BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001781
(1013 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O74304|WIN1_SCHPO MAP kinase kinase kinase win1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=win1 PE=1 SV=1
Length = 1436
Score = 37.0 bits (84), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 25 IVPVVTRTGSKAGLLKSTGCNEEK--HNGSGSNSPRTDSDDDNAAAAATTTSGNNDQQQH 82
I P + + S ++KS G E+ H G +SP D + N+ A + T ++ +
Sbjct: 158 IRPSLQSSISSNRIIKSPGIKEDDYMHRGRSISSPMIDVEHINSTAVPSKTKNLPEKPKR 217
Query: 83 PHSIRDRFRFKRNPNHTQDKTQTK 106
H +R+ F + +H + K+Q +
Sbjct: 218 SHKLRNSITFAKIEDHPERKSQLR 241
>sp|O05083|Y1698_HAEIN Uncharacterized glycosyltransferase HI_1698 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_1698 PE=3 SV=1
Length = 353
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 509 SQVEQGFPSLIVRAMTFGIPVITPDF-PIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 567
SQ E G P +++ AM FG+P++ + P +K+ V +++N E + + L I+
Sbjct: 263 SQTE-GLPLVVIEAMAFGLPIVAFNCSPGVKQLVEHKENGFLCEQNNIEEMVKGLDLLIN 321
Query: 568 NGKL 571
N +L
Sbjct: 322 NPEL 325
>sp|Q8TTI1|Y452_METAC Uncharacterized glycosyltransferase MA_0452 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_0452 PE=3 SV=1
Length = 379
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 40/191 (20%)
Query: 346 YWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKS--HEKYQLRK 403
++K VF + + I+ PDY LP Y+V N P ++ YS EKY+
Sbjct: 149 FYKEVFEKTDKIIIPDYPLP--YTVCRK-NLNFAPKLRGKLF----YSGPLVREKYEDID 201
Query: 404 ENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNS 463
K +V ++ G F Y E P+ K ++ + + G S
Sbjct: 202 SIPLEKPHVVSLIGG--FGYRE-------------PIFRKVLTTAMLDPGINYTLISGPS 246
Query: 464 TDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAM 523
D S+LG + +VR F D + +D V + G S I+ A+
Sbjct: 247 LD---------PSKLGGVPKNVRILNFVEDTYPYIKSSDAV------IAPGGHSTIMEAL 291
Query: 524 TFGIPVIT-PD 533
+FG+P+++ PD
Sbjct: 292 SFGVPILSFPD 302
>sp|Q33568|CYB_TRYBO Cytochrome b OS=Trypanoplasma borreli GN=MT-CYB PE=2 SV=2
Length = 372
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 315 HSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPM 366
H L + + D L +R P Y ER F LL Y + +F +N++ F Y + +
Sbjct: 198 HFFVLHYFLSSDGLLDRFPFYYERFFFFLLYYLRDLFLIINILCFLIYYICI 249
>sp|Q92448|K6PF1_PICPA 6-phosphofructokinase OS=Komagataella pastoris GN=PFK1 PE=3 SV=1
Length = 990
Score = 34.3 bits (77), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 21/118 (17%)
Query: 460 CGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLI 519
C N+ GY DA+++ AS + R F +V G G S + LI
Sbjct: 745 CLNTLSGYCDAVKQSAS-------ASRRRTFVVEVQG----------GYSGYLASYAGLI 787
Query: 520 VRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFART 577
A+ V TP+ PI + V E +++ + +G +R+ +FI N K SK T
Sbjct: 788 TGALA----VYTPENPINLQTVQEDIELLTRTYEEDDGKNRSGKIFIHNEKASKVYTT 841
>sp|A2SRE2|SYM_METLZ Methionine--tRNA ligase OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=metG PE=3 SV=1
Length = 673
Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 473 EVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVR 521
E+ L +E SVR Y F V+G+LL+A YG+S + P +++
Sbjct: 413 EIERSLAAIEESVRAYEFKAAVDGILLLA---AYGNSYISNAAPWKLIK 458
>sp|P71053|EPSD_BACSU Putative glycosyltransferase EpsD OS=Bacillus subtilis (strain 168)
GN=epsD PE=2 SV=1
Length = 381
Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 26/190 (13%)
Query: 397 EKYQLRKENGFLKDEIVVVVVGS-SFFYNELSWDYAVAM--HDVGPLLIKYARRNSVEGS 453
E+ +LR+++GF +D+ ++V + N+ A A+ + L + +A ++E +
Sbjct: 183 EQQRLREKHGFREDDFILVYPAELNLNKNQKQLIEAAALLKEKIPSLRLVFAGEGAMEHT 242
Query: 454 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQ 513
+ Q +A +LG H V YGF D++ ++ +AD+ + +S + +
Sbjct: 243 Y-----------------QTLAEKLGASAH-VCFYGFCSDIHELIQLADVSV--ASSIRE 282
Query: 514 GFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSK 573
G ++ M P I D +E + +G + + +R +L
Sbjct: 283 GLGMNVLEGMAAEQPAIATDNRGHREIIRDGENGFLIKIGDSAAFARRIEQLYHKPEL-- 340
Query: 574 FARTVASAGR 583
R + GR
Sbjct: 341 -CRKLGQEGR 349
>sp|P25740|RFAG_ECOLI Lipopolysaccharide core biosynthesis protein RfaG OS=Escherichia
coli (strain K12) GN=rfaG PE=1 SV=1
Length = 374
Score = 33.9 bits (76), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 24/222 (10%)
Query: 380 PGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGP 439
PG D E S E Y R++NG + + +++ VGS F D ++ +
Sbjct: 167 PGIYPDRKYSEQIPNSREIY--RQKNGIKEQQNLLLQVGSDF--GRKGVDRSI---EALA 219
Query: 440 LLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL 499
L + R N++ +F+ G +AL A +LG+ +V + DV+ ++
Sbjct: 220 SLPESLRHNTL------LFVVGQDKPRKFEAL---AEKLGV-RSNVHFFSGRNDVSELMA 269
Query: 500 MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEG--AQVI---FFQKDN 554
AD++L+ + Q G +++ A+T G+PV+T Y+A+ VI F Q+
Sbjct: 270 AADLLLHPAYQEAAGI--VLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQL 327
Query: 555 PEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVT 596
E L +A + ++ AR A L++ A D +T
Sbjct: 328 NEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIIT 369
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 386,531,707
Number of Sequences: 539616
Number of extensions: 16963895
Number of successful extensions: 44990
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 44964
Number of HSP's gapped (non-prelim): 39
length of query: 1013
length of database: 191,569,459
effective HSP length: 128
effective length of query: 885
effective length of database: 122,498,611
effective search space: 108411270735
effective search space used: 108411270735
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)