDTDSLFVMMPPASTEKCFQFADKLCEEI 851
Query: 700 SGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKN 758
+ F PI+++ EK+Y L++KKRY GL Y T ++ D KG+E RRD+C
Sbjct: 852 TSIFPSPIRIKIEKIYRGCFLVNKKRYCGLVYETADQQVPTFDVKGLEMKRRDSCPFTAR 911
Query: 759 LVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVE 818
++TE + I+ +DI A K IS L N + + L + L + G ++
Sbjct: 912 VMTEVILSIIKTKDIKEAEVIFKQNISKLCHNIIPIHELFFAREL-RLGTYKALEPPGAF 970
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
+A R D P G R+ Y+++ ++ G++ ++ P LE N+ + T YY+E Q+
Sbjct: 971 VARRQMSVDPMMEPLYGQRLQYIVVSSSPGSRLVDKVVSPEEYLERNMRVCTKYYVEKQL 1030
Query: 879 SKPLLRIFEPI-------LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKA 931
L R+ E + +KN S EL + + S +++ C C
Sbjct: 1031 VPALGRVLETMGVDVSKWIKNVSVEL------NRLPLYIGKGSTVIEQFCVSAQCPLCGN 1084
Query: 932 LISNGT-LCSHC---KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV-LCTS 986
S + +C+ C GR+ L + + +++ + + +C +C G V C
Sbjct: 1085 QCSTQSPVCNRCLTRAGRKQSL-IELIKRIKSCQKIINENGERCNDCIGDPGTTVNCCMC 1143
Query: 987 RDCPIFYRRKKAQKDM 1002
C +F+ K A++ +
Sbjct: 1144 SGCNVFWETKLAEEQL 1159
Score = 43.9 bits (102), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 73/187 (39%), Gaps = 19/187 (10%)
Query: 102 IGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQ 161
+ +SNRE+ + +IFG T G C VHGF P Y++CP P+++ F
Sbjct: 30 VTNSNREI-----KRSPWFQIFGTTETGEHECLIVHGFFPEIYVNCPS--NPNELEQFTS 82
Query: 162 ILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILD 221
L + ++ + + + E + Y Q F+++ + P L
Sbjct: 83 ELISYIERDFGDTCIKSY-DYAEYIPA-----YGYQDKCKFIRLFLVQPDQQQQ----LG 132
Query: 222 RGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFD 281
R I K YE++ ++F+ N+ G +I + + LS E
Sbjct: 133 RHINAFAWNGKPHHAYEAHFPNFIKFLSKYNLTGFGYIRLKHA--WRVKSILSRYGTEVH 190
Query: 282 CLYSDII 288
C DII
Sbjct: 191 CRVEDII 197
>gi|241953567|ref|XP_002419505.1| DNA polymerase zeta catalytic subunit, putative [Candida dubliniensis
CD36]
gi|223642845|emb|CAX43100.1| DNA polymerase zeta catalytic subunit, putative [Candida dubliniensis
CD36]
Length = 1630
Score = 244 bits (624), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 316/641 (49%), Gaps = 78/641 (12%)
Query: 412 LQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVL 471
L+ GN + + Y + + ++++ I VE +R+ G+ + RG KV
Sbjct: 1000 LKEGNFSSLLTVLSYYINRVDIILKIINVQELITRNVEHSRLIGIEFNSNFYRGSQYKVE 1059
Query: 472 SQLLRKAKQKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMM 529
S L R K ++L++ P+ +Q + +LE ++ FY+ P+ LDF SLYPSIM+
Sbjct: 1060 SILARICKPESLLLNSPSKQQVHEMRPIECIPLILEPKSNFYKSPLVVLDFQSLYPSIMI 1119
Query: 530 AYNLCYSTLV--------TPEDA---RKLNLP---------PECVNKTPSGETFVKSNLQ 569
AYN CYSTLV T + L +P + N +P+G FVKS+++
Sbjct: 1120 AYNYCYSTLVGKLHNYRPTKNNIGYLHNLKIPFGLVNLLEKEDGFNISPNGFVFVKSHIR 1179
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVL-DGRQLALKISANSVYGFTGATV-GQ 627
K IL ++LEE+L+ R + K +K K+ E L + +QLALK+ AN YG+T AT G+
Sbjct: 1180 KSILAKMLEEILSIRIKIKQVMKLFKEDAELTKLYNSKQLALKLIANVTYGYTSATFSGR 1239
Query: 628 LPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQF-GVPTVE 686
+P +I+ ++ S GR+++ + +L++ G Y A+V+YGDTDS+ V F G P E
Sbjct: 1240 MPNSDIADAIVSTGREILNKSIELIDS-----GNY--GAKVVYGDTDSLFVYFPGKPKTE 1292
Query: 687 AAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGI 745
A KLG++ A I+ F P+KL+FEKVY+P +L++KKRY G Y + K D KGI
Sbjct: 1293 A-FKLGKQIAKTITDYFPDPVKLKFEKVYHPCVLLAKKRYVGFSYEYEDQTTPKFDAKGI 1351
Query: 746 ETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL-- 803
ETVRRD + + L + +++ QY ++ N++ + K +
Sbjct: 1352 ETVRRDGIPAQSKMTEKTLRILFETKNLSKVKQYTIDQFYKIIFNKVPIRDFCFAKEVRY 1411
Query: 804 -TKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYER---SEDPI 859
T + Y A + A+ M + D P +RVPYV+I+ + + +R ED I
Sbjct: 1412 GTYKNEKYLPPGAII--AKNMAEEDPRKEPQYRERVPYVVIRDSSKPRIKDRCISPEDFI 1469
Query: 860 YVLENNIP--IDTHYYLENQISKPLLRIFEPI---LKNASKEL---LSGDHTRSISISTP 911
E N P +D YY+ + PL RIF I + + +E+ + G H
Sbjct: 1470 RSYETNSPASLDYTYYITRVLIPPLERIFNLIGVDVNSWYREMPVVMRGSH--------- 1520
Query: 912 SNSGIMKFAKRQLSCIGC-KALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQ 970
+ +A+ C+ C L + +CS+C+ E E+ +S ++ E + +
Sbjct: 1521 -----VAYAE---GCLVCGNRLDDSANICSNCRTNEQEVIADVISTSRDTEEKLAEVESV 1572
Query: 971 CQEC-QGSLHQDV---------LCTSRDCPIFYRRKKAQKD 1001
C++C +G+ V C + DC ++Y + K +
Sbjct: 1573 CRDCVKGNTSSSVGSFIDQCTDNCVNGDCMVYYNKFKLNNE 1613
>gi|389568576|gb|AFK85012.1| DNA polymerase, partial [Tylonycteris robustula herpesvirus 1]
Length = 1030
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/508 (31%), Positives = 257/508 (50%), Gaps = 64/508 (12%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
EK D+ + I R ++ YC++DA L L DK+ + + +A ++ +P+
Sbjct: 512 EKVDLSYKEIPREFRSGDNGRAKVGHYCVQDAVLVADLFDKINYHYEAAAVANLSRLPMR 571
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGT--------------YEGATVLE 505
++ GQ I+V + +L +A +++V+P+ G + T Y+GATV E
Sbjct: 572 KVIFEGQQIRVFTCILEEAGTRDMVLPSFLGKGRKNSTEDADDAESDSNGVGYQGATVFE 631
Query: 506 ARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGET--- 562
+ G+Y+ P++ DFASLYPSI+MA NLCYST V E K+ + + P+ +
Sbjct: 632 PKIGYYDTPVSVFDFASLYPSIIMANNLCYSTYVFDEHVDKIR-EEDMLTVRPNSQDGVV 690
Query: 563 --FVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGF 620
FV+S++QK I+ E+L L RK + ++ DP ++ +LD +QLA+K++ NS YGF
Sbjct: 691 HRFVRSHVQKSIMAELLTRWLQRRKEIRESMRSCSDPTKRLLLDKQQLAIKVTCNSFYGF 750
Query: 621 TGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVG-------------GYEHNAE 667
TG G +P + I+SS+T GR+M+ T V F++V G E++ E
Sbjct: 751 TGVASGMMPWMPIASSITCIGREMLMSTSGYVHTHFSSVDFLRENFPVVEYIPGVEYHVE 810
Query: 668 VIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS-GTFIKPIKLEFEKVYYPYLLISKKRY 726
VIYGDTDSV V F T+ + + A +I+ F P+KLEFEKV+ ++I KKRY
Sbjct: 811 VIYGDTDSVFVNFRGVTMTSLVDAAPAMAAHITQKLFTYPVKLEFEKVFSVLMMICKKRY 870
Query: 727 AGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA---------- 776
G + + KG++ VR+ C VK +V E L + D ++ A
Sbjct: 871 IGRIHGS----SGLVMKGVDLVRKTACDYVKRVVRENLELLFSDSEVASAAVALSGMGIK 926
Query: 777 --------------VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVK-AAHVELAE 821
+Q + L NR+ +S LV++ L++ Y+ K H+ +
Sbjct: 927 EVLARGVPLGFHKILQRLCEARDALYENRVQVSQLVLSSVLSQDICRYKQKNLPHLAVIR 986
Query: 822 RMRKRDAATAPNVGDRVPYVIIKAAKGA 849
R+ R P+VGDRV YV+I GA
Sbjct: 987 RLASR-CEELPSVGDRVCYVLIAPPAGA 1013
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 139/323 (43%), Gaps = 55/323 (17%)
Query: 107 RELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGR 166
R ++P + IIR+FG T +G S+C V G YFY PDD+ +
Sbjct: 140 RHVVP----AGTIIRMFGCTEDGTSLCVNVFGQRSYFYCEYDD---PDDLQGLAYDIAEE 192
Query: 167 MREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVA--LPTMVASCRGILDRGI 224
+ +RN + + QKRSI+ Y L +V + P + + +LDRG+
Sbjct: 193 I-SGSRNVCI-----GVRRAQKRSILGYGNGNIDN-LNLVYSSNWPVIKRVAQCMLDRGL 245
Query: 225 QLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP---VGKYRKTAKTLSYCQLEFD 281
++ YE+ V RF+I+ + W + V Y A + +E D
Sbjct: 246 RV----------YEAIVDPVTRFVIERKLPTFGWCLLKRYHVRAYADGADRVFGSGVELD 295
Query: 282 CLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFP--EPTHDPVIQVA--------- 330
C D+ + +G+ S +R LSFDIEC FP E +D VIQ++
Sbjct: 296 CEVGDVFA--ADGDMS-WPVYRCLSFDIECMSADEGFPAAENANDIVIQISCVCRNVGGT 352
Query: 331 ------------NLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIR 378
+L + ++ T+ C+ I V+V +E ++LLA+ F++
Sbjct: 353 TSGSAGAETCQSSLESADAASDRETLHLFTVGPCSRIPRVNVYECPSEYEMLLAFFIFLK 412
Query: 379 EVDPDVMIGYNICKFDLPYLIEK 401
+ P+ + GYNI FD YL+ +
Sbjct: 413 KYSPEFITGYNINAFDFKYLLTR 435
>gi|350297217|gb|EGZ78194.1| hypothetical protein NEUTE2DRAFT_101866 [Neurospora tetrasperma FGSC
2509]
Length = 1925
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 164/493 (33%), Positives = 253/493 (51%), Gaps = 32/493 (6%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L +L+K I E AR+ GV + SRG KV S + R AK +N ++
Sbjct: 1144 YYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1203
Query: 486 --PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1204 ASPSRKQVGAQNALECLPLVMEPQSAFYSCPLLVLDFQSLYPSVMIAYNYCYSTFLGRIV 1263
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L +N P+G + K +++K +L ++L E+L R
Sbjct: 1264 SWRGKNKMGFMDYKRQEGLLSLLKNYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMV 1323
Query: 588 KADLKEAKD-PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K+ +K+ KD + + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+ +
Sbjct: 1324 KSGMKQDKDDKVIQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETL 1383
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E + +V + +AEV+YGDTDS+ V T E A ++G+E AD +S +
Sbjct: 1384 ERAIAFIH----SVQKW--DAEVVYGDTDSLFVSLKGRTREQAFEIGQEIADAVSKLNPR 1437
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + + D KGIETVRRD + + + L
Sbjct: 1438 PVKLKFEKVYHPCILLAKKRYVGYKYESRDQTVPVFDAKGIETVRRDGTPAEQRIEEKAL 1497
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVELA 820
+ D+ Y + ++ + + + G T A +A
Sbjct: 1498 KILFETADLSQVKSYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGALIA 1557
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQIS 879
+ K DA P G+RVPYV++ A G + +R +P +L N + +D YY+ I
Sbjct: 1558 TKKMKEDARAEPQYGERVPYVVMAGAPGMRLVDRCVEPEELLNNAHATLDAEYYINKNII 1617
Query: 880 KPLLRIFEPILKN 892
PL RIF + N
Sbjct: 1618 PPLERIFNLVGAN 1630
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+IR+FG T +G VC +HG PY Y+ + PD H + ++ R+ P
Sbjct: 42 VIRVFGSTDKGQKVCAHIHGAFPYLYVEYDGNLEPDKD---HALAISYRKDPIRDR--PI 96
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
+V I + + I +Y F LKI + P +++ +L +G+ + + F Y
Sbjct: 97 YVARITLT--KGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMS----RKFQPY 150
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
E+++ + L+FM D N+ G N+++ + +R
Sbjct: 151 EAHLQYLLQFMADYNLYGCNYLDAAMATFR 180
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L ++V E + + CQ C G + ++V C S+DCP+FY R
Sbjct: 1758 LCHRCASDPPTLMVDMQAKVSRAEKSYVEIMKVCQSCAGFASSEEVPCDSKDCPVFYSRV 1817
Query: 997 KAQKDMAEAK 1006
K + ++ K
Sbjct: 1818 KQRTNVTAVK 1827
>gi|118888|sp|P27172.1|DPOL_MCMVS RecName: Full=DNA polymerase
gi|330518|gb|AAA45940.1| DNA polymerase [Murid herpesvirus 1]
Length = 1097
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 272/568 (47%), Gaps = 90/568 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRAPGGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAG--------------------------- 492
++ GQ I++ + LL + +++++PN+ G
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHGAAAAIEEAAAGGEGDETSEGENSNN 597
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DAR 545
S Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D
Sbjct: 598 SRTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVL 657
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDG 605
++ + +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D
Sbjct: 658 RVEIGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDK 710
Query: 606 RQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTV 659
+QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV
Sbjct: 711 QQLALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTV 770
Query: 660 GGYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLE 710
G A ++IYGDTDSV F EA +K +G AA+ + F +P++LE
Sbjct: 771 LGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLE 830
Query: 711 FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
FEK++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D
Sbjct: 831 FEKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFND 886
Query: 771 RDIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA-------------- 815
+ G ++ + T DL N + + L + DD +K
Sbjct: 887 ETVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQE 946
Query: 816 ----------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVL 862
H+ + R+ R P VGDRV YV+ K YE +EDP +V+
Sbjct: 947 LSCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVV 1005
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPIL 890
E + I+ Y E Q+ K + P+
Sbjct: 1006 EAKLSINAEKYYE-QVVKAVTNTLMPVF 1032
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 150/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P + + +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DDVRFHTYDQVVNLVLADSDEQISPRWNSHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|403217770|emb|CCK72263.1| hypothetical protein KNAG_0J01820 [Kazachstania naganishii CBS 8797]
Length = 1514
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 186/609 (30%), Positives = 289/609 (47%), Gaps = 54/609 (8%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN-LVIPNVKQAGSEQ 495
+L K FI E +R+ G+ + RG +V S L R +N L++ K A EQ
Sbjct: 903 ILTKDDFIARTTEFSRLLGIDFHSVYHRGSQYRVESFLRRICGSENFLLLSPSKIAVKEQ 962
Query: 496 GTYEGA-TVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTP------EDAR--- 545
E ++E + FY+ P+ LDF SLYPS+M+A N CYST++ ED +
Sbjct: 963 KALECVPLIMEPESAFYKSPLVVLDFQSLYPSVMVAQNYCYSTMIGKVGDLNLEDNKIGV 1022
Query: 546 --------KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDP 597
L + + VN +P+G +VK +++K +L ++L E+L R K + + DP
Sbjct: 1023 TKVHLEKGVLKILKDDVNISPNGIVYVKPDIRKSMLAKMLTEILDLRVMVKKTMSQLDDP 1082
Query: 598 LE--KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVED 654
K L+ RQ+ALK+ AN YG+T A+ G++PC E++ S+ GR++++ L+E
Sbjct: 1083 PASLKKQLNNRQVALKLLANVTYGYTSASFSGRMPCSELADSIVQTGREILQKAIDLIE- 1141
Query: 655 KFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKV 714
A+V+YGDTDS+ V + E A ++G E + +S PI L+FEKV
Sbjct: 1142 -----MNDHWGAKVVYGDTDSLFVYLPGKSKEDAFRIGEEISIAVSKANPAPIFLKFEKV 1196
Query: 715 YYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDI 773
Y+P +L+SKKRY G + +K D KGIET+RRD + +V + L + +D+
Sbjct: 1197 YHPSILVSKKRYVGYAFEKRNQKEPIFDAKGIETIRRDGHPAQQKIVEKSLRLLFDTKDL 1256
Query: 774 PGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA-AHVELAERMRKRDAATAP 832
+YV+ + + N + + K + E A +A R + D P
Sbjct: 1257 SAVKKYVQEQFTKIEENNVSIQDFCFAKEVKLGAYKSEQTAPPGAVVAARQNEHDHRAHP 1316
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILK 891
+R+PYV+I+ G RS P L N N +D YY+ + PL R+F +
Sbjct: 1317 QYKERIPYVVIRGKAGDTLRSRSISPAEFLANPNCLLDAEYYIMKTLVPPLSRLFNIMGI 1376
Query: 892 NASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI---SNGTLCSHCK----G 944
N ++ + D TR S N QL C C + N LC C+ G
Sbjct: 1377 NVTE--WTYDLTRFNRHSAVGNKLTDNVGTSQL-CTNCSTNVISSENSLLCLKCEQDRSG 1433
Query: 945 REAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV---------LCTSRDCPIFYRR 995
A L +S+V+ + RL T C+ C +D C S DCPI+Y+R
Sbjct: 1434 TVANLLIDKLSRVETM----SRLDTVCRVCSYKYSRDASYQGESFARSCESYDCPIYYQR 1489
Query: 996 KKAQKDMAE 1004
KA + + +
Sbjct: 1490 IKADRKLID 1498
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 40/193 (20%)
Query: 110 LPLSSGS-AAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDIS--------HFH 160
LPL+ +IRI+G GH C VHG PY +I G ++ S H
Sbjct: 47 LPLNKYEYVPVIRIYGNIPSGHQTLCHVHGIFPYIFIPY-DGEFKNETSTIVNQKCTQLH 105
Query: 161 QILEGRMR-------EANRNSKVP------------------QFVRHIEMVQKRSIMYYQ 195
LE R+R ++ K P +++ ++ +V+ Y
Sbjct: 106 LTLENRIRVLFFQNKKSKNQDKGPGYNSGEKPESPINQLGNLKYIANVSVVKGMPFYGYH 165
Query: 196 QQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVG 255
S F KI + P+ V ++ G L+ +E+++ + L+F+ D N+ G
Sbjct: 166 TNWSL-FYKICLLNPSHVHRVTDLIRNGAALNS----DIEVFEAHIPYILQFLTDFNLFG 220
Query: 256 GNWIEVPVGKYRK 268
WI++ +R+
Sbjct: 221 CYWIKLQKCYFRQ 233
>gi|195380071|ref|XP_002048794.1| GJ21240 [Drosophila virilis]
gi|194143591|gb|EDW59987.1| GJ21240 [Drosophila virilis]
Length = 2044
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 185/606 (30%), Positives = 286/606 (47%), Gaps = 69/606 (11%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGSEQGTYEGATVLEA 506
EMA++ G+ +LSRG +V S +LR AK KNLV P+V+Q + A ++E
Sbjct: 1447 EMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQQRAHMRAPEYLALIMEP 1506
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---------TPED--ARKLN------- 548
+ FY P+ LDF SLYPS+++AYN C+ST + +P + A +L
Sbjct: 1507 ESRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGSSSPFEFGASQLRVSRPLLQ 1566
Query: 549 --LPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLDG 605
L + V +P G FVK +++GILP +L E+L R K +K +D + VL
Sbjct: 1567 QLLERDLVTISPCGVVFVKRQVREGILPRMLSEILDTRLMVKQSMKLHRDSSALQRVLHS 1626
Query: 606 RQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEH 664
RQL LK+ AN YG+T A G++P +E+ SV + GR+ +E KLVE +
Sbjct: 1627 RQLGLKLMANVTYGYTAANFSGRMPAVEVGDSVVAKGRETLERAIKLVETH------EKW 1680
Query: 665 NAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKK 724
N V+YGDTDS+ V A ++G E A ++ P+KL+ EKVY P +L +KK
Sbjct: 1681 NVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAQAVTEMNPHPVKLKLEKVYQPCVLQTKK 1740
Query: 725 RYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKST 783
RY G + PE+ + + KGIETVRRD C V ++ + L + D+ QYV
Sbjct: 1741 RYVGYMYETPEQQQPVYEAKGIETVRRDGCPAVAKMLEKVLRLLFETADVSLIKQYVCRQ 1800
Query: 784 ISDLLMNRMDLSLLVITK---GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPY 840
+ LL R +L L+ K GL V A +E+ + ++D P G+RVP+
Sbjct: 1801 FTKLLSGRANLQDLIFAKEFRGLNGYKPTACVPA--LEMTRKWMQKDPRRVPRRGERVPF 1858
Query: 841 VIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLR--------------- 884
II G P VL N I+ YY+ I PL R
Sbjct: 1859 CIINGPPGVPLIRLVRSPHEVLANEGYKINAIYYITKAIIPPLNRCLLLIGADVNDWFSN 1918
Query: 885 -----IFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLC 939
+ P L A + + G +IS +++ I+ ++ + +C
Sbjct: 1919 LPRRLLIMPALSTAGELMNRGSAKSTISQYFSTSNCIIDCGRQ-----------TKAGIC 1967
Query: 940 SHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQ 999
+ C ++ +++ +LE + CQ C G L ++ C S DCP+ Y + +
Sbjct: 1968 TDCARNASKCVVTLQAKLAQLERGYRLTQQICQACCGRLG-ELQCGSLDCPVLYVLEVKR 2026
Query: 1000 KDMAEA 1005
+++ +A
Sbjct: 2027 RELQQA 2032
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 75/163 (46%), Gaps = 25/163 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------- 170
I+RIFG G C VHG PYFYI P D F + G ++ A
Sbjct: 43 IVRIFGANANGQKCCMHVHGVFPYFYI-------PYDRRDFESVERGILQIAMHLDKAIN 95
Query: 171 ---NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
+ S Q V I++V+ Y + + Q F KI + P V +L G L
Sbjct: 96 ISLGQGSSNAQHVFKIQLVKGIPFYGYHRTEHQ-FFKIFMFNPRFVRRAANLLQSGAILS 154
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP--VGKYRK 268
++F +ES+V + L+FMID N+ G +++ VP V K+R+
Sbjct: 155 ----RNFNPHESHVPYILQFMIDYNLYGMSYLHVPLEVVKFRR 193
>gi|380093792|emb|CCC08756.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1959
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 254/495 (51%), Gaps = 36/495 (7%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN--L 483
Y L L +L+K I E AR+ GV + SRG KV S + R AK +N L
Sbjct: 1160 YYLTRTRLDIEILEKNELIARTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1219
Query: 484 VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
+ P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1220 ISPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIV 1279
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L + +N +P+G + K +++K +L ++L E+L R
Sbjct: 1280 SWRGTNKMGFMDYKRQEGLLSLLKDYINISPNGMMYTKPHIRKSLLAKMLTEILETRIMV 1339
Query: 588 KADLKEAKDPLEKAV---LDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQ 643
K+ +K+ KD +KA+ L RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+
Sbjct: 1340 KSGMKQDKD--DKALQQLLKNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRE 1397
Query: 644 MIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTF 703
+E + +V + +AEV+YGDTDS+ V T + A +G+E AD ++
Sbjct: 1398 TLERAIAFIH----SVQKW--DAEVVYGDTDSLFVYLKGRTRDQAFDIGQEIADAVTKMN 1451
Query: 704 IKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTE 762
+P+KL+FEKVY+P +LI+KKRY G Y + + D KGIETVRRD + + +
Sbjct: 1452 PRPVKLKFEKVYHPCVLIAKKRYVGYKYESRDQTVPDFDAKGIETVRRDGTPAEQRIEEK 1511
Query: 763 CLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVE 818
L + D+ Y + ++ + + + G T A
Sbjct: 1512 ALKILFETADLSQVKAYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGAL 1571
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQ 877
+A + + DA P G+RVPYV++ A G + +R +P +L N + +D YY+
Sbjct: 1572 IATKKMREDARAEPQYGERVPYVVMAGAPGMRLVDRCVEPEELLNNSHATLDADYYINKN 1631
Query: 878 ISKPLLRIFEPILKN 892
I PL RIF + N
Sbjct: 1632 IIPPLERIFNLVGAN 1646
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGM----GPDDISHFHQILEGRMREANRNS 174
+IR+FG T G VC +HG PY Y+ + + IS F ++ + + R
Sbjct: 42 VIRVFGSTETGQKVCAHIHGAFPYLYVEYDGSLEVIKANEYISKFRASIDHALAVSYRKD 101
Query: 175 KV---PQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLDGLG 230
+ P +V I + + I +Y F LKI + P +++ +L +G+ +
Sbjct: 102 PLHDRPLYVARITLT--KGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMS--- 156
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ F YE+++ + L+FM D N+ G ++++ + +R
Sbjct: 157 -RKFQPYEAHLQYLLQFMADYNLYGCDYLDAAMVTFR 192
Score = 42.7 bits (99), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L ++V E + + CQ C G + ++V C S+DCP+FY R
Sbjct: 1781 LCRRCASDPPTLLVDMQTKVSRAEKSYVEIMKVCQSCSGFAPTEEVPCDSKDCPVFYSRV 1840
Query: 997 KAQKDMAEAK 1006
K + M K
Sbjct: 1841 KQRTKMNAEK 1850
>gi|336264642|ref|XP_003347097.1| hypothetical protein SMAC_05396 [Sordaria macrospora k-hell]
Length = 1947
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 254/495 (51%), Gaps = 36/495 (7%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN--L 483
Y L L +L+K I E AR+ GV + SRG KV S + R AK +N L
Sbjct: 1148 YYLTRTRLDIEILEKNELIARTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1207
Query: 484 VIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
+ P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1208 ISPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIV 1267
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L + +N +P+G + K +++K +L ++L E+L R
Sbjct: 1268 SWRGTNKMGFMDYKRQEGLLSLLKDYINISPNGMMYTKPHIRKSLLAKMLTEILETRIMV 1327
Query: 588 KADLKEAKDPLEKAV---LDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQ 643
K+ +K+ KD +KA+ L RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+
Sbjct: 1328 KSGMKQDKD--DKALQQLLKNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRE 1385
Query: 644 MIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTF 703
+E + +V + +AEV+YGDTDS+ V T + A +G+E AD ++
Sbjct: 1386 TLERAIAFIH----SVQKW--DAEVVYGDTDSLFVYLKGRTRDQAFDIGQEIADAVTKMN 1439
Query: 704 IKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTE 762
+P+KL+FEKVY+P +LI+KKRY G Y + + D KGIETVRRD + + +
Sbjct: 1440 PRPVKLKFEKVYHPCVLIAKKRYVGYKYESRDQTVPDFDAKGIETVRRDGTPAEQRIEEK 1499
Query: 763 CLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVE 818
L + D+ Y + ++ + + + G T A
Sbjct: 1500 ALKILFETADLSQVKAYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGAL 1559
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQ 877
+A + + DA P G+RVPYV++ A G + +R +P +L N + +D YY+
Sbjct: 1560 IATKKMREDARAEPQYGERVPYVVMAGAPGMRLVDRCVEPEELLNNSHATLDADYYINKN 1619
Query: 878 ISKPLLRIFEPILKN 892
I PL RIF + N
Sbjct: 1620 IIPPLERIFNLVGAN 1634
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+IR+FG T G VC +HG PY Y+ G ++ H + ++ + P
Sbjct: 42 VIRVFGSTETGQKVCAHIHGAFPYLYVEYD---GSLEVIKDHALAVSYRKDPLHDR--PL 96
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
+V I + + I +Y F LKI + P +++ +L +G+ + + F Y
Sbjct: 97 YVARITLT--KGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMS----RKFQPY 150
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
E+++ + L+FM D N+ G ++++ + +R
Sbjct: 151 EAHLQYLLQFMADYNLYGCDYLDAAMVTFR 180
Score = 42.7 bits (99), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L ++V E + + CQ C G + ++V C S+DCP+FY R
Sbjct: 1769 LCRRCASDPPTLLVDMQTKVSRAEKSYVEIMKVCQSCSGFAPTEEVPCDSKDCPVFYSRV 1828
Query: 997 KAQKDMAEAK 1006
K + M K
Sbjct: 1829 KQRTKMNAEK 1838
>gi|194755285|ref|XP_001959922.1| GF13111 [Drosophila ananassae]
gi|190621220|gb|EDV36744.1| GF13111 [Drosophila ananassae]
Length = 2124
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 180/595 (30%), Positives = 283/595 (47%), Gaps = 49/595 (8%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGSEQGTYEGATVLEA 506
EMA++ G+ +LSRG +V S +LR AK KNLV P+V+Q + A ++E
Sbjct: 1528 EMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQQRAHMRAPEYLALIMEP 1587
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---------------------VTPEDAR 545
++ FY P+ LDF SLYPS+++ YN C+ST V+ + +
Sbjct: 1588 QSRFYADPLIVLDFQSLYPSMIIGYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQMLQ 1647
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLD 604
KL L + V +P G FVK +++GILP +L E+L R+ K +K KD + +L
Sbjct: 1648 KL-LEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHKDSSALQRILH 1706
Query: 605 GRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYE 663
RQL LK+ AN YG+T A G++P +E+ SV S GR+ +E K+VE E
Sbjct: 1707 SRQLGLKLMANVTYGYTAANFSGRMPAVEVGDSVVSKGRETLERAIKMVE------SNEE 1760
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISK 723
V+YGDTDS+ V A ++G E A ++ +P+KL+ EKVY P LL +K
Sbjct: 1761 WKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAQAVTDMNPQPVKLKLEKVYQPCLLQTK 1820
Query: 724 KRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS 782
KRY G + P++ + + KGIETVRRD C V ++ + L + +D+ QYV
Sbjct: 1821 KRYVGYMYETPDQAQPVYEAKGIETVRRDGCPAVAKMLEKVLRLLFETQDVSQIKQYVCR 1880
Query: 783 TISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAATAPNVGDRVPY 840
+ LL R +L L+ K + + Y+ A + L + ++D P G+RVP+
Sbjct: 1881 QFTKLLSGRANLQDLIFAKEF-RGLNGYKPTACVPALALTRKWMQKDPRKVPRRGERVPF 1939
Query: 841 VIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPI-------LKN 892
+I+ G + P +L N I+ YY+ I PL R I +
Sbjct: 1940 IIVNGPPGMQLIRLVRSPHDILANEGHKINAIYYITKAIIPPLNRCLLLIGADVHDWFAS 1999
Query: 893 ASKELL---SGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAEL 949
++LL + ++ + S I ++ + C G +C C +
Sbjct: 2000 LPRKLLMTPTVGTANEVAGGKGTKSTISQYFSTTNCVVECGRQTKAG-ICPECLKDASRC 2058
Query: 950 YCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAE 1004
++ LE + CQ C G L + + C S DCP+ Y + ++D+ +
Sbjct: 2059 VVVLADKMARLERSYQLTRQICQSCCGRLGE-LQCNSLDCPVTYVSEGKRRDLQQ 2112
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 25/164 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------- 170
++R+FG G C VHG PYFYI P D F + G ++ A
Sbjct: 47 VVRVFGANSSGQKTCMHVHGVFPYFYI-------PYDKKDFESLERGILQMAIHLDKAIN 99
Query: 171 ---NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
+ S Q V I++V+ Y + + Q FLKI + P V +L G L
Sbjct: 100 ISLGQGSSNAQHVFKIQLVKGIPFYGYHRVEHQ-FLKIYMFNPRFVRRAANLLQSGAILS 158
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP--VGKYRKT 269
K+F +ES+V + L+FMID N+ G +++ VP V K+R++
Sbjct: 159 ----KNFSPHESHVPYILQFMIDYNLYGMSYLHVPMEVLKFRRS 198
>gi|13242564|ref|NP_077578.1| EsV-1-93 [Ectocarpus siliculosus virus 1]
gi|13177367|gb|AAK14511.1|AF204951_93 EsV-1-93 [Ectocarpus siliculosus virus 1]
Length = 1046
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 170/461 (36%), Positives = 254/461 (55%), Gaps = 45/461 (9%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAV---YCLKDAYLPQRLLDKLMFIFNYVEMARVTGV 456
+K+DV ++ I LQ ++ ++L V YC +D+ L +LLDK+ +++ EMA++ V
Sbjct: 389 KKDDVTYADI--LQACTSKDPKKLGVIAKYCYQDSGLVLKLLDKIKEVYDATEMAKLCTV 446
Query: 457 PISFLLSRGQSIKVLSQLLRKAKQKNL---------VIPNVKQAGSEQGTYEGATVLEAR 507
P+++++ RGQ IK +S +L + + + + + KQ +E Y+GA+V++A+
Sbjct: 447 PLTYIVGRGQQIKCMSLILNRIHGEYVCNYAAAKKKMAADGKQVLNE--GYKGASVIDAK 504
Query: 508 AGFYEK-PIATLDFASLYPSIMMAYNLCYSTLVTPEDARKL---NLPPECVNKTPSGETF 563
GFYEK PI T+DFASLYPSIM LCY+T+V R + N ++ S TF
Sbjct: 505 KGFYEKDPIVTMDFASLYPSIMRLKQLCYTTIVRDVKYRGIEGVNYEDHQISDGVS-VTF 563
Query: 564 VKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGA 623
+ IL E+ E L RK K +K KDP ++LD +Q A K++ NS+YGFTG
Sbjct: 564 AHRPGSRSILCELEEMLGEERKATKKLMKSEKDPFAYSLLDSKQKAQKVTMNSIYGFTGT 623
Query: 624 -TVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQF-- 680
G LP +EI+++VTS GR MI+ TK+ E EH VIYGDTDSVMV F
Sbjct: 624 VNNGMLPLVEIAAAVTSTGRDMIKRTKEYAEK--------EHGCNVIYGDTDSVMVIFPE 675
Query: 681 --GVPTVEAAMK----LGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNP 734
+ + M+ +G + + IS F PI LEFE +Y+ YLL+SKKRYAGL W
Sbjct: 676 HRNIENLGDKMRYCFDMGTKVSKEISEMFGHPILLEFENIYFKYLLVSKKRYAGLSWETV 735
Query: 735 EKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLM----N 790
E M KG+ TVRRDN V +E +H +L+D D+ VK +++ L+
Sbjct: 736 EGPPTMTMKGLVTVRRDNAPFVGRCASEAIH-MLMDVDVTDGRGAVKKHLTETLLRLERG 794
Query: 791 RMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATA 831
++ + L I K L + Y+ + H LA ++ +R A
Sbjct: 795 QISIEDLTIRKELKQWV--YKTPSPHATLALKILERTKEQA 833
>gi|393245811|gb|EJD53321.1| DNA/RNA polymerase [Auricularia delicata TFB-10046 SS5]
Length = 822
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 247/485 (50%), Gaps = 58/485 (11%)
Query: 431 AYLPQR------LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV 484
AYL +R +L + I +VE ARV G+ S +SRG KV S L R AK ++ V
Sbjct: 340 AYLAERTASVLDILHETETISKHVESARVLGIDFSSSVSRGSQYKVESFLFRIAKPESFV 399
Query: 485 I--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPE 542
+ P+ ++ G ++ TY VLE AGFY P+ LDF SLYPSIM+AYN CYST +
Sbjct: 400 MLSPSHEEVGKQESTYATPMVLEPSAGFYPSPLVVLDFQSLYPSIMIAYNYCYSTCLGRV 459
Query: 543 DARK----------LNLPPECVNK-------TPSGETFVKSNLQKGILPEILEELLAARK 585
+ ++ LPP ++K P+G + K ++ G+L +L+ELL R
Sbjct: 460 EGQQSHQRLGVRPEFKLPPGLLDKLQDYISVAPNGIMYAKKEVRAGLLGRMLQELLDTRV 519
Query: 586 RAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGA-TVGQLPCIEISSSVTSYGRQ 643
+ +K +K D + + LD RQL+LK N+ YG+T A + G++P +EI+ SV GR+
Sbjct: 520 MVQQAMKSSKGDQVFQRALDARQLSLKFICNTTYGYTSAGSCGRMPAVEIADSVVQSGRE 579
Query: 644 MIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTF 703
+E + +++ T+ G A V+YGDTDS+ V T E A ++G + AD I+
Sbjct: 580 TLEQAMRTIQN--TSKWG----ATVVYGDTDSIFVCLPGRTKEQAFRIGHDMADKITAMN 633
Query: 704 IKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTE 762
+PIKL+FEKVY P LL+ KKRYAGL + +P++ + + D KGIETVRRD + +
Sbjct: 634 PEPIKLKFEKVYLPSLLMGKKRYAGLAYKDPDELEPVFDAKGIETVRRDGIPCTQKMQEA 693
Query: 763 CLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAER 822
L + +D+ Y + T ++L R L + K +
Sbjct: 694 VLRMLFETQDLSAIKTYCERTWRNILEGREQLQEFIFAKEVC------------------ 735
Query: 823 MRKRDAATAPNVGDRVPYVIIKA-AKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKP 881
T DR+ +V+ + A G R+ P L+ + +D YY+E +
Sbjct: 736 -----MGTTVQYADRIKFVVAQGRAPGEHVVNRAFSPEEFLDLGLELDVDYYIEKMLIPS 790
Query: 882 LLRIF 886
L R+
Sbjct: 791 LHRVL 795
>gi|44491707|gb|AAS47466.1| DNA polymerase [Murid herpesvirus 4]
gi|44491709|gb|AAS47467.1| DNA polymerase [Murid herpesvirus 4]
Length = 1097
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 170/568 (29%), Positives = 272/568 (47%), Gaps = 90/568 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV---------------------------KQAG 492
++ GQ I++ + LL + +++++PN+
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHEAAAAIEEAAAGGEGDETSEGENSNN 597
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DAR 545
S Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D
Sbjct: 598 SRTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVL 657
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDG 605
++ + +C FV+ N+ + +L E+L L RK + +K+ + +++ ++D
Sbjct: 658 RVEIGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMIMDK 710
Query: 606 RQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTV 659
+QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV
Sbjct: 711 QQLALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTV 770
Query: 660 GGYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLE 710
G A ++IYGDTDSV F EA +K +G AA+ + F + ++LE
Sbjct: 771 LGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKERVRLE 830
Query: 711 FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
FEK++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D
Sbjct: 831 FEKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFND 886
Query: 771 RDIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA-------------- 815
+ G ++ + T DL N + + L + DD +K
Sbjct: 887 ETVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQE 946
Query: 816 ----------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVL 862
H+ + R+ R P VGDRV YV+ K YE +EDP +V+
Sbjct: 947 LSCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVV 1005
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPIL 890
E + I+ Y E Q+ K + P+
Sbjct: 1006 EAKLSINAEKYYE-QVVKAVTNTLMPVF 1032
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 149/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|85112057|ref|XP_964235.1| hypothetical protein NCU01951 [Neurospora crassa OR74A]
gi|18150172|dbj|BAB83627.1| catalytic subunit of DNA polymerase zeta [Neurospora crassa]
gi|28926008|gb|EAA34999.1| hypothetical protein NCU01951 [Neurospora crassa OR74A]
Length = 1926
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 253/493 (51%), Gaps = 32/493 (6%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L +L+K I E AR+ GV + SRG KV S + R AK +N ++
Sbjct: 1144 YYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1203
Query: 486 PNV--KQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1204 PSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIV 1263
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L + +N P+G + K +++K +L ++L E+L R
Sbjct: 1264 SWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMV 1323
Query: 588 KADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+ +
Sbjct: 1324 KSGMKQDKDDRAIQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETL 1383
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E + +V + +A+V+YGDTDS+ V T E A ++G+E AD ++ +
Sbjct: 1384 ERAIAFIH----SVQKW--DADVVYGDTDSLFVSLKGRTREQAFEIGQEIADAVTKLNPR 1437
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + + D KGIETVRRD + + + L
Sbjct: 1438 PVKLKFEKVYHPCVLLAKKRYVGYKYESRDQTVPVFDAKGIETVRRDGTPAEQRIEEKAL 1497
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVELA 820
+ D+ Y + ++ + + + G T A +A
Sbjct: 1498 KILFETADLSQVKSYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGALIA 1557
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQIS 879
+ K DA P G+RVPYV++ A G + +R +P +L N + +D YY+ I
Sbjct: 1558 TKKMKEDARAEPQYGERVPYVVMAGAPGMRLVDRCVEPEELLNNAHATLDADYYINKNII 1617
Query: 880 KPLLRIFEPILKN 892
PL RIF + N
Sbjct: 1618 PPLERIFNLVGAN 1630
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
+ +IR+FG T +G VC +HG PY Y+ + P+ H + ++ R+
Sbjct: 37 AAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDGNLEPNKD---HALAISYRKDPIRD 93
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLDGLGMK 232
P++V I + + I +Y F LKI + P +++ +L +G+ + +
Sbjct: 94 R--PKYVARISLT--KGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMS----R 145
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F YE+++ + L+FM D N+ G N+++ + +R
Sbjct: 146 KFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFR 180
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L ++V E + + CQ C G +L ++V C S+DCP+FY R
Sbjct: 1759 LCHRCASDPPTLMVDMQAKVNRAEKSYVEIMKVCQSCAGFALSEEVPCDSKDCPVFYSRV 1818
Query: 997 KAQKDMAEAK 1006
K + + K
Sbjct: 1819 KQRTKVTAVK 1828
>gi|88604884|gb|ABD46762.1| REV3 [Neurospora crassa]
Length = 1926
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 253/493 (51%), Gaps = 32/493 (6%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L +L+K I E AR+ GV + SRG KV S + R AK +N ++
Sbjct: 1144 YYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1203
Query: 486 PNV--KQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1204 PSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIV 1263
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L + +N P+G + K +++K +L ++L E+L R
Sbjct: 1264 SWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMV 1323
Query: 588 KADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+ +
Sbjct: 1324 KSGMKQDKDDRAIQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETL 1383
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E + +V + +A+V+YGDTDS+ V T E A ++G+E AD ++ +
Sbjct: 1384 ERAIAFIH----SVQKW--DADVVYGDTDSLFVSLKGRTREQAFEIGQEIADAVTKLNPR 1437
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + + D KGIETVRRD + + + L
Sbjct: 1438 PVKLKFEKVYHPCVLLAKKRYVGYKYESRDQTVPVFDAKGIETVRRDGTPAEQRIEEKAL 1497
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVELA 820
+ D+ Y + ++ + + + G T A +A
Sbjct: 1498 KILFETADLSQVKSYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGALIA 1557
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQIS 879
+ K DA P G+RVPYV++ A G + +R +P +L N + +D YY+ I
Sbjct: 1558 TKKMKEDARAEPQYGERVPYVVMAGAPGMRLVDRCVEPEELLNNAHATLDADYYINKNII 1617
Query: 880 KPLLRIFEPILKN 892
PL RIF + N
Sbjct: 1618 PPLERIFNLVGAN 1630
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
+ +IR+FG T +G VC +HG PY Y+ + P+ H + ++ R+
Sbjct: 37 AAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDGNLEPNKD---HALAISYRKDPIRD 93
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLDGLGMK 232
P++V I + + I +Y F LKI + P +++ +L +G+ + +
Sbjct: 94 R--PKYVARISLT--KGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMS----R 145
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F YE+++ + L+FM D N+ G N+++ + +R
Sbjct: 146 KFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFR 180
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L ++V E + + CQ C G +L ++V C S+DCP+FY R
Sbjct: 1759 LCHRCASDPPTLMVDMQAKVNRAEKSYVEIMKVCQSCAGFALSEEVPCDSKDCPVFYSRV 1818
Query: 997 KAQKDMAEAK 1006
K + + K
Sbjct: 1819 KQRTKVTAVK 1828
>gi|16198207|gb|AAL13918.1| LD40801p [Drosophila melanogaster]
Length = 1325
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 185/604 (30%), Positives = 286/604 (47%), Gaps = 53/604 (8%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGSEQGTYEGATVLEA 506
EMA++ G+ +LSRG +V S +LR AK KNLV P+V+ + A ++E
Sbjct: 729 EMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQARAHMRAPEYLALIMEP 788
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---------------------VTPEDAR 545
++ FY P+ LDF SLYPS+++AYN C+ST V+ + +
Sbjct: 789 QSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQMLQ 848
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLD 604
KL L + V +P G FVK +++GILP +L E+L R+ K +K KD + +L
Sbjct: 849 KL-LEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHKDSSALQRILH 907
Query: 605 GRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYE 663
RQL LK+ AN YG+T A G++P +E+ SV S GR+ +E KLVE+ E
Sbjct: 908 SRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSVVSKGRETLERAIKLVEN------NEE 961
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISK 723
V+YGDTDS+ V A ++G E A ++ +P+KL+ EKVY P +L +K
Sbjct: 962 WKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAKAVTEMNPQPVKLKLEKVYQPCMLQTK 1021
Query: 724 KRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS 782
KRY G +Y T ++ + KGIETVRRD C V ++ + L + +D+ YV
Sbjct: 1022 KRYVGYMYETADQEQPVYEAKGIETVRRDGCPAVAKMLEKVLRILFETQDVSKIKAYVCR 1081
Query: 783 TISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAATAPNVGDRVPY 840
+ LL R +L L+ K + + Y+ A +EL + ++D P G+RVP+
Sbjct: 1082 QFTKLLSGRANLQDLIFAKEF-RGLNGYKPTACVPALELTRKWMQKDPRHVPRRGERVPF 1140
Query: 841 VIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNAS----- 894
+I+ G + P +L N I+ YY+ I PL R I N
Sbjct: 1141 IIVNGPPGMQLIRLVRSPHDILANEGHKINAIYYITKAIIPPLNRCLLLIGANVHDWFAS 1200
Query: 895 --KELL---SGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAEL 949
++LL + ++ + + S I ++ I C G +C C
Sbjct: 1201 LPRKLLMTPAVGTANELAGARGAKSTISQYFSTTSCVIDCGRQTKAG-ICPDCLKNATTC 1259
Query: 950 YCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQL 1009
+ LE + CQ C G L + C S DCP+ Y + ++++ Q+
Sbjct: 1260 VVVLSDKTARLERGYQLTRQICQACCGRLG-SLQCDSLDCPVLYVLEGKRRELQ----QI 1314
Query: 1010 DRWN 1013
+ WN
Sbjct: 1315 EHWN 1318
>gi|78523225|gb|ABB46350.1| UPR1 [Neurospora tetrasperma]
Length = 1926
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 252/493 (51%), Gaps = 32/493 (6%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L +L+K I E R+ GV + SRG KV S + R AK +N ++
Sbjct: 1144 YYLTRTRLDIEILEKNELIPRTSEQVRLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1203
Query: 486 --PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1204 ASPSRKQVGAQNALECLPLVMEPQSAFYSCPLLVLDFQSLYPSVMIAYNYCYSTFLGRIV 1263
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L + +N P+G + K +++K +L ++L E+L R
Sbjct: 1264 SWRGKNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMV 1323
Query: 588 KADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+ +
Sbjct: 1324 KSGMKQDKDDRAIQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETL 1383
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E + +V + +AEV+YGDTDS+ V T E A ++G+E AD +S +
Sbjct: 1384 ERAIAFIH----SVQKW--DAEVVYGDTDSLFVSLKGRTREQAFEIGQEIADAVSKLNPR 1437
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + + D KGIETVRRD + + + L
Sbjct: 1438 PVKLKFEKVYHPCILLAKKRYVGYKYESRDQTVPVFDAKGIETVRRDGTPAEQRIEEKAL 1497
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVELA 820
+ D+ Y + ++ + + + G T A +A
Sbjct: 1498 KILFETADLSQVKSYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGALIA 1557
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQIS 879
+ K DA P G+RVPYV++ A G + +R +P +L N + +D YY+ I
Sbjct: 1558 TKKMKEDARAEPQYGERVPYVVMAGAPGMRLVDRCVEPEELLNNAHATLDAEYYINKNII 1617
Query: 880 KPLLRIFEPILKN 892
PL RIF + N
Sbjct: 1618 PPLERIFNLVGAN 1630
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+IR+FG T +G VC +HG PY Y+ + P+ H + ++ R+ P
Sbjct: 42 VIRVFGSTDKGQKVCAHIHGAFPYLYVEYDGNLEPNKD---HALAISYRKDPIRDR--PI 96
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
+V I + + I +Y F LKI + P +++ +L +G+ + + F Y
Sbjct: 97 YVARITLT--KGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMS----RKFQPY 150
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
E+++ + L+FM D N+ G N+++ + +R
Sbjct: 151 EAHLQYLLQFMADYNLYGCNYLDAAMATFR 180
Score = 42.0 bits (97), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L ++V E + + CQ C G + ++V C S+DCP+FY R
Sbjct: 1759 LCHRCASDPPTLMVDMQAKVNRAEKSYVEIMKVCQSCAGFASSEEVPCDSKDCPVFYSRV 1818
Query: 997 KAQKDMAEAK 1006
K + + K
Sbjct: 1819 KQRTKVTAVK 1828
>gi|88604886|gb|ABD46763.1| REV3 [Neurospora crassa]
Length = 1926
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 252/493 (51%), Gaps = 32/493 (6%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L +L+K I E AR+ GV + SRG KV S + R AK +N ++
Sbjct: 1144 YYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1203
Query: 486 PNV--KQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1204 PSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIV 1263
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L + +N P+G + K +++K +L ++L E+L R
Sbjct: 1264 SWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMV 1323
Query: 588 KADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K+ +K+ D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+ +
Sbjct: 1324 KSGMKQDMDDRAIQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETL 1383
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E + +V + +AEV+YGDTDS+ V T E A ++G+E AD ++ +
Sbjct: 1384 ERAIAFIH----SVQKW--DAEVVYGDTDSLFVSLKGRTREQAFEIGQEIADAVTKLNPR 1437
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + + D KGIETVRRD + + + L
Sbjct: 1438 PVKLKFEKVYHPCVLLAKKRYVGYKYESRDQNVPVFDAKGIETVRRDGTPAEQRIEEQAL 1497
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVELA 820
+ D+ Y + ++ + + + G T A +A
Sbjct: 1498 KILFETADLSQVKSYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGALIA 1557
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQIS 879
+ K DA P G+RVPYV++ A G + +R +P +L N + +D YY+ I
Sbjct: 1558 TKKMKEDARAEPQYGERVPYVVMAGAPGMRLVDRCVEPEELLNNAHATLDADYYINKNII 1617
Query: 880 KPLLRIFEPILKN 892
PL RIF + N
Sbjct: 1618 PPLERIFNLVGAN 1630
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
+ +IR+FG T +G VC +HG PY Y+ + P+ H + ++ R+
Sbjct: 37 AAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDGNLEPNKD---HALAISYRKDPIRD 93
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLDGLGMK 232
P++V I + + I +Y F LKI + P +++ +L +G+ + +
Sbjct: 94 R--PKYVARISLT--KGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMS----R 145
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F YE+++ + L+FM D N+ G N+++ + +R
Sbjct: 146 KFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFR 180
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L ++V E + + CQ C G +L ++V C S+DCP+FY R
Sbjct: 1759 LCHRCASDPPTLMVDMQAKVNRAEKSYVEIMKVCQSCAGFALSEEVPCDSKDCPVFYSRV 1818
Query: 997 KAQKDMAEAK 1006
K + + K
Sbjct: 1819 KQRTKVTAVK 1828
>gi|68236020|gb|AAY88346.1| REV3 [Neurospora crassa]
Length = 1926
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 253/493 (51%), Gaps = 32/493 (6%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L +L+K I E AR+ GV + SRG KV S + R AK +N ++
Sbjct: 1144 YYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1203
Query: 486 PNV--KQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1204 PSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIV 1263
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L + +N P+G + K +++K +L ++L E+L R
Sbjct: 1264 SWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMV 1323
Query: 588 KADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+ +
Sbjct: 1324 KSGMKQDKDDRAIQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETL 1383
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E + +V + +A+V+YGDTDS+ V T E A ++G+E AD ++ +
Sbjct: 1384 ERAIAFIH----SVQKW--DADVVYGDTDSLFVSLKGRTREQAFEIGQEIADAVTKLNPR 1437
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + + D KGIETVRRD + + + L
Sbjct: 1438 PVKLKFEKVYHPCVLLAKKRYVGYKYESRDQTVPVFDAKGIETVRRDGTPAEQRIEEKAL 1497
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVELA 820
+ D+ Y + ++ + + + G T A +A
Sbjct: 1498 KILFETADLSQVKSYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGALIA 1557
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQIS 879
+ K DA P G+RVPYV++ A G + +R +P +L N + +D YY+ I
Sbjct: 1558 TKKMKEDARAEPQYGERVPYVVMAGAPGMRLVDRCVEPEELLNNAHATLDADYYINKNII 1617
Query: 880 KPLLRIFEPILKN 892
PL RIF + N
Sbjct: 1618 PPLERIFNLVGAN 1630
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+IR+FG T +G VC +HG PY Y+ + P+ H + ++ R+ P+
Sbjct: 42 VIRVFGSTDKGQKVCAHIHGAFPYLYVEYDGNLEPNKD---HALAISYRKDPIRDR--PK 96
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
+V I + + I +Y F LKI + P +++ +L +G+ + + F Y
Sbjct: 97 YVARISLT--KGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMS----RKFQPY 150
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
E+++ + L+FM D N+ G N+++ + +R
Sbjct: 151 EAHLQYLLQFMADYNLYGCNYLDAAMATFR 180
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L ++V E + + CQ C G +L ++V C S+DCP+FY R
Sbjct: 1759 LCHRCASDPPTLMVDMQAKVNRAEKSYVEIMKVCQSCAGFALSEEVPCDSKDCPVFYSRV 1818
Query: 997 KAQKDMAEAK 1006
K + + K
Sbjct: 1819 KQRTKVTAVK 1828
>gi|391334923|ref|XP_003741848.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Metaseiulus
occidentalis]
Length = 1420
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 171/606 (28%), Positives = 292/606 (48%), Gaps = 56/606 (9%)
Query: 431 AYLPQR------LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV 484
+YL +R L++KL EMAR+ G+ +LSRG +V S +LR ++K V
Sbjct: 810 SYLAKRCAGCFHLIEKLELYTKTCEMARIYGIQFYEVLSRGSQFRVESMMLRSTRKKGYV 869
Query: 485 I--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV--- 539
P V ++ V+E + FY P+ LDF SLYPS+M+AYN C+ST
Sbjct: 870 AFSPTVLDRSLQRSPEWIPLVMEPYSNFYTDPLVILDFQSLYPSLMIAYNYCFSTCFGKV 929
Query: 540 ----------------TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
DA +L + + +PSG FVKS++++GILP ++EE++
Sbjct: 930 QDIIKGSGSIKFGCGDLAVDAEELKRLKDDIIISPSGSVFVKSHIRRGILPRLVEEIINT 989
Query: 584 RKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGR 642
R K +K++ +LD RQL+LK+ AN YG+T A+ G++P +E++ ++ S G+
Sbjct: 990 RFMVKKGMKKSTSKSFNRILDARQLSLKLIANVTYGYTSASFSGRMPLVELADAIVSKGK 1049
Query: 643 QMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGT 702
+ +E KLV TT E AEV+YGDTDS+ + T A K+G + A+ +S
Sbjct: 1050 ESLETAVKLVN---TTA---EWGAEVVYGDTDSMFILLRGKTKSEAFKIGYDIAEKVSAM 1103
Query: 703 FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK-MDTKGIETVRRDNCLLVKNLVT 761
F P+KL+FEKVYYP +L +KKRY G + + ++ + +D KGIE +RRD C + + ++
Sbjct: 1104 FPDPMKLKFEKVYYPGVLETKKRYFGYMYESEDQVEPVLDAKGIELIRRDGCKVQQVILD 1163
Query: 762 ECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHV---E 818
+ + + +D + ++ + + + L + K G Y + + V +
Sbjct: 1164 KAIRTLFDTKDFGAVKKVIQKSFEQIFKGKFGLHRFMFAKEY--NGASYYQQNSCVPVLK 1221
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
+A +++ D P VG+RVPY++ + ++ + P +LE+ Y L
Sbjct: 1222 IARQLKSEDPRAEPLVGERVPYIVTQGWDKSRIIDLVAHPKKLLED-------YRLRPNY 1274
Query: 879 SKPLLRIFEPILKNASKELLSGDH----TRSISISTPSNSGIMKFAKRQLSCIGCKALIS 934
+ +LRI P L A ++ + + + + IS C
Sbjct: 1275 TYYILRIVCPALDRALLKVRTAEWYHELPKVLRISPMKEGARKTMVYEYFDVNRCAVCDK 1334
Query: 935 NGT----LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDV-LCTSRDC 989
+G +C C+ + ++ +++ E + C C + +DV C S +C
Sbjct: 1335 SGQCIDRVCDLCRAKPQVSVFISLEKLRRHEDDLRTVRDLCSRCMMNREEDVNECISINC 1394
Query: 990 PIFYRR 995
P+ +RR
Sbjct: 1395 PVLFRR 1400
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 16/185 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
I+R+FG+ G C +H PY C + D +E + N +SKV +
Sbjct: 48 ILRVFGIESSGKKCCIHIHRIYPYL---CVKFESSPDERRKAAFVESLEKALNAHSKVAR 104
Query: 179 FVRHIEMVQKRSIMYYQQQKSQP-FLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
R +E + +Y ++ FLKI + P + +L+ Q+ G ++ F
Sbjct: 105 H-RIVEATFFKGTNFYGYYANEEVFLKISFSDPRTLKRASEVLNSS-QVLGSAIRVF--- 159
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKY-----RKTAKTLSYCQLEFDCLYSDIISRHP 292
E++ F L+FMID + G N + +GK+ + S CQ+E DC D+++++
Sbjct: 160 EAHTPFPLQFMIDHQLQGMNSLR--IGKFIPRTSDQGPPKQSCCQMEVDCFVEDVLNQYE 217
Query: 293 EGEFS 297
E + +
Sbjct: 218 EQDMN 222
>gi|407918361|gb|EKG11632.1| hypothetical protein MPH_11125 [Macrophomina phaseolina MS6]
Length = 1629
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 161/514 (31%), Positives = 260/514 (50%), Gaps = 33/514 (6%)
Query: 404 VHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLS 463
H + Q+G ++ Y + + +L+ I E AR+ GV ++S
Sbjct: 1061 THQDLTKWYQSGKPRDLAKVVGYFVSRVQINLDILEANEIIPRTSEQARLLGVDFFSVIS 1120
Query: 464 RGQSIKVLSQLLRKAKQKNLVIPNV--KQAGSEQGTYEGATVLEARAGFYEKPIATLDFA 521
RG KV S + R AK +N V+P+ KQ G + V+E ++ FY P+ LDF
Sbjct: 1121 RGSQFKVESLMFRIAKPENFVLPSPSRKQVGQQNALECLPLVMEPQSAFYNSPLLVLDFQ 1180
Query: 522 SLYPSIMMAYNLCYSTLVT----------------PEDARKLNLPPECVNKTPSGETFVK 565
SLYPS+M+AYN CYST + + R L + + +N P+G +VK
Sbjct: 1181 SLYPSVMIAYNYCYSTFLGRITGWRGKNKMGFTDFKREPRLLEIVQDYINVAPNGMMYVK 1240
Query: 566 SNLQKGILPEILEELLAARKRAKADLK-EAKDPLEKAVLDGRQLALKISANSVYGFTGAT 624
++K +L ++L E+L R K+ +K + D + + +L+ RQLALK+ AN YG+T A+
Sbjct: 1241 PEMRKSLLAKMLGEILETRVMVKSGMKVDKDDKMLQQLLNNRQLALKLIANVTYGYTSAS 1300
Query: 625 V-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVP 683
G++PC EI+ S+ GR+ +E L+ +V + AEV+YGDTDS+ V
Sbjct: 1301 FSGRMPCSEIADSIVQTGRETLEKAIALIH----SVKKW--GAEVVYGDTDSLFVYLPGR 1354
Query: 684 TVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDT 742
T + A +G + A ++ +PIKL+FEKVY+P +L++KKRY G Y + + D
Sbjct: 1355 TRDEAFDVGEQIAAAVTARNPRPIKLKFEKVYHPCVLLAKKRYVGFKYESRAQTEPDFDA 1414
Query: 743 KGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKG 802
KG+ETVRRD + + L + +D+ QY ++ + ++ R+ + + +
Sbjct: 1415 KGVETVRRDGTPAEQKIEETALKLLFRTQDLSQVKQYFQNQCAKIMQGRVSIQDFLFARE 1474
Query: 803 LTKTGDDYEVKAAHVELAERMRKR---DAATAPNVGDRVPYVIIKAAKGAKAYERSEDPI 859
+ + G Y K A KR D P G+RVPYV++ A GA+ +R P
Sbjct: 1475 V-RLG-TYSAKGPGPPGALIATKRMLADRRAEPQYGERVPYVVVTGAPGARLIDRCVAPE 1532
Query: 860 YVL-ENNIPIDTHYYLENQISKPLLRIFEPILKN 892
+L ++ + +D YY+ + PL RIF + N
Sbjct: 1533 ALLRDDQLELDAEYYISKNLIPPLERIFNLVGAN 1566
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------N 171
++R FG T G VC +HG PY Y+ + + D + + Q L + A N
Sbjct: 43 VVRAFGATETGQKVCAHIHGALPYLYLEYNESLEQDAVDAYIQRLRISIDHALAVSYRRN 102
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
+FV HI +V+ Y + FLK+ + P ++ +L +G L
Sbjct: 103 AYDGKSRFVAHITLVKGVPFFGY-HVGYKFFLKVYLLNPLNMSRLADLLQQGAIL----A 157
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
K +ES++ + L++M D N+ G +I+ K+R
Sbjct: 158 KVMQPHESHLQYLLQWMCDYNLYGCAYIDCAKVKFR 193
Score = 44.7 bits (104), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 304 ILSFDIECAGRKGHFPEPTHDPV------IQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
I+S ++ R P+P D + +Q + ++Q + K A +
Sbjct: 878 IMSLEVHVNTRGTFLPDPAEDEIACIFWCVQDDDAQSVQIGVLALSSSEGIAKKMARFLD 937
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
VDV E E D+L D +RE DPD++ GY + YLIE+
Sbjct: 938 VDVQYEEDELDLLNKMVDIVREFDPDILTGYEVHNSSWGYLIER 981
>gi|388579508|gb|EIM19831.1| hypothetical protein WALSEDRAFT_58541 [Wallemia sebi CBS 633.66]
Length = 1504
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 176/602 (29%), Positives = 293/602 (48%), Gaps = 46/602 (7%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
+L+ + I E AR GV +++RG KV + + R AK +N V+ P+ Q +
Sbjct: 898 ILNSMETITKTAEFARTIGVDFYSVITRGSQFKVEALMFRIAKPENYVLISPSRNQVSGQ 957
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---VTPED-------- 543
Q V+E ++ FY+ PI LDF SLYPSIM+AYN CYST V P +
Sbjct: 958 QAAEALPLVMEPQSAFYKDPIIVLDFQSLYPSIMLAYNYCYSTCLGRVKPYEGHYKLGIT 1017
Query: 544 -----ARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK-DP 597
++ L+ + +N P+G +VK +++K +L ++L ELL R K ++E + D
Sbjct: 1018 EHTTSSKVLDSLKDDINFAPNGMMYVKPHVRKSLLSKMLAELLDTRIMIKQSMQENREDK 1077
Query: 598 LEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKF 656
+ + RQL+LK+ AN YG+T A+ G++PC+E++ S+ GR+ +E + +++
Sbjct: 1078 YLRKLQHARQLSLKLMANVTYGYTSASFSGRMPCVELADSIVQTGRETLERAIRFIDN-- 1135
Query: 657 TTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYY 716
E A+V+YGDTDS+ V+ T + A + G + A+ ++ + P+KL+ EK+Y
Sbjct: 1136 ----NKEWGADVVYGDTDSLFVRLKGKTQQEAFETGADIAEAVTKSNPHPVKLKLEKMYL 1191
Query: 717 PYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPG 775
P +L++KKRY G ++ ++ + KGIETVRRD +V L + D+
Sbjct: 1192 PSVLLAKKRYTGNMFERVTDEVGIFEAKGIETVRRDGIPAQSKMVETALKVLYKTSDLSQ 1251
Query: 776 AVQYVKSTISDLLMNRMDLSLLVITKGLTKTGD--DYEVKAAHVELAERMRKRDAATAPN 833
Y + ++ R+ + K + + G + V V +A + D +
Sbjct: 1252 VKSYCVKQFNKVIQGRVSIKDFTFAKEV-RLGSYAPHAVPIPGVMVATKSLTDDPRATAH 1310
Query: 834 VGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKN 892
G+RVPYVI + + +R+ P +L N N+ +D YY+E + PL RIF L
Sbjct: 1311 YGERVPYVITE-GNSDRQVDRAVKPEEMLSNSNLHLDAKYYIEKVLIPPLERIFN--LMG 1367
Query: 893 ASKELLSGDHTRSIS------ISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGRE 946
A +R + G++ R +C C IS +C+ C G
Sbjct: 1368 ADVHSWYATMSRKFKPEARKPFAITRKGGVIGNYVRSGTCETC-GEISKEPVCTDCLGDS 1426
Query: 947 --AELYCKTVSQVQELEVLFGRLWTQCQECQGSLH--QDVLCTSRDCPIFYRRKKAQKDM 1002
++ K +S+ + + T C C +H QDV C + DC + Y+R + Q D+
Sbjct: 1427 NVSDTMYKLLSKKYRTTLKMRDIQTICSSC-AHVHPSQDVPCVNLDCEVLYKRSQNQCDI 1485
Query: 1003 AE 1004
E
Sbjct: 1486 DE 1487
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 110 LPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDI-SHFHQI------ 162
LPL++ + I+R+FG G C VHG PYFYI + P+ + + HQ+
Sbjct: 29 LPLAN--SPILRVFGRLDTGQMACAHVHGVYPYFYIEYKHSVTPEKVRDYIHQLGLSINQ 86
Query: 163 ---LEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGI 219
L R R N QF+R I ++ K + Y ++PFLKI++ P + +
Sbjct: 87 SLSLSLR-RNMNDKQSTTQFLRAI-VICKGTPFYGYNVGTRPFLKIIMNDPKHIPRLVQL 144
Query: 220 LDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
++ G L +F YES+ + L+F D N+ G +W++V K+R
Sbjct: 145 MESG----QLMNTTFQAYESHAPYLLQFFTDYNLYGCDWMQVSQAKFR 188
>gi|38683665|gb|AAR26842.1| FirrV-1-A18 [Feldmannia irregularis virus a]
Length = 1013
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 160/442 (36%), Positives = 246/442 (55%), Gaps = 23/442 (5%)
Query: 400 EKEDVHHS-IISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPI 458
EK+DV + II ++ + E ++A YCL+D++L +L+ L ++N +EM+++ VP+
Sbjct: 366 EKDDVSYGYIIQACKSKDPEALGKIAKYCLQDSWLTLKLVSFLKDVYNGLEMSKLCVVPL 425
Query: 459 SFLLSRGQSIKVLSQLL-RKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFY-EKPIA 516
F+ SRGQ IK LS +L R + L + +Q ++GATV+ A+ GF+ + P+
Sbjct: 426 RFIESRGQQIKCLSLILDRIHSEYVLNRSRALEQQDQQCKFQGATVISAKKGFHCDDPVV 485
Query: 517 TLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG--ETFVKSNLQKGILP 574
LDFASLYPSI+ NLCY+T V ++ ++ + +G ETF + + GIL
Sbjct: 486 CLDFASLYPSIIRWKNLCYTTHVDSDEFLDIDGVDYEKFEVSAGVYETFARRPGRPGILA 545
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
I E+L ARK K +K DP +L+ +QLA KI+ NS+YGF G G LP + I+
Sbjct: 546 MIEEDLGEARKLTKRRMKSETDPTLLQLLNSKQLAQKITMNSLYGFCGTVRGCLPLVAIA 605
Query: 635 SSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGV----------PT 684
++VT+ GR MI+ T + + V VIYGDTDSVM F V
Sbjct: 606 AAVTATGRFMIKRTADFIRNDMKGV--------VIYGDTDSVMCTFPVEQSVRDQGNKAL 657
Query: 685 VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKG 744
+E A + G +A F P+KLE+EK+Y+P+LL+SKKRYA + + P+ K+ T G
Sbjct: 658 LEHAYEKGLQAEQQSLELFGHPVKLEYEKMYFPFLLLSKKRYASMCYETPDTAPKITTSG 717
Query: 745 IETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT 804
+ TVRRDN +V++ E + ++ + V+YV S + + +DL +L I+ L
Sbjct: 718 LVTVRRDNAKIVRDCANEVIRILMERQGADNVVKYVDSVLRAMDDGTLDLEMLTISNELK 777
Query: 805 KTGDDYEVKAAHVELAERMRKR 826
K + Y +AH LA + R R
Sbjct: 778 KHPEQYSTPSAHSVLAGKRRYR 799
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 126/292 (43%), Gaps = 37/292 (12%)
Query: 117 AAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKV 176
+++RIF VT++G +V F P+FYI G D+ F +E N
Sbjct: 28 VSVVRIFAVTQKGEPTYVEVKNFRPWFYIDLVGGTTFDE---FKVRVENEFWFRN----- 79
Query: 177 PQFVRHIEMVQKRSIMYYQQQKSQPFLKI-VVALPTMVASCRGILDRGIQLDGLGMKSFM 235
V E+V+K+ + + + ++++ L M + + + D F
Sbjct: 80 ---VVSCEVVRKKRFIGFSDDRVFDYVQVKFTGLVPMYTARKALRD-----------GFR 125
Query: 236 TYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRH-PEG 294
YE ++ L+F + ++ E+ T + ++C LE+ + +I RH +
Sbjct: 126 IYEDHIDPLLKFFHSSGVRPSSYFEIQ-DFTTWTGQGKTHCSLEYYVVAENI--RHCVDL 182
Query: 295 EFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGE---KQPFIRN--VMTL 349
+ + P + ++DIE +G +PT D V QV+ GE + + + V+ +
Sbjct: 183 DGAPPPPMPMCAYDIESSG-----LDPTSDYVFQVSMCFGYLGEDVGARTAVSDSVVVCV 237
Query: 350 KSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
+ V+ + E ++L +RD I + +++GYN +FD +L ++
Sbjct: 238 GQTTSLQDTPVLCVDNEYELLKKFRDLIIQRQICILVGYNSYQFDGQFLYKR 289
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 832 PNVGDRVPYVIIKAAKGAKAYERSEDPIYV-LENNIPIDTHYYLENQISKPLLRIFE 887
P +G RVPYVI++ KG+ ERSEDP YV + I +DT YY++ Q+ +P++ + E
Sbjct: 915 PGLGTRVPYVIVRG-KGS-VNERSEDPTYVKIAGEIRVDTKYYVDQQLRRPIMGMVE 969
>gi|88604876|gb|ABD46758.1| REV3 [Neurospora crassa]
Length = 1926
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 252/493 (51%), Gaps = 32/493 (6%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L +LDK I E AR+ GV + SRG KV S + R AK +N ++
Sbjct: 1144 YYLTRTRLDIEILDKNELIPRTSEHARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1203
Query: 486 PNV--KQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1204 PSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIV 1263
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L + +N P+G + K +++K +L ++L E+L R
Sbjct: 1264 SWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMV 1323
Query: 588 KADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K+ +K+ KD + +L+ R LALK+ AN YG+T A+ G++PC EI+ S+ GR+ +
Sbjct: 1324 KSGMKQDKDDRAIQPLLNNRPLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETL 1383
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E + +V + +A+V+YGDTDS+ V T E A ++G+E AD ++ +
Sbjct: 1384 ERAIAFIH----SVQKW--DADVVYGDTDSLFVSLKGRTREQAFEIGQEIADAVTKLNPR 1437
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + + D KGIETVRRD + + + L
Sbjct: 1438 PVKLKFEKVYHPCILLAKKRYVGYKYESRDQTVPVFDAKGIETVRRDGTPAEQRIEEKAL 1497
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVELA 820
+ D+ Y + ++ + + + G T A +A
Sbjct: 1498 KILFETADLSQVKSYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGALIA 1557
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQIS 879
+ K DA P G+RVPYV++ A G + +R +P +L N + +D YY+ I
Sbjct: 1558 TKKMKEDARAEPQYGERVPYVVMAGAPGLRLVDRCVEPEELLNNAHATLDADYYINKNII 1617
Query: 880 KPLLRIFEPILKN 892
PL RIF + N
Sbjct: 1618 PPLERIFNLVGAN 1630
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
+ +IR+FG T +G VC +HG PY Y+ + P+ H + ++ R+
Sbjct: 37 AAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDGDLEPNKD---HALAISYRKDPIRD 93
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
P++V I + K + Y + +LKI + P +++ +L G+ + +
Sbjct: 94 R--PKYVARISLT-KGTPFYGFYVGYRFYLKIYLFNPVVMSRLVDLLQHGVIMS----RK 146
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F YE+++ + L+FM D N+ G N+++ + +R
Sbjct: 147 FQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFR 180
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L ++V E + + CQ C G +L ++V C S+DCP+FY R
Sbjct: 1759 LCHRCASDPPTLMVDMQAKVNRAEKSYVEIMKVCQSCAGFALSEEVSCDSKDCPVFYSRV 1818
Query: 997 KAQKDMAEAK 1006
K + + K
Sbjct: 1819 KQRTKVTAVK 1828
>gi|44491717|gb|AAS47471.1| DNA polymerase [Murid herpesvirus 4]
Length = 1097
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/568 (29%), Positives = 271/568 (47%), Gaps = 90/568 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV---------------------------KQAG 492
++ GQ I++ + LL + +++++PN+
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHEAAAAIEEAAAGGEGDETSEGENSNN 597
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DAR 545
S Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D
Sbjct: 598 SRTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVL 657
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDG 605
++ + +C FV+ N+ + +L E+L L RK + + + + +++ ++D
Sbjct: 658 RVEIGDQC-------HRFVRENVHRSLLAELLVRWLTQRKLVREAMNQCTNEMQRMIMDK 710
Query: 606 RQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTV 659
+QLALK++ N+ YGFTG G LPC+ I++S+T GR M+ T +ED+ TV
Sbjct: 711 QQLALKVTCNAFYGFTGVAAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTV 770
Query: 660 GGYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLE 710
G A ++IYGDTDSV F EA +K +G AA+ + F + ++LE
Sbjct: 771 LGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKERVRLE 830
Query: 711 FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
FEK++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D
Sbjct: 831 FEKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFND 886
Query: 771 RDIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA-------------- 815
+ G ++ + T DL N + + L + DD +K
Sbjct: 887 ETVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQE 946
Query: 816 ----------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVL 862
H+ + R+ R P VGDRV YV+ K YE +EDP +V+
Sbjct: 947 LSCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVV 1005
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPIL 890
E + I+ Y E Q+ K + P+
Sbjct: 1006 EAKLSINAEKYYE-QVVKAVTNTLMPVF 1032
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 149/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ DS+ ++ P + +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADSDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|327305973|ref|XP_003237678.1| hypothetical protein TERG_08729 [Trichophyton rubrum CBS 118892]
gi|326460676|gb|EGD86129.1| hypothetical protein TERG_08729 [Trichophyton rubrum CBS 118892]
Length = 1699
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 176/561 (31%), Positives = 280/561 (49%), Gaps = 56/561 (9%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
+LD I E AR+ G+ + SRG KV S + R AK +N ++ P+ KQ G +
Sbjct: 956 ILDANELISRTSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFILISPSRKQVGQQ 1015
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LVTPEDARK---- 546
V+E ++ FY P+ LDF SLYPSIM+AYN CYST +V K
Sbjct: 1016 NALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWRGRNKMGIT 1075
Query: 547 --------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKD-- 596
L L + +N P+G + K ++K +L ++L E+L R K +KE KD
Sbjct: 1076 DYEREPGLLGLLKDKINIAPNGIIYAKQEVRKSLLAKMLTEILETRVMVKNGMKEDKDDR 1135
Query: 597 PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDK 655
PL++ +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +E L+
Sbjct: 1136 PLQR-LLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTARETLEKAIALIH-- 1192
Query: 656 FTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
+V + AEV+YGDTDS+ + T A LG E A I+ + +P+KL+FEKVY
Sbjct: 1193 --SVKRW--GAEVVYGDTDSLFIYLKGRTRAEAFDLGEEIAKTITDSNPRPVKLKFEKVY 1248
Query: 716 YPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP 774
+P +L++KKRY G Y + ++ + D KGIETVRRD + + + L + D+
Sbjct: 1249 HPCVLLAKKRYVGYKYESKNQEKPEFDAKGIETVRRDGTPAEQKIEEKALRLLFETSDLS 1308
Query: 775 GAVQYVKSTISDLLMNRMDLSLLVITK--GLTKTGDDYEVKAAHVELAERMRKRDAATAP 832
+Y + S ++ ++ + K L D + A+RM + D P
Sbjct: 1309 RVKEYFQKQCSKIMRGKVSVQDFCFAKEVKLGTYSDKGAPPPGALISAKRMLE-DPKLEP 1367
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILK 891
G+RVPYV++ A GA+ +R P +L++ + +D YY+ + PL RIF +
Sbjct: 1368 QYGERVPYVVVSGAPGARLIDRCFPPEVLLQDPQLELDAEYYISKNLIPPLERIFNLVGA 1427
Query: 892 NASK---ELLSGDHTRSI--SISTPS-------NSGIMKFA----KRQLSCIGCKALIS- 934
N + E+ R +++TP+ N+ + K R SC+ C++ ++
Sbjct: 1428 NVRQWYDEMPKYQRMRRTEGALNTPAGRSGQDGNNAMFKKTLECYMRSSSCVVCRSKLNS 1487
Query: 935 ------NGTLCSHCKGREAEL 949
N +C+ C ++ L
Sbjct: 1488 EEQRQQNQAICNVCLRQQPHL 1508
>gi|12656288|gb|AAK00812.1| DNA polymerase [unidentified herpesvirus]
Length = 1005
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 263/519 (50%), Gaps = 49/519 (9%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R R+ YC+ D+ L LL M E+A++ +P
Sbjct: 463 QKEDVTYKEIPVLFRSGQAGRARVGSYCVLDSVLVLDLLKYFMIHVEISEIAKMAKIPAR 522
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A+++N ++P + G Y+GATV+ GFY PI +D
Sbjct: 523 RVLTDGQQIRVFSCLLEAARKENFILP--IPGRDKTGGYQGATVINPIPGFYNTPILVVD 580
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP---ECVNKTPSGETFVKSNLQKGILPEI 576
FASLYPSI+ A+NLCYST++ ++ +L P E + FVK + K +L +
Sbjct: 581 FASLYPSIIQAHNLCYSTMIQDQNLHLHHLKPDDYETFQLSTGPIHFVKQHKIKSLLSTL 640
Query: 577 LEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSS 636
L LA RK + +L +D K +LD +QLA+K++ NSVYGFTG G LPCI+I+ +
Sbjct: 641 LTAWLAKRKAIRKELAHCEDGPLKTILDKQQLAIKVTCNSVYGFTGVASGMLPCIQIAET 700
Query: 637 VTSYGRQMIEHTKKLVE----DKFTTVGGY------EHNAEVIYGDTDSVMVQF-GVPTV 685
VT GR M+E +K VE ++ + + + + + VIYGDTDS+ ++ G P
Sbjct: 701 VTLQGRTMLERSKAFVEMITPERLSDIISHPVPCEPDASFRVIYGDTDSLFIECRGYPIQ 760
Query: 686 EAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGI 745
+ F PIKLE EK + L+++KKRY G+ + DK+ KG+
Sbjct: 761 SVVEFADKLTETTTKTLFKDPIKLEAEKTFQCLLMLTKKRYIGILSS-----DKLVMKGV 815
Query: 746 ETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQY------------------------VK 781
+ +R+ C V++ E L +L D D+ A QY +
Sbjct: 816 DLIRKTACRFVQSTSKEILDLVLRDPDVKQAAQYLCGQRPAMVYSSGLPVGFFKVIDILN 875
Query: 782 STISDLLMNRMDLSLLVITKGLTKTGDDYEVKA-AHVELAERMRKRDAATAPNVGDRVPY 840
S+ + L + + L + L++ +Y+ H+ + +++ R+ P + DR+PY
Sbjct: 876 SSYAALASGGVAVEDLTFSTELSRPIGEYKTTTLPHLMVYKKIMSRNEE-LPQIHDRIPY 934
Query: 841 VIIKA-AKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
V +K +G K+ + +EDP YV +N IPI Y + I
Sbjct: 935 VFVKGDLRGCKS-DLAEDPDYVKQNKIPISVDIYFDKLI 972
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 176/387 (45%), Gaps = 52/387 (13%)
Query: 28 TPTTP-VIDDEFLDEDVFLDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVS 86
TP TP VI LD V L +D+E I + ++ + + L +PP S G V
Sbjct: 40 TPNTPGVISITTLDTPV-----LFFKDKEYSIFTSSDHQKSYWTSL----KPP-SRG-VF 88
Query: 87 QCQSIMFQQLDIDYVIGDSNR----------ELLPLSSGSAAIIRIFGVTREGHSVCCKV 136
Q + F DI + S+R +++P + ++++ G TR+G SVC V
Sbjct: 89 QGGELFFHVYDIIETVYTSDRCVDIPVQFQTDIIP----NGTVLKLLGKTRDGVSVCVNV 144
Query: 137 HGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQ 196
YFY+ P+ + I Q L G + + + Q +++ I+
Sbjct: 145 FQQMVYFYVRVPEDVNLSYI--IQQTLNGGINKQTCKFNITQ--------ERKKILREYD 194
Query: 197 QKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGG 256
P KI ++ T D ++ L +E+NV + RF+ID
Sbjct: 195 PSLYPVYKITLSSST---------DINQLVESLTSCGCDVFEANVSASTRFIIDNKFSTF 245
Query: 257 NWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKG 316
W +++T++ + LEFDC D+ HP GE + P+ I+SFDIEC G +G
Sbjct: 246 GWYSCS-NPHQRTSQRDARTDLEFDCGLGDL-QFHP-GE-QQWPPYTIMSFDIECIGEQG 301
Query: 317 HFPEPTHDP--VIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWR 374
FP T D VIQ++ ++ G P +++L +C PI DV F +E D+ A+
Sbjct: 302 -FPCATRDEDLVIQISCILWTVGLDVPPRNILLSLGTCDPIDNTDVYEFPSELDMFYAFF 360
Query: 375 DFIREVDPDVMIGYNICKFDLPYLIEK 401
IR+ D D + GYNI FD PY+I++
Sbjct: 361 TMIRDHDIDFVTGYNIANFDFPYIIDR 387
>gi|24586371|ref|NP_524881.2| mutagen-sensitive 205 [Drosophila melanogaster]
gi|11096179|gb|AAG30224.1| DNA polymerase zeta catalytic subunit [Drosophila melanogaster]
gi|21627721|gb|AAF59191.2| mutagen-sensitive 205 [Drosophila melanogaster]
Length = 2130
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 187/605 (30%), Positives = 285/605 (47%), Gaps = 55/605 (9%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGSEQGTYEGATVLEA 506
EMA++ G+ +LSRG +V S +LR AK KNLV P+V+ + A ++E
Sbjct: 1534 EMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQARAHMRAPEYLALIMEP 1593
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---------------------VTPEDAR 545
++ FY P+ LDF SLYPS+++AYN C+ST V+ + +
Sbjct: 1594 QSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQMLQ 1653
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLD 604
KL L + V +P G FVK +++GILP +L E+L R+ K +K KD + +L
Sbjct: 1654 KL-LEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHKDSSALQRILH 1712
Query: 605 GRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYE 663
RQL LK+ AN YG+T A G++P +E+ SV S GR+ +E KLVE+ E
Sbjct: 1713 SRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSVVSKGRETLERAIKLVEN------NEE 1766
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISK 723
V+YGDTDS+ V A ++G E A ++ +P+KL+ EKVY P +L +K
Sbjct: 1767 WKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAKAVTEMNPQPVKLKLEKVYQPCMLQTK 1826
Query: 724 KRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS 782
KRY G +Y T ++ + KGIETVRRD C V ++ + L + +D+ YV
Sbjct: 1827 KRYVGYMYETADQEQPVYEAKGIETVRRDGCPAVAKMLEKVLRILFETQDVSKIKAYVCR 1886
Query: 783 TISDLLMNRMDLSLLVITK---GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVP 839
+ LL R +L L+ K GL V A +EL + ++D P G+RVP
Sbjct: 1887 QFTKLLSGRANLQDLIFAKEFRGLNGYKPTACVPA--LELTRKWMQKDPRHVPRRGERVP 1944
Query: 840 YVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNAS---- 894
++I+ G + P +L N I+ YY+ I PL R I N
Sbjct: 1945 FIIVNGPPGMQLIRLVRSPHDILANEGHKINAIYYITKAIIPPLNRCLLLIGANVHDWFA 2004
Query: 895 ---KELL---SGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAE 948
++LL + ++ + + S I ++ I C G +C C
Sbjct: 2005 SLPRKLLMTPAVGTANELAGARGAKSTISQYFSTTSCVIDCGRQTKAG-ICPDCLKNATT 2063
Query: 949 LYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQ 1008
+ LE + CQ C G L + C S DCP+ Y + ++++ Q
Sbjct: 2064 CVVVLSDKTARLERGYQLTRQICQACCGRLG-SLQCDSLDCPVLYVLEGKRRELQ----Q 2118
Query: 1009 LDRWN 1013
++ WN
Sbjct: 2119 IEHWN 2123
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------- 170
+IR+FG G C VHG PY YI P D F + G ++ A
Sbjct: 47 VIRVFGGNSRGQKTCMHVHGVFPYLYI-------PYDKKDFESLERGILQMAMHLDKAIN 99
Query: 171 ---NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
+ S Q V I++V+ Y + + Q FLKI + P V +L G L
Sbjct: 100 ISLGQGSSNAQHVFKIQLVKGIPFYGYHRVEHQ-FLKIYMFNPRFVRRAANLLQSGAILS 158
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP--VGKYRKT 269
K+F +ES+V + L+FMID N+ G +++ VP V K+R+
Sbjct: 159 ----KNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRN 198
>gi|116193749|ref|XP_001222687.1| hypothetical protein CHGG_06592 [Chaetomium globosum CBS 148.51]
gi|88182505|gb|EAQ89973.1| hypothetical protein CHGG_06592 [Chaetomium globosum CBS 148.51]
Length = 1755
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 187/612 (30%), Positives = 299/612 (48%), Gaps = 47/612 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS--IISDLQ-NGNAETRR 421
T R ++ WR E++ ++ Y++ + +L+ + H+S ++D +G
Sbjct: 1027 TGRHIINVWRAMRGELN---LLQYSMENV-VWHLLHRRIPHYSWQTLTDWYLSGRPRDLS 1082
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
++ Y L+ L +++ I E AR+ GV + SRG KV S + R AK +
Sbjct: 1083 KVLRYYLRRTRLDIEIIEANELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPE 1142
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-- 537
N LV PN KQ GS+ V+E ++ FY P+ LDF SLYPS+M+AYN CYST
Sbjct: 1143 NFLLVSPNRKQVGSQNALECLPLVMEPQSAFYPSPLLVLDFQSLYPSVMIAYNYCYSTCL 1202
Query: 538 --LVTPEDARKLNLP------------PECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
+V+ K+ + +N P+G + K ++K +L ++L E+L
Sbjct: 1203 GRVVSWRGTNKMGFTEYRRREGLLRLLKDHINIAPNGMMYTKPEIRKSLLAKMLTEILET 1262
Query: 584 RKRAKADLKEAKD--PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
R K+ +KE KD L+K +L RQLALK+ AN YG+T A+ G++PC EI+ S+
Sbjct: 1263 RVMVKSGMKEDKDDKTLQK-LLHNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQT 1321
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
R+ +E + +V + AEV+YGDTDS+ V T E A +G E A I+
Sbjct: 1322 SRETLERAIAYIH----SVERW--GAEVVYGDTDSLFVYLKGRTREQAFDIGAEMAKEIT 1375
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNL 759
+P+KL+FEKVY+P +L++KKRY G Y + + + D KGIETVRRD + +
Sbjct: 1376 DLNPRPVKLKFEKVYHPCVLLAKKRYVGYKYESRDQTVPEFDAKGIETVRRDGTPAEQKI 1435
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA---AH 816
+ L + D+ +Y +S S ++ + + + K + K G Y K
Sbjct: 1436 EEKALKILFETADLSQVKEYFQSQCSRIMRGAVSIQDFLFAKEI-KLG-SYSGKGPGPPG 1493
Query: 817 VELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLE 875
++ R DA P G+RVPYV++ A GA+ +R P +L + + +D YY+
Sbjct: 1494 ALISTRRMLEDARAEPQYGERVPYVVVSGAPGARLIDRCVAPEDLLNDPHASLDAEYYIS 1553
Query: 876 NQISKPLLRIFEPILKNASK---ELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKAL 932
+ PL RIF + N E+ R + +++ + + +M + K L
Sbjct: 1554 KNLIPPLERIFNLVGANVRAWYDEMPKVQQVRRLEMTSAAVATVMPNNGNNNNATAKKTL 1613
Query: 933 --ISNGTLCSHC 942
N T C C
Sbjct: 1614 EFFLNSTSCLVC 1625
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------N 171
+IR+FG T G VC VHG PY YI + +S + L + A +
Sbjct: 42 VIRVFGSTETGQKVCAHVHGAFPYLYIEYRGPLDKPTVSEYIYALHLSIDRALAINYRRD 101
Query: 172 RNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
+ + +FV + +V K Y + +LKI + P ++ +L L GL M
Sbjct: 102 QRREPQRFVARVTLV-KGVPFYGFHVGYRYYLKIYMLNPVVMTRLADLL-----LQGLVM 155
Query: 232 -KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ F YE+++ + L+FM D N+ G ++++ ++R
Sbjct: 156 GQKFQPYEAHLQYLLQFMADYNLYGCDYLDAEDVRFR 192
>gi|358055684|dbj|GAA98029.1| hypothetical protein E5Q_04709 [Mixia osmundae IAM 14324]
Length = 1838
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 190/665 (28%), Positives = 298/665 (44%), Gaps = 42/665 (6%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED--VHHSIISDLQNGNAETRRR 422
T R VL WR E+ + Y + L E+ H ++ + + R
Sbjct: 1169 TGRHVLCIWRILRGEL---ALTQYTLENLTFHVLQERTPHYTHRTLTRWYTDDSPAHTAR 1225
Query: 423 LAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKN 482
+ Y L+ A + LLD+ I E ARV GV +L+RG KV S + R AK ++
Sbjct: 1226 VLQYWLRRASIDIELLDEAEIISRNAEFARVFGVDFMSVLTRGSQFKVESFMFRVAKPES 1285
Query: 483 LVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV- 539
++ P+ Q G + ++E ++ FY P+ LDF SLYPS M+AYN CYST +
Sbjct: 1286 FLLLSPDRVQVGKQNAAECQPLIMEPQSAFYTDPVLVLDFQSLYPSCMIAYNYCYSTCLG 1345
Query: 540 --------TPEDARKLNLPPECVN-------KTPSGETFVKSNLQKGILPEILEELLAAR 584
T L+ P ++ +P+G FVK +++K +L ++L E+L R
Sbjct: 1346 RAGLFKNTTKFGTTTLDHPAGLLSLLQDELIVSPNGFVFVKPHVRKSLLSKMLSEILDTR 1405
Query: 585 KRAKADLKEAKDPLEKAV---LDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSY 640
K +K KD +KA+ ++ RQL LK AN YG+ AT G++PC+EI+ ++
Sbjct: 1406 FMIKKSMKLVKD--DKALTKMMNARQLGLKFIANVTYGYCSATFSGRMPCVEIADAIVQT 1463
Query: 641 GRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYIS 700
GR+ +E + A V+YGDTDS+ V T + A ++GRE A I+
Sbjct: 1464 GRETLERAMSTIH------ANAAWGARVVYGDTDSLFVHLPGKTKDDAFRIGREIAATIT 1517
Query: 701 GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNL 759
+P++L+FEKVY P +L +KKRY G + N E + + D KGIETVRRD +
Sbjct: 1518 YQNPRPVELKFEKVYLPCVLQAKKRYVGFKYENEEDEEPVFDAKGIETVRRDGIPAQAKM 1577
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK--GLTKTGDDYEVKAAHV 817
V L + D+ +Y LL R+ + K L D V
Sbjct: 1578 VESSLKILFRTHDLSQVKEYCCRQWQRLLDGRVSIQDFTFAKEVKLGSYSDKGIPPPGPV 1637
Query: 818 ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQ 877
A +MRK D P +RVPYV+ + +++ ++ +D YY+
Sbjct: 1638 VAAVKMRK-DHRNEPQYAERVPYVMPISDGRTQSHRALAPEAFLSGRRKRLDAEYYITRM 1696
Query: 878 ISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLS--CIGCKALISN 935
L RIF + + + S T +S T G + +S C C+
Sbjct: 1697 FVPALARIFNLVGVDVNAWYTSMPKTLRLSTKTDQAKGKQTMEEHFVSDRCPICRRPGHR 1756
Query: 936 GTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVL-CTSRDCPIFYR 994
+C+ C+ ++ + +S+ E L C C +V+ C S DCP +Y
Sbjct: 1757 NGVCAACRADPSKTTFEVLSRAHHAEKRQVELRQFCGSCASLPQAEVIECDSLDCPTYYA 1816
Query: 995 RKKAQ 999
R +++
Sbjct: 1817 RLRSE 1821
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRM----------RE 169
IR+FG T +G C VHG PY +I + P+ ++ + + L GR RE
Sbjct: 72 IRVFGSTDQGQRCCVHVHGVFPYVFIQYSGELDPEIVNSYIRQL-GRTLNAAMAKSFKRE 130
Query: 170 ANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGI----- 224
+R + Q+V I +V K Y Q FLKI P + IL G
Sbjct: 131 QDRKVQ-EQYVGFICLV-KGVPFYGFHIGQQYFLKIYCLQPRHMTRLSAILRSGKIMSKP 188
Query: 225 --QLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ G + F +E+++ F L+FM+D N+ G +WI++ K+R
Sbjct: 189 ADKASGAKSQGFEVFEAHIPFLLQFMLDHNLYGCDWIDLERCKFR 233
>gi|44491713|gb|AAS47469.1| DNA polymerase [Murid herpesvirus 4]
Length = 1097
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 168/568 (29%), Positives = 272/568 (47%), Gaps = 90/568 (15%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I + E R R+ YCL+DA L + L + L F F +AR+ +P+
Sbjct: 478 KKDDLSYKEIPVQFSAGDEGRARVGKYCLQDAVLVRELFEMLAFHFEAAAIARLARIPLR 537
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNV---------------------------KQAG 492
++ GQ I++ + LL + +++++PN+
Sbjct: 538 KVIFDGQQIRIYTCLLEECSGRDMILPNMPSLGHEAAAAIEEAAAGGEGDETSEGENSNN 597
Query: 493 SEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---TPE----DAR 545
S Y+GATVLE GF+ P+ DFASLYPSI+M+ NLCYSTL+ +PE D
Sbjct: 598 SRTVGYQGATVLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLLVEGSPEVPEKDVL 657
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDG 605
++ + +C FV+ N+ + ++ E+L L RK + +K+ + +++ ++D
Sbjct: 658 RVEIGDQC-------HRFVRENVHRSLVAELLVRWLTQRKLVREAMKQCTNEMQRMIMDK 710
Query: 606 RQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDK------FTTV 659
+QLALK++ N+ YGFTG G L C+ I++S+T GR M+ T +ED+ TV
Sbjct: 711 QQLALKVTCNAFYGFTGVAAGMLSCLPIAASITKIGRDMLLATAGHIEDRCNRPDFLRTV 770
Query: 660 GGYEHNA--------EVIYGDTDSVMVQFGVPTVEAAMK-LGREAADYISGTFIKPIKLE 710
G A ++IYGDTDSV F EA +K +G AA+ + F +P++LE
Sbjct: 771 LGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEPVRLE 830
Query: 711 FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVD 770
FEK++ ++I KKRY G + + KG++ VRR C VK +V++ LH + D
Sbjct: 831 FEKMFVSLMMICKKRYIGKVHGS----QNLSMKGVDLVRRTACGFVKAVVSDVLHMVFND 886
Query: 771 RDIP-GAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA-------------- 815
+ G ++ + T DL N + + L + DD +K
Sbjct: 887 ETVSEGTMKLSRMTFDDLKKNGIPCEFGPVVSRLCRARDDLHLKKVPVPELTLSSVLSQE 946
Query: 816 ----------HVELAERMRKRDAATAPNVGDRVPYVII---KAAKGAKAYERSEDPIYVL 862
H+ + R+ R P VGDRV YV+ K YE +EDP +V+
Sbjct: 947 LSCYKQKNLPHLAVIRRLAARKEEL-PAVGDRVEYVLTLPDGCKKNVPNYEIAEDPRHVV 1005
Query: 863 ENNIPIDTHYYLENQISKPLLRIFEPIL 890
E + I+ Y + Q+ K + P+
Sbjct: 1006 EAKLSINAEKYYQ-QVVKAVTNTLMPVF 1032
Score = 96.3 bits (238), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 148/359 (41%), Gaps = 58/359 (16%)
Query: 71 RLAKWARPPLSSGYVSQCQSIMFQQLD--IDYVIGDSNRELLPLSSG----SAAIIRIFG 124
R W R P S + F D ++ V+ D + ++ P + +IR+FG
Sbjct: 77 RTRGWCRGPYS-------DELRFHTYDQVVNLVLADYDEQISPRWKHHVVPAGNVIRMFG 129
Query: 125 VTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ----FV 180
T EG SVC V G + YFY C + D + + I + KVP+ F
Sbjct: 130 ATDEGVSVCVNVFGQKAYFY--CERMQSEDLKNTVYDIAD----------KVPEPCSPFS 177
Query: 181 RHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESN 240
I V K S Y ++ M CR I R ++ + YE
Sbjct: 178 VSISPVTKSSFYGYGLGHIPNLYRLSFNNWNM---CRKIGKRMLE------EGRKVYELG 228
Query: 241 VLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMA 300
V RF+ID I W R A +S QLE DC +DI+ P E S
Sbjct: 229 VDPLARFLIDRKIPSFGWCLARRYSVR-AAGYVSRAQLEIDCDVADIL---PIEEQSNWP 284
Query: 301 PFRILSFDIECAGRKGHFP--EPTHDPVIQVANLVTLQGE------------KQPFI--R 344
+R LSFDIEC G FP E D +IQ++ + GE P +
Sbjct: 285 FYRCLSFDIECMSGTGAFPAAENVDDIIIQISCVCFGVGEMVHHAYDVHADLSTPAVPEN 344
Query: 345 NVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKED 403
++ T+ CAPI V + +F +E ++L + F+ P+ + GYNI FD+ Y++ + +
Sbjct: 345 HLFTIGPCAPIPDVKIYTFPSEYEMLRGFFIFLSWYSPEFITGYNINGFDIKYILTRAE 403
>gi|307110758|gb|EFN58993.1| hypothetical protein CHLNCDRAFT_137624 [Chlorella variabilis]
Length = 1327
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 197/692 (28%), Positives = 307/692 (44%), Gaps = 140/692 (20%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQ- 495
LL +L + VE+AR TG+ + + Q ++ S LLR A+++ ++P +++ S Q
Sbjct: 661 LLHRLATLQEMVELARATGLTLQQAVYNAQMVRTNSLLLRTARRQRFLVPGRQESQSLQE 720
Query: 496 ----------------------------------GTYEGATVL-----------EARAGF 510
G E L G
Sbjct: 721 HTFIMHPVSYQAQIVRSWSLVLRTAARHRPGLVVGGRENPMALSESPFLLHPVEHGTVGL 780
Query: 511 YEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQK 570
Y +P+A LDFASLYPSI A+NLCYSTLV +D G FVK ++++
Sbjct: 781 YRQPVAILDFASLYPSIYRAHNLCYSTLVHKDDV---------------GAAFVKPSVRQ 825
Query: 571 GILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPC 630
GILP IL L+ AR + LK A DP +AVLD RQ ALK++AN++YGFTGA L C
Sbjct: 826 GILPGILAALIVARGATRELLKAASDPAARAVLDSRQKALKVTANALYGFTGAGASPLQC 885
Query: 631 IEISSSVTSYGRQMIEHTKKLVEDKFTTVGG-----YEHNAEVIYGDTDSVMVQFG-VPT 684
I+++ S +YG Q K+++E GG Y A VIYG TDS+ V
Sbjct: 886 IQLADSCLAYGAQSCRRAKEVLE---AAAGGGELAPYGSGARVIYGHTDSLFVLLPEAAD 942
Query: 685 VEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDK---MD 741
+ A+ GR A+ +S F P+ L+FE+V P+LL+ RYAG + E + +
Sbjct: 943 AKQAIAAGRLASRVVSAAFPDPMDLKFERVCLPFLLLHVNRYAGRAFERDEDVGRGGELI 1002
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK 801
KG++++ R +++ + L +IL+ D+ GA+++V + LL +++LS LV+T
Sbjct: 1003 CKGVKSMWRQTAPILRTTLHGALVRILMQDDVRGALEFVCGQVRRLLSGQVELSELVMTG 1062
Query: 802 GLTK-TGDDYE---------------VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKA 845
GL + TG E VK H LA R+ +RD A +G R+PYV++
Sbjct: 1063 GLWRVTGQQVENAAAAAGEGGPSPEDVKGPHASLAVRLSQRDPGRAFVLGQRLPYVLLAG 1122
Query: 846 AKGAKAYERSEDPIYV-----------LENNIPIDT-------HYYLENQISKPLLRIFE 887
+ + + +EDP+ LE+ P D Y + ++ PL+ +F+
Sbjct: 1123 ERLQE--DAAEDPLTAAKASALGLGLLLEHRHPADLAGQEGDYGLYWQKKLLTPLVEVFQ 1180
Query: 888 PILKNASK-----ELLSGDHTR---SISISTP----------------SNSGIMKFAKRQ 923
+ + EL G+H+R ++S P +N A RQ
Sbjct: 1181 ASVPPGQREAVLHELKGGEHSRVRVDAALSPPPPALGPASPPPRARGGTNGRGPAGAPRQ 1240
Query: 924 LSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQ-GSLHQDV 982
I N +G+ E Y + + +E + C+ C G + V
Sbjct: 1241 SQMARFFQPIPNK------EGKWEETYLGLLGEQAGVEARQCSAYATCRGCHSGGALEPV 1294
Query: 983 LCTSRDCPIFYRRKKAQKDMAEAKLQLDRWNF 1014
LC + +CP+ Y R + + QL R +
Sbjct: 1295 LCDNGECPVTYSRLACSSRLQQLDAQLRRLDI 1326
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 20/150 (13%)
Query: 122 IFGVTREGHSVCCKVHGFEPYFYISCP--QGMGPDDISHFHQILEGRMREANRNSKVPQF 179
++G T G SV ++ F+PYFY++ P Q G D ++IL R A
Sbjct: 70 VWGTTPGGASVLLRLPNFQPYFYVAAPKAQAEGADQDGMLNRILPNDCRLAG-------- 121
Query: 180 VRHIEMVQKRSIMYYQQQK--SQPFLKIVVALPTMVASCRGILDRG-----IQLDGLGMK 232
I+ V + I++Y+ + +P+LK+ + V + + ++ +GL +
Sbjct: 122 ---IDAVLRTPILFYRPDRPEGEPYLKLTLGTGASVKRASAAVQKAMVAGHLRQEGLVWR 178
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVP 262
YE+ V R ++D + GG W+ VP
Sbjct: 179 DMTLYEAEVAPLQRLLVDVPVSGGAWLYVP 208
>gi|195474494|ref|XP_002089526.1| GE19149 [Drosophila yakuba]
gi|194175627|gb|EDW89238.1| GE19149 [Drosophila yakuba]
Length = 2007
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 185/604 (30%), Positives = 289/604 (47%), Gaps = 53/604 (8%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGSEQGTYEGATVLEA 506
EMA++ G+ +LSRG +V S +LR AK KNLV P+V+ + A ++E
Sbjct: 1411 EMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQARAHMRAPEYLALIMEP 1470
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV---------TPED--ARKLNLPPECVN 555
++ FY P+ LDF SLYPS+++AYN C+ST + TP + A +L + + +
Sbjct: 1471 QSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSTPFEFGASQLRVSRQMLQ 1530
Query: 556 K---------TPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLDG 605
K +P G FVK +++GILP +L E+L R+ K +K KD + +L
Sbjct: 1531 KLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHKDSSALQRILHS 1590
Query: 606 RQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEH 664
RQL LK+ AN YG+T A G++P +E+ +V S GR+ +E KLVE+ E
Sbjct: 1591 RQLGLKLMANVTYGYTAANFSGRMPAVEVGDTVVSKGRETLERAIKLVEN------NEEW 1644
Query: 665 NAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKK 724
V+YGDTDS+ V A ++G E A ++ +P+KL+ EKVY P +L +KK
Sbjct: 1645 KVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAKAVTEMNPQPVKLKLEKVYQPCILQTKK 1704
Query: 725 RYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKST 783
RY G +Y T + + KGIETVRRD C V ++ + L + +D+ YV
Sbjct: 1705 RYVGYMYETADQAQPVYEAKGIETVRRDGCPAVAKMLEKVLRILFETQDVSKIKAYVCRQ 1764
Query: 784 ISDLLMNRMDLSLLVITK---GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPY 840
+ LL R +L L+ K GL V A +EL + ++D P G+RVP+
Sbjct: 1765 FTKLLSGRANLQDLIFAKEFRGLNGYKPTACVPA--LELTRKWMQKDPRHVPRRGERVPF 1822
Query: 841 VIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNAS----- 894
+I+ G + P +L N I+ YY+ I PL R I N
Sbjct: 1823 IIVNGPPGMQLIRLVRSPHDILGNEGHKINAIYYITKAIIPPLNRCLLLIGANVHDWFAS 1882
Query: 895 --KELL---SGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAEL 949
++LL + + ++ + + S I ++ I C G +C+ C +
Sbjct: 1883 LPRKLLLTPAVGNANELAGARGAKSTISQYFSTTNCVIDCGRQTKAG-ICTTCMKNATKC 1941
Query: 950 YCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQL 1009
+ LE + CQ C G L + C S DCP+ Y + ++++ Q+
Sbjct: 1942 VIVLSDKTARLERGYQLTRQICQACCGRL-GSLQCDSLDCPVLYVLEGKRRELH----QI 1996
Query: 1010 DRWN 1013
+ W+
Sbjct: 1997 EHWH 2000
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 25/164 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------- 170
+IR+FG G C VHG PYFYI P D F + G ++ A
Sbjct: 47 VIRVFGGNSRGQKTCMHVHGVFPYFYI-------PYDKRDFECLERGILQIAMHLDKAIN 99
Query: 171 ---NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
+ S Q V I++V+ Y + + Q FLKI + P V +L G L
Sbjct: 100 ISLGQGSSNAQHVFKIQLVKGIPFYGYHRVEHQ-FLKIYMFNPRFVRRAANLLQSGAILS 158
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP--VGKYRKT 269
K+F +ES+V + L+FMID N+ G +++ VP V K+R++
Sbjct: 159 ----KNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRS 198
>gi|195332241|ref|XP_002032807.1| GM20982 [Drosophila sechellia]
gi|194124777|gb|EDW46820.1| GM20982 [Drosophila sechellia]
Length = 2127
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 185/604 (30%), Positives = 285/604 (47%), Gaps = 53/604 (8%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGSEQGTYEGATVLEA 506
EMA++ G+ +LSRG +V S +LR AK KNLV P+V+ + A ++E
Sbjct: 1531 EMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQARAHMRAPEYLALIMEP 1590
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---------------------VTPEDAR 545
++ FY P+ LDF SLYPS+++AYN C+ST V+ + +
Sbjct: 1591 QSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQMLQ 1650
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLD 604
KL L + V +P G FVK +++GILP +L E+L R+ K +K KD + +L
Sbjct: 1651 KL-LEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHKDSTALQRILH 1709
Query: 605 GRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYE 663
RQL LK+ AN YG+T A G++P +E+ SV S GR+ +E KLVE+ E
Sbjct: 1710 SRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSVVSKGRETLERAIKLVEN------NEE 1763
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISK 723
V+YGDTDS+ V A ++G E A ++ +P+KL+ EKVY P +L +K
Sbjct: 1764 WKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAKAVTEMNPQPVKLKLEKVYQPCMLQTK 1823
Query: 724 KRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS 782
KRY G +Y T ++ + KGIETVRRD C V ++ + L + +D+ YV
Sbjct: 1824 KRYVGYMYETADQEQPVYEAKGIETVRRDGCPAVAKMLEKVLRILFETQDVSKIKAYVCR 1883
Query: 783 TISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAATAPNVGDRVPY 840
+ LL + +L L+ K + + Y+ A +EL + ++D P G+RVP+
Sbjct: 1884 QFTKLLSGKANLQDLIFAKEF-RGLNGYKPTACVPALELTRKWMQKDPRHVPRRGERVPF 1942
Query: 841 VIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNASKELLS 899
+I+ G + P +L N I+ YY+ I PL R I N S
Sbjct: 1943 IIVNGPPGMQLIRLVRSPHDILANEGHKINAIYYITKAIIPPLNRCLLLIGANVHDWFAS 2002
Query: 900 GDHT--RSISISTPSNSGIMKFAKRQLS--------CIGCKALISNGTLCSHCKGREAEL 949
+ ++ T + + AK +S I C G +C C +
Sbjct: 2003 LPRKLLMTPAVGTANELAGARCAKSTISQYFSTTSCVIDCGRQTKTG-ICPDCLKNATKC 2061
Query: 950 YCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQL 1009
+ LE + CQ C G L + C S DCP+ Y + ++++ Q+
Sbjct: 2062 VVVLSDKSARLERGYQLTRQICQACCGRLG-SLQCDSLDCPVLYVLEGKRRELQ----QI 2116
Query: 1010 DRWN 1013
+ WN
Sbjct: 2117 EHWN 2120
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------- 170
+IR+FG G C VHG PY YI P D F + G ++ A
Sbjct: 47 VIRVFGGNSRGQKTCMHVHGVFPYLYI-------PYDKKDFESLERGILQMAMHLDKAIN 99
Query: 171 ---NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
+ S Q V I++V+ Y + + Q FLKI + P V +L G L
Sbjct: 100 ISLGQGSSNAQHVFKIQLVKGIPFYGYHRVEHQ-FLKIYMFNPRFVRRAANLLQSGAILS 158
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP--VGKYRKT 269
K+F +ES+V + L+FMID N+ G +++ VP V K+R++
Sbjct: 159 ----KNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRS 198
>gi|194863706|ref|XP_001970573.1| GG23303 [Drosophila erecta]
gi|190662440|gb|EDV59632.1| GG23303 [Drosophila erecta]
Length = 1920
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 185/605 (30%), Positives = 285/605 (47%), Gaps = 55/605 (9%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGSEQGTYEGATVLEA 506
EMA++ G+ +LSRG +V S +LR AK KNLV P+V+ + A ++E
Sbjct: 1324 EMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQARAHMRAPEYLALIMEP 1383
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---------------------VTPEDAR 545
++ FY P+ LDF SLYPS+++AYN C+ST V+ + +
Sbjct: 1384 QSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQMLQ 1443
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLD 604
KL L + V +P G FVK +++GILP +L E+L R+ K +K KD + +L
Sbjct: 1444 KL-LEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHKDSSALQRILH 1502
Query: 605 GRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYE 663
RQL LK+ AN YG+T A G++P +E+ +V S GR+ +E KLVE+ E
Sbjct: 1503 SRQLGLKLMANVTYGYTAANFSGRMPAVEVGDTVVSKGRETLERAIKLVEN------NEE 1556
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISK 723
V+YGDTDS+ V A ++G E A ++ +P+KL+ EKVY P +L +K
Sbjct: 1557 WKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAKAVTEMNPQPVKLKLEKVYQPCMLQTK 1616
Query: 724 KRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS 782
KRY G +Y T + + KGIETVRRD C V ++ + L + +D+ YV
Sbjct: 1617 KRYVGYMYETADQAQPVYEAKGIETVRRDGCPAVAKMLEKVLRILFETQDVSKIKAYVCR 1676
Query: 783 TISDLLMNRMDLSLLVITK---GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVP 839
+ LL R +L L+ K GL V A +EL + ++D P G+RVP
Sbjct: 1677 QFTKLLSGRANLQDLIFAKEFRGLNGYKPTACVPA--LELTRKWMQKDPRHVPRRGERVP 1734
Query: 840 YVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNAS---- 894
++I+ G + P +L N I+ YY+ I PL R I N
Sbjct: 1735 FIIVNGPPGMQLIRLVRSPHDILGNEGHKINAIYYITKAIIPPLNRCLLLIGANVHDWFA 1794
Query: 895 ---KELL---SGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAE 948
++LL + ++ + + S I ++ I C G +C C +
Sbjct: 1795 SLPRKLLLTPAVGTANELAGARGAKSTISQYFSTTSCVIDCGRQTKAG-ICPDCMKNATK 1853
Query: 949 LYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQ 1008
+ LE + CQ C G L + C S DCP+ Y + ++++ Q
Sbjct: 1854 CVVVLSDKTARLERGYQLTRQICQSCCGRLG-SLQCDSLDCPVLYVLEGKRRELQ----Q 1908
Query: 1009 LDRWN 1013
++ W+
Sbjct: 1909 IEHWH 1913
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 25/164 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------- 170
+IR+FG G C VHG PYFYI P D + F + G ++ A
Sbjct: 47 VIRVFGGNSRGQKTCMHVHGVFPYFYI-------PYDKNDFECLERGILQMAMHLDKAIN 99
Query: 171 ---NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
+ S Q V I++V+ Y + + Q FLKI + P V +L G L
Sbjct: 100 ISLGQGSSNAQHVFKIQLVKGIPFYGYHRMEHQ-FLKIYMFNPRFVRRAANLLQSGAILS 158
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP--VGKYRKT 269
K+F +ES+V + L+FMID N+ G +++ VP V K+R++
Sbjct: 159 ----KNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRS 198
>gi|297291939|ref|XP_001086055.2| PREDICTED: DNA polymerase zeta catalytic subunit [Macaca mulatta]
Length = 3064
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 237/441 (53%), Gaps = 33/441 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNL--VIPNVKQAGS 493
++L++L I EMAR+ G+ +L+RG +V S +LR AK N V P+V+Q
Sbjct: 2526 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2585
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST-LVTPEDARK------ 546
+ ++E + FY + LDF SLYPSI++AYN C+ST L E+ K
Sbjct: 2586 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2645
Query: 547 ----LNLPPEC-------VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAK 595
L +PP+ + +P+G FVK +++KG+LP +LEE+L R K +K K
Sbjct: 2646 GCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK 2705
Query: 596 -DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 653
D +LD RQL LK+ AN +G+T A G++PCIE+ S+ R+ +E KLV
Sbjct: 2706 QDRALSRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVN 2765
Query: 654 DKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEK 713
D T G A V+YGDTDS+ V T E + K+G+E A+ ++ T KP+KL+FEK
Sbjct: 2766 D--TKKWG----ARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEK 2819
Query: 714 VYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
VY P +L +KKRY G +Y T +K D KGIETVRRD+C V ++ L + RD
Sbjct: 2820 VYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRD 2879
Query: 773 IPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 830
I QYV+ LL + + + K + Y+ A +EL +M D +
Sbjct: 2880 ISLIKQYVQRQCMKLLEGKASIQDFIFAKEY-RGSFSYKPGACVPALELTRKMLTYDRRS 2938
Query: 831 APNVGDRVPYVIIKAAKGAKA 851
P VG+RVPY I KA +++
Sbjct: 2939 EPQVGERVPY-IHKATNSSRS 2958
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREAN----RNS 174
++RIFG T G C +HG PY Y+ G G S+ Q+ R N S
Sbjct: 37 VVRIFGATPAGQKTCLHLHGIFPYLYVPY-DGYGQQPESYLSQMAFSIDRALNVALGNPS 95
Query: 175 KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
Q V + +V Y +K + F+KI + P +V +L G ++ K +
Sbjct: 96 STAQHVFKVSLVSGMPFYGY-HEKERHFMKIYLYNPAVVKRICELLQSGAIMN----KFY 150
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+E+++ + L+ ID N+ G N I + K+RK +
Sbjct: 151 QPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFRKARR 187
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 924 LSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVL 983
L C C L +G +CS C+ + + +++ELE +L C+ C G + +
Sbjct: 2974 LHCPVCDDLTQHG-ICSKCRSQPQHVAVILNQEIRELERKQEQLVKICKNCTGCFDRHIP 3032
Query: 984 CTSRDCPIFYRRKKAQKDMAEA 1005
C S +CP+ ++ + +++++A
Sbjct: 3033 CVSLNCPVLFKVSRVNRELSKA 3054
>gi|78523223|gb|ABB46349.1| UPR1 [Neurospora tetrasperma]
Length = 1926
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/495 (33%), Positives = 255/495 (51%), Gaps = 36/495 (7%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L +L+K I E AR+ GV ++SRG KV S + R AK + ++
Sbjct: 1144 YYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVVSRGSQFKVESIMFRIAKPEKFLL 1203
Query: 486 --PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1204 ASPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIV 1263
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L + +N P+G + K +++K +L ++L E+L R
Sbjct: 1264 SWRGKNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMV 1323
Query: 588 KADLKEAKDPLEKAV---LDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQ 643
K+ +K+ KD +KA+ L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+
Sbjct: 1324 KSGMKQDKD--DKAIQQLLNNRQLALKLLANVNYGYTSASFSGRMPCSEIADSIVQTGRE 1381
Query: 644 MIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTF 703
+E + +V + +AEV+YGDTDS+ V T E A ++G+E AD ++
Sbjct: 1382 TLERAIAFIH----SVRKW--DAEVVYGDTDSLFVSLKGRTREQAFEIGQEIADAVTKLN 1435
Query: 704 IKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTE 762
+P+KL+FEKVY+P +L++KKRY G Y + + D KGIETVRRD + + +
Sbjct: 1436 PRPVKLKFEKVYHPCILLAKKRYVGYKYESRDQTVPVFDAKGIETVRRDGTPAEQRIEEK 1495
Query: 763 CLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVE 818
L + D+ Y + ++ + + + G T A
Sbjct: 1496 ALKILFETADLSQVKSYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGAL 1555
Query: 819 LAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQ 877
+A + K DA P G+RVPYV++ A G + +R +P +L N + +D YY+
Sbjct: 1556 IATKKMKEDARAEPQYGERVPYVVMAGAPGMRLVDRCVEPEELLNNAHATLDADYYINMN 1615
Query: 878 ISKPLLRIFEPILKN 892
I PL RIF + N
Sbjct: 1616 IIPPLERIFNLVGAN 1630
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+IR+FG T +G VC +HG PY Y+ + PD H + ++ R+ P+
Sbjct: 42 VIRVFGSTDKGQKVCAHIHGASPYLYVEYDGNLEPDKD---HALAISYRKDPIRDR--PK 96
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 237
+V I + + I +Y F LKI + P +++ +L +G+ + + F Y
Sbjct: 97 YVARITLT--KGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMS----RKFQPY 150
Query: 238 ESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
E+++ + L+FM D N+ G N+++ + +R
Sbjct: 151 EAHLQYLLQFMADYNLYGCNYLDAAMATFR 180
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L ++V E + + CQ C G + ++V C S+DCP+FY R
Sbjct: 1759 LCHRCASDPPTLMVDMQAKVSRAEKSYVEIMKVCQSCAGFASSEEVPCDSKDCPVFYSRV 1818
Query: 997 KAQKDMAEAK 1006
K + + K
Sbjct: 1819 KQRTKVTAVK 1828
>gi|302658851|ref|XP_003021124.1| hypothetical protein TRV_04773 [Trichophyton verrucosum HKI 0517]
gi|291185005|gb|EFE40506.1| hypothetical protein TRV_04773 [Trichophyton verrucosum HKI 0517]
Length = 1594
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 250/481 (51%), Gaps = 33/481 (6%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
+LD I E AR+ G+ + SRG KV S + R AK +N ++ P+ KQ G +
Sbjct: 1021 ILDANELISRTSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFILISPSRKQVGQQ 1080
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LVTPEDARK---- 546
V+E ++ FY P+ LDF SLYPSIM+AYN CYST +V K
Sbjct: 1081 NALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWRGRNKMGIT 1140
Query: 547 --------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKD-- 596
L L + +N P+G +VK ++K +L ++L E+L R K +KE KD
Sbjct: 1141 DYEREPGLLRLLKDKINIAPNGIIYVKQEVRKSLLAKMLTEILETRVMVKNGMKEDKDDR 1200
Query: 597 PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDK 655
PL++ +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +E L+
Sbjct: 1201 PLQR-LLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTARETLEKAIALIH-- 1257
Query: 656 FTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
+V + AEV+YGDTDS+ + T A LG E A I+ + +P+KL+FEKVY
Sbjct: 1258 --SVKRW--GAEVVYGDTDSLFIYLKGRTRAEAFDLGEEIAKTITDSNPRPVKLKFEKVY 1313
Query: 716 YPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIP 774
+P +L++KKRY G Y + ++ + D KGIETVRRD + + + L + D+
Sbjct: 1314 HPCVLLAKKRYVGYKYESKNQEKPEFDAKGIETVRRDGTPAEQKIEEKALRLLFETSDLS 1373
Query: 775 GAVQYVKSTISDLLMNRMDLSLLVITK--GLTKTGDDYEVKAAHVELAERMRKRDAATAP 832
+Y + S ++ ++ + K L D + A+RM + D P
Sbjct: 1374 RIKEYFQKQCSKIMRGKVSVQDFCFAKEVKLGTYSDRGAPPPGALISAKRMLE-DPRLEP 1432
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILK 891
G+RVPYV++ A GA+ +R P +L++ + +D YY+ + PL RIF +
Sbjct: 1433 QYGERVPYVVVSGAPGARLIDRCFPPEVLLQDPQLELDAEYYISKNLIPPLERIFNLVGA 1492
Query: 892 N 892
N
Sbjct: 1493 N 1493
>gi|326633649|gb|ADZ99567.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 264/522 (50%), Gaps = 54/522 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R RL +YC+KD+ L LL M E+A++ +P
Sbjct: 465 KKEDVSYKEIPHLFRQGPGGRARLGLYCVKDSALVLDLLRYFMTHVEISEIAKIAKIPTR 524
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A ++ ++P + A +E Y+GATV++ GFY P+ +D
Sbjct: 525 RVLTDGQQIRVFSCLLDVAGREGYILPADRHADAE--GYQGATVIDPSPGFYNTPVLVVD 582
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-------ECVNKTPSGETFVKSNLQKGI 572
FASLYP+I+ A+NLCYST++ P D +L L P E FVK + +
Sbjct: 583 FASLYPTIIQAHNLCYSTMI-PGD--RLCLHPHLGPGDYETFELASGPVHFVKKHKAVSL 639
Query: 573 LPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIE 632
L +L LA RK + +L D + +LD +QLA+K++ N+VYGFTG G LPC++
Sbjct: 640 LATLLNVWLAKRKAIRRELATVSDEAARTILDKQQLAIKVTCNAVYGFTGVASGILPCLK 699
Query: 633 ISSSVTSYGRQMIEHTKKLVE----DKFTTVGGY------EHNAEVIYGDTDSVMVQFGV 682
I+ +VT GR+M+E++K+ +E + + G + + +VIYGDTDS+ +
Sbjct: 700 IAETVTFQGRRMLENSKRYIEGVTPEGLADILGRRVECAPDASFKVIYGDTDSLFIHCRG 759
Query: 683 PTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
E E A +++ T F+ PIKLE EK + +L++KKRY G+ T D++
Sbjct: 760 YRPEQVTGFCDELAAHMTRTLFVDPIKLEAEKTFKCLILLTKKRYIGMMTT-----DRLL 814
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------V 777
KG++ VR+ C V+ L ++ D + A V
Sbjct: 815 MKGVDLVRKTACRFVQETTKAILDLVMGDEAVRAAAERLCAMRVEEVCARGPPVGFLKVV 874
Query: 778 QYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVGD 836
+ + L +NR+ + L + L++ Y+ + H+ + ++ +R+ P + D
Sbjct: 875 DILNDSYRKLRLNRVPVGQLSFSTELSRPISYYKTLTLPHLVVYHKIMQRNEEL-PQIHD 933
Query: 837 RVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
R+ YV +++ KG E +EDP Y ++NIP Y + I
Sbjct: 934 RIAYVFVQSPKGKLRSEMAEDPAYAAQHNIPPAVDLYFDKVI 975
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 142/314 (45%), Gaps = 32/314 (10%)
Query: 92 MFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGM 151
++ Q D+V +++P S ++++ G T + SVC V E YFY+ P+G+
Sbjct: 104 VYGQDRCDHVPFQFQTDIIP----SGTVLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGL 159
Query: 152 GPDDISHFHQILEGRMREANR-NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALP 210
D + +++ +R N Q E KR + Y + + +
Sbjct: 160 KLDFL----------IQQCSRENFNFSQGRYRYEKTSKRVLREYCVEAREVY-------- 201
Query: 211 TMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT- 269
+ AS +G +D + GL +E+NV A RF+ID W R+
Sbjct: 202 RVFASSQGFVD--LLAGGLTAAGCEVFETNVDAARRFIIDNGFSTFGWYSCAAAVPRQGG 259
Query: 270 AKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VI 327
A S+ +LE+DC D+ ++ + +LSFDIEC G G FP + D ++
Sbjct: 260 AARDSWTELEYDCAAGDLEFYAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMIL 315
Query: 328 QVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIG 387
Q++ ++ G + ++ L +C I GV+V +E D+L + IR+ D + G
Sbjct: 316 QISCVIWKAGSGEAPRSVLLNLGTCEEIEGVEVYQCPSELDLLYLFFTMIRDADVEFGAG 375
Query: 388 YNICKFDLPYLIEK 401
YNI FD PY+I++
Sbjct: 376 YNISNFDFPYVIDR 389
>gi|444319010|ref|XP_004180162.1| hypothetical protein TBLA_0D01350 [Tetrapisispora blattae CBS 6284]
gi|387513204|emb|CCH60643.1| hypothetical protein TBLA_0D01350 [Tetrapisispora blattae CBS 6284]
Length = 1352
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 173/604 (28%), Positives = 283/604 (46%), Gaps = 44/604 (7%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGS 493
+LL I E AR+ G+ + RG KV S L R K +N ++ P+ Q +
Sbjct: 766 KLLIHFQLIPRITEQARLVGIDFRSVYHRGSQYKVESFLTRITKNENFLLFSPSRSQVRA 825
Query: 494 EQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC 553
++ V+E + +Y+ P+ LDF SLYPSI+ YN CYST++ ++ +L++ +
Sbjct: 826 QKALECIPLVMEPESSYYQSPVLVLDFQSLYPSIICGYNYCYSTML--DENNRLDVRSK- 882
Query: 554 VNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAV-----LDGRQL 608
N +P+G FV + +++ IL +L+ELLA R K+ E + +A+ LDG+Q
Sbjct: 883 -NVSPNGVEFVNTTIRESILGRMLQELLACRVMVKSTRNELRTHGGEAINAAAQLDGQQQ 941
Query: 609 ALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAE 667
ALK+ AN YG+ A+ G++PC ++ SV GR+++ L+ + A
Sbjct: 942 ALKLLANVTYGYAAASFSGRMPCSLVADSVVETGREVLRSAIALIGESENVK---RWGAR 998
Query: 668 VIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYA 727
V+YGDTDS+ V T ++ +E D I+ PI+++ EKVY P LL+ KKRY
Sbjct: 999 VVYGDTDSLFVHLPGKTHSDGFRIAKEIVDSINACNRAPIQIKLEKVYQPSLLLGKKRYV 1058
Query: 728 GLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDL 787
G + D KGIETVRRD C L + +V +CL + D+ +Y++ +
Sbjct: 1059 GYAQEHLNGPITFDAKGIETVRRDGCHLQQRIVEQCLRILFDSNDLSKVKEYLREEFDRI 1118
Query: 788 LMNRMDLSLLVITKGLTKTGDDYEVKA--AHVELAERMRKRDAATAPNVGDRVPYVIIKA 845
+ L + + + G K A +A R K D + P +RV YV++K
Sbjct: 1119 RNGLVSLPEFFFAREV-RLGHYRSNKTAPAGAHVAMRQAKNDKRSRPQYRERVKYVVVKG 1177
Query: 846 AKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRS 905
A G +RS P+ L+ N +D YY+ + PL R+F N + G
Sbjct: 1178 AHGTTLRDRSLTPLEYLDGNYELDYEYYVGKCLIPPLERLF-----NCLGISVKGWDLEF 1232
Query: 906 ISISTPSNSGIMKFAKRQLSCIGCKAL--------ISNGTLCSHCKGREAELYCKTVSQV 957
I +N+ + A C+ C+ + C C +L ++Q
Sbjct: 1233 RRIVGNTNNIFFESA----LCVHCRVRSRKKDVDGVGWSQFCDECSQDRQKLCVDLLTQK 1288
Query: 958 QELEVLFGRLWTQCQECQGSLHQDVL-------CTSRDCPIFYRRKKAQK--DMAEAKLQ 1008
+ LE + +C+ C + D+L C S +CPIF+ R A++ + + +
Sbjct: 1289 RNLETKHACVNWKCRGCNFAYTGDILDAGAAERCISAECPIFFERVSAEQLELLNKGLAE 1348
Query: 1009 LDRW 1012
L+ W
Sbjct: 1349 LNEW 1352
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 95 QLDIDYVIGDSNRELLPLSS-GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGP 153
+LD+ + GDS LP++ IIR+FG GH V C +HG PYF++ +
Sbjct: 30 RLDVSH--GDS----LPMNKFDQIPIIRVFGKLLSGHQVLCHIHGVFPYFFVPYNGEISD 83
Query: 154 DDI------SHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKS-QPFLKI- 205
+ + H++LE R +S + V ++ +V ++I +Y K + F KI
Sbjct: 84 SSVVMNQKCAQLHKVLERRSLNGKNDSNNLKNVANVSIV--KAIRFYGYHKDWELFYKIS 141
Query: 206 VVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGK 265
+ + M C + I KS T+ES++ + L+F D N+ G +W+ +
Sbjct: 142 FLNVSVMTQVCELFREGKI-----FKKSVDTFESHIPYLLQFSCDYNLFGCHWMSLEKCY 196
Query: 266 YR 267
+R
Sbjct: 197 FR 198
>gi|88604878|gb|ABD46759.1| REV3 [Neurospora crassa]
Length = 1926
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 252/493 (51%), Gaps = 32/493 (6%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L +L+K I E AR+ GV + SRG KV S + R AK +N ++
Sbjct: 1144 YYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1203
Query: 486 PNV--KQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1204 PSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIV 1263
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L + +N P+G + K +++K +L ++L E+L R
Sbjct: 1264 SWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMV 1323
Query: 588 KADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+ +
Sbjct: 1324 KSGMKQDKDDRAIQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETL 1383
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E + +V + +AEV+YGDTDS+ V T A ++G+E AD ++ +
Sbjct: 1384 ERAIAFIH----SVQKW--DAEVVYGDTDSLFVSLKGRTRGQAFEIGQEIADAVTKLNPR 1437
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + + D KGIETVRRD + + + L
Sbjct: 1438 PVKLKFEKVYHPCVLLAKKRYVGYKYESRDQTVPVFDAKGIETVRRDGTPAEQWIEEKAL 1497
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVELA 820
+ D+ Y + ++ + + + G T A +A
Sbjct: 1498 KILFETADLSQVKSYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGALIA 1557
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQIS 879
+ K DA P G+RVPYV++ A G + +R +P +L N + +D YY+ I
Sbjct: 1558 TKKMKEDARAEPQYGERVPYVVMAGAPGMRLVDRCVEPEELLNNAHATLDADYYINKNII 1617
Query: 880 KPLLRIFEPILKN 892
PL RIF + N
Sbjct: 1618 PPLERIFNLVGAN 1630
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
+ +IR+FG T +G VC +HG PY Y+ + P+ H + ++ R+
Sbjct: 37 AAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDGDLEPNKD---HALAISYRKDPIRD 93
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
P++V I + K + Y + +LKI + P +++ +L G+ + +
Sbjct: 94 R--PKYVARISLT-KGTPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQHGVIMS----RK 146
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F YE+++ + L+FM D N+ G N+++ + +R
Sbjct: 147 FQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFR 180
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L ++V E + + CQ C G +L ++V C S+DCP+FY R
Sbjct: 1759 LCHRCASDPPTLMVDMQAKVSRAEKSYVEIMKVCQSCAGFALSEEVPCDSKDCPVFYSRV 1818
Query: 997 KAQKDMAEAK 1006
K + + K
Sbjct: 1819 KQRTKVTAVK 1828
>gi|312378973|gb|EFR25393.1| hypothetical protein AND_09281 [Anopheles darlingi]
Length = 878
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 188/631 (29%), Positives = 288/631 (45%), Gaps = 66/631 (10%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSE 494
+L +L I E+A++ G+ +LSRG +V S +LR AK N V P+++Q
Sbjct: 251 ILHQLDLIGRTAELAKLFGIQFYEVLSRGSQFRVESMMLRIAKPGNFVSVSPSIQQRAHM 310
Query: 495 QGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----------------- 537
+ ++E + FY PI LDF SLYPS+++AYN C+ST
Sbjct: 311 RAPEYLPLIMEPNSRFYADPIIVLDFQSLYPSVIIAYNYCFSTCLGRIEHLGVGEESVRE 370
Query: 538 -------LVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKAD 590
L P ++ L + +P G FVK +++G+LP +L E+L R K
Sbjct: 371 FEFGASHLRVPRKMLQVLLDKNLITCSPCGIAFVKKRVREGVLPRMLSEILNTRLMVKKS 430
Query: 591 LKEAKD-PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHT 648
+K KD + + VL RQL LK+ AN YG+T A G++PC+EI SV + GR+ +E
Sbjct: 431 MKLHKDNTILQRVLHSRQLGLKLIANVTYGYTAANFSGRMPCVEIGDSVVAKGRETLERA 490
Query: 649 KKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIK 708
KLVE+ T G A+V+YGDTDS+ V A K+G E + ++ P+K
Sbjct: 491 IKLVEE--TERWG----AKVVYGDTDSLFVLCPGRNKAEAFKIGEEISAAVTAQNPPPVK 544
Query: 709 LEFEKVYYPYLLISKKRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKI 767
L+ EKVY P +L +KKRY G +Y + ++ + KGIETVRRD C +V ++ + L +
Sbjct: 545 LKLEKVYQPSILQTKKRYVGYMYESADQEKPTYEAKGIETVRRDGCPVVAKMLEKVLRIL 604
Query: 768 LVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRK 825
D+ QY + +L R++L + K + D Y+ A +EL + +
Sbjct: 605 FETCDVSKVKQYTCRQFTKILEGRVNLQDFIFAKEF-RGEDGYKPGACVPALELTRKWKL 663
Query: 826 RDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLR 884
D P G RVPYVII P VL N + I+ +YY+ I PL R
Sbjct: 664 TDPRREPRRGQRVPYVIINGPPLVPLIRLVRSPDEVLANEGLKINANYYILKAIIPPLNR 723
Query: 885 IFEPI-----------------LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQL--- 924
I L N ++ T + + +S + K +
Sbjct: 724 CLLLIGADVNRWYNELPRKTLMLHNTGGTTMATTTTSKMQAAIRDSSDAQQAKKSTISQY 783
Query: 925 ----SCI-GCKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLH 979
SCI C NG +C C+ R +++V +LE C+ C
Sbjct: 784 FSTTSCIVDCGRQTHNG-VCKECRNRPQYALVHIMNKVNKLERRLELTEKMCRSCCQRTF 842
Query: 980 QDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
+ C S DCP+ + + Q ++ +A+ D
Sbjct: 843 ESA-CISLDCPVVFSLNRRQLEVKQAQYYRD 872
>gi|46519343|gb|AAS99991.1| JM14 [Macaca fuscata rhadinovirus]
gi|365735200|gb|AEW87539.1| JM14 [Macaca fuscata rhadinovirus]
gi|365735371|gb|AEW87709.1| JM14 [Macaca fuscata rhadinovirus]
Length = 1012
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 261/525 (49%), Gaps = 61/525 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R ++ YC+ D+ L LL M E+A++ +
Sbjct: 469 KKEDVSYKDIPPLFRSGPGGRAKVGSYCVMDSVLVMDLLKMFMIHVEISEIAKLAKIQAR 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ ++V S LL A + N ++P G QG Y+GATV+ GFY++P+ +D
Sbjct: 529 RVLTDGQQLRVFSCLLEAAARDNFILPVPTPEG--QGGYQGATVINPIPGFYDEPVLVVD 586
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFV---------KSNLQ 569
FASLYPSI+ A+NLCYST++ R L+L P N TP ETFV K + +
Sbjct: 587 FASLYPSIIQAHNLCYSTMI---HGRDLHLHP---NLTPDDYETFVLSGGPVHFVKKHKR 640
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
+ +L +L L R+ + L DP K +LD +QLA+K++ N+VYGFTG G LP
Sbjct: 641 ESLLGRLLTVWLEKRRAIRRTLAACDDPSLKTILDKQQLAIKVTCNAVYGFTGVASGLLP 700
Query: 630 CIEISSSVTSYGRQMIEHTKKLVE----DKFTTVGGYE----HNA--EVIYGDTDSVMVQ 679
CI I+ +VT GR M+E +K VE D T G E H A V+YGDTDS+ +
Sbjct: 701 CINIAETVTLRGRTMLEMSKSYVEALTTDNLRTRLGREVTACHGARFRVVYGDTDSLFIA 760
Query: 680 FGVPTVEAAMKLGREAADYISG-TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+ EA + A I+ F PIKLE EK + LL++KKRY G+ D
Sbjct: 761 CDGYSAEAVSAFCDDLAARITADLFPPPIKLEAEKTFKCLLLLTKKRYIGVLLN-----D 815
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA---------------------- 776
KM KG++ +R+ C V+ L +L ++++ A
Sbjct: 816 KMVMKGVDLIRKTACKFVQERCRSILDLVLHNQEVKAAARLLCKRPPHAVYEEGLPAGFI 875
Query: 777 --VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPN 833
V+ + ++ DL + + + L + L++ DY+ H+ + +++ R P
Sbjct: 876 KIVEVLNASYVDLRNSVVPIEQLTFSTELSRPVCDYKTTNLPHLAVYQKLASR-CEELPQ 934
Query: 834 VGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
V DR+PYV + A GA + +E P YV ++ IP+ Y + +
Sbjct: 935 VHDRIPYVFVD-APGALKSDLAEHPDYVKQHQIPVAVDLYFDKLV 978
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 154/328 (46%), Gaps = 41/328 (12%)
Query: 87 QCQSIMFQQLDIDYVIGDSNR----------ELLPLSSGSAAIIRIFGVTREGHSVCCKV 136
Q QSI F D+ ++R +++P S ++++ G T G SVC V
Sbjct: 94 QDQSITFHAYDVVETTYAADRCAEVPSRFQTDIIP----SGTVLKLLGRTENGTSVCVNV 149
Query: 137 HGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQ 196
+ YFY P G+ +++H +L+ ++ + R + + I+
Sbjct: 150 FRQQVYFYAKVPAGV---NVTH---VLQQALKNTAGRAACGFSTRRV----TKKILKTYD 199
Query: 197 QKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGG 256
P +I ++ +M+++ + DR L G + F ESNV RF++D
Sbjct: 200 VAEHPVTEITLSSGSMLST---LSDR---LVACGCEVF---ESNVDAVRRFVLDHGFTTF 250
Query: 257 NWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKG 316
W R A+ + LEFDC + D+ + + S P+RI++FDIEC G G
Sbjct: 251 GWYSCARATPRLAARD-ARTALEFDCSWEDL---SVQADRSDWPPYRIVAFDIECMGEAG 306
Query: 317 HFPEPTHD--PVIQVANLVTLQGEKQPFIRNVM-TLKSCAPIVGVDVMSFETERDVLLAW 373
FP T D VIQ++ + E P N++ ++ +C PI DV+ F +E D+L+++
Sbjct: 307 -FPCATRDGDAVIQISCVFYTTREGAPNPPNILFSVGTCDPIPDTDVLEFPSEYDMLVSF 365
Query: 374 RDFIREVDPDVMIGYNICKFDLPYLIEK 401
+R+ + D + GYNI FDLPYLI +
Sbjct: 366 FAMLRDFEVDFLTGYNISNFDLPYLITR 393
>gi|326633671|gb|ADZ99578.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 264/522 (50%), Gaps = 54/522 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R RL +YC+KD+ L LL M E+A++ +P
Sbjct: 465 KKEDVSYKEIPHLFRQGPGGRARLGLYCVKDSALVLDLLRYFMTHVEISEIAKIAKIPTR 524
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A ++ ++P + A +E Y+GATV++ GFY P+ +D
Sbjct: 525 RVLTDGQQIRVFSCLLDVAGREGYILPADRHADAE--GYQGATVIDPSPGFYNTPVLVVD 582
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-------ECVNKTPSGETFVKSNLQKGI 572
FASLYP+I+ A+NLCYST++ P D +L L P E FVK + +
Sbjct: 583 FASLYPTIIQAHNLCYSTMI-PGD--RLCLHPHLGPGDYETFELASGPVHFVKKHKAVSL 639
Query: 573 LPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIE 632
L +L LA RK + +L D + +LD +QLA+K++ N+VYGFTG G LPC++
Sbjct: 640 LATLLNVWLAKRKAIRRELATVSDEAVRTILDKQQLAIKVTCNAVYGFTGVASGILPCLK 699
Query: 633 ISSSVTSYGRQMIEHTKKLVE----DKFTTVGGY------EHNAEVIYGDTDSVMVQFGV 682
I+ +VT GR+M+E++K+ +E + + G + + +VIYGDTDS+ +
Sbjct: 700 IAETVTFQGRRMLENSKRYIEGVTPEGLADILGRRVECAPDASFKVIYGDTDSLFIHCRG 759
Query: 683 PTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
E E A +++ T F+ PIKLE EK + +L++KKRY G+ T D++
Sbjct: 760 YRPEQVTGFCDELAAHMTRTLFVDPIKLEAEKTFKCLILLTKKRYIGMMTT-----DRLL 814
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------V 777
KG++ VR+ C V+ L ++ D + A V
Sbjct: 815 MKGVDLVRKTACRFVQETTKAILDLVMGDEAVRAAAERLCAMRVEEVCARGPPVGFLKVV 874
Query: 778 QYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVGD 836
+ + L +NR+ + L + L++ Y+ + H+ + ++ +R+ P + D
Sbjct: 875 DILNDSYRKLRLNRVPVGQLSFSTELSRPISYYKTLTLPHLVVYHKIMQRNEEL-PQIHD 933
Query: 837 RVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
R+ YV +++ KG E +EDP Y ++NIP Y + I
Sbjct: 934 RIAYVFVQSPKGKLRSEMAEDPAYAAQHNIPPAVDLYFDKVI 975
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 143/314 (45%), Gaps = 32/314 (10%)
Query: 92 MFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGM 151
++ Q D+V +++P S ++++ G T + SVC V E YFY+ P+G+
Sbjct: 104 VYGQDRCDHVPFQFQTDIIP----SGTVLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGL 159
Query: 152 GPDDISHFHQILEGRMREANR-NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALP 210
D + +++ +R N Q E KR + Y + + +
Sbjct: 160 KLDFL----------IQQCSRENFNFSQGRYRYEKTNKRVLREYCVEAREVY-------- 201
Query: 211 TMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT- 269
+ AS +G +D + GL +E+NV A RF+ID W R+
Sbjct: 202 RVFASSQGFVD--LLAGGLTAAGCEVFETNVDAARRFIIDNGFSTFGWYSCAAAVPRQGG 259
Query: 270 AKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VI 327
A S+ +LE+DC D+ ++ + +LSFDIEC G G FP + D ++
Sbjct: 260 AARDSWTELEYDCAAGDLEFHAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMIL 315
Query: 328 QVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIG 387
Q++ ++ G + ++ L +C I GV+V +E D+L + IR+ D + + G
Sbjct: 316 QISCVIWKAGSGEAPRSVLLNLGTCEEIEGVEVYQCPSELDLLYLFFTMIRDADVEFVTG 375
Query: 388 YNICKFDLPYLIEK 401
YNI FD PY+I++
Sbjct: 376 YNISNFDFPYVIDR 389
>gi|326633651|gb|ADZ99568.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 264/522 (50%), Gaps = 54/522 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R RL +YC+KD+ L LL M E+A++ +P
Sbjct: 465 KKEDVSYKEIPHLFRQGPGGRARLGLYCVKDSALVLDLLRYFMTHVEISEIAKIAKIPTR 524
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A ++ ++P + A +E Y+GATV++ GFY P+ +D
Sbjct: 525 RVLTDGQQIRVFSCLLDVAGREGYILPADRHADAE--GYQGATVIDPSPGFYNTPVLVVD 582
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-------ECVNKTPSGETFVKSNLQKGI 572
FASLYP+I+ A+NLCYST++ P D +L L P E FVK + +
Sbjct: 583 FASLYPTIIQAHNLCYSTMI-PGD--RLCLHPHLGPGDYETFELASGPVHFVKKHKAVSL 639
Query: 573 LPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIE 632
L +L LA RK + +L D + +LD +QLA+K++ N+VYGFTG G LPC++
Sbjct: 640 LATLLNVWLAKRKAIRRELATVSDEAVRTILDKQQLAIKVTCNAVYGFTGVASGILPCLK 699
Query: 633 ISSSVTSYGRQMIEHTKKLVE----DKFTTVGGY------EHNAEVIYGDTDSVMVQFGV 682
I+ +VT GR+M+E++K+ +E + + G + + +VIYGDTDS+ +
Sbjct: 700 IAETVTFQGRRMLENSKRYIEGVTPEGLADILGRRVECAPDASFKVIYGDTDSLFIHCRG 759
Query: 683 PTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
E E A +++ T F+ PIKLE EK + +L++KKRY G+ T D++
Sbjct: 760 YRPEQVTGFCDELAAHMTRTLFVDPIKLEAEKTFKCLILLTKKRYIGMMTT-----DRLL 814
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------V 777
KG++ VR+ C V+ L ++ D + A V
Sbjct: 815 MKGVDLVRKTACRFVQETTKAILDLVMGDEAVRAAAERLCAMRVEEVCARGPPVGFLKVV 874
Query: 778 QYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVGD 836
+ + L +NR+ + L + L++ Y+ + H+ + ++ +R+ P + D
Sbjct: 875 DILNDSYRKLRLNRVPVGQLSFSTELSRPISYYKTLTLPHLVVYHKIMQRNEEL-PQIHD 933
Query: 837 RVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
R+ YV +++ KG E +EDP Y ++NIP Y + I
Sbjct: 934 RIAYVFVQSPKGKLRSEMAEDPAYAAQHNIPPAVDLYFDKVI 975
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 28/290 (9%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANR-NS 174
S ++++ G T + SVC V E YFY+ P+G+ D + +++ +R N
Sbjct: 124 SGTVLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGLKLDFL----------IQQCSRENF 173
Query: 175 KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
Q E KR + Y + + + + AS +G +D + GL
Sbjct: 174 NFSQGRYRYEKTSKRVLREYCVEAREVY--------RVFASSQGFVD--LLAGGLTAAGC 223
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT-AKTLSYCQLEFDCLYSDIISRHPE 293
+E+NV A RF+ID W R+ A S+ +LE+DC D+
Sbjct: 224 EVFETNVDAARRFIIDNGFSTFGWYSCVAAVPRQGGAARDSWTELEYDCAAGDLEFHAGR 283
Query: 294 GEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLVTLQGEKQPFIRNVMTLKS 351
++ + +LSFDIEC G G FP + D ++Q++ ++ G + ++ L +
Sbjct: 284 ADWPG---YNVLSFDIECLGENG-FPNASRDEDMILQISCVIWKAGSGEAPRSVLLNLGT 339
Query: 352 CAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
C I GV+V +E D+L + IR+ D + + GYNI FD P++I++
Sbjct: 340 CEEIEGVEVYQCPSELDLLYLFFTMIRDADVEFVTGYNISNFDFPFVIDR 389
>gi|346977462|gb|EGY20914.1| DNA polymerase zeta catalytic subunit [Verticillium dahliae VdLs.17]
Length = 1499
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 175/556 (31%), Positives = 274/556 (49%), Gaps = 40/556 (7%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y++ + +L+ + H+S + ++G
Sbjct: 841 TGRHMINVWRAMRGELN---LLQYSMENV-VWHLLHRRIPHYSWSTLTKWYKSGIHRDMS 896
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
+L Y L L +++ I E AR+ GV + SRG KV S + R AK +
Sbjct: 897 KLLRYYLSRTRLDIDIIEANELIPRTSEQARLLGVDFFSVFSRGSQYKVESIMFRIAKPE 956
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ +Q G + V+E ++ FY P+ LDF SLYPS+M+AYNLCYST +
Sbjct: 957 NFILVSPSRQQVGGQNALECLPLVMEPQSAFYSSPVLVLDFQSLYPSVMIAYNLCYSTFL 1016
Query: 540 T----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
R L L + +N TP+G + K ++K +L ++L E+L
Sbjct: 1017 GRITSWRGMNKMGFTEYKRHQRLLELLKDHINITPNGMMYAKPEIRKSLLAKMLGEILET 1076
Query: 584 RKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1077 RVMVKSGMKQDKDDRSLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTG 1136
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + + NAEV+YGDTDS+ + T + A +G E A I+
Sbjct: 1137 RETLERAIAFIHSQ------ERWNAEVVYGDTDSLFIHLRGSTKDQAFDIGNEIAKEITD 1190
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLV 760
+PIKL+FEKVY+P +L++KKRY G Y + + D KGIETVRRD + +
Sbjct: 1191 MNPRPIKLKFEKVYHPCVLLAKKRYVGYKYESKSQVKPDFDAKGIETVRRDGTPAEQKIE 1250
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELA 820
+ L + D+ Y ++ ++ + + K + K G Y K A
Sbjct: 1251 EKALKLLFETADLSQVKAYFQAQCEKIMRGTVSIQDFCFAKEV-KLG-SYSDKGPPPPGA 1308
Query: 821 ERMRKR---DAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL-ENNIPIDTHYYLEN 876
KR DA P G+RVPYV++ A GA+ +R P +L ++ +D YY+
Sbjct: 1309 MISTKRMLEDARAEPQYGERVPYVVVTGAPGARLIDRCVAPETLLRDSQSQLDAEYYISK 1368
Query: 877 QISKPLLRIFEPILKN 892
+ PL RIF + N
Sbjct: 1369 NLIPPLERIFNLVGAN 1384
>gi|326633673|gb|ADZ99579.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 264/522 (50%), Gaps = 54/522 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R RL +YC+KD+ L LL M E+A++ +P
Sbjct: 465 KKEDVSYKEIPHLFRQGPGGRARLGLYCVKDSALVLDLLRYFMTHVEISEIAKIAKIPTR 524
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A ++ ++P + A +E Y+GATV++ GFY P+ +D
Sbjct: 525 RVLTDGQQIRVFSCLLDVAGREGYILPADRHADAE--GYQGATVIDPSPGFYNTPVLVVD 582
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-------ECVNKTPSGETFVKSNLQKGI 572
FASLYP+I+ A+NLCYST++ P D +L L P E FVK + +
Sbjct: 583 FASLYPTIIQAHNLCYSTMI-PGD--RLCLHPHLGPGDYETFELASGPVHFVKKHKAVSL 639
Query: 573 LPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIE 632
L +L LA RK + +L D + +LD +QLA+K++ N+VYGFTG G LPC++
Sbjct: 640 LATLLNVWLAKRKAIRRELATVSDEAVRTILDKQQLAIKVTCNAVYGFTGVASGILPCLK 699
Query: 633 ISSSVTSYGRQMIEHTKKLVE----DKFTTVGGY------EHNAEVIYGDTDSVMVQFGV 682
I+ +VT GR+M+E++K+ +E + + G + + +VIYGDTDS+ +
Sbjct: 700 IAETVTFQGRRMLENSKRYIEGVTPEGLADILGRRVECAPDASFKVIYGDTDSLFIHCRG 759
Query: 683 PTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
E E A +++ T F+ PIKLE EK + +L++KKRY G+ T D++
Sbjct: 760 YRPEQVTGFCDELAAHMTRTLFVDPIKLEAEKTFKCLILLTKKRYIGMMTT-----DRLL 814
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------V 777
KG++ VR+ C V+ L ++ D + A V
Sbjct: 815 MKGVDLVRKTACRFVQETTKAILDLVMGDEAVRAAAERLCAMRVEEVCARGPPVGFLKVV 874
Query: 778 QYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVGD 836
+ + L +NR+ + L + L++ Y+ + H+ + ++ +R+ P + D
Sbjct: 875 DILNDSYRKLRLNRVPVGQLSFSTELSRPISYYKTLTLPHLVVYHKIMQRNEEL-PQIHD 933
Query: 837 RVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
R+ YV +++ KG E +EDP Y ++NIP Y + I
Sbjct: 934 RIAYVFVQSPKGKLRSEMAEDPAYAAQHNIPPAVDLYFDKVI 975
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 143/314 (45%), Gaps = 32/314 (10%)
Query: 92 MFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGM 151
++ Q D+V +++P S ++++ G T + SVC V E YFY+ P+G+
Sbjct: 104 VYGQDRCDHVPFQFQTDIIP----SGTVLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGL 159
Query: 152 GPDDISHFHQILEGRMREANR-NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALP 210
D + +++ +R N Q E KR + Y + + +
Sbjct: 160 KLDFL----------IQQCSRENFNFSQGRYRYEKTSKRVLREYCVEAREVY-------- 201
Query: 211 TMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT- 269
+ AS +G +D + GL +E+NV A RF+ID W R+
Sbjct: 202 RVFASSQGFVD--LLAGGLTAAGCEVFETNVDAARRFIIDNGFSTFGWYSCAAAVPRQGG 259
Query: 270 AKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VI 327
A S+ +LE+DC D+ ++ + +LSFDIEC G G FP + D ++
Sbjct: 260 AARDSWTELEYDCAAGDLEFHAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMIL 315
Query: 328 QVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIG 387
Q++ ++ G + ++ L +C I GV+V +E D+L + IR+ D + + G
Sbjct: 316 QISCVIWKAGSGEAPRSVLLNLGTCDEIEGVEVYQCPSELDLLYLFFTMIRDADVEFVTG 375
Query: 388 YNICKFDLPYLIEK 401
YNI FD PY+I++
Sbjct: 376 YNISNFDFPYVIDR 389
>gi|281208977|gb|EFA83152.1| DNA polymerase zeta catalytic subunit [Polysphondylium pallidum
PN500]
Length = 2058
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 278/557 (49%), Gaps = 39/557 (7%)
Query: 367 RDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDLQNGNAETRRRLAVY 426
R V+ WR E+ D+ NIC L I + ++D N +T R L+ Y
Sbjct: 1439 RIVINIWRLLRHEITIDIYTYQNICFHRLKRRIP--EYSPKTLTDWYNSGCQTWRTLSFY 1496
Query: 427 CLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI- 485
L+ LL I E+ARV G+ +LSRG +V S LLR K +N ++
Sbjct: 1497 -LEHCKGNFDLLYSFDIIGRTSELARVYGIDFFSVLSRGSQFRVESMLLRLTKPENYIMY 1555
Query: 486 -PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---VTP 541
P+ Q ++ V++ + + P+ LDF SLYPSIM+AYN CYST V P
Sbjct: 1556 SPSRDQTTNQPMPESIPLVMDPISKMFNSPVVVLDFQSLYPSIMIAYNYCYSTCLGRVIP 1615
Query: 542 ED---------ARKLNLPP-------ECVNKTPSGETFVKSNLQKGILPEILEELLAARK 585
D + K+N+ P + V+ +P+ + + +KG+ P++L E+L R
Sbjct: 1616 TDPVSHDKNLGSGKINIKPGLLRLLGDNVSVSPNEVMYTNTQTRKGLFPKLLTEVLETRI 1675
Query: 586 RAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQ 643
K +K+ +D + +LD RQLALK+ AN +G+T AT G++ CIEI+ S+ R+
Sbjct: 1676 MIKKAMKKYRDNKKIYNMLDARQLALKMMANVSFGYTAATFSGRMSCIEIADSIVQTARE 1735
Query: 644 MIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTF 703
+E ++ E E A+VIYGDTDS+ V + E A +G++ AD ++
Sbjct: 1736 TLEAAIRIAE------TSKEWRAKVIYGDTDSLFVLLPGVSREEAFVIGQKIADKVTSMN 1789
Query: 704 IKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTE 762
KP+KL FEKVY+P LL +KKRY G + +P + + + D KGIETVRRD C LV ++ +
Sbjct: 1790 PKPVKLIFEKVYHPTLLANKKRYVGYKYESPTQTEPIFDAKGIETVRRDQCKLVSKIMEK 1849
Query: 763 CLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKA---AHVEL 819
+ + +D+ Y+ + R+ L + K + K G +Y A +L
Sbjct: 1850 SIRTLFEKKDLSLVKSYMTRQWQKIFQERVSLKDFIFAKAV-KLG-NYSTNGPLPAAAQL 1907
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPI-YVLENNIPIDTHYYLENQI 878
A+R+ ++D P G+RV +V++ ++ + P Y+ + I+ YY+ QI
Sbjct: 1908 AQRIMEKDPRGEPRYGERVRFVVVYGTPNSRLCDLVVTPHEYMTNKTLRINIFYYITKQI 1967
Query: 879 SKPLLRIFEPILKNASK 895
+ RI + + N K
Sbjct: 1968 LPAMDRILKLVGINIHK 1984
>gi|326633675|gb|ADZ99580.1| DNA polymerase [Equid herpesvirus 2]
gi|326633679|gb|ADZ99582.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 264/522 (50%), Gaps = 54/522 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R RL +YC+KD+ L LL M E+A++ +P
Sbjct: 465 KKEDVSYKEIPHLFRQGPGGRARLGLYCVKDSALVLDLLRYFMTHVEISEIAKIAKIPTR 524
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A ++ ++P + A +E Y+GATV++ GFY P+ +D
Sbjct: 525 RVLTDGQQIRVFSCLLDVAGREGYILPVDRHADAE--GYQGATVIDPSPGFYNTPVLVVD 582
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-------ECVNKTPSGETFVKSNLQKGI 572
FASLYP+I+ A+NLCYST++ P D +L L P E FVK + +
Sbjct: 583 FASLYPTIIQAHNLCYSTMI-PGD--RLCLHPHLGPGDYETFELASGPVHFVKKHKAVSL 639
Query: 573 LPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIE 632
L +L LA RK + +L D + +LD +QLA+K++ N+VYGFTG G LPC++
Sbjct: 640 LATLLNVWLAKRKAIRRELATVSDEAVRTILDKQQLAIKVTCNAVYGFTGVASGILPCLK 699
Query: 633 ISSSVTSYGRQMIEHTKKLVE----DKFTTVGGY------EHNAEVIYGDTDSVMVQFGV 682
I+ +VT GR+M+E++K+ +E + + G + + +VIYGDTDS+ +
Sbjct: 700 IAETVTFQGRRMLENSKRYIEGVTPEGLADILGRRVECAPDASFKVIYGDTDSLFIHCRG 759
Query: 683 PTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
E E A +++ T F+ PIKLE EK + +L++KKRY G+ T D++
Sbjct: 760 YRPEQVTGFCDELAAHMTRTLFVDPIKLEAEKTFKCLILLTKKRYIGMMTT-----DRLL 814
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------V 777
KG++ VR+ C V+ L ++ D + A V
Sbjct: 815 MKGVDLVRKTACRFVQETTKAILDLVMGDEAVRAAAERLCAMRVEEVCARGPPVGFLKVV 874
Query: 778 QYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVGD 836
+ + L +NR+ + L + L++ Y+ + H+ + ++ +R+ P + D
Sbjct: 875 DILNDSYRKLRLNRVPVGQLSFSTELSRPISYYKTLTLPHLVVYHKIMQRNEEL-PQIHD 933
Query: 837 RVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
R+ YV +++ KG E +EDP Y ++NIP Y + I
Sbjct: 934 RIAYVFVQSPKGKLRSEMAEDPAYAAQHNIPPAVDLYFDKVI 975
Score = 106 bits (265), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 159/367 (43%), Gaps = 36/367 (9%)
Query: 45 LDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDI-DYVIG 103
LD D+E+ IL R + + P S+G ++ F DI + V G
Sbjct: 49 LDPVCFVGDKETPILYGDGSRSLWCA--GGRGGPGTSAGQGHAPVALTFHVYDIIETVYG 106
Query: 104 DSNRELLPLSSG-----SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
+ +P S ++++ G T + SVC V E YFY+ P+G+ D +
Sbjct: 107 QDRCDHVPFQFQTDIIPSGTVLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGLKLDFL-- 164
Query: 159 FHQILEGRMREANR-NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCR 217
+++ +R N Q E KR + Y + + + + AS +
Sbjct: 165 --------IQQCSRENFNFSQGRYRYEKTSKRVLREYCVEAREVY--------RVFASSQ 208
Query: 218 GILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT-AKTLSYC 276
G +D + GL +E+NV A RF+ID W R+ A S+
Sbjct: 209 GFVD--LLAGGLTAAGCEVFETNVDAARRFIIDNGFSTFGWYSCAAAVPRQGGAARDSWT 266
Query: 277 QLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLVT 334
+LE+DC D+ ++ + +LSFDIEC G G FP + D ++Q++ ++
Sbjct: 267 ELEYDCAAGDLEFHAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMILQISCVIW 322
Query: 335 LQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFD 394
G + ++ L +C I GV+V +E D+L + IR+ D + + GYNI FD
Sbjct: 323 KAGSGEAPRSVLLNLGTCEEIEGVEVYQCPSELDLLYLFFTMIRDADVEFVTGYNISNFD 382
Query: 395 LPYLIEK 401
PY+I++
Sbjct: 383 FPYVIDR 389
>gi|9628011|ref|NP_042605.1| DNA polymerase replicative subunit [Equid herpesvirus 2]
gi|1706512|sp|P52367.1|DPOL_EHV2 RecName: Full=DNA polymerase
gi|695181|gb|AAC13796.1| DNA polymerase replicative subunit [Equid herpesvirus 2]
gi|326633647|gb|ADZ99566.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 264/522 (50%), Gaps = 54/522 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R RL +YC+KD+ L LL M E+A++ +P
Sbjct: 465 KKEDVSYKEIPHLFRQGPGGRARLGLYCVKDSALVLDLLRYFMTHVEISEIAKIAKIPTR 524
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A ++ ++P + A +E Y+GATV++ GFY P+ +D
Sbjct: 525 RVLTDGQQIRVFSCLLDVAGREGYILPVDRHADAEG--YQGATVIDPSPGFYNTPVLVVD 582
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-------ECVNKTPSGETFVKSNLQKGI 572
FASLYP+I+ A+NLCYST++ P D +L L P E FVK + +
Sbjct: 583 FASLYPTIIQAHNLCYSTMI-PGD--RLCLHPHLGPGDYETFELASGPVHFVKKHKAVSL 639
Query: 573 LPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIE 632
L +L LA RK + +L D + +LD +QLA+K++ N+VYGFTG G LPC++
Sbjct: 640 LATLLNVWLAKRKAIRRELATVSDEAVRTILDKQQLAIKVTCNAVYGFTGVASGILPCLK 699
Query: 633 ISSSVTSYGRQMIEHTKKLVE----DKFTTVGGY------EHNAEVIYGDTDSVMVQFGV 682
I+ +VT GR+M+E++K+ +E + + G + + +VIYGDTDS+ +
Sbjct: 700 IAETVTFQGRRMLENSKRYIEGVTPEGLADILGRRVECAPDASFKVIYGDTDSLFIHCRG 759
Query: 683 PTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
E E A +++ T F+ PIKLE EK + +L++KKRY G+ T D++
Sbjct: 760 YRPEQVTGFCDELAAHMTRTLFVDPIKLEAEKTFKCLILLTKKRYIGMMTT-----DRLL 814
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------V 777
KG++ VR+ C V+ L ++ D + A V
Sbjct: 815 MKGVDLVRKTACRFVQETTKAILDLVMGDEAVRAAAERLCAMRVEEVCARGPPVGFLKVV 874
Query: 778 QYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVGD 836
+ + L +NR+ + L + L++ Y+ + H+ + ++ +R+ P + D
Sbjct: 875 DILNDSYRKLRLNRVPVGQLSFSTELSRPISYYKTLTLPHLVVYHKIMQRNEEL-PQIHD 933
Query: 837 RVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
R+ YV +++ KG E +EDP Y ++NIP Y + I
Sbjct: 934 RIAYVFVQSPKGKLRSEMAEDPAYAAQHNIPPAVDLYFDKVI 975
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 143/314 (45%), Gaps = 32/314 (10%)
Query: 92 MFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGM 151
++ Q D+V +++P S ++++ G T + SVC V E YFY+ P+G+
Sbjct: 104 VYGQDRCDHVPFQFQTDIIP----SGTVLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGL 159
Query: 152 GPDDISHFHQILEGRMREANR-NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALP 210
D + +++ +R N Q E KR + Y + + +
Sbjct: 160 KLDFL----------IQQCSRENFNFSQGRYRYEKTSKRVLREYCVEAREVY-------- 201
Query: 211 TMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT- 269
+ AS +G +D + GL +E+NV A RF+ID W R+
Sbjct: 202 RVFASSQGFVD--LLAGGLTAAGCEVFETNVDAARRFIIDNGFSTFGWYSCAAAVPRQGG 259
Query: 270 AKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VI 327
A S+ +LE+DC D+ ++ + +LSFDIEC G G FP + D ++
Sbjct: 260 AARDSWTELEYDCAAGDLEFHAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMIL 315
Query: 328 QVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIG 387
Q++ ++ G + ++ L +C I GV+V +E D+L + IR+ D + + G
Sbjct: 316 QISCVIWKAGSGEAPRSVLLNLGTCEEIEGVEVYQCPSELDLLYLFFTMIRDADVEFVTG 375
Query: 388 YNICKFDLPYLIEK 401
YNI FD PY+I++
Sbjct: 376 YNISNFDFPYVIDR 389
>gi|9631199|ref|NP_047983.1| DNA polymerase [Ateline herpesvirus 3]
gi|4019235|gb|AAC95533.1| DNA polymerase [Ateline herpesvirus 3]
Length = 1009
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 282/550 (51%), Gaps = 74/550 (13%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEM---ARVTGV 456
+KEDV + I L E R ++ YC+ D+ L +LL MF +VE+ A++ +
Sbjct: 457 KKEDVSYKDILPLFMSGPEGRAKIGRYCVIDSVLVLKLL---MFFKTHVEISEIAKLAKI 513
Query: 457 PISFLLSRGQSIKVLSQLLRKAKQKNLVIP---NVKQAGSEQGTYEGATVLEARAGFYEK 513
P +L+ GQ I+V S LL A+ +N ++P NV G ++GATV+ GFY
Sbjct: 514 PTRRVLTDGQQIRVFSCLLAAARAENYILPVSNNVNTDG-----FQGATVITPIPGFYNN 568
Query: 514 PIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETF---------V 564
+ +DFASLYPSI+ A+NLCYSTL+ P ++ N P K+ ETF V
Sbjct: 569 AVLVVDFASLYPSIIQAHNLCYSTLI-PHNSLH-NYP---YLKSSDYETFMLSSGPIHFV 623
Query: 565 KSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGAT 624
K ++Q +L ++L L+ RK + L + +D K +LD +QLA+K++ N+VYGFTG
Sbjct: 624 KKHIQTSLLSKLLTVWLSKRKAIRQKLAQCEDQDTKTILDKQQLAIKVTCNAVYGFTGVA 683
Query: 625 VGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVG---------GYEHNAE--VIYGDT 673
G LPCI I+ +VT GR M+E +K +E+ T V +EH A+ VIYGDT
Sbjct: 684 SGLLPCISIAETVTLQGRTMLEKSKAFIEE-MTPVRLQEIVPHKLNHEHEAKFRVIYGDT 742
Query: 674 DSVMVQFGVPTVEAAMKLGREAADYIS-GTFIKPIKLEFEKVYYPYLLISKKRYAGLYWT 732
DS+ V+ +V+ ++ G A + S F PIKLE EK + LL++KKRY G+
Sbjct: 743 DSLFVECVGYSVDTVVRFGDFLATFTSEKLFNAPIKLESEKTFQCLLLLAKKRYIGILSN 802
Query: 733 NPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQY------------- 779
DK+ KG++ VR+ C V+ ++ L+ IL D ++ A Q
Sbjct: 803 -----DKLLMKGVDLVRKTACKFVQKTSSKILNLILKDPEVKAAAQLLSKKDPDYAFREG 857
Query: 780 -----------VKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVK-AAHVELAERMRKRD 827
+ + +L ++ + L + L++ Y+ + H+ + +++ KR
Sbjct: 858 LPDGFLKVIDILNESYENLRTGKVSMDDLTFSTELSRPISSYKTENLPHLTVYKKIIKRQ 917
Query: 828 AATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
P + DR+PYV + + +EDP Y +++NIPI Y + I + I +
Sbjct: 918 EE-PPQIHDRIPYVFVGKTATCIS-TMAEDPTYAVQHNIPIARDLYFDKLIHG-VANIIQ 974
Query: 888 PILKNASKEL 897
+ K+++K +
Sbjct: 975 CLFKDSNKTV 984
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 155/325 (47%), Gaps = 41/325 (12%)
Query: 89 QSIMFQQLDIDYVIGDSNR----------ELLPLSSGSAAIIRIFGVTREGHSVCCKVHG 138
QSI F DI +R +++P + ++++ G T +G SVC V G
Sbjct: 86 QSITFHIYDIVETTYSEDRCNDVPFKFQTDIIP----NGTVLKLLGRTLDGASVCANVFG 141
Query: 139 FEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQK 198
+ YFY+ P+G +I++ M++A P+ E+V+K+ + Y +
Sbjct: 142 QKIYFYVKVPEG---GNITYL-------MKQALNEKLGPRCSYQTELVKKKILSRYDPDE 191
Query: 199 SQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNW 258
+ F + + ++ ++ G ++ +E+NV RF+ID N W
Sbjct: 192 HEVFKVTISSSHSVYKVSDYLVANGCEI----------FETNVDAIRRFIIDNNFSTFGW 241
Query: 259 IEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHF 318
+R T + SY +EFDC Y+D+ E ++ P+ I++FDIEC G KG F
Sbjct: 242 YTCKSACFRTTNRD-SYTDIEFDCGYNDL---EFHAERTEWPPYNIMAFDIECIGEKG-F 296
Query: 319 P--EPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDF 376
P + D +IQ++ + G +++L +CA + +V F +E D+L +
Sbjct: 297 PCAKNEGDLIIQISCVFWQVGTPDTTKNMLLSLGTCAAVEDSEVYEFPSEADMLHGFFTI 356
Query: 377 IREVDPDVMIGYNICKFDLPYLIEK 401
+R+ + +++ GYNI FDLPYLI++
Sbjct: 357 LRDFNVEIITGYNISNFDLPYLIDR 381
>gi|326633681|gb|ADZ99583.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 264/522 (50%), Gaps = 54/522 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R RL +YC+KD+ L LL M E+A++ +P
Sbjct: 465 KKEDVSYKEIPHLFRQGPGGRARLGLYCVKDSALVLDLLRYFMTHVEISEIAKIAKIPTR 524
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A ++ ++P + A +E Y+GATV++ GFY P+ +D
Sbjct: 525 RVLTDGQQIRVFSCLLDVAGREGYILPVDRHADAEG--YQGATVIDPSPGFYNTPVLVVD 582
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-------ECVNKTPSGETFVKSNLQKGI 572
FASLYP+I+ A+NLCYST++ P D +L L P E FVK + +
Sbjct: 583 FASLYPTIIQAHNLCYSTMI-PGD--RLCLHPHLGPGDYETFELASGPVHFVKKHKAVSL 639
Query: 573 LPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIE 632
L +L LA RK + +L D + +LD +QLA+K++ N+VYGFTG G LPC++
Sbjct: 640 LATLLNVWLAKRKAIRRELATVSDEAVRTILDKQQLAIKVTCNAVYGFTGVASGILPCLK 699
Query: 633 ISSSVTSYGRQMIEHTKKLVE----DKFTTVGGY------EHNAEVIYGDTDSVMVQFGV 682
I+ +VT GR+M+E++K+ +E + + G + + +VIYGDTDS+ +
Sbjct: 700 IAETVTFQGRRMLENSKRYIEGVTPEGLADILGRRVECAPDASFKVIYGDTDSLFIHCRG 759
Query: 683 PTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
E E A +++ T F+ PIKLE EK + +L++KKRY G+ T D++
Sbjct: 760 YRPEQVTGFCDELAAHMTRTLFVDPIKLEAEKTFKCLILLTKKRYIGMMTT-----DRLL 814
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------V 777
KG++ VR+ C V+ L ++ D + A V
Sbjct: 815 MKGVDLVRKTACRFVQETTKAILDLVMGDEAVRAAAERLCAMRVEEVCARGPPVGFLKVV 874
Query: 778 QYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVGD 836
+ + L +NR+ + L + L++ Y+ + H+ + ++ +R+ P + D
Sbjct: 875 DILNDSYRKLRLNRVPVGQLSFSTELSRPISYYKTLTLPHLVVYHKIMQRNEEL-PQIHD 933
Query: 837 RVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
R+ YV +++ KG E +EDP Y ++NIP Y + I
Sbjct: 934 RIAYVFVQSPKGKLRSEMAEDPAYAAQHNIPPAVDLYFDKVI 975
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 160/367 (43%), Gaps = 36/367 (9%)
Query: 45 LDETLLPEDEESLILRDIEQRQDFASRLAKWARPPLSSGYVSQCQSIMFQQLDI-DYVIG 103
LD D+E+ IL R +++ P S+G ++ F DI + V G
Sbjct: 49 LDPVCFVGDKETPILYGDGSRSLWSA--GGRGGPGTSAGQGHTPVALTFHVYDIIETVYG 106
Query: 104 DSNRELLPLSSG-----SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH 158
+ +P S ++++ G T + SVC V E YFY+ P+G+ D +
Sbjct: 107 QDRCDHVPFQFQTDIIPSGTVLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGLKLDFL-- 164
Query: 159 FHQILEGRMREANR-NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCR 217
+++ +R N Q E KR + Y + + + + AS +
Sbjct: 165 --------IQQCSRENFNFSQGRYRYEKTSKRVLREYCVEAREVY--------RVFASSQ 208
Query: 218 GILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT-AKTLSYC 276
G +D + GL +E+NV A RF+ID W R+ A S+
Sbjct: 209 GFVD--LLAGGLTAAGCEVFETNVDAARRFIIDNGFSTFGWYSCAAAVPRQGGAARDSWT 266
Query: 277 QLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLVT 334
+LE+DC D+ ++ + +LSFDIEC G G FP + D ++Q++ ++
Sbjct: 267 ELEYDCAAGDLEFHAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMILQISCVIW 322
Query: 335 LQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFD 394
G + ++ L +C I GV+V +E D+L + IR+ D + + GYNI FD
Sbjct: 323 KAGSGEAPRSVLLNLGTCEEIEGVEVYQCPSELDLLYLFFTMIRDADVEFVTGYNISNFD 382
Query: 395 LPYLIEK 401
PY+I++
Sbjct: 383 FPYVIDR 389
>gi|255726064|ref|XP_002547958.1| hypothetical protein CTRG_02255 [Candida tropicalis MYA-3404]
gi|240133882|gb|EER33437.1| hypothetical protein CTRG_02255 [Candida tropicalis MYA-3404]
Length = 1634
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 197/669 (29%), Positives = 319/669 (47%), Gaps = 88/669 (13%)
Query: 404 VHHSI--ISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNY-------VEMARVT 454
+HH++ S+ Q +++R + + +Y +R+ + ++ I N VE +R+
Sbjct: 988 LHHTLPKYSNYQLSQWLSKKRFSDIVIVLSYYTERV-NTILKIINVQELITRNVEHSRLI 1046
Query: 455 GVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEG------ATVLEARA 508
G+ + RG K+ S L R AK ++L++ + S+Q +E +LE ++
Sbjct: 1047 GIEFNSNFYRGSQFKIESILSRIAKPESLLL----NSPSKQDVHEMRPIECIPLILEPKS 1102
Query: 509 GFYEKPIATLDFASLYPSIMMAYNLCYSTLV--------TPEDA---RKLNLPP------ 551
FY+ P+ LDF SLYPSIM+AYN CYSTL+ + D + L L P
Sbjct: 1103 NFYKSPLVVLDFQSLYPSIMIAYNYCYSTLLCKLHNYKPSKNDIGYLKNLKLAPGLVDLL 1162
Query: 552 ---ECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVL-DGRQ 607
+ VN +P+G FVKS+++K IL ++LEE+L R + K +K KD E L + RQ
Sbjct: 1163 IKEDGVNISPNGFVFVKSHIRKSILAKMLEEILNIRIKVKEVMKLFKDDTELTRLYNARQ 1222
Query: 608 LALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNA 666
LALK+ AN YG+T AT G++P +IS ++ S GR+++ + +++E G Y A
Sbjct: 1223 LALKLIANVTYGYTSATFSGRMPNSDISDAIVSTGREILNKSIQMIE-----AGKY--GA 1275
Query: 667 EVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRY 726
+V+YGDTDS+ V F + A LG+ A I+ F P+KL+FEKVY+P +L++KKRY
Sbjct: 1276 KVVYGDTDSLFVYFPGKSKSEAFILGKAIAKEITDFFPDPVKLKFEKVYHPCVLLAKKRY 1335
Query: 727 AGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTIS 785
G Y + K D KGIETVRRD + + L + +++ +Y
Sbjct: 1336 VGYSYEYEDQAVPKFDAKGIETVRRDGIPAQSKMTEKTLRILFETKNLSKVKKYTIEQFH 1395
Query: 786 DLLMNRMDLSLLVITKGL---TKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVI 842
++MN++ + K + T + + A + A +M + D P +RVPYV+
Sbjct: 1396 KVMMNKVSVKDFCFAKEVRYGTYKNEKHLPPGALI--ASKMVEEDPRKEPQYRERVPYVV 1453
Query: 843 IKAAKGAKAYER---SEDPIYVLENNIP--IDTHYYLENQISKPLLRIFEPILKNASKEL 897
K + +R E+ I + N P +D YY+ + PL RIF
Sbjct: 1454 YKDITKPRIKDRCITPEEFINSYQTNKPYELDAEYYITRVLVPPLERIFN---------- 1503
Query: 898 LSGDHTRSISISTP-SNSG--IMKFAKRQLSCIGC-KALISNGTLCSHCKGREAELYCKT 953
L G + P SN G I A C+ C K+L +G +C C +L
Sbjct: 1504 LIGVDVQGWYKQIPKSNRGIDIRHHAAYADVCLICGKSLDCSGNICESCFQDGQQLITDI 1563
Query: 954 VSQVQELEVLFGRLWTQCQECQGSLHQDV-----------LCTSRDCPIFYRRKKAQKDM 1002
+ E L C++C +H+ + C + DC ++Y + K +
Sbjct: 1564 NMTTHDTETKIIELENTCRDC---VHRAIKPGTKISEYTDSCINGDCSVYYNKSKLNNES 1620
Query: 1003 AEAKLQLDR 1011
+ + D+
Sbjct: 1621 RQVFSKRDK 1629
>gi|326633677|gb|ADZ99581.1| DNA polymerase [Equid herpesvirus 2]
Length = 1008
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 264/522 (50%), Gaps = 54/522 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R RL +YC+KD+ L LL M E+A++ +P
Sbjct: 465 KKEDVSYKEIPHLFRQGPGGRARLGLYCVKDSALVLDLLRYFMTHVEISEIAKIAKIPTR 524
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A ++ ++P + A +E Y+GATV++ GFY P+ +D
Sbjct: 525 RVLTDGQQIRVFSCLLDVAGREGYILPVDRHADAE--GYQGATVIDPSPGFYNTPVLVVD 582
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-------ECVNKTPSGETFVKSNLQKGI 572
FASLYP+I+ A+NLCYST++ P D +L L P E FVK + +
Sbjct: 583 FASLYPTIIQAHNLCYSTMI-PGD--RLCLHPHLGPGDYETFELASGPVHFVKKHKAVSL 639
Query: 573 LPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIE 632
L +L LA RK + +L D + +LD +QLA+K++ N+VYGFTG G LPC++
Sbjct: 640 LATLLNVWLAKRKAIRRELATVSDEAVRTILDKQQLAIKVTCNAVYGFTGVASGILPCLK 699
Query: 633 ISSSVTSYGRQMIEHTKKLVE----DKFTTVGGY------EHNAEVIYGDTDSVMVQFGV 682
I+ +VT GR+M+E++K+ +E + + G + + +VIYGDTDS+ +
Sbjct: 700 IAETVTFQGRRMLENSKRYIEGVTPEGLADILGRRVECAPDASFKVIYGDTDSLFIHCRG 759
Query: 683 PTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
E E A +++ T F+ PIKLE EK + +L++KKRY G+ T D++
Sbjct: 760 YRPEQVTGFCDELAAHMTRTLFVDPIKLEAEKTFKCLILLTKKRYIGMMTT-----DRLL 814
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------V 777
KG++ VR+ C V+ L ++ D + A V
Sbjct: 815 MKGVDLVRKTACRFVQETTKAILDLVMGDEAVRAAAERLCAMRVEEVCARGPPVGFLKVV 874
Query: 778 QYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVGD 836
+ + L +NR+ + L + L++ Y+ + H+ + ++ +R+ P + D
Sbjct: 875 DILNDSYRKLRLNRVPVGQLSFSTELSRPISYYKTLTLPHLVVYHKIMQRNEEL-PQIHD 933
Query: 837 RVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
R+ YV +++ KG E +EDP Y ++NIP Y + I
Sbjct: 934 RIAYVFVQSPKGKLRSEMAEDPAYAAQHNIPPAVDLYFDKVI 975
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 143/314 (45%), Gaps = 32/314 (10%)
Query: 92 MFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGM 151
++ Q D+V +++P S ++++ G T + SVC V E YFY+ P+G+
Sbjct: 104 VYGQDRCDHVPFQFQTDIIP----SGTVLKLLGRTSDDRSVCVNVFRQELYFYVRVPEGL 159
Query: 152 GPDDISHFHQILEGRMREANR-NSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALP 210
D + +++ +R N Q E KR + Y + + +
Sbjct: 160 KLDFL----------IQQCSRENFNFSQGRYRYEKTSKRVLREYCVEAREVY-------- 201
Query: 211 TMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKT- 269
+ AS +G +D + GL +E+NV A RF+ID W R+
Sbjct: 202 RVFASSQGFVD--LLAGGLTAAGCEVFETNVDAARRFIIDNGFSTFGWYSCAAAVPRQGG 259
Query: 270 AKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VI 327
A S+ +LE+DC D+ ++ + +LSFDIEC G G FP + D ++
Sbjct: 260 AARDSWTELEYDCAAGDLEFHAGRADWPG---YNVLSFDIECLGENG-FPNASRDEDMIL 315
Query: 328 QVANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIG 387
Q++ ++ G + ++ L +C I GV+V +E D+L + IR+ D + + G
Sbjct: 316 QISCVIWKAGSGEAPRSVLLNLGTCEEIEGVEVYQCPSELDLLYLFFTMIRDADVEFVTG 375
Query: 388 YNICKFDLPYLIEK 401
YNI FD PY+I++
Sbjct: 376 YNISNFDFPYVIDR 389
>gi|88604880|gb|ABD46760.1| REV3 [Neurospora crassa]
Length = 1926
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 160/493 (32%), Positives = 251/493 (50%), Gaps = 32/493 (6%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L +L+K I E AR+ GV + SRG KV S + R AK +N ++
Sbjct: 1144 YYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1203
Query: 486 PNV--KQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P+ K G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1204 PSPSRKHVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIV 1263
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L + +N P+G + K +++K +L ++ E+L R
Sbjct: 1264 SWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMSTEILETRIMV 1323
Query: 588 KADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+ +
Sbjct: 1324 KSGMKQDKDDRAIQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETL 1383
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E + +V + +A+V+YGDTDS+ V T E A ++G+E AD ++ +
Sbjct: 1384 ERAIAFIH----SVQKW--DADVVYGDTDSLFVSLKGRTREQAFEIGQEIADAVTKLNPR 1437
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + + D KGIETVRRD + + + L
Sbjct: 1438 PVKLKFEKVYHPCVLLAKKRYVGYKYESRDQTVPVFDAKGIETVRRDGTPAEQRIEEKAL 1497
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVELA 820
+ D+ Y + ++ + + + G T A +A
Sbjct: 1498 KILFETADLSQVKSYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGALIA 1557
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQIS 879
+ K DA P G+RVPYV++ A G + +R +P +L N + +D YY+ I
Sbjct: 1558 TKKMKEDARAEPQYGERVPYVVMAGAPGMRLVDRCVEPEELLNNAHATLDADYYINKNII 1617
Query: 880 KPLLRIFEPILKN 892
PL RIF + N
Sbjct: 1618 PPLERIFNLVGAN 1630
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
+ +IR+FG T +G VC +HG PY Y+ + P+ H + ++ R+
Sbjct: 37 AAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDGNLEPNKD---HALAISYRKDPIRD 93
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLDGLGMK 232
P++V I + + I +Y F LKI + P +++ +L +G+ + +
Sbjct: 94 R--PKYVARISLT--KGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMSRI--- 146
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F YE+++ + L+FM D N+ G N+++ + +R
Sbjct: 147 -FQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFR 180
Score = 44.7 bits (104), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L ++V E + + CQ C G +L ++V C S+DCP+FY R
Sbjct: 1759 LCHRCASDPPTLMVDMQAKVNRAEKSYVEIMKVCQSCAGFALSEEVPCDSKDCPVFYSRV 1818
Query: 997 KAQKDMAEAK 1006
K + + K
Sbjct: 1819 KQRTKVTAVK 1828
>gi|302419923|ref|XP_003007792.1| DNA polymerase zeta catalytic subunit [Verticillium albo-atrum
VaMs.102]
gi|261353443|gb|EEY15871.1| DNA polymerase zeta catalytic subunit [Verticillium albo-atrum
VaMs.102]
Length = 1611
Score = 238 bits (608), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 202/693 (29%), Positives = 314/693 (45%), Gaps = 81/693 (11%)
Query: 365 TERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHS---IISDLQNGNAETRR 421
T R ++ WR E++ ++ Y++ + +L+ + H+S + ++G
Sbjct: 936 TGRHMINVWRAMRGELN---LLQYSMENV-VWHLLHRRIPHYSWSTLTKWYKSGMHRDMS 991
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
+L Y L L +++ I E AR+ GV + SRG KV S + R AK +
Sbjct: 992 KLMRYYLSRTRLDIDIIEANELIPRTSEQARLLGVDFFSVFSRGSQYKVESIMFRIAKPE 1051
Query: 482 N--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N LV P+ +Q G + V+E ++ FY P+ LDF SLYPS+M+AYNLCYST +
Sbjct: 1052 NFILVSPSRQQVGGQNALECLPLVMEPQSAFYSSPVLVLDFQSLYPSVMIAYNLCYSTFL 1111
Query: 540 T----------------PEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
R L L + +N TP+G F K ++K +L ++L E+L
Sbjct: 1112 GRITNWRGMNKMGFTEYKRHQRLLELLKDHINITPNGMMFAKPEIRKSLLAKMLGEILET 1171
Query: 584 RKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ G
Sbjct: 1172 RVMVKSGMKQDKDDRSLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTG 1231
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E + + NAEV+YGDTDS+ + T + A +G E A I+
Sbjct: 1232 RETLERAIAFIHSQ------ERWNAEVVYGDTDSLFIHLKGSTKDQAFDIGNEIAKEITD 1285
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL--VKNL 759
+P+KL+FEKVY+P +L++KKRY G + + + + T R N L VK
Sbjct: 1286 MNPRPVKLKFEKVYHPCVLLAKKRYVGYKYES-----RTRSSPTLTPRHRNADLSQVKAY 1340
Query: 760 VTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
KI+ GAV +I D + KG G K
Sbjct: 1341 FQAQCEKIMR-----GAV-----SIQDFCFAKEVKLGSYSDKGPPPPGAMISTK------ 1384
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL-ENNIPIDTHYYLENQI 878
RM + DA P G+RVPYV++ A GA+ +R P +L ++ +D YY+ +
Sbjct: 1385 --RMLE-DARAEPQYGERVPYVVVTGAPGARLIDRCVAPETLLRDSQSQLDAEYYISKNL 1441
Query: 879 SKPLLRIFEPILKNASK--------------ELLSGDHTR-----SISISTPSNSGIMKF 919
PL RIF + N + E +G TR ++ ++
Sbjct: 1442 IPPLERIFNLVGANVRQWYDDMPKVQRVRRLEQRTGAATRLGQGLGQGQGQGTSRKTLES 1501
Query: 920 AKRQLSCIGCKALIS-NGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-S 977
+ SCI C + GTLC C+ S++ E + + C+ C
Sbjct: 1502 YMKSASCIVCDVKMKVEGTLCERCRSDVPPSILNLQSRLMREEKRYLDVVKLCRSCAVLP 1561
Query: 978 LHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLD 1010
DV C S+DCP+FY R K +A + L+
Sbjct: 1562 PLDDVACDSKDCPVFYSRVKQATRLAAERSVLE 1594
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 27/173 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHF---------HQI-LEGRMR 168
I+R FG T G VC +HG PY Y+ + D++ + H + + R
Sbjct: 42 IVRAFGSTETGQKVCAHIHGAFPYMYVEYSGSLEQDEVGAYIYRLHLSIDHALAVSYRRD 101
Query: 169 EANRNSKVPQFVRHIEMVQKRSIMYYQ-QQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
+ +RN+K FV I +V + I +Y + FLKI + P ++ + +G+ +
Sbjct: 102 QYSRNAK---FVARITLV--KGIPFYGFHVGYRFFLKIYMFNPIVMTRLADLFQQGVIMK 156
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIE-------VPVGKYRKTAKTL 273
+ F YE+++ + L+FM D N+ G +++ PV +Y + +L
Sbjct: 157 ----RKFQPYEAHLQYLLQFMTDFNLYGCGFLDASTVHFRAPVPRYTEEGNSL 205
>gi|326481837|gb|EGE05847.1| polymerase zeta subunit [Trichophyton equinum CBS 127.97]
Length = 1651
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 278/556 (50%), Gaps = 56/556 (10%)
Query: 503 VLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LVTPEDARK------------ 546
V+E ++ FY P+ LDF SLYPSIM+AYN CYST +V K
Sbjct: 1080 VMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWRGRNKMGITDYEREPGL 1139
Query: 547 LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKD--PLEKAVLD 604
L L + +N P+G + K ++K +L ++L E+L R K +KE KD PL++ +L+
Sbjct: 1140 LGLLKDQINIAPNGIIYAKQEIRKSLLAKMLTEILETRVMVKNGMKEDKDDRPLQR-LLN 1198
Query: 605 GRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYE 663
RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +E L+ +V +
Sbjct: 1199 NRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTARETLEKAIALIH----SVKRW- 1253
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISK 723
AEV+YGDTDS+ + T A LG E A I+ + +P+KL+FEKVY+P +L++K
Sbjct: 1254 -GAEVVYGDTDSLFIYLKGRTRAEAFDLGEEIAKTITDSNPRPVKLKFEKVYHPCVLLAK 1312
Query: 724 KRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS 782
KRY G Y + ++ + D KGIETVRRD + + + L + D+ +Y +
Sbjct: 1313 KRYVGYKYESKNQEKPEFDAKGIETVRRDGTPAEQKIEEKALRLLFETSDLSRVKEYFQK 1372
Query: 783 TISDLLMNRMDLSLLVITK--GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPY 840
S ++ ++ + K L D + A+RM + D P G+RVPY
Sbjct: 1373 QCSKIMRGKVSVQDFCFAKEVKLGTYSDKGAPPPGALISAKRMLE-DPRLEPQYGERVPY 1431
Query: 841 VIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNASK---E 896
V++ A GA+ +R P +L++ + +D YY+ + PL RIF + N + E
Sbjct: 1432 VVVSGAPGARLIDRCFPPEVLLQDPQLELDAEYYISKNLIPPLERIFNLVGANVRQWYDE 1491
Query: 897 LLSGDHTRSI--SISTPS-------NSGIMKFA----KRQLSCIGCKALISN-------G 936
+ R +++TP+ N+ + K R SC+ C++ +++
Sbjct: 1492 MPKYQRMRRTEGAMNTPAGRSGQDGNNAMFKKTLESYMRSSSCVVCRSKLNSEEQRQQKE 1551
Query: 937 TLCSHCKGREAEL-YCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYR 994
+C+ C ++ L K ++ E E L C+ C G +++ C S+DCP+FY
Sbjct: 1552 AICNVCLRQQPHLSLLKLEYRMHESERRVANLQDVCRSCMGVGWGEEIKCDSKDCPVFYS 1611
Query: 995 RKKAQKDMAEAKLQLD 1010
R + D+ + L+
Sbjct: 1612 RMRQTSDLGHTRALLE 1627
>gi|11096177|gb|AAG30223.1| DNA polymerase zeta catalytic subunit [Drosophila melanogaster]
Length = 2130
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 186/605 (30%), Positives = 284/605 (46%), Gaps = 55/605 (9%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGSEQGTYEGATVLEA 506
EMA++ G+ +LSRG +V S +LR AK KNLV P+V+ + A ++E
Sbjct: 1534 EMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQARAHMRAPEYLALIMEP 1593
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---------------------VTPEDAR 545
++ FY P+ LDF SL+PS+++AYN C+ST V+ + +
Sbjct: 1594 QSRFYADPLIVLDFQSLHPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQMLQ 1653
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLD 604
KL L + V +P G FVK +++GILP +L E+L R+ K +K KD + +L
Sbjct: 1654 KL-LEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHKDSSALQRILH 1712
Query: 605 GRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYE 663
RQL LK+ AN YG+T A G++P +E+ SV S GR+ +E KLVE+ E
Sbjct: 1713 SRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSVVSKGRETLERAIKLVEN------NEE 1766
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISK 723
V+YGDTDS+ V A ++G E A ++ +P+KL+ EKVY P +L +K
Sbjct: 1767 WKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAKAVTEMNPQPVKLKLEKVYQPCMLQTK 1826
Query: 724 KRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS 782
KRY G +Y T ++ + KGIET RRD C V ++ + L + +D+ YV
Sbjct: 1827 KRYVGYMYETADQEQPVYEAKGIETERRDGCPAVAKMLEKVLRILFETQDVSKIKAYVCR 1886
Query: 783 TISDLLMNRMDLSLLVITK---GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVP 839
+ LL R +L L+ K GL V A +EL + ++D P G+RVP
Sbjct: 1887 QFTKLLSGRANLQDLIFAKEFRGLNGYKPTACVPA--LELTRKWMQKDPRHVPRRGERVP 1944
Query: 840 YVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNAS---- 894
++I+ G + P +L N I+ YY+ I PL R I N
Sbjct: 1945 FIIVNGPPGMQLIRLVRSPHDILANEGHKINAIYYITKAIIPPLNRCLLLIGANVHDWFA 2004
Query: 895 ----KELLSGDHTRSISISTP--SNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGREAE 948
K L++ + ++ P + S I ++ I C G +C C
Sbjct: 2005 SLPRKLLMTPAVGTANELAGPRGAKSTISQYFSTTSCVIDCGRQTKAG-ICPDCLKNATT 2063
Query: 949 LYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQ 1008
+ LE + CQ C G L + C S DCP+ Y + ++++ Q
Sbjct: 2064 CVVVLSDKTARLERGYQLTRQICQACCGRLG-SLQCDSLDCPVLYVLEGKRRELQ----Q 2118
Query: 1009 LDRWN 1013
++ WN
Sbjct: 2119 IEHWN 2123
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------- 170
+IR+FG G C VHG PY YI P D F + G ++ A
Sbjct: 47 VIRVFGGNSRGQKTCMHVHGVFPYLYI-------PYDKKDFESLERGILQMAVHLDKAIN 99
Query: 171 ---NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
+ S Q V I++V+ Y + + Q FLKI + P V +L G L
Sbjct: 100 ISLGQGSSNAQHVFKIQLVKGIPFYGYHRVEHQ-FLKIYMFNPRFVRRAANLLQSGAILS 158
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP--VGKYRKT 269
K+F +ES+V + L+FMID N+ G +++ VP V K+R+
Sbjct: 159 ----KNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRN 198
>gi|88604882|gb|ABD46761.1| REV3 [Neurospora crassa]
Length = 1926
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 161/493 (32%), Positives = 251/493 (50%), Gaps = 32/493 (6%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L +L+K I E AR+ GV + SRG KV S + R AK +N ++
Sbjct: 1144 YYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLL 1203
Query: 486 PNV--KQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P+ KQ G++ V+E ++ FY P+ LDF SLYPS+M+AYN CYST +V
Sbjct: 1204 PSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIV 1263
Query: 540 TPEDARK------------LNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ K L+L + +N P+G + K +++K +L ++L E+L R
Sbjct: 1264 SWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMV 1323
Query: 588 KADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K+ +K+ D + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ GR+ +
Sbjct: 1324 KSGMKQDMDDRAIQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETL 1383
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E + +V + +AEV+YGDTDS+ V T E A ++G+E AD ++ +
Sbjct: 1384 ERAIAFIH----SVQKW--DAEVVYGDTDSLFVSLKGRTREQAFEIGQEIADAVTKLNPR 1437
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + + D KGIETVRRD + + + L
Sbjct: 1438 PVKLKFEKVYHPCVLLAKKRYVGYKYESRDQTVPVFDAKGIETVRRDGTPAEQRIEEKAL 1497
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK----GLTKTGDDYEVKAAHVELA 820
+ D+ Y + ++ + + + G T A +A
Sbjct: 1498 KILFETADLSQVKSYFQEQCHKIMRGAVSVQDFCFAREVKLGTYSTSGRGGPAPAGALIA 1557
Query: 821 ERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQIS 879
+ K DA P G+RV YV++ A G + +R +P +L N + +D YY+ I
Sbjct: 1558 TKKMKEDARAEPQYGERVTYVVMAGAPGMRLVDRCVEPEELLNNAHATLDADYYINKNII 1617
Query: 880 KPLLRIFEPILKN 892
PL RIF + N
Sbjct: 1618 PPLERIFNLVGAN 1630
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 114 SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRN 173
+ +IR+FG T +G VC +HG PY Y+ + P+ H + ++ R+
Sbjct: 37 AAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDGNLEPNKD---HALAISYRKDPIRD 93
Query: 174 SKVPQFVRHIEMVQKRSIMYYQQQKSQPF-LKIVVALPTMVASCRGILDRGIQLDGLGMK 232
P++V I + + I +Y F LKI + P +++ +L +G+ + +
Sbjct: 94 R--PKYVTRISLT--KGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMS----R 145
Query: 233 SFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
F YE+++ + L+FM D N+ G N+++ + +R
Sbjct: 146 KFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFR 180
Score = 44.7 bits (104), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 938 LCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG-SLHQDVLCTSRDCPIFYRRK 996
LC C L ++V E + + CQ C G +L ++V C S+DCP+FY R
Sbjct: 1759 LCHRCASDPPTLMVDMQAKVNRAEKSYVEIMKVCQSCAGFALSEEVPCDSKDCPVFYSRV 1818
Query: 997 KAQKDMAEAK 1006
K + + K
Sbjct: 1819 KQRTKVTAVK 1828
>gi|325186586|emb|CCA21132.1| DNA polymerase zeta catalytic subunit putative [Albugo laibachii
Nc14]
Length = 1726
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 189/657 (28%), Positives = 311/657 (47%), Gaps = 79/657 (12%)
Query: 420 RRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAK 479
R ++ + LK A + +L+ ++ FI EMAR+ G+ +LSRG +V + +LR K
Sbjct: 1068 RWKMLNHLLKRAIMNLKLMSRMQFITRSSEMARLFGIDFYSVLSRGSQFRVEAVMLRVTK 1127
Query: 480 QKNLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST 537
+KN V+ P+ Q ++ V+E ++ +Y P+ LDF SLYPS+++AYNLCYST
Sbjct: 1128 RKNFVLLSPSRNQVAAQAPMECIPLVMEPQSRYYSDPVVVLDFQSLYPSLVIAYNLCYST 1187
Query: 538 L-------VTPE------------DARKLNLPPECVNKTPSGETFVKSNLQKGILPEILE 578
++P+ D + + ++ P+G F + ++G L ILE
Sbjct: 1188 YFGRLENGMSPKLETSMGVTSFSPDEKGFLTCDQDIHIAPNGTLFCPKSHRQGALSAILE 1247
Query: 579 ELLAARKRAKADLKEA------KDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCI 631
E+LA R K +K++ K+ +K LD RQLALK+ AN YG+T A G++PC
Sbjct: 1248 EILATRIMIKHAMKKSNFSGHSKNLFKK--LDARQLALKLIANVTYGYTAAGFSGRMPCA 1305
Query: 632 EISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKL 691
+++ ++ GR +E T ++VE E NA V+YGDTDS+ V + A +
Sbjct: 1306 QLADAIVQTGRCTLEGTVRVVESH------AEWNARVVYGDTDSLFVLLKGRSRNEAFCI 1359
Query: 692 GREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEK-FDKMDTKGIETVRR 750
G++ A I+ +P++L+ EKVY +L+SKKRY G + P++ ++D KG+E VRR
Sbjct: 1360 GQDIAQTITALNPRPVELKMEKVYSDCILVSKKRYVGQKYEIPDQTHGELDAKGVEIVRR 1419
Query: 751 DNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGL---TKTG 807
D+C LV+ ++ L + D+ + + +L N++ L + K + T +
Sbjct: 1420 DSCELVQKIMRTTLRLLFETHDLSRVKGAIMNLRRQMLNNQVPLRDYIFAKEVRLGTYSD 1479
Query: 808 DDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP 867
+ + AA V L + D P +RVPYV+I GA+ + P Y N
Sbjct: 1480 NSHVPPAALVSL--KAMASDPRAEPRHAERVPYVVINGFPGARLIDLVISP-YRFAANAH 1536
Query: 868 IDT---HYYLENQISKPLLRIF-----------EPILKNASK---------ELLSGDHTR 904
DT YY+E QI L R+F + + SK E L +
Sbjct: 1537 GDTINYQYYIEKQIIPSLERLFLLVGVSIRDWFAGLSRMNSKASPDASIDIEDLLQEKIH 1596
Query: 905 SISISTPSNSGIMKFAKRQLSCIGCKALISNGT-----------LCSHCKGREAELYCKT 953
+ TP+NS ++ + C C I +G+ LCS C+ + +
Sbjct: 1597 HLGKYTPTNSKLINSFYKSFRCHLCGGTILSGSKAPSERDRSQNLCSGCQEKAQRSLLQL 1656
Query: 954 VSQVQELEVLFGRLWTQCQECQ--GSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQ 1008
+ +V+ G+L C C + C S CPI+ + +K D+ + L+
Sbjct: 1657 KHREVSRDVILGKLRQLCYLCTEGNAFIWYQTCQSLPCPIWNQSRKLGGDLRQKTLE 1713
Score = 46.2 bits (108), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 23/190 (12%)
Query: 96 LDIDYVIG----DSNRELLPLS-----SGSAAIIRIFGVTREGHSVCCKVHGFEPYFYIS 146
L +DY + D+ LP+S + +IR+FG T G +HG PYFY+
Sbjct: 19 LHVDYYLDAPLPDNELANLPVSPYYQKAHRVPVIRVFGSTPAGQKALVHLHGVLPYFYLR 78
Query: 147 CPQGMGPDDISHFHQILEGRMREANR-------NSKVPQFVRHIEMVQKRSIMYYQQQKS 199
C + +S ++L R+ + N F V + I +Y +
Sbjct: 79 CENDPIFEQLSELQKLLPELARDIEKCFHKKADNPSENSFKIKFSNVIAKGIPFYGYH-N 137
Query: 200 QP--FLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGN 257
QP F++I P +L G + + F T+ES+V + L+ D +I G N
Sbjct: 138 QPRLFVQIFYYNPRHSNHLVEMLRSG----EITKRVFQTFESHVPYMLQIFADYHIEGMN 193
Query: 258 WIEVPVGKYR 267
+ + K+R
Sbjct: 194 PLFLSNVKFR 203
>gi|392312971|gb|AFM56565.1| DNA polymerase catalytic subunit [Equid herpesvirus 5]
Length = 1017
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/524 (31%), Positives = 263/524 (50%), Gaps = 54/524 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+DV + I L E R +L YC+KD+ L LL M E+A++ +P
Sbjct: 469 KKDDVSYKEIPHLFRQGPEGRAKLGTYCVKDSALVLDLLKYFMTHVEISEIAKIAKIPTR 528
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A ++ ++P+ + SE Y+GATV++ GFY P+ +D
Sbjct: 529 RVLTDGQQIRVFSCLLDVAGRQGFILPSGNKESSE--GYQGATVIDPTPGFYNTPVLVVD 586
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLN--LPP---ECVNKTPSGETFVKSNLQKGILP 574
FASLYP+I+ A+NLCYST++ P D L+ L P E + FVK + +L
Sbjct: 587 FASLYPTIIQAHNLCYSTMI-PGDQLYLHPHLGPGDYETFELSSGAVHFVKKHKTASLLA 645
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
+L LA RK + L D + +LD +QLA+K++ N+VYGFTG G LPC++I+
Sbjct: 646 TLLNAWLAKRKAIRRALAAEADEATRTILDKQQLAIKVTCNAVYGFTGVASGILPCLKIA 705
Query: 635 SSVTSYGRQMIEHTKKLVE-----------DKFTTVGGYEHNAEVIYGDTDSVMVQFGVP 683
+VT GR+M+E +K+ +E + E + +VIYGDTDS+ +
Sbjct: 706 ETVTFQGRRMLERSKRYIEAVTPEGLAAILQRPVAACDPEASFKVIYGDTDSLFIHCRGY 765
Query: 684 TVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDT 742
+ EA E A +++ T F+ PIKLE EK + +L++KKRY G+ T K+
Sbjct: 766 SPEAVTGFCDELAAHMTHTLFVDPIKLEAEKTFTCLILLTKKRYIGMMTTG-----KVLM 820
Query: 743 KGIETVRRDNCLLVKNLVTECLHKILVD--------------------RDIPGAVQYVKS 782
KG++ VR+ C V+ L +L D R +P V
Sbjct: 821 KGVDLVRKTACKFVQETTKAVLDLVLRDEGVRAAAERLCSMRVEEVYRRGLPAGFLKVVD 880
Query: 783 TISD----LLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVGDR 837
++D L +N + S L + L++ Y+ + H+ + ++ +R+ P + DR
Sbjct: 881 VLNDSYRRLRLNLVPASQLSFSTELSRPISYYKTLTLPHLVVYNKIMQRNEEL-PQIHDR 939
Query: 838 VPYVIIKAAKGAKAYERS---EDPIYVLENNIPIDTHYYLENQI 878
+ YV ++ +KG K +S EDP Y ++ IP Y + +
Sbjct: 940 IAYVFVQPSKGEKCKLKSDLAEDPAYAAQHGIPPAVDLYFDKVV 983
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 148/313 (47%), Gaps = 30/313 (9%)
Query: 92 MFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGM 151
++ Q D+V +++P S ++++ G T + SVC V E YFY P+G+
Sbjct: 107 VYNQDRCDHVPFQFQTDIIP----SGTVLKLLGRTADDRSVCVNVFRQELYFYAEVPEGL 162
Query: 152 GPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPT 211
D I++ RE S Q + +KR + Y + + +
Sbjct: 163 RLD------FIIQQSSREGFGCS---QGRYSYQKTRKRVLKQYSVETREVY--------K 205
Query: 212 MVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+ AS G +D + D L +E+NV A RF+ID W R A
Sbjct: 206 IFASSSGFVD--LLADRLTAAGCEVFETNVDAARRFIIDRGFSTFGWYSCSAAVPRLGAG 263
Query: 272 TLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQV 329
S+ +LE+DC D+ +PE S+ + I+SFDIEC G G FP D ++Q+
Sbjct: 264 RDSWTELEYDCAVGDL-EFYPER--SEWPGYNIMSFDIECMGESG-FPNAARDEDMILQI 319
Query: 330 ANLVTLQGEKQPFIRNVM-TLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGY 388
+ ++ +G K R+++ L +C+PI GV+V +E D+L + IR++D + + GY
Sbjct: 320 SCVIWKEGSKGAAPRSILLNLGTCSPIEGVEVYECPSELDLLYLFLTMIRDMDLEFVTGY 379
Query: 389 NICKFDLPYLIEK 401
NI FD PY++++
Sbjct: 380 NISNFDFPYILDR 392
>gi|15922397|ref|NP_378066.1| DNA polymerase II [Sulfolobus tokodaii str. 7]
gi|342306638|dbj|BAK54727.1| DNA polymerase [Sulfolobus tokodaii str. 7]
Length = 781
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 232/841 (27%), Positives = 377/841 (44%), Gaps = 173/841 (20%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+I I+ + +EG+ V F PYFY D+I +E + SK
Sbjct: 20 VIYIWAIDKEGNRVVLLEKKFRPYFYALVDDNYNIDEIR----------KEILKLSKPYS 69
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPF--LKIVVALPTMVASCRGILDRGIQLDGLGMKSFMT 236
+ I + +K+ P LKI +P V R D ++ G+ KS +
Sbjct: 70 PITSINVEEKKYF-------GSPVRVLKIETVIPAYVRVYR---DEVAKIKGV--KSVL- 116
Query: 237 YESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLS--YCQLEFDCLYSDIISRHPEG 294
E+++ F +R+ ID N+ WIE V + ++ + Y + + LY D
Sbjct: 117 -EADIRFYMRYSIDNNLKPFYWIEAEVEEIKENNFRVKKVYELKKINKLYED-------- 167
Query: 295 EFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP 354
K+ ++L+FDIE + G P P DPVI + + T +G KQ L++
Sbjct: 168 ---KIPELKVLAFDIEVYNKYGS-PNPRRDPVI-IIGVWTKEGGKQFLADKYDDLRAIRE 222
Query: 355 IVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV---------- 404
+ +F++ DPD+++GYNI FD PYL+E+ ++
Sbjct: 223 FI------------------NFVQTYDPDIIVGYNINNFDWPYLLERANIRGIRLDVGRR 264
Query: 405 -----------HHSIISDLQ---NGNAETRRRLAVYCLKD-----AYLPQR--------- 436
H+SI L G A++ + + V L++ LP+
Sbjct: 265 VNGEPSQGVYGHYSITGRLNVDLYGFAQSIQEVKVKTLENIADYLGVLPKEKRTIVEWYD 324
Query: 437 --------------------------LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKV 470
LL ++ F +E+ R++G+P+ L +V
Sbjct: 325 IPKYWDDEKKRDILLKYNLDDAKSAYLLGEVFIPFG-IELTRISGLPLDQLSMASVGHRV 383
Query: 471 LSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMA 530
L+R+A + N +IPN ++ E +YEG V+ G +E + LDF+S+YPSIM+
Sbjct: 384 EWLLMREAYKYNELIPNKEE--REYESYEGGLVISPLPGIHED-VYVLDFSSMYPSIMIK 440
Query: 531 YNLCYSTLVTPEDARKLNLPPECVN--KTPSGETFVKSNLQKGILPEILEELLAARKRAK 588
YN+ TLV E C N +P+G F K G+ +LE+L+ RK K
Sbjct: 441 YNIGPDTLVKGE----------CENCWISPAGHKFRKD--PPGLYKNVLEKLIQERKEVK 488
Query: 589 ADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHT 648
+++ D +K VLD RQ ALK+ AN+ YG+ G + E + +VT++GRQ+I +
Sbjct: 489 KLMEKTMDEYDKRVLDARQRALKVMANAFYGYMGWLGARWYSKEGAEAVTAWGRQIISES 548
Query: 649 KKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIK 708
K+ ++K T VIYGDTDS+ V+ G + IS F IK
Sbjct: 549 AKIAKEKGFT---------VIYGDTDSIFVKGGGDINSLITE--------ISSKFGLEIK 591
Query: 709 LE--FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHK 766
++ +++V++ +KKRYAGL + K+D G E VR D C L K + T +
Sbjct: 592 IDKIYKRVFFTE---NKKRYAGL-----TEDGKIDIVGFEAVRGDWCDLAKQVQTNVIEL 643
Query: 767 ILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKR 826
IL + A++YVK+ I DL + L+I K + K D+Y+V A HV A++ K
Sbjct: 644 ILKSGKVEDAIKYVKTVIFDLRRYNFRIEDLIIWKTIDKNLDEYDVTAPHVVAAKKAAKA 703
Query: 827 DAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIF 886
+ V ++ YVI+K + K +++E P ++++ ID YY++ QI +RI
Sbjct: 704 GYLVSKGV--KIGYVIVKGS--GKISDKAE-PYFLIKEKNKIDVEYYIDKQIIPVAMRIL 758
Query: 887 E 887
E
Sbjct: 759 E 759
>gi|7416107|dbj|BAA93703.1| DNA polymerase B3 [Sulfurisphaera ohwakuensis]
Length = 781
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 234/839 (27%), Positives = 379/839 (45%), Gaps = 169/839 (20%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+I I+ + +EG+ V F PYFY D+I +E + SK
Sbjct: 20 VIYIWVIDKEGNRVVLLEKKFRPYFYALVDDSYNIDEIR----------KEILKLSKPYS 69
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
+ I++ +K+ Y+ LKI +P V R D ++ G +KS + E
Sbjct: 70 PITSIDVEEKK---YFGS--PVKVLKIETVIPAYVRVYR---DEVAKIKG--VKSVL--E 117
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLS--YCQLEFDCLYSDIISRHPEGEF 296
+++ F +R+ ID N+ WIE V + ++ + Y + + LY D
Sbjct: 118 ADIRFYMRYSIDINLKPFYWIEAEVEEIKENNFRVKKVYELKKINKLYED---------- 167
Query: 297 SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIV 356
K+ ++L+FDIE + G P P DPVI + + T +G KQ L++ +
Sbjct: 168 -KIPELKVLAFDIEVYNKYGS-PNPRRDPVI-IIGVWTKEGGKQFLADKYDDLRAIREFI 224
Query: 357 GVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV------------ 404
+F++ DPD+++GYNI FD PYL+E+ ++
Sbjct: 225 ------------------NFVQTYDPDIIVGYNINNFDWPYLLERANIRGIRLDVGRRVN 266
Query: 405 ---------HHSIISDLQ---NGNAETRRRLAVYCLKD-----AYLPQR----------- 436
H+SI L G A++ + + V L++ LP+
Sbjct: 267 GEPSQGVYGHYSITGRLNVDLYGFAQSIQEVKVKTLENIADYLGVLPKEKRTIVEWYDIP 326
Query: 437 ------------------------LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLS 472
LL ++ F +E+ R++G+P+ L +V
Sbjct: 327 KYWDDEKKRDILLKYNLDDAKSAYLLGEVFIPFG-IELTRISGLPLDQLSMASVGHRVEW 385
Query: 473 QLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYN 532
L+R+A + N +IPN ++ E +YEG V+ G +E+ + LDF+S+YPSIM+ YN
Sbjct: 386 LLMREAYKYNELIPNKEE--REYESYEGGLVISPLPGIHEE-VYVLDFSSMYPSIMIKYN 442
Query: 533 LCYSTLVTPEDARKLNLPPECVN--KTPSGETFVKSNLQKGILPEILEELLAARKRAKAD 590
+ TLV E C N +P G F K G+ +LE+L+ RK K
Sbjct: 443 IGPDTLVKGE----------CENCWVSPVGHKFRKE--PPGLYKNVLEKLIQERKEVKKL 490
Query: 591 LKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKK 650
+++ D +K VLD RQ ALK+ AN+ YG+ G + E + +VT++GRQ+I + K
Sbjct: 491 MEKTIDEYDKRVLDARQRALKVMANAFYGYMGWLGARWYSKEGAEAVTAWGRQIISDSAK 550
Query: 651 LVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLE 710
+ ++K T VIYGDTDS+ V+ G + IS F IK++
Sbjct: 551 IAKEKGFT---------VIYGDTDSIFVKGGGDINSLITE--------ISSKFGLEIKID 593
Query: 711 --FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKIL 768
+++V++ +KKRYAGL + K+D G E VR D C L K + T + IL
Sbjct: 594 KIYKRVFFTE---NKKRYAGL-----TEDGKIDIVGFEAVRGDWCDLAKQVQTNVIELIL 645
Query: 769 VDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDA 828
+ A++YVKS I DL + L+I K + K D+Y+V A HV A++ K
Sbjct: 646 KSGKVEDAIKYVKSVIFDLRRYNFRIEDLIIWKTIDKNLDEYDVTAPHVVAAKKAAKAGY 705
Query: 829 ATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
+ V ++ YVI+K + K +++E P ++++ ID YY++ QI LRI E
Sbjct: 706 LVSKGV--KIGYVIVKGS--GKISDKAE-PYFLVKEKNKIDVEYYIDKQIIPVALRILE 759
>gi|86196720|gb|EAQ71358.1| hypothetical protein MGCH7_ch7g765 [Magnaporthe oryzae 70-15]
Length = 1736
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 196/640 (30%), Positives = 298/640 (46%), Gaps = 80/640 (12%)
Query: 418 ETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRK 477
+TR RL + L++ L I E AR+ GV + SRG KV S + R
Sbjct: 1084 QTRTRLDIEILEENGL----------ISRTSEQARLLGVDFFSVFSRGSQFKVESIMFRI 1133
Query: 478 AKQKN--LVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCY 535
AK +N LV P+ KQ G + V+E ++ FY P+ LDF SLYPS+M+AYN CY
Sbjct: 1134 AKPENFMLVSPSRKQVGGQNALECLPLVMEPQSAFYNSPVLVLDFQSLYPSVMIAYNYCY 1193
Query: 536 ST----LVTPEDARKLNLPP------------ECVNKTPSGETFVKSNLQKGILPEILEE 579
ST +V K+ E +N P+G + K ++K +L ++L E
Sbjct: 1194 STFLGRIVDWRGTNKMGFAEYRRRKRLLELLQEHINIAPNGVMYTKPEIRKSLLAKMLTE 1253
Query: 580 LLAARKRAKADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSV 637
+L R K+ +K+ KD + +L+ RQLALK+ AN YG+T A+ G+LPC EI+ S+
Sbjct: 1254 ILETRVMVKSGMKQDKDDKTLQQLLNNRQLALKLLANVTYGYTSASFSGRLPCSEIADSI 1313
Query: 638 TSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAAD 697
GR+ +E + +V + AEV+YGDTDS+ + T E A ++G E A
Sbjct: 1314 VQTGRETLERAIAFIH----SVPRW--GAEVVYGDTDSLFIHLKGRTKEQAFEIGNEMAK 1367
Query: 698 YISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTN-PEKFDKMDTKGIETVRRDNCLLV 756
I+ +P+KL+FEKVY P +L++KKRY G + + ++ D KGIETVRRD
Sbjct: 1368 AITDMNPRPMKLKFEKVYLPCVLLAKKRYVGYKYEHVDQQVPDFDAKGIETVRRDGTPAE 1427
Query: 757 KNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITK--GLTKTGDDYEVKA 814
+ + + L + D+ +Y + + ++ ++ + K L D V
Sbjct: 1428 QKIEEKALRLLFETADLSQIKEYFQRQCNKIMRGQVSIQDFCFAKEVKLGTYSDRNGVGP 1487
Query: 815 A--HVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYER---SEDPIYVLENNIPID 869
A ++ + D P G+RV YV++ A GA+ +R ED + ++ +D
Sbjct: 1488 APPGALISTKKMLADPRAEPQYGERVLYVVVTGAPGARLADRCVPPEDMLSPAGAHLRLD 1547
Query: 870 THYYLENQISKPLLRIFEPI---LKNASKELL-----------SGDHTRSISISTPSNSG 915
YY+ + PL RIF + ++ EL SG+ S S N+G
Sbjct: 1548 ADYYISKNLIPPLERIFNLVGAHIRGWYDELPKVQQVRRVVVDSGNGHNSWFGSIMGNNG 1607
Query: 916 IMKFAKRQLSCIGCKALISNGTLCSHCKGREAELYCKTVSQVQEL-----EVLFG----- 965
K K L + N +C+ + R A KT + Q+L LFG
Sbjct: 1608 AQKAKKVTLESY---LQVMNCAVCN-VRIRPATQKKKTPAPRQQLPPVQYHPLFGLAHER 1663
Query: 966 ----RLWTQCQECQGSLHQDVL----CTSRDCPIFYRRKK 997
+ C+ C G DV C S+DCP+FY R K
Sbjct: 1664 KRFSEVADVCRSCAGLAPGDVASVHDCDSKDCPVFYTRVK 1703
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFH--------QILEGRMREA 170
+IR+FG T+ G VC +HG PY +I + +++ F L R+
Sbjct: 42 VIRVFGSTQTGQKVCAHIHGAFPYLFIEYNGKLDQEEVGAFSYRLHLSIDHALAVSYRQD 101
Query: 171 NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLG 230
P++V I +V K Y + +LKI + P ++ +L +G+ +
Sbjct: 102 AYARDTPKYVARITLV-KGVPFYGFHVGYKYYLKIYMLNPVVMTRLADLLHQGV----IM 156
Query: 231 MKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
+ F YE+++ + L+FM D N+ G +IE K+R
Sbjct: 157 KRKFQPYEAHLQYILQFMTDYNLYGCGYIEASSVKFR 193
>gi|435849896|ref|YP_007301837.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
gi|433663384|gb|AGB50809.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
Length = 924
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/480 (32%), Positives = 258/480 (53%), Gaps = 53/480 (11%)
Query: 450 MARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI---PN--VKQAGSEQGTYEGATVL 504
+A+V+G P+ +++ GQ+ V L+ + ++ + ++ PN + + + GA VL
Sbjct: 393 LAQVSGRPLQDVINGGQTNLVEQLLMSRFREIDRLMAMKPNDEIVEERERESNVVGADVL 452
Query: 505 EARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFV 564
+ + G + + D+ SLYP+IMMA NLCY+T++ + P E + +PS F+
Sbjct: 453 DPKKGLHCNTVVE-DYKSLYPTIMMARNLCYTTVIIDKTT-----PKESMIISPSDGHFI 506
Query: 565 KSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGAT 624
K + KGI+P ILE LL R K +K A+D EK VLD QLALKI NS YG++G
Sbjct: 507 KPEIFKGIIPSILEGLLDKRVATKKMMKNARDENEKRVLDATQLALKILLNSFYGYSGYI 566
Query: 625 VGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEV---------------- 668
+L +E+++SVTSYGR+ I +T+ + ++ T+ ++ A
Sbjct: 567 RARLFSLEVANSVTSYGRENIRNTQNTINNEIVTLTIRDNQALTPNESDGTQPNDIIVLL 626
Query: 669 --IYGDTDSVMVQ----------FGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYY 716
IYGDTDS+ + T++ + +G++ A+ ++ +P++L++E
Sbjct: 627 TPIYGDTDSIFIHCTDINGNEFEEEEFTLDMSALVGKKIAEVVTSKLPEPMELQYEATAK 686
Query: 717 PYLLISKKRYAGLYWTNPEKFD----KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRD 772
LL++KKRYA W + D K+ KG+ETVRRD C L + L IL + D
Sbjct: 687 RILLVAKKRYA--MWQFEQAKDGWIQKIKVKGLETVRRDWCNLTSKTLNIILEAILKEGD 744
Query: 773 IPGAVQYVKSTISDL-----LMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRD 827
+ + YV+ I+ + + ++ L ++K L++ Y+ K H+ + E++R+R
Sbjct: 745 VDKCITYVQDVIAKIRKINDTRDEAFIAELTLSKTLSRPPSSYKNKQPHLTVVEKIRER- 803
Query: 828 AATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
P G+R+P++I G E++EDP YV+E+NIPIDT+YY++ QI P LR+ E
Sbjct: 804 GGQVPITGERIPFLITTVGSG--YVEQAEDPAYVIEHNIPIDTNYYIQKQIIPPALRLLE 861
Score = 112 bits (281), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 141/288 (48%), Gaps = 42/288 (14%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
IIRI+G G S+CC V GFEPYF+ Q P ++ ++ +
Sbjct: 23 IIRIYGKDDAGKSICCLVPGFEPYFF---AQADNPAELCNYL-------------TDAFD 66
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
++ ++V+K + YQ +K P +KI V LPT V R I D+ L G+ +E
Sbjct: 67 CIQKADIVEKFLPIGYQTKKV-PIVKITVTLPTDV---RDIRDQIRDLPGVN----EIFE 118
Query: 239 SNVLFALRFMIDCNIVGGNWIEV-PVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFS 297
++VLF RF+ID N+ WI + P ++ T C+ +II+ E
Sbjct: 119 ADVLFHNRFLIDKNLHPLKWITITPAPAEKELHPTNIICE--------EIITAEKVEEID 170
Query: 298 KM--APFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPI 355
K+ APF+ L++DIEC G P P P+I L+++ + N + L S I
Sbjct: 171 KIAHAPFKYLAWDIECLPDNGALPTPDKSPII----LMSIAFSPEYKGMNTLVLAS-KKI 225
Query: 356 VGVDVMS--FETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEK 401
GVD + ++ E D++ A+ +RE DPDV+ G+N FD Y++++
Sbjct: 226 DGVDKETECYDNENDMINAFFSTVREYDPDVLTGFNTDGFDTKYVVDR 273
>gi|18653816|ref|NP_570750.1| DNA polymerase [Macacine herpesvirus 5]
gi|7329997|gb|AAF59986.1|AF210726_7 polymerase [Rhesus monkey rhadinovirus H26-95]
gi|2625044|gb|AAC58687.1| DNA polymerase [rhesus monkey rhadinovirus H26-95]
gi|4494914|gb|AAD21336.1| DNA polymerase [Macaca mulatta rhadinovirus 17577]
Length = 1014
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 261/525 (49%), Gaps = 61/525 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L R ++ YC+ D+ L LL M E+A++ +
Sbjct: 471 KKEDVSYKDIPPLFRSGPGGRAKVGSYCVMDSVLVMDLLKMFMIHVEISEIAKLAKIQAR 530
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ ++V S LL A ++N ++P G QG Y+GATV+ GFY++P+ +D
Sbjct: 531 RVLTDGQQLRVFSCLLEAAARENFILPVPTPEG--QGGYQGATVINPIPGFYDEPVLVVD 588
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSG-ETFV---------KSNLQ 569
FASLYPSI+ A+NLCYST++ R L+L P N TP ETFV K + +
Sbjct: 589 FASLYPSIIQAHNLCYSTMI---HGRDLHLHP---NLTPDDYETFVLSGGPVHFVKKHKR 642
Query: 570 KGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLP 629
+ +L +L L R+ + L DP K +LD +QLA+K++ N+VYGFTG G LP
Sbjct: 643 ESLLGRLLTVWLEKRRAIRRTLAACDDPSLKTILDKQQLAIKVTCNAVYGFTGVASGLLP 702
Query: 630 CIEISSSVTSYGRQMIEHTKKLV-----EDKFTTVG---GYEHNA--EVIYGDTDSVMVQ 679
CI I+ +VT GR M+E +K V ED T +G H A V+YGDTDS+ +
Sbjct: 703 CINIAETVTLRGRTMLEMSKSYVEALTTEDLRTRLGREVTARHGARFRVVYGDTDSLFIA 762
Query: 680 FGVPTVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD 738
+ EA + A I+ F PIKLE EK + LL++KKRY G+ D
Sbjct: 763 CDGYSAEAVSAFCDDLAARITADLFPPPIKLEAEKTFKCLLLLTKKRYIGVLLN-----D 817
Query: 739 KMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA---------------------- 776
KM KG++ +R+ C V+ L +L D ++ A
Sbjct: 818 KMVMKGVDLIRKTACKFVQERCRAILDLVLHDPEVKAAARLLCKRPPHAVYEEGLPAGFI 877
Query: 777 --VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPN 833
V+ + ++ DL + + + L + L++ DY+ H+ + +++ R P
Sbjct: 878 KIVEVLNASYLDLRNSVVPIEQLTFSTELSRPVCDYKTTNLPHLAVYQKLASR-CEELPQ 936
Query: 834 VGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
V DR+PYV + A K+ + +E P YV ++ IP+ Y + +
Sbjct: 937 VHDRIPYVFVDAPGSLKS-DLAEHPDYVRQHQIPVAVDLYFDKLV 980
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 157/328 (47%), Gaps = 41/328 (12%)
Query: 87 QCQSIMFQQLDIDYVIGDSNR----------ELLPLSSGSAAIIRIFGVTREGHSVCCKV 136
Q QSI F D+ ++R +++P S ++++ G T +G SVC V
Sbjct: 96 QDQSITFHAYDVVETTYAADRCAEVPSRFQTDIIP----SGTVLKLLGRTEDGTSVCVNV 151
Query: 137 HGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQ 196
+ YFY P G+ +++H IL+ ++ + R V KR + Y
Sbjct: 152 FRQQVYFYAKVPAGI---NVTH---ILQQALKNTAGRAACGFSTRR---VNKRILKTYDV 202
Query: 197 QKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGG 256
+ P +I ++ +M+++ + DR L G + F ESNV RF++D
Sbjct: 203 AE-HPVTEITLSSGSMLST---LSDR---LVACGCEVF---ESNVDAVRRFVLDHGFTTF 252
Query: 257 NWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKG 316
W R A+ + LEFDC + D+ + + S P+RI++FDIEC G G
Sbjct: 253 GWYSCARATPRLAARD-ARTALEFDCSWEDL---SVQADRSDWPPYRIVAFDIECTGEAG 308
Query: 317 HFPEPTHD--PVIQVANLVTLQGEKQPFIRNVM-TLKSCAPIVGVDVMSFETERDVLLAW 373
FP T D VIQ++ + E P N++ ++ +C PI DV+ F +E D+L+++
Sbjct: 309 -FPCATRDGDAVIQISCVFYTTREGAPNPPNILFSVGTCDPIPDTDVLEFPSEYDMLVSF 367
Query: 374 RDFIREVDPDVMIGYNICKFDLPYLIEK 401
IR+ + D + GYNI FDLPYLI +
Sbjct: 368 FAMIRDFEVDFLTGYNISNFDLPYLITR 395
>gi|325094502|gb|EGC47812.1| polymerase zeta subunit [Ajellomyces capsulatus H88]
Length = 1637
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 170/555 (30%), Positives = 273/555 (49%), Gaps = 44/555 (7%)
Query: 426 YCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI 485
Y L L ++++ I E AR+ G+ + SRG KV S + R AK +N ++
Sbjct: 999 YFLSRVQLDLKIIESNELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPENFIL 1058
Query: 486 --PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYST----LV 539
P KQ G + V+E ++ FY P+ LDF SLYPSIM+AYN CYST +V
Sbjct: 1059 ISPGKKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGRVV 1118
Query: 540 TPEDARKLN------------LPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRA 587
+ KL L + +N P+G + K ++K +L ++L E+L R
Sbjct: 1119 SWRGQNKLGFIDFRRPAGLLELLKDQINIAPNGIIYAKQEVRKSLLAKMLIEILETRVMV 1178
Query: 588 KADLKEAKDPLE-KAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMI 645
K +K KD + +L+ RQLALK+ AN YG+T A+ G++PC EI+ S+ R+ +
Sbjct: 1179 KGGMKADKDDKHLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCAEIADSIVQTARETL 1238
Query: 646 EHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIK 705
E L+ +V + AEV+YGDTDS+ V T + A +G E A ++ + +
Sbjct: 1239 EKAIVLIH----SVERW--GAEVVYGDTDSIFVYLKGRTRDEAFDIGEEIARAVTDSNPR 1292
Query: 706 PIKLEFEKVYYPYLLISKKRYAGL-YWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECL 764
P+KL+FEKVY+P +L++KKRY G Y + +K D KGIETVRRD + + + L
Sbjct: 1293 PVKLKFEKVYHPCVLLAKKRYVGYKYESRLQKEPDFDAKGIETVRRDGTPAEQKIEEKAL 1352
Query: 765 HKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVELAERM 823
+ D+ Y + + ++ ++ + K + T + + ++ +
Sbjct: 1353 KILFETADLSRVKSYFQKQCAKIMQGKVSIQDFCFAKEVRLGTYSERGIPPPGALISAKR 1412
Query: 824 RKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN-IPIDTHYYLENQISKPL 882
D T G+RVPYV+I A GA+ +R P +L ++ + +D YY+ + PL
Sbjct: 1413 MLEDPRTEVQYGERVPYVVISGAPGARLIDRCVAPEVLLHDSQLELDAEYYISKNLIPPL 1472
Query: 883 LRIFEPILKNASK---ELLSGDHTRSI---SISTPSNSGIMKFAKRQL-------SCIGC 929
RIF + N + E+ R I + + P+N + AK+ L SC+ C
Sbjct: 1473 ERIFNLVGANVRQWYDEMPKYQRVRRIEGGASNVPANKEGLFSAKKTLESYMKLSSCVVC 1532
Query: 930 KALISNG--TLCSHC 942
+ + G +C+ C
Sbjct: 1533 REKLEGGEEQICTGC 1547
>gi|195027904|ref|XP_001986822.1| GH20319 [Drosophila grimshawi]
gi|193902822|gb|EDW01689.1| GH20319 [Drosophila grimshawi]
Length = 2215
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 178/605 (29%), Positives = 286/605 (47%), Gaps = 69/605 (11%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGSEQGTYEGATVLEA 506
EMA++ G+ +LSRG +V S +LR AK +NLV P+V+Q + A ++E
Sbjct: 1619 EMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPRNLVPLSPSVQQRAHMRAPEYLALIMEP 1678
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPED-----------------ARKLN- 548
+ FY P+ LDF SLYPS+++ YN C+ST + + +R+L
Sbjct: 1679 ESRFYADPLIVLDFQSLYPSMIIGYNYCFSTCLGRVEHLGSSGTFEFGASQLRVSRQLLQ 1738
Query: 549 --LPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKD--PLEKAVLD 604
L V +P G FVK +++GILP +L E+L R+ K +K +D L++ VL
Sbjct: 1739 QLLERNLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHRDNSALQR-VLH 1797
Query: 605 GRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYE 663
RQL LK+ AN YG+T A G++P +E+ SV S GR+ +E KLVE +
Sbjct: 1798 SRQLGLKLMANVTYGYTAANFSGRMPAVEVGDSVVSKGRETLERAIKLVER------NEK 1851
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISK 723
V+YGDTDS+ V + A ++G E ++ P+KL+ EKVY P +L +K
Sbjct: 1852 WKVRVVYGDTDSMFVLVPGRSRAEAFRIGEEIVQAVTELNPHPVKLKLEKVYQPCMLQTK 1911
Query: 724 KRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS 782
KRY G +Y T ++ + KGIETVRRD C V ++ + L + D+ QYV
Sbjct: 1912 KRYVGYMYETADQQQPVYEAKGIETVRRDGCPAVAKMLEKVLRLLFETADVSQIKQYVCR 1971
Query: 783 TISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAATAPNVGDRVPY 840
+ LL R +L L+ K + + Y+ A +E+ + ++D P G+RVP+
Sbjct: 1972 QFTKLLSGRANLQDLIFAKEF-RGLNGYKPTACVPALEMTRKWMQKDPRRVPRRGERVPF 2030
Query: 841 VIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLR--------------- 884
I+ G + P +L N ++ YY+ I PL R
Sbjct: 2031 CIVNGPPGMQLIRLVRSPHELLGNEGYKVNAIYYITKAIIPPLNRCLLLIGADVNDWFSN 2090
Query: 885 -----IFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLC 939
+ P L A + + G +IS + + I++ ++ + +C
Sbjct: 2091 LPRKLLITPALSTAGELMNRGSAKSTISQYFSTTNCIIECGRQ-----------TKAGIC 2139
Query: 940 SHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQ 999
+ C ++ +++ +LE + CQ C G L ++ C S DCP+ Y + +
Sbjct: 2140 TDCASNASKCVVTLQAKLAQLERGYWLTQKICQACCGRLG-ELQCGSLDCPVLYVLEVKR 2198
Query: 1000 KDMAE 1004
+DM +
Sbjct: 2199 RDMQQ 2203
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 25/163 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------- 170
I+RIFG +G C VHG PYFYI P D F + G ++ A
Sbjct: 43 IVRIFGANAKGQKSCMHVHGVFPYFYI-------PYDKRDFESVERGILQIAMHLDKAIN 95
Query: 171 ---NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
+ S Q V I++V+ Y + + Q F KI + P V +L G L
Sbjct: 96 ISLGQGSSNAQHVFKIQLVKGIPFYGYHRGEHQ-FFKIYMFNPRFVRRAANLLQSGAILS 154
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP--VGKYRK 268
++F +ES+V + L+FMID N+ G +++ VP + K+R+
Sbjct: 155 ----RNFNPHESHVPYILQFMIDYNLYGMSYLHVPLEIVKFRR 193
>gi|146304901|ref|YP_001192217.1| DNA polymerase II [Metallosphaera sedula DSM 5348]
gi|145703151|gb|ABP96293.1| replicative DNA polymerase I [Metallosphaera sedula DSM 5348]
Length = 783
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 240/848 (28%), Positives = 378/848 (44%), Gaps = 184/848 (21%)
Query: 120 IRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQF 179
I I+G+ REG+ V F PYFY++ + +AN N + Q
Sbjct: 21 IYIWGIDREGNRVVILEKSFRPYFYVTLKE-------------------DANVNEAITQI 61
Query: 180 VR------HIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKS 233
R I V + + Y+ + Q L++ +P +V + R + + + +
Sbjct: 62 KRLSRDQSPITSVTEHEMKYFG--RPQKVLRVETVIPALVRTYREEIAKLKPVKDV---- 115
Query: 234 FMTYESNVLFALRFMIDCNIVGGNWIEVPVGKY-RKTAKTLSYCQLE-FDCLYSDIISRH 291
E+++ F +R+ ID + W+ V + RK + +L+ + +Y D
Sbjct: 116 ---LEADIRFYMRYSIDTGVRPFYWLSAEVSQVERKDLRVAKVYELKRIERVYED---SP 169
Query: 292 PEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKS 351
P+ R ++FDIE + G FP P DP+I V + T G KQ F+ N
Sbjct: 170 PQ--------LRFMAFDIEVFNKYG-FPNPRRDPII-VIGVWTDNGSKQ-FVNN------ 212
Query: 352 CAPIVGVDVMSFETERDVLLAWRDF---IREVDPDVMIGYNICKFDLPYLIEKEDV---- 404
++D L RDF + E DPDV++GYN FD Y++E+ V
Sbjct: 213 --------------DQDDLKILRDFSKFVVEYDPDVILGYNSNGFDWQYMLERASVRGTK 258
Query: 405 -----------------HHSIISDLQ---NGNAETRRRLAVYCLKDA--YL--------- 433
H+S++ L G AE+ + V L + YL
Sbjct: 259 LDIGRKVNSEPSQGTYGHYSVVGRLNVDLYGFAESLEGVKVKSLDNVADYLGILPKNKRT 318
Query: 434 -------------PQR----------------LLDKLMFIFNYVEMARVTGVPISFLLSR 464
P+R LL + F F ++ ++G+P+ L
Sbjct: 319 NLEWYQIPEYWEDPKRREVVLKYNLDDVKTTYLLRDVFFNFG-EQLTVISGLPLDQLCMA 377
Query: 465 GQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLY 524
+V L+R+AKQ N +IPN + E Y+G V+E + G +E +A LDF+S+Y
Sbjct: 378 SVGHRVEWLLMRQAKQFNELIPNRVERRYE--GYKGGLVIEPKPGLHEN-VAVLDFSSMY 434
Query: 525 PSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAAR 584
PSIM+ YN+ TLV E +C G F K G IL LL R
Sbjct: 435 PSIMIKYNIGPDTLVQGE-------CNDCWVAPEVGYKFRKD--VDGFYRSILNFLLEER 485
Query: 585 KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQM 644
++ K + +AKD EK LD RQ ALKI AN++YG+ G + E + +VT++GRQ
Sbjct: 486 RKTKDQMSQAKDEYEKRRLDERQRALKIMANAMYGYMGWLGARWYSKEGAEAVTAWGRQT 545
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
I ++ ++ G+ EVIYGDTDS+ V+ + +VE + +A D
Sbjct: 546 IMTAAEIAKN-----SGF----EVIYGDTDSIFVKGDMSSVELLTQKIVQALDL------ 590
Query: 705 KPIKLE--FEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVT 761
IK++ ++KV++ +KKRYAGL FD K+D G E +R D C L K+
Sbjct: 591 -DIKVDKKYKKVFFTE---NKKRYAGL------TFDGKIDIVGFEAIRGDWCELAKDTQR 640
Query: 762 ECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAE 821
+ +IL+ + + AV+ K I + +L +VI K L K+ D+YEV A HV A+
Sbjct: 641 MVIERILL-KGVDDAVKAAKEVIMKVKRREFELHDIVIWKSLDKSLDEYEVDAPHVIAAK 699
Query: 822 RMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKP 881
+ A N ++ YV++K A + +R E P +++++ ID YY+E QI
Sbjct: 700 KAINAGYAIMRN--GKIGYVVVKGA--GRVSDRVE-PYFMVKDKTKIDIDYYVEKQIIPA 754
Query: 882 LLRIFEPI 889
++RI EP
Sbjct: 755 VMRILEPF 762
>gi|198456440|ref|XP_001360325.2| GA15135 [Drosophila pseudoobscura pseudoobscura]
gi|198135615|gb|EAL24900.2| GA15135 [Drosophila pseudoobscura pseudoobscura]
Length = 2075
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 192/607 (31%), Positives = 279/607 (45%), Gaps = 73/607 (12%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGSEQGTYEGATVLEA 506
EMA++ G+ +LSRG +V S +LR AK KN+V P+V+Q + A +LE
Sbjct: 1479 EMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNVVPLSPSVQQRAHMRAPEYLALILEP 1538
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---------------------VTPEDAR 545
++ FY P+ LDF SLYPS+++AYN C+ST V+ + +
Sbjct: 1539 QSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQMLQ 1598
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLD 604
KL L + V +P G FVK +++GILP +L E+L R K +K K+ + +L
Sbjct: 1599 KL-LEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRLMVKQSMKLHKENSALQRILH 1657
Query: 605 GRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYE 663
RQL LK+ AN YG+T A G++P +E+ SV S GR+ +E K+VE E
Sbjct: 1658 SRQLGLKLMANVTYGYTAANFSGRMPAVEVGDSVVSKGRETLERAIKMVE------ANEE 1711
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISK 723
V+YGDTDS+ V A ++G E A ++ +P+KL+ EKVY P LL +K
Sbjct: 1712 WKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAQAVTEMSPQPVKLKLEKVYQPCLLQTK 1771
Query: 724 KRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS 782
KRY G +Y T + + KGIETVRRD C V ++ + L + D+ QYV
Sbjct: 1772 KRYVGYMYETADQAQPVYEAKGIETVRRDGCPAVAKMLEKVLRLLFETADVSQVKQYVCR 1831
Query: 783 TISDLLMNRMDLSLLVITK---GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVP 839
+ LL R +L L+ K GL V A ++L + ++D P G+RVP
Sbjct: 1832 QFTKLLSGRANLQDLIFAKEFRGLNGYKPTACVPA--LQLTRKWMQKDPRRIPRRGERVP 1889
Query: 840 YVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNASKELL 898
++II G + P +L N I+ YY+ I PL R LL
Sbjct: 1890 FIIINGPPGMQLIRLVRSPHDILANEGHKINAIYYITKAIIPPLNRCL----------LL 1939
Query: 899 SGDHTRSISISTPSNSGIM---KFAKRQLSCIGCKALISN----------------GTLC 939
G S P +M A S G K+ IS +C
Sbjct: 1940 VGADVNDWFTSLPRKLLMMPALAMANELASGRGAKSTISQYFSTTSCVIDCGRQTKAGIC 1999
Query: 940 SHCKGREAELYCKTVSQVQELEVLFGRLWTQ--CQECQGSLHQDVLCTSRDCPIFYRRKK 997
C + +V LE G TQ CQ C G + + C S DCP+ Y +
Sbjct: 2000 PECLRDATKCVITLSDKVARLER--GHQLTQQICQSCCGRVG-SLQCDSLDCPVRYVLEV 2056
Query: 998 AQKDMAE 1004
++D+ +
Sbjct: 2057 KRRDVQQ 2063
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------- 170
IIR+FG G C VHG PYFYI P D F + G ++ A
Sbjct: 46 IIRVFGANSAGQKTCMHVHGVFPYFYI-------PYDKKDFESLERGILQIAMHLDKALN 98
Query: 171 ---NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
+ S Q V I++V+ Y + Q FLKI + P V +L G L
Sbjct: 99 ISLGQGSSNAQHVFKIQLVKGIPFYGYHRVDHQ-FLKIYMFNPRFVRRAANLLQSGAILS 157
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP--VGKYRKT 269
K+F +ES+V + L+FMID N+ G +++ VP V K+R++
Sbjct: 158 ----KNFNPHESHVPYILQFMIDYNLYGMSYLHVPLEVVKFRRS 197
>gi|402221982|gb|EJU02050.1| hypothetical protein DACRYDRAFT_107768 [Dacryopinax sp. DJM-731 SS1]
Length = 1592
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 184/617 (29%), Positives = 294/617 (47%), Gaps = 51/617 (8%)
Query: 422 RLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK 481
+L Y L+ +LD+ I E ARV GV +L RG V S + R AK +
Sbjct: 966 QLIDYLLERTVTVIEILDETELITKTAEFARVFGVEFFSVLERGSQYMVESFMFRIAKPE 1025
Query: 482 NLVI--PNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV 539
N V+ P+ +Q G + ++E ++ Y+ P+ LDF SLYPSIM+AYN CYST +
Sbjct: 1026 NFVLISPSKEQVGQQNAAECVPLIMEPQSACYKGPLVVLDFQSLYPSIMIAYNYCYSTCL 1085
Query: 540 ---------TPEDARKLNLPP-------ECVNKTPSGETFVKSNLQKGILPEILEELLAA 583
+ L++PP + + + +G FVK ++++ +L ++L ELL
Sbjct: 1086 GRVRNFKGKSKFGVTDLSIPPGVLELLKDDITISANGMMFVKDHVRRSLLSKMLSELLDT 1145
Query: 584 RKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYG 641
R K +K AK D +L+ RQL+LK AN YG+T A+ G++P +EI+ ++ G
Sbjct: 1146 RVMVKQGMKTAKGDKSLLRLLNARQLSLKYIANVTYGYTSASYSGRMPAVEIADAIVQSG 1205
Query: 642 RQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISG 701
R+ +E L+ T G A+V+YGDTDS+ + T + A ++G + AD I+
Sbjct: 1206 RETLEKAVHLINS--TAKWG----AKVVYGDTDSLFIYLPGRTKDEAFQIGHDMADTITS 1259
Query: 702 TFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLV 760
P+K++FEKVY P +L++KKRY G + NP+ + D KGIETVRRD C L + +V
Sbjct: 1260 LNPAPVKMKFEKVYLPCVLMAKKRYVGFKYENPDDVQPEFDDKGIETVRRDGCALTRKMV 1319
Query: 761 TECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLT-KTGDDYEVKAAHVEL 819
L + +D+ +Y + S +L R+ + +I K + T + +
Sbjct: 1320 EASLRILFNTQDLSEVKEYCRRQWSKILEGRLPIQDFIIAKEVRLGTYIEGAAPPPGAAV 1379
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQI 878
A +D G+RVPYVI++ +G + +R+ P +L N + ID YY+ Q+
Sbjct: 1380 AAMKAVKDPQAEAQYGERVPYVIMR-GEGRRLVDRAISPEVLLRNRDQRIDPIYYITRQL 1438
Query: 879 SKPLLRIFEPI----------------LKNASKELLSGDHTRSISISTPSNSGIMKFAKR 922
PL RIF + A ++ + + S S S I + +
Sbjct: 1439 IPPLERIFNLVGADVQAWYDDMPKKLRANRADSVVVIPRRDKDVKTSKASASTIERHFRS 1498
Query: 923 QLSCIGCKALISNGTLCSHC-KGREAELYCKTVSQVQELEVLFGRLWTQCQECQGS-LHQ 980
L C+ C+ ++ +C C + LY +++ E C C S +
Sbjct: 1499 NL-CLVCEEQ-TDSAVCPSCLRDLPTTLYSLN-TRMHLGEQRLRDTQQICASCTASPPGE 1555
Query: 981 DVLCTSRDCPIFYRRKK 997
+ C S DC Y R K
Sbjct: 1556 PIRCESLDCEWLYERVK 1572
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-----NRN 173
++ +FG T G C +H PY YI + P ++ F L ++ A RN
Sbjct: 39 VLNVFGHTSAGQKACVHIHNVFPYLYIEYKGELDPGSVNKFINRLGRKLNHALTLVLRRN 98
Query: 174 SKVPQFVRHI-EMVQKRSIMYYQ-QQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGM 231
V +HI ++ + + +Y + FLKI+ + P ++ + +L+ G +
Sbjct: 99 PYVQNTPQHIVAILPVKGVHFYGFHHRRSIFLKIMFSDPRLIRKVQLLLESG----AICE 154
Query: 232 KSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRK 268
K++ TYES+V + L+FM D N+ G NW+EV ++R+
Sbjct: 155 KAWQTYESHVDYKLQFMCDFNLYGCNWLEVADCRFRE 191
>gi|77407328|ref|ZP_00784248.1| DNA polymerase delta large chain, fragment [Streptococcus
agalactiae H36B]
gi|77174063|gb|EAO77012.1| DNA polymerase delta large chain, fragment [Streptococcus
agalactiae H36B]
Length = 256
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 150/193 (77%), Gaps = 2/193 (1%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDVHH++I++L NG ++RRRLAVYCLKDAYLPQRL+DKLM + NY EMARVTGVP +
Sbjct: 55 QKEDVHHTMITELYNGTXDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFN 114
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ +K +SQL RKA +++LVIPN+K E+ Y+GATV+E +Y+ PIATLD
Sbjct: 115 FLLSRGQQVKFISQLFRKALEQDLVIPNLKNENGEE-QYKGATVIEPVKDYYDVPIATLD 173
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-ECVNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSI+ A+NLCY+TL+ KL L E TP+G+ F S ++KG+L +IL+
Sbjct: 174 FASLYPSIIQAHNLCYTTLLNKTSVEKLKLKKDEDYIVTPNGDMFCTSKVRKGLLSQILQ 233
Query: 579 ELLAARKRAKADL 591
ELL+ARKRAK +L
Sbjct: 234 ELLSARKRAKKEL 246
>gi|195149658|ref|XP_002015773.1| GL10839 [Drosophila persimilis]
gi|194109620|gb|EDW31663.1| GL10839 [Drosophila persimilis]
Length = 2075
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 192/607 (31%), Positives = 279/607 (45%), Gaps = 73/607 (12%)
Query: 449 EMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV--IPNVKQAGSEQGTYEGATVLEA 506
EMA++ G+ +LSRG +V S +LR AK KN+V P+V+Q + A +LE
Sbjct: 1479 EMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNVVPLSPSVQQRAHMRAPEYLALILEP 1538
Query: 507 RAGFYEKPIATLDFASLYPSIMMAYNLCYSTL---------------------VTPEDAR 545
++ FY P+ LDF SLYPS+++AYN C+ST V+ + +
Sbjct: 1539 QSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQMLQ 1598
Query: 546 KLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLE-KAVLD 604
KL L + V +P G FVK +++GILP +L E+L R K +K K+ + +L
Sbjct: 1599 KL-LEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRLMVKQSMKLHKENSALQRILH 1657
Query: 605 GRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYE 663
RQL LK+ AN YG+T A G++P +E+ SV S GR+ +E K+VE E
Sbjct: 1658 SRQLGLKLMANVTYGYTAANFSGRMPAVEVGDSVVSKGRETLERAIKMVE------ANEE 1711
Query: 664 HNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISK 723
V+YGDTDS+ V A ++G E A ++ +P+KL+ EKVY P LL +K
Sbjct: 1712 WKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAQAVTEMSPQPVKLKLEKVYQPCLLQTK 1771
Query: 724 KRYAG-LYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKS 782
KRY G +Y T + + KGIETVRRD C V ++ + L + D+ QYV
Sbjct: 1772 KRYVGYMYETADQAQPVYEAKGIETVRRDGCPAVAKMLEKVLRLLFETADVSQVKQYVCR 1831
Query: 783 TISDLLMNRMDLSLLVITK---GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVP 839
+ LL R +L L+ K GL V A ++L + ++D P G+RVP
Sbjct: 1832 QFTKLLSGRANLQDLIFAKEFRGLNGYKPTACVPA--LQLTRKWMQKDPRRIPRRGERVP 1889
Query: 840 YVIIKAAKGAKAYERSEDPIYVLEN-NIPIDTHYYLENQISKPLLRIFEPILKNASKELL 898
++II G + P +L N I+ YY+ I PL R LL
Sbjct: 1890 FIIINGPPGMQLIRLVRSPHDILANEGHKINAIYYITKAIIPPLNRCL----------LL 1939
Query: 899 SGDHTRSISISTPSNSGIM---KFAKRQLSCIGCKALISN----------------GTLC 939
G S P +M A S G K+ IS +C
Sbjct: 1940 VGADVNDWFTSLPRKLLMMPALAMANELASGRGAKSTISQYFSTTSCVIDCGRQTKAGIC 1999
Query: 940 SHCKGREAELYCKTVSQVQELEVLFGRLWTQ--CQECQGSLHQDVLCTSRDCPIFYRRKK 997
C + +V LE G TQ CQ C G + + C S DCP+ Y +
Sbjct: 2000 PECLRDATKCVITLSDKVARLER--GHQLTQQICQSCCGRVG-SLQCDSLDCPVRYVLEV 2056
Query: 998 AQKDMAE 1004
++D+ +
Sbjct: 2057 KRRDVQQ 2063
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREA-------- 170
IIR+FG G C VHG PYFYI P D F + G ++ A
Sbjct: 46 IIRVFGANSAGQKTCMHVHGVFPYFYI-------PYDKKDFESLERGILQIAMHLDKALN 98
Query: 171 ---NRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLD 227
+ S Q V I++V+ Y + Q FLKI + P V +L G L
Sbjct: 99 ISLGQGSSNAQHVFKIQLVKGIPFYGYHRVDHQ-FLKIYMFNPRFVRRAANLLQSGAILS 157
Query: 228 GLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVP--VGKYRKT 269
K+F +ES+V + L+FMID N+ G +++ VP V K+R++
Sbjct: 158 ----KNFNPHESHVPYILQFMIDYNLYGMSYLHVPLEVVKFRRS 197
>gi|119872473|ref|YP_930480.1| DNA polymerase II [Pyrobaculum islandicum DSM 4184]
gi|6752664|gb|AAF27815.1|AF195019_1 family B DNA polymerase [Pyrobaculum islandicum DSM 4184]
gi|119673881|gb|ABL88137.1| replicative DNA polymerase I [Pyrobaculum islandicum DSM 4184]
Length = 785
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 240/867 (27%), Positives = 381/867 (43%), Gaps = 177/867 (20%)
Query: 115 GSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNS 174
GS IRIFG+ G V F+PYFY+ C + E + +
Sbjct: 16 GSVPEIRIFGILSSGERVVLIDRSFKPYFYVDC-------------AVCEPAALKTALSR 62
Query: 175 KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
P + +++V++R + +S+ FLK++ +P V R ++ G+
Sbjct: 63 VAP--IDDVQIVERRFL-----GRSKKFLKVIAKIPEDVRKLREAAMSIPRVSGV----- 110
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEG 294
YE+++ F +R+MID +V +W V + + +Y + + I P
Sbjct: 111 --YEADIRFYMRYMIDMGVVPCSWNVAEVEEGGRLGGIPTYVVSQ----WYGIDEGFPPS 164
Query: 295 EFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAP 354
++++FDIE +G P+P DPV+ +A + T G ++ F
Sbjct: 165 -------LKVMAFDIEVYNERGS-PDPIRDPVVMLA-IKTNDGHEEVF------------ 203
Query: 355 IVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV---------- 404
S + +R V+ A+ DFIR DPDV++GYN FD PYL+E+
Sbjct: 204 -----EASGKDDRGVVRAFVDFIRSYDPDVIVGYNSNGFDWPYLVERAKAVGVPLKVDRL 258
Query: 405 ----------HHSIIS----DLQNGNAE-------TRRRLAVY----------------- 426
H SI+ DL N E T R+A Y
Sbjct: 259 SNPPQQSVYGHWSIVGRANVDLYNIVEEFPEIKLKTLDRVAEYFGVMKREERVLIPGHKI 318
Query: 427 ----------------CLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKV 470
L D L DKL+ ++++ V+G+P+ + + +V
Sbjct: 319 YEYWKDPNKRPLLKRYVLDDVRSTLGLADKLLPFL--IQLSSVSGLPLDQVAAASVGNRV 376
Query: 471 LSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMA 530
LLR A + V PN ++ E Y+GA VLE + G YE + LDF+S+YP+IMM
Sbjct: 377 EWMLLRYAYRLGEVAPNREE--REYEPYKGAIVLEPKPGMYED-VLVLDFSSMYPNIMMK 433
Query: 531 YNLCYSTLVTPEDARKLNLPPECVNKTPS-GETFVKSNLQKGILPEILEELLAARKRAKA 589
YNL T + P + PPE VN P G F +S G +P++L+ L+ RK +
Sbjct: 434 YNLSPDTYLEPGEPD----PPEGVNVAPEVGHRFRRS--PPGFVPQVLKSLVELRKAVRE 487
Query: 590 DLKE-AKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGR----QM 644
+ K+ D E +LD RQ ALK+ AN++YG+ G + E++ SVT++ R +
Sbjct: 488 EAKKYPPDSPEFKILDERQRALKVMANAIYGYLGWVGARWYKREVAESVTAFARAILKDV 547
Query: 645 IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFI 704
IE ++L V+YGDTDS+ V+ V+ +K Y+ +
Sbjct: 548 IEQARRL-------------GIVVVYGDTDSLFVK-KHGDVDKLIK-------YVEEKY- 585
Query: 705 KPIKLEFEKVYYPYLLI-SKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTEC 763
I ++ +K Y L +KKRYAGL + ++D G E VR D L K++
Sbjct: 586 -GIDIKVDKDYAKVLFTEAKKRYAGLL-----RDGRIDIVGFEVVRGDWSELAKDVQLRV 639
Query: 764 LHKILVDRDI----PGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL 819
+ IL RDI G ++Y++ I L + ++ L+I K L K D+Y+ HV
Sbjct: 640 IEIILKSRDIVEARHGVIKYIREIIERLKNYKFNIDDLIIWKTLDKELDEYKAYPPHVHA 699
Query: 820 AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQIS 879
A+ +++ G + YVI+K G K ER+ P +L++ ID YY+E QI
Sbjct: 700 AQILKRHGYRVGK--GTTIGYVIVKG--GEKVSERAL-PYILLDDIKKIDIDYYIERQII 754
Query: 880 KPLLRIFEPILKNASKELLSGDHTRSI 906
LRI E ++ +L +G RS+
Sbjct: 755 PAALRIAE-VIGVKESDLKTGRMERSL 780
>gi|385303048|gb|EIF47148.1| catalytic subunit of dna polymerase delta [Dekkera bruxellensis
AWRI1499]
Length = 298
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 131/216 (60%), Positives = 159/216 (73%), Gaps = 2/216 (0%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV HSII+ LQNG ETRRRLAVYCLKD+YLP RL++KLM + NY EMARVTGVP S
Sbjct: 31 QKEDVPHSIITQLQNGTPETRRRLAVYCLKDSYLPLRLMEKLMCLVNYTEMARVTGVPFS 90
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
FLLSRGQ IKV+SQL RK + + VIPN+K + YEGATV+ G+Y+ PIATLD
Sbjct: 91 FLLSRGQQIKVISQLFRKCLELDXVIPNMKSENVNE-EYEGATVISPARGYYDVPIATLD 149
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPPEC-VNKTPSGETFVKSNLQKGILPEILE 578
FASLYPSIMMA+N+CY+TLV +L L +P G+ FV + + GILP IL+
Sbjct: 150 FASLYPSIMMAHNVCYTTLVDRATIDRLQLKENVDYEVSPKGDCFVTAARRLGILPTILK 209
Query: 579 ELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISA 614
ELL+ARK+AK +K KDP +K VL+GRQLALKI
Sbjct: 210 ELLSARKKAKKAMKAEKDPFKKQVLNGRQLALKIXG 245
>gi|8925896|gb|AAF81664.1|AF204167_1 DNA polymerase [Macaca nemestrina rhadinovirus 2]
Length = 862
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 162/522 (31%), Positives = 254/522 (48%), Gaps = 55/522 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+KEDV + I L + R ++ YC+ D+ L LL M E+A++ +
Sbjct: 319 KKEDVSYKDIPPLFRSGSAGRAKVGSYCVMDSVLVMDLLKMFMIHVEISEIAKLAKIQAR 378
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ ++V S LL A ++N ++P G QG Y+GATV+ GFY++P+ +D
Sbjct: 379 RVLTDGQQLRVFSCLLEAAARENFILPVPTPEG--QGGYQGATVINPIPGFYDEPVLVVD 436
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLNLPP-------ECVNKTPSGETFVKSNLQKGI 572
FASLYPSI+ A+NLCYST++ R L+L P E + FVK + ++ +
Sbjct: 437 FASLYPSIIQAHNLCYSTMI---HGRDLHLHPTLTPDDYETFVLSGGPVHFVKKHKRESL 493
Query: 573 LPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIE 632
L +L L R+ + L DP K +LD +QLA+K++ N+VYGFTG G LPCI
Sbjct: 494 LGRLLTVWLEKRRAIRRTLAACDDPSLKTILDKQQLAIKVTCNAVYGFTGVASGLLPCIN 553
Query: 633 ISSSVTSYGRQMIEHTKKLVEDKFTT----------VGGYEHNAEVIYGDTDSVMVQF-G 681
I+ +VT GR M+E +K VE + G V+YGDTDS+ + G
Sbjct: 554 IAETVTLRGRTMLEMSKSYVEALTVSDLRERLGREVTAGPAAKFRVVYGDTDSLFIACDG 613
Query: 682 VPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMD 741
P + AA + F PIKLE EK + LL++KKRY G+ DKM
Sbjct: 614 YPADAVSAFCDDLAARITADLFPPPIKLEAEKTFKCLLLLTKKRYIGVLLN-----DKMV 668
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA------------------------V 777
KG++ +R+ C V+ L +L D ++ A V
Sbjct: 669 MKGVDLIRKTACKFVQERCRAILDLVLHDPEVKAAARLLCKKPPRAVYEEGLPRGFIKIV 728
Query: 778 QYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVGD 836
+ + ++ D+ + + + L + L++ DY+ H+ + +++ R P V D
Sbjct: 729 EVLNASYLDIRNDAVPIEQLTFSTELSRPVCDYKTTNLPHLTVYQKLASR-CEELPQVHD 787
Query: 837 RVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
R+PYV + A K+ + +E P YV ++ IPI Y + +
Sbjct: 788 RIPYVFVDAPGTLKS-DLAEHPDYVRQHRIPIAVDLYFDKLV 828
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 128/263 (48%), Gaps = 27/263 (10%)
Query: 142 YFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQP 201
YFY P G+ +++H +L+ ++ + R V KR + Y + P
Sbjct: 5 YFYAKVPSGV---NVTH---VLQQALKNTAGRAACGFSTRR---VTKRILKTYDVAE-HP 54
Query: 202 FLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEV 261
+I ++ M+++ + DR L G + F ESNV RF++D W
Sbjct: 55 VTEITLSSGPMLST---LSDR---LVACGCEVF---ESNVDAVRRFVLDHGFTTFGWYSC 105
Query: 262 PVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEP 321
R A+ + LEFDC + D+ + + + P+RI++FDIEC G G FP
Sbjct: 106 SRATPRLAARD-ARTALEFDCSWEDL---SVQADRNDWPPYRIMAFDIECVGETG-FPCA 160
Query: 322 THD--PVIQVANLVTLQGEKQPFIRNVM-TLKSCAPIVGVDVMSFETERDVLLAWRDFIR 378
T D VIQ++ + + P NV+ ++ +C PI DV+ F +E D+L+++ +R
Sbjct: 161 TRDCDAVIQISCVFYTTRDGAPTPPNVLFSVGTCDPIRDTDVLEFPSEYDMLVSFFAMLR 220
Query: 379 EVDPDVMIGYNICKFDLPYLIEK 401
+ + D + GYNI FDLPYLI +
Sbjct: 221 DFEVDFLTGYNISNFDLPYLIAR 243
>gi|393908164|gb|EJD74935.1| DNA polymerase [Loa loa]
Length = 1248
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 181/628 (28%), Positives = 304/628 (48%), Gaps = 76/628 (12%)
Query: 421 RRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQ 480
+ + +YC L +L +L F EMAR+ G+ + +L+RG +V S LLR A+Q
Sbjct: 660 KHMKLYC----QLNLSILLRLDFFTKTSEMARLYGIQFNEVLTRGSQFRVESMLLRLARQ 715
Query: 481 KNLVIPNVK--QAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTL 538
+ V P++ Q G+ +E +GFY P+ LDF SLYPSI++AYN C++T
Sbjct: 716 EKYVAPSISPAQRGAMCSPETLPLTMEPESGFYRDPVIVLDFQSLYPSIIIAYNYCFTTC 775
Query: 539 V------------------------TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILP 574
+ P D L ++ +P+G F + +++G++P
Sbjct: 776 LGKISHVENICSPNRLIEFGGLQYNCPIDDIVSMLTANKLHVSPTGAIFCQRTVRRGLMP 835
Query: 575 EILEELLAARKRAKADLKEAKDPLEKA-VLDGRQLALKISANSVYGFTGATV-GQLPCIE 632
+LEE+L R K KE K A +L+ RQ+ALK+ AN YG+ A G++PC+E
Sbjct: 836 VMLEEILNTRVMVKKAAKECKKDRRLARILEARQMALKLIANVTYGYAAANFSGRMPCVE 895
Query: 633 ISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLG 692
++ ++ GR+ +E +LV + G Y ++ VIYGDTDS+ V T A +G
Sbjct: 896 VADAIVGKGRETLERAMRLVNE-----GSY-GSSRVIYGDTDSMFVVCPGATRIEAFDIG 949
Query: 693 REAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRD 751
++ AD ++ PIKL+ EK+ +P +L SKKRY G+ + + + + D KGIET+RRD
Sbjct: 950 KKIADDVTKANPNPIKLKLEKIMHPLILESKKRYVGMSYESIDDVKGVFDAKGIETIRRD 1009
Query: 752 NCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYE 811
+C LV N++ + L + V+ D+ V+Y+ +S+L +++ LS + ++ K+ +
Sbjct: 1010 SCPLVSNILEKALRLLFVN-DVKRMVRYLDMQLSNL--SQLPLSDFIFSREYRKSYAESA 1066
Query: 812 VKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPI-YVLENNIPIDT 870
V A+ + +AE+ + P VG+RVPYVI+ + +P ++ + + I+
Sbjct: 1067 VVASKL-IAEKRKTVCPRYEPEVGERVPYVIVTGEPNSTLISCVREPDEFICDRRLKINF 1125
Query: 871 HYYLENQISKPLLRI--FEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIG 928
YY+ Q+ L R F P+ I P+ G C
Sbjct: 1126 EYYVRRQVLPSLHRALDFVPL---------------RIEWHCPTTVG----------CYN 1160
Query: 929 CKALISNGTLCSHCKGREAELYCKTVSQVQELEVLFGRLWTQCQECQG--SLHQDV-LCT 985
C AL + C C L + +E +L L +C++C S++ D C
Sbjct: 1161 CGALGAR-LWCRECIVDPKALLLSVCNYYRERRLL-AHLNDKCRKCLSLRSINIDYNKCI 1218
Query: 986 SRDCPIFYRRKKAQKDMAEAKLQLDRWN 1013
+ C + +R + MAE ++ +N
Sbjct: 1219 NMACIVKQKRILLDRSMAELAVEKSLFN 1246
>gi|448080488|ref|XP_004194650.1| Piso0_005157 [Millerozyma farinosa CBS 7064]
gi|359376072|emb|CCE86654.1| Piso0_005157 [Millerozyma farinosa CBS 7064]
Length = 1520
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 183/629 (29%), Positives = 307/629 (48%), Gaps = 60/629 (9%)
Query: 436 RLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQ 495
+LL I E AR+TG+ +++RG KV + LLR +K N+++ ++ + Q
Sbjct: 902 QLLKSRKIISKTSEQARLTGIDFHSVMNRGSQFKVEAILLRISKPMNVLLNSISKTQLNQ 961
Query: 496 GTYEGAT--VLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV------TPEDA--- 544
V+E + FY+ P+ LDF SLYPS+M+AYN CYST++ P+
Sbjct: 962 MKALECIPLVMEPESMFYKSPLLVLDFQSLYPSVMIAYNYCYSTILGKLHGFNPKKNVLG 1021
Query: 545 --RKLNLPPECVNK---------TPSGETFVKSNLQKGILPEILEELLAARK--RAKADL 591
+ L +P V+ +P+G FVKS ++K IL ++LE+L++ R ++ A +
Sbjct: 1022 YLKNLEVPEGLVDVLNRQDALTISPNGCVFVKSFIRKSILAKMLEDLISIRSTIKSTAGM 1081
Query: 592 KEAKDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKK 650
E ++ + + LD RQLALK+ +N YG+T A+ G++P +++ S+ + GR+++ + +
Sbjct: 1082 FENENSIYET-LDSRQLALKMISNVTYGYTSASFSGRMPNSDLADSIVATGRELLTKSIR 1140
Query: 651 LVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLE 710
L+ED VG A+V+YGDTDS+ V + + A +G++ + +S +F PIKL+
Sbjct: 1141 LIED--ANVG-----AKVVYGDTDSLFVYLPGKSKDEAFSIGQDLSSLVSNSFPDPIKLK 1193
Query: 711 FEKVYYPYLLISKKRYAGLYW--TNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKIL 768
FEKVY+P +L++KKRY GL + +N +K K D KGIETVRRD + +V E L+ +
Sbjct: 1194 FEKVYHPSVLLAKKRYVGLSYEPSNQDK-PKFDAKGIETVRRDGIPAQQQIVKESLNILF 1252
Query: 769 VDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL-AERMRKRD 827
+++ +V S L+ N +++ K + E L A + D
Sbjct: 1253 STKNLTRVKNHVTSQFMKLMSNEVEIKDFCFAKEVRYGTYKNETSMPPGALVAHKKVPID 1312
Query: 828 AATAPNVGDRVPYVIIKAAKGAKAYERS---EDPIYVLENNIP--IDTHYYLENQISKPL 882
+ P +RVPY++ + K +R ED + P +D YY+ + PL
Sbjct: 1313 PRSVPQYRERVPYLVYMDSSTPKLRDRCVSPEDFVKSFNTRTPLKLDYEYYITKVLIPPL 1372
Query: 883 LRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKA---LISNGTLC 939
RIF + + K + + N + +C+ C A L S GT+C
Sbjct: 1373 ERIFGLMGVDVKKWYRELPKSNKWDLMDEGNVFYISNLVSSKTCMSCGAKMDLNSEGTVC 1432
Query: 940 SHCKGREAELYCKTVSQVQELEVLFGRLWTQCQEC----QGSLHQDVL------CTSRDC 989
+ C E + + F +L T C C S +L C +RDC
Sbjct: 1433 NPCLSSN-EFVLSIPESKRNFDRKFFQLSTTCNNCVSTNLNSSSSGLLKLYSGECVNRDC 1491
Query: 990 PIFYRRK----KAQKDMAEAKLQLDRWNF 1014
++Y++ +++ + KL L NF
Sbjct: 1492 AVYYQKHVFKMRSKDGEHKQKLMLSDLNF 1520
>gi|264668979|gb|ACY71882.1| DNA polymerase [Equid herpesvirus 5]
Length = 814
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 164/524 (31%), Positives = 262/524 (50%), Gaps = 54/524 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+DV + I L E R +L YC+KD+ L LL M E+A++ +P
Sbjct: 287 KKDDVSYKEIPHLFRQGPEGRAKLGTYCVKDSALVLDLLKYFMTHVEISEIAKIAKIPTR 346
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A ++ ++P+ + SE Y+GATV++ GFY P+ +D
Sbjct: 347 RVLTDGQQIRVFSCLLDVAGRQGFILPSGNKESSEG--YQGATVIDPTPGFYNTPVLVVD 404
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLN--LPP---ECVNKTPSGETFVKSNLQKGILP 574
FASL P+I+ A+NLCYST++ P D L+ L P E + FVK + +L
Sbjct: 405 FASLLPTIIQAHNLCYSTMI-PGDQLYLHPHLGPGDYETFELSSGAVHFVKKHKTASLLA 463
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
+L LA RK + L D + +LD +QLA+K++ N+VYGFTG G LPC++I+
Sbjct: 464 TLLNAWLAKRKAIRRALAAEADEATRTILDKQQLAIKVTCNAVYGFTGVASGILPCLKIA 523
Query: 635 SSVTSYGRQMIEHTKKLVED-----------KFTTVGGYEHNAEVIYGDTDSVMVQFGVP 683
+VT GR+M+E +K+ +E + E + +VIYGDTDS+ +
Sbjct: 524 ETVTFQGRRMLERSKRYIEAVTPEGLAAILRRPVAACDPEASFKVIYGDTDSLFIHCRGY 583
Query: 684 TVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDT 742
+ EA E A +++ T F+ PIKLE EK + +L++KKRY G+ T K+
Sbjct: 584 SPEAVTGFCDELAAHMTHTLFVDPIKLEAEKTFTCLILLTKKRYIGMMTTG-----KVLM 638
Query: 743 KGIETVRRDNCLLVKNLVTECLHKILVD--------------------RDIPGAVQYVKS 782
KG++ VR+ C V+ L +L D R +P V
Sbjct: 639 KGVDLVRKTACKFVQETTKAVLDLVLRDEGVRAAAERLCSMRVEEVYRRGLPAGFLKVVD 698
Query: 783 TISD----LLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVGDR 837
++D L +N + S L + L++ Y+ + H+ + ++ +R+ P + DR
Sbjct: 699 VLNDSYRRLRLNLVPASQLSFSTELSRPISYYKTLTLPHLVVYNKIMQRNEEL-PQIHDR 757
Query: 838 VPYVIIKAAKGAKAYERS---EDPIYVLENNIPIDTHYYLENQI 878
+ YV ++ +KG K +S EDP Y ++ IP Y + +
Sbjct: 758 IAYVFVQPSKGEKCKLKSDLAEDPAYAAQHGIPPAVDLYFDKVV 801
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 8/192 (4%)
Query: 212 MVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAK 271
+ AS G +D + D L +E+NV A RF+ID W R A
Sbjct: 25 IFASSSGFVD--LLADRLTAAGCEVFETNVDAARRFIIDRGFSTFGWYSCSAAVPRLGAG 82
Query: 272 TLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQV 329
S+ +LE+DC D+ +PE S+ + I+SFDIEC G G FP D ++Q+
Sbjct: 83 RDSWTELEYDCAVGDL-EFYPER--SEWPGYNIMSFDIECMGESG-FPNAARDEDMILQI 138
Query: 330 ANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYN 389
+ ++ +G K ++ L +C+PI GV+V +E D+L + IR++D + + GYN
Sbjct: 139 SCVIWKEGSKGAPRSILLNLGTCSPIEGVEVYECPSELDLLYLFLTMIRDMDLEFVTGYN 198
Query: 390 ICKFDLPYLIEK 401
I FD PY++++
Sbjct: 199 ISNFDFPYILDR 210
>gi|264668981|gb|ACY71883.1| DNA polymerase [Equid herpesvirus 5]
Length = 642
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 165/524 (31%), Positives = 262/524 (50%), Gaps = 54/524 (10%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+DV + I L E R +L YC+KD+ L LL M E+A++ +P
Sbjct: 94 KKDDVSYKEIPHLFRQGPEGRAKLGTYCVKDSALVLDLLKYFMTHVEISEIAKIAKIPTR 153
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A ++ ++P+ + SE Y+GATV++ GFY P+ +D
Sbjct: 154 RVLTDGQQIRVFSCLLDVAGRQGFILPSGNKESSEG--YQGATVIDPTPGFYNTPVLVVD 211
Query: 520 FASLYPSIMMAYNLCYSTLVTPEDARKLN--LPP---ECVNKTPSGETFVKSNLQKGILP 574
FASLYP+I+ A NLCYST++ P D L+ L P E + FVK + +L
Sbjct: 212 FASLYPTIIQARNLCYSTMI-PGDQLYLHPHLGPGDYETFELSSGAVHFVKKHKTASLLA 270
Query: 575 EILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEIS 634
+L LA RK + L D + +LD +QLA+K++ N+VYGFTG G LPC++I+
Sbjct: 271 TLLNAWLAKRKAIRRALAAEADEATRTILDKQQLAIKVTCNAVYGFTGVASGILPCLKIA 330
Query: 635 SSVTSYGRQMIEHTKKLVED-----------KFTTVGGYEHNAEVIYGDTDSVMVQFGVP 683
+VT GR+M+E +K+ +E + E + +VIYGDTDS+ +
Sbjct: 331 ETVTFQGRRMLERSKRYIEAVTPEGLAAILRRPVAACDPEASFKVIYGDTDSLFIHCRGY 390
Query: 684 TVEAAMKLGREAADYISGT-FIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDT 742
+ EA E A +++ T F+ PIKLE EK + +L++KKRY G+ T K+
Sbjct: 391 SPEAVTGFCDELAAHMTHTLFVDPIKLEAEKTFTCLILLTKKRYIGMMTTG-----KVLM 445
Query: 743 KGIETVRRDNCLLVKNLVTECLHKILVD--------------------RDIPGAVQYVKS 782
KG++ VR+ C V+ L +L D R +P V
Sbjct: 446 KGVDLVRKTACKFVQETTKAVLDLVLRDEGVRAAAERLCSMRVEEVYRRGLPAGFLKVVD 505
Query: 783 TISD----LLMNRMDLSLLVITKGLTKTGDDYE-VKAAHVELAERMRKRDAATAPNVGDR 837
++D L +N + S L + L++ Y+ + H+ + ++ +R+ P + DR
Sbjct: 506 VLNDSYRRLRLNLVPASQLSFSTELSRPISYYKTLTLPHLVVYNKIMQRNEEL-PQIHDR 564
Query: 838 VPYVIIKAAKGAKAYERS---EDPIYVLENNIPIDTHYYLENQI 878
+ YV ++ +KG K +S EDP Y ++ IP Y + +
Sbjct: 565 MAYVFVQPSKGEKCKLKSGLPEDPAYAAQHGIPPAVDLYFDKVV 608
>gi|327311462|ref|YP_004338359.1| DNA polymerase II [Thermoproteus uzoniensis 768-20]
gi|326947941|gb|AEA13047.1| DNA polymerase II [Thermoproteus uzoniensis 768-20]
Length = 785
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 239/873 (27%), Positives = 374/873 (42%), Gaps = 189/873 (21%)
Query: 93 FQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMG 152
F LDI Y I +G IR+FG+T++G V GF PYFY+
Sbjct: 5 FWLLDITYSI-----------AGGVPEIRMFGITKDGERVVVADRGFRPYFYVKG----- 48
Query: 153 PDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTM 212
+ S+ Q L +KV V +E V+++ K K+ +P
Sbjct: 49 --NPSNLRQAL----------AKVAP-VEAVEAVERKYF-----GKPVKLFKVTARVPED 90
Query: 213 VASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKT 272
V R + + LDG+ E+++ F +R+M+D + W V V +
Sbjct: 91 VRRLR---EAALALDGVEE----VLEADIRFYMRYMVDVGVTPSTWHLVDVSEEGTLGGL 143
Query: 273 LSYCQLEFDCLYSDIISRHPEG---EFSKMAP-FRILSFDIECAGRKGHFPEPTHDPVIQ 328
Y ++R P E + + P RI +FDIE +G +P DPV+
Sbjct: 144 RRY------------LARRPPVPILEKTGVLPDLRIAAFDIEVYNARGT-ADPARDPVVT 190
Query: 329 VANLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGY 388
+ ++K + +R L + +++RE DPDV++GY
Sbjct: 191 I------------------SIKDSSGKAFAITADGRDDRKALREFVEYVREYDPDVILGY 232
Query: 389 NICKFDLPYLIEK------------------EDVH-------------HSIISDLQNGNA 417
N FD PYL E+ + V+ +++I ++Q
Sbjct: 233 NSNGFDWPYLAERAKRLGVALSVDRLGGAPQQSVYGHWSVVGRANVDLYNVIDEIQEIKV 292
Query: 418 ETRRRLAVY---------------------------------CLKDAYLPQRLLDKLMFI 444
+T R A Y ++DA L +KL+
Sbjct: 293 KTLDRAAEYFGVMKRDERTLIPGHRIYEYWDDPSRRPIFIKYAIEDAVSTYGLGEKLLPY 352
Query: 445 FNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVL 504
++++ V+GVP+ + + +V L+R A + V PN ++ E TY+GA VL
Sbjct: 353 L--IQLSSVSGVPLDQVAAASVGARVEWLLMRYAYRMGEVAPNREERPYE--TYKGAIVL 408
Query: 505 EARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPS-GETF 563
E R G Y+ +A LDF S+YPSIMM YNL T + P + PPE V + P G F
Sbjct: 409 EPRPGIYQD-VAVLDFTSMYPSIMMKYNLSPDTYLEPGEPD----PPEGVYRAPEVGHRF 463
Query: 564 VKSNLQKGILPEILEELLAARKRAKADLKEAKDP--LEKAVLDGRQLALKISANSVYGFT 621
KS G +P++L L+ RK ++ + DP +E +LD RQ ALKI AN++YG+
Sbjct: 464 RKS--PTGFIPQVLASLVKLRKEVRSAM-SGLDPNSVEYKLLDERQRALKIMANAMYGYM 520
Query: 622 GATVGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFG 681
G + E++ SVT++ R ++ ++ VIYGDTDS+ V++
Sbjct: 521 GWLGARWYKREVAESVTAFARNILLDVINFAKNT---------GINVIYGDTDSLFVKYS 571
Query: 682 VPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLI-SKKRYAGLYWTNPEKFDKM 740
K +Y++ F I+++ EK+Y L SKKRYAGL ++
Sbjct: 572 --------KDIDRIINYVNDKF--NIEIKLEKIYKKLLFTESKKRYAGLLDDG-----RI 616
Query: 741 DTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA----VQYVKSTISDLLMNRMDLSL 796
D G E VR D C L K + + + L +++ A V YVKS I+++ +DL
Sbjct: 617 DIVGFEVVRGDWCELAKEVQLKVIEYTLKSQNLTEAKDKIVSYVKSIINNIKTYNIDLDD 676
Query: 797 LVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSE 856
L+I K L K D+Y+V HV A+ + K + G + YVI+ KG+
Sbjct: 677 LIIWKTLDKELDEYKVTPPHVYAAKLLEKHGYKI--HKGMSIGYVIV---KGSDKLSSRA 731
Query: 857 DPIYVLENNIPIDTHYYLENQISKPLLRIFEPI 889
P ++E+ +D YY+E QI LRI E I
Sbjct: 732 KPYILVEDIKEVDVDYYIEKQIVPAALRIGEVI 764
>gi|344231485|gb|EGV63367.1| DNA/RNA polymerase [Candida tenuis ATCC 10573]
Length = 1457
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 178/614 (28%), Positives = 297/614 (48%), Gaps = 69/614 (11%)
Query: 448 VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSEQGTYEGATVLE 505
VE++R+ G+ + RG KV S L R AK +N ++ P+ + + + ++E
Sbjct: 853 VELSRLVGIDFNSNFYRGSQFKVESILSRLAKAENFLLNSPSKEHVHQMKPLEQIPLIME 912
Query: 506 ARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARK-----------LNLPP--- 551
+GFY+ P+ LDF SLYPSI++AYNLCYST + K +NL P
Sbjct: 913 PNSGFYKSPLLVLDFQSLYPSIVIAYNLCYSTFLCRLHGFKPSKNPIGYLNHMNLSPMII 972
Query: 552 ------ECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLK---EAKDPLEKAV 602
+C+ T +G FVKS ++K IL ++L+E+L R K+ L+ + ++P V
Sbjct: 973 DLLHKNDCLTVTSNGLVFVKSKIRKSILAKMLQEILTLRINIKSFLQLINQDENPQMVKV 1032
Query: 603 LDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGG 661
+ RQ ALK+ AN YG+ A+ G++P +++ ++ + GR+++ + ++E
Sbjct: 1033 FNSRQTALKLIANVTYGYASASFSGRMPNSDVADAIVATGREILTASIDIIEKS------ 1086
Query: 662 YEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLI 721
E +V+YGDTDS+ V + + A ++G A +S F P+KL+FEKVY+P +L+
Sbjct: 1087 -EFGCKVVYGDTDSLFVYLPGKSRDDAFEIGETLAKTVSAAFPNPVKLKFEKVYHPSILL 1145
Query: 722 SKKRYAGLYWTNPEKFD-KMDTKGIETVRRDNCLLVKNLVTECLHKILVD-RDIPGAVQY 779
SKKRY G + ++ K D KGIET+RRD + +V L KIL D ++ +Y
Sbjct: 1146 SKKRYVGYSYELKDQLKPKFDAKGIETIRRDGIPAQQKIVERAL-KILFDTSNLSSVKKY 1204
Query: 780 VKSTISDLLMNRMDLSLLVITKGL---TKTGDDYEVKAAHVELAERMRKRDAATAPNVGD 836
V +L N++ + +K + T + Y A V A R + D + P +
Sbjct: 1205 VSEEFRKILSNKVIIKDFCFSKEVRYGTYKNEAYLPPGAIV--ARRNIENDERSEPQYRE 1262
Query: 837 RVPYVIIKAAKGAKAYERSEDPIYVLE-----NNIPIDTHYYLENQISKPLLRIFEPI-- 889
R+PY++ + + +R P +E + +D YY+ + PL R+F +
Sbjct: 1263 RIPYIVYRDPTKQRLKDRCVSPEEFIERLNTSEPMQLDYEYYILKVLIPPLERVFNLMGV 1322
Query: 890 -LKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGC--KALISNGTLCSHCKGRE 946
L+ KEL D+ + S +NS + ++ SCI C + ++ N LC C
Sbjct: 1323 DLQQWYKELSKPDNDIQSTSSGITNSVFI----QKKSCINCQRRIIVKNSKLCHVCLKDT 1378
Query: 947 AELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVL---------CTSRDCPIFYRRKK 997
L + + + L+ L C C H++V C ++DC ++ R K
Sbjct: 1379 PSLILSSKLEQKYLQTKLSDLNKVCGICVS--HENVKATNQVFYDNCKNKDCSTYFNRIK 1436
Query: 998 AQKDMAEAKLQLDR 1011
M E K+ R
Sbjct: 1437 T---MNELKISTQR 1447
>gi|374325878|ref|YP_005084078.1| DNA polymerase II [Pyrobaculum sp. 1860]
gi|356641147|gb|AET31826.1| DNA polymerase II [Pyrobaculum sp. 1860]
Length = 785
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 246/889 (27%), Positives = 382/889 (42%), Gaps = 183/889 (20%)
Query: 91 IMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQG 150
I F LD Y + G +RIFGV G V GF PYFY+ CP
Sbjct: 3 IKFWPLDATYTV-----------VGGVPEVRIFGVAEGGGRVVLVDRGFRPYFYVDCPSC 51
Query: 151 MGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALP 210
D++ L GR+ V +E+V++ + + + F+K+V +P
Sbjct: 52 ----DLAVVKSQL-GRVAP----------VEGVEVVERLFL-----GRPRRFVKVVARVP 91
Query: 211 TMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA 270
V R + L G+ YE+++ F +R+++D +V +W V
Sbjct: 92 EDVRRLR---EAAASLPGVSG----VYEADIRFYMRYLVDMGVVPCSW---NVADVEDAG 141
Query: 271 KTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVA 330
+ L + + ++ P P R+L+FD+E +G P+P DPV+ +A
Sbjct: 142 ERLGRLPVYRVAEWRGVVGGFP-------PPLRVLAFDVEVYNERGT-PDPLRDPVVMLA 193
Query: 331 NLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNI 390
+ T G + F S +R VL ++ D +RE DPDV++GYN
Sbjct: 194 -VQTSDGRVEVF-----------------EASGRDDRGVLRSFVDALREFDPDVVVGYNS 235
Query: 391 CKFDLPYLIEKEDV--------------------HHSIIS----DLQNGNAE-------T 419
KFD PYL E+ H S++ DL N E T
Sbjct: 236 NKFDWPYLSERAKALGVPLRVDRVGGAPQQSVYGHWSVVGRANVDLFNIVEEFPEIKLKT 295
Query: 420 RRRLAVYC-----------------------LKDAYLPQRLLDKLMFIFNYVE------- 449
R+A Y K L Q ++D + + E
Sbjct: 296 LDRVAEYFGVMRRDERVLIPGHKIYEYWRDESKRPLLRQYVVDDVKSTYGLAERLLPFLI 355
Query: 450 -MARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARA 508
++ V+G+P+ + + +V LLR A + V PN ++ E Y+GA VLE +
Sbjct: 356 QLSSVSGLPLDQVAAASVGNRVEWMLLRYAYKMGEVAPNREE--REYEPYKGAIVLEPKP 413
Query: 509 GFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPS-GETFVKSN 567
G Y + LDF+S+YP++MM YNL T + P + PP V P G F +
Sbjct: 414 GLYND-VLVLDFSSMYPNVMMRYNLSPDTYLEPGEPE----PPSGVYIAPEVGHRFRRE- 467
Query: 568 LQKGILPEILEELLAARKRAKADLKE-AKDPLEKAVLDGRQLALKISANSVYGFTGATVG 626
G +P++L +L+ R+ A+ ++K + D E VLD RQ ALK+ AN++YG+ G
Sbjct: 468 -PPGFVPQVLRQLVELRRLAREEMKRYSPDSPEYRVLDERQKALKVMANAMYGYMGWVGA 526
Query: 627 QLPCIEISSSVTSYGRQM----IEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGV 682
+ E++ SVT++ R + I++ K+L V+YGDTDS+ V+ G
Sbjct: 527 RWYKREVAESVTAFARSILRDVIDYAKRL-------------GVVVVYGDTDSLFVKRG- 572
Query: 683 PTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLI-SKKRYAGLYWTNPEKFDKMD 741
VE +K Y+ + I ++ +K Y L +KKRYAGL + ++D
Sbjct: 573 GDVEKLVK-------YVEEKY--GIDIKVDKDYSTVLFTEAKKRYAGLL-----RDGRID 618
Query: 742 TKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA----VQYVKSTISDLLMNRMDLSLL 797
G E VR D L K + + IL RD A QYV+ + L R DL L
Sbjct: 619 IVGFEVVRGDWSELAKEVQLRVIELILKSRDAAEARRRVTQYVREVVDALKNYRFDLDDL 678
Query: 798 VITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSED 857
VI K L K D+Y+ H+ A +++R G V YV++K G K ER+
Sbjct: 679 VIWKTLDKELDEYKAYTPHLHAALLLKRRGYKVGK--GTTVGYVVVKG--GEKISERAV- 733
Query: 858 PIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSI 906
P ++++ ID YY+E Q+ LRI E ++ +L SG +S+
Sbjct: 734 PYILVDDVKKIDVDYYIERQVIPAALRIAE-VIGVKEADLKSGRVEKSL 781
>gi|8925893|gb|AAF81662.1|AF204166_2 DNA polymerase [Retroperitoneal fibromatosis-associated
herpesvirus]
Length = 1013
Score = 232 bits (592), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 159/526 (30%), Positives = 257/526 (48%), Gaps = 63/526 (11%)
Query: 400 EKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPIS 459
+K+D+ + I A R ++ YC+ D+ L LL E+AR+ +P
Sbjct: 468 QKDDISYRDIPPPFRSGAAGRAKIGRYCVIDSVLVMDLLRMFQTHVEIAEIARLARIPAR 527
Query: 460 FLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLD 519
+L+ GQ I+V S LL A ++ ++P G G Y+GATV+ GFY+ P+ +D
Sbjct: 528 RVLTDGQQIRVFSCLLEAASREGYILP--VPNGDTTGGYQGATVISPIPGFYDDPVLVVD 585
Query: 520 FASLYPSIMMAYNLCYSTLVT-----------PEDARKLNLPPECVNKTPSGETFVKSNL 568
FASLYPSIM A+NLCYSTL+T P+D +L V+ FVK ++
Sbjct: 586 FASLYPSIMQAHNLCYSTLITGSALHGHPELTPDDYETFHLSGGTVH-------FVKKHV 638
Query: 569 QKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQL 628
++ +L ++L LA RK + +L DP + +LD +QLA+K++ N+VYGFTG G L
Sbjct: 639 RESLLSKLLTTWLAKRKEIRKNLASCTDPTMRTILDKQQLAIKVTCNAVYGFTGVASGIL 698
Query: 629 PCIEISSSVTSYGRQMIEHTKKLVEDKFTTV----------GGYEHNAEVIYGDTDSVMV 678
PC+ I+ +VT GR+M+E ++ VE T E +VIYGDTDS+ V
Sbjct: 699 PCLNIAETVTLQGRKMLETSQAFVEGISPTALADLLQRPIEASPEARFKVIYGDTDSLFV 758
Query: 679 QFGVPTVEAAMKLGREAADYISGTFIK-PIKLEFEKVYYPYLLISKKRYAGLYWTNPEKF 737
+ E+ + A + T K PIKLE EK++ LL++KKRY G+
Sbjct: 759 CCVGYSNESVSSFADDLAAITTKTLFKAPIKLEAEKIFQCLLLLTKKRYVGVLTD----- 813
Query: 738 DKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLL--------- 788
+K+ KG++ +R+ C V+ E L +L D + A + + +D +
Sbjct: 814 EKVLMKGVDLIRKTACRFVQETSREILELLLRDPAVKAAAKLISHQPADWVYREGLPEGL 873
Query: 789 -------------MNRMDLSL--LVITKGLTKTGDDYEVK-AAHVELAERMRKRDAATAP 832
+ D+ + L T L + +Y+ + H+ + +++ R P
Sbjct: 874 VKIITILNHSYRRLEHGDVPVEKLTFTTELGRPACEYKTQNLPHLSVYRKLQLRQEEL-P 932
Query: 833 NVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQI 878
+ DR+PYV I+A K+ + +E P YV + + + Y + +
Sbjct: 933 QIHDRIPYVFIRAPGNLKS-DLAEHPEYVARHGLQVAVDLYFDKAV 977
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 150/302 (49%), Gaps = 30/302 (9%)
Query: 116 SAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISH-FHQILEGRMREANRNS 174
S ++++ G T +G SVC V YFY P G+ +++H Q L+ + A
Sbjct: 129 SGTVLKLLGRTVDGTSVCVNVFRQRCYFYTRAPPGV---NLTHVLQQSLQSTVGRA---- 181
Query: 175 KVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF 234
E+V+K+ + Y ++ + + I+ + P M A + DR L G + F
Sbjct: 182 ---PCAFTTELVKKKILRVYDTEEYEVYRVILSSSPMMAA----LSDR---LTACGCEVF 231
Query: 235 MTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEG 294
ESNV RF++D W + R A+ ++ +LEFDC + D+ R
Sbjct: 232 ---ESNVDAIRRFVLDRGFTTFGWYACARAEQRLQARD-AWTELEFDCSWEDLELR---P 284
Query: 295 EFSKMAPFRILSFDIECAGRKGHFPEPTHDP--VIQVANLVTLQGEKQPFIRNVMTLKSC 352
+ +RILSFDIEC G +G FP T D ++Q++ + GE P+ R +++L +C
Sbjct: 285 DLHTWPRYRILSFDIECMGEEG-FPRATRDGDVILQISCVFHDAGEDAPYTRMLLSLGTC 343
Query: 353 APIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDVHHSIISDL 412
P+ ++ F +E D+L A+ +R+ D D + GYNI FDLPY+I + ++ DL
Sbjct: 344 DPLENTEIFEFPSEYDMLTAFFTMLRDYDVDFITGYNIANFDLPYIITRATQVYNF--DL 401
Query: 413 QN 414
+N
Sbjct: 402 KN 403
>gi|402084632|gb|EJT79650.1| hypothetical protein GGTG_04734 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1144
Score = 232 bits (591), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 252/513 (49%), Gaps = 38/513 (7%)
Query: 404 VHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLS 463
+ ++ +NG +L Y L +LD+ + E AR+ GV + S
Sbjct: 402 AYETLTDWYRNGWHRDLDKLVRYWQTRVRLDLEILDENELVSRTSEQARLLGVDFFSVFS 461
Query: 464 RGQSIKVLSQLLRKAKQKNLVIPN--VKQAGSEQGTYEGATVLEARAGFYEKPIATLDFA 521
RG KV S + R AK ++ ++P+ +Q G++ V+E ++ FY P+ LDF
Sbjct: 462 RGSQFKVESIMFRIAKPESFLLPSPSRQQVGAQNALECLPLVMEPQSAFYTSPVVVLDFQ 521
Query: 522 SLYPSIMMAYNLCYST----LVTPEDARKLNLP------------PECVNKTPSGETFVK 565
SLYPS+M+AYN CYST +V A K+ + +N P+G + K
Sbjct: 522 SLYPSVMIAYNYCYSTFLGRIVDWRGANKMGFANYRRRRRLLELLQDHINIAPNGVMYTK 581
Query: 566 SNLQKGILPEILEELLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGAT 624
+ ++K +L ++L E+L R K+ +++ K D + +L+ RQLALK+ AN YG+T A+
Sbjct: 582 ATIRKSLLAKMLTEILETRVMVKSGMRQDKEDRALQRLLNNRQLALKLLANVTYGYTSAS 641
Query: 625 V-GQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVP 683
G+LPC EI+ S+ GR+ +E + AEV+YGDTDS+ +
Sbjct: 642 FSGRLPCSEIADSIVQTGRETLERAITFIHSV------QRWGAEVVYGDTDSIFIHLRGR 695
Query: 684 TVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKF-DKMDT 742
T E A ++G E A I+ +P+KL+FEKVY P +L++KKRY G + + + D
Sbjct: 696 TKEQAFEIGNEMAKAITDMNPRPVKLKFEKVYLPCVLLAKKRYVGYKYESVSQLAPDFDA 755
Query: 743 KGIETVRRDNCLLVKNLVTECLHKILVDRDIPGAVQYVKSTISDLLMNRMDLSLLVITKG 802
KGIETVRRD + + + L + D+ Y + ++ + + K
Sbjct: 756 KGIETVRRDGTPAEQKIEEKALRLLFETADLSRVKAYFQRQCDKIMRGNVSIQDFCFAKE 815
Query: 803 L------TKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYER-- 854
+ T+ G A + +RM K DA P G+RVPYV++ A GA+ +R
Sbjct: 816 VKLGTYSTRRGTGPPPPGALIS-TKRMLK-DARAEPQYGERVPYVVVAGAPGARLADRCV 873
Query: 855 -SEDPIYVLENNIPIDTHYYLENQISKPLLRIF 886
ED + ++ +D YY+ + PL RIF
Sbjct: 874 PPEDLVSPAGTHLRLDAEYYISKNLIPPLERIF 906
>gi|170575674|ref|XP_001893336.1| DNA polymerase family B containing protein [Brugia malayi]
gi|158600728|gb|EDP37834.1| DNA polymerase family B containing protein [Brugia malayi]
Length = 1385
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 251/474 (52%), Gaps = 44/474 (9%)
Query: 443 FIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNV----KQAGSEQGTY 498
F EMAR+ G+ + +L+RG +V S LLR A+++ V P++ +QA T
Sbjct: 811 FFTRTSEMARLYGIQFNEVLTRGSQFRVESMLLRLARRERYVAPSISPVQRQAMCSPETL 870
Query: 499 EGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLV------------------- 539
+E +GFY P+ LDF SLYPS+++AYN C++T
Sbjct: 871 --PLTMEPESGFYRDPVIVLDFQSLYPSVIIAYNYCFTTCFGKVSHVENICTADKIIEFG 928
Query: 540 -----TPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEA 594
P D L ++ +P+G F + N+QKG++P +LEE+L R K KE
Sbjct: 929 GLEYNCPIDDIVSMLTTNKLHISPTGAIFCRKNVQKGLMPVMLEEILNTRVMVKKAAKEC 988
Query: 595 KDPLEKA-VLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLV 652
K+ A +L+ RQ+ALK+ AN YG++ A G++PC+E++ ++ GR+ +E KLV
Sbjct: 989 KNDRRLARILEARQMALKLIANVTYGYSAANFSGRMPCVEVADAIVGKGRETLERAMKLV 1048
Query: 653 EDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFE 712
G Y N+ VIYGDTDS+ V T A +G++ AD ++ PIKL+ E
Sbjct: 1049 GS-----GAY-GNSRVIYGDTDSMFVVCPGATRAEAFDIGKKIADDVTRANPSPIKLKLE 1102
Query: 713 KVYYPYLLISKKRYAGLYWTNPEKFDKM-DTKGIETVRRDNCLLVKNLVTECLHKILVDR 771
K+ +P +L SKKRY G+ + + + + + D KGIETVRRD C LV ++ + L + ++
Sbjct: 1103 KIMHPLILESKKRYVGMSYESIDDVEGVFDAKGIETVRRDTCPLVSKILEKTLRLLFIN- 1161
Query: 772 DIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATA 831
D+ V+Y+ +S+L +++ LS + ++ K+ + V A+ + +AE+ +
Sbjct: 1162 DMNRMVRYLDIQLSNL--SQLPLSDFIFSREYRKSYAESAVVASKM-IAEKRKAICRRYE 1218
Query: 832 PNVGDRVPYVIIKAAKGAKAYERSEDPI-YVLENNIPIDTHYYLENQISKPLLR 884
P VG+RVPYVI+ + +P ++ + + I+ YY+ Q+ L R
Sbjct: 1219 PEVGERVPYVIVSGEPKSTLISCVREPDEFIFDRRLKINFEYYIRRQLLPSLHR 1272
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSK--V 176
IIR+FG+ + G C VHG PY I P+ S + + + N K V
Sbjct: 34 IIRMFGILQTGQKCCVHVHGVFPYIVIQTTVQFTPEFASLLRNRISSIVSDYNPRLKFNV 93
Query: 177 PQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMT 236
+ I+ + RS+ Y + ++ F++I+ P + I+ +Q + F
Sbjct: 94 NFAIHEIKSITARSLYGYHKN-NENFVQILCYNPLQLR----IIADALQKEARKNSIFQV 148
Query: 237 YESNVLFALRFMIDCNIVGGNWIEVPVGKYR 267
YE+++ + L+F ID +I G + + K+R
Sbjct: 149 YEAHIPYVLQFFIDHSIFGMDMVNFSSVKFR 179
>gi|379003208|ref|YP_005258880.1| DNA polymerase (pol2) [Pyrobaculum oguniense TE7]
gi|375158661|gb|AFA38273.1| DNA polymerase (pol2) [Pyrobaculum oguniense TE7]
Length = 786
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 244/888 (27%), Positives = 382/888 (43%), Gaps = 181/888 (20%)
Query: 91 IMFQQLDIDYVIGDSNRELLPLSSGSAAIIRIFGVTREGHSVCCKVHGFEPYFYISCPQG 150
I LD+ Y++ G +R+FG+ G V F PYFY+ C G
Sbjct: 3 IRVWPLDVTYIV-----------VGGVPEVRVFGIAEGGERVVLADRSFRPYFYVDC-AG 50
Query: 151 MGPDDISHFHQILEGRMREANRNSKVPQFVRHIEMVQKRSIMYYQQQKSQPFLKIVVALP 210
P H + R A V +E+V++R + + + FLK+V +P
Sbjct: 51 CDP------HAVKTHLGRTAP--------VEGVELVERRFL-----GRPRQFLKVVAKIP 91
Query: 211 TMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTA 270
V R + G+ YE+++ F +R++ID +V +W V +
Sbjct: 92 EDVRRLREAASTIPGVRGV-------YEADIRFYMRYVIDMGVVPCSW---NVAEVEVAD 141
Query: 271 KTLSYCQLEFDCLYSDIISRHPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVA 330
+ L + + + P P R+L+FDIE +G P+P DP++ +A
Sbjct: 142 EKLGSLPVYRVVKWGGAVEGFP-------PPLRVLAFDIEVYNERGT-PDPARDPIVMIA 193
Query: 331 NLVTLQGEKQPFIRNVMTLKSCAPIVGVDVMSFETERDVLLAWRDFIREVDPDVMIGYNI 390
++S + V S +R VL ++ +++R DPDV++GYN
Sbjct: 194 ------------------VQSSDGRLEVFEASGRDDRGVLRSFVEYVRSFDPDVVVGYNS 235
Query: 391 CKFDLPYLIEKEDV--------------------HHSIIS----DLQNGNAE-------T 419
FD PYL E+ H S++ DL N E T
Sbjct: 236 NNFDWPYLAERAKAVGVPLRVDRLGGAPQQSVYGHWSVLGRANVDLYNIVDEFPEIKLKT 295
Query: 420 RRRLAVYC-----------------------LKDAYLPQRLLDKLMFIFNYVE------- 449
R+A Y K L Q ++D + + E
Sbjct: 296 LDRVAEYFGVMRRDERVLIPGHKIYEYWRDPSKRPLLRQYVIDDVRSTYGLAERLLPFLI 355
Query: 450 -MARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARA 508
++ V+G+P+ + + +V LLR A V PN ++ E Y+GA VLE +
Sbjct: 356 QLSSVSGLPLDQVAAASVGNRVEWMLLRYAYGLGEVAPNREE--REYEPYKGAIVLEPKP 413
Query: 509 GFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPEDARKLNLPPECVNKTPS-GETFVKSN 567
G Y + LDF+S+YP++MM YNL T + P + PPE V P G F K
Sbjct: 414 GLYSD-VLVLDFSSMYPNVMMRYNLSPDTYLEPGEPD----PPEGVYVAPEVGHRFRKE- 467
Query: 568 LQKGILPEILEELLAARKRAKADLKEAK-DPLEKAVLDGRQLALKISANSVYGFTGATVG 626
G +P++L L+A R+ + ++K+ + D E VLD RQ ALKI AN++YG+TG
Sbjct: 468 -PPGFIPQVLRRLVALRRAVREEMKKYQPDTPEYRVLDERQKALKIMANAMYGYTGWVGA 526
Query: 627 QLPCIEISSSVTSYGR----QMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGV 682
+ E++ SVT++ R +I++ ++L VIYGDTDS+ V+ G
Sbjct: 527 RWYKKEVAESVTAFARAILKDVIDYARRL-------------GIVVIYGDTDSLFVKKG- 572
Query: 683 PTVEAAMKLGREAADYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWTNPEKFDKMDT 742
KL R D G IK + ++EKV + +KKRYAGL + ++D
Sbjct: 573 ---GDLEKLAR-YVDEKYGIEIK-VDKDYEKVLFTE---AKKRYAGLL-----RDGRIDI 619
Query: 743 KGIETVRRDNCLLVKNLVTECLHKILVDRDIPGA----VQYVKSTISDLLMNRMDLSLLV 798
G E VR D L K + + + IL RD+ A ++YVK I L + DL L+
Sbjct: 620 VGFEVVRGDWSELAKEVQLKVIELILKARDLSEARQRVIKYVKDVIERLKSGKFDLDDLI 679
Query: 799 ITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDP 858
I K L K +Y+ HV A ++K+ G + YV++K G K ERS P
Sbjct: 680 IWKTLDKDLGEYKAYPPHVRAALILKKKGYKVGR--GTTIGYVVVKG--GEKVSERSL-P 734
Query: 859 IYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSI 906
++++ ID YY+E Q+ LRI E ++ +L +G +S+
Sbjct: 735 YILVDDLAKIDVDYYIEKQVIPAALRIAE-VIGVKEGDLRAGRSEKSL 781
>gi|167390088|ref|XP_001739203.1| DNA polymerase zeta catalytic subunit [Entamoeba dispar SAW760]
gi|165897180|gb|EDR24417.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba dispar
SAW760]
Length = 1384
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 173/588 (29%), Positives = 285/588 (48%), Gaps = 53/588 (9%)
Query: 437 LLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQK-NLVIPNVKQAGSEQ 495
LLD +I E A+ P+ + RG KV L R +K + L P+ Q S +
Sbjct: 785 LLDYFDYINRIQEFAQFHACPLKGEIERGSQYKVECCLKRVSKNEFKLFSPSDNQLSSSR 844
Query: 496 GTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYSTLVTPED------------ 543
T A V+E ++GF+ P+ LDF S+YP+ +AYN+CYST + D
Sbjct: 845 ATDCVALVMEPQSGFHSNPVIVLDFLSMYPTTAIAYNICYSTCLGYVDDINIERKIGPMT 904
Query: 544 ----ARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLK---EAKD 596
LN ++ +G FV + L+KGILP +LEE+L+ R+ K +K + +
Sbjct: 905 YSFEKENLNTLKGNIHVVANGIMFVNACLRKGILPIMLEEMLSTRQHIKEIMKVFTKGTE 964
Query: 597 PLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVEDK 655
+K L +QLALK+ N VYG+TGA + G++PC EI+ ++ RQ +E E K
Sbjct: 965 EYKKCFL--QQLALKLLCNVVYGYTGAGLSGRMPCNEIADAIVETARQTLEKAINFAERK 1022
Query: 656 FTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLEFEKVY 715
F GG +VIY DTDS+ V+ T+E + ++G+ + + T P+KL+ EKVY
Sbjct: 1023 F---GG-----KVIYSDTDSLFVEMEGKTLEESFEVGKHLCEEFNKTIPPPMKLQLEKVY 1074
Query: 716 YPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILVDRDIPG 775
+P + ++KKRY G+ + E ++ KG+E VRRD+C +V+ +++ ++ L+++DI G
Sbjct: 1075 WPLVTVTKKRYFGMKYEKYETKPILEAKGLEAVRRDSCGVVRGMMSSVMN-YLLNKDIEG 1133
Query: 776 AVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVG 835
QY+++ + + VI++ + + ++ + R+RD G
Sbjct: 1134 MKQYLETNWEMIQKGEGFIDDFVISRPYRRHYAEGRQPPIGAKVILKERERDNTFYFQYG 1193
Query: 836 DRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFEPILKNASK 895
R+ YV+++ + G K + + P + + ID+ YY+ QI+ L RI P + +K
Sbjct: 1194 QRIKYVVVRTSSG-KLCDSAVSPQFAASEQMVIDSDYYINKQINNSLQRILLPCGIDINK 1252
Query: 896 E--------LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGC-KALISNGTLCSHCKGRE 946
L G + I I I K CI C K +I LC C +
Sbjct: 1253 WYNTSLTRILFEGRKDKKIRIE--DYYLIHK-------CIRCNKKIIGESYLCKACSYDK 1303
Query: 947 AELYCKTVSQVQELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYR 994
+ + ++E+E + +C CQ L C S CPI ++
Sbjct: 1304 RVVIAEYQLHIKEIEQRLIDMKKRCLYCQ--LQYPFECVSTQCPISFK 1349
>gi|119719310|ref|YP_919805.1| DNA polymerase II [Thermofilum pendens Hrk 5]
gi|119524430|gb|ABL77802.1| replicative DNA polymerase I [Thermofilum pendens Hrk 5]
Length = 794
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 229/838 (27%), Positives = 383/838 (45%), Gaps = 160/838 (19%)
Query: 119 IIRIFGVTREGHSVCCKVHGFEPYFYISCPQGMGPDDISHFHQILEGRMREANRNSKVPQ 178
+I ++G+T G + F PYFY+ P+ D + R+R A KV
Sbjct: 26 VIYLWGITESGERIVVAEKNFRPYFYL-VPENAISDALVE-------RVRTALHTFKVLS 77
Query: 179 FVRHIEMVQKRSIMYYQQQKSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYE 238
V IE R + ++ LK+ + P V R + + G++ + E
Sbjct: 78 -VNAIE----RKLF----GRTLNVLKVTITDPRDVPKAREVAAKI-----PGIRDVL--E 121
Query: 239 SNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKTLSYCQLEFDCLYSDIISRHPEGEFSK 298
+++ F +R+M+D I +W+ + K R + EF L P K
Sbjct: 122 ADIRFYMRYMVDTGISPSSWV---LAKVRSAPVPNGWRVDEFFELVE-----APRSLDKK 173
Query: 299 MAP-FRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEKQPFIRNVMTLKSCAPIVG 357
P + +FDIEC R G P+P DPV+ ++ T + I
Sbjct: 174 STPRLKTYAFDIECYNRYGE-PDPERDPVLVISR----------------TGEDGTVIFS 216
Query: 358 VDVMSFETERDVLLAWRDFIREVDPDVMIGYNICKFDLPYLIEKEDV------------- 404
D S +E+ +L + + + + DPDV++GYN +FD PYL+++ V
Sbjct: 217 QDEGS--SEKKLLEEFVNDLVQYDPDVILGYNSNRFDWPYLLQRARVNGVKLSIGRNLGE 274
Query: 405 -------HHSII-----------SDLQNGNAET--------------------------- 419
H S++ S+LQ +T
Sbjct: 275 PSQSVYGHFSVVGRANVDLYDYASELQEVKVKTLENVSEFLGVMKKSERVLIDTNKVYEY 334
Query: 420 -----RRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFLLSRGQSIKVLSQL 474
+R L + D LL +++ F ++++ + G+P+ + + +V L
Sbjct: 335 WDSKDKRSLLLRYAGDDARSTYLLGQVVLPFG-IQLSSLVGLPLDQVFAASVGNRVEWFL 393
Query: 475 LRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLC 534
+R+A N ++PN ++ G E TY+GA VL+ + G ++K IA LDF+S+YP+IM+ YN+
Sbjct: 394 IRQAFVFNELVPNSRERGEE--TYKGAIVLKPKPGVHKK-IAVLDFSSMYPNIMIKYNIS 450
Query: 535 YSTLVTPEDARKLNLPPECVNKTPS-GETFVKSNLQKGILPEILEELLAARKRAKADLKE 593
T V PE+ ++ P V P G F K G ++LE LL AR+R + +K
Sbjct: 451 PDTYVPPEE----HVDPSEVWVAPEVGHRFRKH--PPGFYRKVLESLLEARRRLREKMKT 504
Query: 594 AKDPL--EKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKL 651
DP E + D RQ A+K+ N+ YG++G ++ + E++ + T++GR++I+ T K
Sbjct: 505 L-DPRSEEYRIYDERQKAIKVITNATYGYSGWSMARWYKREVAEATTAWGRELIKATIK- 562
Query: 652 VEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEAAMKLGREAADYISGTFIKPIKLE- 710
K ++G +IYGDTDS+ VQF K+GR +Y+ IKL+
Sbjct: 563 ---KAQSLG-----LSIIYGDTDSIFVQFD------EEKIGR-LVEYVEKELGFEIKLDK 607
Query: 711 -FEKVYYPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILV 769
+EKV++ SKK+Y GL ++D G E VR D + K + + +L
Sbjct: 608 VYEKVFFTE---SKKKYCGLLADG-----RVDLVGFEAVRGDWAEISKEIQERVVEIVLK 659
Query: 770 DRDIPGAVQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAA 829
+ D AV +V+ TI++L R+ L LVI K L+K D+YEV A HV +A +++
Sbjct: 660 EEDPWKAVDFVRKTITELSEGRIPLEKLVIWKTLSKDLDEYEVDAPHVVVARELKRLGYR 719
Query: 830 TAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTHYYLENQISKPLLRIFE 887
G ++ Y+++K A K E+++ P+ +++ +DT YY++ QI LRI E
Sbjct: 720 VGK--GAKIGYIVVKGA--GKVSEKAK-PLISVKSPDEVDTDYYVKRQIVPAALRILE 772
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,576,147,717
Number of Sequences: 23463169
Number of extensions: 661714510
Number of successful extensions: 1645997
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3618
Number of HSP's successfully gapped in prelim test: 1590
Number of HSP's that attempted gapping in prelim test: 1614203
Number of HSP's gapped (non-prelim): 12351
length of query: 1014
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 861
effective length of database: 8,769,330,510
effective search space: 7550393569110
effective search space used: 7550393569110
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)