Query 001781
Match_columns 1013
No_of_seqs 328 out of 2336
Neff 5.8
Searched_HMMs 29240
Date Tue Mar 26 15:48:15 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001781.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1079-1083//hhsearch_pdb/001781hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fro_A GLGA glycogen synthase; 1.0 1 1 311.6 35.9 356 221-610 1-435 (439)
2 2r60_A Glycosyl transferase, g 1.0 1 1 307.3 32.2 359 222-611 7-465 (499)
3 1rzu_A Glycogen synthase 1; gl 1.0 1 1 304.5 27.5 353 223-611 1-481 (485)
4 3c48_A Predicted glycosyltrans 1.0 1 1 301.8 39.5 361 217-611 15-431 (438)
5 2qzs_A Glycogen synthase; glyc 1.0 1 1 300.6 27.2 350 223-609 1-480 (485)
6 2x6q_A Trehalose-synthase TRET 1.0 1 1 298.5 34.1 339 220-606 38-415 (416)
7 2jjm_A Glycosyl transferase, g 1.0 1 1 294.8 32.5 349 220-609 13-389 (394)
8 3s28_A Sucrose synthase 1; gly 1.0 1 1 294.5 31.6 353 222-606 278-770 (816)
9 3okp_A GDP-mannose-dependent a 1.0 1 1 292.8 30.6 352 220-617 2-391 (394)
10 3vue_A GBSS-I, granule-bound s 1.0 1 1 291.4 23.2 360 218-606 5-512 (536)
No 1
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=1.00 E-value=1 Score=311.60 Aligned_cols=356 Identities=13% Similarity=0.102 Sum_probs=276.6
Q ss_pred CCCEEEEEECCCCC---CCCEEHHHHHHHHHHHCCCEEEEEECCCCCCH-------------------------------
Q ss_conf 99979999645689---98410289999999987988999981899835-------------------------------
Q 001781 221 RPPRIGLILGNMAK---DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH------------------------------- 266 (1013)
Q Consensus 221 r~~RIalI~g~l~~---gg~~l~ll~Lak~L~e~GyeV~Vls~~~g~~~------------------------------- 266 (1013)
+++||+++...+.+ ||.+.++..+++.|.+.||+|.+++.......
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEE
T ss_conf 95289999502177666889999999999999779859998367788236552463014765310243125788408993
Q ss_pred ----------------H-HHH---HHHHHHHHHH-----HCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf ----------------7-999---9999999984-----24963999937544899999999852101468999985999
Q 001781 267 ----------------S-LWE---QIAGQISILG-----QEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVW 321 (1013)
Q Consensus 267 ----------------~-~~k---~l~~LiklLk-----~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~ 321 (1013)
. ..+ ....+..+++ ..+||+||++.+...++..+.++.. ++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~----------~~~~v~ 150 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYF----------KIPAVF 150 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHH----------CCCEEE
T ss_pred CCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCC----------CCCEEE
T ss_conf 5322052124667763002325789999999999974447998199946403434589886526----------997899
Q ss_pred EECCCCCCCCCCHHHH-HHHH-----HHHHHHHHHHCCCCEEEECCCCCHHHHC---CCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 9829841146521234-5599-----8999999974025499974897033211---68999889938999783100013
Q 001781 322 IIQEDSLANRLPVYVE-RGFQ-----NLLSYWKSVFSRVNVIVFPDYTLPMLYS---VLDAGNFFVIPGSPADVWAVEAY 392 (1013)
Q Consensus 322 tiHg~~l~~~~~~y~~-~~l~-----klLsk~~~~l~~AD~VI~~s~~~~~ly~---~l~~~ki~VIPnggVDl~~~~~F 392 (1013)
++|+.........+.. ..+. .........++.+|.+++.+........ .....++.+|||+ +|. +.|
T Consensus 151 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ng-vd~---~~~ 226 (439)
T 3fro_A 151 TIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNG-IDC---SFW 226 (439)
T ss_dssp EESCCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCC-CCT---TTS
T ss_pred EECCCCCCCCCHHHHCCCCCCCCCCCCEEEHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCEEECCCC-CCC---HHC
T ss_conf 9653444568567747455100356663207666554345887268989999860565047734534788-880---430
Q ss_pred CCC-------HHHHHHHHHCCCCCCCEEEEEECCCC-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
Q ss_conf 762-------46799999709999968999982477-7576656899999999998999842056889909999982899
Q 001781 393 SKS-------HEKYQLRKENGFLKDEIVVVVVGSSF-FYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNST 464 (1013)
Q Consensus 393 ~p~-------~~~~~lR~~lgi~~d~~vIL~VGRl~-~yk~~~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~ 464 (1013)
.+. ..+..++++++++++ ++|+++||+. + .||++.+++|+..+..+.. .++++ ++|+|.|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~----~Kg~~~li~a~~~l~~~~~-----~~~~~-l~i~G~g~ 295 (439)
T 3fro_A 227 NESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRG----QKGVDVLLKAIEILSSKKE-----FQEMR-FIIIGKGD 295 (439)
T ss_dssp CGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCT----TBCHHHHHHHHHHHHTSGG-----GGGEE-EEEECCCC
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCC-CEEEEECCCCCC----CCCHHHHHHHHHHHHHCCC-----CCCEE-EEEECCCC
T ss_conf 8432211045669999997399998-479997333534----3669999999999985466-----78718-99980797
Q ss_pred CCCHHHHHHHHHHCCCCCCCEEECC--CCCCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHC
Q ss_conf 6528999999999099997099958--80109999977367899257887896389999999199899839887023121
Q 001781 465 DGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVA 542 (1013)
Q Consensus 465 e~Y~e~LkelakeLgL~dg~V~FlG--~~eDi~~lLaaADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgGi~EiI~ 542 (1013)
..|.+.+++++++++ + .+.|.| +.+++..+|+.||++|+||..| +||++++|||+||+|||+++.++..|++.
T Consensus 296 ~~~~~~l~~~~~~~~--~-~~~~~g~~~~~~~~~~~~~adv~v~ps~~e--~~~~~~~EAma~G~Pvi~s~~~~~~e~~~ 370 (439)
T 3fro_A 296 PELEGWARSLEEKHG--N-VKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGAIPIASAVGGLRDIIT 370 (439)
T ss_dssp HHHHHHHHHHHHHCT--T-EEEECSCCCHHHHHHHHTTCSEEEECBSCC--SSCHHHHHHHHTTCEEEEESSTHHHHHCC
T ss_pred HHHHHHHHHHHHHCC--C-EEEECCCCCHHHHHHHHHHCCEEEECCCCC--CCCHHHHHHHHCCCCEEECCCCCCCEEEE
T ss_conf 267789999875069--8-999728799889999999779999589878--86189999997799769737887431687
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 5984999948999999999999995-9610799999999999999960699999999999999755999
Q 001781 543 EGAQVIFFQKDNPEGLSRAFSLFIS-NGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPS 610 (1013)
Q Consensus 543 dG~tGlLv~p~D~eeLAeAI~~LL~-d~elR~~~~~Mg~aARe~ae~fsse~~i~~y~~Lye~iL~~ps 610 (1013)
++ +|++++++|+++++++|.++++ +++.+ .+|++++++.+++|+|+.++++|.++|+++++...
T Consensus 371 ~~-~g~~~~~~d~~~la~~i~~ll~~~~~~~---~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 435 (439)
T 3fro_A 371 NE-TGILVKAGDPGELANAILKALELSRSDL---SKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRAF 435 (439)
T ss_dssp TT-TCEEECTTCHHHHHHHHHHHHHHTTTTT---HHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCCBC
T ss_pred CC-CEEEECCCCHHHHHHHHHHHHHCCHHHH---HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 58-4489688998999999999983199999---99999999987647299999999999999997544
No 2
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=1.00 E-value=1 Score=307.29 Aligned_cols=359 Identities=11% Similarity=0.079 Sum_probs=273.9
Q ss_pred CCEEEEEECCCC-------------CCCCEEHHHHHHHHHHHCCCEEEEEECCCCCCH----------------------
Q ss_conf 997999964568-------------998410289999999987988999981899835----------------------
Q 001781 222 PPRIGLILGNMA-------------KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH---------------------- 266 (1013)
Q Consensus 222 ~~RIalI~g~l~-------------~gg~~l~ll~Lak~L~e~GyeV~Vls~~~g~~~---------------------- 266 (1013)
++||+++..... .||.+.++.++++.|.+.||+|.+++.......
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 86 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRI 86 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEE
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEE
T ss_conf 52499996577744344234788887994334999999998559848999578872336511356775067898179982
Q ss_pred -----------HHHH----HHHHHHHHHHH--CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC
Q ss_conf -----------7999----99999999842--496399993754489999999985210146899998599998298411
Q 001781 267 -----------SLWE----QIAGQISILGQ--EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLA 329 (1013)
Q Consensus 267 -----------~~~k----~l~~LiklLk~--~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tiHg~~l~ 329 (1013)
..+. ....+.+++++ .+||+||+|.+...++..+.++.. ++|+|+++|+....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~----------~~p~v~~~H~~~~~ 156 (499)
T 2r60_A 87 PFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIK----------GLPFTFTGHSLGAQ 156 (499)
T ss_dssp CCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHH----------CCCEEEECSSCHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHC----------CCCEEEECCCCCCC
T ss_conf 57776776889999989999999999998538998889975786207999988735----------99689980684001
Q ss_pred CCCCH-------HHHHHHH---HHHHHHHHHHCCCCEEEECCCCCHHHHC-----C-C----CCCCEEEECCCCCCCCCC
Q ss_conf 46521-------2345599---8999999974025499974897033211-----6-8----999889938999783100
Q 001781 330 NRLPV-------YVERGFQ---NLLSYWKSVFSRVNVIVFPDYTLPMLYS-----V-L----DAGNFFVIPGSPADVWAV 389 (1013)
Q Consensus 330 ~~~~~-------y~~~~l~---klLsk~~~~l~~AD~VI~~s~~~~~ly~-----~-l----~~~ki~VIPnggVDl~~~ 389 (1013)
..... ....... .........++.+|.+++.+......+. + + +..++.+|||+ +|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ng-vd~--- 232 (499)
T 2r60_A 157 KMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPG-VNT--- 232 (499)
T ss_dssp HHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCC-BCT---
T ss_pred CCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC-CCH---
T ss_conf 1134414787761245567888999999999846899998888999999864124642234678876998799-586---
Q ss_pred CCCCCCH---HHHHHHHHCC-----CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf 0137624---6799999709-----9999689999824777576656899999999998999842056889909999982
Q 001781 390 EAYSKSH---EKYQLRKENG-----FLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCG 461 (1013)
Q Consensus 390 ~~F~p~~---~~~~lR~~lg-----i~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG 461 (1013)
+.|.+.. .+..++.+++ ++++.++|+++||+.+ .||++.+++|+..+.+... ..++ ++|+|
T Consensus 233 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~----~Kg~~~li~a~~~l~~~~~------~~~~-l~i~G 301 (499)
T 2r60_A 233 RVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQ----KKNHYGLVEAYVQNKELQD------KANL-VLTLR 301 (499)
T ss_dssp TTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCG----GGCHHHHHHHHHTCHHHHH------HCEE-EEEES
T ss_pred HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC----CCCHHHHHHHHHHHHHHCC------CCEE-EEEEC
T ss_conf 65686410356789998836433456888768999606850----1588999999999987388------8659-99987
Q ss_pred C--CC----C-------CCHHHHHHHHHHCCCCCCCEEECCCC--CCHHHHHHHC----CEEEECCCCCCCCCCHHHHHH
Q ss_conf 8--99----6-------52899999999909999709995880--1099999773----678992578878963899999
Q 001781 462 N--ST----D-------GYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMA----DIVLYGSSQVEQGFPSLIVRA 522 (1013)
Q Consensus 462 ~--G~----e-------~Y~e~LkelakeLgL~dg~V~FlG~~--eDi~~lLaaA----DIfVlPS~~EEEGFGivILEA 522 (1013)
. ++ . .|.+.++++++++++.+ +|+|+|.. +++..+|+.| |++|+||.+| +||++++||
T Consensus 302 ~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~-~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~E--g~~~~~lEA 378 (499)
T 2r60_A 302 GIENPFEDYSRAGQEEKEILGKIIELIDNNDCRG-KVSMFPLNSQQELAGCYAYLASKGSVFALTSFYE--PFGLAPVEA 378 (499)
T ss_dssp SCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBT-TEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCB--CCCSHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC-EEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCC--CCCCHHHHH
T ss_conf 8887532211113201479999999998649986-0998788998999999995576798899786458--979689999
Q ss_pred HHHCCCEEECCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHH
Q ss_conf 991998998398870231215984999948999999999999995961079999999999999996-0699999999999
Q 001781 523 MTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKN-MLALDCVTRYARI 601 (1013)
Q Consensus 523 MA~GlPVIASdvgGi~EiI~dG~tGlLv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~-fsse~~i~~y~~L 601 (1013)
|+||+|||+++.++..|++.++.+|++++++|+++++++|.++++++++ +.+|++++++.+++ |+|+.++++|.++
T Consensus 379 ma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~~~~---~~~~~~~a~~~~~~~fs~~~~~~~~~~~ 455 (499)
T 2r60_A 379 MASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEET---WSAYQEKGKQRVEERYTWQETARGYLEV 455 (499)
T ss_dssp HHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSCHHH---HHHHHHHHHHHHHHHSBHHHHHHHHHHH
T ss_pred HHCCCCEEEECCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 9769988981688778873478607995899999999999999869999---9999999999998757999999999999
Q ss_pred HHHHHCCCCC
Q ss_conf 9997559999
Q 001781 602 LENVLNFPSD 611 (1013)
Q Consensus 602 ye~iL~~pse 611 (1013)
|+++++....
T Consensus 456 y~~~~~~~~~ 465 (499)
T 2r60_A 456 IQEIADRKDE 465 (499)
T ss_dssp HHHHHHC---
T ss_pred HHHHHHHHHH
T ss_conf 9998732133
No 3
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=1.00 E-value=1 Score=304.52 Aligned_cols=353 Identities=12% Similarity=0.082 Sum_probs=263.8
Q ss_pred CEEEEEECCCCC----CCCEEHHHHHHHHHHHCCCEEEEEECCCCCCH--------------------------------
Q ss_conf 979999645689----98410289999999987988999981899835--------------------------------
Q 001781 223 PRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-------------------------------- 266 (1013)
Q Consensus 223 ~RIalI~g~l~~----gg~~l~ll~Lak~L~e~GyeV~Vls~~~g~~~-------------------------------- 266 (1013)
+||++|...+.+ ||.+.++..+++.|.+.||+|.+++.......
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 80 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEECCCEE
T ss_conf 96999944651565665499999999999997698699991564433444356513689998308747899999669569
Q ss_pred ------HHH--------------------H---HHHHHHHHH----HHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf ------799--------------------9---999999998----4249639999375448999999998521014689
Q 001781 267 ------SLW--------------------E---QIAGQISIL----GQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEP 313 (1013)
Q Consensus 267 ------~~~--------------------k---~l~~LiklL----k~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep 313 (1013)
..+ + ....+.+++ +..+||+||+|.+...++..+.++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~------- 153 (485)
T 1rzu_A 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAET------- 153 (485)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSS-------
T ss_pred EEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCC-------
T ss_conf 9984867727776655886566653067999999999999999861579998899646305578999731035-------
Q ss_pred CCCCCEEEEECCCCCCCCCCHH-------HHH-----H--HHHHHHHHHHHHCCCCEEEECCCCCHHHHCC---------
Q ss_conf 9998599998298411465212-------345-----5--9989999999740254999748970332116---------
Q 001781 314 FHSIPLVWIIQEDSLANRLPVY-------VER-----G--FQNLLSYWKSVFSRVNVIVFPDYTLPMLYSV--------- 370 (1013)
Q Consensus 314 ~~~IPVI~tiHg~~l~~~~~~y-------~~~-----~--l~klLsk~~~~l~~AD~VI~~s~~~~~ly~~--------- 370 (1013)
.++|+|+++|+.......... +.. . ........+..++.+|.+++.+.........
T Consensus 154 -~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~ 232 (485)
T 1rzu_A 154 -PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEG 232 (485)
T ss_dssp -CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHH
T ss_pred -CCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCHHH
T ss_conf -8997899966754468788778734399803202000132562359998886467799608758999835435766589
Q ss_pred ---CCCCCEEEECCCCCCCCCCCCCCCCH------------------HHHHHHHHCCCCCC-CEEEEEECCCCCCCCCCC
Q ss_conf ---89998899389997831000137624------------------67999997099999-689999824777576656
Q 001781 371 ---LDAGNFFVIPGSPADVWAVEAYSKSH------------------EKYQLRKENGFLKD-EIVVVVVGSSFFYNELSW 428 (1013)
Q Consensus 371 ---l~~~ki~VIPnggVDl~~~~~F~p~~------------------~~~~lR~~lgi~~d-~~vIL~VGRl~~yk~~~K 428 (1013)
....++.+|||+ +|. +.|.+.. .+..++.+++++++ .++|+++||+.+ .|
T Consensus 233 ~~~~~~~~~~vi~ng-vd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~----~K 304 (485)
T 1rzu_A 233 VIGSRAHVLHGIVNG-IDA---DVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTW----QK 304 (485)
T ss_dssp HHHTTGGGEEECCCC-BCT---TTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBST----TT
T ss_pred HHHHHCCCCEEECCC-CCC---CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC----CC
T ss_conf 998606881697089-860---2058866511000124324456788699999962988899839999725753----12
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEE-ECCCCCC-HHHHHHHCCEEEE
Q ss_conf 8999999999989998420568899099999828996528999999999099997099-9588010-9999977367899
Q 001781 429 DYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVR-HYGFNGD-VNGVLLMADIVLY 506 (1013)
Q Consensus 429 g~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~LkelakeLgL~dg~V~-FlG~~eD-i~~lLaaADIfVl 506 (1013)
|++.+++|+..+.+ ++++ ++|+|+|+..+.+.+++++++++ + +|+ |.|..++ +..+|+.||++|+
T Consensus 305 g~~~li~a~~~l~~---------~~~~-l~ivG~g~~~~~~~l~~~~~~~~--~-~v~~~~g~~~~~~~~~~~~adv~v~ 371 (485)
T 1rzu_A 305 GIDLMAEAVDEIVS---------LGGR-LVVLGAGDVALEGALLAAASRHH--G-RVGVAIGYNEPLSHLMQAGCDAIII 371 (485)
T ss_dssp THHHHHTTHHHHHH---------TTCE-EEEEECBCHHHHHHHHHHHHHTT--T-TEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred CHHHHHHHHHHHHH---------CCCE-EEEEECCCHHHHHHHHHHHHHCC--C-CEEEECCCCHHHHHHHHHCCCEEEE
T ss_conf 87999999999872---------6956-99996894689999999998678--8-6899438997999999852999997
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHCCC---------CEEEEECCCCHHHHHHHHHHHH---HCCCCHHH
Q ss_conf 25788789638999999919989983988702312159---------8499994899999999999999---59610799
Q 001781 507 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEG---------AQVIFFQKDNPEGLSRAFSLFI---SNGKLSKF 574 (1013)
Q Consensus 507 PS~~EEEGFGivILEAMA~GlPVIASdvgGi~EiI~dG---------~tGlLv~p~D~eeLAeAI~~LL---~d~elR~~ 574 (1013)
||.+| +||++++|||+||+|||+++.+|.+|++.++ .+|++++++|+++++++|.+++ +++++
T Consensus 372 pS~~E--~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~--- 446 (485)
T 1rzu_A 372 PSRFE--PCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKL--- 446 (485)
T ss_dssp CCSCC--SSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHH---
T ss_pred CCCCC--CCCHHHHHHHHCCCCEEEECCCCHHHEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCHHH---
T ss_conf 84468--8777999999779977980899831132156533234567763486789999999999999987279999---
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999999999606999999999999997559999
Q 001781 575 ARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSD 611 (1013)
Q Consensus 575 ~~~Mg~aARe~ae~fsse~~i~~y~~Lye~iL~~pse 611 (1013)
+++|++++++ ++|+|+.++++|.++|+++++.+..
T Consensus 447 ~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~~~~~~ 481 (485)
T 1rzu_A 447 WTQMQKLGMK--SDVSWEKSAGLYAALYSQLISKGHH 481 (485)
T ss_dssp HHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 9999999998--8689699999999999986379988
No 4
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=1.00 E-value=1 Score=301.77 Aligned_cols=361 Identities=18% Similarity=0.198 Sum_probs=276.8
Q ss_pred CCCCCCCEEEEEECCCCC---------CCCEEHHHHHHHHHHHCCCEEEEEECCCCCC----------------------
Q ss_conf 889999979999645689---------9841028999999998798899998189983----------------------
Q 001781 217 RFGVRPPRIGLILGNMAK---------DSRSLLLITVVKNLQKLGYVFKIYAVRSGNS---------------------- 265 (1013)
Q Consensus 217 rfg~r~~RIalI~g~l~~---------gg~~l~ll~Lak~L~e~GyeV~Vls~~~g~~---------------------- 265 (1013)
.-+...+||+++...+.+ +|.+.++..+++.|.+.||+|.+++......
T Consensus 15 ~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~ 94 (438)
T 3c48_A 15 VPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYE 94 (438)
T ss_dssp ----CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSS
T ss_pred CCCCCHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf 65700203345775325634678788787999999999999966997999954788777540025687489992478754
Q ss_pred ----HHHH----HHHHHHHHH-HHHC-CCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHH
Q ss_conf ----5799----999999999-8424-96399993754489999999985210146899998599998298411465212
Q 001781 266 ----HSLW----EQIAGQISI-LGQE-QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVY 335 (1013)
Q Consensus 266 ----~~~~----k~l~~Likl-Lk~~-kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tiHg~~l~~~~~~y 335 (1013)
...+ .....+.+. ++.. +||+||++.+...++..+.++.. ++|+|+++|+..........
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~----------~~p~v~~~h~~~~~~~~~~~ 164 (438)
T 3c48_A 95 GLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLW----------RIPLIHTAHTLAAVKNSYRD 164 (438)
T ss_dssp SCCGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHH----------TCCEEEECSSCHHHHSCC--
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHC----------CCCEEEEECCCCCCCCCCCC
T ss_conf 32366778999999999999998416899989947755789999999974----------99989994277401111100
Q ss_pred ----HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH---CCCCCCCEEEECCCCCCCCCCCCCCCCH--HHHHHHHHCC
Q ss_conf ----345599899999997402549997489703321---1689998899389997831000137624--6799999709
Q 001781 336 ----VERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLY---SVLDAGNFFVIPGSPADVWAVEAYSKSH--EKYQLRKENG 406 (1013)
Q Consensus 336 ----~~~~l~klLsk~~~~l~~AD~VI~~s~~~~~ly---~~l~~~ki~VIPnggVDl~~~~~F~p~~--~~~~lR~~lg 406 (1013)
........+ ....++.+|.+++.+......+ .+++..++.+|||+ +|. ..|.+.. ....++.+++
T Consensus 165 ~~~~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ng-vd~---~~~~~~~~~~~~~~r~~~~ 238 (438)
T 3c48_A 165 DSDTPESEARRIC--EQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPG-ADV---ELYSPGNDRATERSRRELG 238 (438)
T ss_dssp --CCHHHHHHHHH--HHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCC-CCT---TTSCCC----CHHHHHHTT
T ss_pred CCCCCCHHHHHHH--HHHHHHCCCEEEECCHHHHHHHHHHHCCCHHHEEEECCC-CCC---CCCCCCCCCHHHHHHHHCC
T ss_conf 2677315789999--999984089999847999999999858982026882697-661---1047866202456688608
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC----CCCCCHHHHHHHHHHCCCCC
Q ss_conf 99996899998247775766568999999999989998420568899099999828----99652899999999909999
Q 001781 407 FLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN----STDGYNDALQEVASRLGLLE 482 (1013)
Q Consensus 407 i~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~----G~e~Y~e~LkelakeLgL~d 482 (1013)
++++.++|+++||+.+ .||++.+++|+..+.++.+. .+++ ++|+|. |+.. +.++++++++++.+
T Consensus 239 ~~~~~~~i~~~G~~~~----~Kg~~~li~a~~~l~~~~p~-----~~~~-l~i~G~~~~~g~~~--~~l~~~~~~~~l~~ 306 (438)
T 3c48_A 239 IPLHTKVVAFVGRLQP----FKGPQVLIKAVAALFDRDPD-----RNLR-VIICGGPSGPNATP--DTYRHMAEELGVEK 306 (438)
T ss_dssp CCSSSEEEEEESCBSG----GGCHHHHHHHHHHHHHHCTT-----CSEE-EEEECCBC--------CHHHHHHHHTTCTT
T ss_pred CCCCCCEEEEEEEECC----CCCHHHHHHHHHHHHHHCCC-----CCEE-EEEEECCCCCCCHH--HHHHHHHHHCCCCC
T ss_conf 9989848999743156----67989999999999963977-----6669-99981888777278--99999999719878
Q ss_pred CCEEECCCC--CCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHCCCCEEEEECCCCHHHHHH
Q ss_conf 709995880--109999977367899257887896389999999199899839887023121598499994899999999
Q 001781 483 HSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSR 560 (1013)
Q Consensus 483 g~V~FlG~~--eDi~~lLaaADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgGi~EiI~dG~tGlLv~p~D~eeLAe 560 (1013)
+|+|.|.. +++..+|+.||++|+||..| +||++++|||+||+|||+++.++..|++.++.+|+++++.|++++++
T Consensus 307 -~v~~~g~~~~~~~~~~~~~adv~v~ps~~e--~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~ 383 (438)
T 3c48_A 307 -RIRFLDPRPPSELVAVYRAADIVAVPSFNE--SFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWAD 383 (438)
T ss_dssp -TEEEECCCCHHHHHHHHHHCSEEEECCSCC--SSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHH
T ss_pred -CEEECCCCCHHHHHHHHHHCCEEEECCCCC--CCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCEEECCCCCHHHHHH
T ss_conf -689858898588999998589999874026--87559999987699889627987257750797279879999999999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 999999596107999999999999999606999999999999997559999
Q 001781 561 AFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSD 611 (1013)
Q Consensus 561 AI~~LL~d~elR~~~~~Mg~aARe~ae~fsse~~i~~y~~Lye~iL~~pse 611 (1013)
+|.+++++++. +.+|++++++.+++|+|+.++++|.++|+++++.+..
T Consensus 384 ~i~~l~~~~~~---~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T 3c48_A 384 ALATLLDDDET---RIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENV 431 (438)
T ss_dssp HHHHHHHCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHCCHHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999759899---9999999999988579999999999999998631366
No 5
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=1.00 E-value=1 Score=300.55 Aligned_cols=350 Identities=12% Similarity=0.047 Sum_probs=261.2
Q ss_pred CEEEEEECCCC----CCCCEEHHHHHHHHHHHCCCEEEEEECCCCCC---------------------------------
Q ss_conf 97999964568----99841028999999998798899998189983---------------------------------
Q 001781 223 PRIGLILGNMA----KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS--------------------------------- 265 (1013)
Q Consensus 223 ~RIalI~g~l~----~gg~~l~ll~Lak~L~e~GyeV~Vls~~~g~~--------------------------------- 265 (1013)
+||++|...+. .||.+.++..+++.|.+.||+|.+++......
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 80 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCEEE
T ss_conf 96999964104665677399999999999997498789994476434543456405787415687179999987894799
Q ss_pred ----HH-------HH-------------H---HHHHHHHHHHH----CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf ----57-------99-------------9---99999999842----496399993754489999999985210146899
Q 001781 266 ----HS-------LW-------------E---QIAGQISILGQ----EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPF 314 (1013)
Q Consensus 266 ----~~-------~~-------------k---~l~~LiklLk~----~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~ 314 (1013)
.. .+ + ....+.++++. .+||+||+|.+...++..+.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~--------- 151 (485)
T 2qzs_A 81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARG--------- 151 (485)
T ss_dssp EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTT---------
T ss_pred EEECHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCC---------
T ss_conf 97082650689876677545778735899999999999999984567899789960621337899975436---------
Q ss_pred CCCCEEEEECCCCCCCCCCH--H-----HHHH-------HHHHHHHHHHHHCCCCEEEECCCCCHHHHCC----C-----
Q ss_conf 99859999829841146521--2-----3455-------9989999999740254999748970332116----8-----
Q 001781 315 HSIPLVWIIQEDSLANRLPV--Y-----VERG-------FQNLLSYWKSVFSRVNVIVFPDYTLPMLYSV----L----- 371 (1013)
Q Consensus 315 ~~IPVI~tiHg~~l~~~~~~--y-----~~~~-------l~klLsk~~~~l~~AD~VI~~s~~~~~ly~~----l----- 371 (1013)
.++|+|+++|+......... . +... ........+..++.+|.+++.+......... .
T Consensus 152 ~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~ 231 (485)
T 2qzs_A 152 RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGL 231 (485)
T ss_dssp CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHH
T ss_pred CCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCHHHH
T ss_conf 89978999468413578898888764999132131112324654699999875386885688999998540147246899
Q ss_pred ---CC--CCEEEECCCCCCCCCCCCCCCCH------------------HHHHHHHHCCCCC--CCEEEEEECCCCCCCCC
Q ss_conf ---99--98899389997831000137624------------------6799999709999--96899998247775766
Q 001781 372 ---DA--GNFFVIPGSPADVWAVEAYSKSH------------------EKYQLRKENGFLK--DEIVVVVVGSSFFYNEL 426 (1013)
Q Consensus 372 ---~~--~ki~VIPnggVDl~~~~~F~p~~------------------~~~~lR~~lgi~~--d~~vIL~VGRl~~yk~~ 426 (1013)
.. .++.+|||+ +|. +.|.+.. .+..+++++++++ +.++|+++||+.+
T Consensus 232 ~~~~~~~~~~~vi~ng-vd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~---- 303 (485)
T 2qzs_A 232 LQQRHREGRLSGVLNG-VDE---KIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTS---- 303 (485)
T ss_dssp HHHHHHTTCEEECCCC-CCT---TTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESG----
T ss_pred HHHHCCCCCEEEEECC-CCC---CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC----
T ss_conf 9850667866997469-876---64586444222123663006577884999998719888999739999666754----
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEE-ECCCCCC-HHHHHHHCCEE
Q ss_conf 568999999999989998420568899099999828996528999999999099997099-9588010-99999773678
Q 001781 427 SWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVR-HYGFNGD-VNGVLLMADIV 504 (1013)
Q Consensus 427 ~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~LkelakeLgL~dg~V~-FlG~~eD-i~~lLaaADIf 504 (1013)
.||++.+++|+..+.+ ++++ ++|+|.|+..+.+.+++++++++ + +|. |.|..++ +..+|+.||++
T Consensus 304 ~Kg~~~li~a~~~l~~---------~~~~-l~ivG~g~~~~~~~l~~~~~~~~--~-~v~~~~g~~~~~~~~~~~~adv~ 370 (485)
T 2qzs_A 304 QKGLDLVLEALPGLLE---------QGGQ-LALLGAGDPVLQEGFLAAAAEYP--G-QVGVQIGYHEAFSHRIMGGADVI 370 (485)
T ss_dssp GGCHHHHHHHHHHHHH---------TTCE-EEEEEEECHHHHHHHHHHHHHST--T-TEEEEESCCHHHHHHHHHHCSEE
T ss_pred CCCHHHHHHHHHHHHH---------CCCE-EEEEECCCHHHHHHHHHHHHHCC--C-CEEEECCCCHHHHHHHHHHCCEE
T ss_conf 3587999999999862---------7948-99992895678999999997579--9-38994789979999999758899
Q ss_pred EECCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHCCC---------CEEEEECCCCHHHHHHHHHHHH---HCCCCH
Q ss_conf 9925788789638999999919989983988702312159---------8499994899999999999999---596107
Q 001781 505 LYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEG---------AQVIFFQKDNPEGLSRAFSLFI---SNGKLS 572 (1013)
Q Consensus 505 VlPS~~EEEGFGivILEAMA~GlPVIASdvgGi~EiI~dG---------~tGlLv~p~D~eeLAeAI~~LL---~d~elR 572 (1013)
|+||.+| +||++++|||+||+|||+++.+|.+|++.++ .+|++++++|+++++++|.+++ ++++.
T Consensus 371 v~pS~~E--~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~- 447 (485)
T 2qzs_A 371 LVPSRFE--PCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSL- 447 (485)
T ss_dssp EECCSCC--SSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHH-
T ss_pred EECCCCC--CCCHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHH-
T ss_conf 9788567--8767999999779977987899832552157644344466645997789999999999999987089999-
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC
Q ss_conf 9999999999999996069999999999999975599
Q 001781 573 KFARTVASAGRLHAKNMLALDCVTRYARILENVLNFP 609 (1013)
Q Consensus 573 ~~~~~Mg~aARe~ae~fsse~~i~~y~~Lye~iL~~p 609 (1013)
+.+|++++++ ++|+|+.++++|.++|++++..+
T Consensus 448 --~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 448 --WRFVQRQAMA--MDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp --HHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC---
T ss_pred --HHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHH
T ss_conf --9999999876--32898999999999999865421
No 6
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=1.00 E-value=1 Score=298.47 Aligned_cols=339 Identities=13% Similarity=0.124 Sum_probs=261.2
Q ss_pred CCCCEEEEEECCCCCCCCEEHHHHHHHHHHHCCCEEEEEECCCCCCHH---------------------HHHHH----HH
Q ss_conf 999979999645689984102899999999879889999818998357---------------------99999----99
Q 001781 220 VRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS---------------------LWEQI----AG 274 (1013)
Q Consensus 220 ~r~~RIalI~g~l~~gg~~l~ll~Lak~L~e~GyeV~Vls~~~g~~~~---------------------~~k~l----~~ 274 (1013)
++++||+++......||.+.++..+++.|.+.||+|.+++........ .+..+ ..
T Consensus 38 ~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (416)
T 2x6q_A 38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYLNVNRE 117 (416)
T ss_dssp TTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHHH
T ss_pred HHCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHH
T ss_conf 12608999917888887999999999999967975899972698531013145544532465545668889989999999
Q ss_pred HHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99998424963999937544899999999852101468999985999982984114652123455998999999974025
Q 001781 275 QISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRV 354 (1013)
Q Consensus 275 LiklLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tiHg~~l~~~~~~y~~~~l~klLsk~~~~l~~A 354 (1013)
+.+.++..+||+||++......+..+.. ..+|+|++.|+...... ....+. ....+..+
T Consensus 118 ~~~~l~~~~~Dvv~~~~~~~~~~~~~~~------------~~~p~v~~~h~~~~~~~------~~~~~~---~~~~~~~~ 176 (416)
T 2x6q_A 118 NSKFIDLSSFDYVLVHDPQPAALIEFYE------------KKSPWLWRCHIDLSSPN------REFWEF---LRRFVEKY 176 (416)
T ss_dssp HHHSSCGGGSSEEEEESSTTGGGGGGSC------------CCSCEEEECCSCCSSCC------HHHHHH---HHHHHTTS
T ss_pred HHHHHHHCCCCEEEEECCCHHHHHHHHH------------HCCCEEEEECCCCCCCC------HHHHHH---HHHHHHHC
T ss_conf 9998764399889992553556999998------------35989999826667842------779999---99999857
Q ss_pred CEEE-ECCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCCCC----CHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 4999-748970332116899988993899978310001376----24679999970999996899998247775766568
Q 001781 355 NVIV-FPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSK----SHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 429 (1013)
Q Consensus 355 D~VI-~~s~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p----~~~~~~lR~~lgi~~d~~vIL~VGRl~~yk~~~Kg 429 (1013)
+.++ +.+..... .+...++.+|||+ +|. ..+.+ ......++.+++++++.++|+++||+.+ .||
T Consensus 177 ~~~i~~~s~~~~~---~~~~~~~~vi~ng-vd~---~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vGrl~~----~Kg 245 (416)
T 2x6q_A 177 DRYIFHLPEYVQP---ELDRNKAVIMPPS-IDP---LSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDP----WKG 245 (416)
T ss_dssp SEEEESSGGGSCT---TSCTTTEEECCCC-BCT---TSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEECCCCT----TSC
T ss_pred CEEEEECHHHHHH---HCCCCCEEEECCC-CCH---HHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCC----CCC
T ss_conf 9799965699972---2784652894799-785---6642444675668999998389989848999962443----469
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC---CHHHHHHHHHHCCCCCCCEEECCCC-----CCHHHHHHHC
Q ss_conf 9999999999899984205688990999998289965---2899999999909999709995880-----1099999773
Q 001781 430 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG---YNDALQEVASRLGLLEHSVRHYGFN-----GDVNGVLLMA 501 (1013)
Q Consensus 430 ~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~---Y~e~LkelakeLgL~dg~V~FlG~~-----eDi~~lLaaA 501 (1013)
++.+++|+..+.+.. |+++ ++|+|+++.. +.+.++++++++++.+ +|+|.|.. +++..+|+.|
T Consensus 246 ~~~li~a~~~l~~~~-------~~~~-l~i~G~g~~~~~~~~~~l~~~~~~~~~~~-~V~~~G~~~~~~~~~~~~~~~~a 316 (416)
T 2x6q_A 246 IFDVIEIYRKVKEKI-------PGVQ-LLLVGVMAHDDPEGWIYFEKTLRKIGEDY-DVKVLTNLIGVHAREVNAFQRAS 316 (416)
T ss_dssp HHHHHHHHHHHHHHC-------TTCE-EEEEECCCTTCHHHHHHHHHHHHHHTTCT-TEEEEEGGGTCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHC-------CCEE-EEEEECCCCCCHHHHHHHHHHHHHHCCCC-CEEEECCCCCCCHHHHHHHHHHC
T ss_conf 799999999999748-------8818-99996676565567999999999808988-67994466888777899999868
Q ss_pred CEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 67899257887896389999999199899839887023121598499994899999999999999596107999999999
Q 001781 502 DIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASA 581 (1013)
Q Consensus 502 DIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgGi~EiI~dG~tGlLv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~a 581 (1013)
|++|+||..| +||++++|||+||+|||+++.++.+|++.++.+|++++ |+++++++|..++++++. +++|+++
T Consensus 317 d~~v~ps~~E--~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~~~~---~~~~~~~ 389 (416)
T 2x6q_A 317 DVILQMSIRE--GFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKHPEV---SKEMGAK 389 (416)
T ss_dssp SEEEECCSSC--SSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHHHCHHH---HHHHHHH
T ss_pred CEEEECCCCC--CCCCHHHHHHHCCCCEEECCCCCCHHHEECCCCEEEEC--CHHHHHHHHHHHHHCHHH---HHHHHHH
T ss_conf 9999877868--87608999998499899725998751201288869979--999999999999859999---9999999
Q ss_pred HHHHHH-HHCHHHHHHHHHHHHHHHH
Q ss_conf 999999-6069999999999999975
Q 001781 582 GRLHAK-NMLALDCVTRYARILENVL 606 (1013)
Q Consensus 582 ARe~ae-~fsse~~i~~y~~Lye~iL 606 (1013)
+++.++ +|+|+.++++|.++|++++
T Consensus 390 a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 390 AKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 99999887289999999999999960
No 7
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=1.00 E-value=1 Score=294.79 Aligned_cols=349 Identities=15% Similarity=0.143 Sum_probs=269.3
Q ss_pred CCCCEEEEEECCCCCCCCEEHHHHHHHHHHHCCCEEEEEECCCCCC------------------------HHHHHHHHHH
Q ss_conf 9999799996456899841028999999998798899998189983------------------------5799999999
Q 001781 220 VRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS------------------------HSLWEQIAGQ 275 (1013)
Q Consensus 220 ~r~~RIalI~g~l~~gg~~l~ll~Lak~L~e~GyeV~Vls~~~g~~------------------------~~~~k~l~~L 275 (1013)
..++++...... ..||.+.++..+++.|.+.||+|.+++...... ...+.....+
T Consensus 13 ~~~~~~~~~~~p-~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 91 (394)
T 2jjm_A 13 HMKLKIGITCYP-SVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYPPYDLALASKM 91 (394)
T ss_dssp --CCEEEEECCC---CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC----CCSCCHHHHHHHHH
T ss_pred HHEEEEEHHCCC-CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHH
T ss_conf 001455510078-9898789999999999968987999968887762003786289852566654001565207999999
Q ss_pred HHHHHHCCCCEEEECCCCHHH-HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999842496399993754489-9999999852101468999985999982984114652123455998999999974025
Q 001781 276 ISILGQEQYSLIDWSIFDGII-ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRV 354 (1013)
Q Consensus 276 iklLk~~kpDIIh~~~~~~~l-v~~Laak~~~s~l~qep~~~IPVI~tiHg~~l~~~~~~y~~~~l~klLsk~~~~l~~A 354 (1013)
.+++++.+||+||++...... ...+..+... .++|+|+++|+....... ..+. ...+ ....++.+
T Consensus 92 ~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~--------~~~p~v~~~h~~~~~~~~-~~~~---~~~~--~~~~~~~a 157 (394)
T 2jjm_A 92 AEVAQRENLDILHVHYAIPHAICAYLAKQMIG--------ERIKIVTTLHGTDITVLG-SDPS---LNNL--IRFGIEQS 157 (394)
T ss_dssp HHHHHHHTCSEEEECSSTTHHHHHHHHHHHTT--------TCSEEEEECCHHHHHTTT-TCTT---THHH--HHHHHHHS
T ss_pred HHHHHHCCCCEEEECCHHHHHHHHHHHHHHHC--------CCCCEEEEEECCCCCCCC-CCHH---HHHH--HHHHHHHC
T ss_conf 99997769999997243377788999888626--------787779997157521258-8877---8899--99998619
Q ss_pred CEEEECCCCCHHHHCC--CCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHH
Q ss_conf 4999748970332116--89998899389997831000137624679999970999996899998247775766568999
Q 001781 355 NVIVFPDYTLPMLYSV--LDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAV 432 (1013)
Q Consensus 355 D~VI~~s~~~~~ly~~--l~~~ki~VIPnggVDl~~~~~F~p~~~~~~lR~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dl 432 (1013)
|.+++.+......+.. ....++.+|||+ +|. +.|.+. ....++.+++++++.++|+++||+.+ .||++.
T Consensus 158 d~ii~~s~~~~~~~~~~~~~~~~~~vi~ng-v~~---~~~~~~-~~~~~~~~~~~~~~~~~i~~~G~~~~----~Kg~~~ 228 (394)
T 2jjm_A 158 DVVTAVSHSLINETHELVKPNKDIQTVYNF-IDE---RVYFKR-DMTQLKKEYGISESEKILIHISNFRK----VKRVQD 228 (394)
T ss_dssp SEEEESCHHHHHHHHHHTCCSSCEEECCCC-CCT---TTCCCC-CCHHHHHHTTCC---CEEEEECCCCG----GGTHHH
T ss_pred CEEEECCHHHHHHHHHHHCCCCCEEEECCC-CCH---HHCCCC-CHHHHHHHCCCCCCCEEEEEEECCCC----CCCHHH
T ss_conf 989997999999999852876567995587-568---760886-34889987199988808999504665----358899
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCEEEECCCCCC
Q ss_conf 99999998999842056889909999982899652899999999909999709995880109999977367899257887
Q 001781 433 AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVE 512 (1013)
Q Consensus 433 LLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~LkelakeLgL~dg~V~FlG~~eDi~~lLaaADIfVlPS~~EE 512 (1013)
+++|+..+.++ ++++ ++|+|+++.. +.++++++++++.+ +|.|.|+.+++..+|+.||++|+||..|
T Consensus 229 li~a~~~l~~~--------~~~~-l~i~G~g~~~--~~l~~~~~~~~l~~-~v~~~g~~~~~~~~~~~adv~v~ps~~e- 295 (394)
T 2jjm_A 229 VVQAFAKIVTE--------VDAK-LLLVGDGPEF--CTILQLVKNLHIED-RVLFLGKQDNVAELLAMSDLMLLLSEKE- 295 (394)
T ss_dssp HHHHHHHHHHS--------SCCE-EEEECCCTTH--HHHHHHHHTTTCGG-GBCCCBSCSCTHHHHHTCSEEEECCSCC-
T ss_pred HHHHHHHHHHH--------CCCE-EEEECCCHHH--HHHHHHHHHCCCCC-EEEEECCHHHHHHHHHHCCEEEECCCCC-
T ss_conf 99999999853--------7978-9998896579--99999999739987-5999276665999998678999656667-
Q ss_pred CCCCHHHHHHHHHCCCEEECCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-HHHCH
Q ss_conf 89638999999919989983988702312159849999489999999999999959610799999999999999-96069
Q 001781 513 QGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHA-KNMLA 591 (1013)
Q Consensus 513 EGFGivILEAMA~GlPVIASdvgGi~EiI~dG~tGlLv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~a-e~fss 591 (1013)
+||++++|||+||+|||+++.++..|++.++.+|++++++|+++++++|.+++++++. +.+|++++++.+ ++|+|
T Consensus 296 -~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~~---~~~~~~~~~~~~~~~~s~ 371 (394)
T 2jjm_A 296 -SFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEEL---HRNMGERARESVYEQFRS 371 (394)
T ss_dssp -SCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHHSCH
T ss_pred -CCCHHHHHHHHCCCCEEEECCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCHHH---HHHHHHHHHHHHHHHCCH
T ss_conf -8726899999649988981589807776348853996899999999999999749799---999999999999873799
Q ss_pred HHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999975599
Q 001781 592 LDCVTRYARILENVLNFP 609 (1013)
Q Consensus 592 e~~i~~y~~Lye~iL~~p 609 (1013)
++++++|.++|+++++..
T Consensus 372 ~~~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 372 EKIVSQYETIYYDVLRDD 389 (394)
T ss_dssp HHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999666
No 8
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=1.00 E-value=1 Score=294.49 Aligned_cols=353 Identities=11% Similarity=0.081 Sum_probs=257.0
Q ss_pred CCEEEEEECCCC---------C--CCCEEHHHH--------HHHHHHHCCCEEE----EEECCCC---------------
Q ss_conf 997999964568---------9--984102899--------9999998798899----9981899---------------
Q 001781 222 PPRIGLILGNMA---------K--DSRSLLLIT--------VVKNLQKLGYVFK----IYAVRSG--------------- 263 (1013)
Q Consensus 222 ~~RIalI~g~l~---------~--gg~~l~ll~--------Lak~L~e~GyeV~----Vls~~~g--------------- 263 (1013)
..+|++|..... + ||+.+++++ +++.|.+.||+|. ++|-...
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~ 357 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVY 357 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECT
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEC
T ss_conf 24899984776657544578888898365099899899999999999779962001689968987877776577511554
Q ss_pred ----------CCH-------------HHHH---HH--HHHHHHHHH--CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf ----------835-------------7999---99--999999842--49639999375448999999998521014689
Q 001781 264 ----------NSH-------------SLWE---QI--AGQISILGQ--EQYSLIDWSIFDGIIADSLEAKEAISSLMQEP 313 (1013)
Q Consensus 264 ----------~~~-------------~~~k---~l--~~LiklLk~--~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep 313 (1013)
+.. .+|. .+ ..+..+++. .+||+||+|.+.+.+++.++++..
T Consensus 358 ~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~-------- 429 (816)
T 3s28_A 358 DSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKL-------- 429 (816)
T ss_dssp TCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHH--------
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHC--------
T ss_conf 869759999668776654334565778899999999999999999658997399968853899999999975--------
Q ss_pred CCCCCEEEEECCCCCCCCCC--HHH--HH---HHHHHHHHHHHHHCCCCEEEECCCCCHHH-------HCC---------
Q ss_conf 99985999982984114652--123--45---59989999999740254999748970332-------116---------
Q 001781 314 FHSIPLVWIIQEDSLANRLP--VYV--ER---GFQNLLSYWKSVFSRVNVIVFPDYTLPML-------YSV--------- 370 (1013)
Q Consensus 314 ~~~IPVI~tiHg~~l~~~~~--~y~--~~---~l~klLsk~~~~l~~AD~VI~~s~~~~~l-------y~~--------- 370 (1013)
++|+|++.|+........ .+. .. .....+..-...++.+|.||+.+...... |..
T Consensus 430 --gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~L 507 (816)
T 3s28_A 430 --GVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGL 507 (816)
T ss_dssp --TCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTT
T ss_pred --CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf --998899981663001222330155677888898888899999984999998889999999988877644201354112
Q ss_pred --------CCCCCEEEECCCCCCCCCCCCCCCCHHHH------------------HHHHHCCC--CCCCEEEEEECCCCC
Q ss_conf --------89998899389997831000137624679------------------99997099--999689999824777
Q 001781 371 --------LDAGNFFVIPGSPADVWAVEAYSKSHEKY------------------QLRKENGF--LKDEIVVVVVGSSFF 422 (1013)
Q Consensus 371 --------l~~~ki~VIPnggVDl~~~~~F~p~~~~~------------------~lR~~lgi--~~d~~vIL~VGRl~~ 422 (1013)
....++.+|||+ +|. +.|.|..... ..++.+++ ++++++|+++||+.+
T Consensus 508 yr~~~gI~~~~~ki~VIpnG-VD~---~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~ 583 (816)
T 3s28_A 508 YRVVHGIDVFDPKFNIVSPG-ADM---SIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDR 583 (816)
T ss_dssp EEEEESCCTTCTTEEECCCC-CCT---TTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCT
T ss_pred HHCCCCCCCCCCCEEEECCC-CCH---HHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCC
T ss_conf 21012244677887998897-478---87286310355432002320001246056777744457899839999744722
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC---------CCHHHHHHHHHHCCCCCCCEEECCCC--
Q ss_conf 5766568999999999989998420568899099999828996---------52899999999909999709995880--
Q 001781 423 YNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD---------GYNDALQEVASRLGLLEHSVRHYGFN-- 491 (1013)
Q Consensus 423 yk~~~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e---------~Y~e~LkelakeLgL~dg~V~FlG~~-- 491 (1013)
.||++.+++|+..+.+.. ++++ ++|+|.++. .+.+.++++++++++.+ +|.|+|+.
T Consensus 584 ----~KGid~LIeA~~~L~~~~-------~~v~-LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~-~V~flG~~~~ 650 (816)
T 3s28_A 584 ----VKNLSGLVEWYGKNTRLR-------ELAN-LVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNG-QFRWISSQMD 650 (816)
T ss_dssp ----TTTHHHHHHHHHHCHHHH-------HHCE-EEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBB-BEEEECCCCC
T ss_pred ----CCCHHHHHHHHHHHHHHC-------CCEE-EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC-CEEECCCCCC
T ss_conf ----179999999999978557-------9969-99996887533343356999999999999749987-2898167556
Q ss_pred ----CCHHHHHH-HCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHH
Q ss_conf ----10999997-7367899257887896389999999199899839887023121598499994899999999999999
Q 001781 492 ----GDVNGVLL-MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI 566 (1013)
Q Consensus 492 ----eDi~~lLa-aADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgGi~EiI~dG~tGlLv~p~D~eeLAeAI~~LL 566 (1013)
+++..+|+ ++|++|+||.+| +||++++|||+||+|||+++.||.+|++.++.+|++++++|+++++++|.+++
T Consensus 651 ~v~~~eL~~~~~~aaDvfV~PS~~E--gfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL 728 (816)
T 3s28_A 651 RVRNGELYRYICDTKGAFVQPALYE--AFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFF 728 (816)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSCB--SSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCEEEEECCCCC--CCCHHHHHHHHCCCCEEEECCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 6899999999995690999888755--76499999998099999968987699970698189968999999999999999
Q ss_pred ----HCCCCHHHHHHHHHHHHHHH-HHHCHHHHHHHHHHHHHHHH
Q ss_conf ----59610799999999999999-96069999999999999975
Q 001781 567 ----SNGKLSKFARTVASAGRLHA-KNMLALDCVTRYARILENVL 606 (1013)
Q Consensus 567 ----~d~elR~~~~~Mg~aARe~a-e~fsse~~i~~y~~Lye~iL 606 (1013)
.+++. +++|++++++.+ ++|+|+.++++|.++|+...
T Consensus 729 ~~Ll~d~~~---~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g 770 (816)
T 3s28_A 729 TKCKEDPSH---WDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYG 770 (816)
T ss_dssp HHHHHCTHH---HHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHH---HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 875269999---999999999999986899999999999999976
No 9
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=1.00 E-value=1 Score=292.80 Aligned_cols=352 Identities=13% Similarity=0.127 Sum_probs=277.3
Q ss_pred CCCCEEEEEECCCCC--CCCEEHHHHHHHHHHHCCCEEEEEECCCCCC--H-------------------HHHHHHHHHH
Q ss_conf 999979999645689--9841028999999998798899998189983--5-------------------7999999999
Q 001781 220 VRPPRIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNS--H-------------------SLWEQIAGQI 276 (1013)
Q Consensus 220 ~r~~RIalI~g~l~~--gg~~l~ll~Lak~L~e~GyeV~Vls~~~g~~--~-------------------~~~k~l~~Li 276 (1013)
++++||+++.+.+.+ +|.+.++..+++.| .||+|.+++...... . ..+.....+.
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 79 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAMA 79 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCSCHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCCCHHHHHHHHHHHHH--CCCEEEEEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH
T ss_conf 9886699992766886551999999999985--69768999778886424443345662899845654555514699999
Q ss_pred HHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCC-EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 998424963999937544899999999852101468999985-9999829841146521234559989999999740254
Q 001781 277 SILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIP-LVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVN 355 (1013)
Q Consensus 277 klLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IP-VI~tiHg~~l~~~~~~y~~~~l~klLsk~~~~l~~AD 355 (1013)
++++..+||+||++............+. .++| +|+++|+....... .+ ..+.+ ....++.+|
T Consensus 80 ~~~~~~~~Dvv~~~~~~~~~~~~~~~~~----------~~~~~~i~~~h~~~~~~~~--~~---~~~~~--~~~~~~~~d 142 (394)
T 3okp_A 80 EIIREREIDNVWFGAAAPLALMAGTAKQ----------AGASKVIASTHGHEVGWSM--LP---GSRQS--LRKIGTEVD 142 (394)
T ss_dssp HHHHHTTCSEEEESSCTTGGGGHHHHHH----------TTCSEEEEECCSTHHHHTT--SH---HHHHH--HHHHHHHCS
T ss_pred HHHHHCCCCEEEECCCCHHHHHHHHHHH----------CCCCCEEEEECCCHHHHHH--CC---HHHHH--HHHHHHHCC
T ss_conf 9987638988998885448899999975----------1898199993464233321--22---03489--999998679
Q ss_pred EEEECCCCCHHHHC--CCCCCCEEEECCCCCCCCCCCCCCC-C-HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHH
Q ss_conf 99974897033211--6899988993899978310001376-2-467999997099999689999824777576656899
Q 001781 356 VIVFPDYTLPMLYS--VLDAGNFFVIPGSPADVWAVEAYSK-S-HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA 431 (1013)
Q Consensus 356 ~VI~~s~~~~~ly~--~l~~~ki~VIPnggVDl~~~~~F~p-~-~~~~~lR~~lgi~~d~~vIL~VGRl~~yk~~~Kg~d 431 (1013)
.+++.+......+. .....++.+|||+ +|. +.|.+ . ..+..++..++++++.++|+++||+.+ .||++
T Consensus 143 ~ii~~s~~~~~~~~~~~~~~~~~~vi~ng-v~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~----~Kg~~ 214 (394)
T 3okp_A 143 VLTYISQYTLRRFKSAFGSHPTFEHLPSG-VDV---KRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVP----RKGQD 214 (394)
T ss_dssp EEEESCHHHHHHHHHHHCSSSEEEECCCC-BCT---TTSCCCCHHHHHHHHHHTTCCTTCCEEEEESCSCG----GGCHH
T ss_pred EEEECCHHHHHHHHHHCCCCCCEEEECCC-CCH---HHCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCC----CCCHH
T ss_conf 79976889999999841899985883698-588---87588772146899986499857669999764413----45887
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEECCCC--CCHHHHHHHCCEEEECCC
Q ss_conf 999999998999842056889909999982899652899999999909999709995880--109999977367899257
Q 001781 432 VAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSS 509 (1013)
Q Consensus 432 lLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~LkelakeLgL~dg~V~FlG~~--eDi~~lLaaADIfVlPS~ 509 (1013)
.+++|+..+.+.. ++++ ++|+|+++.. +.+++++ .++.+ +|+|.|.. +++..+|+.||++|+||.
T Consensus 215 ~li~a~~~l~~~~-------~~~~-l~i~G~g~~~--~~l~~~~--~~~~~-~v~~~g~~~~~~~~~~~~~ad~~v~ps~ 281 (394)
T 3okp_A 215 SLIKAMPQVIAAR-------PDAQ-LLIVGSGRYE--STLRRLA--TDVSQ-NVKFLGRLEYQDMINTLAAADIFAMPAR 281 (394)
T ss_dssp HHHHHHHHHHHHS-------TTCE-EEEECCCTTH--HHHHHHT--GGGGG-GEEEEESCCHHHHHHHHHHCSEEEECCC
T ss_pred HHHHHHHHHHHHC-------CCEE-EEEECCCHHH--HHHHHHH--HCCCC-EEEECCCCCHHHHHHHHHHCCEEEECCC
T ss_conf 9999999988618-------9869-9998686479--9999987--55457-2999078997899999986899994575
Q ss_pred C-------CCCCCCHHHHHHHHHCCCEEECCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 8-------878963899999991998998398870231215984999948999999999999995961079999999999
Q 001781 510 Q-------VEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAG 582 (1013)
Q Consensus 510 ~-------EEEGFGivILEAMA~GlPVIASdvgGi~EiI~dG~tGlLv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aA 582 (1013)
. | +||++++|||++|+|||+++.++..|++.++ +|++++++|+++++++|.+++++++. +++|++++
T Consensus 282 ~~~~~~~~e--~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~~~~---~~~~~~~~ 355 (394)
T 3okp_A 282 TRGGGLDVE--GLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDDPIR---RAAMGAAG 355 (394)
T ss_dssp CBGGGTBCC--SSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTCHHH---HHHHHHHH
T ss_pred CCCCCCCCC--CCCCHHHHHHHCCCCEEEECCCCHHHHHHCC-CCEEECCCCHHHHHHHHHHHHHCHHH---HHHHHHHH
T ss_conf 556665655--5673999999759979993899737787468-85672899999999999999819999---99999999
Q ss_pred HHHHH-HHCHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99999-606999999999999997559999889998
Q 001781 583 RLHAK-NMLALDCVTRYARILENVLNFPSDALLPGP 617 (1013)
Q Consensus 583 Re~ae-~fsse~~i~~y~~Lye~iL~~pse~~~P~~ 617 (1013)
++.++ +|+|+.++++|.++|+++.........|++
T Consensus 356 ~~~~~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~~~ 391 (394)
T 3okp_A 356 RAHVEAEWSWEIMGERLTNILQSEPRKLAAALEHHH 391 (394)
T ss_dssp HHHHHHHTBHHHHHHHHHHHHHSCCC----------
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHC
T ss_conf 999987479999999999999972037613444302
No 10
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=1.00 E-value=1 Score=291.38 Aligned_cols=360 Identities=10% Similarity=0.061 Sum_probs=249.8
Q ss_pred CCCCCCEEEEEECCCCC----CCCEEHHHHHHHHHHHCCCEEEEEECCCCCC----------------------------
Q ss_conf 89999979999645689----9841028999999998798899998189983----------------------------
Q 001781 218 FGVRPPRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNS---------------------------- 265 (1013)
Q Consensus 218 fg~r~~RIalI~g~l~~----gg~~l~ll~Lak~L~e~GyeV~Vls~~~g~~---------------------------- 265 (1013)
...+.+||++|..++.| ||..-++..|.++|.+.||+|.|+....+..
T Consensus 5 ~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (536)
T 3vue_A 5 HHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYK 84 (536)
T ss_dssp ---CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEE
T ss_pred CCCCCCEEEEEEEECCCHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCEEEEEEECCCEEEEEEEEEEE
T ss_conf 68997389999872431212676999999999999976996999904850222422651689998368337899999997
Q ss_pred ----------------------HHHH------------HHHHH----HHHHHH-------------HCCCCEEEECCCCH
Q ss_conf ----------------------5799------------99999----999984-------------24963999937544
Q 001781 266 ----------------------HSLW------------EQIAG----QISILG-------------QEQYSLIDWSIFDG 294 (1013)
Q Consensus 266 ----------------------~~~~------------k~l~~----LiklLk-------------~~kpDIIh~~~~~~ 294 (1013)
..++ ..+.. ....++ ...+||+|+|.++.
T Consensus 85 ~gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t 164 (536)
T 3vue_A 85 RGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHT 164 (536)
T ss_dssp TTEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGG
T ss_pred CCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEECCCHH
T ss_conf 89559996475541233466778666887567664179999999999999999730265301101479987999776048
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHH--------HHHHH-------------HHHHHHHHHHHCC
Q ss_conf 89999999985210146899998599998298411465212--------34559-------------9899999997402
Q 001781 295 IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVY--------VERGF-------------QNLLSYWKSVFSR 353 (1013)
Q Consensus 295 ~lv~~Laak~~~s~l~qep~~~IPVI~tiHg~~l~~~~~~y--------~~~~l-------------~klLsk~~~~l~~ 353 (1013)
.++..+...... ....+.++|+|+|+|+.......... ..... ...+...+..+..
T Consensus 165 ~l~~~~l~~~~~---~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ 241 (536)
T 3vue_A 165 GPLASYLKNNYQ---PNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILE 241 (536)
T ss_dssp STHHHHHHHHTT---TTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHH---HHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 999999998640---23320256345421574224555533364418965640103333114641003304399999985
Q ss_pred CCEEEECCCCCHHHH-----------CCCCCCCEEEECCCCCCCCCCCCCCCC-------------------HHHHHHHH
Q ss_conf 549997489703321-----------168999889938999783100013762-------------------46799999
Q 001781 354 VNVIVFPDYTLPMLY-----------SVLDAGNFFVIPGSPADVWAVEAYSKS-------------------HEKYQLRK 403 (1013)
Q Consensus 354 AD~VI~~s~~~~~ly-----------~~l~~~ki~VIPnggVDl~~~~~F~p~-------------------~~~~~lR~ 403 (1013)
||.|+++|...+... ......++.+|+|+ ||. +.|.|. ..+..++.
T Consensus 242 ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NG-iD~---~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~ 317 (536)
T 3vue_A 242 ADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNG-MDV---SEWDPSKDKYITAKYDATTAIEAKALNKEALQA 317 (536)
T ss_dssp CSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCC-CCT---TTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHH
T ss_pred CCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECC-CCH---HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 3677876878853431263445220012545781899799-664---214887762100144434555656777999998
Q ss_pred HCCCC--CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf 70999--9968999982477757665689999999999899984205688990999998289965289999999990999
Q 001781 404 ENGFL--KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLL 481 (1013)
Q Consensus 404 ~lgi~--~d~~vIL~VGRl~~yk~~~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~LkelakeLgL~ 481 (1013)
.+|++ ++.++|+++||+.+ +||++.+++|+..+.+ .+.+ ++++|.|+..+...++..+..+ .
T Consensus 318 ~~gl~~d~~~p~i~~vgRl~~----~Kg~~~li~a~~~l~~---------~~~~-l~l~G~G~~~~~~~~~~~~~~~--~ 381 (536)
T 3vue_A 318 EAGLPVDRKIPLIAFIGRLEE----QKGPDVMAAAIPELMQ---------EDVQ-IVLLGTGKKKFEKLLKSMEEKY--P 381 (536)
T ss_dssp HTTSCCCTTSCEEEEECCBSG----GGCHHHHHHHHHHHTT---------SSCE-EEEECCBCHHHHHHHHHHHHHS--T
T ss_pred HCCCCCCCCCCEEEEEEECCC----CCCHHHHHHHHHHHHH---------HCCE-EEEEECCCCHHHHHHHHHHHHC--C
T ss_conf 619987999758999965302----3784789999997685---------4985-9999546726899999987616--8
Q ss_pred CCCEEECC--CCCCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHCCCCEEE----------E
Q ss_conf 97099958--80109999977367899257887896389999999199899839887023121598499----------9
Q 001781 482 EHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVI----------F 549 (1013)
Q Consensus 482 dg~V~FlG--~~eDi~~lLaaADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgGi~EiI~dG~tGl----------L 549 (1013)
+ +|.+.+ ..+++..+|+.||++|+||.+| +||++++|||+||+|||++++||++|+|.|+++|+ +
T Consensus 382 ~-~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E--~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l 458 (536)
T 3vue_A 382 G-KVRAVVKFNAPLAHLIMAGADVLAVPSRFE--PCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKV 458 (536)
T ss_dssp T-TEEEECSCCHHHHHHHHHHCSEEEECCSCC--SSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTC
T ss_pred C-CEEEEEECCHHHHHHHHHHHHEEECCCCCC--CCCHHHHHHHHCCCCEEECCCCCCHHEEECCCCCCCCCCCCCCEEE
T ss_conf 8-549997146888999998623425346568--9888999999869989990799822202279876324667775158
Q ss_pred ECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 948999999999999995961079999999999999996069999999999999975
Q 001781 550 FQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVL 606 (1013)
Q Consensus 550 v~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fsse~~i~~y~~Lye~iL 606 (1013)
+++.|+++++++|.+++..... +..++|++++ ..++|+|++++++|.++|+++.
T Consensus 459 ~~~~d~~~la~ai~ral~~~~~-~~~~~~~~~a--m~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 459 VEPSDVKKVAATLKRAIKVVGT-PAYEEMVRNC--MNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHH--HHSCCSSHHHHHHHHHHHHTTC
T ss_pred ECCCCHHHHHHHHHHHHHHCCC-HHHHHHHHHH--HHHCCCHHHHHHHHHHHHHHHH
T ss_conf 7999999999999999985295-9999999998--7735999999999999999860
Done!