Query 001782
Match_columns 1013
No_of_seqs 1048 out of 6556
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 09:12:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001782.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001782hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1E-113 3E-118 1097.4 64.8 917 33-1009 27-956 (968)
2 PLN00113 leucine-rich repeat r 100.0 3.1E-59 6.6E-64 597.0 30.1 513 100-624 69-588 (968)
3 KOG1187 Serine/threonine prote 100.0 7.7E-45 1.7E-49 401.2 25.9 291 685-1006 61-354 (361)
4 KOG0581 Mitogen-activated prot 100.0 1E-44 2.3E-49 373.7 19.3 253 700-1000 80-335 (364)
5 KOG0595 Serine/threonine-prote 100.0 6.7E-45 1.5E-49 377.6 16.3 267 697-1003 8-290 (429)
6 KOG0192 Tyrosine kinase specif 100.0 1.1E-43 2.3E-48 388.3 22.8 263 700-1011 42-310 (362)
7 KOG0575 Polo-like serine/threo 100.0 7.2E-44 1.6E-48 388.4 20.2 248 699-999 18-268 (592)
8 KOG0615 Serine/threonine prote 100.0 3.4E-44 7.4E-49 371.1 15.5 255 697-1000 170-437 (475)
9 KOG0472 Leucine-rich repeat pr 100.0 3.9E-47 8.4E-52 389.7 -12.3 482 77-597 46-541 (565)
10 KOG0591 NIMA (never in mitosis 100.0 2.6E-44 5.6E-49 353.2 7.0 265 697-1003 17-284 (375)
11 KOG0197 Tyrosine kinases [Sign 100.0 4.7E-43 1E-47 379.1 15.3 263 695-1008 202-465 (468)
12 KOG0593 Predicted protein kina 100.0 1E-42 2.2E-47 345.4 14.4 278 699-999 2-283 (396)
13 KOG0598 Ribosomal protein S6 k 100.0 6.6E-42 1.4E-46 353.0 18.0 238 697-957 23-270 (357)
14 KOG0592 3-phosphoinositide-dep 100.0 3.3E-42 7.3E-47 368.3 16.2 260 695-999 69-337 (604)
15 KOG4194 Membrane glycoprotein 100.0 5.6E-43 1.2E-47 374.3 7.3 408 115-600 45-455 (873)
16 KOG1026 Nerve growth factor re 100.0 1.4E-41 3.1E-46 385.2 17.6 266 698-1007 485-765 (774)
17 KOG0661 MAPK related serine/th 100.0 3E-42 6.6E-47 362.9 10.9 274 698-1000 9-291 (538)
18 KOG0472 Leucine-rich repeat pr 100.0 1.1E-44 2.4E-49 371.7 -7.5 480 97-620 42-541 (565)
19 KOG0659 Cdk activating kinase 100.0 1.1E-40 2.5E-45 325.9 18.2 277 699-1000 2-281 (318)
20 KOG0600 Cdc2-related protein k 100.0 8.8E-41 1.9E-45 354.5 18.2 281 698-999 116-399 (560)
21 KOG0578 p21-activated serine/t 100.0 4.2E-41 9.1E-46 363.9 16.0 252 697-999 271-522 (550)
22 KOG0582 Ste20-like serine/thre 100.0 1.6E-40 3.6E-45 347.1 19.3 266 697-999 24-292 (516)
23 KOG0193 Serine/threonine prote 100.0 3.4E-41 7.4E-46 364.8 13.4 268 692-1008 385-657 (678)
24 KOG0198 MEKK and related serin 100.0 2.8E-40 6.1E-45 349.3 17.1 262 698-1003 16-279 (313)
25 KOG4194 Membrane glycoprotein 100.0 2.2E-41 4.7E-46 362.2 6.2 366 127-570 81-449 (873)
26 KOG4721 Serine/threonine prote 100.0 1.5E-40 3.2E-45 354.2 10.8 246 702-1008 127-372 (904)
27 KOG0597 Serine-threonine prote 100.0 4.1E-40 8.8E-45 351.4 12.9 237 699-960 2-247 (808)
28 KOG0616 cAMP-dependent protein 100.0 2.5E-39 5.4E-44 321.2 17.0 237 698-960 43-288 (355)
29 KOG0660 Mitogen-activated prot 100.0 3.1E-39 6.6E-44 331.7 16.8 285 697-999 20-309 (359)
30 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.1E-38 2.4E-43 358.3 20.7 268 697-1006 5-336 (338)
31 KOG0583 Serine/threonine prote 100.0 1.6E-38 3.6E-43 351.6 20.5 250 696-998 14-273 (370)
32 KOG0201 Serine/threonine prote 100.0 4.1E-40 9E-45 344.4 6.5 250 698-999 12-262 (467)
33 KOG0658 Glycogen synthase kina 100.0 2.9E-39 6.4E-44 332.5 12.4 280 698-999 23-305 (364)
34 KOG0663 Protein kinase PITSLRE 100.0 8.9E-39 1.9E-43 321.9 15.4 277 698-999 75-360 (419)
35 KOG2345 Serine/threonine prote 100.0 9.4E-40 2E-44 316.2 7.8 280 696-1005 18-301 (302)
36 KOG0196 Tyrosine kinase, EPH ( 100.0 1.3E-39 2.9E-44 360.1 9.0 259 701-1007 631-894 (996)
37 KOG1989 ARK protein kinase fam 100.0 9.6E-39 2.1E-43 364.6 16.3 273 697-1007 35-314 (738)
38 KOG1095 Protein tyrosine kinas 100.0 9E-39 2E-43 376.1 16.3 269 698-1010 691-967 (1025)
39 KOG0588 Serine/threonine prote 100.0 2E-38 4.4E-43 346.0 16.3 249 698-1000 11-263 (786)
40 KOG0611 Predicted serine/threo 100.0 1E-38 2.2E-43 327.3 12.9 249 698-1001 52-304 (668)
41 KOG3653 Transforming growth fa 100.0 9.2E-38 2E-42 328.9 20.3 282 699-1009 210-508 (534)
42 KOG0585 Ca2+/calmodulin-depend 100.0 2.9E-38 6.3E-43 332.1 16.5 263 695-1001 93-373 (576)
43 KOG0605 NDR and related serine 100.0 1E-37 2.2E-42 334.7 20.1 212 696-921 138-391 (550)
44 KOG0594 Protein kinase PCTAIRE 100.0 6.9E-38 1.5E-42 323.9 18.0 286 698-1000 10-302 (323)
45 PHA02988 hypothetical protein; 100.0 7.2E-37 1.6E-41 333.6 24.0 251 705-1006 26-281 (283)
46 cd07848 STKc_CDKL5 Catalytic d 100.0 3.3E-37 7.2E-42 338.2 21.5 275 699-999 1-283 (287)
47 KOG0194 Protein tyrosine kinas 100.0 1E-37 2.2E-42 344.2 16.9 266 694-1009 152-425 (474)
48 KOG1094 Discoidin domain recep 100.0 1.1E-37 2.4E-42 334.0 16.2 266 697-1004 536-804 (807)
49 KOG4257 Focal adhesion tyrosin 100.0 1.3E-37 2.9E-42 335.0 16.7 262 694-1006 384-651 (974)
50 cd07859 STKc_TDY_MAPK_plant Ca 100.0 5E-37 1.1E-41 345.4 22.2 275 700-1000 1-290 (338)
51 KOG0694 Serine/threonine prote 100.0 1.2E-37 2.6E-42 343.5 16.6 239 697-959 366-614 (694)
52 KOG0580 Serine/threonine prote 100.0 7.7E-38 1.7E-42 301.8 12.7 251 697-1000 20-273 (281)
53 cd07862 STKc_CDK6 Catalytic do 100.0 1E-36 2.2E-41 334.9 23.2 279 699-999 1-286 (290)
54 cd07871 STKc_PCTAIRE3 Catalyti 100.0 8E-37 1.7E-41 334.8 22.0 277 698-999 4-284 (288)
55 KOG0589 Serine/threonine prote 100.0 8.8E-38 1.9E-42 337.7 13.8 252 699-1000 4-258 (426)
56 cd05612 STKc_PRKX_like Catalyt 100.0 3.6E-37 7.9E-42 337.9 18.2 246 699-1000 1-254 (291)
57 cd07869 STKc_PFTAIRE1 Catalyti 100.0 9.7E-37 2.1E-41 337.0 21.6 277 698-999 4-287 (303)
58 cd05631 STKc_GRK4 Catalytic do 100.0 7.7E-37 1.7E-41 334.4 20.6 252 700-999 1-260 (285)
59 cd06649 PKc_MEK2 Catalytic dom 100.0 1.3E-36 2.9E-41 339.8 22.6 200 698-920 4-204 (331)
60 PHA03212 serine/threonine kina 100.0 1.6E-36 3.5E-41 344.6 23.0 273 698-999 91-375 (391)
61 cd05571 STKc_PKB Catalytic dom 100.0 5E-37 1.1E-41 341.9 18.3 242 705-999 1-250 (323)
62 KOG2052 Activin A type IB rece 100.0 7.4E-37 1.6E-41 319.6 18.1 274 698-1007 210-506 (513)
63 cd05104 PTKc_Kit Catalytic dom 100.0 1.1E-36 2.4E-41 345.5 21.2 265 697-1004 33-374 (375)
64 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 9.6E-37 2.1E-41 341.6 19.6 254 699-1000 1-257 (333)
65 PTZ00263 protein kinase A cata 100.0 5.5E-37 1.2E-41 342.3 17.3 246 698-999 17-270 (329)
66 cd05106 PTKc_CSF-1R Catalytic 100.0 1.2E-36 2.5E-41 344.9 20.1 267 696-1005 35-373 (374)
67 cd05096 PTKc_DDR1 Catalytic do 100.0 3.1E-36 6.7E-41 333.2 22.3 269 698-1003 4-304 (304)
68 KOG4278 Protein tyrosine kinas 100.0 4.2E-37 9.2E-42 330.1 13.4 264 692-1005 260-524 (1157)
69 KOG0444 Cytoskeletal regulator 100.0 5.5E-39 1.2E-43 345.1 -1.2 364 99-570 6-372 (1255)
70 KOG0667 Dual-specificity tyros 100.0 1.3E-36 2.9E-41 336.1 17.4 197 700-921 187-391 (586)
71 cd05595 STKc_PKB_beta Catalyti 100.0 3.1E-36 6.6E-41 335.4 20.3 242 705-999 1-250 (323)
72 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.3E-36 9.2E-41 325.2 20.5 257 698-1004 4-265 (266)
73 cd06650 PKc_MEK1 Catalytic dom 100.0 7.7E-36 1.7E-40 333.5 22.9 200 698-920 4-204 (333)
74 cd05585 STKc_YPK1_like Catalyt 100.0 1.8E-36 3.9E-41 335.9 17.7 240 707-999 1-246 (312)
75 cd05593 STKc_PKB_gamma Catalyt 100.0 3E-36 6.6E-41 336.0 19.5 243 705-1000 1-251 (328)
76 KOG0610 Putative serine/threon 100.0 3.4E-36 7.5E-41 312.5 18.3 247 698-957 76-381 (459)
77 PTZ00426 cAMP-dependent protei 100.0 2.4E-36 5.3E-41 337.6 18.5 248 697-1000 28-284 (340)
78 cd05054 PTKc_VEGFR Catalytic d 100.0 5.7E-36 1.2E-40 334.7 20.9 268 697-1006 5-335 (337)
79 cd05048 PTKc_Ror Catalytic Dom 100.0 7.7E-36 1.7E-40 326.7 21.5 262 698-1003 4-282 (283)
80 KOG0574 STE20-like serine/thre 100.0 1.7E-38 3.7E-43 313.8 0.4 251 699-1000 33-283 (502)
81 cd05105 PTKc_PDGFR_alpha Catal 100.0 6.2E-36 1.3E-40 339.8 20.7 269 695-1006 33-399 (400)
82 PTZ00283 serine/threonine prot 100.0 7.8E-36 1.7E-40 348.4 21.9 267 693-1000 26-297 (496)
83 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.2E-36 1.6E-40 326.8 20.1 270 699-1005 3-282 (283)
84 cd05599 STKc_NDR_like Catalyti 100.0 4.4E-36 9.5E-41 340.8 19.0 209 699-921 1-242 (364)
85 cd05093 PTKc_TrkB Catalytic do 100.0 2.1E-35 4.5E-40 323.9 23.7 267 698-1008 4-283 (288)
86 cd05626 STKc_LATS2 Catalytic d 100.0 8.4E-36 1.8E-40 339.8 21.1 208 700-921 2-251 (381)
87 cd07863 STKc_CDK4 Catalytic do 100.0 1.5E-35 3.2E-40 325.3 22.4 279 700-999 1-284 (288)
88 cd05052 PTKc_Abl Catalytic dom 100.0 2.1E-35 4.6E-40 319.4 23.2 257 698-1004 5-262 (263)
89 PTZ00267 NIMA-related protein 100.0 9.4E-36 2E-40 348.0 22.0 255 699-999 67-322 (478)
90 PTZ00036 glycogen synthase kin 100.0 1E-35 2.2E-40 343.6 21.5 281 697-999 64-350 (440)
91 KOG4279 Serine/threonine prote 100.0 1E-36 2.2E-41 331.3 12.3 245 706-999 582-831 (1226)
92 cd05049 PTKc_Trk Catalytic dom 100.0 1.7E-35 3.7E-40 323.5 22.1 262 698-1003 4-280 (280)
93 KOG0033 Ca2+/calmodulin-depend 100.0 1.2E-37 2.5E-42 300.0 4.3 201 697-920 9-214 (355)
94 KOG0618 Serine/threonine phosp 100.0 1.7E-38 3.7E-43 358.5 -1.8 482 81-619 3-488 (1081)
95 cd05628 STKc_NDR1 Catalytic do 100.0 1.2E-35 2.7E-40 336.3 21.5 208 699-920 1-238 (363)
96 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.9E-36 1.1E-40 338.9 18.2 258 699-1000 1-285 (350)
97 KOG0599 Phosphorylase kinase g 100.0 1.2E-36 2.6E-41 297.4 11.2 256 695-1000 13-283 (411)
98 cd08228 STKc_Nek6 Catalytic do 100.0 1.9E-35 4.2E-40 320.6 21.9 262 699-1005 2-266 (267)
99 cd05035 PTKc_Axl_like Catalyti 100.0 4.2E-35 9E-40 319.1 24.5 265 701-1004 1-272 (273)
100 cd05094 PTKc_TrkC Catalytic do 100.0 2.8E-35 6E-40 323.4 23.1 267 698-1008 4-286 (291)
101 cd05148 PTKc_Srm_Brk Catalytic 100.0 7.8E-36 1.7E-40 322.5 18.4 258 696-1004 3-261 (261)
102 cd07876 STKc_JNK2 Catalytic do 100.0 2.2E-35 4.9E-40 334.0 22.3 282 697-1000 19-315 (359)
103 cd05108 PTKc_EGFR Catalytic do 100.0 1.3E-35 2.9E-40 329.8 20.1 259 699-1007 7-271 (316)
104 cd05075 PTKc_Axl Catalytic dom 100.0 4.5E-35 9.8E-40 318.6 23.9 265 701-1004 1-271 (272)
105 cd05589 STKc_PKN Catalytic dom 100.0 1E-35 2.2E-40 331.7 19.2 197 701-920 1-203 (324)
106 PF07714 Pkinase_Tyr: Protein 100.0 7.8E-36 1.7E-40 321.4 17.5 251 703-1001 3-259 (259)
107 PRK13184 pknD serine/threonine 100.0 1.7E-35 3.6E-40 352.1 21.5 272 699-1006 2-292 (932)
108 cd05596 STKc_ROCK Catalytic do 100.0 1.2E-35 2.6E-40 336.4 19.4 257 695-1000 39-304 (370)
109 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.8E-35 8.3E-40 316.0 22.4 252 699-1002 4-256 (256)
110 cd05592 STKc_nPKC_theta_delta 100.0 1.4E-35 3E-40 329.0 19.4 239 705-996 1-243 (316)
111 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.4E-35 7.3E-40 325.7 22.4 276 699-999 6-285 (309)
112 cd05584 STKc_p70S6K Catalytic 100.0 1.9E-35 4E-40 329.3 20.4 242 705-999 2-255 (323)
113 cd05111 PTK_HER3 Pseudokinase 100.0 5.3E-35 1.1E-39 318.9 23.6 259 699-1007 7-271 (279)
114 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.7E-35 3.6E-40 324.2 19.6 276 698-1005 3-284 (284)
115 cd05590 STKc_nPKC_eta Catalyti 100.0 1.5E-35 3.3E-40 329.3 19.6 194 705-920 1-198 (320)
116 PLN00034 mitogen-activated pro 100.0 1.6E-35 3.6E-40 334.1 20.1 250 698-1000 73-328 (353)
117 cd05594 STKc_PKB_alpha Catalyt 100.0 9E-36 2E-40 332.3 17.8 243 705-1000 1-252 (325)
118 cd07853 STKc_NLK Catalytic dom 100.0 1.7E-35 3.6E-40 336.6 20.3 279 700-1000 1-288 (372)
119 cd05605 STKc_GRK4_like Catalyt 100.0 2.4E-35 5.1E-40 322.7 20.3 253 700-1000 1-261 (285)
120 cd05598 STKc_LATS Catalytic do 100.0 1E-35 2.2E-40 339.1 18.2 209 699-921 1-247 (376)
121 cd06646 STKc_MAP4K5 Catalytic 100.0 1.7E-35 3.7E-40 321.0 18.9 255 698-1000 8-265 (267)
122 cd05587 STKc_cPKC Catalytic do 100.0 1.8E-35 3.9E-40 329.7 19.6 199 700-920 1-203 (324)
123 cd05629 STKc_NDR_like_fungal C 100.0 1.4E-35 3.1E-40 337.8 19.2 208 699-920 1-250 (377)
124 cd07875 STKc_JNK1 Catalytic do 100.0 2.6E-35 5.6E-40 334.2 21.1 282 697-1000 22-318 (364)
125 cd05062 PTKc_IGF-1R Catalytic 100.0 4.1E-35 8.8E-40 319.8 21.9 263 697-1003 4-277 (277)
126 cd05588 STKc_aPKC Catalytic do 100.0 4E-35 8.8E-40 327.3 22.2 194 705-920 1-198 (329)
127 cd05033 PTKc_EphR Catalytic do 100.0 3.7E-35 8.1E-40 318.1 21.3 258 698-1004 3-265 (266)
128 KOG0577 Serine/threonine prote 100.0 1.2E-36 2.7E-41 325.6 9.3 196 700-921 27-228 (948)
129 cd05575 STKc_SGK Catalytic dom 100.0 1.7E-35 3.7E-40 329.8 18.9 238 705-995 1-242 (323)
130 PTZ00284 protein kinase; Provi 100.0 2.1E-35 4.5E-40 345.4 20.4 280 692-999 122-437 (467)
131 cd05072 PTKc_Lyn Catalytic dom 100.0 2.5E-35 5.4E-40 318.5 19.4 255 698-1003 5-260 (261)
132 cd07874 STKc_JNK3 Catalytic do 100.0 2.6E-35 5.7E-40 333.1 20.4 282 697-1000 15-311 (355)
133 cd05591 STKc_nPKC_epsilon Cata 100.0 1.7E-35 3.7E-40 329.5 18.5 242 705-999 1-253 (321)
134 cd05621 STKc_ROCK2 Catalytic d 100.0 2.4E-35 5.2E-40 333.4 19.5 206 693-920 37-249 (370)
135 cd05625 STKc_LATS1 Catalytic d 100.0 2.3E-35 5.1E-40 336.7 19.5 208 700-921 2-251 (382)
136 cd05619 STKc_nPKC_theta Cataly 100.0 3.3E-35 7.1E-40 325.9 20.0 241 705-998 1-246 (316)
137 cd05618 STKc_aPKC_iota Catalyt 100.0 3.7E-35 8E-40 327.4 20.3 194 705-920 1-198 (329)
138 cd05614 STKc_MSK2_N N-terminal 100.0 2.7E-35 5.9E-40 329.8 19.3 252 700-999 1-266 (332)
139 cd05607 STKc_GRK7 Catalytic do 100.0 7E-35 1.5E-39 317.5 21.9 248 707-1001 1-251 (277)
140 cd05620 STKc_nPKC_delta Cataly 100.0 3.8E-35 8.2E-40 325.5 20.1 241 705-998 1-246 (316)
141 cd05616 STKc_cPKC_beta Catalyt 100.0 3.4E-35 7.4E-40 327.3 19.8 200 700-921 1-204 (323)
142 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.2E-34 2.6E-39 314.4 23.4 262 699-1005 2-266 (267)
143 cd05570 STKc_PKC Catalytic dom 100.0 3.8E-35 8.2E-40 326.0 19.9 242 705-999 1-251 (318)
144 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.8E-35 1.3E-39 328.1 21.5 267 698-1006 6-341 (343)
145 KOG0444 Cytoskeletal regulator 100.0 5.4E-38 1.2E-42 337.4 -3.0 368 76-554 7-379 (1255)
146 cd05608 STKc_GRK1 Catalytic do 100.0 5.5E-35 1.2E-39 318.9 20.6 248 707-999 1-256 (280)
147 cd05604 STKc_SGK3 Catalytic do 100.0 2.3E-35 5.1E-40 329.0 18.0 242 705-999 1-246 (325)
148 cd05109 PTKc_HER2 Catalytic do 100.0 8.6E-35 1.9E-39 317.6 22.0 261 698-1008 6-272 (279)
149 cd05045 PTKc_RET Catalytic dom 100.0 7.7E-35 1.7E-39 319.8 21.7 263 700-1006 1-288 (290)
150 cd06654 STKc_PAK1 Catalytic do 100.0 7.3E-35 1.6E-39 320.5 21.3 253 697-1000 18-270 (296)
151 cd05053 PTKc_FGFR Catalytic do 100.0 8E-35 1.7E-39 320.3 21.6 267 695-1005 8-292 (293)
152 cd05084 PTKc_Fes Catalytic dom 100.0 6.6E-35 1.4E-39 313.4 20.3 249 705-1002 1-251 (252)
153 cd05602 STKc_SGK1 Catalytic do 100.0 3E-35 6.6E-40 328.1 18.3 242 705-999 1-246 (325)
154 cd05068 PTKc_Frk_like Catalyti 100.0 7.1E-35 1.5E-39 314.9 20.7 257 697-1004 4-261 (261)
155 cd05071 PTKc_Src Catalytic dom 100.0 9.8E-35 2.1E-39 313.8 21.5 255 698-1004 5-260 (262)
156 cd06637 STKc_TNIK Catalytic do 100.0 7.4E-35 1.6E-39 317.0 20.6 260 695-999 2-268 (272)
157 cd05036 PTKc_ALK_LTK Catalytic 100.0 1E-34 2.2E-39 316.6 21.7 262 697-1002 4-276 (277)
158 cd05601 STKc_CRIK Catalytic do 100.0 1.9E-35 4.1E-40 330.8 16.3 253 699-999 1-262 (330)
159 cd06645 STKc_MAP4K3 Catalytic 100.0 4.1E-35 9E-40 318.0 18.3 254 698-999 8-264 (267)
160 cd08229 STKc_Nek7 Catalytic do 100.0 7E-35 1.5E-39 316.2 20.1 262 699-1005 2-266 (267)
161 cd05622 STKc_ROCK1 Catalytic d 100.0 5.7E-35 1.2E-39 330.7 20.2 208 691-920 35-249 (371)
162 cd05089 PTKc_Tie1 Catalytic do 100.0 1.7E-34 3.6E-39 318.1 23.4 263 699-1008 2-279 (297)
163 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.2E-34 2.5E-39 312.1 21.4 252 699-1002 4-256 (256)
164 cd05082 PTKc_Csk Catalytic dom 100.0 1.9E-34 4E-39 310.7 23.0 251 698-1004 5-256 (256)
165 cd05092 PTKc_TrkA Catalytic do 100.0 1.5E-34 3.2E-39 315.7 22.2 262 698-1003 4-280 (280)
166 cd05060 PTKc_Syk_like Catalyti 100.0 2.6E-34 5.6E-39 309.8 23.6 251 705-1005 1-256 (257)
167 cd08219 STKc_Nek3 Catalytic do 100.0 1.2E-34 2.5E-39 312.1 20.8 251 700-1000 1-252 (255)
168 cd05055 PTKc_PDGFR Catalytic d 100.0 1.3E-34 2.8E-39 319.5 21.6 261 697-1004 33-301 (302)
169 cd07878 STKc_p38beta_MAPK11 Ca 100.0 9.5E-35 2.1E-39 327.0 20.9 279 697-1000 13-298 (343)
170 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.4E-34 3E-39 319.6 21.8 278 698-999 5-285 (301)
171 cd05090 PTKc_Ror1 Catalytic do 100.0 1.1E-34 2.4E-39 317.3 20.9 261 699-1003 5-282 (283)
172 KOG1025 Epidermal growth facto 100.0 8.1E-36 1.8E-40 330.9 11.8 257 700-1006 697-959 (1177)
173 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.2E-34 2.7E-39 323.1 21.3 194 705-920 1-198 (327)
174 cd05116 PTKc_Syk Catalytic dom 100.0 3.1E-34 6.6E-39 309.1 23.5 249 706-1004 2-255 (257)
175 KOG4717 Serine/threonine prote 100.0 4.9E-35 1.1E-39 308.5 16.7 250 697-999 16-269 (864)
176 PF00069 Pkinase: Protein kina 100.0 1E-34 2.2E-39 313.6 19.8 253 701-999 1-256 (260)
177 cd05043 PTK_Ryk Pseudokinase d 100.0 2.1E-34 4.6E-39 314.7 22.5 268 697-1007 4-279 (280)
178 PTZ00266 NIMA-related protein 100.0 6.1E-35 1.3E-39 348.4 19.7 263 693-999 7-294 (1021)
179 cd08529 STKc_FA2-like Catalyti 100.0 2.5E-34 5.5E-39 309.7 22.7 251 700-1000 1-253 (256)
180 KOG0596 Dual specificity; seri 100.0 9.4E-36 2E-40 318.5 11.3 253 698-999 360-626 (677)
181 KOG0584 Serine/threonine prote 100.0 1.2E-35 2.7E-40 324.5 12.4 248 702-999 43-295 (632)
182 cd06638 STKc_myosinIIIA Cataly 100.0 1.2E-34 2.5E-39 317.9 20.3 270 689-1000 8-283 (286)
183 cd05088 PTKc_Tie2 Catalytic do 100.0 1.9E-34 4E-39 318.5 22.0 263 698-1007 6-283 (303)
184 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.1E-34 4.6E-39 318.9 22.5 268 698-1009 17-304 (307)
185 cd06615 PKc_MEK Catalytic doma 100.0 2E-34 4.3E-39 319.0 22.1 264 699-1000 1-287 (308)
186 cd06625 STKc_MEKK3_like Cataly 100.0 2.3E-34 4.9E-39 311.4 22.1 254 699-1000 2-260 (263)
187 cd05101 PTKc_FGFR2 Catalytic d 100.0 3E-34 6.5E-39 317.4 23.4 268 696-1007 12-299 (304)
188 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3.5E-34 7.5E-39 309.3 23.3 254 698-1003 5-259 (260)
189 cd05615 STKc_cPKC_alpha Cataly 100.0 1.1E-34 2.5E-39 322.8 20.1 200 700-921 1-204 (323)
190 cd06619 PKc_MKK5 Catalytic dom 100.0 2.7E-34 5.8E-39 313.5 22.5 252 699-1000 1-253 (279)
191 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.4E-34 3.1E-39 328.4 21.0 268 695-1005 33-400 (401)
192 cd06655 STKc_PAK2 Catalytic do 100.0 1E-34 2.2E-39 319.2 19.3 252 697-999 17-268 (296)
193 cd05032 PTKc_InsR_like Catalyt 100.0 1.9E-34 4.1E-39 314.6 21.3 262 698-1003 5-277 (277)
194 PHA03211 serine/threonine kina 100.0 1.8E-34 3.8E-39 331.1 21.9 275 698-1000 168-455 (461)
195 cd05115 PTKc_Zap-70 Catalytic 100.0 3.1E-34 6.7E-39 308.8 22.5 250 706-1004 2-255 (257)
196 cd07868 STKc_CDK8 Catalytic do 100.0 3.8E-34 8.2E-39 318.7 24.0 204 704-921 6-219 (317)
197 cd05091 PTKc_Ror2 Catalytic do 100.0 1.8E-34 4E-39 315.7 21.1 261 699-1003 5-282 (283)
198 cd05059 PTKc_Tec_like Catalyti 100.0 3.4E-34 7.3E-39 308.6 22.6 251 699-1001 4-255 (256)
199 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.1E-34 8.8E-39 317.6 23.9 268 697-1008 10-297 (314)
200 cd05095 PTKc_DDR2 Catalytic do 100.0 1.4E-34 3E-39 318.7 19.8 269 698-1003 4-296 (296)
201 cd05630 STKc_GRK6 Catalytic do 100.0 2E-34 4.3E-39 315.2 20.9 252 700-999 1-260 (285)
202 cd05603 STKc_SGK2 Catalytic do 100.0 9.9E-35 2.1E-39 323.5 18.8 194 705-920 1-198 (321)
203 cd05051 PTKc_DDR Catalytic dom 100.0 1.4E-34 2.9E-39 319.1 19.7 268 698-1002 4-295 (296)
204 cd05582 STKc_RSK_N N-terminal 100.0 4.6E-35 1E-39 325.7 16.0 239 705-996 2-245 (318)
205 cd05627 STKc_NDR2 Catalytic do 100.0 8E-35 1.7E-39 329.5 18.3 209 699-921 1-239 (360)
206 cd07861 STKc_CDK1_euk Catalyti 100.0 2.7E-34 5.9E-39 314.8 21.9 275 700-999 1-281 (285)
207 cd06639 STKc_myosinIIIB Cataly 100.0 1.5E-34 3.3E-39 317.7 19.9 270 688-999 11-286 (291)
208 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.2E-34 2.7E-39 317.1 19.0 274 699-1004 4-283 (284)
209 cd06656 STKc_PAK3 Catalytic do 100.0 1.9E-34 4E-39 317.5 20.5 252 697-999 17-268 (297)
210 cd06613 STKc_MAP4K3_like Catal 100.0 2.7E-34 5.8E-39 310.7 21.3 255 698-999 2-259 (262)
211 cd05061 PTKc_InsR Catalytic do 100.0 2.2E-34 4.8E-39 315.8 20.8 265 697-1005 4-279 (288)
212 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.6E-34 1E-38 313.2 23.3 277 699-999 1-282 (286)
213 KOG0579 Ste20-like serine/thre 100.0 5.7E-36 1.2E-40 322.1 7.7 252 699-999 32-288 (1187)
214 KOG0032 Ca2+/calmodulin-depend 100.0 1.5E-34 3.3E-39 319.2 19.3 253 697-1000 33-293 (382)
215 KOG0199 ACK and related non-re 100.0 2.2E-35 4.8E-40 322.0 12.4 255 700-1002 111-370 (1039)
216 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.4E-34 9.5E-39 310.0 22.6 254 700-999 1-263 (267)
217 cd05632 STKc_GRK5 Catalytic do 100.0 2.3E-34 4.9E-39 314.9 20.4 253 700-1000 1-261 (285)
218 cd07839 STKc_CDK5 Catalytic do 100.0 1.9E-34 4E-39 315.9 19.6 275 700-999 1-280 (284)
219 cd05097 PTKc_DDR_like Catalyti 100.0 3.5E-34 7.6E-39 315.3 21.9 268 698-1002 4-294 (295)
220 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.5E-34 5.5E-39 312.0 20.3 259 698-1004 4-267 (268)
221 cd06643 STKc_SLK Catalytic dom 100.0 1.9E-34 4.1E-39 315.4 19.2 251 700-999 6-261 (282)
222 PHA03207 serine/threonine kina 100.0 2.6E-34 5.7E-39 328.4 21.2 274 698-1000 91-375 (392)
223 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3E-34 6.5E-39 314.1 20.6 263 698-1001 4-267 (284)
224 cd06611 STKc_SLK_like Catalyti 100.0 1.7E-34 3.7E-39 315.4 18.4 254 698-1000 4-262 (280)
225 cd06624 STKc_ASK Catalytic dom 100.0 5.6E-34 1.2E-38 309.2 22.1 257 694-999 3-264 (268)
226 cd08227 PK_STRAD_alpha Pseudok 100.0 2.3E-34 5E-39 321.5 19.6 281 703-999 2-306 (327)
227 cd05065 PTKc_EphR_B Catalytic 100.0 2.6E-34 5.7E-39 312.0 19.5 260 699-1004 4-268 (269)
228 cd05039 PTKc_Csk_like Catalyti 100.0 4.1E-34 8.9E-39 308.0 20.8 251 698-1004 5-256 (256)
229 cd05069 PTKc_Yes Catalytic dom 100.0 6.7E-34 1.5E-38 307.0 22.4 254 698-1003 5-259 (260)
230 cd06644 STKc_STK10_LOK Catalyt 100.0 3.7E-34 8E-39 314.7 20.8 253 698-999 11-268 (292)
231 cd05050 PTKc_Musk Catalytic do 100.0 3.2E-34 6.9E-39 314.7 20.2 263 697-1003 3-288 (288)
232 cd05597 STKc_DMPK_like Catalyt 100.0 2.8E-34 6.1E-39 320.8 20.1 202 699-920 1-210 (331)
233 cd05058 PTKc_Met_Ron Catalytic 100.0 5.5E-34 1.2E-38 308.2 21.7 256 705-1006 1-261 (262)
234 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4E-34 8.6E-39 312.9 20.7 266 689-999 6-278 (282)
235 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.7E-34 8.1E-39 309.1 20.2 255 697-1003 4-259 (260)
236 cd05066 PTKc_EphR_A Catalytic 100.0 7.1E-34 1.5E-38 308.1 22.2 259 698-1004 3-266 (267)
237 cd05056 PTKc_FAK Catalytic dom 100.0 3.6E-34 7.8E-39 311.1 19.8 258 698-1006 5-267 (270)
238 cd05100 PTKc_FGFR3 Catalytic d 100.0 8.1E-34 1.8E-38 318.1 23.1 266 698-1007 11-296 (334)
239 cd05057 PTKc_EGFR_like Catalyt 100.0 1.1E-33 2.5E-38 308.7 23.7 260 698-1007 6-271 (279)
240 cd07844 STKc_PCTAIRE_like Cata 100.0 6.5E-34 1.4E-38 312.8 21.9 275 698-999 4-287 (291)
241 cd05047 PTKc_Tie Catalytic dom 100.0 1E-33 2.2E-38 307.4 22.8 254 705-1005 1-269 (270)
242 PHA03209 serine/threonine kina 100.0 4.5E-34 9.7E-39 322.3 20.6 192 698-918 65-256 (357)
243 cd06612 STKc_MST1_2 Catalytic 100.0 4.2E-34 9.1E-39 308.0 19.4 251 698-999 2-252 (256)
244 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.1E-34 8.9E-39 313.3 19.6 276 699-1005 4-284 (284)
245 cd08223 STKc_Nek4 Catalytic do 100.0 1E-33 2.2E-38 305.2 22.0 252 700-1000 1-254 (257)
246 cd06608 STKc_myosinIII_like Ca 100.0 5.7E-34 1.2E-38 310.5 20.0 262 696-999 3-271 (275)
247 cd06651 STKc_MEKK3 Catalytic d 100.0 1.3E-33 2.7E-38 306.0 22.2 254 699-999 2-260 (266)
248 cd05034 PTKc_Src_like Catalyti 100.0 6.5E-34 1.4E-38 307.5 19.8 256 697-1003 4-260 (261)
249 KOG0604 MAP kinase-activated p 100.0 8.7E-35 1.9E-39 288.5 11.7 258 697-999 59-321 (400)
250 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 6.7E-34 1.4E-38 309.2 19.6 240 706-1002 2-274 (274)
251 cd07867 STKc_CDC2L6 Catalytic 100.0 2.4E-33 5.2E-38 312.4 24.5 204 704-921 6-219 (317)
252 cd00192 PTKc Catalytic domain 100.0 1.4E-33 3E-38 305.0 21.9 254 705-1002 1-262 (262)
253 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.3E-33 2.8E-38 304.8 21.4 240 705-1001 1-261 (262)
254 cd05040 PTKc_Ack_like Catalyti 100.0 1E-33 2.2E-38 305.2 20.6 251 705-1002 1-256 (257)
255 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1E-33 2.3E-38 307.2 20.8 257 705-1002 1-268 (269)
256 cd08221 STKc_Nek9 Catalytic do 100.0 2.1E-33 4.5E-38 302.6 22.9 251 700-1000 1-253 (256)
257 cd05110 PTKc_HER4 Catalytic do 100.0 1.1E-33 2.4E-38 312.5 21.2 260 698-1007 6-271 (303)
258 cd06640 STKc_MST4 Catalytic do 100.0 1.9E-33 4.2E-38 306.4 22.9 249 699-1000 4-253 (277)
259 cd05623 STKc_MRCK_alpha Cataly 100.0 6.1E-34 1.3E-38 318.4 19.3 202 699-920 1-210 (332)
260 cd05586 STKc_Sck1_like Catalyt 100.0 3.6E-34 7.7E-39 320.3 17.2 192 707-920 1-199 (330)
261 cd05624 STKc_MRCK_beta Catalyt 100.0 4.8E-34 1E-38 318.9 18.2 202 699-920 1-210 (331)
262 cd07846 STKc_CDKL2_3 Catalytic 100.0 5E-34 1.1E-38 312.9 17.9 277 699-999 1-282 (286)
263 cd07849 STKc_ERK1_2_like Catal 100.0 1.1E-33 2.4E-38 317.2 21.1 282 698-1000 4-292 (336)
264 cd06631 STKc_YSK4 Catalytic do 100.0 1.7E-33 3.6E-38 305.0 21.7 255 700-999 1-261 (265)
265 cd06609 STKc_MST3_like Catalyt 100.0 1.5E-33 3.2E-38 307.0 21.4 249 699-999 1-250 (274)
266 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.7E-34 5.8E-39 309.7 15.2 241 705-1002 1-258 (258)
267 cd08218 STKc_Nek1 Catalytic do 100.0 1.8E-33 4E-38 303.0 21.6 251 700-1000 1-253 (256)
268 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.6E-33 3.4E-38 306.7 21.2 265 701-1004 1-272 (273)
269 KOG4645 MAPKKK (MAP kinase kin 100.0 1.4E-35 2.9E-40 345.6 5.2 257 697-1000 1233-1494(1509)
270 cd06652 STKc_MEKK2 Catalytic d 100.0 2E-33 4.4E-38 304.3 21.8 254 699-999 2-260 (265)
271 cd05073 PTKc_Hck Catalytic dom 100.0 1.4E-33 3.1E-38 304.4 20.3 255 697-1003 4-259 (260)
272 cd05574 STKc_phototropin_like 100.0 1.3E-33 2.7E-38 314.3 20.3 260 699-999 1-288 (316)
273 KOG0983 Mitogen-activated prot 100.0 9.2E-35 2E-39 284.5 9.7 253 698-999 91-348 (391)
274 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.9E-33 4.1E-38 309.0 21.3 278 697-999 3-287 (291)
275 KOG4250 TANK binding protein k 100.0 2.3E-34 5.1E-39 318.3 14.0 288 700-1006 14-312 (732)
276 cd07832 STKc_CCRK Catalytic do 100.0 3E-33 6.6E-38 306.7 22.7 275 700-1000 1-282 (286)
277 cd05112 PTKc_Itk Catalytic dom 100.0 2.6E-33 5.7E-38 301.8 21.7 253 698-1002 3-256 (256)
278 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.3E-33 5E-38 307.6 21.5 255 699-1000 1-262 (286)
279 cd07850 STKc_JNK Catalytic dom 100.0 2E-33 4.3E-38 317.3 21.6 282 697-1000 14-311 (353)
280 cd05044 PTKc_c-ros Catalytic d 100.0 1.3E-33 2.8E-38 306.6 19.2 255 705-1003 1-269 (269)
281 cd05083 PTKc_Chk Catalytic dom 100.0 2E-33 4.4E-38 302.2 20.5 247 699-1003 6-253 (254)
282 cd06658 STKc_PAK5 Catalytic do 100.0 8.3E-34 1.8E-38 311.4 17.5 251 699-1000 22-272 (292)
283 cd06642 STKc_STK25-YSK1 Cataly 100.0 8.7E-34 1.9E-38 309.3 17.6 249 699-1000 4-253 (277)
284 cd05042 PTKc_Aatyk Catalytic d 100.0 1.7E-33 3.6E-38 305.7 19.7 257 705-1002 1-268 (269)
285 cd06630 STKc_MEKK1 Catalytic d 100.0 2.1E-33 4.5E-38 304.8 20.4 256 700-999 1-263 (268)
286 cd07841 STKc_CDK7 Catalytic do 100.0 2.9E-33 6.2E-38 308.8 21.8 276 700-1000 1-282 (298)
287 KOG0607 MAP kinase-interacting 100.0 1.8E-34 3.9E-39 288.2 10.8 203 704-921 83-294 (463)
288 KOG0618 Serine/threonine phosp 100.0 1.4E-36 3.1E-41 343.1 -4.7 465 104-622 2-467 (1081)
289 cd05046 PTK_CCK4 Pseudokinase 100.0 1.2E-33 2.7E-38 307.8 18.5 260 699-1002 5-274 (275)
290 PHA02882 putative serine/threo 100.0 2.8E-33 6E-38 307.5 21.3 269 698-1001 11-293 (294)
291 cd08217 STKc_Nek2 Catalytic do 100.0 2.9E-33 6.3E-38 303.0 21.2 255 700-1000 1-262 (265)
292 cd06626 STKc_MEKK4 Catalytic d 100.0 3.9E-33 8.5E-38 301.9 22.0 255 700-999 1-260 (264)
293 cd07860 STKc_CDK2_3 Catalytic 100.0 2.7E-33 6E-38 306.7 20.9 275 700-999 1-280 (284)
294 cd05041 PTKc_Fes_like Catalyti 100.0 2.8E-33 6.1E-38 300.6 20.4 249 705-1003 1-251 (251)
295 cd06632 STKc_MEKK1_plant Catal 100.0 3.3E-33 7.1E-38 301.4 21.0 248 700-999 1-254 (258)
296 cd06647 STKc_PAK_I Catalytic d 100.0 1.6E-33 3.5E-38 309.4 18.9 252 698-1000 18-269 (293)
297 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.8E-33 6.1E-38 304.5 20.6 255 700-999 2-268 (272)
298 cd08220 STKc_Nek8 Catalytic do 100.0 3.1E-33 6.8E-38 301.2 20.7 249 700-999 1-252 (256)
299 cd05609 STKc_MAST Catalytic do 100.0 3.1E-33 6.7E-38 309.3 21.1 263 699-1003 1-273 (305)
300 KOG1035 eIF-2alpha kinase GCN2 100.0 2.7E-34 5.9E-39 333.4 13.0 267 696-999 476-870 (1351)
301 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8.8E-33 1.9E-37 302.9 24.2 264 699-999 1-265 (287)
302 cd05085 PTKc_Fer Catalytic dom 100.0 3.3E-33 7.1E-38 299.9 20.4 247 705-1002 1-249 (250)
303 KOG0666 Cyclin C-dependent kin 100.0 1.4E-34 3.1E-39 288.2 9.0 289 698-1000 23-337 (438)
304 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.7E-33 5.9E-38 302.2 19.9 238 705-1001 1-258 (259)
305 cd07833 STKc_CDKL Catalytic do 100.0 1.9E-33 4.1E-38 308.7 18.9 275 699-999 1-284 (288)
306 cd06659 STKc_PAK6 Catalytic do 100.0 1.8E-33 4E-38 309.4 18.2 250 700-1000 22-271 (297)
307 cd06605 PKc_MAPKK Catalytic do 100.0 2E-33 4.3E-38 304.5 18.2 254 699-999 1-256 (265)
308 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.8E-33 8.2E-38 305.4 20.5 254 699-999 1-260 (283)
309 cd05580 STKc_PKA Catalytic dom 100.0 4.9E-33 1.1E-37 305.4 20.9 245 699-999 1-253 (290)
310 cd06610 STKc_OSR1_SPAK Catalyt 100.0 5.9E-33 1.3E-37 301.1 21.3 261 699-999 1-263 (267)
311 cd07845 STKc_CDK10 Catalytic d 100.0 8.6E-33 1.9E-37 306.5 23.0 281 698-1000 6-290 (309)
312 KOG0986 G protein-coupled rece 100.0 6.7E-34 1.5E-38 297.1 13.0 247 698-965 184-442 (591)
313 cd07843 STKc_CDC2L1 Catalytic 100.0 5.1E-33 1.1E-37 305.9 20.8 279 698-999 4-289 (293)
314 cd06648 STKc_PAK_II Catalytic 100.0 5.4E-33 1.2E-37 304.0 20.7 249 700-999 20-268 (285)
315 cd06623 PKc_MAPKK_plant_like C 100.0 1.2E-32 2.6E-37 298.1 23.3 253 699-1000 1-256 (264)
316 smart00219 TyrKc Tyrosine kina 100.0 1.1E-32 2.3E-37 297.4 22.7 252 701-1001 1-258 (258)
317 cd07855 STKc_ERK5 Catalytic do 100.0 5.2E-33 1.1E-37 311.5 21.0 285 698-1000 4-294 (334)
318 cd07865 STKc_CDK9 Catalytic do 100.0 7.7E-33 1.7E-37 307.4 21.3 286 697-999 10-306 (310)
319 KOG0690 Serine/threonine prote 100.0 6.4E-34 1.4E-38 284.5 11.2 241 698-961 167-416 (516)
320 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.7E-32 3.6E-37 297.4 23.3 256 705-1002 1-267 (268)
321 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.5E-33 1.2E-37 311.6 20.2 282 698-1000 4-291 (337)
322 cd07836 STKc_Pho85 Catalytic d 100.0 1.4E-32 2.9E-37 301.2 22.6 275 700-999 1-280 (284)
323 cd07842 STKc_CDK8_like Catalyt 100.0 2.2E-32 4.8E-37 304.5 24.4 283 700-999 1-312 (316)
324 cd07837 STKc_CdkB_plant Cataly 100.0 1.4E-32 3E-37 302.9 22.4 285 699-999 1-290 (295)
325 cd07852 STKc_MAPK15 Catalytic 100.0 1.1E-32 2.4E-37 309.4 21.6 280 697-1000 5-295 (337)
326 cd06917 STKc_NAK1_like Catalyt 100.0 1E-32 2.2E-37 301.0 20.6 248 700-999 2-254 (277)
327 cd08528 STKc_Nek10 Catalytic d 100.0 9.9E-33 2.1E-37 299.6 20.1 255 700-1002 1-268 (269)
328 cd07831 STKc_MOK Catalytic dom 100.0 2.4E-32 5.2E-37 298.9 22.8 274 701-999 1-278 (282)
329 cd06607 STKc_TAO Catalytic dom 100.0 1.4E-32 3.1E-37 304.3 21.2 248 698-1000 14-267 (307)
330 KOG0586 Serine/threonine prote 100.0 3.1E-33 6.8E-38 305.6 15.5 202 697-921 54-258 (596)
331 cd05578 STKc_Yank1 Catalytic d 100.0 5.3E-33 1.1E-37 299.8 17.2 248 700-998 1-253 (258)
332 cd06614 STKc_PAK Catalytic dom 100.0 1.4E-32 3E-37 301.4 20.7 254 696-999 16-269 (286)
333 cd08226 PK_STRAD_beta Pseudoki 100.0 1.2E-32 2.6E-37 307.7 20.7 282 705-999 4-307 (328)
334 cd07835 STKc_CDK1_like Catalyt 100.0 1.3E-32 2.9E-37 301.0 20.6 274 701-999 1-279 (283)
335 cd05633 STKc_GRK3 Catalytic do 100.0 1.7E-32 3.8E-37 298.9 21.2 243 706-1000 1-255 (279)
336 PHA03390 pk1 serine/threonine- 100.0 2.7E-32 5.8E-37 295.3 22.3 251 691-999 6-261 (267)
337 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.4E-32 9.6E-37 293.5 24.0 254 699-999 2-260 (264)
338 cd07840 STKc_CDK9_like Catalyt 100.0 2.9E-32 6.3E-37 299.1 22.8 278 701-999 1-283 (287)
339 cd06641 STKc_MST3 Catalytic do 100.0 2.3E-32 5.1E-37 297.9 21.8 249 699-1000 4-253 (277)
340 cd07838 STKc_CDK4_6_like Catal 100.0 4.2E-32 9.1E-37 297.8 23.6 278 701-999 1-283 (287)
341 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.5E-32 3.2E-37 308.6 20.1 284 698-999 4-299 (342)
342 KOG0669 Cyclin T-dependent kin 100.0 1.8E-34 3.9E-39 279.1 3.8 211 698-921 16-232 (376)
343 cd07866 STKc_BUR1 Catalytic do 100.0 2E-32 4.4E-37 304.1 20.8 289 698-999 7-307 (311)
344 PHA03210 serine/threonine kina 100.0 6.5E-33 1.4E-37 325.0 17.7 283 697-1000 146-454 (501)
345 cd07834 STKc_MAPK Catalytic do 100.0 1.7E-32 3.7E-37 307.2 20.1 282 700-1000 1-289 (330)
346 cd07864 STKc_CDK12 Catalytic d 100.0 3.8E-32 8.2E-37 300.5 22.3 284 696-999 4-298 (302)
347 cd06657 STKc_PAK4 Catalytic do 100.0 1.3E-32 2.9E-37 301.6 18.2 248 701-999 22-269 (292)
348 cd05122 PKc_STE Catalytic doma 100.0 3.5E-32 7.7E-37 292.1 20.9 250 700-999 1-250 (253)
349 cd07879 STKc_p38delta_MAPK13 C 100.0 3.8E-32 8.2E-37 305.3 21.7 282 698-1005 14-304 (342)
350 PLN00009 cyclin-dependent kina 100.0 4.1E-32 9E-37 298.8 21.5 277 699-999 2-283 (294)
351 cd06616 PKc_MKK4 Catalytic dom 100.0 1.5E-32 3.2E-37 301.5 17.9 259 699-1000 4-267 (288)
352 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.7E-32 1E-36 302.3 22.0 280 693-1000 4-288 (328)
353 cd08216 PK_STRAD Pseudokinase 100.0 4.6E-32 1E-36 301.5 21.7 276 711-1000 12-295 (314)
354 cd08215 STKc_Nek Catalytic dom 100.0 6.7E-32 1.4E-36 291.1 22.3 252 700-999 1-254 (258)
355 cd08225 STKc_Nek5 Catalytic do 100.0 1.9E-32 4.1E-37 295.3 17.9 251 700-1000 1-254 (257)
356 cd06635 STKc_TAO1 Catalytic do 100.0 5.8E-32 1.2E-36 300.7 22.0 247 700-1001 26-278 (317)
357 cd06606 STKc_MAPKKK Catalytic 100.0 5.7E-32 1.2E-36 291.9 21.3 254 700-999 1-256 (260)
358 cd05579 STKc_MAST_like Catalyt 100.0 1.5E-32 3.3E-37 297.4 16.6 253 707-1002 1-256 (265)
359 KOG0671 LAMMER dual specificit 100.0 2.7E-33 5.8E-38 288.4 9.8 276 698-999 88-405 (415)
360 cd05577 STKc_GRK Catalytic dom 100.0 5E-32 1.1E-36 295.4 20.5 245 707-999 1-253 (277)
361 cd05572 STKc_cGK_PKG Catalytic 100.0 3.2E-32 6.9E-37 294.4 18.8 243 707-999 1-251 (262)
362 cd07857 STKc_MPK1 Catalytic do 100.0 7E-32 1.5E-36 302.1 21.9 283 700-999 1-291 (332)
363 cd07880 STKc_p38gamma_MAPK12 C 100.0 7.3E-32 1.6E-36 302.9 21.7 278 696-999 12-297 (343)
364 cd07877 STKc_p38alpha_MAPK14 C 100.0 7.2E-32 1.6E-36 303.2 21.6 285 692-1000 10-300 (345)
365 cd06627 STKc_Cdc7_like Catalyt 100.0 7.5E-32 1.6E-36 290.1 20.2 248 700-999 1-250 (254)
366 cd05118 STKc_CMGC Catalytic do 100.0 1E-31 2.3E-36 294.0 21.4 272 701-999 1-279 (283)
367 cd07830 STKc_MAK_like Catalyti 100.0 9E-32 1.9E-36 294.5 20.6 275 701-999 1-279 (283)
368 cd05611 STKc_Rim15_like Cataly 100.0 7.3E-32 1.6E-36 291.2 19.6 244 705-1001 2-249 (260)
369 PTZ00024 cyclin-dependent prot 100.0 1.1E-31 2.4E-36 301.1 21.5 284 698-999 7-312 (335)
370 cd05606 STKc_beta_ARK Catalyti 100.0 1.8E-31 3.9E-36 290.9 22.1 242 706-999 1-254 (278)
371 KOG0662 Cyclin-dependent kinas 100.0 3E-32 6.5E-37 250.3 13.2 275 700-999 3-282 (292)
372 KOG1024 Receptor-like protein 100.0 5E-32 1.1E-36 277.7 15.9 275 691-1008 276-559 (563)
373 cd06618 PKc_MKK7 Catalytic dom 100.0 8.6E-32 1.9E-36 296.5 18.8 254 697-1000 13-273 (296)
374 cd06634 STKc_TAO2 Catalytic do 100.0 1.2E-31 2.7E-36 296.7 20.0 250 698-1002 14-269 (308)
375 cd08530 STKc_CNK2-like Catalyt 100.0 1.1E-31 2.3E-36 289.3 18.7 250 700-999 1-252 (256)
376 cd05581 STKc_PDK1 Catalytic do 100.0 8.5E-32 1.8E-36 294.2 17.9 256 699-999 1-276 (280)
377 KOG0587 Traf2- and Nck-interac 100.0 7.4E-32 1.6E-36 303.9 17.4 267 689-999 9-281 (953)
378 KOG1290 Serine/threonine prote 100.0 9.7E-32 2.1E-36 283.8 16.9 137 698-843 77-221 (590)
379 cd06633 STKc_TAO3 Catalytic do 100.0 3.1E-31 6.7E-36 294.1 22.0 246 700-1000 22-273 (313)
380 cd07829 STKc_CDK_like Catalyti 100.0 2.6E-31 5.7E-36 290.7 20.8 273 701-999 1-278 (282)
381 KOG1151 Tousled-like protein k 100.0 4.8E-33 1E-37 288.5 6.1 212 698-921 462-687 (775)
382 cd05583 STKc_MSK_N N-terminal 100.0 2.2E-31 4.7E-36 292.2 19.5 257 700-1004 1-267 (288)
383 KOG0200 Fibroblast/platelet-de 100.0 2.7E-31 5.9E-36 315.5 21.8 269 695-1005 292-580 (609)
384 KOG1006 Mitogen-activated prot 100.0 1E-33 2.2E-38 276.4 0.8 254 704-999 69-326 (361)
385 cd07851 STKc_p38 Catalytic dom 100.0 1.5E-31 3.3E-36 300.6 17.8 279 697-999 13-297 (343)
386 cd05613 STKc_MSK1_N N-terminal 100.0 4.2E-31 9.2E-36 290.2 20.1 252 700-999 1-267 (290)
387 KOG4236 Serine/threonine prote 100.0 5.4E-32 1.2E-36 286.4 12.1 237 704-962 569-817 (888)
388 cd05610 STKc_MASTL Catalytic d 100.0 3.5E-31 7.6E-36 319.9 21.0 148 698-859 3-153 (669)
389 KOG0612 Rho-associated, coiled 100.0 1.5E-32 3.2E-37 316.5 8.2 209 691-920 67-283 (1317)
390 KOG0696 Serine/threonine prote 100.0 3.4E-32 7.4E-37 280.1 9.6 245 698-965 348-602 (683)
391 cd08222 STKc_Nek11 Catalytic d 100.0 4.6E-31 1E-35 285.0 18.1 251 700-999 1-256 (260)
392 KOG0603 Ribosomal protein S6 k 100.0 2.7E-31 5.8E-36 292.2 14.0 241 697-999 320-562 (612)
393 cd05123 STKc_AGC Catalytic dom 100.0 1.7E-30 3.7E-35 278.8 18.5 237 707-996 1-240 (250)
394 KOG0984 Mitogen-activated prot 100.0 2.2E-31 4.8E-36 250.7 9.7 218 697-933 44-267 (282)
395 cd05576 STKc_RPK118_like Catal 100.0 2.2E-30 4.7E-35 275.1 16.3 222 710-996 4-225 (237)
396 PLN03225 Serine/threonine-prot 100.0 1.2E-29 2.7E-34 298.2 20.7 279 697-1000 130-450 (566)
397 KOG0614 cGMP-dependent protein 100.0 1.5E-31 3.2E-36 282.6 3.2 199 700-921 421-622 (732)
398 KOG0695 Serine/threonine prote 100.0 3.1E-30 6.6E-35 258.9 12.4 242 697-960 248-506 (593)
399 KOG0668 Casein kinase II, alph 100.0 2.7E-30 5.9E-35 246.8 10.0 276 697-999 36-321 (338)
400 KOG0664 Nemo-like MAPK-related 100.0 6.9E-31 1.5E-35 256.8 3.5 205 700-921 54-261 (449)
401 smart00220 S_TKc Serine/Threon 100.0 7.6E-29 1.7E-33 264.4 17.9 239 711-999 1-240 (244)
402 KOG1027 Serine/threonine prote 100.0 7E-30 1.5E-34 286.7 8.5 246 702-998 512-765 (903)
403 PLN03224 probable serine/threo 100.0 1.5E-28 3.1E-33 281.0 19.5 276 696-999 142-499 (507)
404 KOG0608 Warts/lats-like serine 100.0 1.1E-28 2.3E-33 266.8 13.1 215 699-927 629-880 (1034)
405 KOG1152 Signal transduction se 100.0 4.1E-29 8.9E-34 268.4 9.4 200 697-920 559-771 (772)
406 KOG0670 U4/U6-associated splic 100.0 2.5E-29 5.4E-34 266.5 6.2 277 697-999 430-745 (752)
407 KOG1345 Serine/threonine kinas 100.0 1.6E-28 3.5E-33 240.7 10.4 255 698-1001 23-285 (378)
408 KOG0665 Jun-N-terminal kinase 99.9 4E-28 8.7E-33 244.4 9.6 275 698-999 16-309 (369)
409 KOG0576 Mitogen-activated prot 99.9 8.4E-29 1.8E-33 270.6 3.5 202 697-920 13-217 (829)
410 KOG1167 Serine/threonine prote 99.9 4.4E-27 9.6E-32 246.5 12.7 287 694-999 31-380 (418)
411 KOG4237 Extracellular matrix p 99.9 1.2E-28 2.6E-33 254.0 -0.7 398 163-594 60-498 (498)
412 cd00180 PKc Catalytic domain o 99.9 1E-25 2.2E-30 234.5 20.6 211 707-1000 1-214 (215)
413 smart00221 STYKc Protein kinas 99.9 2E-25 4.3E-30 235.1 18.3 200 701-920 1-202 (225)
414 KOG4237 Extracellular matrix p 99.9 4.8E-27 1E-31 242.3 -2.1 271 103-427 70-358 (498)
415 PLN03210 Resistant to P. syrin 99.9 1.3E-23 2.7E-28 268.6 25.1 343 95-570 553-903 (1153)
416 PLN03210 Resistant to P. syrin 99.9 2.4E-23 5.2E-28 266.1 21.7 127 438-595 777-904 (1153)
417 smart00750 KIND kinase non-cat 99.9 1.9E-23 4.1E-28 210.8 15.1 172 786-1007 1-172 (176)
418 PRK15387 E3 ubiquitin-protein 99.9 1.8E-23 3.8E-28 246.9 15.6 264 198-580 202-465 (788)
419 PRK15387 E3 ubiquitin-protein 99.9 3.5E-23 7.5E-28 244.4 16.9 115 124-283 201-315 (788)
420 PLN00181 protein SPA1-RELATED; 99.9 4.6E-24 1E-28 265.0 9.8 207 752-999 28-264 (793)
421 PRK09188 serine/threonine prot 99.9 2.9E-23 6.3E-28 227.5 14.6 175 695-893 14-195 (365)
422 KOG1165 Casein kinase (serine/ 99.9 3.4E-22 7.3E-27 202.2 18.9 208 699-923 28-241 (449)
423 KOG1164 Casein kinase (serine/ 99.9 6.4E-22 1.4E-26 219.0 23.0 269 700-1007 19-300 (322)
424 PRK15370 E3 ubiquitin-protein 99.9 1.6E-22 3.5E-27 240.8 17.1 99 416-525 326-428 (754)
425 KOG1163 Casein kinase (serine/ 99.9 6.3E-22 1.4E-26 191.4 14.8 208 698-922 14-225 (341)
426 KOG0195 Integrin-linked kinase 99.9 2.8E-23 6E-28 203.6 4.0 249 701-1005 192-447 (448)
427 PRK15370 E3 ubiquitin-protein 99.9 1.5E-21 3.3E-26 232.5 12.0 204 100-332 178-381 (754)
428 KOG0590 Checkpoint kinase and 99.8 1E-21 2.2E-26 230.0 7.4 257 702-999 321-584 (601)
429 COG0515 SPS1 Serine/threonine 99.8 4.6E-19 9.9E-24 199.3 22.1 264 701-1000 2-275 (384)
430 KOG4158 BRPK/PTEN-induced prot 99.8 5.8E-20 1.3E-24 190.0 11.8 206 754-1001 274-511 (598)
431 PRK10359 lipopolysaccharide co 99.8 3.2E-20 6.8E-25 188.6 9.3 176 697-912 29-216 (232)
432 cd05147 RIO1_euk RIO kinase fa 99.8 1.2E-19 2.5E-24 183.4 12.0 139 704-860 2-167 (190)
433 PF14531 Kinase-like: Kinase-l 99.8 8.9E-20 1.9E-24 190.9 9.1 243 699-991 12-288 (288)
434 KOG1240 Protein kinase contain 99.8 4.2E-20 9.2E-25 213.4 6.3 250 700-1001 24-292 (1431)
435 cd05145 RIO1_like RIO kinase f 99.8 9.7E-19 2.1E-23 177.8 14.6 139 704-861 2-168 (190)
436 PRK12274 serine/threonine prot 99.8 8.4E-19 1.8E-23 173.7 11.8 192 702-920 5-209 (218)
437 KOG0617 Ras suppressor protein 99.8 2.1E-20 4.6E-25 171.4 -2.1 177 413-619 31-211 (264)
438 KOG0617 Ras suppressor protein 99.8 5.2E-20 1.1E-24 168.9 0.2 164 389-559 31-195 (264)
439 KOG1166 Mitotic checkpoint ser 99.8 1.2E-18 2.6E-23 207.0 11.2 201 693-917 692-902 (974)
440 KOG1023 Natriuretic peptide re 99.7 6.8E-18 1.5E-22 187.9 12.9 217 750-1006 1-226 (484)
441 PRK10345 hypothetical protein; 99.7 1.9E-17 4.1E-22 168.5 14.5 141 701-857 4-156 (210)
442 smart00090 RIO RIO-like kinase 99.7 3E-17 6.4E-22 171.7 12.9 142 700-860 29-198 (237)
443 cd00116 LRR_RI Leucine-rich re 99.7 4E-19 8.7E-24 198.0 -2.2 280 274-596 2-319 (319)
444 KOG0603 Ribosomal protein S6 k 99.7 1.2E-18 2.7E-23 192.8 0.8 221 706-959 1-233 (612)
445 cd00116 LRR_RI Leucine-rich re 99.7 4.3E-19 9.4E-24 197.7 -3.0 288 201-572 2-319 (319)
446 KOG1033 eIF-2alpha kinase PEK/ 99.7 3.4E-18 7.3E-23 185.8 3.7 129 774-913 329-457 (516)
447 PLN03150 hypothetical protein; 99.7 4.1E-17 9E-22 194.7 11.2 149 32-183 369-525 (623)
448 cd05144 RIO2_C RIO kinase fami 99.7 6.9E-16 1.5E-20 158.4 13.3 142 694-860 10-175 (198)
449 KOG0606 Microtubule-associated 99.6 2.5E-16 5.4E-21 182.8 7.9 210 698-959 82-307 (1205)
450 PRK14879 serine/threonine prot 99.6 2E-15 4.3E-20 157.1 12.8 133 705-858 2-142 (211)
451 PRK09605 bifunctional UGMP fam 99.6 2.9E-15 6.3E-20 177.4 15.7 141 694-859 328-476 (535)
452 TIGR03724 arch_bud32 Kae1-asso 99.6 4.6E-15 1E-19 152.7 11.5 130 706-859 1-138 (199)
453 cd05119 RIO RIO kinase family, 99.6 2E-14 4.2E-19 146.5 12.2 135 704-860 2-164 (187)
454 PLN03150 hypothetical protein; 99.5 1.3E-14 2.7E-19 173.5 11.2 118 513-633 419-538 (623)
455 cd05120 APH_ChoK_like Aminogly 99.5 3.8E-14 8.2E-19 139.0 11.1 135 703-859 2-138 (155)
456 PRK01723 3-deoxy-D-manno-octul 99.5 1.6E-13 3.6E-18 143.9 14.5 139 704-859 36-191 (239)
457 KOG0532 Leucine-rich repeat (L 99.5 7.6E-16 1.7E-20 167.1 -3.6 180 412-601 72-251 (722)
458 KOG0590 Checkpoint kinase and 99.5 2E-15 4.3E-20 177.3 -1.5 257 698-998 19-284 (601)
459 KOG0532 Leucine-rich repeat (L 99.4 4.5E-15 9.8E-20 161.1 -5.2 195 390-595 74-271 (722)
460 COG4886 Leucine-rich repeat (L 99.4 5.8E-13 1.3E-17 152.7 6.6 199 395-603 97-296 (394)
461 COG4886 Leucine-rich repeat (L 99.4 9.4E-13 2E-17 151.0 8.3 103 197-304 116-219 (394)
462 TIGR01982 UbiB 2-polyprenylphe 99.3 6.2E-12 1.3E-16 143.6 11.4 142 704-861 122-308 (437)
463 KOG1266 Protein kinase [Signal 99.3 3.1E-12 6.7E-17 130.4 7.0 162 749-917 120-281 (458)
464 KOG0601 Cyclin-dependent kinas 99.3 3.4E-12 7.4E-17 142.5 7.3 203 699-919 114-328 (524)
465 PRK04750 ubiB putative ubiquin 99.3 1.1E-11 2.3E-16 142.7 9.8 151 698-863 119-317 (537)
466 KOG1243 Protein kinase [Genera 99.2 1.6E-10 3.4E-15 130.1 16.3 173 715-915 27-200 (690)
467 cd05146 RIO3_euk RIO kinase fa 99.2 1.5E-10 3.2E-15 115.6 13.9 137 704-860 2-174 (197)
468 COG4248 Uncharacterized protei 99.2 7.2E-10 1.6E-14 117.2 17.0 281 702-1011 14-307 (637)
469 KOG1259 Nischarin, modulator o 99.2 5.4E-12 1.2E-16 126.7 0.2 179 415-602 237-417 (490)
470 cd05151 ChoK Choline Kinase (C 99.2 1.5E-10 3.3E-15 115.8 10.4 130 704-858 3-135 (170)
471 KOG3207 Beta-tubulin folding c 99.1 8.2E-12 1.8E-16 132.4 1.2 208 388-597 118-339 (505)
472 KOG3207 Beta-tubulin folding c 99.1 6E-12 1.3E-16 133.3 -1.0 209 122-333 119-341 (505)
473 KOG0531 Protein phosphatase 1, 99.1 5E-11 1.1E-15 136.7 2.2 107 414-525 161-268 (414)
474 PF14580 LRR_9: Leucine-rich r 99.0 1E-10 2.3E-15 114.3 3.5 129 95-252 14-147 (175)
475 KOG0601 Cyclin-dependent kinas 99.0 1.3E-10 2.8E-15 130.0 3.3 198 695-917 261-465 (524)
476 KOG1909 Ran GTPase-activating 99.0 5.8E-12 1.3E-16 130.1 -7.1 141 294-475 157-310 (382)
477 KOG1909 Ran GTPase-activating 99.0 2.2E-11 4.8E-16 125.9 -2.9 116 346-476 155-283 (382)
478 PF14580 LRR_9: Leucine-rich r 99.0 3.2E-10 6.8E-15 110.9 4.3 107 414-525 18-126 (175)
479 KOG1259 Nischarin, modulator o 99.0 9.6E-11 2.1E-15 117.9 0.5 134 192-332 279-413 (490)
480 KOG0531 Protein phosphatase 1, 99.0 1E-10 2.2E-15 134.1 0.7 251 97-365 69-322 (414)
481 KOG3087 Serine/threonine prote 99.0 5.9E-09 1.3E-13 98.8 11.4 140 703-858 11-164 (229)
482 PF08263 LRRNT_2: Leucine rich 99.0 4.1E-10 8.9E-15 82.5 2.9 39 34-72 2-43 (43)
483 COG3642 Mn2+-dependent serine/ 98.9 6.5E-09 1.4E-13 99.4 11.4 128 705-858 2-139 (204)
484 cd05154 ACAD10_11_like Acyl-Co 98.9 8.3E-09 1.8E-13 108.2 13.0 145 705-859 4-206 (223)
485 KOG0606 Microtubule-associated 98.9 5.7E-10 1.2E-14 130.9 2.2 249 696-959 801-1084(1205)
486 KOG3741 Poly(A) ribonuclease s 98.9 3E-08 6.6E-13 108.2 14.9 178 711-917 288-475 (655)
487 PF01163 RIO1: RIO1 family; I 98.9 1.8E-08 3.9E-13 100.4 11.7 124 714-859 1-155 (188)
488 PRK15123 lipopolysaccharide co 98.8 1.3E-07 2.7E-12 100.4 15.6 145 705-858 28-193 (268)
489 PF13855 LRR_8: Leucine rich r 98.8 3.6E-09 7.8E-14 85.0 2.9 60 537-596 2-61 (61)
490 KOG4658 Apoptotic ATPase [Sign 98.8 5.3E-09 1.2E-13 127.8 5.7 126 100-230 523-651 (889)
491 KOG1859 Leucine-rich repeat pr 98.8 2.5E-10 5.5E-15 127.8 -5.4 202 388-601 81-296 (1096)
492 KOG1859 Leucine-rich repeat pr 98.7 5.5E-10 1.2E-14 125.1 -3.5 179 432-622 102-294 (1096)
493 PF13855 LRR_8: Leucine rich r 98.7 5.2E-09 1.1E-13 84.0 2.8 61 512-572 1-61 (61)
494 KOG4658 Apoptotic ATPase [Sign 98.7 8.6E-09 1.9E-13 126.0 5.6 105 198-304 546-652 (889)
495 COG0478 RIO-like serine/threon 98.7 4.8E-08 1E-12 99.2 9.9 134 701-858 93-250 (304)
496 PRK09902 hypothetical protein; 98.5 1.7E-06 3.7E-11 86.5 13.8 142 707-858 26-178 (216)
497 KOG4579 Leucine-rich repeat (L 98.5 9.5E-09 2.1E-13 92.1 -1.9 87 513-602 78-164 (177)
498 KOG4579 Leucine-rich repeat (L 98.5 7.9E-09 1.7E-13 92.6 -2.7 104 491-598 30-137 (177)
499 PF06293 Kdo: Lipopolysacchari 98.5 1.6E-06 3.4E-11 89.2 13.3 110 740-859 55-170 (206)
500 KOG2137 Protein kinase [Signal 98.4 6.4E-08 1.4E-12 110.0 1.7 140 814-956 106-257 (700)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.3e-113 Score=1097.39 Aligned_cols=917 Identities=31% Similarity=0.508 Sum_probs=758.0
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceeEEEEeCCCCCeeEEEeeccccccccCccccCCCCCCCeeeeccCCc
Q 001782 33 NETDRLALLAIKSQLQDPLGVTSSWNNSMNLCQWTGVTCGHRHQRVTVLDLSNRSIEGILSPYVGNLSFLRFINFANNGF 112 (1013)
Q Consensus 33 ~~~~~~aLl~~k~~~~~~~~~~~sw~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~l 112 (1013)
.+.|+.||++||+++.||.+.+.+|+.+.+||.|.||+|++ .++|+.|||++++++|.+++.+..+++|++|+|++|++
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~ 105 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQL 105 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCCCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCcc
Confidence 56899999999999999988889998888999999999985 46999999999999999999999999999999999999
Q ss_pred cccCCcccC-CcccceEEeccCCccccCCCCccccCCCCceeccccccccCCCCCccccccccccceecccccccccCCC
Q 001782 113 SGEIPGEIG-RLFRLETLILANNSFSGKIPSNLSRCSNLINFHARGNNLVGQIPPDIGYSWLKLEFLSLRDNLLAGQLAP 191 (1013)
Q Consensus 113 ~~~ip~~~~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~ 191 (1013)
+|.+|.++. .+++|++|+|++|+++|.+|. +.+++|++|++++|.+++.+|..+. .+++|++|+|++|.+.+.+|.
T Consensus 106 ~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~ 182 (968)
T PLN00113 106 SGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIG-SFSSLKVLDLGGNVLVGKIPN 182 (968)
T ss_pred CCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHh-cCCCCCEEECccCcccccCCh
Confidence 999998865 999999999999999998886 5689999999999999999998765 789999999999999999999
Q ss_pred CccCCCCcceeeecccccCCCCCCccccccccceeecccccccCCCcchhccCCccceeeccCCccCCCCCCCcCCCCCC
Q 001782 192 SIGNISNLQVLSIGENRLSGRLPDSLGQLRSLYYLSISENAFSGMFPSSIFNISSLESISLLGNRLEGSLPVNIGFSLPN 271 (1013)
Q Consensus 192 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~ 271 (1013)
.++++++|++|+|++|++.+.+|..++++++|++|+|++|++++.+|..++++++|++|+|++|++++.+|..+. .+++
T Consensus 183 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~ 261 (968)
T PLN00113 183 SLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLG-NLKN 261 (968)
T ss_pred hhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHh-CCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999988998876 7999
Q ss_pred CcEEEeeeccccccCCCCCCCCCCCceEEcccCcccccccccccCCCCccccccccCcCCCCCCCChhhhhhcccccccc
Q 001782 272 LENLSVRQNNYTGSLPHSLSNASNLRLLDFSLNHFSGQVKIDFNRLPNLFRLSFSKNNLGTGAIGDLDFIAHLTNCSKLE 351 (1013)
Q Consensus 272 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~ 351 (1013)
|++|++++|++++.+|..+.++++|++|++++|.+.+..|..+..+++|+.|++++|.+... .+..+..+++|+
T Consensus 262 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~------~~~~~~~l~~L~ 335 (968)
T PLN00113 262 LQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGK------IPVALTSLPRLQ 335 (968)
T ss_pred CCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCc------CChhHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999988652 234567788999
Q ss_pred cccccccccCCccchhhhcchhhHHHHh--cc---chhHHhhcccccceeecccccccCCcccccCCCCCCCEEEccCCc
Q 001782 352 ALGLDTNIFGGVLPLSIANLSSTIILFS--MG---LNQIYVKNLVNLNGFGLEYNQLTGPIPHAIGELRNLQVLDLHHNN 426 (1013)
Q Consensus 352 ~L~l~~n~~~~~~p~~~~~l~~~~~~~~--~~---~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 426 (1013)
.|+++.|.+.+.+|..++.+.++..+.- .. .....+..+.+|+.|++++|.+.+.+|..++.+++|+.|++++|+
T Consensus 336 ~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~ 415 (968)
T PLN00113 336 VLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNS 415 (968)
T ss_pred EEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCE
Confidence 9999999999999988877655433311 11 112345677889999999999999999999999999999999999
Q ss_pred cCccCCccccccCccCEEEcCCCcccCCCCcccccCcccceeecccccccccCCchhhcccchhhhhccCCCeecccCCc
Q 001782 427 LDGHIPESLGNLTILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSILLDLSGNLLTGSIPA 506 (1013)
Q Consensus 427 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~Ls~N~l~~~~~~ 506 (1013)
+++.+|..|..+++|+.|++++|++++.+|..+..+++|+.|++++|++.+.+|..+. .+.|+.|++++|++++.+|.
T Consensus 416 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~--~~~L~~L~ls~n~l~~~~~~ 493 (968)
T PLN00113 416 FSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG--SKRLENLDLSRNQFSGAVPR 493 (968)
T ss_pred eeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc--cccceEEECcCCccCCccCh
Confidence 9999999999999999999999999999999999999999999999999988887653 57899999999999999999
Q ss_pred cccCcCCCcEEEccCCCCCCCCccccccccccccccccccccccccCccccccCCCCeEecccccccccccccccccccc
Q 001782 507 EVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRNNLSGQIPEFLENLSFL 586 (1013)
Q Consensus 507 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 586 (1013)
.+.++++|+.|+|++|++++.+|..+..+++|++|+|++|.+++.+|..+..+++|+.|||++|++++.+|..+.++++|
T Consensus 494 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 573 (968)
T PLN00113 494 KLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESL 573 (968)
T ss_pred hhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecCCccCCCCCCCCCccCCCcceeeeCCcCCCCCCCCCCCCcccCCCCCcceeEEEEeehhhHHHHHHHHHHHHHHh
Q 001782 587 EYLNLSYNHLEGEVPRRGVFSNKTRFYFTGNKRLCGGLDELHLPVCHSAGPRKTRIALLKVVVPVTVILTIIVACLIVLY 666 (1013)
Q Consensus 587 ~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vi~~~~v~~~~~~~ 666 (1013)
+.|++++|+++|.+|..+.+..+....+.||+.+||+......++|..... ...+ ...+++.+++++.++++++++++
T Consensus 574 ~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 651 (968)
T PLN00113 574 VQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRK-TPSW-WFYITCTLGAFLVLALVAFGFVF 651 (968)
T ss_pred CEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccc-ccee-eeehhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999765444567754222 1122 22222222222222222222233
Q ss_pred hhhccc-ccccchh--hhhhhc-C--CCcchhhhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccch
Q 001782 667 TRRRKH-KHKSSSM--LLMEQQ-F--PMVSYADLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGAT 740 (1013)
Q Consensus 667 ~rrr~~-~~~~~~~--~~~~~~-~--~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~ 740 (1013)
+|+|+. +.+.... ...+.. + ..............|...++||+|+||.||+|++..++..||||+++....
T Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--- 728 (968)
T PLN00113 652 IRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--- 728 (968)
T ss_pred HHhhhcccccccccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---
Confidence 332221 1111100 000000 0 000111222334567888999999999999999988999999998863322
Q ss_pred hHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHH
Q 001782 741 KSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAI 820 (1013)
Q Consensus 741 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L 820 (1013)
....|++++++++||||++++|+|.. ++..++||||+++|+|.++++ .++|.++.+|+.|+|+|+
T Consensus 729 -~~~~~~~~l~~l~HpnIv~~~~~~~~-----~~~~~lv~Ey~~~g~L~~~l~---------~l~~~~~~~i~~~ia~~L 793 (968)
T PLN00113 729 -IPSSEIADMGKLQHPNIVKLIGLCRS-----EKGAYLIHEYIEGKNLSEVLR---------NLSWERRRKIAIGIAKAL 793 (968)
T ss_pred -ccHHHHHHHhhCCCCCcceEEEEEEc-----CCCCEEEEeCCCCCcHHHHHh---------cCCHHHHHHHHHHHHHHH
Confidence 22356889999999999999999753 366899999999999999995 368899999999999999
Q ss_pred HHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccc
Q 001782 821 EYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGD 900 (1013)
Q Consensus 821 ~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 900 (1013)
+|||..+.++|+||||||+||+++.++.+++. ||.+..... .....+|+.|+|||++.+..++.++|
T Consensus 794 ~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~sD 860 (968)
T PLN00113 794 RFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT------------DTKCFISSAYVAPETRETKDITEKSD 860 (968)
T ss_pred HHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc------------CCCccccccccCcccccCCCCCcccc
Confidence 99996655699999999999999999888875 665442211 12236789999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCCh-hHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHH
Q 001782 901 VYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPE-KVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRI 979 (1013)
Q Consensus 901 IwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l 979 (1013)
||||||++|||++|+.||+...........+.+..... ....++++.+.... ....++..++.++
T Consensus 861 v~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~l 926 (968)
T PLN00113 861 IYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV--------------SVNQNEIVEVMNL 926 (968)
T ss_pred hhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC--------------CccHHHHHHHHHH
Confidence 99999999999999999975444444445554433322 22333332221110 1112345578899
Q ss_pred hhhcccCCCCCCCCHHHHHHHHHHhhhhhh
Q 001782 980 GVLCSMESPSERIQMTDVVAKLCSARKIFL 1009 (1013)
Q Consensus 980 ~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 1009 (1013)
+.+||+.||++|||++||+++|+++.+...
T Consensus 927 ~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~ 956 (968)
T PLN00113 927 ALHCTATDPTARPCANDVLKTLESASRSSS 956 (968)
T ss_pred HHhhCcCCchhCcCHHHHHHHHHHhhcccc
Confidence 999999999999999999999999877543
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.1e-59 Score=597.01 Aligned_cols=513 Identities=34% Similarity=0.495 Sum_probs=468.5
Q ss_pred CCCCeeeeccCCccccCCcccCCcccceEEeccCCccccCCCCccc-cCCCCceeccccccccCCCCCccccccccccce
Q 001782 100 SFLRFINFANNGFSGEIPGEIGRLFRLETLILANNSFSGKIPSNLS-RCSNLINFHARGNNLVGQIPPDIGYSWLKLEFL 178 (1013)
Q Consensus 100 ~~L~~L~l~~n~l~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L 178 (1013)
.+++.|+|++|+++|.+|.+|..+++|++|+|++|+++|.+|..+. .+++|++|++++|+++|.+|.. .+++|++|
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~---~l~~L~~L 145 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRG---SIPNLETL 145 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCcc---ccCCCCEE
Confidence 4689999999999999999999999999999999999999998876 9999999999999999999974 57899999
Q ss_pred ecccccccccCCCCccCCCCcceeeecccccCCCCCCccccccccceeecccccccCCCcchhccCCccceeeccCCccC
Q 001782 179 SLRDNLLAGQLAPSIGNISNLQVLSIGENRLSGRLPDSLGQLRSLYYLSISENAFSGMFPSSIFNISSLESISLLGNRLE 258 (1013)
Q Consensus 179 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 258 (1013)
+|++|.+++.+|..++++++|++|+|++|.+.+.+|..|+++++|++|+|++|++++.+|..++++++|++|+|++|+++
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCCCcEEEeeeccccccCCCCCCCCCCCceEEcccCcccccccccccCCCCccccccccCcCCCCCCCCh
Q 001782 259 GSLPVNIGFSLPNLENLSVRQNNYTGSLPHSLSNASNLRLLDFSLNHFSGQVKIDFNRLPNLFRLSFSKNNLGTGAIGDL 338 (1013)
Q Consensus 259 ~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 338 (1013)
+.+|..+. .+++|++|++++|++++.+|..++++++|++|++++|++.+..|..+..+++|+.|++++|.+...
T Consensus 226 ~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~----- 299 (968)
T PLN00113 226 GEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGE----- 299 (968)
T ss_pred CcCChhHh-cCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccC-----
Confidence 99998887 799999999999999999999999999999999999999999999999999999999999998642
Q ss_pred hhhhhcccccccccccccccccCCccchhhhcchhhHHHHh--ccc---hhHHhhcccccceeecccccccCCcccccCC
Q 001782 339 DFIAHLTNCSKLEALGLDTNIFGGVLPLSIANLSSTIILFS--MGL---NQIYVKNLVNLNGFGLEYNQLTGPIPHAIGE 413 (1013)
Q Consensus 339 ~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~--~~~---~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 413 (1013)
++..+.++++|+.|+++.|.+.+..|..+..++++..+.- ..+ ....+..+++|+.|+|++|++++.+|..+..
T Consensus 300 -~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~ 378 (968)
T PLN00113 300 -IPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCS 378 (968)
T ss_pred -CChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhC
Confidence 3455678899999999999999999988877665443321 111 1235677889999999999999999999999
Q ss_pred CCCCCEEEccCCccCccCCccccccCccCEEEcCCCcccCCCCcccccCcccceeecccccccccCCchhhcccchhhhh
Q 001782 414 LRNLQVLDLHHNNLDGHIPESLGNLTILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSILL 493 (1013)
Q Consensus 414 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L 493 (1013)
+++|+.|++++|++.+.+|..+..+++|+.|++++|++++.+|..|.++++|+.|++++|++++.+|..+.. ++.|+.|
T Consensus 379 ~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L 457 (968)
T PLN00113 379 SGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWD-MPSLQML 457 (968)
T ss_pred cCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhcc-CCCCcEE
Confidence 999999999999999999999999999999999999999999999999999999999999999888877665 8889999
Q ss_pred ccCCCeecccCCccccCcCCCcEEEccCCCCCCCCccccccccccccccccccccccccCccccccCCCCeEeccccccc
Q 001782 494 DLSGNLLTGSIPAEVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRNNLS 573 (1013)
Q Consensus 494 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 573 (1013)
+|++|++.+.+|..+ ..++|+.|+|++|++++.+|..+..+++|++|+|++|++++.+|..+..+++|++|+|++|.++
T Consensus 458 ~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 536 (968)
T PLN00113 458 SLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLS 536 (968)
T ss_pred ECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCccc
Confidence 999999999888766 4589999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccceeecCCccCCCCCCCC-CccCCCcceeeeCCcCCCCCC
Q 001782 574 GQIPEFLENLSFLEYLNLSYNHLEGEVPRR-GVFSNKTRFYFTGNKRLCGGL 624 (1013)
Q Consensus 574 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~c~~~ 624 (1013)
+.+|..|.++++|+.|+|++|++++.+|.. ..+..+..+.+.+|+..+.-|
T Consensus 537 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 537 GQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred ccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 999999999999999999999999988874 567788999999999766433
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-45 Score=401.21 Aligned_cols=291 Identities=40% Similarity=0.658 Sum_probs=239.1
Q ss_pred cCCCcchhhhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEE
Q 001782 685 QFPMVSYADLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITV 764 (1013)
Q Consensus 685 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 764 (1013)
....|++.++..+|++|....+||+|+||.||+|.... +..||||++........++|.+|++++.+++|||+++++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 56779999999999999999999999999999999974 48899998875443214569999999999999999999999
Q ss_pred eecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEec
Q 001782 765 CSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLD 844 (1013)
Q Consensus 765 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~ 844 (1013)
|.+. ++..++|+|||++|+|.+++...... .++|.++++||.++|+||+|||+.+.+.||||||||+|||+|
T Consensus 140 C~e~----~~~~~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD 211 (361)
T KOG1187|consen 140 CLEG----GEHRLLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD 211 (361)
T ss_pred EecC----CceEEEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC
Confidence 9643 12689999999999999999886431 789999999999999999999999888999999999999999
Q ss_pred CCCceEEccccccccCCCCCCCccccCCCCCccc-ccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcC-
Q 001782 845 HDMVAHVGDFGLARFLPPCSPATILETPSSSTGI-KGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMF- 922 (1013)
Q Consensus 845 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~- 922 (1013)
+++++||+|||+|+..+... ...... .||.+|+|||+...+..+.|+||||||+++.|+++|+.|.+...
T Consensus 212 ~~~~aKlsDFGLa~~~~~~~--------~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~ 283 (361)
T KOG1187|consen 212 EDFNAKLSDFGLAKLGPEGD--------TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRP 283 (361)
T ss_pred CCCCEEccCccCcccCCccc--------cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCC
Confidence 99999999999996543210 001111 79999999999999999999999999999999999999887643
Q ss_pred CCCccHHHHHHhhCCh-hHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 923 NDGLTLHEFAKMALPE-KVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 923 ~~~~~~~~~~~~~~~~-~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
........|....... .+.+++|+.+..+.. . ..++..++.+++.+|++.+|++||+|.||+++|
T Consensus 284 ~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~-------------~-~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L 349 (361)
T KOG1187|consen 284 RGELSLVEWAKPLLEEGKLREIVDPRLKEGEY-------------P-DEKEVKKLAELALRCLRPDPKERPTMSQVVKEL 349 (361)
T ss_pred cccccHHHHHHHHHHCcchhheeCCCccCCCC-------------C-hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence 2333466666555443 577888876642110 0 014466789999999999999999999999999
Q ss_pred HHhhh
Q 001782 1002 CSARK 1006 (1013)
Q Consensus 1002 ~~~~~ 1006 (1013)
+.+..
T Consensus 350 ~~~~~ 354 (361)
T KOG1187|consen 350 EGILS 354 (361)
T ss_pred Hhhcc
Confidence 76654
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-44 Score=373.66 Aligned_cols=253 Identities=25% Similarity=0.342 Sum_probs=211.1
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc-eEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD-FKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~-~~~ 777 (1013)
+.+..+.||+|..|+||+++++.+++.+|+|++....+ ...+++.+|+++++..+||+||.+||+|.. .. ...
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~-----~~~~is 154 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS-----NGEEIS 154 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe-----CCceEE
Confidence 44556899999999999999999999999999964433 345789999999999999999999999753 24 699
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHH-HCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||++|+|++++... +++++....+|+.++++||.|||+ + +||||||||+|||+...|.|||||||.
T Consensus 155 I~mEYMDgGSLd~~~k~~------g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGV 225 (364)
T KOG0581|consen 155 ICMEYMDGGSLDDILKRV------GRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGV 225 (364)
T ss_pred eehhhcCCCCHHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccc
Confidence 999999999999999876 679999999999999999999996 6 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
++.+... ....++||..|||||.+.+..|+.++||||||++++|+++|+.||......
T Consensus 226 S~~lvnS----------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~------------ 283 (364)
T KOG0581|consen 226 SGILVNS----------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP------------ 283 (364)
T ss_pred cHHhhhh----------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC------------
Confidence 9865322 346788999999999999999999999999999999999999999763111
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
+....+++.......|..-|. ..+.+++..++..|++.||.+|||+.|+++.
T Consensus 284 ~~~~~~Ll~~Iv~~ppP~lP~------------~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 284 YLDIFELLCAIVDEPPPRLPE------------GEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCHHHHHHHHhcCCCCCCCc------------ccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 123344444444333322111 1356778999999999999999999999763
No 5
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-45 Score=377.55 Aligned_cols=267 Identities=28% Similarity=0.467 Sum_probs=212.8
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec--cccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK--QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
..++|...+.||+|+||+||+|+++.++..||||.+... .....+.+..|+++|+.++|||||++++++ +.++
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~-----~~~~ 82 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCI-----EDDD 82 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEE-----ecCC
Confidence 356899999999999999999999999999999999765 344456789999999999999999999995 4557
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC------Cc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD------MV 848 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------~~ 848 (1013)
+.|+|||||.||+|.+|++.. +.+++..++.++.|+|.|+++||++ +||||||||+|||++.. -.
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~------~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~ 153 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRR------GRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPV 153 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCce
Confidence 999999999999999999987 5799999999999999999999999 99999999999999865 46
Q ss_pred eEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccH
Q 001782 849 AHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTL 928 (1013)
Q Consensus 849 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~ 928 (1013)
+||+|||+|+.+.+.. .....+|++.|||||++...+|+.|+|+||+|+++|++++|+.||+.....+...
T Consensus 154 LKIADFGfAR~L~~~~---------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~ 224 (429)
T KOG0595|consen 154 LKIADFGFARFLQPGS---------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLL 224 (429)
T ss_pred EEecccchhhhCCchh---------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHH
Confidence 8999999999875432 2456789999999999999999999999999999999999999998532221111
Q ss_pred --------HHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 929 --------HEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 929 --------~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
........+....+++-+.+..++.+|... ...+...++..+|.+|+.+.++-..
T Consensus 225 ~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~-----------------~~~~~~~~l~~~p~~~~~~~~~~~~ 287 (429)
T KOG0595|consen 225 YIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISF-----------------EDFFDHPFLAANPQDRADAFELESR 287 (429)
T ss_pred HHhccccccCchhhhccCchhhhhhHHHhcCccccCch-----------------HHhhhhhhcccCcccccCccccccc
Confidence 000111122233455555555555444321 2345567788888888877766544
Q ss_pred HHH
Q 001782 1001 LCS 1003 (1013)
Q Consensus 1001 L~~ 1003 (1013)
...
T Consensus 288 ~~~ 290 (429)
T KOG0595|consen 288 TDQ 290 (429)
T ss_pred ccc
Confidence 443
No 6
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-43 Score=388.28 Aligned_cols=263 Identities=31% Similarity=0.473 Sum_probs=211.7
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccc--hhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGA--TKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
...+.+.+|+|+||+||+|.+++. ..||||++....... .++|.+|+.+|.+++|||||+++|+|... ....+
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~-~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~----~~~~~ 116 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGT-DVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP----PGSLC 116 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCc-eeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC----CCceE
Confidence 445556799999999999999733 239999997544322 45899999999999999999999998643 12689
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-eeecCCCCCceEecCCC-ceEEcccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPP-IVHGDLKPSNVLLDHDM-VAHVGDFG 855 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~-ivH~Dlkp~NIll~~~~-~~kl~DFG 855 (1013)
+||||+++|+|.+++.... ...+++..+++|+.|||+||.|||++ + ||||||||+|||++.++ ++||+|||
T Consensus 117 iVtEy~~~GsL~~~l~~~~----~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFG 189 (362)
T KOG0192|consen 117 IVTEYMPGGSLSVLLHKKR----KRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFG 189 (362)
T ss_pred EEEEeCCCCcHHHHHhhcc----cCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCc
Confidence 9999999999999998741 15899999999999999999999999 7 99999999999999998 99999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccC--CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM--GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
+++...... .......||+.|||||++. ...|+.|+||||||+++|||+||+.||...... .....
T Consensus 190 lsr~~~~~~--------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-~~~~~--- 257 (362)
T KOG0192|consen 190 LSREKVISK--------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-QVASA--- 257 (362)
T ss_pred cceeecccc--------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-HHHHH---
Confidence 998653211 2233468999999999999 569999999999999999999999999875331 11111
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhhhhhcc
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARKIFLSN 1011 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 1011 (1013)
++.. ..||... ..++..+..++.+||+.||.+||++.|++..|+.+...+...
T Consensus 258 ---------v~~~------~~Rp~~p----------~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~ 310 (362)
T KOG0192|consen 258 ---------VVVG------GLRPPIP----------KECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSA 310 (362)
T ss_pred ---------HHhc------CCCCCCC----------ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhccc
Confidence 1100 0111111 125677899999999999999999999999999998876643
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.2e-44 Score=388.42 Aligned_cols=248 Identities=25% Similarity=0.378 Sum_probs=211.6
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec---cccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK---QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
.+|...+.||+|||+.||++++..+|..||+|++... .....+.+.+|+++.+.++|||||+++++ |++.++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~-----FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHF-----FEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeE-----eecCCc
Confidence 6899999999999999999999889999999999742 34456778999999999999999999999 567799
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.|+|.|.|+.++|.++++.. +.+++.+++.+..||+.|+.|||++ +|+|||||..|++++++.++||+|||
T Consensus 93 VYivLELC~~~sL~el~Krr------k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRR------KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred eEEEEEecCCccHHHHHHhc------CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccc
Confidence 99999999999999999965 6899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
+|..+.. ...+....+|||.|.|||++....++..+||||+|||+|.|+.|++||+..
T Consensus 164 LAt~le~--------~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-------------- 221 (592)
T KOG0575|consen 164 LATQLEY--------DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-------------- 221 (592)
T ss_pred eeeeecC--------cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc--------------
Confidence 9987643 223466789999999999999999999999999999999999999999752
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.+.+..++....++ ..| ........++|.++|++||.+|||+++|+.
T Consensus 222 ---~vkety~~Ik~~~Y-~~P-------------~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 222 ---TVKETYNKIKLNEY-SMP-------------SHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ---hHHHHHHHHHhcCc-ccc-------------cccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 12222222221111 011 122344678999999999999999999985
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-44 Score=371.09 Aligned_cols=255 Identities=24% Similarity=0.358 Sum_probs=206.8
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-------cchhHHHHHHHHHhcCCCCccceEEEEeecCC
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-------GATKSFVAECEALRNIRHRNLIKIITVCSSID 769 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 769 (1013)
..+.|.+.+.||+|+||.|-+|..+.+++.||||+++.... .......+|+++|++++||+||+++++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~----- 244 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDF----- 244 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeee-----
Confidence 35678899999999999999999999999999999973321 122346799999999999999999999
Q ss_pred ccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC---
Q 001782 770 FEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD--- 846 (1013)
Q Consensus 770 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--- 846 (1013)
++.++..|+||||++||+|.+.+-.+ +.+.+.....++.|++.|+.|||++ ||+||||||+|||+..+
T Consensus 245 f~~~ds~YmVlE~v~GGeLfd~vv~n------k~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~ 315 (475)
T KOG0615|consen 245 FEVPDSSYMVLEYVEGGELFDKVVAN------KYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAED 315 (475)
T ss_pred eecCCceEEEEEEecCccHHHHHHhc------cccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcc
Confidence 45668889999999999999999876 5677888899999999999999999 99999999999999765
Q ss_pred CceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCC---CcccchHHHHHHHHHHHhCCCCCCCcCC
Q 001782 847 MVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDM---SATGDVYSFGILLLEMFTRRRPTDNMFN 923 (1013)
Q Consensus 847 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DIwSlG~il~ell~G~~pf~~~~~ 923 (1013)
..+||+|||+|+..+. .......+||+.|.|||++.+..+ ..++||||+||++|-+++|.+||.....
T Consensus 316 ~llKItDFGlAK~~g~---------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~ 386 (475)
T KOG0615|consen 316 CLLKITDFGLAKVSGE---------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYT 386 (475)
T ss_pred eEEEecccchhhcccc---------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccC
Confidence 7899999999997642 233667899999999999987643 3478999999999999999999987533
Q ss_pred CCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 924 DGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
+.....++. ....... ...+.+..++..+++.+||..||++|||+.|+++.
T Consensus 387 ~~sl~eQI~------------~G~y~f~--------------p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 387 DPSLKEQIL------------KGRYAFG--------------PLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred CccHHHHHh------------cCccccc--------------ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 321111111 1111111 12334556678899999999999999999999763
No 9
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.9e-47 Score=389.74 Aligned_cols=482 Identities=29% Similarity=0.432 Sum_probs=383.4
Q ss_pred eeEEEeeccccccccCccccCCCCCCCeeeeccCCccccCCcccCCcccceEEeccCCccccCCCCccccCCCCceeccc
Q 001782 77 RVTVLDLSNRSIEGILSPYVGNLSFLRFINFANNGFSGEIPGEIGRLFRLETLILANNSFSGKIPSNLSRCSNLINFHAR 156 (1013)
Q Consensus 77 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 156 (1013)
....+++++|.++ .+.+.+.+|..|..|++++|+++ ++|+++|.+..+..|+.++|+++ .+|++++.+.+|++|+.+
T Consensus 46 ~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 4677889999887 46678889999999999999999 89999999999999999999999 899999999999999999
Q ss_pred cccccCCCCCccccccccccceecccccccccCCCCccCCCCcceeeecccccCCCCCCccccccccceeecccccccCC
Q 001782 157 GNNLVGQIPPDIGYSWLKLEFLSLRDNLLAGQLAPSIGNISNLQVLSIGENRLSGRLPDSLGQLRSLYYLSISENAFSGM 236 (1013)
Q Consensus 157 ~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 236 (1013)
.|.+. ++|++++ .+..|+.|+..+|+++ ..|+.++++.+|..|++.+|++.. .|...-.++.|++||+-.|-++ .
T Consensus 123 ~n~~~-el~~~i~-~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~-l~~~~i~m~~L~~ld~~~N~L~-t 197 (565)
T KOG0472|consen 123 SNELK-ELPDSIG-RLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKA-LPENHIAMKRLKHLDCNSNLLE-T 197 (565)
T ss_pred cccee-ecCchHH-HHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhh-CCHHHHHHHHHHhcccchhhhh-c
Confidence 99998 8888887 6778999999999998 778889999999999999999984 5544555999999999999887 7
Q ss_pred CcchhccCCccceeeccCCccCCCCCCCcCCCCCCCcEEEeeeccccccCCCCC-CCCCCCceEEcccCccccccccccc
Q 001782 237 FPSSIFNISSLESISLLGNRLEGSLPVNIGFSLPNLENLSVRQNNYTGSLPHSL-SNASNLRLLDFSLNHFSGQVKIDFN 315 (1013)
Q Consensus 237 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~ 315 (1013)
+|..++.+.+|+-|+|.+|+|. .+| .+. +...|++|+++.|+|. .+|.+. .++.+|.+|||..|+++ ..|+..+
T Consensus 198 lP~~lg~l~~L~~LyL~~Nki~-~lP-ef~-gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~c 272 (565)
T KOG0472|consen 198 LPPELGGLESLELLYLRRNKIR-FLP-EFP-GCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEIC 272 (565)
T ss_pred CChhhcchhhhHHHHhhhcccc-cCC-CCC-ccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHH
Confidence 8999999999999999999998 888 444 5788999999999998 666654 58999999999999998 5677888
Q ss_pred CCCCccccccccCcCCCCCCCChhhhhhcccccccccccccccccCCccchhhhcchhhHHHHhccchhHHhhcccccce
Q 001782 316 RLPNLFRLSFSKNNLGTGAIGDLDFIAHLTNCSKLEALGLDTNIFGGVLPLSIANLSSTIILFSMGLNQIYVKNLVNLNG 395 (1013)
Q Consensus 316 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~L~~ 395 (1013)
.+.+|.+||+|+|.|+.. +..++++ .|+.|.+.+|.+..+--+-+. ..+..++ .++.+ ..+.
T Consensus 273 lLrsL~rLDlSNN~is~L-------p~sLgnl-hL~~L~leGNPlrTiRr~ii~-~gT~~vL-------KyLrs--~~~~ 334 (565)
T KOG0472|consen 273 LLRSLERLDLSNNDISSL-------PYSLGNL-HLKFLALEGNPLRTIRREIIS-KGTQEVL-------KYLRS--KIKD 334 (565)
T ss_pred HhhhhhhhcccCCccccC-------Ccccccc-eeeehhhcCCchHHHHHHHHc-ccHHHHH-------HHHHH--hhcc
Confidence 999999999999998874 3467788 889999999877533211111 1111000 01111 0000
Q ss_pred eeccccc---------ccCCcccccCCCCCCCEEEccCCccCccCCccccccCc---cCEEEcCCCcccCCCCcccccCc
Q 001782 396 FGLEYNQ---------LTGPIPHAIGELRNLQVLDLHHNNLDGHIPESLGNLTI---LNSLDLGFNKLRGHVPSSLGNCQ 463 (1013)
Q Consensus 396 L~L~~n~---------l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p~~~~~l~ 463 (1013)
=.++.-. ..+.. .....+.+.+.|+++.-+++ .+|+....... +...+++.|++. ++|..+..+.
T Consensus 335 dglS~se~~~e~~~t~~~~~~-~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lk 411 (565)
T KOG0472|consen 335 DGLSQSEGGTETAMTLPSESF-PDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELK 411 (565)
T ss_pred CCCCCCcccccccCCCCCCcc-cchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHH
Confidence 0111110 11111 12334567889999999999 55655444333 888999999998 7898888887
Q ss_pred cc-ceeecccccccccCCchhhcccchhhhhccCCCeecccCCccccCcCCCcEEEccCCCCCCCCcccccccccccccc
Q 001782 464 NL-MLLSVSNNKLTGALPPQILGIVTLSILLDLSGNLLTGSIPAEVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLY 542 (1013)
Q Consensus 464 ~L-~~L~L~~N~l~~~~p~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 542 (1013)
.+ +.+.+++|.++ .+|..+.. ++.++.|+|++|-+. .+|.+++.+..|+.||+|.|+|. .+|..+..+..|+.+-
T Consensus 412 elvT~l~lsnn~is-fv~~~l~~-l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtll 487 (565)
T KOG0472|consen 412 ELVTDLVLSNNKIS-FVPLELSQ-LQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLL 487 (565)
T ss_pred HHHHHHHhhcCccc-cchHHHHh-hhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHH
Confidence 65 45566666665 66665555 888999999999988 68999999999999999999998 8898888888888888
Q ss_pred ccccccccccCccccccCCCCeEeccccccccccccccccccccceeecCCccCC
Q 001782 543 MEGNSLTGSIPLALKTLKSIKELDLSRNNLSGQIPEFLENLSFLEYLNLSYNHLE 597 (1013)
Q Consensus 543 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 597 (1013)
.++|++..+.|+.+.++.+|..|||.+|.|. .+|..+++|++|++|++++|++.
T Consensus 488 as~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 488 ASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 8889999777777999999999999999998 78889999999999999999998
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-44 Score=353.15 Aligned_cols=265 Identities=23% Similarity=0.355 Sum_probs=210.5
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
...+|++.++||+|.||+||++....++..||.|.+.... ..+.+....|+.+|++++|||||+++++-. .++..
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f---~~~~e 93 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF---IEDNE 93 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh---hccch
Confidence 3457889999999999999999999999999999987443 234566899999999999999999998532 23344
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeecCCCCCceEecCCCceEEcc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHP-PIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
..++|||+|+.|+|.++++..+.+ .+.+++..+|+++.|++.||.++|+..+. -|+||||||.||+++.+|.+||+|
T Consensus 94 vlnivmE~c~~GDLsqmIk~~K~q--kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGD 171 (375)
T KOG0591|consen 94 VLNIVMELCDAGDLSQMIKHFKKQ--KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGD 171 (375)
T ss_pred hhHHHHHhhcccCHHHHHHHHHhc--cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeecc
Confidence 489999999999999999876543 35799999999999999999999994332 288999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||+++++.... ......+|||.||+||.+.+.+|+.++||||+||++|||+.-++||...
T Consensus 172 fGL~r~l~s~~--------tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------------ 231 (375)
T KOG0591|consen 172 FGLGRFLSSKT--------TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------------ 231 (375)
T ss_pred chhHhHhcchh--------HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------------
Confidence 99999875322 2245688999999999999999999999999999999999999999763
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
...++-.+.-..|... .+ .+-....+..++..|+..||+.||+...++..+..
T Consensus 232 -----n~~~L~~KI~qgd~~~-----------~p-~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 232 -----NLLSLCKKIEQGDYPP-----------LP-DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -----cHHHHHHHHHcCCCCC-----------Cc-HHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 1111111111111100 00 02234568889999999999999997666655544
No 11
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-43 Score=379.14 Aligned_cols=263 Identities=31% Similarity=0.486 Sum_probs=213.8
Q ss_pred hhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 695 SKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 695 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
......+...+.||+|.||.||.|.+.. ...||+|.++... ...+.|.+|+++|++++|++||+++|+|... +
T Consensus 202 ei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~-----~ 274 (468)
T KOG0197|consen 202 EIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ-----E 274 (468)
T ss_pred eecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecC-----C
Confidence 3344456677899999999999999974 3479999998553 3347788999999999999999999998632 4
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..+||||||+.|+|.+|++.... ..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+||
T Consensus 275 piyIVtE~m~~GsLl~yLr~~~~----~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDF 347 (468)
T KOG0197|consen 275 PIYIVTEYMPKGSLLDYLRTREG----GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDF 347 (468)
T ss_pred ceEEEEEecccCcHHHHhhhcCC----CccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEccc
Confidence 68999999999999999998322 5789999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~ 933 (1013)
|+|+...++. ... .....-+..|.|||.+..+.++.|+|||||||++|||+| |+.||..+.+.
T Consensus 348 GLAr~~~d~~-Y~~------~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~--------- 411 (468)
T KOG0197|consen 348 GLARLIGDDE-YTA------SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE--------- 411 (468)
T ss_pred ccccccCCCc-eee------cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH---------
Confidence 9999443221 111 223334689999999999999999999999999999999 99998775322
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARKIF 1008 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1008 (1013)
++.+.+++. .+++.+..||..+.++|..||+.+|++|||++.+...++++....
T Consensus 412 -----ev~~~le~G----------------yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 412 -----EVLELLERG----------------YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred -----HHHHHHhcc----------------CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 112222211 122233567889999999999999999999999999998876543
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1e-42 Score=345.43 Aligned_cols=278 Identities=19% Similarity=0.266 Sum_probs=209.4
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
+.|+...++|+|+||+||+++++.+|+.||||++....+ ...+-..+|++++++++|||+|.++++| ......
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF-----rrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF-----RRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH-----Hhccee
Confidence 468888999999999999999999999999999974433 2234578999999999999999999995 455889
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++|+|||+ .++.+-++... ..++...+.+++.|++.|+.|+|++ ++|||||||+|||++.+|.+||||||+
T Consensus 77 hLVFE~~d-hTvL~eLe~~p-----~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 77 HLVFEYCD-HTVLHELERYP-----NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred EEEeeecc-hHHHHHHHhcc-----CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchh
Confidence 99999999 56666666543 4789999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH-Hh
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA-KM 934 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~-~~ 934 (1013)
|+.+.. .....+.++.|.+|+|||.+.+ .+|+..+||||+||++.||++|.+.|.+..+-+..+.... -.
T Consensus 148 AR~L~~--------pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG 219 (396)
T KOG0593|consen 148 ARTLSA--------PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLG 219 (396)
T ss_pred hHhhcC--------CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHc
Confidence 997752 1223556788999999999888 6899999999999999999999999987543322221111 11
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
...+....++..--.+. .-|.+..+...+-..+......-+.+++..|++.||++|++.+|++.
T Consensus 220 ~L~prhq~iF~~N~~F~-Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 220 NLIPRHQSIFSSNPFFH-GVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred ccCHHHHHHhccCCcee-eeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 22333333322100000 00111111111111122233446889999999999999999999874
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-42 Score=353.03 Aligned_cols=238 Identities=29% Similarity=0.426 Sum_probs=204.7
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec---cccchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK---QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
..++|++.++||+|+||.||.++.+.+++.+|+|+++.. ...+.+....|..++.+++||.||+++-. |+++
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys-----FQt~ 97 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS-----FQTE 97 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe-----cccC
Confidence 356899999999999999999999999999999999743 23445678899999999999999999987 6777
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
+..|+|+||+.||.|...+++. +.+++..+..++..|+.||.|||++ ||||||+||+|||+|++|+++|+|
T Consensus 98 ~kLylVld~~~GGeLf~hL~~e------g~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtD 168 (357)
T KOG0598|consen 98 EKLYLVLDYLNGGELFYHLQRE------GRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTD 168 (357)
T ss_pred CeEEEEEeccCCccHHHHHHhc------CCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEec
Confidence 9999999999999999999876 6899999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||+++..- ........++||+.|||||++.+..|+.++|.||+|+++|||++|.+||...... .....+.+
T Consensus 169 FgL~k~~~--------~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~-~~~~~I~~ 239 (357)
T KOG0598|consen 169 FGLCKEDL--------KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK-KMYDKILK 239 (357)
T ss_pred cccchhcc--------cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH-HHHHHHhc
Confidence 99998432 2233455689999999999999999999999999999999999999999864222 22222222
Q ss_pred hh-------CChhHHHhhhhhhccchhhhhc
Q 001782 934 MA-------LPEKVMEIVDPLLLLDLEARAS 957 (1013)
Q Consensus 934 ~~-------~~~~~~~~i~~~l~~~~~~R~~ 957 (1013)
.. .+.+.++++.+++..+|.+|..
T Consensus 240 ~k~~~~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 240 GKLPLPPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred CcCCCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence 22 4566888889999999988875
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-42 Score=368.27 Aligned_cols=260 Identities=28% Similarity=0.423 Sum_probs=211.8
Q ss_pred hhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec---cccchhHHHHHHHHHhcC-CCCccceEEEEeecCCc
Q 001782 695 SKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK---QRGATKSFVAECEALRNI-RHRNLIKIITVCSSIDF 770 (1013)
Q Consensus 695 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 770 (1013)
++...+|..++.||+|+|++|++|+...+++.||||++... .....+.+..|-++|.++ .||.|++++.. |
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T-----F 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT-----F 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE-----e
Confidence 44567899999999999999999999999999999998632 334456678899999999 89999999987 5
Q ss_pred cccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceE
Q 001782 771 EEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAH 850 (1013)
Q Consensus 771 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 850 (1013)
+++...|+|+||+++|+|.++|++. +.+++..++.++.||+.|++|||++ |||||||||+|||+|+||++|
T Consensus 144 QD~~sLYFvLe~A~nGdll~~i~K~------Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhik 214 (604)
T KOG0592|consen 144 QDEESLYFVLEYAPNGDLLDLIKKY------GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIK 214 (604)
T ss_pred ecccceEEEEEecCCCcHHHHHHHh------CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEE
Confidence 6778999999999999999999987 7899999999999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCcc---cc--CCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCC
Q 001782 851 VGDFGLARFLPPCSPATI---LE--TPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDG 925 (1013)
Q Consensus 851 l~DFG~a~~~~~~~~~~~---~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~ 925 (1013)
|+|||.|+.+++...... .. .......++||..|.+||++..+..++++|||+|||++|+|+.|.+||... ++-
T Consensus 215 ITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~-Ney 293 (604)
T KOG0592|consen 215 ITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA-NEY 293 (604)
T ss_pred EeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc-cHH
Confidence 999999999876543311 11 111235689999999999999999999999999999999999999999763 111
Q ss_pred ccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 926 LTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..+.+ +++ .+++ ..+..++...+|+.+.+..||.+|+|+.||.+
T Consensus 294 liFqk------------I~~----l~y~--------------fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 294 LIFQK------------IQA----LDYE--------------FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHH------------HHH----hccc--------------CCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 11111 111 1110 00112244667888888899999999987765
No 15
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-43 Score=374.35 Aligned_cols=408 Identities=23% Similarity=0.265 Sum_probs=307.2
Q ss_pred cCCcccCCcccceEEeccCCccccCCCCccccCCCCceeccccccccCCCCCccccccccccceecccccccccCCCCcc
Q 001782 115 EIPGEIGRLFRLETLILANNSFSGKIPSNLSRCSNLINFHARGNNLVGQIPPDIGYSWLKLEFLSLRDNLLAGQLAPSIG 194 (1013)
Q Consensus 115 ~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 194 (1013)
..|+...... ..||.+++.+.. ++.-.+.|.+|. .-+.|++++|.+..+.+..|-
T Consensus 45 ~cpa~c~c~~--~lldcs~~~lea----------------~~~~~l~g~lp~-------~t~~LdlsnNkl~~id~~~f~ 99 (873)
T KOG4194|consen 45 ECPATCPCNT--RLLDCSDRELEA----------------IDKSRLKGFLPS-------QTQTLDLSNNKLSHIDFEFFY 99 (873)
T ss_pred cCCCcCCCCc--eeeecCcccccc----------------ccccccCCcCcc-------ceeeeeccccccccCcHHHHh
Confidence 4555544433 347777776651 112234455554 346799999999999899999
Q ss_pred CCCCcceeeecccccCCCCCCccccccccceeecccccccCCCcchhccCCccceeeccCCccCCCCCCCcCCCCCCCcE
Q 001782 195 NISNLQVLSIGENRLSGRLPDSLGQLRSLYYLSISENAFSGMFPSSIFNISSLESISLLGNRLEGSLPVNIGFSLPNLEN 274 (1013)
Q Consensus 195 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~ 274 (1013)
++++|+++++.+|.++ .||...+...+|+.|+|.+|.|+..-.+.+..++.|+.||||.|.|+ .+|..-+..-.++++
T Consensus 100 nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is-~i~~~sfp~~~ni~~ 177 (873)
T KOG4194|consen 100 NLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLIS-EIPKPSFPAKVNIKK 177 (873)
T ss_pred cCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhh-cccCCCCCCCCCceE
Confidence 9999999999999999 89987777778999999999999888889999999999999999999 899887766689999
Q ss_pred EEeeeccccccCCCCCCCCCCCceEEcccCcccccccccccCCCCccccccccCcCCCCCCCChhhhhhccccccccccc
Q 001782 275 LSVRQNNYTGSLPHSLSNASNLRLLDFSLNHFSGQVKIDFNRLPNLFRLSFSKNNLGTGAIGDLDFIAHLTNCSKLEALG 354 (1013)
Q Consensus 275 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~ 354 (1013)
|+|++|+|+..-...|.++.+|..|.|++|+++...+..|.+++.|+.|+|.+|.|+...
T Consensus 178 L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive-------------------- 237 (873)
T KOG4194|consen 178 LNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVE-------------------- 237 (873)
T ss_pred EeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeeh--------------------
Confidence 999999999888899999999999999999999999999999999999999999987632
Q ss_pred ccccccCCccchhhhcchhhHHHHhccchhHHhhcccccceeecccccccCCcccccCCCCCCCEEEccCCccCccCCcc
Q 001782 355 LDTNIFGGVLPLSIANLSSTIILFSMGLNQIYVKNLVNLNGFGLEYNQLTGPIPHAIGELRNLQVLDLHHNNLDGHIPES 434 (1013)
Q Consensus 355 l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 434 (1013)
...|+++++|+.|.|..|.|...-..+|..+.++++|+|+.|+++..-..+
T Consensus 238 -----------------------------~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~ 288 (873)
T KOG4194|consen 238 -----------------------------GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGW 288 (873)
T ss_pred -----------------------------hhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhccc
Confidence 123555666666666666666666666777777777777777777666666
Q ss_pred ccccCccCEEEcCCCcccCCCCcccccCcccceeecccccccccCCchhhcccchhhhhccCCCeecccCCccccCcCCC
Q 001782 435 LGNLTILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSILLDLSGNLLTGSIPAEVGNLKNL 514 (1013)
Q Consensus 435 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L 514 (1013)
+.+++.|+.|+||+|.|...-+++....++|++|+|++|+|+ .++++-+..+..|+.|+|++|.++..--..|..+.+|
T Consensus 289 lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~-~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL 367 (873)
T KOG4194|consen 289 LFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT-RLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSL 367 (873)
T ss_pred ccccchhhhhccchhhhheeecchhhhcccceeEeccccccc-cCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhh
Confidence 777777777777777777666666666677777777777777 5555555557777777777777765555566677777
Q ss_pred cEEEccCCCCCCCCcc---ccccccccccccccccccccccCccccccCCCCeEeccccccccccccccccccccceeec
Q 001782 515 VQLGLSENRFSNEIPV---SLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRNNLSGQIPEFLENLSFLEYLNL 591 (1013)
Q Consensus 515 ~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 591 (1013)
+.|||++|.|+..+-+ .|.++++|+.|.|.+|+|..+.-.+|.+++.|++|||.+|.|..+.|+.|..+ .|+.|-+
T Consensus 368 ~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~ 446 (873)
T KOG4194|consen 368 HKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVM 446 (873)
T ss_pred hhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhh
Confidence 7777777777655432 36667777777777777775444567777777777777777777777777776 6777666
Q ss_pred CCccCCCCC
Q 001782 592 SYNHLEGEV 600 (1013)
Q Consensus 592 ~~N~l~~~~ 600 (1013)
..-.+-|.+
T Consensus 447 nSssflCDC 455 (873)
T KOG4194|consen 447 NSSSFLCDC 455 (873)
T ss_pred cccceEEec
Confidence 655554443
No 16
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.4e-41 Score=385.21 Aligned_cols=266 Identities=26% Similarity=0.477 Sum_probs=219.5
Q ss_pred hccCCCCCceeeccceEEEEEEEC-----CCCeEEEEEEEeecccc-chhHHHHHHHHHhcCCCCccceEEEEeecCCcc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLG-----ENEMAVAVKVMNLKQRG-ATKSFVAECEALRNIRHRNLIKIITVCSSIDFE 771 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 771 (1013)
+.+....+.||+|+||.||+|+.. +....||||.++..... ..++|++|++.+..++|||||+++|+|..
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~---- 560 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE---- 560 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc----
Confidence 345566789999999999999874 34578999999866665 67889999999999999999999999964
Q ss_pred ccceEEEEEeeccCCCHHHHhhccccccc--------cCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEe
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQLE--------VGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLL 843 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll 843 (1013)
++..++|+|||+.|+|.+|++....... ..+++..+.+.||.|||.||+||-++ .+|||||..+|+||
T Consensus 561 -~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 561 -GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLV 636 (774)
T ss_pred -CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhcee
Confidence 4789999999999999999987643321 23488999999999999999999999 99999999999999
Q ss_pred cCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcC
Q 001782 844 DHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMF 922 (1013)
Q Consensus 844 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~ 922 (1013)
.++..|||+|||+++.....+.+.. .....-+++|||||.+..++++.++|||||||++||+++ |+.||....
T Consensus 637 ge~l~VKIsDfGLsRdiYssDYYk~------~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS 710 (774)
T KOG1026|consen 637 GENLVVKISDFGLSRDIYSSDYYKV------RGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS 710 (774)
T ss_pred ccceEEEecccccchhhhhhhhhcc------cCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc
Confidence 9999999999999996654433332 223345789999999999999999999999999999998 999998754
Q ss_pred CCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 923 NDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
+++ +.+.+... ..++.++.||.++++||..||+.+|++||+++||-..|+
T Consensus 711 n~E--------------VIe~i~~g----------------~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 711 NQE--------------VIECIRAG----------------QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred hHH--------------HHHHHHcC----------------CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 331 11111110 113344678999999999999999999999999999999
Q ss_pred Hhhhh
Q 001782 1003 SARKI 1007 (1013)
Q Consensus 1003 ~~~~~ 1007 (1013)
+..+.
T Consensus 761 ~~~~~ 765 (774)
T KOG1026|consen 761 AWAQA 765 (774)
T ss_pred HHHhc
Confidence 87654
No 17
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-42 Score=362.86 Aligned_cols=274 Identities=21% Similarity=0.303 Sum_probs=209.9
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchh-HHHHHHHHHhcCC-CCccceEEEEeecCCccccce
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATK-SFVAECEALRNIR-HRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 775 (1013)
-++|.+.++||.|.||.||+|+...++..||||.++.+-....+ .=.+|+..++++. ||||+++.+++. +.+..
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~----d~~~~ 84 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIR----DNDRI 84 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhh----ccCce
Confidence 46899999999999999999999999999999999744333222 2368999999998 999999999963 33348
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++|||||+ .+|+++++.++ +.+++.+++.|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||
T Consensus 85 L~fVfE~Md-~NLYqLmK~R~-----r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFG 155 (538)
T KOG0661|consen 85 LYFVFEFMD-CNLYQLMKDRN-----RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFG 155 (538)
T ss_pred EeeeHHhhh-hhHHHHHhhcC-----CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccc
Confidence 999999999 89999999873 5899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
+|+.+.. ....+.++.|.+|+|||++.. +-|+.+.||||+|||++|+.+-++.|.+...-+. +-++...
T Consensus 156 LARev~S---------kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dq-i~KIc~V 225 (538)
T KOG0661|consen 156 LAREVRS---------KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQ-IYKICEV 225 (538)
T ss_pred ccccccc---------CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHH-HHHHHHH
Confidence 9996543 223556789999999998655 6789999999999999999999999987533222 2222111
Q ss_pred hCChh------HHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 935 ALPEK------VMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 935 ~~~~~------~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
...+. ...+.. .+.... +.+...... .-...+..+..+++.+|+++||.+||||+|+++.
T Consensus 226 LGtP~~~~~~eg~~La~-~mnf~~----P~~~~~~l~-~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 226 LGTPDKDSWPEGYNLAS-AMNFRF----PQVKPSPLK-DLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hCCCccccchhHHHHHH-HhccCC----CcCCCCChH-HhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 11111 111111 111111 111111100 1112256778999999999999999999999863
No 18
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.1e-44 Score=371.67 Aligned_cols=480 Identities=26% Similarity=0.344 Sum_probs=398.0
Q ss_pred CCCCCCCeeeeccCCccccCCcccCCcccceEEeccCCccccCCCCccccCCCCceeccccccccCCCCCcccccccccc
Q 001782 97 GNLSFLRFINFANNGFSGEIPGEIGRLFRLETLILANNSFSGKIPSNLSRCSNLINFHARGNNLVGQIPPDIGYSWLKLE 176 (1013)
Q Consensus 97 ~~l~~L~~L~l~~n~l~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~ 176 (1013)
.+-..|+.|++++|.+. .+-+.+.+|..|++|++.+|+++ ..|++++.+.+++.|+.++|+++ .+|..+. ++..|.
T Consensus 42 W~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~-s~~~l~ 117 (565)
T KOG0472|consen 42 WEQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIG-SLISLV 117 (565)
T ss_pred hhhcchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHh-hhhhhh
Confidence 44567889999999999 77778999999999999999999 89999999999999999999999 8999887 788999
Q ss_pred ceecccccccccCCCCccCCCCcceeeecccccCCCCCCccccccccceeecccccccCCCcchhccCCccceeeccCCc
Q 001782 177 FLSLRDNLLAGQLAPSIGNISNLQVLSIGENRLSGRLPDSLGQLRSLYYLSISENAFSGMFPSSIFNISSLESISLLGNR 256 (1013)
Q Consensus 177 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~ 256 (1013)
.|+.++|.+. .++++++.+..|+.|+..+|+++ ..|..++++.+|..|++.+|+++...|..+. +++|++||...|.
T Consensus 118 ~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~ 194 (565)
T KOG0472|consen 118 KLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNL 194 (565)
T ss_pred hhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhh
Confidence 9999999998 67888999999999999999999 7999999999999999999999955555444 9999999999999
Q ss_pred cCCCCCCCcCCCCCCCcEEEeeeccccccCCCCCCCCCCCceEEcccCcccccccccccCCCCccccccccCcCCCCCCC
Q 001782 257 LEGSLPVNIGFSLPNLENLSVRQNNYTGSLPHSLSNASNLRLLDFSLNHFSGQVKIDFNRLPNLFRLSFSKNNLGTGAIG 336 (1013)
Q Consensus 257 l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 336 (1013)
++ .+|..++ .+.+|..|+|..|+|. .+| .|.+++.|++|+++.|+|..........++++..|||.+|++++.+
T Consensus 195 L~-tlP~~lg-~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~P-- 268 (565)
T KOG0472|consen 195 LE-TLPPELG-GLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVP-- 268 (565)
T ss_pred hh-cCChhhc-chhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCc--
Confidence 98 9999998 7999999999999998 677 8999999999999999999877777789999999999999998743
Q ss_pred ChhhhhhcccccccccccccccccCCccchhhhcchhhHHHHhccchhHHhhcccccceeecccccccCCcccccCCCC-
Q 001782 337 DLDFIAHLTNCSKLEALGLDTNIFGGVLPLSIANLSSTIILFSMGLNQIYVKNLVNLNGFGLEYNQLTGPIPHAIGELR- 415 (1013)
Q Consensus 337 ~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~- 415 (1013)
..+.-+.+|+.|++++|.+++. |.+++++ +|+.|.+.+|.+..+-.+-+..-+
T Consensus 269 -----de~clLrsL~rLDlSNN~is~L-p~sLgnl--------------------hL~~L~leGNPlrTiRr~ii~~gT~ 322 (565)
T KOG0472|consen 269 -----DEICLLRSLERLDLSNNDISSL-PYSLGNL--------------------HLKFLALEGNPLRTIRREIISKGTQ 322 (565)
T ss_pred -----hHHHHhhhhhhhcccCCccccC-Ccccccc--------------------eeeehhhcCCchHHHHHHHHcccHH
Confidence 3445566777777777777654 3344433 466666777776532222221110
Q ss_pred -CCCEEE-------ccCCcc----Ccc-CCc---cccccCccCEEEcCCCcccCCCCcccccCcc---cceeeccccccc
Q 001782 416 -NLQVLD-------LHHNNL----DGH-IPE---SLGNLTILNSLDLGFNKLRGHVPSSLGNCQN---LMLLSVSNNKLT 476 (1013)
Q Consensus 416 -~L~~L~-------L~~N~l----~~~-~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~ 476 (1013)
-|++|. ++.-+= .+. .+. ....+.+.+.|+++.=+++ .+|.....-.+ .+..+++.|++.
T Consensus 323 ~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~ 401 (565)
T KOG0472|consen 323 EVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC 401 (565)
T ss_pred HHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh
Confidence 011111 111100 000 111 1223567899999999999 67776655544 789999999999
Q ss_pred ccCCchhhcccchhhhhccCCCeecccCCccccCcCCCcEEEccCCCCCCCCccccccccccccccccccccccccCccc
Q 001782 477 GALPPQILGIVTLSILLDLSGNLLTGSIPAEVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPLAL 556 (1013)
Q Consensus 477 ~~~p~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 556 (1013)
++|..+.......+.+++++|.+. .+|..++.+++|..|+|++|.+. .+|.+++.+..|+.|++|.|++. .+|..+
T Consensus 402 -elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~ 477 (565)
T KOG0472|consen 402 -ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECL 477 (565)
T ss_pred -hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHH
Confidence 999998886666777888888887 78999999999999999999997 89999999999999999999999 899999
Q ss_pred cccCCCCeEeccccccccccccccccccccceeecCCccCCCCCCCCCccCCCcceeeeCCcCC
Q 001782 557 KTLKSIKELDLSRNNLSGQIPEFLENLSFLEYLNLSYNHLEGEVPRRGVFSNKTRFYFTGNKRL 620 (1013)
Q Consensus 557 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~ 620 (1013)
..+..|+.+-.++|++....|..+.+|.+|..|||.+|.+...+|..+...+++.+.+.|||.-
T Consensus 478 y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 478 YELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 9999999999999999977777799999999999999999999999999999999999999863
No 19
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.1e-40 Score=325.88 Aligned_cols=277 Identities=22% Similarity=0.284 Sum_probs=211.6
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc--chhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG--ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.+|...+++|+|.||.||+|++.++++.||||.++..... -.....+|++.|+.++|+||+.++++ +...+..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~-----F~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDV-----FPHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhh-----ccCCCce
Confidence 4788889999999999999999999999999999855332 23567899999999999999999999 4566889
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
.+|+|||+ .+|+..++... ..++..++..++.++++|++|+|++ .|+||||||.|+|++++|.+||+|||+
T Consensus 77 ~lVfEfm~-tdLe~vIkd~~-----i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 77 SLVFEFMP-TDLEVVIKDKN-----IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred EEEEEecc-ccHHHHhcccc-----cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccc
Confidence 99999999 89999998764 4788999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
|+.+...... ....+-|.+|+|||.+.|. .|+..+||||.||++.||+-|.+-|.+. .+.+++..+.+..
T Consensus 148 Ar~f~~p~~~--------~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~-sDidQL~~If~~L 218 (318)
T KOG0659|consen 148 ARFFGSPNRI--------QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD-SDIDQLSKIFRAL 218 (318)
T ss_pred hhccCCCCcc--------cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC-chHHHHHHHHHHc
Confidence 9988654332 2233679999999998885 6999999999999999999998777663 3333344333332
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
..+...+|-+-.--.|+.+-........ ......+.....+++..|+.+||.+|+|+.|++++
T Consensus 219 GTP~~~~WP~~~~lpdY~~~~~~P~~~~--~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 219 GTPTPDQWPEMTSLPDYVKIQQFPKPPL--NNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCCCcccCccccccccHHHHhcCCCCcc--ccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 2221111111111111111000000000 00122344556899999999999999999999864
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.8e-41 Score=354.52 Aligned_cols=281 Identities=24% Similarity=0.322 Sum_probs=216.3
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
.+.|+..++||+|.||.||+|++..+++.||+|.++.+. .+......+||.+|++++||||+++.+..... ....
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~~s 192 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LSGS 192 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CCce
Confidence 456777899999999999999999999999999998665 33445678999999999999999999997643 3478
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.|+|+|||+ .+|..++.... -.|++.++..++.|++.||+|+|.+ ||+|||||.+|||||.+|.+||+|||
T Consensus 193 iYlVFeYMd-hDL~GLl~~p~-----vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFG 263 (560)
T KOG0600|consen 193 IYLVFEYMD-HDLSGLLSSPG-----VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFG 263 (560)
T ss_pred EEEEEeccc-chhhhhhcCCC-----cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEecccc
Confidence 999999999 89999887642 4799999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
+|+++...... ..+..+-|.+|+|||.+.|. .|+.++|+||.|||+.||++|++.|+.. .+-.++..+.+.
T Consensus 264 LAr~y~~~~~~-------~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~-tEveQl~kIfkl 335 (560)
T KOG0600|consen 264 LARFYTPSGSA-------PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR-TEVEQLHKIFKL 335 (560)
T ss_pred ceeeccCCCCc-------ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc-cHHHHHHHHHHH
Confidence 99988654432 25567789999999998885 7999999999999999999999999874 233344444443
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..++.-..|-...+-.--..++... ..+.-.+.....+...++++..+|..||.+|.||.++++
T Consensus 336 cGSP~e~~W~~~kLP~~~~~kp~~~-y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 336 CGSPTEDYWPVSKLPHATIFKPQQP-YKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred hCCCChhccccccCCcccccCCCCc-ccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 3322211111100100000011100 001111223445566788999999999999999999875
No 21
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-41 Score=363.89 Aligned_cols=252 Identities=23% Similarity=0.351 Sum_probs=215.1
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
....|...++||+|+.|.||.|+...+++.||||++........+-+.+|+.+|+..+|+|||.+++.+ ...+..
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sy-----lv~deL 345 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSY-----LVGDEL 345 (550)
T ss_pred hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHh-----ccccee
Confidence 355788889999999999999999999999999999988777778899999999999999999999985 344889
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
|+|||||+||+|.+.+... .+++.++..|+.+++.||+|||.+ ||+|||||.+|||++.+|.+||+|||+
T Consensus 346 WVVMEym~ggsLTDvVt~~-------~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGF 415 (550)
T KOG0578|consen 346 WVVMEYMEGGSLTDVVTKT-------RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGF 415 (550)
T ss_pred EEEEeecCCCchhhhhhcc-------cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeee
Confidence 9999999999999999875 689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+..+... .......+||+.|||||++....|++++||||||++++||+.|++||-.. ..++...
T Consensus 416 caqi~~~--------~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE----~PlrAly---- 479 (550)
T KOG0578|consen 416 CAQISEE--------QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE----NPLRALY---- 479 (550)
T ss_pred eeccccc--------cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC----ChHHHHH----
Confidence 9866532 22466789999999999999999999999999999999999999999651 1111110
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
++ .....+++...+.....+.+++.+||..||.+||+|.|+++
T Consensus 480 ------LI--------------a~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 480 ------LI--------------ATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred ------HH--------------hhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 00 01122233334455677899999999999999999999986
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=347.08 Aligned_cols=266 Identities=22% Similarity=0.297 Sum_probs=212.3
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
....|++.++||.|..++||+|+....+..||||++..+.- ...+.+.+|+..|+.++||||++++..| ..+..
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sF-----vv~~~ 98 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSF-----VVDSE 98 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEE-----Eecce
Confidence 35689999999999999999999999999999999985543 3357899999999999999999999885 45588
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.|+||+||.+|++.++++.... ..+++..+..|.+++++||.|||.+ |.||||||+.|||++.+|.|||+|||
T Consensus 99 LWvVmpfMa~GS~ldIik~~~~----~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFg 171 (516)
T KOG0582|consen 99 LWVVMPFMAGGSLLDIIKTYYP----DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFG 171 (516)
T ss_pred eEEeehhhcCCcHHHHHHHHcc----ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCce
Confidence 9999999999999999998754 4699999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCC--CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG--GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
.+..+..... +...+....+||+.|||||++.. ..|+.|+||||||++..|+.+|..||.....-.....
T Consensus 172 vsa~l~~~G~----R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~---- 243 (516)
T KOG0582|consen 172 VSASLFDSGD----RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLL---- 243 (516)
T ss_pred eeeeecccCc----eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHH----
Confidence 8876544221 11112266789999999999654 4699999999999999999999999987532211111
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.+..+|. .........++.......+.+++..|++.||++||||+++++
T Consensus 244 -------------tLqn~pp----~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 244 -------------TLQNDPP----TLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred -------------HhcCCCC----CcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 1111111 000111112222334457889999999999999999999975
No 23
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-41 Score=364.84 Aligned_cols=268 Identities=28% Similarity=0.425 Sum_probs=213.9
Q ss_pred hhhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCC
Q 001782 692 ADLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSID 769 (1013)
Q Consensus 692 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 769 (1013)
.++....+++.+.+.||+|.||+||+|++.++ ||||++..+.. +..+.|++|+.++++-+|.||+-++|+|...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p- 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP- 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC-
Confidence 55556667788899999999999999999755 99999985543 3457899999999999999999999997533
Q ss_pred ccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCce
Q 001782 770 FEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVA 849 (1013)
Q Consensus 770 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 849 (1013)
. ..+|+.+|+|-+|+.+++..+ ..++..+.+.||.|||+|+.|||.+ +|||||+|..||++.+++.|
T Consensus 461 ----~-~AIiTqwCeGsSLY~hlHv~e-----tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kV 527 (678)
T KOG0193|consen 461 ----P-LAIITQWCEGSSLYTHLHVQE-----TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKV 527 (678)
T ss_pred ----c-eeeeehhccCchhhhhccchh-----hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcE
Confidence 3 389999999999999999875 3789999999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCccccCCCCCcccccccccccccccCCC---CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCc
Q 001782 850 HVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG---DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGL 926 (1013)
Q Consensus 850 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~ 926 (1013)
||+|||++..-... ..........|...|||||++..+ +|++++||||||+|+|||++|..||.....+..
T Consensus 528 kIgDFGLatvk~~w------~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI 601 (678)
T KOG0193|consen 528 KIGDFGLATVKTRW------SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI 601 (678)
T ss_pred EEecccceeeeeee------ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe
Confidence 99999999754322 112223345678899999998653 689999999999999999999999983211111
Q ss_pred cHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhh
Q 001782 927 TLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARK 1006 (1013)
Q Consensus 927 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1006 (1013)
.+..- +..+..|+ ......|++++.+|+..||..++++||.+.+|+.+|+++..
T Consensus 602 ifmVG-------------rG~l~pd~-------------s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 602 IFMVG-------------RGYLMPDL-------------SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred EEEec-------------ccccCccc-------------hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 11000 00000111 11224667889999999999999999999999999998876
Q ss_pred hh
Q 001782 1007 IF 1008 (1013)
Q Consensus 1007 ~~ 1008 (1013)
+.
T Consensus 656 ~~ 657 (678)
T KOG0193|consen 656 SL 657 (678)
T ss_pred cc
Confidence 43
No 24
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=349.32 Aligned_cols=262 Identities=26% Similarity=0.369 Sum_probs=205.3
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
..+|...+.||+|+||+||++.+..++...|||.+........+.+.+|+.+|++++|||||+++|..... +...++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~---~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSR---ENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccc---cCeeeE
Confidence 34678889999999999999999988999999999866443356789999999999999999999973322 113789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC-CCceEEccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH-DMVAHVGDFGL 856 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~ 856 (1013)
+.|||+++|+|.+++.... +.+++..+.++..||++||+|||++ |||||||||+|||++. ++.+||+|||.
T Consensus 93 i~mEy~~~GsL~~~~~~~g-----~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~ 164 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYG-----GKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGL 164 (313)
T ss_pred eeeeccCCCcHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcc
Confidence 9999999999999999873 2689999999999999999999999 9999999999999999 79999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
++..... ...........||+.|||||++..+ ...+++||||+||++.||+||+.||... .. .........
T Consensus 165 a~~~~~~-----~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~--~~~~~~~ig 236 (313)
T KOG0198|consen 165 AKKLESK-----GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FE--EAEALLLIG 236 (313)
T ss_pred ccccccc-----cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cc--hHHHHHHHh
Confidence 9865430 1122334567899999999999954 3446999999999999999999999763 00 000000000
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
... ..| .+ +...+....+++.+|+..||++||||+|+++.--.
T Consensus 237 --------~~~---~~P------------~i--p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 237 --------RED---SLP------------EI--PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred --------ccC---CCC------------CC--CcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 000 000 00 11234567889999999999999999999986543
No 25
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=362.20 Aligned_cols=366 Identities=24% Similarity=0.261 Sum_probs=248.2
Q ss_pred eEEeccCCccccCCCCccccCCCCceeccccccccCCCCCccccccccccceecccccccccCCCCccCCCCcceeeecc
Q 001782 127 ETLILANNSFSGKIPSNLSRCSNLINFHARGNNLVGQIPPDIGYSWLKLEFLSLRDNLLAGQLAPSIGNISNLQVLSIGE 206 (1013)
Q Consensus 127 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 206 (1013)
++||+|+|+++..-+..|.++++|+++.+..|.++ .||.... ...+|+.|+|.+|.|+..-.+.+..++.|+.||||.
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~-~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGH-ESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccc-cccceeEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 45666666666555555666666666666666555 4443221 112233333333333333334444455555555555
Q ss_pred cccCCCCCCccccccccceeecccccccCCCcchhccCCccceeeccCCccCCCCCCCcCCCCCCCcEEEeeeccccccC
Q 001782 207 NRLSGRLPDSLGQLRSLYYLSISENAFSGMFPSSIFNISSLESISLLGNRLEGSLPVNIGFSLPNLENLSVRQNNYTGSL 286 (1013)
Q Consensus 207 n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~ 286 (1013)
|.|+..--.+|..-.++++|+|++|.|+..-...|.++.+|.+|.|++|+++ .+|..
T Consensus 159 N~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit-tLp~r---------------------- 215 (873)
T KOG4194|consen 159 NLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT-TLPQR---------------------- 215 (873)
T ss_pred chhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc-ccCHH----------------------
Confidence 5555322234444445555555555555444444555555555555555554 44444
Q ss_pred CCCCCCCCCCceEEcccCcccccccccccCCCCccccccccCcCCCCCCCChhhhhhcccccccccccccccccCCccch
Q 001782 287 PHSLSNASNLRLLDFSLNHFSGQVKIDFNRLPNLFRLSFSKNNLGTGAIGDLDFIAHLTNCSKLEALGLDTNIFGGVLPL 366 (1013)
Q Consensus 287 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~ 366 (1013)
.|.++++|+.|+|.+|+|.-..-..|.++++|+.|.|.+|+|...
T Consensus 216 --~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL--------------------------------- 260 (873)
T KOG4194|consen 216 --SFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKL--------------------------------- 260 (873)
T ss_pred --HhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccc---------------------------------
Confidence 444555555555555555544344566666666666666665432
Q ss_pred hhhcchhhHHHHhccchhHHhhcccccceeecccccccCCcccccCCCCCCCEEEccCCccCccCCccccccCccCEEEc
Q 001782 367 SIANLSSTIILFSMGLNQIYVKNLVNLNGFGLEYNQLTGPIPHAIGELRNLQVLDLHHNNLDGHIPESLGNLTILNSLDL 446 (1013)
Q Consensus 367 ~~~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 446 (1013)
++..|-.+.++++|+|+.|+++..-..++.++++|+.|+||+|.|..+.++.+...++|++|+|
T Consensus 261 ----------------~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdL 324 (873)
T KOG4194|consen 261 ----------------DDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDL 324 (873)
T ss_pred ----------------cCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEec
Confidence 2223445667777777778887777788888999999999999999888888888899999999
Q ss_pred CCCcccCCCCcccccCcccceeecccccccccCCchhhcccchhhhhccCCCeecccCCc---cccCcCCCcEEEccCCC
Q 001782 447 GFNKLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSILLDLSGNLLTGSIPA---EVGNLKNLVQLGLSENR 523 (1013)
Q Consensus 447 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~Ls~N~ 523 (1013)
++|+|+...+..|..+..|++|+|++|+++ .+.+..+..+++|+.|||++|.+++.+-+ .|.++++|+.|+|.+|+
T Consensus 325 s~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~-~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNq 403 (873)
T KOG4194|consen 325 SSNRITRLDEGSFRVLSQLEELNLSHNSID-HLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQ 403 (873)
T ss_pred cccccccCChhHHHHHHHhhhhcccccchH-HHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCce
Confidence 999999877888889999999999999998 67777777789999999999998876643 57789999999999999
Q ss_pred CCCCCccccccccccccccccccccccccCccccccCCCCeEecccc
Q 001782 524 FSNEIPVSLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRN 570 (1013)
Q Consensus 524 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 570 (1013)
|+.+.-.+|.++.+|++|+|.+|.|..+-|++|..+ .|++|.+..-
T Consensus 404 lk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSs 449 (873)
T KOG4194|consen 404 LKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSS 449 (873)
T ss_pred eeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhccc
Confidence 996556789999999999999999999999999998 8999987653
No 26
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=354.16 Aligned_cols=246 Identities=27% Similarity=0.403 Sum_probs=207.1
Q ss_pred CCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEe
Q 001782 702 SSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 702 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
...+-||.|+.|.||+|+.+ ++.||||.++. .-..+|+-|++++||||+.+.|+|... ..+|||||
T Consensus 127 sELeWlGSGaQGAVF~Grl~--netVAVKKV~e-------lkETdIKHLRkLkH~NII~FkGVCtqs-----PcyCIiME 192 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH--NETVAVKKVRE-------LKETDIKHLRKLKHPNIITFKGVCTQS-----PCYCIIME 192 (904)
T ss_pred hhhhhhccCcccceeeeecc--CceehhHHHhh-------hhhhhHHHHHhccCcceeeEeeeecCC-----ceeEEeee
Confidence 34578999999999999996 66899998752 223688899999999999999999754 78999999
Q ss_pred eccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCC
Q 001782 782 YMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLP 861 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 861 (1013)
||..|-|.++++.. ..+.......|..+||.|+.|||.+ .|||||||.-||||..+..|||+|||-++...
T Consensus 193 fCa~GqL~~VLka~------~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~ 263 (904)
T KOG4721|consen 193 FCAQGQLYEVLKAG------RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELS 263 (904)
T ss_pred ccccccHHHHHhcc------CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhh
Confidence 99999999999987 5688889999999999999999999 99999999999999999999999999988543
Q ss_pred CCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHH
Q 001782 862 PCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVM 941 (1013)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 941 (1013)
. ......+.||..|||||++...+.+.|+||||||||+|||+||..||.+.......+..
T Consensus 264 ~---------~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGV----------- 323 (904)
T KOG4721|consen 264 D---------KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGV----------- 323 (904)
T ss_pred h---------hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEec-----------
Confidence 2 23466789999999999999999999999999999999999999999875333221111
Q ss_pred HhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 001782 942 EIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARKIF 1008 (1013)
Q Consensus 942 ~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1008 (1013)
+.....++.+..|++.+.-++++||+..|..||++.+++..|+-+...+
T Consensus 324 ------------------GsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pel 372 (904)
T KOG4721|consen 324 ------------------GSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPEL 372 (904)
T ss_pred ------------------cCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHH
Confidence 0111123344678899999999999999999999999999988665443
No 27
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.1e-40 Score=351.42 Aligned_cols=237 Identities=31% Similarity=0.453 Sum_probs=198.7
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
++|.+.+.||+|.||.||+|+.+.+.+.||+|.+....+ .+.+.+.+|+++++.++||||+.++++ ++...+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~es-----fEt~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLES-----FETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHh-----hcccceE
Confidence 578899999999999999999999999999999974433 334668999999999999999999998 5677999
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
|+|+||+. |+|..++... +.++++.+..|+.|++.||.|||+. +|.|||+||+|||++.++.+|+||||+
T Consensus 77 ~vVte~a~-g~L~~il~~d------~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 77 WVVTEYAV-GDLFTILEQD------GKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred EEEehhhh-hhHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhh
Confidence 99999999 5999999876 6899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH-Hh-
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA-KM- 934 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~-~~- 934 (1013)
|+.+.. .........||+.|||||...+++|+..+|+||+||++||+++|++||....- ..+.+.+ ..
T Consensus 147 Ar~m~~--------~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si--~~Lv~~I~~d~ 216 (808)
T KOG0597|consen 147 ARAMST--------NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI--TQLVKSILKDP 216 (808)
T ss_pred hhhccc--------CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH--HHHHHHHhcCC
Confidence 997643 22335677899999999999999999999999999999999999999965211 1111111 10
Q ss_pred -----hCChhHHHhhhhhhccchhhhhccCC
Q 001782 935 -----ALPEKVMEIVDPLLLLDLEARASNCG 960 (1013)
Q Consensus 935 -----~~~~~~~~~i~~~l~~~~~~R~~~~~ 960 (1013)
..+..+..+++..+.+||..|.++..
T Consensus 217 v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~ 247 (808)
T KOG0597|consen 217 VKPPSTASSSFVNFLQGLLIKDPAQRLTWTD 247 (808)
T ss_pred CCCcccccHHHHHHHHHHhhcChhhcccHHH
Confidence 12334666777777777777776654
No 28
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=321.20 Aligned_cols=237 Identities=26% Similarity=0.365 Sum_probs=206.2
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
.++|+..+.||.|+||.|.+++.+.++..+|+|+++...- ...+...+|..+++.+.||+++++++.+ .+..
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~-----~d~~ 117 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF-----KDNS 117 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee-----ccCC
Confidence 4578899999999999999999999999999999975433 2335578899999999999999999884 4668
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..++||||++||.|..++++. +++++..++.+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+||
T Consensus 118 ~lymvmeyv~GGElFS~Lrk~------~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDF 188 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRKS------GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDF 188 (355)
T ss_pred eEEEEEeccCCccHHHHHHhc------CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEec
Confidence 999999999999999999987 6899999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
|+|+.+. ......+|||.|+|||++...++..++|.|||||++|||+.|.+||..... ...+..+...
T Consensus 189 GFAK~v~-----------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-~~iY~KI~~~ 256 (355)
T KOG0616|consen 189 GFAKRVS-----------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-IQIYEKILEG 256 (355)
T ss_pred cceEEec-----------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-HHHHHHHHhC
Confidence 9998653 225678999999999999999999999999999999999999999987433 3333443332
Q ss_pred ------hCChhHHHhhhhhhccchhhhhccCC
Q 001782 935 ------ALPEKVMEIVDPLLLLDLEARASNCG 960 (1013)
Q Consensus 935 ------~~~~~~~~~i~~~l~~~~~~R~~~~~ 960 (1013)
.++.++++++++.+..|-..|.....
T Consensus 257 ~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlk 288 (355)
T KOG0616|consen 257 KVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLK 288 (355)
T ss_pred cccCCcccCHHHHHHHHHHHhhhhHhhhcCcC
Confidence 24567899999999999999966554
No 29
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-39 Score=331.73 Aligned_cols=285 Identities=21% Similarity=0.271 Sum_probs=217.1
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEe--eccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMN--LKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
...+|...+.||+|+||.|+.|.+..+++.||||.+. .......++..+|+++++.++|+||+.+.+++.......-.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 4456777899999999999999999999999999987 45555667889999999999999999999998775556678
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..|+|+|+|+ .+|.+.++.+ ..++...+..+..|+++|+.|+|+. +|+|||+||+|++++.+...||+||
T Consensus 100 DvYiV~elMe-tDL~~iik~~------~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DF 169 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKSQ------QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDF 169 (359)
T ss_pred eeEEehhHHh-hHHHHHHHcC------ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccc
Confidence 8999999997 8999999987 4589999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
|+|+..... ......+..+.|.+|+|||.+.. ..|+.+.||||.|||+.||++|++.|.+...-. ++.....
T Consensus 170 GLAR~~~~~------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~-Ql~lI~~ 242 (359)
T KOG0660|consen 170 GLARYLDKF------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVH-QLQLILE 242 (359)
T ss_pred cceeecccc------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHH-HHHHHHH
Confidence 999976543 22334567888999999998654 579999999999999999999999998743221 1222111
Q ss_pred hh--CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 934 MA--LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 934 ~~--~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.. .+++....+...-...+-.... .....+.............+++.+|+..||.+|+|++|+++
T Consensus 243 ~lGtP~~e~l~~i~s~~ar~yi~slp-~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 243 LLGTPSEEDLQKIRSEKARPYIKSLP-QIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred hcCCCCHHHHHHhccHHHHHHHHhCC-CCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11 1111111111100111100000 00111112222344456789999999999999999999986
No 30
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.1e-38 Score=358.33 Aligned_cols=268 Identities=23% Similarity=0.349 Sum_probs=205.6
Q ss_pred hhccCCCCCceeeccceEEEEEEEC-----CCCeEEEEEEEeeccc-cchhHHHHHHHHHhcC-CCCccceEEEEeecCC
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLG-----ENEMAVAVKVMNLKQR-GATKSFVAECEALRNI-RHRNLIKIITVCSSID 769 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 769 (1013)
..++|++.++||+|+||.||+|.+. .++..||+|++..... ...+.+.+|+.+++.+ +||||++++++|.
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~--- 81 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT--- 81 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec---
Confidence 3568999999999999999999852 3456799999874322 2345688999999999 8999999999874
Q ss_pred ccccceEEEEEeeccCCCHHHHhhcccccc--------------------------------------------------
Q 001782 770 FEEVDFKAIVYEYMECGSLEDWLHQSNDQL-------------------------------------------------- 799 (1013)
Q Consensus 770 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------------------------------------------- 799 (1013)
......++||||+++|+|.+++.......
T Consensus 82 -~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 82 -KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred -CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 23456899999999999999997642110
Q ss_pred ------ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCCCCCccccCCC
Q 001782 800 ------EVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPS 873 (1013)
Q Consensus 800 ------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 873 (1013)
....+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++........ .
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~------~ 231 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------V 231 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcch------h
Confidence 013478889999999999999999999 9999999999999999999999999999865322111 1
Q ss_pred CCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccch
Q 001782 874 SSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDL 952 (1013)
Q Consensus 874 ~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 952 (1013)
......++..|+|||++.+..++.++|||||||++|||++ |..||........ ....+. ....
T Consensus 232 ~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-------------~~~~~~---~~~~ 295 (338)
T cd05102 232 RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-------------FCQRLK---DGTR 295 (338)
T ss_pred cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-------------HHHHHh---cCCC
Confidence 1223446788999999999999999999999999999997 9999976322110 000000 0000
Q ss_pred hhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhh
Q 001782 953 EARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARK 1006 (1013)
Q Consensus 953 ~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1006 (1013)
.+. ...++..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 296 -~~~------------~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 296 -MRA------------PENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred -CCC------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 000 01223467899999999999999999999999998865
No 31
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=351.55 Aligned_cols=250 Identities=26% Similarity=0.358 Sum_probs=204.3
Q ss_pred hhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec----cc-cchhHHHHHHHHHhcCC-CCccceEEEEeecCC
Q 001782 696 KATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK----QR-GATKSFVAECEALRNIR-HRNLIKIITVCSSID 769 (1013)
Q Consensus 696 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 769 (1013)
...++|.+.+.||+|+||.|+.|.+..++..||+|++... .. ...+.+.+|+.++++++ ||||+++++++.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~--- 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA--- 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe---
Confidence 4467999999999999999999999999999999977643 11 23456778999999998 999999999954
Q ss_pred ccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC-Cc
Q 001782 770 FEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD-MV 848 (1013)
Q Consensus 770 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~ 848 (1013)
.....++||||+.+|+|.+++... +++.+.++.+++.|++.|++|+|++ ||+||||||+||+++.+ ++
T Consensus 91 --t~~~~~ivmEy~~gGdL~~~i~~~------g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~ 159 (370)
T KOG0583|consen 91 --TPTKIYIVMEYCSGGDLFDYIVNK------GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGN 159 (370)
T ss_pred --cCCeEEEEEEecCCccHHHHHHHc------CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCC
Confidence 446699999999999999999985 6789999999999999999999999 99999999999999999 99
Q ss_pred eEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCC-CC-cccchHHHHHHHHHHHhCCCCCCCcCCCCc
Q 001782 849 AHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGD-MS-ATGDVYSFGILLLEMFTRRRPTDNMFNDGL 926 (1013)
Q Consensus 849 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DIwSlG~il~ell~G~~pf~~~~~~~~ 926 (1013)
+||+|||++.... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||++....
T Consensus 160 ~Kl~DFG~s~~~~--------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~-- 229 (370)
T KOG0583|consen 160 LKLSDFGLSAISP--------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP-- 229 (370)
T ss_pred EEEeccccccccC--------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH--
Confidence 9999999998653 1223356789999999999999977 76 6899999999999999999999862110
Q ss_pred cHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHH-HHHHHHHhhhcccCCCCCCCCHHHHH
Q 001782 927 TLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEEC-LVAIVRIGVLCSMESPSERIQMTDVV 998 (1013)
Q Consensus 927 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~-~~~l~~l~~~cl~~dP~~RPs~~evl 998 (1013)
... .. +.+.--.-| ... ...+..++.+|+..||.+|+|+.||+
T Consensus 230 ---~l~--------~k-i~~~~~~~p-----------------~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 230 ---NLY--------RK-IRKGEFKIP-----------------SYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred ---HHH--------HH-HhcCCccCC-----------------CCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 000 00 110000000 011 34578899999999999999999998
No 32
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-40 Score=344.43 Aligned_cols=250 Identities=22% Similarity=0.322 Sum_probs=207.7
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
...|+..+.||+|.||.||+|.+..+++.||+|++..+.. ...+++++|+.++..++++||.++|+.+. .+...
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl-----~g~~L 86 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYL-----KGTKL 86 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhee-----ecccH
Confidence 3467788999999999999999999999999999986544 44678999999999999999999999854 45789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
+++||||.||++.+.++.. ..+++.++.-|.+++..|+.|+|.+ +.+|||||+.||++..+|.+|++|||.
T Consensus 87 wiiMey~~gGsv~~lL~~~------~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgV 157 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKSG------NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGV 157 (467)
T ss_pred HHHHHHhcCcchhhhhccC------CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecce
Confidence 9999999999999999876 3447888888999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+..+.. ...+...++||+.|||||++.+..|+.|+||||||++.+||.+|.+|+........
T Consensus 158 a~ql~~--------~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv---------- 219 (467)
T KOG0201|consen 158 AGQLTN--------TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV---------- 219 (467)
T ss_pred eeeeec--------hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE----------
Confidence 976543 22334678999999999999998999999999999999999999999987533110
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+-.-|..-|... + ..+.+.+.+++..|++.||+.||+|.++++
T Consensus 220 -----------lflIpk~~PP~L-------~--~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 220 -----------LFLIPKSAPPRL-------D--GDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred -----------EEeccCCCCCcc-------c--cccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 000111111111 1 133456888999999999999999999986
No 33
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-39 Score=332.47 Aligned_cols=280 Identities=23% Similarity=0.306 Sum_probs=208.1
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
.-.|+..+++|.|+||.||+|...++++.||||..-.+.+ .-.+|+++|++++|||||++.-++......+.-+..
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 3467778999999999999999999999999998864433 224799999999999999999988765333345677
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC-CceEEccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD-MVAHVGDFGL 856 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~ 856 (1013)
+|||||+ .+|.++++.... ....++...+.-+..||.+|++|||+. +|+||||||+|+|||.+ |.+||||||.
T Consensus 99 lVleymP-~tL~~~~r~~~~--~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGS 172 (364)
T KOG0658|consen 99 LVLEYMP-ETLYRVIRHYTR--ANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGS 172 (364)
T ss_pred HHHHhch-HHHHHHHHHHhh--cCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCc
Confidence 9999999 899999986311 124688889999999999999999999 99999999999999976 8999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
|+.+..+.+ ......|..|+|||.+.+. .|+.+.||||.|||+.||+-|++.|.+. ....++.++.+..
T Consensus 173 AK~L~~~ep---------niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~-s~~dQL~eIik~l 242 (364)
T KOG0658|consen 173 AKVLVKGEP---------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD-SSVDQLVEIIKVL 242 (364)
T ss_pred ceeeccCCC---------ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC-CHHHHHHHHHHHh
Confidence 997754332 3456788999999998885 7999999999999999999999999873 3334445544443
Q ss_pred CChhHHHhhhhhhccchhhh-hccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEAR-ASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R-~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..+...++ ..|-...-+.+ |........+ -.....+.+..+++.+++.++|.+|.++.|++.
T Consensus 243 G~Pt~e~I-~~mn~~y~~~~~p~ik~~~~~~-~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 243 GTPTREDI-KSMNPNYTEFKFPQIKAHPWHK-VFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred CCCCHHHH-hhcCcccccccCccccccccee-ecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 22222221 11110000000 0000000000 011234566789999999999999999999875
No 34
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.9e-39 Score=321.86 Aligned_cols=277 Identities=24% Similarity=0.309 Sum_probs=209.6
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc--chhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG--ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
.+.|+...+|++|.||.||+|+++.+++.||+|.++.+... -.-...+|+.++.+.+|||||.+-.+... .+-+.
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG---~~~d~ 151 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVG---SNMDK 151 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEec---cccce
Confidence 45788899999999999999999999999999999855432 12346899999999999999999998753 34466
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.|+|||||+ .+|..+++..+ .++...++.-+..|+++|++|||.+ .|+|||+||+|+|+...|.+||+|||
T Consensus 152 iy~VMe~~E-hDLksl~d~m~-----q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFG 222 (419)
T KOG0663|consen 152 IYIVMEYVE-HDLKSLMETMK-----QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFG 222 (419)
T ss_pred eeeeHHHHH-hhHHHHHHhcc-----CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccc
Confidence 999999999 89999998874 4799999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
+|+.++.. ....+..+-|.+|+|||.+.+. .|+.+.|+||+|||+.||+++++.|.....-+. +..+...
T Consensus 223 LAR~ygsp--------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQ-l~~If~l 293 (419)
T KOG0663|consen 223 LAREYGSP--------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQ-LDKIFKL 293 (419)
T ss_pred hhhhhcCC--------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHH-HHHHHHH
Confidence 99977532 2335677889999999998885 589999999999999999999999987533322 2222221
Q ss_pred -hCChhHHHhhhhhhccch----hhhhcc-CCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 -ALPEKVMEIVDPLLLLDL----EARASN-CGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 -~~~~~~~~~i~~~l~~~~----~~R~~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..|.+. +-+....-| ..++.. ....+..+.... ..+.-.+++...+.+||.+|.||+|.++
T Consensus 294 lGtPte~---iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~-lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 294 LGTPSEA---IWPGYSELPAVKKMTFSEHPYNNLRKKFGALS-LSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred hCCCccc---cCCCccccchhhccccCCCCchhhhhhccccc-cchhHHHHHHHHhccCccccccHHHhhc
Confidence 112110 000000000 000000 001111111111 2345678999999999999999999875
No 35
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-40 Score=316.19 Aligned_cols=280 Identities=18% Similarity=0.231 Sum_probs=219.5
Q ss_pred hhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 696 KATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 696 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
...+||++.+.+|+|||+.||.++...++..+|+|++.....+..+..++|++..++++||||+++++++....-+....
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 34579999999999999999999998899999999998877777888999999999999999999999876543445567
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.|++++|...|+|.+.++..+.. ...+++.++++|+.+|++||++||+. .+.++||||||.||++.+++.+++.|||
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~k--g~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIK--GNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhc--CCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEecc
Confidence 89999999999999999876542 24799999999999999999999998 2359999999999999999999999999
Q ss_pred ccccCCCCCCCccc-cCCCCCcccccccccccccccCC---CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHH
Q 001782 856 LARFLPPCSPATIL-ETPSSSTGIKGTVGYVAPEYGMG---GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEF 931 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~ 931 (1013)
.++..+-....... ..-........|..|+|||.+.- ...+.++|||||||++|+|+.|..||+.....+..+.-.
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLA 254 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALA 254 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEe
Confidence 99865432211100 00011233457899999998754 357889999999999999999999998654433322111
Q ss_pred HHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhh
Q 001782 932 AKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSAR 1005 (1013)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1005 (1013)
+ ...-+.. | . ....++.+.+++..|++.||.+||++.|++..++.+.
T Consensus 255 v-----------~n~q~s~-P-------~--------~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 255 V-----------QNAQISI-P-------N--------SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred e-----------ecccccc-C-------C--------CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1 0000000 0 0 0113456889999999999999999999999998764
No 36
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=360.06 Aligned_cols=259 Identities=27% Similarity=0.470 Sum_probs=214.9
Q ss_pred CCCCCceeeccceEEEEEEECCCC---eEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENE---MAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
..+.++||.|.||.|++|+.+..+ ..||||.++.... ....+|..|+.||.+++||||+++.|+.+ .....
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVT-----ks~Pv 705 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVT-----KSKPV 705 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEe-----cCcee
Confidence 457789999999999999996544 6799999985543 34567999999999999999999999964 44788
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++|+|||++|+|+.|++.+. +.+++.+...+.++||.||.||.+. ++|||||.++||||+.+..+|++|||+
T Consensus 706 MIiTEyMENGsLDsFLR~~D-----GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGL 777 (996)
T KOG0196|consen 706 MIITEYMENGSLDSFLRQND-----GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGL 777 (996)
T ss_pred EEEhhhhhCCcHHHHHhhcC-----CceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccc
Confidence 99999999999999999875 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhh
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
++++.++.+.... ..+-.-+.+|.|||.+...+++.++||||||++|||.++ |..||.++.+.+.
T Consensus 778 SRvledd~~~~yt-----t~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV--------- 843 (996)
T KOG0196|consen 778 SRVLEDDPEAAYT-----TLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV--------- 843 (996)
T ss_pred eeecccCCCcccc-----ccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH---------
Confidence 9977654422211 111223579999999999999999999999999999887 9999987644321
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARKI 1007 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 1007 (1013)
...+.... +++.+.+|+..+.+||..||+.|-.+||.+.||+..|.++.+.
T Consensus 844 -----IkaIe~gy----------------RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 844 -----IKAIEQGY----------------RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred -----HHHHHhcc----------------CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 11111111 1233457899999999999999999999999999999987643
No 37
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-39 Score=364.61 Aligned_cols=273 Identities=21% Similarity=0.254 Sum_probs=214.9
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCC-CCccceEEEEe-ecCCccc-c
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIR-HRNLIKIITVC-SSIDFEE-V 773 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~-~~~~~~~-~ 773 (1013)
...++++.++|.+|||+.||.|++...+..||+|++-..+....+...+|+++|++++ |+|||.+++.. ....... .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 3457888999999999999999999887999999998777777788999999999996 99999999943 2221222 3
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
-++.+.||||+||.|-+++..+.. .++++.++++|+.|+++|+++||.. +++|||||||-+|||++.++..||||
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq----~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQ----TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHh----ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCc
Confidence 678899999999999999987644 4699999999999999999999997 56799999999999999999999999
Q ss_pred ccccccCCCCC-CCccccCCCCCcccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHH
Q 001782 854 FGLARFLPPCS-PATILETPSSSTGIKGTVGYVAPEYGM---GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLH 929 (1013)
Q Consensus 854 FG~a~~~~~~~-~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~ 929 (1013)
||.|...-... .......-........|+.|+|||++. +.++++|+|||||||++|-|+....||+....-
T Consensus 190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----- 264 (738)
T KOG1989|consen 190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----- 264 (738)
T ss_pred ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce-----
Confidence 99987432211 110000111122345799999999854 568999999999999999999999999863111
Q ss_pred HHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 001782 930 EFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARKI 1007 (1013)
Q Consensus 930 ~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 1007 (1013)
.++.......+ .......+.+||+.||++||.+||++.+|++.+.+++..
T Consensus 265 ------------aIlng~Y~~P~----------------~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 265 ------------AILNGNYSFPP----------------FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred ------------eEEeccccCCC----------------CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 11111111111 113356689999999999999999999999999998754
No 38
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-39 Score=376.10 Aligned_cols=269 Identities=26% Similarity=0.422 Sum_probs=216.9
Q ss_pred hccCCCCCceeeccceEEEEEEECCC-----CeEEEEEEEeec-cccchhHHHHHHHHHhcCCCCccceEEEEeecCCcc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGEN-----EMAVAVKVMNLK-QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFE 771 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 771 (1013)
....+..+.||+|+||.||.|..... ...||||.++.. +..+..+|.+|..+|+.++||||++++|+|..
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~---- 766 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD---- 766 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC----
Confidence 34456678999999999999988533 234899988744 34556789999999999999999999999854
Q ss_pred ccceEEEEEeeccCCCHHHHhhcccccc-ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceE
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQL-EVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAH 850 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 850 (1013)
....++++|||++|+|..|+++.+... ....+...+.+.++.|||+|+.||+++ ++|||||.++|+|+++...||
T Consensus 767 -~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VK 842 (1025)
T KOG1095|consen 767 -SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVK 842 (1025)
T ss_pred -CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEE
Confidence 477899999999999999999874422 234689999999999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHH
Q 001782 851 VGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLH 929 (1013)
Q Consensus 851 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~ 929 (1013)
|+|||+|+.+...+.... .....-+..|||||.+..+.++.|+|||||||++||+++ |..||.+..+.+...
T Consensus 843 IaDFGlArDiy~~~yyr~------~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~- 915 (1025)
T KOG1095|consen 843 IADFGLARDIYDKDYYRK------HGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL- 915 (1025)
T ss_pred EcccchhHhhhhchheec------cCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH-
Confidence 999999995433222211 111244679999999999999999999999999999999 999998753221100
Q ss_pred HHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhhhhh
Q 001782 930 EFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARKIFL 1009 (1013)
Q Consensus 930 ~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 1009 (1013)
.+... .+++++..|+..++++|.+||+.+|++||++..+++++..+.+...
T Consensus 916 ------------~~~~g-----------------gRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 916 ------------DVLEG-----------------GRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred ------------HHHhC-----------------CccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 01110 1334456789999999999999999999999999999999876654
Q ss_pred c
Q 001782 1010 S 1010 (1013)
Q Consensus 1010 ~ 1010 (1013)
.
T Consensus 967 ~ 967 (1025)
T KOG1095|consen 967 G 967 (1025)
T ss_pred c
Confidence 3
No 39
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-38 Score=346.01 Aligned_cols=249 Identities=23% Similarity=0.340 Sum_probs=206.6
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
.+-|+.++.||+|+.|.|-.|++..+|+.+|||++..... .....+.+|+-+|+.+.||||+++|++ +++..
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV-----we~~~ 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV-----WENKQ 85 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee-----eccCc
Confidence 4578899999999999999999999999999999975422 223568899999999999999999999 67779
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
++|+|.||+++|-|.+++-.. +++++.++.+++.||+.|+.|+|.. +|+|||+||+|+|+|..+++||+||
T Consensus 86 ~lylvlEyv~gGELFdylv~k------G~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADF 156 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRK------GPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADF 156 (786)
T ss_pred eEEEEEEecCCchhHHHHHhh------CCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeecc
Confidence 999999999999999999887 7899999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCC-cccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMS-ATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
|+|..-.++ .-....+|.+.|.|||++.|.+|. .++||||.|||+|.+++|+.||++. .++
T Consensus 157 GMAsLe~~g---------klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-----Nir---- 218 (786)
T KOG0588|consen 157 GMASLEVPG---------KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-----NIR---- 218 (786)
T ss_pred ceeecccCC---------ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-----cHH----
Confidence 999854332 224567899999999999999884 6899999999999999999999842 111
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.++.+..... ++.+...+.+.++|+++|+..||.+|.|++||++.
T Consensus 219 --------~LLlKV~~G~--------------f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 219 --------VLLLKVQRGV--------------FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred --------HHHHHHHcCc--------------ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 1111111110 11112334567888889999999999999998764
No 40
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-38 Score=327.31 Aligned_cols=249 Identities=23% Similarity=0.351 Sum_probs=207.5
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc---chhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG---ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
..+|++.+.||+|.||.|-+|.....|+.||||.++.+.-. +.-.+.+|+++|..++||||+.++.+ |++.+
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV-----FENkd 126 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV-----FENKD 126 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh-----hcCCc
Confidence 45899999999999999999999889999999999754433 33457899999999999999999999 67778
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
...+||||..+|.|++|+.+. +.+++.++.++++||+.|+.|.|.+ ++||||+|.+|||+|.++++||+||
T Consensus 127 KIvivMEYaS~GeLYDYiSer------~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADF 197 (668)
T KOG0611|consen 127 KIVIVMEYASGGELYDYISER------GSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADF 197 (668)
T ss_pred eEEEEEEecCCccHHHHHHHh------ccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeecc
Confidence 999999999999999999987 6899999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCC-CcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDM-SATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
|++.++.. ......++|++-|.+||++.+.+| ++.+|-||+|+++|.++.|..||+....
T Consensus 198 GLSNly~~---------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh---------- 258 (668)
T KOG0611|consen 198 GLSNLYAD---------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH---------- 258 (668)
T ss_pred chhhhhcc---------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH----------
Confidence 99987643 233567899999999999999988 5689999999999999999999987421
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
..++++.-...+.+ + +. +....-+|++|+..+|++|.|+.+|....
T Consensus 259 -------k~lvrQIs~GaYrE---------P--~~----PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 259 -------KRLVRQISRGAYRE---------P--ET----PSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred -------HHHHHHhhcccccC---------C--CC----CchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 11222111111100 0 00 22245688899999999999999988654
No 41
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-38 Score=328.86 Aligned_cols=282 Identities=25% Similarity=0.347 Sum_probs=211.5
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhc--CCCCccceEEEEeecCCccccceE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRN--IRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
...+..+.||+|+||.||+|+.. ++.||||++.... .+.|.+|.++++. ++|+||++++++-...+.. ...+
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~~ey 283 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-RMEY 283 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc--CceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCcc-ccce
Confidence 34556789999999999999995 5899999997443 4678888888876 4899999999985443222 5589
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC------CCCeeecCCCCCceEecCCCceE
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHC------HPPIVHGDLKPSNVLLDHDMVAH 850 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~k 850 (1013)
++|+||.+.|+|.+|+..+ .++|.+..+|+..+++||+|||+.. +|+|+|||||++||||..|+++.
T Consensus 284 wLVt~fh~kGsL~dyL~~n-------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKAN-------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred eEEeeeccCCcHHHHHHhc-------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 9999999999999999986 7899999999999999999999654 57899999999999999999999
Q ss_pred EccccccccCCCCCCCccccCCCCCcccccccccccccccCCCC------CCcccchHHHHHHHHHHHhCCCCCCC--cC
Q 001782 851 VGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGD------MSATGDVYSFGILLLEMFTRRRPTDN--MF 922 (1013)
Q Consensus 851 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DIwSlG~il~ell~G~~pf~~--~~ 922 (1013)
|+|||+|..+.++.+.. .....+||.+|||||++.+.. .-.+.||||+|.|+|||+++-.-++. ..
T Consensus 357 IaDFGLAl~~~p~~~~~------d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp 430 (534)
T KOG3653|consen 357 IADFGLALRLEPGKPQG------DTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVP 430 (534)
T ss_pred eeccceeEEecCCCCCc------chhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCC
Confidence 99999999887654332 234578999999999988752 22368999999999999997654431 11
Q ss_pred CCCccHHHHHHhh-CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 923 NDGLTLHEFAKMA-LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 923 ~~~~~~~~~~~~~-~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
+-...+...+... --++.++.+- ....||......+.- ..+..+.+.+..||+.||+.|-|+.=|.+++
T Consensus 431 ~Yqlpfe~evG~hPt~e~mq~~VV-----~kK~RP~~p~~W~~h-----~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~ 500 (534)
T KOG3653|consen 431 EYQLPFEAEVGNHPTLEEMQELVV-----RKKQRPKIPDAWRKH-----AGMAVLCETIEECWDHDAEARLTAGCVEERM 500 (534)
T ss_pred cccCchhHHhcCCCCHHHHHHHHH-----hhccCCCChhhhhcC-----ccHHHHHHHHHHHcCCchhhhhhhHHHHHHH
Confidence 1112222111111 1122222221 112344333322221 3356688899999999999999999999999
Q ss_pred HHhhhhhh
Q 001782 1002 CSARKIFL 1009 (1013)
Q Consensus 1002 ~~~~~~~~ 1009 (1013)
.++.....
T Consensus 501 ~~l~~~~~ 508 (534)
T KOG3653|consen 501 AELMMLWE 508 (534)
T ss_pred HHHhccCC
Confidence 99876554
No 42
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=332.09 Aligned_cols=263 Identities=25% Similarity=0.362 Sum_probs=203.3
Q ss_pred hhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--------------cchhHHHHHHHHHhcCCCCccce
Q 001782 695 SKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--------------GATKSFVAECEALRNIRHRNLIK 760 (1013)
Q Consensus 695 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~ 760 (1013)
.+..++|++.+.||+|.||.|-+|++..+++.||||++..... ...+...+|+.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 4557899999999999999999999999999999999963211 12357899999999999999999
Q ss_pred EEEEeecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCc
Q 001782 761 IITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSN 840 (1013)
Q Consensus 761 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~N 840 (1013)
++++..+ ...+..|+|+|||..|.+...=... ..+++.++++++.+++.||+|||.+ |||||||||+|
T Consensus 173 LiEvLDD---P~s~~~YlVley~s~G~v~w~p~d~------~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsN 240 (576)
T KOG0585|consen 173 LIEVLDD---PESDKLYLVLEYCSKGEVKWCPPDK------PELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSN 240 (576)
T ss_pred EEEeecC---cccCceEEEEEeccCCccccCCCCc------ccccHHHHHHHHHHHHHHHHHHHhc---Ceeccccchhh
Confidence 9999653 3557899999999988775432221 2389999999999999999999999 99999999999
Q ss_pred eEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCC----CCcccchHHHHHHHHHHHhCCC
Q 001782 841 VLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGD----MSATGDVYSFGILLLEMFTRRR 916 (1013)
Q Consensus 841 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DIwSlG~il~ell~G~~ 916 (1013)
+|++++|++||+|||.+.......... .........||+.|+|||...++. .+.+.||||+||++|.|+.|+.
T Consensus 241 LLl~~~g~VKIsDFGVs~~~~~~~~~~---~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~ 317 (576)
T KOG0585|consen 241 LLLSSDGTVKISDFGVSNEFPQGSDEG---SDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQL 317 (576)
T ss_pred eEEcCCCcEEeeccceeeecccCCccc---cHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccC
Confidence 999999999999999998764432221 122234578999999999987743 3567899999999999999999
Q ss_pred CCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 001782 917 PTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTD 996 (1013)
Q Consensus 917 pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 996 (1013)
||.+.. ..+..++... +|- .++...+..+.+.+++.++|..||.+|.+..+
T Consensus 318 PF~~~~-----------------~~~l~~KIvn-~pL-----------~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ 368 (576)
T KOG0585|consen 318 PFFDDF-----------------ELELFDKIVN-DPL-----------EFPENPEINEDLKDLIKRLLEKDPEQRITLPD 368 (576)
T ss_pred Ccccch-----------------HHHHHHHHhc-Ccc-----------cCCCcccccHHHHHHHHHHhhcChhheeehhh
Confidence 997521 1111111110 000 01111133456788999999999999999999
Q ss_pred HHHHH
Q 001782 997 VVAKL 1001 (1013)
Q Consensus 997 vl~~L 1001 (1013)
|....
T Consensus 369 ik~Hp 373 (576)
T KOG0585|consen 369 IKLHP 373 (576)
T ss_pred heecc
Confidence 86543
No 43
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1e-37 Score=334.74 Aligned_cols=212 Identities=23% Similarity=0.369 Sum_probs=182.1
Q ss_pred hhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccc
Q 001782 696 KATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 696 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 772 (1013)
...++|++.++||+|+||.||+|+-+.+|..+|+|+++... ....+.+..|..+|....+|.||+++-. |++
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs-----FQD 212 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS-----FQD 212 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE-----ecC
Confidence 35678999999999999999999999999999999998543 3445678899999999999999999988 577
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
.++.|+||||++||++..++... +.+++..+..++.+++.|++.+|+. |+|||||||+|+|||..|++||+
T Consensus 213 ~~~LYLiMEylPGGD~mTLL~~~------~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLS 283 (550)
T KOG0605|consen 213 KEYLYLIMEYLPGGDMMTLLMRK------DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLS 283 (550)
T ss_pred CCeeEEEEEecCCccHHHHHHhc------CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeec
Confidence 79999999999999999999887 6899999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCc----------------cccCC-----------------------CCCcccccccccccccccCCC
Q 001782 853 DFGLARFLPPCSPAT----------------ILETP-----------------------SSSTGIKGTVGYVAPEYGMGG 893 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~----------------~~~~~-----------------------~~~~~~~gt~~y~aPE~~~~~ 893 (1013)
|||++.-+....... ..+.. ......+|||.|||||++.+.
T Consensus 284 DFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~k 363 (550)
T KOG0605|consen 284 DFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGK 363 (550)
T ss_pred cccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcC
Confidence 999985332100000 00000 012345699999999999999
Q ss_pred CCCcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 894 DMSATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 894 ~~~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
.|+..+|.||+|||+|||+.|.+||...
T Consensus 364 gY~~~cDwWSLG~ImyEmLvGyPPF~s~ 391 (550)
T KOG0605|consen 364 GYGKECDWWSLGCIMYEMLVGYPPFCSE 391 (550)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999999864
No 44
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.9e-38 Score=323.88 Aligned_cols=286 Identities=21% Similarity=0.317 Sum_probs=210.2
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCc-cceEEEEeecCC-cccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRN-LIKIITVCSSID-FEEV 773 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~-~~~~ 773 (1013)
...|...++||+|+||+||+|+...+|+.||+|.++.... .......+|+.+++.++|+| |+++++++.... +...
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 3456777889999999999999999999999999986544 34566789999999999999 999999986432 1223
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++|+||++ .+|.++++...... ..++...+..++.||+.||+|+|++ +|+||||||+||+|+++|.+||+|
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaD 163 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLAD 163 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeec
Confidence 47889999999 89999998864311 3567789999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
||+|+.+... .......++|.+|+|||++.+. .|+...||||+||++.||++++..|.+..+.+. ...+.
T Consensus 164 FGlAra~~ip--------~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~q-l~~If 234 (323)
T KOG0594|consen 164 FGLARAFSIP--------MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQ-LFRIF 234 (323)
T ss_pred cchHHHhcCC--------cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHH-HHHHH
Confidence 9999855321 1224567789999999999887 789999999999999999999999987544222 22222
Q ss_pred Hh-hCChh-HHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 933 KM-ALPEK-VMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 933 ~~-~~~~~-~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
+. ..|.+ ...-+...-..++ ........+.-............+++.+|++++|++|.|++.++++
T Consensus 235 ~~lGtP~e~~Wp~v~~~~~~k~--~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 235 RLLGTPNEKDWPGVSSLPDYKA--PFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred HHcCCCCccCCCCccccccccc--cCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 21 11111 0000000000000 0000000011111111112457889999999999999999999886
No 45
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=7.2e-37 Score=333.61 Aligned_cols=251 Identities=19% Similarity=0.288 Sum_probs=199.4
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeeccccc---hhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEe
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGA---TKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
..||+|+++.||+|++ +++.||||+++...... .+.+.+|+.++++++||||+++++++... .......++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~-~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI-VDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec-ccCCCceEEEEE
Confidence 6799999999999998 57899999997543322 46678999999999999999999997541 123457899999
Q ss_pred eccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCC
Q 001782 782 YMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLP 861 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 861 (1013)
|+++|+|.+++... ..+++..+.+++.|++.|++|||+.. +++||||||+||++++++.+||+|||+++.+.
T Consensus 103 y~~~g~L~~~l~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~ 174 (283)
T PHA02988 103 YCTRGYLREVLDKE------KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILS 174 (283)
T ss_pred eCCCCcHHHHHhhC------CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhc
Confidence 99999999999865 46889999999999999999999832 78899999999999999999999999987543
Q ss_pred CCCCCccccCCCCCcccccccccccccccCC--CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChh
Q 001782 862 PCSPATILETPSSSTGIKGTVGYVAPEYGMG--GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEK 939 (1013)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~ 939 (1013)
.. .....|+..|+|||++.+ ..++.++|||||||++|||++|+.||...... ...
T Consensus 175 ~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~-----~~~------- 231 (283)
T PHA02988 175 SP-----------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK-----EIY------- 231 (283)
T ss_pred cc-----------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH-----HHH-------
Confidence 21 123457899999999876 68999999999999999999999999753211 100
Q ss_pred HHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhh
Q 001782 940 VMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARK 1006 (1013)
Q Consensus 940 ~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1006 (1013)
..++. ..+ ++.. ...++..+.+++.+||+.||++|||++|+++.|+.++.
T Consensus 232 -~~i~~----~~~--~~~~----------~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 232 -DLIIN----KNN--SLKL----------PLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred -HHHHh----cCC--CCCC----------CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 00100 000 0000 01235568899999999999999999999999998764
No 46
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.3e-37 Score=338.18 Aligned_cols=275 Identities=21% Similarity=0.294 Sum_probs=203.5
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++ ...+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF-----RRRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE-----ecCCEE
Confidence 47999999999999999999999999999999987432 22345688999999999999999999985 345789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||++++.+..+.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMP------NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred EEEEecCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 9999999987666554332 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh--
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM-- 934 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~-- 934 (1013)
+........ .......|++.|+|||++.+..++.++||||+||++|||++|+.||......+ ........
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~ 218 (287)
T cd07848 147 ARNLSEGSN-------ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFTIQKVLG 218 (287)
T ss_pred ccccccccc-------ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhC
Confidence 986532211 11234568999999999999899999999999999999999999997632211 11111111
Q ss_pred hCChhHHHhhhhhhccchhhh----hccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEAR----ASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..+....... ..++..+ +................+..+.+++.+|++.||++|||++|+++
T Consensus 219 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 219 PLPAEQMKLF----YSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred CCCHHHHHhh----hccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1111111111 0111100 00000000011111224567899999999999999999999875
No 47
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=344.19 Aligned_cols=266 Identities=26% Similarity=0.399 Sum_probs=209.1
Q ss_pred hhhhhccCCCCCceeeccceEEEEEEECCCC----eEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEee
Q 001782 694 LSKATNDFSSSNMIGQGSFGFVYRGNLGENE----MAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCS 766 (1013)
Q Consensus 694 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 766 (1013)
++..-++....++||+|+||.||+|+....+ ..||||..+... .....++.+|+++|+.++||||+++||++.
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 3334455666799999999999999985432 238999988532 445678999999999999999999999975
Q ss_pred cCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC
Q 001782 767 SIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD 846 (1013)
Q Consensus 767 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 846 (1013)
. ....++|||+|.||+|.++++... ..++..++.+++.+.|.||+|||++ +++||||.++|+|++.+
T Consensus 232 ~-----~~Pl~ivmEl~~gGsL~~~L~k~~-----~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~ 298 (474)
T KOG0194|consen 232 L-----EEPLMLVMELCNGGSLDDYLKKNK-----KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKK 298 (474)
T ss_pred C-----CCccEEEEEecCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCC
Confidence 3 377899999999999999999874 2589999999999999999999999 99999999999999999
Q ss_pred CceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCC
Q 001782 847 MVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDG 925 (1013)
Q Consensus 847 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~ 925 (1013)
+.+||+|||+++.-.. ... ......-+..|+|||.+..+.++.++|||||||++||+++ |..||......
T Consensus 299 ~~vKISDFGLs~~~~~---~~~-----~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~- 369 (474)
T KOG0194|consen 299 GVVKISDFGLSRAGSQ---YVM-----KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY- 369 (474)
T ss_pred CeEEeCccccccCCcc---eee-----ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-
Confidence 9999999999874321 110 0112235689999999999999999999999999999999 89999875322
Q ss_pred ccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhh
Q 001782 926 LTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSAR 1005 (1013)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1005 (1013)
.+...+ ...++... .....+..+..++.+||..+|++||++.++.+.++.+.
T Consensus 370 -------------~v~~kI---~~~~~r~~------------~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~ 421 (474)
T KOG0194|consen 370 -------------EVKAKI---VKNGYRMP------------IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALE 421 (474)
T ss_pred -------------HHHHHH---HhcCccCC------------CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHH
Confidence 111111 00000000 00133566788888999999999999999999999987
Q ss_pred hhhh
Q 001782 1006 KIFL 1009 (1013)
Q Consensus 1006 ~~~~ 1009 (1013)
+...
T Consensus 422 ~~~~ 425 (474)
T KOG0194|consen 422 KKKE 425 (474)
T ss_pred hccc
Confidence 7654
No 48
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=333.96 Aligned_cols=266 Identities=23% Similarity=0.374 Sum_probs=212.5
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc-chhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG-ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
+.....+.++||+|-||.|.+++.. ....||||.++..+.. ...+|.+|+++|.+++||||++++|+|.. ++.
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~-----DeP 609 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ-----DDP 609 (807)
T ss_pred chhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec-----CCc
Confidence 3456678899999999999999986 3689999999866543 45789999999999999999999999964 377
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++|+|||++|+|.+|+..+... ........+|+.|||.|++||.+. ++||||+.++|+|+|+++++||+|||
T Consensus 610 icmI~EYmEnGDLnqFl~aheap----t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfg 682 (807)
T KOG1094|consen 610 LCMITEYMENGDLNQFLSAHELP----TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFG 682 (807)
T ss_pred hHHHHHHHhcCcHHHHHHhccCc----ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcc
Confidence 89999999999999999887432 244556778999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh--CCCCCCCcCCCCccHHHHHH
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT--RRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~--G~~pf~~~~~~~~~~~~~~~ 933 (1013)
+++-+..++.... ....+-+.+|||||.+.-++++.++|||+||+++||+++ ...||....+++.
T Consensus 683 msR~lysg~yy~v------qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v------- 749 (807)
T KOG1094|consen 683 MSRNLYSGDYYRV------QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV------- 749 (807)
T ss_pred cccccccCCceee------ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH-------
Confidence 9996544443332 345567899999999999999999999999999999876 8889876533211
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
-+...++.+.--....-.|| .-|+.++++++.+||+.|.++||+++++...|++.
T Consensus 750 ---ven~~~~~~~~~~~~~l~~P-------------~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 750 ---VENAGEFFRDQGRQVVLSRP-------------PACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ---HHhhhhhcCCCCcceeccCC-------------CcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11122222111111111222 34567899999999999999999999999988764
No 49
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=334.99 Aligned_cols=262 Identities=26% Similarity=0.414 Sum_probs=217.7
Q ss_pred hhhhhccCCCCCceeeccceEEEEEEEC----CCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecC
Q 001782 694 LSKATNDFSSSNMIGQGSFGFVYRGNLG----ENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSI 768 (1013)
Q Consensus 694 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 768 (1013)
++...+.....++||+|-||.||+|.+. +....||||..+.+. .+..+.|..|..+|+.++||||++++|+|.+
T Consensus 384 yel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e- 462 (974)
T KOG4257|consen 384 YELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE- 462 (974)
T ss_pred ceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-
Confidence 3334455566789999999999999873 334679999987543 3456789999999999999999999999853
Q ss_pred CccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCc
Q 001782 769 DFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMV 848 (1013)
Q Consensus 769 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 848 (1013)
...|+|||.++.|.|..|++..++ .++......++.||+.||+|||+. .+|||||.++||||.....
T Consensus 463 -----~P~WivmEL~~~GELr~yLq~nk~-----sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~C 529 (974)
T KOG4257|consen 463 -----QPMWIVMELAPLGELREYLQQNKD-----SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQC 529 (974)
T ss_pred -----cceeEEEecccchhHHHHHHhccc-----cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcce
Confidence 568999999999999999998764 688889999999999999999999 9999999999999999999
Q ss_pred eEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCcc
Q 001782 849 AHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLT 927 (1013)
Q Consensus 849 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~ 927 (1013)
+|++|||+++.+.++..... ....-+..|||||.+...+++.++|||.|||++||++. |..||+...+.+..
T Consensus 530 VKLaDFGLSR~~ed~~yYka-------S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI 602 (974)
T KOG4257|consen 530 VKLADFGLSRYLEDDAYYKA-------SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI 602 (974)
T ss_pred eeecccchhhhccccchhhc-------cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE
Confidence 99999999998876544332 23335689999999999999999999999999999997 99999986555332
Q ss_pred HHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhh
Q 001782 928 LHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARK 1006 (1013)
Q Consensus 928 ~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1006 (1013)
.. ..-.+| ++.+..|++.++.++.+||++||.+||.+.|+.+.|+++.+
T Consensus 603 ~~--------------------iEnGeR----------lP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 603 GH--------------------IENGER----------LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred EE--------------------ecCCCC----------CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 11 111122 22335788899999999999999999999999999999876
No 50
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=5e-37 Score=345.36 Aligned_cols=275 Identities=21% Similarity=0.254 Sum_probs=203.4
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.++||+|+||.||+|++..++..||||++.... .....++.+|++++++++||||+++++++...........+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5888999999999999999999899999999986322 22345688999999999999999999987654444445689
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||++ ++|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 81 VVFELME-SDLHQVIKAN------DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred EEEecCC-CCHHHHHHhc------ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccc
Confidence 9999997 7899988765 4689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCC--CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG--GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
+......... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..........
T Consensus 151 ~~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~-~~~~~~~~~~ 224 (338)
T cd07859 151 RVAFNDTPTA-----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV-HQLDLITDLL 224 (338)
T ss_pred cccccccCcc-----ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHHHh
Confidence 7543221111 11234578999999999876 67899999999999999999999999753211 0111111000
Q ss_pred --CChh---------HHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 936 --LPEK---------VMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 936 --~~~~---------~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.+.. ..+.+..+....+ .............+.+++.+||+.||++|||++|+++.
T Consensus 225 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 225 GTPSPETISRVRNEKARRYLSSMRKKQP----------VPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred CCCCHHHHHHhhhhhHHHHHHhhcccCC----------CchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0011 1111111100000 00001111234567899999999999999999999864
No 51
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=343.48 Aligned_cols=239 Identities=25% Similarity=0.395 Sum_probs=198.3
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec---cccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK---QRGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 772 (1013)
..++|...++||+|.||.|++|..+.+++.+|||+++.. .+++.+..+.|.+++... +||.+++++.. |+.
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~-----fQT 440 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC-----FQT 440 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc-----ccc
Confidence 356899999999999999999999999999999999844 455677889999998887 59999999998 667
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
.++.|+||||+.||++..+.+. +.+++..+..++..|+.||+|||++ ||||||||.+|||+|.+|++||+
T Consensus 441 ~~~l~fvmey~~Ggdm~~~~~~-------~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiA 510 (694)
T KOG0694|consen 441 KEHLFFVMEYVAGGDLMHHIHT-------DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIA 510 (694)
T ss_pred CCeEEEEEEecCCCcEEEEEec-------ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEec
Confidence 7999999999999995444433 4799999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
|||+++.. +........++||+.|||||++.+..|+.++|.|||||++|||+.|..||... +++.....+.
T Consensus 511 DFGlcKe~--------m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd-dEee~FdsI~ 581 (694)
T KOG0694|consen 511 DFGLCKEG--------MGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD-DEEEVFDSIV 581 (694)
T ss_pred cccccccc--------CCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHh
Confidence 99999842 22344577899999999999999999999999999999999999999999863 2222333332
Q ss_pred Hhh------CChhHHHhhhhhhccchhhhhccC
Q 001782 933 KMA------LPEKVMEIVDPLLLLDLEARASNC 959 (1013)
Q Consensus 933 ~~~------~~~~~~~~i~~~l~~~~~~R~~~~ 959 (1013)
... .+.++..++++++..+|++|....
T Consensus 582 ~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~ 614 (694)
T KOG0694|consen 582 NDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSG 614 (694)
T ss_pred cCCCCCCCcccHHHHHHHHHHhccCcccccCCC
Confidence 221 234556666666666666666553
No 52
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.7e-38 Score=301.80 Aligned_cols=251 Identities=23% Similarity=0.347 Sum_probs=211.1
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
..++|++.+.||+|.||.||.|+.++++-.||+|++...+ ....+++.+|+++-..++||||+++|+++ .+.
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f-----hd~ 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF-----HDS 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe-----ecc
Confidence 3568999999999999999999999999999999997443 23456789999999999999999999994 566
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...|+++||..+|.+...+...+. .++++.....+..|+|.|+.|+|.. +|+||||||+|+|++.++..||+|
T Consensus 95 ~riyLilEya~~gel~k~L~~~~~----~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAd 167 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGRM----KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIAD 167 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhccc----ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccC
Confidence 889999999999999999986543 5789999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||.+..- ...+....+||..|.|||+..+..++..+|+|++|++.||++.|.+||.... .+..+.++..
T Consensus 168 fGwsV~~----------p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k 236 (281)
T KOG0580|consen 168 FGWSVHA----------PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRK 236 (281)
T ss_pred CCceeec----------CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHH
Confidence 9998532 2344667899999999999999999999999999999999999999998743 2222222221
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.. ..+| ........+++.+|+..+|.+|.+..||++.
T Consensus 237 ~~-------------~~~p-----------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 237 VD-------------LKFP-----------------STISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred cc-------------ccCC-----------------cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 11 1111 1223456789999999999999999999875
No 53
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1e-36 Score=334.93 Aligned_cols=279 Identities=21% Similarity=0.311 Sum_probs=201.8
Q ss_pred ccCCCCCceeeccceEEEEEEECC-CCeEEEEEEEeeccc--cchhHHHHHHHHHhcC---CCCccceEEEEeecCCccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGE-NEMAVAVKVMNLKQR--GATKSFVAECEALRNI---RHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~ 772 (1013)
++|++.+.||+|+||.||+|++.. +++.||+|+++.... .....+.+|+.+++.+ +||||++++++|.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 479999999999999999999854 468899999874432 2234566787777765 6999999999986544445
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
....++||||++ ++|.+++..... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEc
Confidence 667899999998 799999876532 4589999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......
T Consensus 153 Dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-~~~~~i~ 222 (290)
T cd07862 153 DFGLARIYSFQ---------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKIL 222 (290)
T ss_pred cccceEeccCC---------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHH
Confidence 99999754321 1233456899999999999889999999999999999999999999764221 1111111
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHH-HHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAK-IEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.....+...++.. ... .+.... .......... .......+.+++.+|++.||++|||+.|+++
T Consensus 223 ~~~~~~~~~~~~~-~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 223 DVIGLPGEEDWPR-DVA-LPRQAF--HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHhCCCChhhchh-hhc-ccchhc--cCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 1110000000000 000 000000 0000000111 1123456789999999999999999999985
No 54
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=8e-37 Score=334.85 Aligned_cols=277 Identities=21% Similarity=0.305 Sum_probs=200.3
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.++|++.++||+|+||.||+|++..++..||+|+++.... .....+.+|+.++++++||||+++++++ ..+...
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~ 78 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII-----HTERCL 78 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEE-----cCCCeE
Confidence 3579999999999999999999999999999999874432 2345678999999999999999999985 345678
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||++ ++|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~ 149 (288)
T cd07871 79 TLVFEYLD-SDLKQYLDNCG-----NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGL 149 (288)
T ss_pred EEEEeCCC-cCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcc
Confidence 99999998 59999887542 3578899999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
++..... ........+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .........
T Consensus 150 ~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~ 220 (288)
T cd07871 150 ARAKSVP--------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFRLL 220 (288)
T ss_pred eeeccCC--------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh
Confidence 8753221 111234567899999998865 568999999999999999999999997532211 111111110
Q ss_pred CChhHHHhhhhhhccchhhhhccCCC--CchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGS--HRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.....+....... ..+-+...... ................+++.+|++.||++|||++|+++
T Consensus 221 -~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 221 -GTPTEETWPGITS-NEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred -CCCChHHhhcccc-chhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000000000 00000000000 00000011122345789999999999999999999975
No 55
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.8e-38 Score=337.73 Aligned_cols=252 Identities=24% Similarity=0.355 Sum_probs=210.8
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce-
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF- 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~- 775 (1013)
++|..++++|+|+||.++.++++.+++.||+|.+..... ...+...+|+.++++++|||||.+.+.+ .+++.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~-----~~~~~~ 78 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSF-----EEDGQL 78 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccch-----hcCCce
Confidence 578999999999999999999999999999999985543 2334678999999999999999999984 44444
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.+|||+||+||++.+.+.+++. ..++++++.+|+.|++.|+.|||++ .|+|||||+.||+++.++.|||+|||
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~~k~----~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfG 151 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKEQKG----VLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFG 151 (426)
T ss_pred EEEEEeecCCCCHHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchh
Confidence 9999999999999999998863 5799999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
+|+.+.+.. .......||+.||.||.+.+.+|..|+|||||||++|||++-+++|....-...
T Consensus 152 laK~l~~~~--------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L--------- 214 (426)
T KOG0589|consen 152 LAKILNPED--------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL--------- 214 (426)
T ss_pred hhhhcCCch--------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH---------
Confidence 999876533 124567899999999999999999999999999999999999999976321111
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
...+........| .....++..++..|++.+|..||++.+++.+
T Consensus 215 ----i~ki~~~~~~Plp-----------------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 215 ----ILKINRGLYSPLP-----------------SMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ----HHHHhhccCCCCC-----------------ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1111111111111 2234568889999999999999999999987
No 56
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.6e-37 Score=337.95 Aligned_cols=246 Identities=26% Similarity=0.328 Sum_probs=198.9
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++ .+...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE-----HDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh-----ccCCe
Confidence 478999999999999999999998999999999874321 2345688999999999999999999874 45578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++++|.+++... +.+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNS------GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecC
Confidence 99999999999999999765 4688999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
+++.... ......|++.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 147 ~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-----~~---- 206 (291)
T cd05612 147 FAKKLRD-----------RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-----GI---- 206 (291)
T ss_pred cchhccC-----------CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HH----
Confidence 9875421 122346899999999999999999999999999999999999999753110 00
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCC-----HHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQ-----MTDVVAK 1000 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 1000 (1013)
...+....... | ......+.+++.+|++.||.+||+ ++|+++.
T Consensus 207 ----~~~i~~~~~~~-~-----------------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 207 ----YEKILAGKLEF-P-----------------RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ----HHHHHhCCcCC-C-----------------ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 01111100000 0 011345678999999999999995 8887654
No 57
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=9.7e-37 Score=336.97 Aligned_cols=277 Identities=20% Similarity=0.311 Sum_probs=200.5
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.++|++.++||+|+||.||+|++..+++.||+|++..... .....+.+|+.+++.++||||+++++++. .....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIH-----TKETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEe-----cCCeE
Confidence 4689999999999999999999998999999999874432 22346788999999999999999999954 45789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||++ +++.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 149 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDKHP-----GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGL 149 (303)
T ss_pred EEEEECCC-cCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCc
Confidence 99999997 78888876542 4688899999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
++..... ........+++.|+|||++.+ ..++.++||||+||++|||++|..||....+............
T Consensus 150 ~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 221 (303)
T cd07869 150 ARAKSVP--------SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVL 221 (303)
T ss_pred ceeccCC--------CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh
Confidence 8743211 111234567899999999865 4578899999999999999999999986432222222111111
Q ss_pred CChhHHHh--hhhhhccchhhhhccCCCCchhHHHH---HHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 936 LPEKVMEI--VDPLLLLDLEARASNCGSHRTEIAKI---EECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 936 ~~~~~~~~--i~~~l~~~~~~R~~~~~~~~~~~~~~---~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.......+ ....-...++ +.... ........ ......+.+++.+|++.||++|||+.|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 222 GTPNEDTWPGVHSLPHFKPE-RFTLY--SPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred CCCChhhccchhhccccccc-ccccc--CCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000000 0000000000 00000 00000000 011245778999999999999999999985
No 58
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=7.7e-37 Score=334.40 Aligned_cols=252 Identities=25% Similarity=0.329 Sum_probs=198.6
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.|+..+.||+|+||.||+|.+..+++.||+|++.... ......+.+|++++++++|++|+++++++ .+.+..
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEE-----ccCCeE
Confidence 3677899999999999999999899999999987432 22234578899999999999999999985 345789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+++|+|.+++..... ..+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~ 148 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMGN----PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGL 148 (285)
T ss_pred EEEEEecCCCcHHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCC
Confidence 999999999999988865422 3689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+....... ......||..|+|||++.+..++.++||||+||++|||++|+.||........ ...
T Consensus 149 ~~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~~~------ 212 (285)
T cd05631 149 AVQIPEGE---------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-REE------ 212 (285)
T ss_pred cEEcCCCC---------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-HHH------
Confidence 97643211 12345689999999999999999999999999999999999999976322110 000
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCC-----HHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQ-----MTDVVA 999 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 999 (1013)
+.......... .....+..+.+++.+||+.||++||+ ++|+++
T Consensus 213 -------~~~~~~~~~~~-------------~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 213 -------VDRRVKEDQEE-------------YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred -------HHHHhhccccc-------------CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 00000000000 00112345788999999999999997 788776
No 59
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.3e-36 Score=339.76 Aligned_cols=200 Identities=24% Similarity=0.358 Sum_probs=175.5
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.++|++.+.||+|+||.||+|++..++..||+|++..... ...+.+.+|++++++++||||+++++++. .++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----ECCEE
Confidence 4689999999999999999999999999999999975432 23457899999999999999999999964 44678
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+++++|.+++... ..+++..+..++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEA------KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred EEEeecCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 9999999999999999765 46889999999999999999999852 699999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
+...... ......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 151 ~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 151 SGQLIDS----------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ccccccc----------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 8754321 12345689999999999999999999999999999999999999965
No 60
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-36 Score=344.58 Aligned_cols=273 Identities=21% Similarity=0.264 Sum_probs=203.5
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
..+|++.+.||+|+||.||+|.+..+++.||+|... ...+.+|++++++++||||+++++++. .....+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~~~ 159 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFT-----YNKFTC 159 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEE-----ECCeeE
Confidence 457999999999999999999999999999999753 245678999999999999999999853 457789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+|+|++. ++|.+++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|
T Consensus 160 lv~e~~~-~~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a 229 (391)
T PHA03212 160 LILPRYK-TDLYCYLAAK------RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAA 229 (391)
T ss_pred EEEecCC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcc
Confidence 9999997 7898888764 4688999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCC------CccHHHH
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFND------GLTLHEF 931 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~------~~~~~~~ 931 (1013)
+...... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......
T Consensus 230 ~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i 302 (391)
T PHA03212 230 CFPVDIN-------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLI 302 (391)
T ss_pred ccccccc-------ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHH
Confidence 7532211 11233467999999999999999999999999999999999999887542211 1111111
Q ss_pred HHhh------CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 932 AKMA------LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 932 ~~~~------~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.... .+......++.... ....+.......++......+.+..+.+++.+|++.||++|||++|+++
T Consensus 303 ~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 303 IRRSGTHPNEFPIDAQANLDEIYI-GLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHhcCChhhcCcchhHHHHHHHH-HHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 1111 01011111110000 0001111111112222333445667899999999999999999999985
No 61
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5e-37 Score=341.91 Aligned_cols=242 Identities=22% Similarity=0.295 Sum_probs=194.3
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEe
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++ ...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EcCCEEEEEEe
Confidence 46999999999999999999999999997432 22345678899999999999999999985 45578999999
Q ss_pred eccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCC
Q 001782 782 YMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLP 861 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 861 (1013)
|+++++|.+++... +.+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 76 YANGGELFFHLSRE------RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccc
Confidence 99999999999765 4689999999999999999999999 99999999999999999999999999987432
Q ss_pred CCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHH
Q 001782 862 PCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVM 941 (1013)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 941 (1013)
. .........||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..
T Consensus 147 ~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-----~~---------- 203 (323)
T cd05571 147 S--------DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KL---------- 203 (323)
T ss_pred c--------CCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH-----HH----------
Confidence 1 111233457999999999999999999999999999999999999999652110 00
Q ss_pred HhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-----CHHHHHH
Q 001782 942 EIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-----QMTDVVA 999 (1013)
Q Consensus 942 ~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 999 (1013)
.......++ .. .......+.+++.+||+.||++|| ++.|+++
T Consensus 204 --~~~~~~~~~----~~----------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 204 --FELILMEEI----RF----------PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred --HHHHHcCCC----CC----------CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 000000000 00 011234577899999999999999 7888875
No 62
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-37 Score=319.56 Aligned_cols=274 Identities=25% Similarity=0.377 Sum_probs=210.4
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcC--CCCccceEEEEeecCCccccce
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNI--RHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
..+.++.+.||+|.||+||+|+++ |+.||||++...+ .+.+.+|.++++.+ +|+||+.+++.-... -..-..
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~-~gs~TQ 283 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKD-NGSWTQ 283 (513)
T ss_pred hheeEEEEEecCccccceeecccc--CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccC-CCceEE
Confidence 456778899999999999999997 6679999996433 36678888888864 999999999874321 122246
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhh-----cCCCCeeecCCCCCceEecCCCceE
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHH-----HCHPPIVHGDLKPSNVLLDHDMVAH 850 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-----~~~~~ivH~Dlkp~NIll~~~~~~k 850 (1013)
.|+|++|.+.|||.||+... .++....++++..+|.||+|||. +.+|.|.|||||+.||||..++.+.
T Consensus 284 LwLvTdYHe~GSL~DyL~r~-------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~ 356 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRN-------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 356 (513)
T ss_pred EEEeeecccCCcHHHHHhhc-------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence 89999999999999999885 68899999999999999999995 3468999999999999999999999
Q ss_pred EccccccccCCCCCCCccccCCCCCcccccccccccccccCCCC------CCcccchHHHHHHHHHHHhC----------
Q 001782 851 VGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGD------MSATGDVYSFGILLLEMFTR---------- 914 (1013)
Q Consensus 851 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DIwSlG~il~ell~G---------- 914 (1013)
|+|+|+|-....... .-.......+||.+|||||++.... .-..+||||||.|+||+..+
T Consensus 357 IADLGLAv~h~~~t~----~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey 432 (513)
T KOG2052|consen 357 IADLGLAVRHDSDTD----TIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEY 432 (513)
T ss_pred EeeceeeEEecccCC----cccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhh
Confidence 999999987655431 1223356788999999999987642 23469999999999999864
Q ss_pred CCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCH
Q 001782 915 RRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQM 994 (1013)
Q Consensus 915 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 994 (1013)
+.||.+..+.+..+.++.+...-+.. ||+..... +..++...+.++|+.||..+|..|-||
T Consensus 433 ~~Pyyd~Vp~DPs~eeMrkVVCv~~~--------------RP~ipnrW-----~s~~~l~~m~klMkeCW~~Np~aRltA 493 (513)
T KOG2052|consen 433 QLPYYDVVPSDPSFEEMRKVVCVQKL--------------RPNIPNRW-----KSDPALRVMAKLMKECWYANPAARLTA 493 (513)
T ss_pred cCCcccCCCCCCCHHHHhcceeeccc--------------CCCCCccc-----ccCHHHHHHHHHHHHhhcCCchhhhHH
Confidence 35666655555444443332221111 22211111 113456788999999999999999999
Q ss_pred HHHHHHHHHhhhh
Q 001782 995 TDVVAKLCSARKI 1007 (1013)
Q Consensus 995 ~evl~~L~~~~~~ 1007 (1013)
-.+-+.|.++.+.
T Consensus 494 LriKKtl~~l~~~ 506 (513)
T KOG2052|consen 494 LRIKKTLAKLSNS 506 (513)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999988753
No 63
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.1e-36 Score=345.47 Aligned_cols=265 Identities=25% Similarity=0.370 Sum_probs=203.6
Q ss_pred hhccCCCCCceeeccceEEEEEEE-----CCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcC-CCCccceEEEEeecCC
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNL-----GENEMAVAVKVMNLKQ-RGATKSFVAECEALRNI-RHRNLIKIITVCSSID 769 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 769 (1013)
..++|++.++||+|+||.||+|++ ..++..||+|+++... ....+.+.+|+.+++.+ +||||++++++|.
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~--- 109 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACT--- 109 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeec---
Confidence 355899999999999999999975 3456789999987433 23345688999999999 8999999999964
Q ss_pred ccccceEEEEEeeccCCCHHHHhhccccc---------------------------------------------------
Q 001782 770 FEEVDFKAIVYEYMECGSLEDWLHQSNDQ--------------------------------------------------- 798 (1013)
Q Consensus 770 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 798 (1013)
.....++||||+++|+|.+++......
T Consensus 110 --~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
T cd05104 110 --VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRR 187 (375)
T ss_pred --cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccc
Confidence 446789999999999999999754210
Q ss_pred ------------------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 799 ------------------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 799 ------------------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
.....+++.++.+++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 264 (375)
T cd05104 188 SVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDI 264 (375)
T ss_pred ccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceec
Confidence 0112578899999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCChh
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALPEK 939 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~~~ 939 (1013)
....... ......++..|+|||++.+..++.++|||||||++|||++ |..||....... .
T Consensus 265 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-------------~ 325 (375)
T cd05104 265 RNDSNYV------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-------------K 325 (375)
T ss_pred cCccccc------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-------------H
Confidence 4322111 1122345678999999999999999999999999999998 888986532211 1
Q ss_pred HHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 940 VMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 940 ~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
....+.... ++... ...+.++.+++.+||+.||++|||+.||++.|++.
T Consensus 326 ~~~~~~~~~------~~~~~----------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 326 FYKMIKEGY------RMLSP----------ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHHHHHhCc------cCCCC----------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 111111100 00000 01134678999999999999999999999999864
No 64
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=9.6e-37 Score=341.56 Aligned_cols=254 Identities=20% Similarity=0.272 Sum_probs=202.6
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.++||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++. ..+.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-----~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ-----DDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE-----cCCE
Confidence 47899999999999999999999889999999997432 223456889999999999999999999853 4578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++++|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNL------GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCc
Confidence 99999999999999999765 4688999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
++..... ......||+.|+|||++.+..++.++|||||||++|||++|..||......+ .....
T Consensus 147 ~a~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~i---- 210 (333)
T cd05600 147 LSKGIVT-----------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE-TWENL---- 210 (333)
T ss_pred CCccccc-----------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH-HHHHH----
Confidence 9975432 2334578999999999999999999999999999999999999997532110 00000
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.... ..+ .++..... .......+.+++.+|+..+|.+||++.|+++.
T Consensus 211 -----~~~~-~~~-----~~~~~~~~-------~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 211 -----KYWK-ETL-----QRPVYDDP-------RFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred -----Hhcc-ccc-----cCCCCCcc-------ccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0000 000 00000000 01234567889999999999999999999864
No 65
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.5e-37 Score=342.34 Aligned_cols=246 Identities=23% Similarity=0.298 Sum_probs=198.4
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++ ..++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSF-----QDEN 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----EcCC
Confidence 467899999999999999999999999999999997432 22345688999999999999999999985 4457
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..++||||+.+++|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Df 162 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKA------GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDF 162 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeec
Confidence 899999999999999999865 4688999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
|+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+
T Consensus 163 g~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~----~~~~--- 224 (329)
T PTZ00263 163 GFAKKVPDR-----------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP----FRIY--- 224 (329)
T ss_pred cCceEcCCC-----------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH----HHHH---
Confidence 999754321 2235689999999999999999999999999999999999999965211 0000
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCC-----HHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQ-----MTDVVA 999 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 999 (1013)
..+... .+ ... ......+.+++.+||+.||.+||+ +++++.
T Consensus 225 ------~~i~~~----~~----~~p----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 225 ------EKILAG----RL----KFP----------NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ------HHHhcC----Cc----CCC----------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 001000 00 000 001234678999999999999986 577664
No 66
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.2e-36 Score=344.89 Aligned_cols=267 Identities=23% Similarity=0.372 Sum_probs=204.2
Q ss_pred hhhccCCCCCceeeccceEEEEEEECC-----CCeEEEEEEEeeccc-cchhHHHHHHHHHhcC-CCCccceEEEEeecC
Q 001782 696 KATNDFSSSNMIGQGSFGFVYRGNLGE-----NEMAVAVKVMNLKQR-GATKSFVAECEALRNI-RHRNLIKIITVCSSI 768 (1013)
Q Consensus 696 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 768 (1013)
...++|++.+.||+|+||.||+|++.. ++..||+|+++.... ...+.+.+|+++++.+ +||||++++++|.
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~-- 112 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT-- 112 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec--
Confidence 345689999999999999999998643 335799999974432 2345688999999999 8999999999964
Q ss_pred CccccceEEEEEeeccCCCHHHHhhccccc--------------------------------------------------
Q 001782 769 DFEEVDFKAIVYEYMECGSLEDWLHQSNDQ-------------------------------------------------- 798 (1013)
Q Consensus 769 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------- 798 (1013)
.....++||||+++|+|.+++......
T Consensus 113 ---~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (374)
T cd05106 113 ---HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSS 189 (374)
T ss_pred ---CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccc
Confidence 446789999999999999998653210
Q ss_pred --------------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCCC
Q 001782 799 --------------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCS 864 (1013)
Q Consensus 799 --------------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 864 (1013)
....++++.++++++.||+.||+|||++ +|+||||||+||++++++.+||+|||+++.+....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~ 266 (374)
T cd05106 190 SSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS 266 (374)
T ss_pred cccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCc
Confidence 0113578899999999999999999999 99999999999999999999999999997653221
Q ss_pred CCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCChhHHHh
Q 001782 865 PATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALPEKVMEI 943 (1013)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1013)
... ......++..|+|||++.+..++.++|||||||++|||++ |+.||........ ....
T Consensus 267 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~-------------~~~~ 327 (374)
T cd05106 267 NYV------VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK-------------FYKM 327 (374)
T ss_pred cee------eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH-------------HHHH
Confidence 110 1122345678999999999999999999999999999997 9999975322110 1111
Q ss_pred hhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhh
Q 001782 944 VDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSAR 1005 (1013)
Q Consensus 944 i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1005 (1013)
+...... ..+ ...+..+.+++.+||+.||++|||+.||++.|+++.
T Consensus 328 ~~~~~~~---~~~-------------~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 328 VKRGYQM---SRP-------------DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHcccCc---cCC-------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 1100000 000 011346788999999999999999999999999864
No 67
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.1e-36 Score=333.23 Aligned_cols=269 Identities=22% Similarity=0.363 Sum_probs=201.0
Q ss_pred hccCCCCCceeeccceEEEEEEECC----------------CCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccce
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGE----------------NEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIK 760 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 760 (1013)
.++|++.++||+|+||.||+|.+.. ++..||+|++..... ....++.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 4689999999999999999998632 345799999875432 23457899999999999999999
Q ss_pred EEEEeecCCccccceEEEEEeeccCCCHHHHhhccccc-------------cccCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 001782 761 IITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQ-------------LEVGNFNVIQRLNLVIDVAFAIEYLHHHC 827 (1013)
Q Consensus 761 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------~~~~~l~~~~~~~i~~qia~~L~~LH~~~ 827 (1013)
+++++. ..+..++||||+++++|.+++...... .....+++.++++++.||+.|++|||+.
T Consensus 84 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~- 157 (304)
T cd05096 84 LLGVCV-----DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL- 157 (304)
T ss_pred EEEEEe-----cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-
Confidence 999964 336789999999999999998654211 1113478889999999999999999999
Q ss_pred CCCeeecCCCCCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHH
Q 001782 828 HPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGIL 907 (1013)
Q Consensus 828 ~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~i 907 (1013)
+|+||||||+||+++.++.+||+|||+++.+....... ......++..|+|||++.++.++.++|||||||+
T Consensus 158 --~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~ 229 (304)
T cd05096 158 --NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYR------IQGRAVLPIRWMAWECILMGKFTTASDVWAFGVT 229 (304)
T ss_pred --CccccCcchhheEEcCCccEEECCCccceecccCceeE------ecCcCCCCccccCHHHHhcCCCCchhhhHHHHHH
Confidence 99999999999999999999999999997653322111 1223446789999999998899999999999999
Q ss_pred HHHHHh--CCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhccc
Q 001782 908 LLEMFT--RRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSM 985 (1013)
Q Consensus 908 l~ell~--G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 985 (1013)
+|||++ +..||....... .... ..+............++ ..++..+.+++.+||+
T Consensus 230 l~el~~~~~~~p~~~~~~~~-~~~~---------~~~~~~~~~~~~~~~~~-------------~~~~~~~~~li~~cl~ 286 (304)
T cd05096 230 LWEILMLCKEQPYGELTDEQ-VIEN---------AGEFFRDQGRQVYLFRP-------------PPCPQGLYELMLQCWS 286 (304)
T ss_pred HHHHHHccCCCCCCcCCHHH-HHHH---------HHHHhhhccccccccCC-------------CCCCHHHHHHHHHHcc
Confidence 999987 567776532110 0000 00100000000000000 1234568899999999
Q ss_pred CCCCCCCCHHHHHHHHHH
Q 001782 986 ESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 986 ~dP~~RPs~~evl~~L~~ 1003 (1013)
.||++|||+.||.+.|++
T Consensus 287 ~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 287 RDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCchhCcCHHHHHHHHhC
Confidence 999999999999988763
No 68
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-37 Score=330.14 Aligned_cols=264 Identities=25% Similarity=0.431 Sum_probs=219.4
Q ss_pred hhhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCcc
Q 001782 692 ADLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFE 771 (1013)
Q Consensus 692 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 771 (1013)
+.++-...+....++||-|-||.||.|.|++....||||.++.+ ....++|.+|+.+|+.++|||+|+++|+|+..
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~E--- 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE--- 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccC---
Confidence 34444556778889999999999999999999999999999743 44578899999999999999999999999643
Q ss_pred ccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEE
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHV 851 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 851 (1013)
...|||+|||.+|+|.+|+++... ..++....+.++.||+.|++||..+ ++||||+.++|+||.++..+|+
T Consensus 336 --pPFYIiTEfM~yGNLLdYLRecnr----~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKv 406 (1157)
T KOG4278|consen 336 --PPFYIITEFMCYGNLLDYLRECNR----SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKV 406 (1157)
T ss_pred --CCeEEEEecccCccHHHHHHHhch----hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEe
Confidence 678999999999999999998754 4677778899999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHH
Q 001782 852 GDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHE 930 (1013)
Q Consensus 852 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~ 930 (1013)
+|||+++++..+.... .....-++.|.|||-+....++.|+|||+|||++|||.| |-.||.... +.+
T Consensus 407 ADFGLsRlMtgDTYTA-------HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-----lSq 474 (1157)
T KOG4278|consen 407 ADFGLSRLMTGDTYTA-------HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQ 474 (1157)
T ss_pred eccchhhhhcCCceec-------ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-----HHH
Confidence 9999999886543221 222334688999999999999999999999999999998 888987631 111
Q ss_pred HHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhh
Q 001782 931 FAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSAR 1005 (1013)
Q Consensus 931 ~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1005 (1013)
+.+++.+. + +.+.++.|+++++++|++||++.|.+||+++|+-+.++.+-
T Consensus 475 ---------VY~LLEkg----y------------RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 475 ---------VYGLLEKG----Y------------RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred ---------HHHHHhcc----c------------cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 12222221 1 12234678899999999999999999999999999998764
No 69
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=5.5e-39 Score=345.07 Aligned_cols=364 Identities=27% Similarity=0.431 Sum_probs=216.0
Q ss_pred CCCCCeeeeccCCcc-ccCCcccCCcccceEEeccCCccccCCCCccccCCCCceeccccccccCCCCCccccccccccc
Q 001782 99 LSFLRFINFANNGFS-GEIPGEIGRLFRLETLILANNSFSGKIPSNLSRCSNLINFHARGNNLVGQIPPDIGYSWLKLEF 177 (1013)
Q Consensus 99 l~~L~~L~l~~n~l~-~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~ 177 (1013)
|+..+-.|+++|.|+ +..|.....+++++.|.|...++. .+|++++.|.+|++|.+++|++.
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~---------------- 68 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI---------------- 68 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH----------------
Confidence 444555566666666 346666666777777777776666 67777777776666666666665
Q ss_pred eecccccccccCCCCccCCCCcceeeecccccC-CCCCCccccccccceeecccccccCCCcchhccCCccceeeccCCc
Q 001782 178 LSLRDNLLAGQLAPSIGNISNLQVLSIGENRLS-GRLPDSLGQLRSLYYLSISENAFSGMFPSSIFNISSLESISLLGNR 256 (1013)
Q Consensus 178 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~ 256 (1013)
.+...++.|+.|+.+.+.+|++. .-+|..+-.|..|+.||||+|+++ ..|..+..-+++-.|+||+|+
T Consensus 69 ----------~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~ 137 (1255)
T KOG0444|consen 69 ----------SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNN 137 (1255)
T ss_pred ----------hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCc
Confidence 22234555666666777777664 236777777888888888888887 677777777888888888888
Q ss_pred cCCCCCCCcCCCCCCCcEEEeeeccccccCCCCCCCCCCCceEEcccCcccccccccccCCCCccccccccCcCCCCCCC
Q 001782 257 LEGSLPVNIGFSLPNLENLSVRQNNYTGSLPHSLSNASNLRLLDFSLNHFSGQVKIDFNRLPNLFRLSFSKNNLGTGAIG 336 (1013)
Q Consensus 257 l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 336 (1013)
|. .||..++.+++.|-+|||++|++. .+|+....+..|++|+|++|.+...--..+..+++|+.|.+++.+=+
T Consensus 138 Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRT----- 210 (1255)
T KOG0444|consen 138 IE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRT----- 210 (1255)
T ss_pred cc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccch-----
Confidence 87 888888877888888888888887 67777777888888888888765332222222333333333322100
Q ss_pred ChhhhhhcccccccccccccccccCCccchhhhcchhhHHHHhccchhHHhhcccccceeecccccccCCcccccCCCCC
Q 001782 337 DLDFIAHLTNCSKLEALGLDTNIFGGVLPLSIANLSSTIILFSMGLNQIYVKNLVNLNGFGLEYNQLTGPIPHAIGELRN 416 (1013)
Q Consensus 337 ~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 416 (1013)
...+|.++..+.+
T Consensus 211 -------------------------------------------------------------------l~N~Ptsld~l~N 223 (1255)
T KOG0444|consen 211 -------------------------------------------------------------------LDNIPTSLDDLHN 223 (1255)
T ss_pred -------------------------------------------------------------------hhcCCCchhhhhh
Confidence 0134555555555
Q ss_pred CCEEEccCCccCccCCccccccCccCEEEcCCCcccCCCCcccccCcccceeecccccccccCCchhhcccchhhhhccC
Q 001782 417 LQVLDLHHNNLDGHIPESLGNLTILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSILLDLS 496 (1013)
Q Consensus 417 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~Ls 496 (1013)
|..+|||.|++. ..|+.+.++.+|+.|+||+|+|+ .+.-......+|+.|+||.|+++ .+|..++. ++.|+.|.+.
T Consensus 224 L~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcK-L~kL~kLy~n 299 (1255)
T KOG0444|consen 224 LRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCK-LTKLTKLYAN 299 (1255)
T ss_pred hhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhh-hHHHHHHHhc
Confidence 666666666665 55555555555666666666555 33333444445555555555555 44444443 4444444444
Q ss_pred CCeec-ccCCccccCcCCCcEEEccCCCCCCCCccccccccccccccccccccccccCccccccCCCCeEecccc
Q 001782 497 GNLLT-GSIPAEVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRN 570 (1013)
Q Consensus 497 ~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 570 (1013)
+|+++ .-+|..++.+.+|+.+..++|.+. ..|+.++.|.+|+.|.|+.|++. .+|+.+.-|+.|+.|||..|
T Consensus 300 ~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreN 372 (1255)
T KOG0444|consen 300 NNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLREN 372 (1255)
T ss_pred cCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCC
Confidence 44433 014445555555555555555554 45555555555555555555554 44555555555555555444
No 70
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=336.09 Aligned_cols=197 Identities=24% Similarity=0.328 Sum_probs=173.7
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCC-C-----CccceEEEEeecCCcccc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIR-H-----RNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~~~ 773 (1013)
+|.+.++||+|+||.|.+|.+.++++.||||+++... ....+...|+.+|..++ | -|+|++++++ ...
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F-----~fr 260 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF-----YFR 260 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc-----ccc
Confidence 8999999999999999999999999999999998443 23456678999999996 4 4899999994 556
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC--CceEE
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD--MVAHV 851 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl 851 (1013)
++.|+|+|.++ .+|+++++.++- .+++...++.|+.||+.||.+||+. +|||+||||+|||+.+. ..+||
T Consensus 261 ~HlciVfELL~-~NLYellK~n~f----~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKV 332 (586)
T KOG0667|consen 261 NHLCIVFELLS-TNLYELLKNNKF----RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKV 332 (586)
T ss_pred cceeeeehhhh-hhHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeE
Confidence 99999999998 899999998854 5799999999999999999999999 99999999999999754 48999
Q ss_pred ccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 852 GDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 852 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
+|||.|+...+. ....+.+..|+|||++.|.+|+.+.||||||||+.||++|.+.|.+.
T Consensus 333 IDFGSSc~~~q~-----------vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 333 IDFGSSCFESQR-----------VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred EecccccccCCc-----------ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 999999865432 22566789999999999999999999999999999999998888764
No 71
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.1e-36 Score=335.40 Aligned_cols=242 Identities=24% Similarity=0.289 Sum_probs=192.1
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEe
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
+.||+|+||.||+|++..++..||+|++.... ......+.+|+++++.++||||+++++++ ...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCEEEEEEe
Confidence 46999999999999999899999999997432 22345677899999999999999999985 34578999999
Q ss_pred eccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCC
Q 001782 782 YMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLP 861 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 861 (1013)
|+++|+|.+++... ..+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 76 YANGGELFFHLSRE------RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhcccc
Confidence 99999999988765 4689999999999999999999999 99999999999999999999999999987432
Q ss_pred CCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHH
Q 001782 862 PCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVM 941 (1013)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 941 (1013)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....
T Consensus 147 ~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-~~~~------------ 205 (323)
T cd05595 147 SD--------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFE------------ 205 (323)
T ss_pred CC--------CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-HHHH------------
Confidence 11 11123456899999999999999999999999999999999999999653111 0000
Q ss_pred HhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-----CHHHHHH
Q 001782 942 EIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-----QMTDVVA 999 (1013)
Q Consensus 942 ~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 999 (1013)
.+.. ..+ +. ....+..+.+++.+||+.||++|| ++.++++
T Consensus 206 ~~~~----~~~--~~------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 206 LILM----EEI--RF------------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHhc----CCC--CC------------CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 0000 000 00 011234567888899999999998 7877765
No 72
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.3e-36 Score=325.21 Aligned_cols=257 Identities=24% Similarity=0.386 Sum_probs=201.7
Q ss_pred hccCCCCCceeeccceEEEEEEEC---CCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLG---ENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
..+|++.+.||+|+||.||+|.+. ..+..||+|+++.... ...+.+.+|+.++++++||||+++++++. ..
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~ 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-----RG 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-----cC
Confidence 457899999999999999999874 4567899999875432 23456889999999999999999999964 44
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
+..++||||+++|+|.+++.... ..+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+|++|
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~d 150 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHE-----GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISG 150 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECC
Confidence 77899999999999999997642 3689999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~ 932 (1013)
||.+....... ........++..|+|||.+.+..++.++|||||||++||+++ |+.||......
T Consensus 151 fg~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-------- 215 (266)
T cd05064 151 FRRLQEDKSEA-------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-------- 215 (266)
T ss_pred Ccccccccccc-------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------
Confidence 99876432111 001112345678999999999999999999999999999875 99999753211
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
...+.+.... ++. ....++..+.+++.+||+.+|.+||++.|+.+.|+.+
T Consensus 216 ------~~~~~~~~~~------~~~----------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 216 ------DVIKAVEDGF------RLP----------APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ------HHHHHHHCCC------CCC----------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0011111000 000 0122455688999999999999999999999998764
No 73
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7.7e-36 Score=333.50 Aligned_cols=200 Identities=25% Similarity=0.387 Sum_probs=174.7
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.++|++.++||+|+||.||+|.+..++..+|+|++..... ...+.+.+|++++++++||||+++++++. .++..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEE-----ECCEE
Confidence 4689999999999999999999998999999999875432 23456889999999999999999999964 44789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+++++|.+++... +.+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKA------GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred EEEEecCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 9999999999999999765 46788999999999999999999742 799999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
+..+... ......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 151 ~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 151 SGQLIDS----------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred chhhhhh----------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 8754221 12234689999999999998999999999999999999999999975
No 74
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.8e-36 Score=335.85 Aligned_cols=240 Identities=23% Similarity=0.316 Sum_probs=191.1
Q ss_pred eeeccceEEEEEEECCCCeEEEEEEEeec---cccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeec
Q 001782 707 IGQGSFGFVYRGNLGENEMAVAVKVMNLK---QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYM 783 (1013)
Q Consensus 707 lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 783 (1013)
||+|+||.||+|++..+++.||+|++... .......+.+|++++++++||||+++++++. ..+..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ-----SPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-----cCCeEEEEEcCC
Confidence 69999999999999989999999998743 2233456788999999999999999999853 457899999999
Q ss_pred cCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCC
Q 001782 784 ECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPC 863 (1013)
Q Consensus 784 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 863 (1013)
++|+|.+++... +.+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 ~~g~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 76 NGGELFHHLQRE------GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred CCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 999999999765 4689999999999999999999999 9999999999999999999999999998753211
Q ss_pred CCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHh
Q 001782 864 SPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEI 943 (1013)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1013)
........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ..+
T Consensus 147 --------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----~~~~--------~~~ 205 (312)
T cd05585 147 --------DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----NEMY--------RKI 205 (312)
T ss_pred --------CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----HHHH--------HHH
Confidence 1123345789999999999999999999999999999999999999975211 1110 111
Q ss_pred hhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCC---HHHHHH
Q 001782 944 VDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQ---MTDVVA 999 (1013)
Q Consensus 944 i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~evl~ 999 (1013)
.. ..+ .- .......+.+++.+||+.||++||+ +.|++.
T Consensus 206 ~~----~~~-~~-------------~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 206 LQ----EPL-RF-------------PDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred Hc----CCC-CC-------------CCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 10 000 00 0112345778999999999999985 555543
No 75
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3e-36 Score=336.00 Aligned_cols=243 Identities=23% Similarity=0.313 Sum_probs=193.9
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEe
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
++||+|+||.||+|++..+++.||+|++.... ......+.+|+++++.++||||+++++++ ...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEEEe
Confidence 46999999999999999999999999997432 23345678899999999999999999885 45578999999
Q ss_pred eccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCC
Q 001782 782 YMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLP 861 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 861 (1013)
|+++|+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 y~~~g~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 76 YVNGGELFFHLSRE------RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (328)
T ss_pred CCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCC
Confidence 99999999988765 4689999999999999999999999 99999999999999999999999999987432
Q ss_pred CCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHH
Q 001782 862 PCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVM 941 (1013)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 941 (1013)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....
T Consensus 147 ~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-----~~~~--------- 204 (328)
T cd05593 147 TD--------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLF--------- 204 (328)
T ss_pred Cc--------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-----HHHH---------
Confidence 11 1112345689999999999999999999999999999999999999965311 1100
Q ss_pred HhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-----CHHHHHHH
Q 001782 942 EIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-----QMTDVVAK 1000 (1013)
Q Consensus 942 ~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 1000 (1013)
......++. -+ ......+.+++.+|++.||++|| ++.|+++.
T Consensus 205 ---~~~~~~~~~-~p-------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 205 ---ELILMEDIK-FP-------------RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred ---HHhccCCcc-CC-------------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 000000000 00 01234567889999999999997 88888753
No 76
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.4e-36 Score=312.54 Aligned_cols=247 Identities=28% Similarity=0.374 Sum_probs=197.8
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
.+.|+..+.||+|.-|+||+++..+++..+|+|++.... +....+...|.+||+.++||.++.+|+. ++.+.
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~-----fet~~ 150 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYAS-----FETDK 150 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhe-----eeccc
Confidence 446777899999999999999999999999999997443 3345678889999999999999999998 56679
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
+.|+|||||+||+|....+++.. +.+++..++.++..++-||+|||-. |||+|||||+||||.++|++.|+||
T Consensus 151 ~~cl~meyCpGGdL~~LrqkQp~----~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDF 223 (459)
T KOG0610|consen 151 YSCLVMEYCPGGDLHSLRQKQPG----KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDF 223 (459)
T ss_pred eeEEEEecCCCccHHHHHhhCCC----CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeec
Confidence 99999999999999999988754 6899999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCC------------------------------C-c-----------------cccCCCCCccccccccccc
Q 001782 855 GLARFLPPCSP------------------------------A-T-----------------ILETPSSSTGIKGTVGYVA 886 (1013)
Q Consensus 855 G~a~~~~~~~~------------------------------~-~-----------------~~~~~~~~~~~~gt~~y~a 886 (1013)
.++........ . . ......+...++||-.|.|
T Consensus 224 DLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlA 303 (459)
T KOG0610|consen 224 DLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLA 303 (459)
T ss_pred cccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccc
Confidence 98764321000 0 0 0112234557889999999
Q ss_pred ccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh--------CChhHHHhhhhhhccchhhhhc
Q 001782 887 PEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA--------LPEKVMEIVDPLLLLDLEARAS 957 (1013)
Q Consensus 887 PE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~--------~~~~~~~~i~~~l~~~~~~R~~ 957 (1013)
||++.+...+.++|.|+|||++|||+.|..||....+.+ .+..+.... ++..++++|++.+.+||..|..
T Consensus 304 PEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg 381 (459)
T KOG0610|consen 304 PEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-TLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLG 381 (459)
T ss_pred ceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-hHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhc
Confidence 999999999999999999999999999999998754332 233222211 1233455555555555555544
No 77
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=337.57 Aligned_cols=248 Identities=21% Similarity=0.300 Sum_probs=197.5
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCC-eEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENE-MAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 772 (1013)
..++|++.++||+|+||.||+|++..++ ..||+|++.... ....+.+.+|+++++.++||||+++++++. +
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~ 102 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK-----D 102 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE-----e
Confidence 3457999999999999999999876554 689999986432 233456889999999999999999999964 4
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
+...++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 103 ~~~~~lv~Ey~~~g~L~~~i~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~ 173 (340)
T PTZ00426 103 ESYLYLVLEFVIGGEFFTFLRRN------KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMT 173 (340)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEe
Confidence 57899999999999999999865 4689999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
|||+++.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...
T Consensus 174 DFG~a~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-~~~---- 237 (340)
T PTZ00426 174 DFGFAKVVDT-----------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-LIY---- 237 (340)
T ss_pred cCCCCeecCC-----------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-HHH----
Confidence 9999975432 123456899999999999988999999999999999999999999753110 000
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-----CHHHHHHH
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-----QMTDVVAK 1000 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 1000 (1013)
..+....... | ......+.+++.+|++.||++|+ +++|+++.
T Consensus 238 --------~~i~~~~~~~-p-----------------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 238 --------QKILEGIIYF-P-----------------KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred --------HHHhcCCCCC-C-----------------CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 0111100000 0 01123467888899999999995 78887653
No 78
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=5.7e-36 Score=334.69 Aligned_cols=268 Identities=23% Similarity=0.348 Sum_probs=205.6
Q ss_pred hhccCCCCCceeeccceEEEEEEECC-----CCeEEEEEEEeeccc-cchhHHHHHHHHHhcC-CCCccceEEEEeecCC
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGE-----NEMAVAVKVMNLKQR-GATKSFVAECEALRNI-RHRNLIKIITVCSSID 769 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 769 (1013)
..++|++.+.||+|+||.||+|.+.. +++.||+|+++.... ...+.+.+|+.+++++ +||||++++++|.
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~--- 81 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT--- 81 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe---
Confidence 34589999999999999999997533 357899999874322 2335678899999999 7999999999874
Q ss_pred ccccceEEEEEeeccCCCHHHHhhccccc---------------------------------------------------
Q 001782 770 FEEVDFKAIVYEYMECGSLEDWLHQSNDQ--------------------------------------------------- 798 (1013)
Q Consensus 770 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 798 (1013)
..+...+++|||+++++|.+++......
T Consensus 82 -~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
T cd05054 82 -KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE 160 (337)
T ss_pred -cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence 3346788999999999999998653210
Q ss_pred ----cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCCCCCccccCCCC
Q 001782 799 ----LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSS 874 (1013)
Q Consensus 799 ----~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~ 874 (1013)
.....+++.++..++.||+.|++|||++ +|+||||||+||++++++.+||+|||+++.+...... ..
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~------~~ 231 (337)
T cd05054 161 EGDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------VR 231 (337)
T ss_pred hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcch------hh
Confidence 0013689999999999999999999999 9999999999999999999999999999865432211 11
Q ss_pred CcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchh
Q 001782 875 STGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLE 953 (1013)
Q Consensus 875 ~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 953 (1013)
.....++..|+|||++.+..++.++|||||||++|||++ |..||......+. ....+....
T Consensus 232 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-------------~~~~~~~~~----- 293 (337)
T cd05054 232 KGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-------------FCRRLKEGT----- 293 (337)
T ss_pred ccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-------------HHHHHhccC-----
Confidence 223456778999999999999999999999999999998 9999875321110 111110000
Q ss_pred hhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhh
Q 001782 954 ARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARK 1006 (1013)
Q Consensus 954 ~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1006 (1013)
++.. .......+.+++.+||+.+|++||++.||++.|+.+.+
T Consensus 294 -~~~~----------~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 294 -RMRA----------PEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred -CCCC----------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0000 01223467899999999999999999999999998764
No 79
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=7.7e-36 Score=326.70 Aligned_cols=262 Identities=25% Similarity=0.490 Sum_probs=205.3
Q ss_pred hccCCCCCceeeccceEEEEEEECCCC-----eEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCcc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENE-----MAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFE 771 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 771 (1013)
.++|++.+.||+|+||.||+|.....+ ..||+|.+..... ....++.+|++++++++||||+++++++.
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~----- 78 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT----- 78 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc-----
Confidence 357899999999999999999886544 6799999864332 23456889999999999999999999864
Q ss_pred ccceEEEEEeeccCCCHHHHhhccccccc----------cCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCce
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQLE----------VGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNV 841 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~----------~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NI 841 (1013)
.....+++|||+++++|.+++.......+ ...+++.+++.++.|++.|++|||++ +++||||||+||
T Consensus 79 ~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Ni 155 (283)
T cd05048 79 KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNC 155 (283)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceE
Confidence 34678999999999999999976532111 14588999999999999999999999 999999999999
Q ss_pred EecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCC
Q 001782 842 LLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDN 920 (1013)
Q Consensus 842 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~ 920 (1013)
++++++.+||+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 156 l~~~~~~~~L~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~ 229 (283)
T cd05048 156 LVGEGLTVKISDFGLSRDIYSADYY------RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYG 229 (283)
T ss_pred EEcCCCcEEECCCcceeeccccccc------cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999754322111 11233456789999999998899999999999999999998 9999875
Q ss_pred cCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 921 MFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.... +..+.+... .+ + .....++..+.+++.+||+.||++||++.||++.
T Consensus 230 ~~~~--------------~~~~~i~~~---~~---~----------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 230 FSNQ--------------EVIEMIRSR---QL---L----------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred CCHH--------------HHHHHHHcC---Cc---C----------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 3211 111111100 00 0 0012345678999999999999999999999999
Q ss_pred HHH
Q 001782 1001 LCS 1003 (1013)
Q Consensus 1001 L~~ 1003 (1013)
|++
T Consensus 280 l~~ 282 (283)
T cd05048 280 LRS 282 (283)
T ss_pred Hhc
Confidence 975
No 80
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=313.77 Aligned_cols=251 Identities=22% Similarity=0.313 Sum_probs=210.7
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
+-|.++++||+|+||.||+|.++++|..||||.+..+. +.+++.+|+.+|++.+.|+||++||.+. .....|+
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYF-----K~sDLWI 105 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYF-----KHSDLWI 105 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhc-----cCCceEe
Confidence 34677899999999999999999999999999987554 3578999999999999999999999853 3467999
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
|||||..|+..+.++.++ +++.+.++..+....++||+|||.. .-+|||||+.|||+.-+|.+|++|||.|.
T Consensus 106 VMEYCGAGSiSDI~R~R~-----K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAG 177 (502)
T KOG0574|consen 106 VMEYCGAGSISDIMRARR-----KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAG 177 (502)
T ss_pred ehhhcCCCcHHHHHHHhc-----CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccc
Confidence 999999999999998764 5899999999999999999999999 89999999999999999999999999997
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCCh
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPE 938 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~ 938 (1013)
.+. +...+.....||+.|||||++..-.|+.++||||+|++..||..|++||.+...-...+.
T Consensus 178 QLT--------DTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM--------- 240 (502)
T KOG0574|consen 178 QLT--------DTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM--------- 240 (502)
T ss_pred hhh--------hhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe---------
Confidence 554 334446678899999999999999999999999999999999999999987532211000
Q ss_pred hHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 939 KVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 939 ~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
-|.. ..+.+.++++....+.+++++|+-..|++|.||-++++.
T Consensus 241 ------------IPT~-------PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 241 ------------IPTK-------PPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ------------ccCC-------CCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 0000 012223456667788999999999999999999888653
No 81
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=6.2e-36 Score=339.75 Aligned_cols=269 Identities=26% Similarity=0.384 Sum_probs=207.3
Q ss_pred hhhhccCCCCCceeeccceEEEEEEECCC-----CeEEEEEEEeeccc-cchhHHHHHHHHHhcCC-CCccceEEEEeec
Q 001782 695 SKATNDFSSSNMIGQGSFGFVYRGNLGEN-----EMAVAVKVMNLKQR-GATKSFVAECEALRNIR-HRNLIKIITVCSS 767 (1013)
Q Consensus 695 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~ 767 (1013)
....++|++.++||+|+||.||+|++... +..||||++..... ...+.+.+|+++++++. ||||++++++|.
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~- 111 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT- 111 (400)
T ss_pred eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc-
Confidence 34467899999999999999999987432 35699999974433 23457899999999996 999999999964
Q ss_pred CCccccceEEEEEeeccCCCHHHHhhcccccc------------------------------------------------
Q 001782 768 IDFEEVDFKAIVYEYMECGSLEDWLHQSNDQL------------------------------------------------ 799 (1013)
Q Consensus 768 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------------------------------------ 799 (1013)
.....++||||+++|+|.+++.......
T Consensus 112 ----~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (400)
T cd05105 112 ----KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQ 187 (400)
T ss_pred ----cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccc
Confidence 4467899999999999999987542100
Q ss_pred ------------------------------------------ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 001782 800 ------------------------------------------EVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLK 837 (1013)
Q Consensus 800 ------------------------------------------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk 837 (1013)
....+++.++..++.|++.|++|||+. +|+|||||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dik 264 (400)
T cd05105 188 YVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLA 264 (400)
T ss_pred cchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCC
Confidence 012478889999999999999999999 99999999
Q ss_pred CCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCC
Q 001782 838 PSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRR 916 (1013)
Q Consensus 838 p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~ 916 (1013)
|+||+++.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..
T Consensus 265 p~Nill~~~~~~kL~DfGla~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~ 338 (400)
T cd05105 265 ARNVLLAQGKIVKICDFGLARDIMHDSNY------VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGT 338 (400)
T ss_pred hHhEEEeCCCEEEEEeCCcceeccccccc------cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999865332111 11223456788999999999999999999999999999997 999
Q ss_pred CCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 001782 917 PTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTD 996 (1013)
Q Consensus 917 pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 996 (1013)
||......... ...+.... ++. ....++..+.+++.+||+.||++||++.+
T Consensus 339 P~~~~~~~~~~-------------~~~~~~~~------~~~----------~~~~~~~~l~~li~~cl~~dP~~RPt~~~ 389 (400)
T cd05105 339 PYPGMIVDSTF-------------YNKIKSGY------RMA----------KPDHATQEVYDIMVKCWNSEPEKRPSFLH 389 (400)
T ss_pred CCcccchhHHH-------------HHHHhcCC------CCC----------CCccCCHHHHHHHHHHCccCHhHCcCHHH
Confidence 98754221110 01110000 000 01123456889999999999999999999
Q ss_pred HHHHHHHhhh
Q 001782 997 VVAKLCSARK 1006 (1013)
Q Consensus 997 vl~~L~~~~~ 1006 (1013)
|.+.|+.+.+
T Consensus 390 l~~~l~~l~~ 399 (400)
T cd05105 390 LSDIVESLLP 399 (400)
T ss_pred HHHHHHHHcC
Confidence 9999998754
No 82
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.8e-36 Score=348.35 Aligned_cols=267 Identities=23% Similarity=0.313 Sum_probs=206.9
Q ss_pred hhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCc
Q 001782 693 DLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDF 770 (1013)
Q Consensus 693 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 770 (1013)
+.....++|++.+.||+|+||+||+|++..+++.||||++..... .....+.+|+..+..++|+|++++.+.+...+.
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 334456799999999999999999999998999999999875432 234567889999999999999998877543211
Q ss_pred ---cccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC
Q 001782 771 ---EEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM 847 (1013)
Q Consensus 771 ---~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 847 (1013)
......++||||+++|+|.+++..... ....+++.++..++.|++.||+|+|+. +|+||||||+||+++.++
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~--~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~ 180 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAK--TNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNG 180 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCC
Confidence 111246899999999999999975432 124689999999999999999999999 999999999999999999
Q ss_pred ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCcc
Q 001782 848 VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLT 927 (1013)
Q Consensus 848 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~ 927 (1013)
.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 181 ~vkL~DFGls~~~~~~~~~------~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~----- 249 (496)
T PTZ00283 181 LVKLGDFGFSKMYAATVSD------DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN----- 249 (496)
T ss_pred CEEEEecccCeeccccccc------cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----
Confidence 9999999999865432111 11334679999999999999999999999999999999999999996521
Q ss_pred HHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 928 LHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 928 ~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
... ++...+...+... ....+..+.+++.+||+.||++||++.++++.
T Consensus 250 ~~~------------~~~~~~~~~~~~~-------------~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 250 MEE------------VMHKTLAGRYDPL-------------PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHH------------HHHHHhcCCCCCC-------------CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 111 1111111100000 01224567889999999999999999999763
No 83
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.2e-36 Score=326.79 Aligned_cols=270 Identities=24% Similarity=0.351 Sum_probs=204.3
Q ss_pred ccC-CCCCceeeccceEEEEEEE----CCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccc
Q 001782 699 NDF-SSSNMIGQGSFGFVYRGNL----GENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 699 ~~y-~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 772 (1013)
++| ++.+.||+|+||+||++.. ..++..||+|++..... ...+.+.+|++++++++||||+++++++.. ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~ 79 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE---QG 79 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CC
Confidence 345 8899999999999988653 34678899999875432 234678899999999999999999998753 23
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
....++||||+++++|.+++... .+++.+++.++.|++.|++|||++ +|+||||||+||++++++.+||+
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~~-------~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~ 149 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPKH-------KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIG 149 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEe
Confidence 45689999999999999999753 589999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
|||+++.+........ ......++..|+|||++.+..++.++||||||+++|||++|..||...... .....
T Consensus 150 dfg~~~~~~~~~~~~~-----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~---~~~~~ 221 (283)
T cd05080 150 DFGLAKAVPEGHEYYR-----VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK---FEEMI 221 (283)
T ss_pred ecccccccCCcchhhc-----cCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch---hhhhh
Confidence 9999986543221110 012234567799999999889999999999999999999999998653211 11111
Q ss_pred HhhC----ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhh
Q 001782 933 KMAL----PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSAR 1005 (1013)
Q Consensus 933 ~~~~----~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1005 (1013)
.... .....+.++... ++. ....++..+.+++.+||+.+|++|||+++|++.|+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~------~~~----------~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 222 GPKQGQMTVVRLIELLERGM------RLP----------CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred cccccccchhhhhhhhhcCC------CCC----------CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1100 001111111110 000 01123467889999999999999999999999999875
No 84
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.4e-36 Score=340.85 Aligned_cols=209 Identities=23% Similarity=0.361 Sum_probs=176.4
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.++||+|+||+||+|++..+++.||||++.... ......+.+|+++++.++||||+++++++ ..+..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF-----QDENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCe
Confidence 47899999999999999999999999999999997432 22345678899999999999999999985 45578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++|+|.+++... +.+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKK------DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred EEEEECCCCCcHHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecc
Confidence 99999999999999999765 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccC------------------------------CCCCcccccccccccccccCCCCCCcccchHHHH
Q 001782 856 LARFLPPCSPATILET------------------------------PSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFG 905 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG 905 (1013)
++..+........... .......+||+.|+|||++.+..++.++||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 9876532211100000 0011234699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCc
Q 001782 906 ILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 906 ~il~ell~G~~pf~~~ 921 (1013)
|++|||++|..||...
T Consensus 227 ~il~el~~G~~Pf~~~ 242 (364)
T cd05599 227 VIMYEMLVGYPPFCSD 242 (364)
T ss_pred hHHHHhhcCCCCCCCC
Confidence 9999999999999753
No 85
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.1e-35 Score=323.87 Aligned_cols=267 Identities=24% Similarity=0.425 Sum_probs=208.3
Q ss_pred hccCCCCCceeeccceEEEEEEE-----CCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNL-----GENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 772 (1013)
.++|.+.+.||+|+||.||++.. ..++..||+|.+........+.+.+|++++++++||||+++++++. .
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 78 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-----E 78 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----c
Confidence 45788999999999999999985 2345679999987554445567999999999999999999999964 4
Q ss_pred cceEEEEEeeccCCCHHHHhhccccc-------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQ-------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH 845 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 845 (1013)
....++||||+++++|.+++...... .....+++.+++.++.|++.||+|||++ |++||||||+||++++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~ 155 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGE 155 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc
Confidence 47789999999999999999754311 1123589999999999999999999999 9999999999999999
Q ss_pred CCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCC
Q 001782 846 DMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFND 924 (1013)
Q Consensus 846 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~ 924 (1013)
++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 156 ~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~ 229 (288)
T cd05093 156 NLLVKIGDFGMSRDVYSTDYY------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN 229 (288)
T ss_pred CCcEEeccCCccccccCCcee------ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 999999999999755322111 11223445788999999998899999999999999999998 89998653211
Q ss_pred CccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 925 GLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
. .+.......+...+ ...+..+.+++.+||+.||.+|||+.||.+.|+++
T Consensus 230 ~-----------------~~~~i~~~~~~~~~-------------~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 230 E-----------------VIECITQGRVLQRP-------------RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred H-----------------HHHHHHcCCcCCCC-------------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 0 00000000000000 01234578999999999999999999999999998
Q ss_pred hhhh
Q 001782 1005 RKIF 1008 (1013)
Q Consensus 1005 ~~~~ 1008 (1013)
.+..
T Consensus 280 ~~~~ 283 (288)
T cd05093 280 AKAS 283 (288)
T ss_pred HHhc
Confidence 8653
No 86
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=8.4e-36 Score=339.82 Aligned_cols=208 Identities=24% Similarity=0.336 Sum_probs=174.9
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++. +.+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~-----~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ-----DKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe-----cCCEE
Confidence 5888999999999999999999999999999997432 223456889999999999999999999964 45789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~------~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRM------EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred EEEEecCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 9999999999999999765 4688999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccc---------------------------------------cCCCCCcccccccccccccccCCCCCCc
Q 001782 857 ARFLPPCSPATIL---------------------------------------ETPSSSTGIKGTVGYVAPEYGMGGDMSA 897 (1013)
Q Consensus 857 a~~~~~~~~~~~~---------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 897 (1013)
++.+......... ..........||+.|+|||++.+..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 8643211100000 0000112457999999999999989999
Q ss_pred ccchHHHHHHHHHHHhCCCCCCCc
Q 001782 898 TGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 898 ~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
++|||||||++|||++|+.||...
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~~ 251 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLAP 251 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcCC
Confidence 999999999999999999999753
No 87
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.5e-35 Score=325.33 Aligned_cols=279 Identities=22% Similarity=0.286 Sum_probs=201.6
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcC---CCCccceEEEEeecCCccccc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNI---RHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~ 774 (1013)
+|++.+.||+|+||+||+|++..+++.||+|.++.... .....+.+|+++++++ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 58889999999999999999999999999999874322 2234566788777765 699999999997654444556
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..++||||+. ++|.+++..... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP----PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcc
Confidence 7899999998 689998876532 3589999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
|+++..... .......||..|+|||++.+..++.++||||+||++|||++|++||...... .........
T Consensus 153 g~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~ 222 (288)
T cd07863 153 GLARIYSCQ---------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDL 222 (288)
T ss_pred CccccccCc---------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHH
Confidence 999765321 1123456789999999999999999999999999999999999998653211 111111111
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
........+-.. .. .+...... ...+.......+....+.+++.+|++.||++|||+.|++.
T Consensus 223 ~~~~~~~~~~~~-~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 223 IGLPPEDDWPRD-VT-LPRGAFSP-RGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hCCCChhhCccc-cc-ccccccCC-CCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 100000000000 00 00000000 0000000111233456789999999999999999999975
No 88
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.1e-35 Score=319.37 Aligned_cols=257 Identities=26% Similarity=0.461 Sum_probs=204.6
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
..+|++.++||+|+||.||+|.+..+++.||+|++... ....+.+.+|++++++++||||+++++++. .+...+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPFY 78 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEc-----CCCCcE
Confidence 34688889999999999999999888999999998643 333567889999999999999999999864 346789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++..... ..+++..++.++.|++.|++|||++ +++||||||+||++++++.+||+|||.+
T Consensus 79 lv~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~ 151 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNR----QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 151 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccc
Confidence 99999999999999976432 4689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||...... .
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-----~------ 213 (263)
T cd05052 152 RLMTGDTYT-------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----Q------ 213 (263)
T ss_pred cccccceee-------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----H------
Confidence 865432110 1112234678999999999999999999999999999998 99998653111 1
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
....+..... + .. ...++..+.+++.+||+.||++||++.|++++|+.+
T Consensus 214 ---~~~~~~~~~~--~-~~-------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 214 ---VYELLEKGYR--M-ER-------------PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---HHHHHHCCCC--C-CC-------------CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0011110000 0 00 012345688999999999999999999999999875
No 89
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=9.4e-36 Score=348.02 Aligned_cols=255 Identities=20% Similarity=0.269 Sum_probs=201.4
Q ss_pred ccCCCCCceeeccceEEEEEEECCC-CeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGEN-EMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
..|.+.+.||+|+||.||+|....+ +..||+|.+..........+.+|+++++.++||||+++++++. ..+..+
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-----~~~~~~ 141 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFK-----SDDKLL 141 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-----ECCEEE
Confidence 3589999999999999999998777 7889999876554444556788999999999999999999964 457899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++|+|.+++..... ....+++.++..++.|++.||+|+|++ +|+||||||+||+++.++.+||+|||++
T Consensus 142 lv~E~~~gg~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla 216 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQRLK--EHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFS 216 (478)
T ss_pred EEEECCCCCCHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCc
Confidence 99999999999998865321 124688999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
+.+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 217 ~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-------------- 276 (478)
T PTZ00267 217 KQYSDSVS------LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-------------- 276 (478)
T ss_pred eecCCccc------cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--------------
Confidence 86543211 1113345699999999999999999999999999999999999999964211
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.+++...+......- ....+..+.+++.+||+.||++||++++++.
T Consensus 277 ---~~~~~~~~~~~~~~~-------------~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 277 ---REIMQQVLYGKYDPF-------------PCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ---HHHHHHHHhCCCCCC-------------CccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 111111111110000 0112345788999999999999999999865
No 90
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1e-35 Score=343.63 Aligned_cols=281 Identities=19% Similarity=0.243 Sum_probs=198.2
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCc---ccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDF---EEV 773 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~ 773 (1013)
...+|++.++||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++||||+++++++....+ ...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3468999999999999999999999899999999885322 234579999999999999999988654322 223
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC-ceEEc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM-VAHVG 852 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~ 852 (1013)
...++||||++ +++.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++ .+||+
T Consensus 140 ~~l~lvmE~~~-~~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 140 IFLNVVMEFIP-QTVHKYMKHYAR--NNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred eEEEEEEecCC-ccHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeee
Confidence 45779999999 678777754311 124689999999999999999999999 999999999999999665 79999
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHH
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEF 931 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~ 931 (1013)
|||+|+.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|.+||...... ......
T Consensus 214 DFGla~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i 283 (440)
T PTZ00036 214 DFGSAKNLLAGQ---------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRI 283 (440)
T ss_pred ccccchhccCCC---------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHH
Confidence 999998653211 12345689999999998764 6899999999999999999999999763221 111121
Q ss_pred HHhhCChhHHHhhhhhhccchh-hhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 932 AKMALPEKVMEIVDPLLLLDLE-ARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~-~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
......+....+ ..+ ..+.. .+.................+..+.+++.+||+.||.+|||+.|+++
T Consensus 284 ~~~~~~p~~~~~-~~~-~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 284 IQVLGTPTEDQL-KEM-NPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHhCCCCHHHH-HHh-chhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 111111110000 000 00000 0000000000000001123456889999999999999999999984
No 91
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=331.29 Aligned_cols=245 Identities=25% Similarity=0.376 Sum_probs=202.6
Q ss_pred ceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeeccC
Q 001782 706 MIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYMEC 785 (1013)
Q Consensus 706 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 785 (1013)
+||+|.||+||.|++..+...+|||-+........+-+..|+..-++++|.|||+++|.| .++++.-+.||-++|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~-----senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSV-----SENGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhcc-----CCCCeEEEEeecCCC
Confidence 799999999999999999999999999877776777899999999999999999999985 455788899999999
Q ss_pred CCHHHHhhccccccccCCC--CHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEec-CCCceEEccccccccCCC
Q 001782 786 GSLEDWLHQSNDQLEVGNF--NVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLD-HDMVAHVGDFGLARFLPP 862 (1013)
Q Consensus 786 gsL~~~l~~~~~~~~~~~l--~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DFG~a~~~~~ 862 (1013)
|+|.++++.. ++++ .+.+.-.+..||++||.|||+. .|||||||-+||||. -.|.+||+|||-++.+..
T Consensus 657 GSLSsLLrsk-----WGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg 728 (1226)
T KOG4279|consen 657 GSLSSLLRSK-----WGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG 728 (1226)
T ss_pred CcHHHHHHhc-----cCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc
Confidence 9999999876 3566 7888889999999999999999 999999999999995 578999999999987643
Q ss_pred CCCCccccCCCCCcccccccccccccccCCC--CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhH
Q 001782 863 CSPATILETPSSSTGIKGTVGYVAPEYGMGG--DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKV 940 (1013)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~ 940 (1013)
- ......+.||..|||||++..+ .|+.++|||||||++.||.||++||....... ..+.+
T Consensus 729 i--------nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq---AAMFk------- 790 (1226)
T KOG4279|consen 729 I--------NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ---AAMFK------- 790 (1226)
T ss_pred C--------CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh---Hhhhh-------
Confidence 2 2234567899999999999887 48889999999999999999999997642211 00000
Q ss_pred HHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 941 MEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 941 ~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
-.|....| +.+++...+...++.+|+.+||.+||+|.++++
T Consensus 791 ----VGmyKvHP--------------~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 791 ----VGMYKVHP--------------PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ----hcceecCC--------------CCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 01111111 122455667788999999999999999999875
No 92
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.7e-35 Score=323.47 Aligned_cols=262 Identities=29% Similarity=0.493 Sum_probs=204.8
Q ss_pred hccCCCCCceeeccceEEEEEEECC-----CCeEEEEEEEeecccc-chhHHHHHHHHHhcCCCCccceEEEEeecCCcc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGE-----NEMAVAVKVMNLKQRG-ATKSFVAECEALRNIRHRNLIKIITVCSSIDFE 771 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 771 (1013)
.++|.+.+.||+|+||.||+|++.. +++.||+|++...... ..+.+.+|++++++++||||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----- 78 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCT----- 78 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEe-----
Confidence 4578899999999999999998743 3578999998754433 3567999999999999999999999964
Q ss_pred ccceEEEEEeeccCCCHHHHhhcccc--------ccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEe
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSND--------QLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLL 843 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll 843 (1013)
.....++||||+++++|.++++.... ......+++.++..++.|++.|++|||++ +++||||||+||++
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili 155 (280)
T cd05049 79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLV 155 (280)
T ss_pred cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEE
Confidence 34789999999999999999976532 11224588999999999999999999999 99999999999999
Q ss_pred cCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcC
Q 001782 844 DHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMF 922 (1013)
Q Consensus 844 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~ 922 (1013)
+.++.+||+|||.++......... ......+++.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 156 ~~~~~~kl~d~g~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~ 229 (280)
T cd05049 156 GYDLVVKIGDFGMSRDVYTTDYYR------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS 229 (280)
T ss_pred cCCCeEEECCcccceecccCccee------cCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence 999999999999987543222111 1223345788999999999999999999999999999998 999986532
Q ss_pred CCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 923 NDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
.. ...+.+. ...+... ....+..+.+++.+||+.||++||++.||++.|+
T Consensus 230 ~~--------------~~~~~~~---~~~~~~~-------------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 230 NE--------------EVIECIT---QGRLLQR-------------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HH--------------HHHHHHH---cCCcCCC-------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11 0011111 0000000 0122456789999999999999999999999986
Q ss_pred H
Q 001782 1003 S 1003 (1013)
Q Consensus 1003 ~ 1003 (1013)
+
T Consensus 280 ~ 280 (280)
T cd05049 280 K 280 (280)
T ss_pred C
Confidence 3
No 93
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=300.03 Aligned_cols=201 Identities=24% Similarity=0.409 Sum_probs=174.9
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec--cccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK--QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
..+.|++.+.||+|.|+.||++....+|+.+|+|++... .....+.+.+|+.+-+.++||||+++.+. +....
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~t-----i~~~~ 83 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-----IQEES 83 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhh-----hcccc
Confidence 356888999999999999999999999999999998633 22356789999999999999999999987 45668
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC---CCceEE
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH---DMVAHV 851 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl 851 (1013)
+.|+|+|+|+|++|..-+-.+ ..+++..+-....||++|+.|.|.+ +|||||+||+|+++.. .--+|+
T Consensus 84 ~~ylvFe~m~G~dl~~eIV~R------~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL 154 (355)
T KOG0033|consen 84 FHYLVFDLVTGGELFEDIVAR------EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKL 154 (355)
T ss_pred eeEEEEecccchHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceee
Confidence 899999999999987555433 3578888999999999999999999 9999999999999953 346999
Q ss_pred ccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 852 GDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 852 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
+|||+|..+.. .....+..|||.|||||++...+|+..+|||+.||++|-++.|.+||.+
T Consensus 155 ~~FGvAi~l~~---------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~ 214 (355)
T KOG0033|consen 155 ADFGLAIEVND---------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 214 (355)
T ss_pred cccceEEEeCC---------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC
Confidence 99999987652 2235578899999999999999999999999999999999999999976
No 94
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=358.52 Aligned_cols=482 Identities=28% Similarity=0.333 Sum_probs=367.3
Q ss_pred EeeccccccccCccccCCCCCCCeeeeccCCccccCCc-ccCCcccceEEeccCCccccCCCCccccCCCCceecccccc
Q 001782 81 LDLSNRSIEGILSPYVGNLSFLRFINFANNGFSGEIPG-EIGRLFRLETLILANNSFSGKIPSNLSRCSNLINFHARGNN 159 (1013)
Q Consensus 81 l~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ip~-~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 159 (1013)
+|++...++ .||..+..-..|+.|+++.|.+- ..|- .+.+.-+|+.|||++|+++ ..|..+..++.|+.|.++.|.
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~ 79 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNY 79 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhh
Confidence 566666666 56666666666888888888777 4333 2344555999999999888 888888888888888888888
Q ss_pred ccCCCCCccccccccccceecccccccccCCCCccCCCCcceeeecccccCCCCCCccccccccceeecccccccCCCcc
Q 001782 160 LVGQIPPDIGYSWLKLEFLSLRDNLLAGQLAPSIGNISNLQVLSIGENRLSGRLPDSLGQLRSLYYLSISENAFSGMFPS 239 (1013)
Q Consensus 160 l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 239 (1013)
+. .+|.... +..+|++|.|.+|.+. ..|.++..+.+|++|+++.|++. .+|..+..++.++.+..++|......
T Consensus 80 i~-~vp~s~~-~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~l-- 153 (1081)
T KOG0618|consen 80 IR-SVPSSCS-NMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRL-- 153 (1081)
T ss_pred Hh-hCchhhh-hhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhh--
Confidence 88 7775554 6677888888888877 77888888888888888888887 78888888888888888888222122
Q ss_pred hhccCCccceeeccCCccCCCCCCCcCCCCCCCcEEEeeeccccccCCCCCCCCCCCceEEcccCcccccccccccCCCC
Q 001782 240 SIFNISSLESISLLGNRLEGSLPVNIGFSLPNLENLSVRQNNYTGSLPHSLSNASNLRLLDFSLNHFSGQVKIDFNRLPN 319 (1013)
Q Consensus 240 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 319 (1013)
+... ++.++|..|.+.+.++..+. .+.+ .|+|++|.+. -..+.++.+|+.|..+.|+++... -..++
T Consensus 154 --g~~~-ik~~~l~~n~l~~~~~~~i~-~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~----~~g~~ 220 (1081)
T KOG0618|consen 154 --GQTS-IKKLDLRLNVLGGSFLIDIY-NLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELE----ISGPS 220 (1081)
T ss_pred --cccc-chhhhhhhhhcccchhcchh-hhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEE----ecCcc
Confidence 2222 78888888888888887765 3444 5888888876 234667788888888888887443 24578
Q ss_pred ccccccccCcCCCCCCCChhhhhhcccccccccccccccccCCccchhhhcchhhHHHHhccchhHHhhcccccceeecc
Q 001782 320 LFRLSFSKNNLGTGAIGDLDFIAHLTNCSKLEALGLDTNIFGGVLPLSIANLSSTIILFSMGLNQIYVKNLVNLNGFGLE 399 (1013)
Q Consensus 320 L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~ 399 (1013)
|+.|+.++|.+++.. ....-.+|+.++++.|.+++.. .++ ..+.+|+.+...
T Consensus 221 l~~L~a~~n~l~~~~--------~~p~p~nl~~~dis~n~l~~lp-~wi-------------------~~~~nle~l~~n 272 (1081)
T KOG0618|consen 221 LTALYADHNPLTTLD--------VHPVPLNLQYLDISHNNLSNLP-EWI-------------------GACANLEALNAN 272 (1081)
T ss_pred hheeeeccCcceeec--------cccccccceeeecchhhhhcch-HHH-------------------HhcccceEeccc
Confidence 888888888887422 2223457888888888887653 443 456778888888
Q ss_pred cccccCCcccccCCCCCCCEEEccCCccCccCCccccccCccCEEEcCCCcccCCCCccccc-Cc-ccceeecccccccc
Q 001782 400 YNQLTGPIPHAIGELRNLQVLDLHHNNLDGHIPESLGNLTILNSLDLGFNKLRGHVPSSLGN-CQ-NLMLLSVSNNKLTG 477 (1013)
Q Consensus 400 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~-~L~~L~L~~N~l~~ 477 (1013)
+|+++ .+|..+...++|+.|++.+|.++ -+|.....++.|++|+|..|+|. .+|+.+-. .. .|..|+.+.|++.
T Consensus 273 ~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~- 348 (1081)
T KOG0618|consen 273 HNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLS- 348 (1081)
T ss_pred chhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhcccc-
Confidence 88885 78888888888999999999888 67777888889999999999988 56654332 22 3677888888887
Q ss_pred cCCchhhcccchhhhhccCCCeecccCCccccCcCCCcEEEccCCCCCCCCccccccccccccccccccccccccCcccc
Q 001782 478 ALPPQILGIVTLSILLDLSGNLLTGSIPAEVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPLALK 557 (1013)
Q Consensus 478 ~~p~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 557 (1013)
..|..-....+.|+.|.+.+|.|+...-..+.+..+|+.|+|++|+|.......+.++..|++|+||+|+|+ .+|.++.
T Consensus 349 ~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva 427 (1081)
T KOG0618|consen 349 TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVA 427 (1081)
T ss_pred ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHH
Confidence 555444444677888999999999887778888899999999999997444445788999999999999998 7889999
Q ss_pred ccCCCCeEeccccccccccccccccccccceeecCCccCCCC-CCCCCccCCCcceeeeCCcC
Q 001782 558 TLKSIKELDLSRNNLSGQIPEFLENLSFLEYLNLSYNHLEGE-VPRRGVFSNKTRFYFTGNKR 619 (1013)
Q Consensus 558 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~~~~~~~~~~~N~~ 619 (1013)
.+..|++|...+|+|. ..| .+.+++.|+.+|+|.|+|+-. +|.....+++..+.+.||+|
T Consensus 428 ~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 428 NLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred hhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 9999999999999998 677 788899999999999998753 34333347888888999987
No 95
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.2e-35 Score=336.29 Aligned_cols=208 Identities=23% Similarity=0.340 Sum_probs=176.4
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.+.||+|+||+||+|++..+++.||+|++.... ......+.+|+.++++++||+|+++++.+ .+...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCCe
Confidence 47899999999999999999999899999999997432 22335678899999999999999999985 45578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++|+|.+++... +.+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKK------DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeecc
Confidence 99999999999999999865 5789999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCcccc---------------------------CCCCCcccccccccccccccCCCCCCcccchHHHHHHH
Q 001782 856 LARFLPPCSPATILE---------------------------TPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILL 908 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il 908 (1013)
+++.+.......... ........+||+.|+|||++.+..++.++|||||||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 997654221100000 00011245799999999999999999999999999999
Q ss_pred HHHHhCCCCCCC
Q 001782 909 LEMFTRRRPTDN 920 (1013)
Q Consensus 909 ~ell~G~~pf~~ 920 (1013)
|||++|+.||..
T Consensus 227 ~ell~G~~Pf~~ 238 (363)
T cd05628 227 YEMLIGYPPFCS 238 (363)
T ss_pred HHHHhCCCCCCC
Confidence 999999999975
No 96
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.9e-36 Score=338.86 Aligned_cols=258 Identities=22% Similarity=0.329 Sum_probs=203.5
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.+.||+|+||+||+|++..+++.||+|++.... ......+.+|+++++.++||||+++++++ .+++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF-----QDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe-----ecCCe
Confidence 47899999999999999999999899999999997432 23446688999999999999999999885 45578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++++|.+++... ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRK------DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCC
Confidence 99999999999999999865 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCcc---------------------ccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhC
Q 001782 856 LARFLPPCSPATI---------------------LETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTR 914 (1013)
Q Consensus 856 ~a~~~~~~~~~~~---------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G 914 (1013)
++........... ...........||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 9986543320000 0001123345689999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCccHHHHHHhhCChhHHHhhh--hhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 001782 915 RRPTDNMFNDGLTLHEFAKMALPEKVMEIVD--PLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI 992 (1013)
Q Consensus 915 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 992 (1013)
+.||...... .. ...+.. .... .+.. ...+..+.+++.+|+. ||.+||
T Consensus 227 ~~Pf~~~~~~----~~---------~~~i~~~~~~~~-----~p~~-----------~~~~~~~~~li~~ll~-dp~~R~ 276 (350)
T cd05573 227 FPPFYSDTLQ----ET---------YNKIINWKESLR-----FPPD-----------PPVSPEAIDLICRLLC-DPEDRL 276 (350)
T ss_pred CCCCCCCCHH----HH---------HHHHhccCCccc-----CCCC-----------CCCCHHHHHHHHHHcc-ChhhcC
Confidence 9999753211 00 011111 0000 0000 0124557889999997 999999
Q ss_pred C-HHHHHHH
Q 001782 993 Q-MTDVVAK 1000 (1013)
Q Consensus 993 s-~~evl~~ 1000 (1013)
+ ++|+++.
T Consensus 277 ~s~~~ll~h 285 (350)
T cd05573 277 GSFEEIKSH 285 (350)
T ss_pred CCHHHHhcC
Confidence 9 9999864
No 97
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=297.37 Aligned_cols=256 Identities=23% Similarity=0.346 Sum_probs=207.7
Q ss_pred hhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc----c----hhHHHHHHHHHhcC-CCCccceEEEEe
Q 001782 695 SKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG----A----TKSFVAECEALRNI-RHRNLIKIITVC 765 (1013)
Q Consensus 695 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~----~~~~~~E~~~l~~l-~h~niv~~~~~~ 765 (1013)
+.....|...+.+|.|..++|.++..+.++..+|+|++...... . .+.-.+|+.+++++ .||+|+.+.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 34556788899999999999999999999999999999744321 1 23346799999998 699999999994
Q ss_pred ecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC
Q 001782 766 SSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH 845 (1013)
Q Consensus 766 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 845 (1013)
+.+...++|+|.|+.|.|.|++... ..+++.+..+|+.|+.+|++|||.+ .|||||+||+|||+|+
T Consensus 93 -----es~sF~FlVFdl~prGELFDyLts~------VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILldd 158 (411)
T KOG0599|consen 93 -----ESDAFVFLVFDLMPRGELFDYLTSK------VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDD 158 (411)
T ss_pred -----cCcchhhhhhhhcccchHHHHhhhh------eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeecc
Confidence 5668899999999999999999886 5799999999999999999999999 9999999999999999
Q ss_pred CCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCC------CCCCcccchHHHHHHHHHHHhCCCCCC
Q 001782 846 DMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG------GDMSATGDVYSFGILLLEMFTRRRPTD 919 (1013)
Q Consensus 846 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DIwSlG~il~ell~G~~pf~ 919 (1013)
+.++||+|||+|+.+.++ .+....+|||+|.|||.+.. ..|+..+|+||.||++|.++.|.+||.
T Consensus 159 n~~i~isDFGFa~~l~~G---------ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFw 229 (411)
T KOG0599|consen 159 NMNIKISDFGFACQLEPG---------EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFW 229 (411)
T ss_pred ccceEEeccceeeccCCc---------hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchh
Confidence 999999999999977543 33566899999999998764 357889999999999999999999996
Q ss_pred CcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 920 NMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
...+ .-+++-.+...+ .-..+++.+......+++.+|++.||.+|.|++|+++
T Consensus 230 HRkQ-----------------mlMLR~ImeGky----------qF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 230 HRKQ-----------------MLMLRMIMEGKY----------QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHH-----------------HHHHHHHHhccc----------ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 5210 001111111111 1222344455666788999999999999999999986
Q ss_pred H
Q 001782 1000 K 1000 (1013)
Q Consensus 1000 ~ 1000 (1013)
.
T Consensus 283 H 283 (411)
T KOG0599|consen 283 H 283 (411)
T ss_pred C
Confidence 3
No 98
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.9e-35 Score=320.60 Aligned_cols=262 Identities=23% Similarity=0.346 Sum_probs=206.1
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.++||+|+||.||+|++..+++.||+|.+.... ......+.+|+++++.++||||+++++++. ..+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI-----EDNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE-----ECCe
Confidence 57999999999999999999998899999999886422 223356889999999999999999999854 3467
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++++|.+++...... ...+++.++..++.|++.|++|||++ +++|+||||+||+++.++.++|+|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQ--KRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhc--cCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccc
Confidence 89999999999999988653221 13578899999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
.+..+..... ......|++.|+|||++.+..++.++||||+|+++|||++|+.||....... ..+.
T Consensus 152 ~~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~---~~~~--- 217 (267)
T cd08228 152 LGRFFSSKTT--------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL---FSLC--- 217 (267)
T ss_pred cceeccchhH--------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH---HHHH---
Confidence 9886542211 1223458889999999988889999999999999999999999986432111 1110
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhh
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSAR 1005 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1005 (1013)
..+.. ..+ +. . .....+..+.+++.+||+.+|++||++.||++.++.++
T Consensus 218 ------~~~~~---~~~---~~-------~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 218 ------QKIEQ---CDY---PP-------L--PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ------HHHhc---CCC---CC-------C--ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 00000 000 00 0 01123456889999999999999999999999998764
No 99
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.2e-35 Score=319.13 Aligned_cols=265 Identities=25% Similarity=0.409 Sum_probs=203.4
Q ss_pred CCCCCceeeccceEEEEEEECCC---CeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCc-cccc
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGEN---EMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDF-EEVD 774 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 774 (1013)
|++.+.||+|+||.||+|....+ +..||+|+++.... .....+.+|++.++.++||||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 57889999999999999987543 47899999874432 234578999999999999999999998754322 2334
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..+++|||+++++|.+++...........+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 5799999999999999986653322234689999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~ 933 (1013)
|.++.+....... ......++..|+|||++.+..++.++|||||||++|||++ |..||...... +.
T Consensus 158 g~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-----~~-- 224 (273)
T cd05035 158 GLSKKIYSGDYYR------QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-----EI-- 224 (273)
T ss_pred cceeecccccccc------ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-----HH--
Confidence 9998654322110 1112234678999999988899999999999999999999 88888653211 00
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
...... ..... ....++..+.+++.+||+.||++||++.|+++.|+++
T Consensus 225 ------~~~~~~----~~~~~-------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 225 ------YDYLRH----GNRLK-------------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ------HHHHHc----CCCCC-------------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000000 00000 0012345688999999999999999999999999875
No 100
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.8e-35 Score=323.43 Aligned_cols=267 Identities=26% Similarity=0.448 Sum_probs=208.7
Q ss_pred hccCCCCCceeeccceEEEEEEEC-----CCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLG-----ENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 772 (1013)
.++|.+.+.||+|+||.||+|++. .++..|++|.+........+.+.+|++++++++||||+++++++. .
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 78 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCG-----D 78 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEc-----c
Confidence 356888899999999999999863 245678999987555444567899999999999999999999964 4
Q ss_pred cceEEEEEeeccCCCHHHHhhccccc----------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceE
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQ----------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVL 842 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIl 842 (1013)
....++||||+++++|.+++...... .....+++.+++.++.||+.|++|||++ +++||||||+||+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil 155 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCL 155 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEE
Confidence 46789999999999999999764321 1123589999999999999999999999 9999999999999
Q ss_pred ecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCc
Q 001782 843 LDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNM 921 (1013)
Q Consensus 843 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~ 921 (1013)
++.++.+||+|||++......... .......++..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 156 ~~~~~~~~l~dfg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 229 (291)
T cd05094 156 VGANLLVKIGDFGMSRDVYSTDYY------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL 229 (291)
T ss_pred EccCCcEEECCCCcccccCCCcee------ecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999754332111 11233456789999999999999999999999999999998 99998653
Q ss_pred CCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 922 FNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
... . .++.........++ ..++..+.+++.+||+.||++|||+.+|+++|
T Consensus 230 ~~~-----~------------~~~~~~~~~~~~~~-------------~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l 279 (291)
T cd05094 230 SNT-----E------------VIECITQGRVLERP-------------RVCPKEVYDIMLGCWQREPQQRLNIKEIYKIL 279 (291)
T ss_pred CHH-----H------------HHHHHhCCCCCCCC-------------ccCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 211 0 00100000000000 11245688999999999999999999999999
Q ss_pred HHhhhhh
Q 001782 1002 CSARKIF 1008 (1013)
Q Consensus 1002 ~~~~~~~ 1008 (1013)
+++.+..
T Consensus 280 ~~~~~~~ 286 (291)
T cd05094 280 HALGKAT 286 (291)
T ss_pred HHHHhhc
Confidence 9997654
No 101
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=7.8e-36 Score=322.48 Aligned_cols=258 Identities=31% Similarity=0.481 Sum_probs=207.7
Q ss_pred hhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 696 KATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 696 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
....+|++.++||+|+||.||+|.+.. +..||+|++..........+.+|+.+++.++||||+++++++. ....
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 76 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS-----VGEP 76 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEe-----cCCC
Confidence 455689999999999999999999986 7889999987665545677899999999999999999999864 4467
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++++|.+++..... ..+++.++..++.|++.|++|||++ +++||||||+||++++++.+||+|||
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g 149 (261)
T cd05148 77 VYIITELMEKGSLLAFLRSPEG----QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFG 149 (261)
T ss_pred eEEEEeecccCCHHHHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEcccc
Confidence 8999999999999999986532 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
.+........ ......++..|+|||+..+..++.++||||||+++|+|++ |+.||......
T Consensus 150 ~~~~~~~~~~--------~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~---------- 211 (261)
T cd05148 150 LARLIKEDVY--------LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH---------- 211 (261)
T ss_pred chhhcCCccc--------cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH----------
Confidence 9976532111 1123345778999999988899999999999999999998 89998653210
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
...+.+... .++.. ...++..+.+++.+||+.||.+|||++++++.|+.+
T Consensus 212 ----~~~~~~~~~------~~~~~----------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 212 ----EVYDQITAG------YRMPC----------PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ----HHHHHHHhC------CcCCC----------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 000101000 00000 012345678999999999999999999999999863
No 102
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.2e-35 Score=334.02 Aligned_cols=282 Identities=22% Similarity=0.239 Sum_probs=202.3
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec--cccchhHHHHHHHHHhcCCCCccceEEEEeecCC-cccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK--QRGATKSFVAECEALRNIRHRNLIKIITVCSSID-FEEV 773 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 773 (1013)
..++|++.+.||+|+||.||+|++..+++.||+|++... .......+.+|+.+++.++||||+++++++.... ....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 357899999999999999999999989999999998633 2233456789999999999999999999875332 1233
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++||||++ +++.+.+.. .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~D 166 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIHM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 166 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHhc--------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEec
Confidence 46799999998 567666642 478889999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||+++.... ........||+.|+|||++.+..++.++||||+||++|+|++|+.||...... ..+.....
T Consensus 167 fg~a~~~~~---------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~-~~~~~~~~ 236 (359)
T cd07876 167 FGLARTACT---------NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI-DQWNKVIE 236 (359)
T ss_pred CCCcccccc---------CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence 999974321 11123456899999999999999999999999999999999999999764221 11111111
Q ss_pred hhCC--hhHHHhhhhhhccchhhhhccCCCCch----------hHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 934 MALP--EKVMEIVDPLLLLDLEARASNCGSHRT----------EIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 934 ~~~~--~~~~~~i~~~l~~~~~~R~~~~~~~~~----------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.... ......+......-...++........ ...........+.+++.+|++.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 237 QLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred hcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1110 001000000000000001100000000 000001123567899999999999999999999874
No 103
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.3e-35 Score=329.85 Aligned_cols=259 Identities=23% Similarity=0.404 Sum_probs=202.7
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCe----EEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEM----AVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
.+|++.+.||+|+||.||+|++..++. .||+|+++... ....+++.+|+.+++.++||||++++|+|..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~------ 80 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 80 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC------
Confidence 479999999999999999999855544 48999986432 2345678899999999999999999999742
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++|+||+.+|+|.+++.... ..+++..+++++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~~v~e~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~D 152 (316)
T cd05108 81 STVQLITQLMPFGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITD 152 (316)
T ss_pred CCceeeeecCCCCCHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcc
Confidence 34679999999999999998653 3578899999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~ 932 (1013)
||+++.+....... ......++..|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 153 fG~a~~~~~~~~~~------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-----~-- 219 (316)
T cd05108 153 FGLAKLLGADEKEY------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----E-- 219 (316)
T ss_pred ccccccccCCCcce------eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-----H--
Confidence 99998664322111 1122334678999999999999999999999999999998 99998653111 1
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARKI 1007 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 1007 (1013)
....+... .++... ..+...+.+++.+||+.+|.+||++.+++..+..+.+.
T Consensus 220 -------~~~~~~~~------~~~~~~----------~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 220 -------ISSILEKG------ERLPQP----------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred -------HHHHHhCC------CCCCCC----------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 11111100 000000 11234578899999999999999999999999988654
No 104
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4.5e-35 Score=318.63 Aligned_cols=265 Identities=24% Similarity=0.392 Sum_probs=201.0
Q ss_pred CCCCCceeeccceEEEEEEECCCCe--EEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCc-cccce
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEM--AVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDF-EEVDF 775 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 775 (1013)
|.+.++||+|+||.||+|++..++. .||+|.++... ....+.+.+|+++++.++||||+++++++..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4567899999999999999876654 68999886432 3335678899999999999999999998754311 12245
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.+++|||+++|+|.+++...+.......+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 789999999999999885432221224589999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
+++.+...... .......+++.|+|||+..+..++.++|||||||++|||++ |+.||...... ..
T Consensus 158 ~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~--- 223 (272)
T cd05075 158 LSKKIYNGDYY------RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS-----EI--- 223 (272)
T ss_pred cccccCcccce------ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-----HH---
Confidence 99865432211 01122345678999999999999999999999999999999 88898653111 00
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
.+.+.. .. ++.. ...++..+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 224 ------~~~~~~---~~---~~~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 224 ------YDYLRQ---GN---RLKQ----------PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ------HHHHHc---CC---CCCC----------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000000 00 0000 011234578999999999999999999999999875
No 105
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1e-35 Score=331.73 Aligned_cols=197 Identities=25% Similarity=0.394 Sum_probs=168.3
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHH---hcCCCCccceEEEEeecCCccccc
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEAL---RNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++ +.++||||+++++++ ...+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~-----~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF-----QTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE-----EcCC
Confidence 677899999999999999999899999999997432 22345566776665 456799999999985 4457
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..|+||||+++++|..++.. ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~-------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHT-------DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcc
Confidence 89999999999999988864 3689999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
|+++.... .........|++.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 146 g~~~~~~~--------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~ 203 (324)
T cd05589 146 GLCKEGMG--------FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPG 203 (324)
T ss_pred cCCccCCC--------CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCC
Confidence 99864321 11123346789999999999999999999999999999999999999975
No 106
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=7.8e-36 Score=321.43 Aligned_cols=251 Identities=33% Similarity=0.557 Sum_probs=190.9
Q ss_pred CCCceeeccceEEEEEEEC----CCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 703 SSNMIGQGSFGFVYRGNLG----ENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 703 ~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+.+.||.|.||.||+|.+. ..+..|+||++..... ...+.+.+|++.+++++||||++++|+|. ..+..+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~-----~~~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI-----ENEPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE-----SSSSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccc-----cccccc
Confidence 3478999999999999997 4467899999964333 23578999999999999999999999985 335589
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++|+|.+++..... ..+++.++..|+.||+.||+|||++ +++||||+++||++++++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~L~~~~~----~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~ 150 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNK----EPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLS 150 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCT----TTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTG
T ss_pred cccccccccccccccccccc----ccccccccccccccccccccccccc---cccccccccccccccccccccccccccc
Confidence 99999999999999998622 4789999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
......... ...........|+|||.+.+..++.++||||||+++|||++ |+.||...... .
T Consensus 151 ~~~~~~~~~------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~-----~------ 213 (259)
T PF07714_consen 151 RPISEKSKY------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE-----E------ 213 (259)
T ss_dssp EETTTSSSE------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH-----H------
T ss_pred ccccccccc------ccccccccccccccccccccccccccccccccccccccccccccccccccccc-----c------
Confidence 865221111 11233446789999999998889999999999999999999 78888653111 1
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
..+.+....... ....++..+.+++.+||+.||++|||+.|++++|
T Consensus 214 ---~~~~~~~~~~~~----------------~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 214 ---IIEKLKQGQRLP----------------IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---HHHHHHTTEETT----------------SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---ccccccccccce----------------eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 001111000000 0012345688999999999999999999999986
No 107
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.7e-35 Score=352.11 Aligned_cols=272 Identities=23% Similarity=0.304 Sum_probs=206.1
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.++||+|+||.||+|.+..+++.||+|++..... ...+++.+|++++++++||||+++++++. +.+.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~-----d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS-----DGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe-----eCCE
Confidence 589999999999999999999998999999999874322 22457899999999999999999999864 4478
Q ss_pred EEEEEeeccCCCHHHHhhccccc-----cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceE
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQ-----LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAH 850 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~-----~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 850 (1013)
.++||||+++++|.+++...... ......++.+++.++.||+.||+|||++ ||+||||||+||+++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEE
Confidence 89999999999999998753211 0113466788899999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCcc----------ccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 851 VGDFGLARFLPPCSPATI----------LETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 851 l~DFG~a~~~~~~~~~~~----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
|+|||+++.......... ...........||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 999999986622111000 0011112345799999999999999999999999999999999999999965
Q ss_pred cCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-CHHHHHH
Q 001782 921 MFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-QMTDVVA 999 (1013)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~ 999 (1013)
......... ....+|... ....+.+..+.+++.+|++.||++|| +++++.+
T Consensus 234 ~~~~ki~~~-----------------~~i~~P~~~-----------~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 234 KKGRKISYR-----------------DVILSPIEV-----------APYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred cchhhhhhh-----------------hhccChhhc-----------cccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 211100000 000011000 00113345678899999999999996 6677777
Q ss_pred HHHHhhh
Q 001782 1000 KLCSARK 1006 (1013)
Q Consensus 1000 ~L~~~~~ 1006 (1013)
.|+...+
T Consensus 286 ~Le~~lq 292 (932)
T PRK13184 286 DLEPHLQ 292 (932)
T ss_pred HHHHHHh
Confidence 7777644
No 108
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.2e-35 Score=336.39 Aligned_cols=257 Identities=19% Similarity=0.245 Sum_probs=200.1
Q ss_pred hhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCcc
Q 001782 695 SKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFE 771 (1013)
Q Consensus 695 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 771 (1013)
....++|++.++||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++ .
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-----~ 113 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-----Q 113 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----e
Confidence 345678999999999999999999999999999999996422 22334578899999999999999999985 4
Q ss_pred ccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEE
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHV 851 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 851 (1013)
++...++||||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~l~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL 183 (370)
T cd05596 114 DDKYLYMVMEYMPGGDLVNLMSNY-------DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKL 183 (370)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEE
Confidence 557899999999999999998653 578889999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCCCCcccccccccccccccCCC----CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCcc
Q 001782 852 GDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG----DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLT 927 (1013)
Q Consensus 852 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~ 927 (1013)
+|||++........ .......||+.|+|||++.+. .++.++|||||||++|||++|+.||......
T Consensus 184 ~DfG~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--- 253 (370)
T cd05596 184 ADFGTCMKMDANGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--- 253 (370)
T ss_pred EeccceeeccCCCc-------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH---
Confidence 99999975532111 112345799999999998653 4788999999999999999999999753110
Q ss_pred HHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCC--CCCHHHHHHH
Q 001782 928 LHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSE--RIQMTDVVAK 1000 (1013)
Q Consensus 928 ~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 1000 (1013)
.. ...+.... .. .. .+.....+..+.+++.+|++.+|++ ||++.|+++.
T Consensus 254 -~~---------~~~i~~~~----~~--~~--------~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 254 -GT---------YSKIMDHK----NS--LT--------FPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred -HH---------HHHHHcCC----Cc--CC--------CCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 00 11111100 00 00 0000012345778999999999988 9999999754
No 109
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.8e-35 Score=316.00 Aligned_cols=252 Identities=28% Similarity=0.437 Sum_probs=197.8
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
++|++.+.||+|+||.||+|++. ++..+|+|.+... ....+.+.+|++++++++||||+++++++. .....++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCT-----QQKPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEc-----cCCCEEE
Confidence 56888999999999999999886 4567999987633 233467889999999999999999999864 4467899
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
||||+++|+|.+++.... ..+++..++.++.|++.|++|||++ +++||||||+||++++++.+||+|||.++
T Consensus 77 v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~ 148 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQ-----GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcc
Confidence 999999999999987542 3578999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCC
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
....... .......++..|+|||++.+..++.++||||||+++|||++ |+.||...... ..
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-----~~------ 210 (256)
T cd05114 149 YVLDDEY-------TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-----EV------ 210 (256)
T ss_pred ccCCCce-------eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-----HH------
Confidence 5432111 01122345678999999988899999999999999999999 89998653110 00
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
...+... ....++. ..+..+.+++.+||+.+|++||+++|+++.|.
T Consensus 211 --~~~i~~~----~~~~~~~-------------~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 211 --VEMISRG----FRLYRPK-------------LASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred --HHHHHCC----CCCCCCC-------------CCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0111100 0000000 11345789999999999999999999998863
No 110
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.4e-35 Score=328.99 Aligned_cols=239 Identities=25% Similarity=0.339 Sum_probs=187.5
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
++||+|+||.||+|++..+++.||+|+++... ....+.+..|..++... +||||+++++++ ..++..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 46999999999999999899999999997432 22334556677777654 899999999985 3457899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~gg~L~~~~~~~------~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 76 EYLNGGDLMFHIQSS------GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred cCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 999999999998765 4689999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhH
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKV 940 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~ 940 (1013)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-----~~--------- 204 (316)
T cd05592 147 MNGE--------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-----EL--------- 204 (316)
T ss_pred CCCC--------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-----HH---------
Confidence 2211 1233456899999999999999999999999999999999999999753211 00
Q ss_pred HHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 001782 941 MEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTD 996 (1013)
Q Consensus 941 ~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 996 (1013)
....... ++... ......+.+++.+||+.||++||++.+
T Consensus 205 ---~~~i~~~----~~~~~----------~~~~~~~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 205 ---FDSILND----RPHFP----------RWISKEAKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred ---HHHHHcC----CCCCC----------CCCCHHHHHHHHHHccCCHHHcCCChH
Confidence 0000000 00000 012344678899999999999998753
No 111
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.4e-35 Score=325.65 Aligned_cols=276 Identities=18% Similarity=0.297 Sum_probs=200.4
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
++|.+.++||+|+||.||+|++..++..||+|+++.... .....+.+|++++++++||||+++++++. .++..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-----TDKSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-----eCCeEE
Confidence 579999999999999999999998999999999874432 23346788999999999999999999964 447789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||++ +++.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 81 LVFEYLD-KDLKQYMDDCG-----NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred EEEeCCC-CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccc
Confidence 9999998 58888886542 3578899999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+...... .......+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ..........
T Consensus 152 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~ 222 (309)
T cd07872 152 RAKSVPT--------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHLIFRLLG 222 (309)
T ss_pred eecCCCc--------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhC
Confidence 7532211 11223457899999998765 468899999999999999999999997642221 1111111110
Q ss_pred -C-hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 -P-EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 -~-~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+ ......+...........+... ..............+.+++.+|++.||.+|||+.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 223 TPTEETWPGISSNDEFKNYNFPKYK--PQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred CCCHHHHhhhcchhhhhhhhcCccC--CCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0 0000000000000000000000 00001111223456789999999999999999999986
No 112
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.9e-35 Score=329.31 Aligned_cols=242 Identities=24% Similarity=0.318 Sum_probs=190.2
Q ss_pred CceeeccceEEEEEEEC---CCCeEEEEEEEeecc----ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 705 NMIGQGSFGFVYRGNLG---ENEMAVAVKVMNLKQ----RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
++||+|+||.||+|+.. .+++.||+|+++... ......+.+|+++++.++||||+++++++. .++..+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-----~~~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQ-----TGGKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEe-----cCCeEE
Confidence 68999999999999873 467899999987432 222345788999999999999999999853 457899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 77 lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 77 LILEYLSGGELFMHLERE------GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred EEEeCCCCchHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 999999999999999765 4678889999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 148 ~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~------ 208 (323)
T cd05584 148 KESIHE--------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KT------ 208 (323)
T ss_pred eecccC--------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HH------
Confidence 743211 11123456899999999999989999999999999999999999999753110 00
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-----CHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-----QMTDVVA 999 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 999 (1013)
...+........ ......+.+++.+|++.||++|| ++.++++
T Consensus 209 --~~~~~~~~~~~~------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 209 --IDKILKGKLNLP------------------PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred --HHHHHcCCCCCC------------------CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 111111100000 01234567888999999999999 7777765
No 113
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5.3e-35 Score=318.95 Aligned_cols=259 Identities=22% Similarity=0.372 Sum_probs=200.8
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCe----EEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEM----AVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
++|++.+.||+|+||+||+|.+..++. .|++|.+..... ....++..|+..+++++||||+++++++. .
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~------~ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP------G 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC------C
Confidence 578889999999999999999876665 467777653322 22356778888999999999999999863 2
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++++||+++|+|.+++.... +.+++..+..++.||+.|++|||++ +++||||||+||++++++.+||+|
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~D 152 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHR-----DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIAD 152 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcC
Confidence 34678999999999999997643 3689999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~ 932 (1013)
||.++...+.... .......++..|+|||++.++.++.++|||||||++||+++ |..||......
T Consensus 153 fg~~~~~~~~~~~------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-------- 218 (279)
T cd05111 153 FGVADLLYPDDKK------YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-------- 218 (279)
T ss_pred CccceeccCCCcc------cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------
Confidence 9999865432211 11223456788999999998999999999999999999998 99998653111
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARKI 1007 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 1007 (1013)
...+++... .++... ..++..+.+++.+||+.||++|||+.|+++.|..+.+.
T Consensus 219 ------~~~~~~~~~------~~~~~~----------~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 219 ------EVPDLLEKG------ERLAQP----------QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred ------HHHHHHHCC------CcCCCC----------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 111111110 011000 01233467889999999999999999999999887653
No 114
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.7e-35 Score=324.16 Aligned_cols=276 Identities=25% Similarity=0.376 Sum_probs=205.4
Q ss_pred hccCCCCCceeeccceEEEEEEE----CCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNL----GENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
..+|++.+.||+|+||.||+|.. ..++..||+|.+........+.+.+|++++++++||||+++++++.. .+.
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~ 79 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGR 79 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc---CCC
Confidence 34788999999999999999984 45678899999875555455678999999999999999999998753 234
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++||||+++++|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||++++++.+||+|
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~d 151 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR-----ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGD 151 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECC
Confidence 56899999999999999997542 3588999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||+++.......... ......++..|+|||++.+..++.++|||||||++|||++|..|+...... ......
T Consensus 152 fg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~ 223 (284)
T cd05081 152 FGLTKVLPQDKEYYK-----VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMG 223 (284)
T ss_pred CcccccccCCCccee-----ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhcc
Confidence 999986643221110 011123445699999999889999999999999999999988776432110 000000
Q ss_pred hhCC--hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhh
Q 001782 934 MALP--EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSAR 1005 (1013)
Q Consensus 934 ~~~~--~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1005 (1013)
.... .....+.+ .+... .++. ....++..+.+++.+||+.+|++|||+.||+++|++++
T Consensus 224 ~~~~~~~~~~~~~~-~~~~~--~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 224 NDKQGQMIVYHLIE-LLKNN--GRLP----------APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred cccccccchHHHHH-HHhcC--CcCC----------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 0000 00001100 00000 0000 01123456889999999999999999999999998763
No 115
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.5e-35 Score=329.34 Aligned_cols=194 Identities=27% Similarity=0.369 Sum_probs=167.5
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeec---cccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLK---QRGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
++||+|+||+||+|++..+++.||+|++... .....+.+..|.++++.. +||||+++++++ ...+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~-----~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF-----QTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE-----EcCCEEEEEE
Confidence 4699999999999999989999999998743 223345677888888876 699999999985 4457899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 Ey~~~g~L~~~i~~~------~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 76 EFVNGGDLMFHIQKS------RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred cCCCCchHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 999999999998765 4689999999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (320)
T cd05590 147 IFN--------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA 198 (320)
T ss_pred CcC--------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 211 1123345789999999999999999999999999999999999999975
No 116
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.6e-35 Score=334.12 Aligned_cols=250 Identities=23% Similarity=0.341 Sum_probs=192.7
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.++|+..++||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++.++|+||+++++++ ...+..
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 147 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNGEI 147 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCCeE
Confidence 4567788999999999999999998999999999864432 2345688999999999999999999985 455788
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+++++|.+.. ..++..+..++.||+.||+|||++ +|+||||||+||++++++.+||+|||+
T Consensus 148 ~lv~e~~~~~~L~~~~----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~ 214 (353)
T PLN00034 148 QVLLEFMDGGSLEGTH----------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGV 214 (353)
T ss_pred EEEEecCCCCcccccc----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccccc
Confidence 9999999999986432 345678889999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCC-----CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHH
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-----GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEF 931 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~ 931 (1013)
++.+.... .......||..|+|||++.. ...+.++|||||||++|||++|+.||...... .+...
T Consensus 215 ~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~ 284 (353)
T PLN00034 215 SRILAQTM--------DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASL 284 (353)
T ss_pred ceeccccc--------ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHH
Confidence 97653211 11234568999999998743 23456899999999999999999999732111 11111
Q ss_pred HHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 932 AKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
+.......+.. ....+...+.+++.+||+.||++|||+.|+++.
T Consensus 285 ------------~~~~~~~~~~~-------------~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 285 ------------MCAICMSQPPE-------------APATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ------------HHHHhccCCCC-------------CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000000 001234568899999999999999999999874
No 117
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=9e-36 Score=332.31 Aligned_cols=243 Identities=23% Similarity=0.297 Sum_probs=192.3
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEe
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
+.||+|+||.||+|++..+++.||+|++.... ......+.+|+++++.++||||+++++++ ...+..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~-----~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EcCCEEEEEEe
Confidence 46999999999999999999999999997432 22345678899999999999999999985 44578999999
Q ss_pred eccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 782 YMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHH-HCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
|+++|+|.+++... ..+++.++..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 76 YANGGELFFHLSRE------RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred CCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence 99999999988765 468999999999999999999997 7 9999999999999999999999999998743
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhH
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKV 940 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~ 940 (1013)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~-----~~--------- 204 (325)
T cd05594 147 IKD--------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KL--------- 204 (325)
T ss_pred CCC--------CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH-----HH---------
Confidence 211 11123456999999999999999999999999999999999999999653111 00
Q ss_pred HHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-----CHHHHHHH
Q 001782 941 MEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-----QMTDVVAK 1000 (1013)
Q Consensus 941 ~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 1000 (1013)
.+.+. ...+ +. .......+.+++.+|++.||++|+ ++.++++.
T Consensus 205 ~~~i~---~~~~--~~------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 205 FELIL---MEEI--RF------------PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHh---cCCC--CC------------CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 00000 0000 00 001234567888999999999996 88888753
No 118
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.7e-35 Score=336.63 Aligned_cols=279 Identities=22% Similarity=0.265 Sum_probs=202.0
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.++||+|+||.||+|.+..+++.||+|++.... ....+++.+|+++++.++||||+++++++...........+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788999999999999999998899999999986332 22345788999999999999999999997644322234789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+. ++|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP------QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred EEeeccc-cCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccce
Confidence 9999998 6888887654 4689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+....... .......+++.|+|||++.+. .++.++||||+||++|||++|+.||...... ...........
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~g 222 (372)
T cd07853 151 RVEEPDES-------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-QQLDLITDLLG 222 (372)
T ss_pred eecccCcc-------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcC
Confidence 75432211 112334678999999998874 4789999999999999999999999764221 11111111111
Q ss_pred ChhHHHhh------hhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 937 PEKVMEIV------DPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 937 ~~~~~~~i------~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.+...++. ...+...+...+. .........+....+.+++.+|++.||++|||+.|+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 223 TPSLEAMRSACEGARAHILRGPHKPPS----LPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred CCCHHHHHHhhHHHHHHHHhCCCCCCc----hHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 11111100 0000000100000 000000001224567899999999999999999999864
No 119
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.4e-35 Score=322.67 Aligned_cols=253 Identities=25% Similarity=0.335 Sum_probs=199.1
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.|++.++||+|+||+||++.+..+++.||+|++.... ......+.+|+.++++++||||+++++.+ ..++..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeee-----cCCCeE
Confidence 4788899999999999999998889999999986432 12234577899999999999999999985 344789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+++|+|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.++|+|||+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGN----PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 999999999999998865422 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+....... ......|+..|+|||++.+..++.++||||+||++|||++|+.||...... .....
T Consensus 149 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~------ 212 (285)
T cd05605 149 AVEIPEGE---------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREE------ 212 (285)
T ss_pred ceecCCCC---------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHH------
Confidence 87543211 122346899999999999889999999999999999999999999753211 00000
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-----CHHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-----QMTDVVAK 1000 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 1000 (1013)
....+.. .+ +. .....+..+.+++.+||+.||++|| +++++++.
T Consensus 213 ---~~~~~~~----~~---~~----------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 213 ---VERRVKE----DQ---EE----------YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ---HHHHhhh----cc---cc----------cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 0010100 00 00 0012345678899999999999999 88888653
No 120
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1e-35 Score=339.09 Aligned_cols=209 Identities=24% Similarity=0.328 Sum_probs=175.0
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++.+ .+++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCE
Confidence 37899999999999999999999999999999986332 22345688999999999999999999985 45578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++|+|.+++... +.+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRL------GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 99999999999999999765 4688899999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCcc-----------------------------------ccCCCCCcccccccccccccccCCCCCCcccc
Q 001782 856 LARFLPPCSPATI-----------------------------------LETPSSSTGIKGTVGYVAPEYGMGGDMSATGD 900 (1013)
Q Consensus 856 ~a~~~~~~~~~~~-----------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 900 (1013)
+|..+........ ...........||+.|+|||++.+..++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 9853321000000 00001112457999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCCCCCc
Q 001782 901 VYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 901 IwSlG~il~ell~G~~pf~~~ 921 (1013)
||||||++|||++|+.||...
T Consensus 227 iwSlGvilyell~G~~Pf~~~ 247 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLAD 247 (376)
T ss_pred eeeccceeeehhhCCCCCCCC
Confidence 999999999999999999753
No 121
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.7e-35 Score=320.99 Aligned_cols=255 Identities=19% Similarity=0.299 Sum_probs=201.1
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
.++|++.+.||+|+||.||+|++..+++.||+|++..........+.+|+.++++++||||+++++++. .++..+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-----~~~~~~ 82 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL-----SREKLW 82 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEE-----eCCEEE
Confidence 458999999999999999999998899999999997655445567889999999999999999999864 346789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++... ..+++.++..++.|++.|++|||+. +|+|||+||+||+++.++.+||+|||++
T Consensus 83 iv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~ 153 (267)
T cd06646 83 ICMEYCGGGSLQDIYHVT------GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVA 153 (267)
T ss_pred EEEeCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccc
Confidence 999999999999998754 4688999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM---GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
..+.... .......|+..|+|||.+. ...++.++||||+||++|||++|+.||.........
T Consensus 154 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~------- 218 (267)
T cd06646 154 AKITATI--------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL------- 218 (267)
T ss_pred eeecccc--------cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-------
Confidence 8653211 1123356889999999874 345788999999999999999999998643211000
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
..+..... .+ . ........+..+.+++.+||+.+|++||+++++++.
T Consensus 219 ------~~~~~~~~--~~----~-------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 219 ------FLMSKSNF--QP----P-------KLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred ------eeeecCCC--CC----C-------CCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 00000000 00 0 000001223567899999999999999999999874
No 122
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.8e-35 Score=329.74 Aligned_cols=199 Identities=26% Similarity=0.367 Sum_probs=170.3
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCC-ccceEEEEeecCCccccce
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHR-NLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~ 775 (1013)
+|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+..|.++++.++|+ +|+++++++ ...+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcCCE
Confidence 5888999999999999999999899999999997432 23445678899999999765 577787774 34578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQV------GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecC
Confidence 99999999999999999765 4688999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
++...... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 147 ~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (324)
T cd05587 147 MCKENIFG--------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 203 (324)
T ss_pred cceecCCC--------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 98642211 1112345689999999999999999999999999999999999999975
No 123
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.4e-35 Score=337.78 Aligned_cols=208 Identities=22% Similarity=0.331 Sum_probs=174.4
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.++||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++ .+...
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF-----QDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCe
Confidence 47899999999999999999999999999999986432 22345688899999999999999999985 45578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.|+||||+++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~------~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKY------DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecc
Confidence 99999999999999999765 4688999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCcc----cc----C-------------------------------CCCCcccccccccccccccCCCCCC
Q 001782 856 LARFLPPCSPATI----LE----T-------------------------------PSSSTGIKGTVGYVAPEYGMGGDMS 896 (1013)
Q Consensus 856 ~a~~~~~~~~~~~----~~----~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~ 896 (1013)
+++.+........ .. . ........||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 9974322110000 00 0 0000124699999999999999999
Q ss_pred cccchHHHHHHHHHHHhCCCCCCC
Q 001782 897 ATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 897 ~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
.++|||||||++|||++|..||..
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~ 250 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCS 250 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCC
Confidence 999999999999999999999965
No 124
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.6e-35 Score=334.19 Aligned_cols=282 Identities=22% Similarity=0.229 Sum_probs=205.8
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCC-cccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSID-FEEV 773 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 773 (1013)
..++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.+++.++||||+++++++.... ....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3578999999999999999999999899999999986432 233456789999999999999999999875432 2334
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++||||++ +++.+++.. .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 169 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 169 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh--------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEe
Confidence 56899999998 578777743 467889999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||+++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||...... ..+.....
T Consensus 170 fG~a~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~~~~ 239 (364)
T cd07875 170 FGLARTAGTS---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIE 239 (364)
T ss_pred CCCccccCCC---------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence 9999754321 1123456899999999999999999999999999999999999999764221 11112111
Q ss_pred hhC--ChhHHHhhhhhhccchhhhhccCCCCch----------hHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 934 MAL--PEKVMEIVDPLLLLDLEARASNCGSHRT----------EIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 934 ~~~--~~~~~~~i~~~l~~~~~~R~~~~~~~~~----------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
... .+.....+.+........|+........ ...........+.+++.+|++.||.+|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 240 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred hcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 111 1111111221111111222221110000 000001123467899999999999999999999874
No 125
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4.1e-35 Score=319.76 Aligned_cols=263 Identities=24% Similarity=0.417 Sum_probs=201.5
Q ss_pred hhccCCCCCceeeccceEEEEEEECC-----CCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGE-----NEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDF 770 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 770 (1013)
..++|++.+.||+|+||.||+|.+.+ ++..||+|++..... ....++.+|+.+++.++||||+++++++.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~---- 79 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS---- 79 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----
Confidence 46789999999999999999998742 356799998863322 23456889999999999999999999863
Q ss_pred cccceEEEEEeeccCCCHHHHhhccccccc----cCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC
Q 001782 771 EEVDFKAIVYEYMECGSLEDWLHQSNDQLE----VGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD 846 (1013)
Q Consensus 771 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~----~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 846 (1013)
.....++||||+++++|.+++...+.... ...+++.++..++.|++.|++|||+. +++||||||+||+++++
T Consensus 80 -~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 80 -QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 155 (277)
T ss_pred -CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCC
Confidence 44678999999999999999976432211 13467889999999999999999999 99999999999999999
Q ss_pred CceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCC
Q 001782 847 MVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDG 925 (1013)
Q Consensus 847 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~ 925 (1013)
+.+||+|||+++......... ......++..|+|||++.++.++.++|||||||++|||++ |..||......
T Consensus 156 ~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~- 228 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDYYR------KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE- 228 (277)
T ss_pred CCEEECCCCCccccCCcceee------cCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence 999999999987553221111 1122345788999999998899999999999999999999 78888653111
Q ss_pred ccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 926 LTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
.... ........ + . ...++..+.+++.+|++.||++|||+.|+++.|++
T Consensus 229 ----~~~~--------~~~~~~~~-~---~-------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 229 ----QVLR--------FVMEGGLL-D---K-------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred ----HHHH--------HHHcCCcC-C---C-------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1100 00000000 0 0 01234568899999999999999999999998863
No 126
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=4e-35 Score=327.30 Aligned_cols=194 Identities=24% Similarity=0.346 Sum_probs=168.1
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
++||+|+||.||+|++..+++.||+|+++... ....+.+..|..+++.+ +||||+++++++ ......++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE-----EcCCEEEEEE
Confidence 46999999999999999999999999997432 22345578899999988 799999999985 3457899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++|+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~~~~~------~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 146 (329)
T cd05588 76 EFVSGGDLMFHMQRQ------RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccc
Confidence 999999999988765 4789999999999999999999999 9999999999999999999999999998642
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
.. .........||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 147 ~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 198 (329)
T cd05588 147 IR--------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred cc--------CCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence 11 11123345789999999999999999999999999999999999999964
No 127
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.7e-35 Score=318.07 Aligned_cols=258 Identities=29% Similarity=0.470 Sum_probs=203.6
Q ss_pred hccCCCCCceeeccceEEEEEEECCC---CeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGEN---EMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
.++|++.+.||+|+||.||+|.+... ...||+|+++.... ....++.+|+.++++++||||+++++++. ..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT-----KS 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEe-----cC
Confidence 45799999999999999999998543 46799999874432 23457889999999999999999999853 44
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
+..++||||+++++|.+++.... +.+++.++++++.|++.|++|||++ +|+||||||+||++++++.+||+|
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~d 149 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLREND-----GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSD 149 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECc
Confidence 67899999999999999997642 3689999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~ 932 (1013)
||+++......... ......++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 150 fg~~~~~~~~~~~~------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~-------- 215 (266)
T cd05033 150 FGLSRRLEDSEATY------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ-------- 215 (266)
T ss_pred cchhhcccccccce------eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--------
Confidence 99998764211110 1112335678999999999999999999999999999998 99998653211
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
...+.+...... + ....++..+.+++.+|++.+|++||++.||++.|+++
T Consensus 216 ------~~~~~~~~~~~~-~---------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 216 ------DVIKAVEDGYRL-P---------------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ------HHHHHHHcCCCC-C---------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 011111100000 0 0012345678999999999999999999999999875
No 128
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=325.60 Aligned_cols=196 Identities=31% Similarity=0.444 Sum_probs=173.2
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.|.-.+.||.|+||.||.|++..+.+.||||.+..... +...++.+|+..+++++|||++.+-|+|. .+...
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL-----re~Ta 101 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL-----REHTA 101 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee-----ccchH
Confidence 45556789999999999999999999999999975433 33467899999999999999999999853 34668
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
|+|||||- |+-.|++.-.+ +++.+.++..|+.+.+.||+|||++ +.||||||+.|||+++.|.||++|||.
T Consensus 102 WLVMEYCl-GSAsDlleVhk-----KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGS 172 (948)
T KOG0577|consen 102 WLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGS 172 (948)
T ss_pred HHHHHHHh-ccHHHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccc
Confidence 99999998 89999988764 5789999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM---GGDMSATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
|..+.+ ...++|||.|||||++. .+.|+-++||||+|++..|+..+++|+..+
T Consensus 173 Asi~~P------------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM 228 (948)
T KOG0577|consen 173 ASIMAP------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 228 (948)
T ss_pred hhhcCc------------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc
Confidence 986644 45678999999999875 468999999999999999999999998764
No 129
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.7e-35 Score=329.75 Aligned_cols=238 Identities=26% Similarity=0.320 Sum_probs=186.2
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHH-HHhcCCCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECE-ALRNIRHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
+.||+|+||+||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++ ...+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~-----~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE-----EeCCEEEEEE
Confidence 46999999999999999999999999997432 122334555554 56788999999999985 3457899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++|+|.+++... ..+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 76 DYVNGGELFFHLQRE------RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred cCCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 999999999998765 4688999999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhH
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKV 940 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~ 940 (1013)
.. .........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .
T Consensus 147 ~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~----------- 202 (323)
T cd05575 147 IE--------HSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----A----------- 202 (323)
T ss_pred cc--------CCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----H-----------
Confidence 21 11123345789999999999999999999999999999999999999975311 1
Q ss_pred HHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHH
Q 001782 941 MEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMT 995 (1013)
Q Consensus 941 ~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 995 (1013)
+..+.........++ ..+..+.+++.+|++.||++||++.
T Consensus 203 -~~~~~i~~~~~~~~~--------------~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 203 -EMYDNILNKPLRLKP--------------NISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred -HHHHHHHcCCCCCCC--------------CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 111111111110000 1134567888899999999999885
No 130
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.1e-35 Score=345.37 Aligned_cols=280 Identities=21% Similarity=0.273 Sum_probs=197.8
Q ss_pred hhhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCC------CccceEEEEe
Q 001782 692 ADLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRH------RNLIKIITVC 765 (1013)
Q Consensus 692 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~ 765 (1013)
.++....++|++.++||+|+||+||+|++..+++.||||+++... ...+....|+++++.++| ++++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344456789999999999999999999999899999999996432 223445667777777654 4588888886
Q ss_pred ecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCceEec
Q 001782 766 SSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHH-HCHPPIVHGDLKPSNVLLD 844 (1013)
Q Consensus 766 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~ivH~Dlkp~NIll~ 844 (1013)
. .+..+.|+|||++. ++|.+++... +.+++.++..|+.||+.||+|||+ . |||||||||+|||++
T Consensus 201 ~----~~~~~~~iv~~~~g-~~l~~~l~~~------~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~ 266 (467)
T PTZ00284 201 Q----NETGHMCIVMPKYG-PCLLDWIMKH------GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILME 266 (467)
T ss_pred E----cCCceEEEEEeccC-CCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEe
Confidence 4 23467899999984 8899888765 468999999999999999999997 6 999999999999998
Q ss_pred CCC----------------ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHH
Q 001782 845 HDM----------------VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILL 908 (1013)
Q Consensus 845 ~~~----------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il 908 (1013)
.++ .+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~-----------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 335 (467)
T PTZ00284 267 TSDTVVDPVTNRALPPDPCRVRICDLGGCCDER-----------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCII 335 (467)
T ss_pred cCCcccccccccccCCCCceEEECCCCccccCc-----------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHH
Confidence 765 49999999875321 113346789999999999999999999999999999
Q ss_pred HHHHhCCCCCCCcCCCCccHHHHHHh--hCChhH---------HHhhhhhhccchhhhhccCC-CCc-hhHHHHHHHHHH
Q 001782 909 LEMFTRRRPTDNMFNDGLTLHEFAKM--ALPEKV---------MEIVDPLLLLDLEARASNCG-SHR-TEIAKIEECLVA 975 (1013)
Q Consensus 909 ~ell~G~~pf~~~~~~~~~~~~~~~~--~~~~~~---------~~~i~~~l~~~~~~R~~~~~-~~~-~~~~~~~~~~~~ 975 (1013)
|||++|+.||...... .....+... ..+..+ .++.+......+...+.... ... ..... .-....
T Consensus 336 ~elltG~~pf~~~~~~-~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 413 (467)
T PTZ00284 336 YELYTGKLLYDTHDNL-EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVRE-VIRDDL 413 (467)
T ss_pred HHHHhCCCCCCCCChH-HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhh-hhchHH
Confidence 9999999999763221 111111111 112111 11111110000000000000 000 00000 011346
Q ss_pred HHHHhhhcccCCCCCCCCHHHHHH
Q 001782 976 IVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 976 l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+.+++.+||+.||++|||++|+++
T Consensus 414 ~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 414 LCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHHHHHhCCcChhhCCCHHHHhc
Confidence 789999999999999999999986
No 131
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.5e-35 Score=318.54 Aligned_cols=255 Identities=27% Similarity=0.461 Sum_probs=201.7
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
.++|++.++||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|+.++++++||||+++++++. ..+..+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 77 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT-----KEEPIY 77 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEc-----CCCCcE
Confidence 468999999999999999999976 55679999876432 23567899999999999999999999853 456789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
++|||+++++|.+++..... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 78 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~ 150 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEG----GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLA 150 (261)
T ss_pred EEEecCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccc
Confidence 99999999999999976432 4688899999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
........ .......++..|+|||++.++.++.++|||||||++|+|++ |+.||......
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~------------ 211 (261)
T cd05072 151 RVIEDNEY-------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS------------ 211 (261)
T ss_pred eecCCCce-------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH------------
Confidence 86532111 01122345678999999998899999999999999999998 99998653111
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
.....+.... ++. .....+..+.+++.+|++.+|++||+++++.+.|++
T Consensus 212 --~~~~~~~~~~------~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 212 --DVMSALQRGY------RMP----------RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred --HHHHHHHcCC------CCC----------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0001011000 000 001123457889999999999999999999999876
No 132
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.6e-35 Score=333.10 Aligned_cols=282 Identities=21% Similarity=0.242 Sum_probs=202.8
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCC-cccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSID-FEEV 773 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 773 (1013)
..++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.... ....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4579999999999999999999998889999999986432 223456788999999999999999999875432 2234
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++||||++ +++.+++.. .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|
T Consensus 95 ~~~~lv~e~~~-~~l~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~D 162 (355)
T cd07874 95 QDVYLVMELMD-ANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 162 (355)
T ss_pred ceeEEEhhhhc-ccHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEee
Confidence 56899999998 577776643 478889999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||+++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||....... .......
T Consensus 163 fg~~~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~ 232 (355)
T cd07874 163 FGLARTAGTS---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIE 232 (355)
T ss_pred CcccccCCCc---------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 9999754321 11234568999999999999999999999999999999999999997532111 1111111
Q ss_pred hhC--ChhHHHhhhhhhccchhhhhccCCC----------CchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 934 MAL--PEKVMEIVDPLLLLDLEARASNCGS----------HRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 934 ~~~--~~~~~~~i~~~l~~~~~~R~~~~~~----------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
... .......+.+........++..... ..............+.+++.+|++.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 110 0000000000000000011100000 000000011123467899999999999999999999874
No 133
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.7e-35 Score=329.48 Aligned_cols=242 Identities=24% Similarity=0.321 Sum_probs=191.3
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
++||+|+||.||+|++..+++.||+|++.... ....+.+..|.++++.+ +||+|+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF-----QTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCeEEEEE
Confidence 46999999999999999899999999997432 23345577888888866 799999999985 3457899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++++|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 76 E~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 76 EYVNGGDLMFQIQRS------RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred eCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 999999999998765 4688999999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhH
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKV 940 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~ 940 (1013)
... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~-----~---------- 203 (321)
T cd05591 147 ILN--------GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED-----D---------- 203 (321)
T ss_pred ccC--------CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH-----H----------
Confidence 211 11133456899999999999999999999999999999999999999753211 0
Q ss_pred HHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-------CHHHHHH
Q 001782 941 MEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-------QMTDVVA 999 (1013)
Q Consensus 941 ~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-------s~~evl~ 999 (1013)
.+......++. -+ ......+.+++.+|++.||++|| ++.++++
T Consensus 204 --~~~~i~~~~~~-~p-------------~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 204 --LFESILHDDVL-YP-------------VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred --HHHHHHcCCCC-CC-------------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 00111100000 00 01134567889999999999999 7777764
No 134
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.4e-35 Score=333.37 Aligned_cols=206 Identities=22% Similarity=0.338 Sum_probs=175.6
Q ss_pred hhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCC
Q 001782 693 DLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSID 769 (1013)
Q Consensus 693 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 769 (1013)
.+....++|++.++||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~---- 112 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF---- 112 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE----
Confidence 34445678999999999999999999999999999999986322 22335578999999999999999999985
Q ss_pred ccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCce
Q 001782 770 FEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVA 849 (1013)
Q Consensus 770 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 849 (1013)
..+...++||||+++|+|.+++... .+++.++..++.||+.||+|||++ +|+||||||+||++++++.+
T Consensus 113 -~~~~~~~lv~Ey~~gg~L~~~l~~~-------~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~ 181 (370)
T cd05621 113 -QDDKYLYMVMEYMPGGDLVNLMSNY-------DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHL 181 (370)
T ss_pred -EcCCEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCE
Confidence 4557899999999999999999653 578889999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCccccCCCCCcccccccccccccccCCC----CCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 850 HVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG----DMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 850 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
||+|||+|........ .......||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 182 kL~DFG~a~~~~~~~~-------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~ 249 (370)
T cd05621 182 KLADFGTCMKMDETGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 249 (370)
T ss_pred EEEecccceecccCCc-------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence 9999999986532111 112345799999999998754 378899999999999999999999975
No 135
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.3e-35 Score=336.70 Aligned_cols=208 Identities=23% Similarity=0.335 Sum_probs=174.2
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
+|++.++||+|+||+||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++. +++..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~-----~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ-----DKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE-----eCCEE
Confidence 6888999999999999999999999999999987432 223456889999999999999999999954 45789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+++|+|.+++... +.+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~------~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRM------GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred EEEEeCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCC
Confidence 9999999999999999765 4688899999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCcc---------------------------------------ccCCCCCcccccccccccccccCCCCCCc
Q 001782 857 ARFLPPCSPATI---------------------------------------LETPSSSTGIKGTVGYVAPEYGMGGDMSA 897 (1013)
Q Consensus 857 a~~~~~~~~~~~---------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 897 (1013)
++.+........ ...........||+.|+|||++.+..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 864321100000 00000112357999999999999999999
Q ss_pred ccchHHHHHHHHHHHhCCCCCCCc
Q 001782 898 TGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 898 ~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
++||||+||++|||++|+.||...
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~ 251 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLAQ 251 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCCC
Confidence 999999999999999999999753
No 136
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.3e-35 Score=325.87 Aligned_cols=241 Identities=24% Similarity=0.339 Sum_probs=188.8
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
+.||+|+||.||+|++..+++.||+|+++... ....+.+..|..+++.. +||||+++++++. +.+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ-----TKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE-----eCCEEEEEE
Confidence 46999999999999999899999999997432 22345566788888764 8999999999853 457899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ey~~~g~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 76 EYLNGGDLMFHIQSC------HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred eCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 999999999999764 4688999999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhH
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKV 940 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~ 940 (1013)
... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----~~~-------- 205 (316)
T cd05619 147 MLG--------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-----ELF-------- 205 (316)
T ss_pred CCC--------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-----HHH--------
Confidence 211 11123456899999999999999999999999999999999999999753111 000
Q ss_pred HHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHH-HHH
Q 001782 941 MEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMT-DVV 998 (1013)
Q Consensus 941 ~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl 998 (1013)
+.+. ...+ ... ......+.+++.+|++.||++||++. ++.
T Consensus 206 -~~i~---~~~~----~~~----------~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 206 -QSIR---MDNP----CYP----------RWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred -HHHH---hCCC----CCC----------ccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 0000 0000 000 01123467888999999999999997 553
No 137
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.7e-35 Score=327.41 Aligned_cols=194 Identities=25% Similarity=0.355 Sum_probs=167.3
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++.++ +||||+++++++ ......++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEE-----EeCCEEEEEE
Confidence 47999999999999999999999999997432 22335577888888776 799999999985 3457899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++++|..++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~~~L~~~~~~~------~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 76 EYVNGGDLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 999999999988765 4689999999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 147 LRP--------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred cCC--------CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence 211 1112345789999999999999999999999999999999999999964
No 138
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.7e-35 Score=329.81 Aligned_cols=252 Identities=21% Similarity=0.257 Sum_probs=193.7
Q ss_pred cCCCCCceeeccceEEEEEEEC---CCCeEEEEEEEeecc----ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCcc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLG---ENEMAVAVKVMNLKQ----RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFE 771 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 771 (1013)
+|++.++||+|+||.||+|+.. .+++.||+|++.... ....+.+..|+.+++.+ +||+|+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF-----Q 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE-----e
Confidence 4888999999999999999874 467899999987422 22335678899999999 599999999884 4
Q ss_pred ccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEE
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHV 851 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 851 (1013)
..+..++||||+++|+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQR------DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEE
Confidence 557889999999999999999765 4689999999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHH
Q 001782 852 GDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHE 930 (1013)
Q Consensus 852 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~ 930 (1013)
+|||+++.+..... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||........ ...
T Consensus 147 ~DfG~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~ 218 (332)
T cd05614 147 TDFGLSKEFLSEEK-------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSE 218 (332)
T ss_pred eeCcCCccccccCC-------CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHH
Confidence 99999975432211 112345789999999998865 478899999999999999999999964322111 111
Q ss_pred HHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-----CHHHHHH
Q 001782 931 FAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-----QMTDVVA 999 (1013)
Q Consensus 931 ~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 999 (1013)
+.......++.- . ...+..+.+++.+|++.||++|| +++++++
T Consensus 219 ------------~~~~~~~~~~~~----~----------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 219 ------------VSRRILKCDPPF----P----------SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred ------------HHHHHhcCCCCC----C----------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 111111111100 0 01234567888899999999999 6667764
No 139
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7e-35 Score=317.51 Aligned_cols=248 Identities=23% Similarity=0.279 Sum_probs=192.5
Q ss_pred eeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeec
Q 001782 707 IGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYM 783 (1013)
Q Consensus 707 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 783 (1013)
||+|+||.||+++...+++.||+|++.... ....+.+..|++++++++||||+++++++ ..+...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEecC
Confidence 699999999999999899999999986322 12234456799999999999999999985 4457899999999
Q ss_pred cCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCC
Q 001782 784 ECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPC 863 (1013)
Q Consensus 784 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 863 (1013)
++++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 76 ~g~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 76 NGGDLKYHIYNVGE----RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred CCCCHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 99999988865432 3588999999999999999999999 9999999999999999999999999998755321
Q ss_pred CCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHh
Q 001782 864 SPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEI 943 (1013)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1013)
. ......|+..|+|||++.+..++.++||||+||++|||++|+.||........ .. ++
T Consensus 149 ~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-~~------------~~ 206 (277)
T cd05607 149 K---------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-KE------------EL 206 (277)
T ss_pred c---------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-HH------------HH
Confidence 1 12234688999999999998999999999999999999999999975321110 00 11
Q ss_pred hhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 944 VDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 944 i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
........... .......++.+++.+||+.||++||+++|+++..
T Consensus 207 ~~~~~~~~~~~-------------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 207 KRRTLEDEVKF-------------EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred HHHhhcccccc-------------ccccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 11111000000 0011234578999999999999999998776433
No 140
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.8e-35 Score=325.55 Aligned_cols=241 Identities=23% Similarity=0.312 Sum_probs=189.2
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
++||+|+||.||+|++..+++.||+|+++... ....+....|..++... +||+|+++++++ ...+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE-----EeCCEEEEEE
Confidence 47999999999999999999999999997432 22345567788888754 899999999985 4557899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~g~L~~~i~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 76 EFLNGGDLMFHIQDK------GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred CCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 999999999998764 4688999999999999999999999 9999999999999999999999999998642
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhH
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKV 940 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~ 940 (1013)
... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... . .
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~-----~---------~ 204 (316)
T cd05620 147 VFG--------DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED-----E---------L 204 (316)
T ss_pred ccC--------CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-----H---------H
Confidence 211 11233467899999999999999999999999999999999999999653110 0 0
Q ss_pred HHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHH-HHH
Q 001782 941 MEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMT-DVV 998 (1013)
Q Consensus 941 ~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl 998 (1013)
.+.+. ...+ ... ......+.+++.+|++.||++||++. ++.
T Consensus 205 ~~~~~---~~~~----~~~----------~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 205 FESIR---VDTP----HYP----------RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHH---hCCC----CCC----------CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 01000 0000 000 01124567889999999999999985 554
No 141
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.4e-35 Score=327.33 Aligned_cols=200 Identities=25% Similarity=0.355 Sum_probs=170.8
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccce
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
+|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+..|..++..+ +|++|+++++++ ...+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF-----QTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE-----ecCCE
Confidence 5788999999999999999999899999999997432 22234567788888777 588999998885 34578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++|+|.+++... +.+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQV------GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCC
Confidence 99999999999999998765 4688999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 147 ~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~ 204 (323)
T cd05616 147 MCKENMWD--------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 204 (323)
T ss_pred CceecCCC--------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCC
Confidence 98743211 11123456899999999999999999999999999999999999999753
No 142
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.2e-34 Score=314.40 Aligned_cols=262 Identities=23% Similarity=0.345 Sum_probs=207.1
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++|++++++++++. ..+.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-----~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI-----ENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee-----cCCe
Confidence 57999999999999999999999899999999886322 223567899999999999999999999864 3477
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++++|.+++..... ....+++.+++.++.|++.|++|||+. |++||||+|+||+++.++.++|+|||
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKK--QKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcc--cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccc
Confidence 8999999999999999875322 124588999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
++....... .......++..|+|||++.+..++.++|||||||++|+|++|+.||..... ....
T Consensus 152 ~~~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~----- 215 (267)
T cd08224 152 LGRFFSSKT--------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYS----- 215 (267)
T ss_pred eeeeccCCC--------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc---cHHH-----
Confidence 987543211 112234578899999999988899999999999999999999999864321 1111
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhh
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSAR 1005 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1005 (1013)
+.+....... + ..+ ....+..+.+++.+||+.+|++|||+.+|+++++++.
T Consensus 216 -------~~~~~~~~~~---~--------~~~-~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 216 -------LCKKIEKCDY---P--------PLP-ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -------HHhhhhcCCC---C--------CCC-hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1110000000 0 000 0123456789999999999999999999999999875
No 143
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.8e-35 Score=326.04 Aligned_cols=242 Identities=24% Similarity=0.310 Sum_probs=192.3
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
+.||+|+||+||+|++..+++.||+|+++... ......+..|.++++.+ +||||+++++++. ..+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~-----~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ-----TKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-----cCCEEEEEE
Confidence 46999999999999999899999999997432 23345677898998887 6999999999853 457899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++++|.+++... +.+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 76 EYVNGGDLMFHIQRS------GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred cCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 999999999998765 4689999999999999999999999 9999999999999999999999999998642
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhH
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKV 940 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~ 940 (1013)
... ........|++.|+|||++.+..++.++||||+||++|||++|+.||..... ....
T Consensus 147 ~~~--------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~-----~~~~-------- 205 (318)
T cd05570 147 ILG--------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE-----DELF-------- 205 (318)
T ss_pred CcC--------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH-----HHHH--------
Confidence 111 1112345689999999999999999999999999999999999999975321 0100
Q ss_pred HHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCH-----HHHHH
Q 001782 941 MEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQM-----TDVVA 999 (1013)
Q Consensus 941 ~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~ 999 (1013)
..+. ...+ .. ....+..+.+++.+||+.||++||++ .++++
T Consensus 206 ~~i~----~~~~----~~----------~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 206 QSIL----EDEV----RY----------PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHH----cCCC----CC----------CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 0000 0000 00 01123457889999999999999999 77764
No 144
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.8e-35 Score=328.05 Aligned_cols=267 Identities=21% Similarity=0.341 Sum_probs=203.2
Q ss_pred hccCCCCCceeeccceEEEEEEEC-----CCCeEEEEEEEeeccc-cchhHHHHHHHHHhcC-CCCccceEEEEeecCCc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLG-----ENEMAVAVKVMNLKQR-GATKSFVAECEALRNI-RHRNLIKIITVCSSIDF 770 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 770 (1013)
.++|++.+.||+|+||.||+|.+. .+++.||||+++.... .....+.+|+.++.++ +||||+++++++.
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~---- 81 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT---- 81 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceee----
Confidence 468999999999999999999853 4568899999974432 2345688999999999 6899999999874
Q ss_pred cccceEEEEEeeccCCCHHHHhhcccccc---------------------------------------------------
Q 001782 771 EEVDFKAIVYEYMECGSLEDWLHQSNDQL--------------------------------------------------- 799 (1013)
Q Consensus 771 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 799 (1013)
..+...++||||+++|+|.+++.......
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 23456789999999999999987532100
Q ss_pred ----------ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCCCCCccc
Q 001782 800 ----------EVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATIL 869 (1013)
Q Consensus 800 ----------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 869 (1013)
....+++.++..++.|++.|++|||++ +|+||||||+||++++++.+||+|||++.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--- 235 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--- 235 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcch---
Confidence 012478889999999999999999999 9999999999999999999999999999765322111
Q ss_pred cCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhh
Q 001782 870 ETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLL 948 (1013)
Q Consensus 870 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 948 (1013)
.......++..|+|||++.+..++.++||||||+++|||++ |..||....... .....+...
T Consensus 236 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------------~~~~~~~~~- 298 (343)
T cd05103 236 ---VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-------------EFCRRLKEG- 298 (343)
T ss_pred ---hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-------------HHHHHHhcc-
Confidence 11222345678999999988899999999999999999997 999986532111 000100000
Q ss_pred ccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhh
Q 001782 949 LLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARK 1006 (1013)
Q Consensus 949 ~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1006 (1013)
.++... ......+.+++.+||+.||++|||+.||++.|+.+.+
T Consensus 299 -----~~~~~~----------~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 299 -----TRMRAP----------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred -----CCCCCC----------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 000000 0112357889999999999999999999999998865
No 145
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=5.4e-38 Score=337.45 Aligned_cols=368 Identities=26% Similarity=0.386 Sum_probs=278.5
Q ss_pred CeeEEEeeccccccc-cCccccCCCCCCCeeeeccCCccccCCcccCCcccceEEeccCCccccCCCCccccCCCCceec
Q 001782 76 QRVTVLDLSNRSIEG-ILSPYVGNLSFLRFINFANNGFSGEIPGEIGRLFRLETLILANNSFSGKIPSNLSRCSNLINFH 154 (1013)
Q Consensus 76 ~~v~~l~l~~~~l~~-~~~~~l~~l~~L~~L~l~~n~l~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 154 (1013)
.-|..+|+++|.++| ..|..+..+++++.|-|...++. .+|.+++.|.+|++|.+++|++. .+-.+++.|+.|+.++
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 468999999999994 78999999999999999999999 99999999999999999999999 7888999999999999
Q ss_pred cccccccC-CCCCccccccccccceecccccccccCCCCccCCCCcceeeecccccCCCCCC-ccccccccceeeccccc
Q 001782 155 ARGNNLVG-QIPPDIGYSWLKLEFLSLRDNLLAGQLAPSIGNISNLQVLSIGENRLSGRLPD-SLGQLRSLYYLSISENA 232 (1013)
Q Consensus 155 l~~n~l~~-~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~n~ 232 (1013)
+++|++.. .||+++| .+..|+.|+|+.|+++ ..|..+.+-+++-+|+||+|+|. .||. -|-+|+.|-+||||+|+
T Consensus 85 ~R~N~LKnsGiP~diF-~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIF-RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred hhccccccCCCCchhc-ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccch
Confidence 99999874 5777776 5666666666666666 45666666666666666666666 3443 34456666666666666
Q ss_pred ccCCCcchhccCCccceeeccCCccCCCCCCCcCCCCCCCcEEEeeeccccccCCCCCCCCCCCceEEcccCccc-cccc
Q 001782 233 FSGMFPSSIFNISSLESISLLGNRLEGSLPVNIGFSLPNLENLSVRQNNYTGSLPHSLSNASNLRLLDFSLNHFS-GQVK 311 (1013)
Q Consensus 233 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~ 311 (1013)
+. .+|+.+..+..|++|+|++|.+. ..--..+-.|++|++|.+++.+=+ ..+|
T Consensus 162 Le-~LPPQ~RRL~~LqtL~Ls~NPL~-------------------------hfQLrQLPsmtsL~vLhms~TqRTl~N~P 215 (1255)
T KOG0444|consen 162 LE-MLPPQIRRLSMLQTLKLSNNPLN-------------------------HFQLRQLPSMTSLSVLHMSNTQRTLDNIP 215 (1255)
T ss_pred hh-hcCHHHHHHhhhhhhhcCCChhh-------------------------HHHHhcCccchhhhhhhcccccchhhcCC
Confidence 66 55666666666666666666553 111112223555666666554322 1123
Q ss_pred ccccCCCCccccccccCcCCCCCCCChhhhhhcccccccccccccccccCCccchhhhcchhhHHHHhccchhHHhhccc
Q 001782 312 IDFNRLPNLFRLSFSKNNLGTGAIGDLDFIAHLTNCSKLEALGLDTNIFGGVLPLSIANLSSTIILFSMGLNQIYVKNLV 391 (1013)
Q Consensus 312 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~ 391 (1013)
..+..+ .
T Consensus 216 tsld~l-------------------------------------------------------------------------~ 222 (1255)
T KOG0444|consen 216 TSLDDL-------------------------------------------------------------------------H 222 (1255)
T ss_pred Cchhhh-------------------------------------------------------------------------h
Confidence 222222 2
Q ss_pred ccceeecccccccCCcccccCCCCCCCEEEccCCccCccCCccccccCccCEEEcCCCcccCCCCcccccCcccceeecc
Q 001782 392 NLNGFGLEYNQLTGPIPHAIGELRNLQVLDLHHNNLDGHIPESLGNLTILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVS 471 (1013)
Q Consensus 392 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 471 (1013)
||..++|+.|.+. ..|+.+.++.+|+.|+||+|+|+ .+.-..+...+|++|+||+|+++ .+|.+++.+++|+.|++.
T Consensus 223 NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n 299 (1255)
T KOG0444|consen 223 NLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYAN 299 (1255)
T ss_pred hhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhc
Confidence 3444444445554 67778888888888999999888 45556667788999999999998 789999999999999999
Q ss_pred cccccc-cCCchhhcccchhhhhccCCCeecccCCccccCcCCCcEEEccCCCCCCCCcccccccccccccccccccccc
Q 001782 472 NNKLTG-ALPPQILGIVTLSILLDLSGNLLTGSIPAEVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLTG 550 (1013)
Q Consensus 472 ~N~l~~-~~p~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 550 (1013)
+|+++- -+|.++.. +..|+.+..++|++. .+|+.++.+.+|+.|.|+.|++. ..|+.+.-++.|+.|+|..|.--
T Consensus 300 ~NkL~FeGiPSGIGK-L~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL- 375 (1255)
T KOG0444|consen 300 NNKLTFEGIPSGIGK-LIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL- 375 (1255)
T ss_pred cCcccccCCccchhh-hhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc-
Confidence 998873 46777766 888999999999998 78999999999999999999998 78999999999999999999655
Q ss_pred ccCc
Q 001782 551 SIPL 554 (1013)
Q Consensus 551 ~~p~ 554 (1013)
+.|.
T Consensus 376 VMPP 379 (1255)
T KOG0444|consen 376 VMPP 379 (1255)
T ss_pred cCCC
Confidence 3443
No 146
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=5.5e-35 Score=318.86 Aligned_cols=248 Identities=23% Similarity=0.300 Sum_probs=192.6
Q ss_pred eeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeec
Q 001782 707 IGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYM 783 (1013)
Q Consensus 707 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 783 (1013)
||+|+||+||++.+..+++.||+|++..... ...+.+..|++++++++||+|+++.+++ ......++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF-----QTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE-----cCCCeEEEEEeCC
Confidence 6999999999999998999999999864322 2234577899999999999999999885 3457799999999
Q ss_pred cCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCC
Q 001782 784 ECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPC 863 (1013)
Q Consensus 784 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 863 (1013)
++|+|.+++..... ....+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+..+...
T Consensus 76 ~~g~L~~~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 76 NGGDLRYHIYNVDE--ENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCHHHHHHhccc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCC
Confidence 99999988754321 124689999999999999999999999 9999999999999999999999999999755322
Q ss_pred CCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHh
Q 001782 864 SPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEI 943 (1013)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1013)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .. +.
T Consensus 151 ~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~------------~~ 209 (280)
T cd05608 151 Q--------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NK------------EL 209 (280)
T ss_pred C--------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-HH------------HH
Confidence 1 112345689999999999999999999999999999999999999975321110 00 00
Q ss_pred hhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-----CHHHHHH
Q 001782 944 VDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-----QMTDVVA 999 (1013)
Q Consensus 944 i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 999 (1013)
......... ......+..+.+++.+|++.||++|| +++|+++
T Consensus 210 ~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 210 KQRILNDSV--------------TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHhhcccCC--------------CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 000000000 00012345678899999999999999 6677775
No 147
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.3e-35 Score=328.99 Aligned_cols=242 Identities=27% Similarity=0.299 Sum_probs=188.0
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHH-HHhcCCCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECE-ALRNIRHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
+.||+|+||+||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE-----ecCCEEEEEE
Confidence 46999999999999999999999999997432 222344555655 46778999999999985 4457899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++|+|..++... ..+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 76 DFVNGGELFFHLQRE------RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred cCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 999999999988765 4689999999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhH
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKV 940 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~ 940 (1013)
.. .........||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 147 ~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---------------- 202 (325)
T cd05604 147 IA--------QSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA---------------- 202 (325)
T ss_pred CC--------CCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH----------------
Confidence 21 111233457899999999999999999999999999999999999999753111
Q ss_pred HHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 941 MEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 941 ~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+..+..+......++ .....+.+++.+|++.+|.+||++.+.++
T Consensus 203 -~~~~~~~~~~~~~~~--------------~~~~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 203 -EMYDNILHKPLVLRP--------------GASLTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred -HHHHHHHcCCccCCC--------------CCCHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 111111111110010 11234678889999999999998864433
No 148
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=8.6e-35 Score=317.58 Aligned_cols=261 Identities=23% Similarity=0.381 Sum_probs=203.6
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCe----EEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEM----AVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 772 (1013)
..+|++.++||+|+||+||+|++..++. .||+|++..... ...+.+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT----- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-----
Confidence 4578899999999999999999865654 489999864332 234568899999999999999999998742
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
...++++||+++|+|.+++.... ..+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~ 151 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVRENK-----DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKIT 151 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEEC
Confidence 34679999999999999997642 3689999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHH
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEF 931 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~ 931 (1013)
|||+++.+....... ......++..|+|||+..+..++.++|||||||++|||++ |..||......
T Consensus 152 dfG~~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------- 218 (279)
T cd05109 152 DFGLARLLDIDETEY------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR------- 218 (279)
T ss_pred CCCceeeccccccee------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-------
Confidence 999998664321110 1112234678999999998999999999999999999998 89998653211
Q ss_pred HHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 001782 932 AKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARKIF 1008 (1013)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1008 (1013)
.....+........ ...++..+.+++.+||+.||++||++.|+++.|..+.+..
T Consensus 219 -------~~~~~~~~~~~~~~----------------~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 219 -------EIPDLLEKGERLPQ----------------PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred -------HHHHHHHCCCcCCC----------------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 11111111100000 0122456788999999999999999999999998886543
No 149
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=7.7e-35 Score=319.80 Aligned_cols=263 Identities=22% Similarity=0.383 Sum_probs=202.9
Q ss_pred cCCCCCceeeccceEEEEEEECC-----CCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGE-----NEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
+|++.+.||+|+||.||+|.+.. ....|++|.+..... ...+++.+|+.+++.++||||+++++.+. ..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS-----QD 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-----cC
Confidence 47889999999999999998743 235688888864332 23457889999999999999999999864 34
Q ss_pred ceEEEEEeeccCCCHHHHhhccccc------------------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecC
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQ------------------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGD 835 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~D 835 (1013)
+..+++|||+.+++|.+++...... .....+++.+++.++.|++.|++|||++ +++|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~d 152 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRD 152 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhh
Confidence 6689999999999999998754211 1123588999999999999999999999 999999
Q ss_pred CCCCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-C
Q 001782 836 LKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-R 914 (1013)
Q Consensus 836 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G 914 (1013)
|||+||++++++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++ |
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g 226 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDSY------VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 226 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccch------hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999755322211 01222345678999999988899999999999999999998 9
Q ss_pred CCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCH
Q 001782 915 RRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQM 994 (1013)
Q Consensus 915 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 994 (1013)
..||.... ++...+.+......+. + ..++..+.+++.+|++.+|++||++
T Consensus 227 ~~p~~~~~--------------~~~~~~~~~~~~~~~~---~-------------~~~~~~~~~~i~~cl~~~P~~Rp~~ 276 (290)
T cd05045 227 GNPYPGIA--------------PERLFNLLKTGYRMER---P-------------ENCSEEMYNLMLTCWKQEPDKRPTF 276 (290)
T ss_pred CCCCCCCC--------------HHHHHHHHhCCCCCCC---C-------------CCCCHHHHHHHHHHccCCcccCCCH
Confidence 99986531 1111122211111100 0 1223467889999999999999999
Q ss_pred HHHHHHHHHhhh
Q 001782 995 TDVVAKLCSARK 1006 (1013)
Q Consensus 995 ~evl~~L~~~~~ 1006 (1013)
+|+++.|+++..
T Consensus 277 ~~i~~~l~~~~~ 288 (290)
T cd05045 277 ADISKELEKMMV 288 (290)
T ss_pred HHHHHHHHHHHh
Confidence 999999998864
No 150
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.3e-35 Score=320.54 Aligned_cols=253 Identities=23% Similarity=0.298 Sum_probs=203.4
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
...+|++.+.||+|+||.||+|.+..+++.||+|.+........+.+.+|+.+++.++||||+++++.+. .+...
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~-----~~~~~ 92 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDEL 92 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEE-----eCCEE
Confidence 3468999999999999999999998899999999998665555677899999999999999999999864 34689
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+++++|.+++... .+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 93 ~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~ 162 (296)
T cd06654 93 WVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 162 (296)
T ss_pred EEeecccCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECcccc
Confidence 9999999999999998643 578889999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+....... .......+++.|+|||.+.+..++.++|||||||++|+|++|+.||....... ...
T Consensus 163 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~----~~~---- 226 (296)
T cd06654 163 CAQITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR----ALY---- 226 (296)
T ss_pred chhccccc--------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH----hHH----
Confidence 87543221 11223468899999999998889999999999999999999999996532110 000
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
... ....+ . ..........+.+++.+||..||++||++.|+++.
T Consensus 227 -----~~~---~~~~~----~--------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 227 -----LIA---TNGTP----E--------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred -----HHh---cCCCC----C--------CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 000 00000 0 00001223457889999999999999999999873
No 151
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=8e-35 Score=320.34 Aligned_cols=267 Identities=26% Similarity=0.405 Sum_probs=205.9
Q ss_pred hhhhccCCCCCceeeccceEEEEEEECCC-----CeEEEEEEEeeccc-cchhHHHHHHHHHhcC-CCCccceEEEEeec
Q 001782 695 SKATNDFSSSNMIGQGSFGFVYRGNLGEN-----EMAVAVKVMNLKQR-GATKSFVAECEALRNI-RHRNLIKIITVCSS 767 (1013)
Q Consensus 695 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 767 (1013)
....++|++.+.||+|+||.||+|..... ...||+|++..... ....++.+|+++++++ +||||+++++++.
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~- 86 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT- 86 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc-
Confidence 34567899999999999999999988543 37899999874322 2345688999999999 7999999999864
Q ss_pred CCccccceEEEEEeeccCCCHHHHhhccccc----------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 001782 768 IDFEEVDFKAIVYEYMECGSLEDWLHQSNDQ----------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLK 837 (1013)
Q Consensus 768 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk 837 (1013)
.....+++|||+++++|.++++..... .....+++.+++.++.|++.|++|||+. +|+|||||
T Consensus 87 ----~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlk 159 (293)
T cd05053 87 ----QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLA 159 (293)
T ss_pred ----CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccc
Confidence 346789999999999999999754210 1234689999999999999999999999 99999999
Q ss_pred CCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCC
Q 001782 838 PSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRR 916 (1013)
Q Consensus 838 p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~ 916 (1013)
|+||+++.++.+||+|||.++.+....... ......++..|+|||++.+..++.++|||||||++||+++ |..
T Consensus 160 p~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~ 233 (293)
T cd05053 160 ARNVLVTEDHVMKIADFGLARDIHHIDYYR------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGS 233 (293)
T ss_pred eeeEEEcCCCeEEeCcccccccccccccee------ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCC
Confidence 999999999999999999998654322111 1122335678999999988899999999999999999997 999
Q ss_pred CCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 001782 917 PTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTD 996 (1013)
Q Consensus 917 pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 996 (1013)
||...... . ..+.+.... ++. ....++..+.+++.+|++.||++|||+.|
T Consensus 234 p~~~~~~~-----~---------~~~~~~~~~------~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~e 283 (293)
T cd05053 234 PYPGIPVE-----E---------LFKLLKEGY------RME----------KPQNCTQELYHLMRDCWHEVPSQRPTFKQ 283 (293)
T ss_pred CCCCCCHH-----H---------HHHHHHcCC------cCC----------CCCCCCHHHHHHHHHHcccCcccCcCHHH
Confidence 98653111 0 111111000 000 00122456789999999999999999999
Q ss_pred HHHHHHHhh
Q 001782 997 VVAKLCSAR 1005 (1013)
Q Consensus 997 vl~~L~~~~ 1005 (1013)
+++.|+++.
T Consensus 284 il~~l~~~~ 292 (293)
T cd05053 284 LVEDLDRML 292 (293)
T ss_pred HHHHHHHhh
Confidence 999999874
No 152
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=6.6e-35 Score=313.42 Aligned_cols=249 Identities=29% Similarity=0.427 Sum_probs=195.1
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeec
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYM 783 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 783 (1013)
+.||+|+||.||+|++..+++.||+|.+..... .....+.+|++++++++||||+++++++. .....++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-----QKQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-----CCCCeEEEEeec
Confidence 469999999999999988899999998763322 23456899999999999999999999964 346789999999
Q ss_pred cCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCC
Q 001782 784 ECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPC 863 (1013)
Q Consensus 784 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 863 (1013)
++++|.+++.... ..+++.+++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||.+......
T Consensus 76 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 76 QGGDFLTFLRTEG-----PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDG 147 (252)
T ss_pred cCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccc
Confidence 9999999997542 3578999999999999999999999 9999999999999999999999999998754321
Q ss_pred CCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCChhHHH
Q 001782 864 SPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALPEKVME 942 (1013)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1013)
... ........+..|+|||.+.++.++.++|||||||++|||++ |..||...... ....
T Consensus 148 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--------------~~~~ 207 (252)
T cd05084 148 VYA------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--------------QTRE 207 (252)
T ss_pred ccc------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--------------HHHH
Confidence 110 00111223567999999999999999999999999999998 88888643111 1111
Q ss_pred hhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 943 IVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 943 ~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
.+.... ++. ....++..+.+++.+|++.+|++|||+.||+++|+
T Consensus 208 ~~~~~~------~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 208 AIEQGV------RLP----------CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHcCC------CCC----------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 111100 000 00122456889999999999999999999999886
No 153
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3e-35 Score=328.08 Aligned_cols=242 Identities=26% Similarity=0.308 Sum_probs=186.6
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHH-HHhcCCCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECE-ALRNIRHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
+.||+|+||+||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++ ...+..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE-----EcCCeEEEEE
Confidence 46999999999999999899999999997432 122233444444 56788999999999985 4457899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++++|.+++... ..+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 76 DYINGGELFYHLQRE------RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred eCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 999999999999765 4678889999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhH
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKV 940 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~ 940 (1013)
.. .........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. .
T Consensus 147 ~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~--------~ 205 (325)
T cd05602 147 IE--------HNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-----EM--------Y 205 (325)
T ss_pred cc--------CCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH-----HH--------H
Confidence 21 111233457999999999999999999999999999999999999999753211 00 0
Q ss_pred HHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 941 MEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 941 ~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..+........ ...+..+.+++.+|++.||.+||++.+.+.
T Consensus 206 ~~i~~~~~~~~------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 206 DNILNKPLQLK------------------PNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred HHHHhCCcCCC------------------CCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 01111000000 012345677888899999999998875443
No 154
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=7.1e-35 Score=314.91 Aligned_cols=257 Identities=30% Similarity=0.448 Sum_probs=202.8
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
..++|++.+.||+|++|.||+|.+. +++.||+|.++... ...+.+.+|++++++++||||+++++++. ..+..
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCT-----LEEPI 76 (261)
T ss_pred chhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEe-----cCCCe
Confidence 3567999999999999999999976 45679999986433 23567899999999999999999999854 44678
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+++++|.+++..... ..+++.++..++.|++.|+.|||+. +++||||||+||++++++.+||+|||+
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~ 149 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGAG----RALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGL 149 (261)
T ss_pred eeeeecccCCcHHHHHhccCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcce
Confidence 999999999999999976531 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhh
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
++........ .......+..|+|||+..+..++.++||||||+++|||++ |+.||......
T Consensus 150 ~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----------- 211 (261)
T cd05068 150 ARVIKEDIYE-------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA----------- 211 (261)
T ss_pred EEEccCCccc-------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-----------
Confidence 9866421110 1112233568999999998899999999999999999999 99998653111
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
.....+..... +. .....+..+.+++.+|++.+|.+||++.++++.|+++
T Consensus 212 ---~~~~~~~~~~~------~~----------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 212 ---EVLQQVDQGYR------MP----------CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ---HHHHHHHcCCC------CC----------CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 00011110000 00 0012245688999999999999999999999999863
No 155
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=9.8e-35 Score=313.79 Aligned_cols=255 Identities=29% Similarity=0.468 Sum_probs=201.3
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
.++|++.++||+|+||.||+|++..+ ..||+|+++... ...+.+.+|++++++++||||+++++++. ....+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~ 76 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIY 76 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC------CCCcE
Confidence 46799999999999999999998755 459999987432 23467899999999999999999998742 24578
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++..... ..+++..+..++.|++.||+|+|+. +++||||||+||++++++.+||+|||.+
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~ 149 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 149 (262)
T ss_pred EEEEcCCCCcHHHHHhhccc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCce
Confidence 99999999999999976422 3578999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+.+...... ......++..|+|||+..+..++.++|||||||++|||++ |..||......
T Consensus 150 ~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~------------ 210 (262)
T cd05071 150 RLIEDNEYT-------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------------ 210 (262)
T ss_pred eeccccccc-------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH------------
Confidence 765432211 1123346778999999988899999999999999999999 88888653211
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
...+.+.... +.. ...+++..+.+++.+|++.||++||+++++++.|++.
T Consensus 211 --~~~~~~~~~~------~~~----------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 211 --EVLDQVERGY------RMP----------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred --HHHHHHhcCC------CCC----------CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 0000000000 000 0113355688999999999999999999999999875
No 156
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7.4e-35 Score=316.97 Aligned_cols=260 Identities=21% Similarity=0.309 Sum_probs=202.9
Q ss_pred hhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcC-CCCccceEEEEeecCCcc-c
Q 001782 695 SKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFE-E 772 (1013)
Q Consensus 695 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~-~ 772 (1013)
+.+.+.|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++++ +||||+++++++...... .
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred CChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 346778999999999999999999999899999999987543 3346788999999998 699999999998643222 1
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
....++||||+++++|.+++..... ..+++..+..++.|++.|++|||++ +|+|+||||+||++++++.+||+
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~ 153 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 153 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEc
Confidence 3568999999999999999986432 4688999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCcc
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM-----GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLT 927 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~ 927 (1013)
|||++....... .......|+..|+|||++. +..++.++||||+||++|||++|+.||......
T Consensus 154 Dfg~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~--- 222 (272)
T cd06637 154 DFGVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM--- 222 (272)
T ss_pred cCCCceeccccc--------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH---
Confidence 999987543211 1233456889999999986 345788999999999999999999998643111
Q ss_pred HHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 928 LHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 928 ~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..... ... .+..+. ....++..+.+++.+||..||.+|||+.|+++
T Consensus 223 -~~~~~---------~~~-----~~~~~~-----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 223 -RALFL---------IPR-----NPAPRL-----------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred -HHHHH---------Hhc-----CCCCCC-----------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00000 000 000000 00112345789999999999999999999975
No 157
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1e-34 Score=316.57 Aligned_cols=262 Identities=26% Similarity=0.396 Sum_probs=202.0
Q ss_pred hhccCCCCCceeeccceEEEEEEECC-----CCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGE-----NEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDF 770 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 770 (1013)
..++|++.+.||+|+||.||+|.+.. .+..||+|.+..... .....+.+|+.++++++|+||+++++++.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~---- 79 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSF---- 79 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEc----
Confidence 35679999999999999999999976 678899998864432 23456889999999999999999999864
Q ss_pred cccceEEEEEeeccCCCHHHHhhcccccc-ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC--
Q 001782 771 EEVDFKAIVYEYMECGSLEDWLHQSNDQL-EVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM-- 847 (1013)
Q Consensus 771 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-- 847 (1013)
+....++||||+++++|.+++...+... ....+++.++++++.||+.|++|||++ +++||||||+||+++.++
T Consensus 80 -~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~ 155 (277)
T cd05036 80 -ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPG 155 (277)
T ss_pred -cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCC
Confidence 3356789999999999999998764211 113589999999999999999999999 999999999999998754
Q ss_pred -ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCC
Q 001782 848 -VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDG 925 (1013)
Q Consensus 848 -~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~ 925 (1013)
.+||+|||+++........ ........+..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~- 228 (277)
T cd05036 156 RVAKIADFGMARDIYRASYY------RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ- 228 (277)
T ss_pred cceEeccCccccccCCccce------ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence 6999999999865321110 01112234578999999999999999999999999999997 99998753211
Q ss_pred ccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 926 LTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
...+.+.... ++.. ...++..+.+++.+|++.+|++||++.||++.|+
T Consensus 229 -------------~~~~~~~~~~------~~~~----------~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 229 -------------EVMEFVTGGG------RLDP----------PKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred -------------HHHHHHHcCC------cCCC----------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1111111000 0000 0122456789999999999999999999999886
No 158
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.9e-35 Score=330.82 Aligned_cols=253 Identities=23% Similarity=0.275 Sum_probs=198.0
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.+.||+|+||+||+|++..+++.||+|+++.... ...+.+.+|+.+++.++||+|+++++++ .+...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~-----~~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF-----QDKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCe
Confidence 478899999999999999999999999999999974322 2345688999999999999999999985 34578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYE-----DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCC
Confidence 999999999999999998652 3689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccC------CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHH
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM------GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLH 929 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~ 929 (1013)
++..+...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... .
T Consensus 148 ~a~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~----~ 216 (330)
T cd05601 148 SAARLTANKMV-------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA----K 216 (330)
T ss_pred CCeECCCCCce-------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH----H
Confidence 99865432111 122346899999999986 456788999999999999999999999653111 0
Q ss_pred HHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 930 EFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 930 ~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
. ...+......... +.....+..+.+++..|++ +|++||+++++++
T Consensus 217 ~---------~~~i~~~~~~~~~--------------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 217 T---------YNNIMNFQRFLKF--------------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred H---------HHHHHcCCCccCC--------------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0 1111100000000 0000123456788889997 9999999999875
No 159
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.1e-35 Score=317.95 Aligned_cols=254 Identities=20% Similarity=0.300 Sum_probs=200.4
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
.++|++.++||+|+||.||+|++..+++.||+|+++.........+.+|+.+++.++||||+++++++. ..+..+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-----~~~~~~ 82 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL-----RRDKLW 82 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----eCCEEE
Confidence 457888999999999999999999899999999997655444566889999999999999999999853 457889
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++... +.+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.+
T Consensus 83 lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd06645 83 ICMEFCGGGSLQDIYHVT------GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVS 153 (267)
T ss_pred EEEeccCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceee
Confidence 999999999999998765 4689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM---GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
...... ........|+..|+|||++. ...++.++||||+||++|+|++|..||.......... .....
T Consensus 154 ~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~-~~~~~ 224 (267)
T cd06645 154 AQITAT--------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-LMTKS 224 (267)
T ss_pred eEccCc--------ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH-hhhcc
Confidence 754321 11123456899999999874 4568889999999999999999999986532111000 00000
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.. .+ . ........+..+.+++.+|++.+|++||+++++++
T Consensus 225 ~~--------------~~----~-------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 225 NF--------------QP----P-------KLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CC--------------CC----C-------cccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00 00 0 00000012345778999999999999999999875
No 160
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=7e-35 Score=316.17 Aligned_cols=262 Identities=23% Similarity=0.340 Sum_probs=206.2
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.+.||+|+||.||+|++..++..||||.+.... ....+++.+|+.+++.++||||+++++++. .++.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----EDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE-----eCCe
Confidence 47889999999999999999998899999999886432 223357889999999999999999999864 4478
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.+++|||+++++|.+++..... ....+++.+++.++.|++.|++|||++ +++|+||||+||+++.++.++|+|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKK--QKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcch
Confidence 8999999999999999875321 124689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
++........ ......++..|+|||++.+..++.++||||||+++|+|++|..||...... ...
T Consensus 152 ~~~~~~~~~~--------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~----- 215 (267)
T cd08229 152 LGRFFSSKTT--------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYS----- 215 (267)
T ss_pred hhhccccCCc--------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHH-----
Confidence 9876532211 122346889999999998888999999999999999999999998643111 001
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhh
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSAR 1005 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1005 (1013)
..+......+... .....+..+.+++.+||+.||.+|||+.+|++.++++.
T Consensus 216 -------~~~~~~~~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 216 -------LCKKIEQCDYPPL------------PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred -------HhhhhhcCCCCCC------------CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0000000000000 00123456889999999999999999999999998764
No 161
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.7e-35 Score=330.71 Aligned_cols=208 Identities=22% Similarity=0.322 Sum_probs=177.5
Q ss_pred hhhhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeec
Q 001782 691 YADLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSS 767 (1013)
Q Consensus 691 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 767 (1013)
..++....++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-- 112 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-- 112 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE--
Confidence 4555666789999999999999999999999999999999986322 22334578899999999999999999985
Q ss_pred CCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC
Q 001782 768 IDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM 847 (1013)
Q Consensus 768 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 847 (1013)
..+...++||||+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 113 ---~~~~~~~lv~Ey~~gg~L~~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~ 179 (371)
T cd05622 113 ---QDDRYLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSG 179 (371)
T ss_pred ---EcCCEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCC
Confidence 4557899999999999999998653 578889999999999999999999 999999999999999999
Q ss_pred ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCC----CCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 848 VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG----DMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 848 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
.+||+|||+++....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 180 ~ikL~DfG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 180 HLKLADFGTCMKMNKEGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred CEEEEeCCceeEcCcCCc-------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 999999999986532111 112345799999999998754 378899999999999999999999975
No 162
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.7e-34 Score=318.10 Aligned_cols=263 Identities=26% Similarity=0.394 Sum_probs=202.0
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCe--EEEEEEEeec-cccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEM--AVAVKVMNLK-QRGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 774 (1013)
++|++.+.||+|+||.||+|.+..++. .+++|.++.. .....+.+.+|+++++++ +||||+++++++. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-----~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACE-----NRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEc-----cCC
Confidence 578999999999999999999876654 4688887632 223345788999999999 7999999999863 446
Q ss_pred eEEEEEeeccCCCHHHHhhccccc----------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEec
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQ----------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLD 844 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~ 844 (1013)
..++||||+++++|.+++...... .....+++.+++.++.|++.|++|||++ +|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC
Confidence 789999999999999999764311 0113588999999999999999999999 999999999999999
Q ss_pred CCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCC
Q 001782 845 HDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFN 923 (1013)
Q Consensus 845 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~ 923 (1013)
+++.+||+|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |..||.....
T Consensus 154 ~~~~~kl~dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~ 224 (297)
T cd05089 154 ENLASKIADFGLSRGEEVY---------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC 224 (297)
T ss_pred CCCeEEECCcCCCccccce---------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 9999999999998632110 00111223567999999998899999999999999999997 9999965321
Q ss_pred CCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 924 DGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
. .. .+.+.... ++. ....++..+.+++.+||+.+|.+||+++++++.|..
T Consensus 225 ~-----~~---------~~~~~~~~------~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 274 (297)
T cd05089 225 A-----EL---------YEKLPQGY------RME----------KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSR 274 (297)
T ss_pred H-----HH---------HHHHhcCC------CCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1 00 00000000 000 001234567899999999999999999999999998
Q ss_pred hhhhh
Q 001782 1004 ARKIF 1008 (1013)
Q Consensus 1004 ~~~~~ 1008 (1013)
+.+..
T Consensus 275 ~~~~~ 279 (297)
T cd05089 275 MLEAR 279 (297)
T ss_pred HHHhh
Confidence 87654
No 163
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.2e-34 Score=312.07 Aligned_cols=252 Identities=27% Similarity=0.424 Sum_probs=197.9
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
++|++.+.||+|+||.||.|++.+ +..||+|.+.... ...+.+.+|+.++++++||||+++++++. .....++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCT-----KQRPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEc-----cCCCcEE
Confidence 578889999999999999998864 4569999886432 23467899999999999999999999964 3356899
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
||||+.+++|.+++.... ..+++.+++.++.||+.|++|||+. +++|+||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 77 VTEYMSNGCLLNYLREHG-----KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccce
Confidence 999999999999997642 3689999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCC
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
....... .......++..|+|||+..+..++.++|||||||++|||++ |..||......
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~------------- 208 (256)
T cd05113 149 YVLDDEY-------TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS------------- 208 (256)
T ss_pred ecCCCce-------eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-------------
Confidence 5532111 01122345678999999988889999999999999999998 99998653211
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
...+.+ .... |+... ...+..+.+++.+||+.+|.+||++.++++.++
T Consensus 209 -~~~~~~---~~~~---~~~~~----------~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 209 -ETVEKV---SQGL---RLYRP----------HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -HHHHHH---hcCC---CCCCC----------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 000100 0000 00000 012356789999999999999999999998763
No 164
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.9e-34 Score=310.66 Aligned_cols=251 Identities=30% Similarity=0.417 Sum_probs=199.1
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
..+|++.+.||+|+||.||+|... +..||+|..... ...+.+.+|+.++++++|++++++++++. ..+...+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~ 76 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLY 76 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEE----cCCCceE
Confidence 357899999999999999999875 667999988533 23467899999999999999999999753 3446789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++..... ..+++..++.++.|++.|++|||++ +++||||||+||++++++.+||+|||++
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~ 149 (256)
T cd05082 77 IVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 149 (256)
T ss_pred EEEECCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccc
Confidence 99999999999999976532 3578999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+..... .....++..|+|||++.+..++.++|||||||++|||++ |+.||.... ....
T Consensus 150 ~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-----~~~~----- 208 (256)
T cd05082 150 KEASST-----------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDV----- 208 (256)
T ss_pred eecccc-----------CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-----HHHH-----
Confidence 743221 112234578999999998899999999999999999997 999986421 1111
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
...+.... +.. ....++..+.+++.+|++.+|++|||+.++++.|+++
T Consensus 209 ----~~~~~~~~---~~~-------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 209 ----VPRVEKGY---KMD-------------APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ----HHHHhcCC---CCC-------------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 01011000 000 0012345678999999999999999999999998764
No 165
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.5e-34 Score=315.69 Aligned_cols=262 Identities=25% Similarity=0.430 Sum_probs=202.8
Q ss_pred hccCCCCCceeeccceEEEEEEEC-----CCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLG-----ENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 772 (1013)
..+|+..++||+|+||.||+|... .++..+|+|.+........+.+.+|++++++++||||+++++++. .
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 78 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCT-----E 78 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEe-----c
Confidence 357888999999999999999752 346789999887555555677999999999999999999999864 3
Q ss_pred cceEEEEEeeccCCCHHHHhhccccc---------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEe
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQ---------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLL 843 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll 843 (1013)
....+++|||+++++|.+++...... .....+++.+++.++.|++.|++|||+. +++||||||+||++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~ 155 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLV 155 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEE
Confidence 46789999999999999999765321 1113578999999999999999999999 99999999999999
Q ss_pred cCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcC
Q 001782 844 DHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMF 922 (1013)
Q Consensus 844 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~ 922 (1013)
++++.+||+|||+++.+...... .......+++.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 156 ~~~~~~kL~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 229 (280)
T cd05092 156 GQGLVVKIGDFGMSRDIYSTDYY------RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS 229 (280)
T ss_pred cCCCCEEECCCCceeEcCCCcee------ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCC
Confidence 99999999999998755322110 11223345688999999999999999999999999999998 899986532
Q ss_pred CCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 923 NDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
... . ..... ...+...+ ..++..+.+++.+||+.||.+||+++||.+.|+
T Consensus 230 ~~~----~---------~~~~~----~~~~~~~~-------------~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 230 NTE----A---------IECIT----QGRELERP-------------RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHH----H---------HHHHH----cCccCCCC-------------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 110 0 00000 00000000 123456789999999999999999999999886
Q ss_pred H
Q 001782 1003 S 1003 (1013)
Q Consensus 1003 ~ 1003 (1013)
.
T Consensus 280 ~ 280 (280)
T cd05092 280 A 280 (280)
T ss_pred C
Confidence 3
No 166
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.6e-34 Score=309.77 Aligned_cols=251 Identities=27% Similarity=0.417 Sum_probs=197.1
Q ss_pred CceeeccceEEEEEEECCCC---eEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENE---MAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
++||+|+||.||+|++...+ ..||+|.+..... ...+++.+|++++++++||||+++++++. ....++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK------GEPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc------CCceEEEE
Confidence 47999999999999875544 7899999874433 24467899999999999999999999853 24579999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++++|.+++... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++..
T Consensus 75 e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 75 ELAPLGPLLKYLKKR------REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred EeCCCCcHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEecccccccee
Confidence 999999999999865 3688999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCChh
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALPEK 939 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~~~ 939 (1013)
....... .......++..|+|||...+..++.++|||||||++|||++ |..||..... .....
T Consensus 146 ~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~--------- 209 (257)
T cd05060 146 GAGSDYY-----RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIA--------- 209 (257)
T ss_pred ecCCccc-----ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHH---------
Confidence 4322111 01112234568999999999999999999999999999998 9999865321 11111
Q ss_pred HHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhh
Q 001782 940 VMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSAR 1005 (1013)
Q Consensus 940 ~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1005 (1013)
.+... .+... ...++..+.+++.+|+..+|++||++.++++.|+++.
T Consensus 210 ---~~~~~---~~~~~-------------~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 210 ---MLESG---ERLPR-------------PEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ---HHHcC---CcCCC-------------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 11100 00000 0122456789999999999999999999999998764
No 167
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.2e-34 Score=312.13 Aligned_cols=251 Identities=20% Similarity=0.313 Sum_probs=200.8
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
+|++.++||+|+||.||++++..+++.||+|.++... ....+.+.+|+.+++.++||||+++++.+ ......++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF-----EADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EECCEEEE
Confidence 5788999999999999999999899999999986432 33456788999999999999999999985 44578999
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
||||+++++|.+++..... ..+++..++.++.|++.|+.|||++ +++|+||||+||++++++.++++|||.+.
T Consensus 76 v~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQRG----KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred EEeeCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcce
Confidence 9999999999999875432 4578999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCCh
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPE 938 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~ 938 (1013)
....... ......|++.|+|||++.+..++.++||||||+++|+|++|..||..... ....
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~------ 209 (255)
T cd08219 149 LLTSPGA--------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLI------ 209 (255)
T ss_pred eeccccc--------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHH------
Confidence 5532111 12235688899999999998999999999999999999999999975211 1000
Q ss_pred hHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 939 KVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 939 ~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
..+. ...... . ....+..+.+++.+||+.||++||++.|++.+
T Consensus 210 --~~~~----~~~~~~-----------~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 210 --LKVC----QGSYKP-----------L--PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --HHHh----cCCCCC-----------C--CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0000 000000 0 01123457889999999999999999999875
No 168
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.3e-34 Score=319.47 Aligned_cols=261 Identities=25% Similarity=0.388 Sum_probs=203.3
Q ss_pred hhccCCCCCceeeccceEEEEEEE-----CCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcC-CCCccceEEEEeecCC
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNL-----GENEMAVAVKVMNLKQ-RGATKSFVAECEALRNI-RHRNLIKIITVCSSID 769 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 769 (1013)
..++|.+.+.||+|+||.||+|.+ ...+..||+|+++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--- 109 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT--- 109 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe---
Confidence 346899999999999999999985 3345689999887443 23345788999999999 7999999999864
Q ss_pred ccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCce
Q 001782 770 FEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVA 849 (1013)
Q Consensus 770 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 849 (1013)
..+..++||||+.+++|.+++..... ..+++.++..++.|++.|++|||++ +++|+||||+||+++.++.+
T Consensus 110 --~~~~~~lv~e~~~~~~L~~~i~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~ 180 (302)
T cd05055 110 --IGGPILVITEYCCYGDLLNFLRRKRE----SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIV 180 (302)
T ss_pred --cCCceEEEEEcCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeE
Confidence 34678999999999999999976432 2489999999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccH
Q 001782 850 HVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTL 928 (1013)
Q Consensus 850 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~ 928 (1013)
|++|||+++......... ......++..|+|||++.+..++.++||||+||++|||++ |..||.......
T Consensus 181 ~l~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~--- 251 (302)
T cd05055 181 KICDFGLARDIMNDSNYV------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS--- 251 (302)
T ss_pred EECCCcccccccCCCcee------ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH---
Confidence 999999997553321110 1122346788999999999999999999999999999998 999987532111
Q ss_pred HHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 929 HEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 929 ~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
...+.+..... +.. . ...+..+.+++.+|++.+|++|||+.|+++.|+++
T Consensus 252 ----------~~~~~~~~~~~------~~~-~---------~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 252 ----------KFYKLIKEGYR------MAQ-P---------EHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ----------HHHHHHHcCCc------CCC-C---------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 11111111100 000 0 01134578999999999999999999999999875
No 169
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=9.5e-35 Score=327.02 Aligned_cols=279 Identities=19% Similarity=0.249 Sum_probs=200.4
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCC-cccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSID-FEEV 773 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 773 (1013)
..++|++.+.||+|+||+||+|.+..+++.||||++..... ...+.+.+|++++++++||||+++++++.... ....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 45789999999999999999999998999999999864322 23356778999999999999999999865321 1233
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++++|++ +++|.+++.. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~D 161 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC-------QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILD 161 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcC
Confidence 5678999988 5899888764 3689999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
||+++.... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...... .....+.
T Consensus 162 fg~~~~~~~-----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~ 229 (343)
T cd07878 162 FGLARQADD-----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIM 229 (343)
T ss_pred CccceecCC-----------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHH
Confidence 999975432 1234568999999999877 56889999999999999999999999753211 1111111
Q ss_pred HhhC--ChhHHHhhhhhhccchhhhhccCCCCchhHH-HHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 933 KMAL--PEKVMEIVDPLLLLDLEARASNCGSHRTEIA-KIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 933 ~~~~--~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.... +......+............... ...... ........+.+++.+|++.||.+|||+.|+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 230 EVVGTPSPEVLKKISSEHARKYIQSLPHM--PQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHhCCCCHHHHHhcchhhHHHHhhccccc--cchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1110 11110000000000000000000 000000 011123457899999999999999999999864
No 170
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.4e-34 Score=319.58 Aligned_cols=278 Identities=20% Similarity=0.281 Sum_probs=201.0
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.++|++.++||+|+||.||+|++..+++.||+|.+..... .....+.+|+.++++++||||+++++++. .+...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~-----~~~~~ 79 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-----TEKSL 79 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEe-----cCCeE
Confidence 3579999999999999999999998999999999874432 23456788999999999999999999954 45789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~ 150 (301)
T cd07873 80 TLVFEYLD-KDLKQYLDDCG-----NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGL 150 (301)
T ss_pred EEEEeccc-cCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcc
Confidence 99999998 69999887642 3578999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
+....... .......+++.|+|||++.+. .++.++|||||||++|||++|+.||...... ....... ..
T Consensus 151 ~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~-~~~~~~~-~~ 220 (301)
T cd07873 151 ARAKSIPT--------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE-EQLHFIF-RI 220 (301)
T ss_pred hhccCCCC--------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH-HH
Confidence 87532211 112234568899999987654 5788999999999999999999999754221 1111111 11
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhH-HHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEI-AKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
............+......+........... .........+.+++.+|++.||.+|||++|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 221 LGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1100001111111110000000000000000 011123456789999999999999999999986
No 171
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-34 Score=317.35 Aligned_cols=261 Identities=25% Similarity=0.425 Sum_probs=200.4
Q ss_pred ccCCCCCceeeccceEEEEEEE----CCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNL----GENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
.+|++.+.||+|+||.||+|.+ ...+..||+|.+..... .....+.+|++++++++||||+++++++. .+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~ 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT-----QE 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-----cC
Confidence 5788889999999999999985 33567899999874332 23356889999999999999999999854 44
Q ss_pred ceEEEEEeeccCCCHHHHhhccccc-----------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceE
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQ-----------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVL 842 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIl 842 (1013)
...++||||+++++|.+++...... .....+++.++..++.|++.|++|||++ +++||||||+||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 6789999999999999998643210 0113578899999999999999999999 9999999999999
Q ss_pred ecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCc
Q 001782 843 LDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNM 921 (1013)
Q Consensus 843 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~ 921 (1013)
+++++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~ 230 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADYY------RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGF 230 (283)
T ss_pred EcCCCcEEeccccccccccCCcce------ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999865332211 11223345778999999988899999999999999999998 99898653
Q ss_pred CCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 922 FNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
... ...+.+..... +.. ...++..+.+++.+|++.||++||++.+|.++|
T Consensus 231 ~~~--------------~~~~~~~~~~~------~~~----------~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l 280 (283)
T cd05090 231 SNQ--------------EVIEMVRKRQL------LPC----------SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRL 280 (283)
T ss_pred CHH--------------HHHHHHHcCCc------CCC----------CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHh
Confidence 110 11111110000 000 012245678899999999999999999999988
Q ss_pred HH
Q 001782 1002 CS 1003 (1013)
Q Consensus 1002 ~~ 1003 (1013)
..
T Consensus 281 ~~ 282 (283)
T cd05090 281 RS 282 (283)
T ss_pred hc
Confidence 64
No 172
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-36 Score=330.91 Aligned_cols=257 Identities=24% Similarity=0.427 Sum_probs=209.8
Q ss_pred cCCCCCceeeccceEEEEEEECCCC----eEEEEEEEeec-cccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENE----MAVAVKVMNLK-QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
..+..++||+|+||+||+|.+...+ .+||+|++... ......++..|+.+|.+++|||+++++|+|...
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------ 770 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------ 770 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------
Confidence 3455689999999999999985443 56899988633 334567899999999999999999999998643
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
...+|++|++.|+|.+|++..++ .+.....+.|..|||+||.|||++ ++|||||.++||||.+...+||.||
T Consensus 771 ~~qlvtq~mP~G~LlDyvr~hr~-----~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdf 842 (1177)
T KOG1025|consen 771 TLQLVTQLMPLGCLLDYVREHRD-----NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDF 842 (1177)
T ss_pred hHHHHHHhcccchHHHHHHHhhc-----cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEec
Confidence 37799999999999999998754 678889999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~ 933 (1013)
|+|+...++..... .....-.+.|||-|.+....|+.++|||||||++||++| |..||+....+
T Consensus 843 gla~ll~~d~~ey~------~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~--------- 907 (1177)
T KOG1025|consen 843 GLAKLLAPDEKEYS------APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE--------- 907 (1177)
T ss_pred chhhccCccccccc------ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH---------
Confidence 99998876543322 222234688999999999999999999999999999999 99999864221
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhh
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARK 1006 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1006 (1013)
++.+++++- + +++++.-|...++.++.+||..|+..||+++|+.+++.+..+
T Consensus 908 -----eI~dlle~g------e----------RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 908 -----EIPDLLEKG------E----------RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred -----HhhHHHhcc------c----------cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 122222211 1 122334567788999999999999999999999999988764
No 173
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.2e-34 Score=323.10 Aligned_cols=194 Identities=24% Similarity=0.350 Sum_probs=168.0
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++.++ +||+|+++++++ ......++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF-----QTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE-----EeCCEEEEEE
Confidence 47999999999999999999999999997432 22345678899999888 699999999985 4457899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++|+|.+++... +.+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~ 146 (327)
T cd05617 76 EYVNGGDLMFHMQRQ------RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEG 146 (327)
T ss_pred eCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence 999999999988765 4689999999999999999999999 9999999999999999999999999998742
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~ 198 (327)
T cd05617 147 LGP--------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 198 (327)
T ss_pred cCC--------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence 211 1112345789999999999999999999999999999999999999965
No 174
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.1e-34 Score=309.12 Aligned_cols=249 Identities=26% Similarity=0.411 Sum_probs=195.0
Q ss_pred ceeeccceEEEEEEE--CCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEe
Q 001782 706 MIGQGSFGFVYRGNL--GENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 706 ~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
.||+|+||.||+|.+ ..++..||+|+++.... ...+.+.+|+.+++.++||||+++++++. .+..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------~~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE------AESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc------CCCcEEEEe
Confidence 689999999999965 45678899999864432 23457889999999999999999999863 245689999
Q ss_pred eccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCC
Q 001782 782 YMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLP 861 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 861 (1013)
|+++++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 76 ~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 76 LAELGPLNKFLQKN------KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred cCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 99999999999764 4688999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCChhH
Q 001782 862 PCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALPEKV 940 (1013)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 940 (1013)
...... .......++..|+|||.+....++.++|||||||++|||++ |+.||...... ..
T Consensus 147 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------------~~ 207 (257)
T cd05116 147 ADENYY-----KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--------------EV 207 (257)
T ss_pred CCCCee-----eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------------HH
Confidence 322110 01122334678999999988889999999999999999998 99999753111 01
Q ss_pred HHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 941 MEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 941 ~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
.+.+.... ++... ..++..+.+++.+||+.||++||++++|.+.|+..
T Consensus 208 ~~~i~~~~------~~~~~----------~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 208 TQMIESGE------RMECP----------QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHHHHCCC------CCCCC----------CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 11111110 00000 12345678999999999999999999999999864
No 175
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-35 Score=308.54 Aligned_cols=250 Identities=22% Similarity=0.334 Sum_probs=206.0
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc--chhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG--ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
..+-|...+.||+|.|+.|-+|++--+|..||||++....-. ....+.+|++.|+.++|||||++|++ .+...
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEV-----iDTQT 90 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEV-----IDTQT 90 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeeh-----hcccc
Confidence 345788899999999999999999999999999999855433 34568899999999999999999999 56678
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEec-CCCceEEcc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLD-HDMVAHVGD 853 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~D 853 (1013)
..|+|.|.-++|+|.+||-+.. ..+.+.-+.+++.||+.|+.|.|+. .+||||+||+||.+- .-|-||+.|
T Consensus 91 KlyLiLELGD~GDl~DyImKHe-----~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTD 162 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKHE-----EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTD 162 (864)
T ss_pred eEEEEEEecCCchHHHHHHhhh-----ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeee
Confidence 8999999999999999998874 4789999999999999999999999 999999999998775 568999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCc-ccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSA-TGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
||++..+.++. .....+|+..|.|||++.+..|+. ++||||+|||+|-+++|+.||+...+. ..+
T Consensus 163 FGFSNkf~PG~---------kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS-ETL---- 228 (864)
T KOG4717|consen 163 FGFSNKFQPGK---------KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS-ETL---- 228 (864)
T ss_pred ccccccCCCcc---------hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch-hhh----
Confidence 99998765432 355678999999999999999875 689999999999999999999864222 111
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.-+++-.. .- +.-...++.++|..|+..||++|.+.+||+.
T Consensus 229 --------TmImDCKY-tv-----------------PshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 229 --------TMIMDCKY-TV-----------------PSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred --------hhhhcccc-cC-----------------chhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 11111111 00 1123455788999999999999999999874
No 176
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1e-34 Score=313.59 Aligned_cols=253 Identities=28% Similarity=0.465 Sum_probs=199.4
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchh--HHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATK--SFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
|++++.||+|+||+||+|++..+++.||+|++......... ...+|+.++++++||||+++++++. .....++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQ-----DDNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEE-----ESSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccc-----ccccccc
Confidence 66789999999999999999999999999999865443222 3456999999999999999999964 3578899
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
||||+++++|.+++... ..+++.+++.++.|+++||++||++ +++|+||||+||++++++.++|+|||.+.
T Consensus 76 v~~~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKN------KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEETTEBHHHHHHHH------SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred ccccccccccccccccc------ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 99999988999999843 5789999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccC-CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGM-GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
... ..........++..|+|||++. +..++.++||||+|+++|+|++|..||......
T Consensus 147 ~~~--------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~------------- 205 (260)
T PF00069_consen 147 KLS--------ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD------------- 205 (260)
T ss_dssp EST--------STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH-------------
T ss_pred ccc--------ccccccccccccccccccccccccccccccccccccccccccccccccccccccch-------------
Confidence 541 1112244567899999999998 788999999999999999999999999764100
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+....+.+........... ........+.+++.+|++.||++||++.|+++
T Consensus 206 -~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 206 -DQLEIIEKILKRPLPSSSQ----------QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp -HHHHHHHHHHHTHHHHHTT----------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred -hhhhhhhhccccccccccc----------ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0011111111100000000 00011257899999999999999999999975
No 177
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.1e-34 Score=314.70 Aligned_cols=268 Identities=23% Similarity=0.384 Sum_probs=208.1
Q ss_pred hhccCCCCCceeeccceEEEEEEECC----CCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCcc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGE----NEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFE 771 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 771 (1013)
..++|++.+.||+|+||.||+|.+.. ++..|++|++.... ....+.+.+|+.++++++||||+++++++. .
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~----~ 79 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCI----E 79 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe----c
Confidence 35689999999999999999999865 36789999886332 223456889999999999999999999874 3
Q ss_pred ccceEEEEEeeccCCCHHHHhhccccc--cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCce
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQ--LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVA 849 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 849 (1013)
.+...++++||+++++|.+++...... .....+++.+++.++.|++.|++|||++ +++||||||+||++++++.+
T Consensus 80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~ 156 (280)
T cd05043 80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQV 156 (280)
T ss_pred CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcE
Confidence 346789999999999999999764321 1124689999999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccH
Q 001782 850 HVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTL 928 (1013)
Q Consensus 850 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~ 928 (1013)
||+|||+++.+.+...... .....++..|+|||++.+..++.++|||||||++||+++ |+.||..... ...
T Consensus 157 kl~d~g~~~~~~~~~~~~~------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~ 228 (280)
T cd05043 157 KITDNALSRDLFPMDYHCL------GDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEM 228 (280)
T ss_pred EECCCCCcccccCCceEEe------CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHH
Confidence 9999999986543221111 112345778999999998899999999999999999999 9999865311 011
Q ss_pred HHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 001782 929 HEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARKI 1007 (1013)
Q Consensus 929 ~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 1007 (1013)
...+.... ++.. ...++..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 229 ------------~~~~~~~~------~~~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 229 ------------AAYLKDGY------RLAQ----------PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred ------------HHHHHcCC------CCCC----------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 11111100 0000 012245678999999999999999999999999998764
No 178
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.1e-35 Score=348.39 Aligned_cols=263 Identities=19% Similarity=0.308 Sum_probs=201.7
Q ss_pred hhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCc
Q 001782 693 DLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDF 770 (1013)
Q Consensus 693 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 770 (1013)
+.....++|++.++||+|+||+||+|++..++..||+|++.... ......+..|+.++++++||||+++++++..
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d--- 83 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN--- 83 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe---
Confidence 34455679999999999999999999999999999999987432 2234668899999999999999999998642
Q ss_pred cccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCC----CCeeecCCCCCceEecCC
Q 001782 771 EEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCH----PPIVHGDLKPSNVLLDHD 846 (1013)
Q Consensus 771 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~----~~ivH~Dlkp~NIll~~~ 846 (1013)
......|+||||+++++|.+++...... ...+++..++.|+.||+.||+|||+... .+||||||||+|||++.+
T Consensus 84 e~~~~lyIVMEY~~gGSL~~lL~k~~~~--~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~ 161 (1021)
T PTZ00266 84 KANQKLYILMEFCDAGDLSRNIQKCYKM--FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTG 161 (1021)
T ss_pred cCCCEEEEEEeCCCCCcHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecC
Confidence 2346789999999999999999764221 1468999999999999999999998520 159999999999999642
Q ss_pred -----------------CceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCC--CCCCcccchHHHHHH
Q 001782 847 -----------------MVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG--GDMSATGDVYSFGIL 907 (1013)
Q Consensus 847 -----------------~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DIwSlG~i 907 (1013)
+.+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||+
T Consensus 162 ~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~I 232 (1021)
T PTZ00266 162 IRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES---------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCI 232 (1021)
T ss_pred ccccccccccccccCCCCceEEccCCccccccccc---------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHH
Confidence 358999999997553211 1234578999999999864 458899999999999
Q ss_pred HHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCC
Q 001782 908 LLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMES 987 (1013)
Q Consensus 908 l~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d 987 (1013)
+|||++|+.||..... ..... ..+. ..| ... ....+..+.+++..||+.+
T Consensus 233 LYELLTGk~PF~~~~~----~~qli---------~~lk----~~p----~lp---------i~~~S~eL~dLI~~~L~~d 282 (1021)
T PTZ00266 233 IYELCSGKTPFHKANN----FSQLI---------SELK----RGP----DLP---------IKGKSKELNILIKNLLNLS 282 (1021)
T ss_pred HHHHHHCCCCCCcCCc----HHHHH---------HHHh----cCC----CCC---------cCCCCHHHHHHHHHHhcCC
Confidence 9999999999965311 11110 0000 000 000 0012345788999999999
Q ss_pred CCCCCCHHHHHH
Q 001782 988 PSERIQMTDVVA 999 (1013)
Q Consensus 988 P~~RPs~~evl~ 999 (1013)
|.+||++.|++.
T Consensus 283 PeeRPSa~QlL~ 294 (1021)
T PTZ00266 283 AKERPSALQCLG 294 (1021)
T ss_pred hhHCcCHHHHhc
Confidence 999999999984
No 179
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.5e-34 Score=309.74 Aligned_cols=251 Identities=23% Similarity=0.371 Sum_probs=202.1
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec--cccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK--QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.+.||+|++|.||+|.+..+++.|++|.+... .....+.+.+|++++++++|||++++++++. .....+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL-----DKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec-----cCCEEE
Confidence 477889999999999999999989999999998743 2334567889999999999999999999853 447899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++..... ..+++.+++.++.|++.|+.|||+. +++|+||||+||++++++.+||+|||++
T Consensus 76 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQRG----RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred EEEEeCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccc
Confidence 99999999999999986522 4688999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
+.+.... .......|++.|+|||+..+..++.++|||||||++|||++|+.||...... ..
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~------ 209 (256)
T cd08529 149 KLLSDNT--------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-----AL------ 209 (256)
T ss_pred eeccCcc--------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-----HH------
Confidence 8654321 1122345788999999999999999999999999999999999999753210 00
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
...... ... + ... ...+..+.+++.+||+.+|++||++.|+++.
T Consensus 210 --~~~~~~----~~~---~--------~~~--~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 210 --ILKIIR----GVF---P--------PVS--QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred --HHHHHc----CCC---C--------CCc--cccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 000000 000 0 000 1234568899999999999999999999863
No 180
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.4e-36 Score=318.49 Aligned_cols=253 Identities=22% Similarity=0.328 Sum_probs=192.7
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec--cccchhHHHHHHHHHhcCC-CCccceEEEEeecCCccccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK--QRGATKSFVAECEALRNIR-HRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 774 (1013)
...|++.++||+||.+.||++...+. +.||+|.+... +.....-|.+|+..|.+++ |.+|+++++| .-.++
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DY-----Ev~d~ 433 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDY-----EVTDG 433 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeee-----eccCc
Confidence 45799999999999999999998644 45666655422 2233467999999999995 9999999999 34568
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
+.|+||||-+ .+|..+++.... .++.-.++.+..|++.|+.++|++ ||||.||||.|+|+- .|.+||+||
T Consensus 434 ~lYmvmE~Gd-~DL~kiL~k~~~-----~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDF 503 (677)
T KOG0596|consen 434 YLYMVMECGD-IDLNKILKKKKS-----IDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDF 503 (677)
T ss_pred eEEEEeeccc-ccHHHHHHhccC-----CCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeee
Confidence 9999999877 899999998743 233238889999999999999999 999999999999994 568999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCC-----------CCCcccchHHHHHHHHHHHhCCCCCCCcCC
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-----------DMSATGDVYSFGILLLEMFTRRRPTDNMFN 923 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DIwSlG~il~ell~G~~pf~~~~~ 923 (1013)
|+|..+.++...- .....+||+.||+||.+... ..++++||||+|||+|+|+.|+.||+...+
T Consensus 504 GIA~aI~~DTTsI------~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n 577 (677)
T KOG0596|consen 504 GIANAIQPDTTSI------VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN 577 (677)
T ss_pred chhcccCccccce------eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH
Confidence 9999776543322 24567899999999987653 256789999999999999999999976321
Q ss_pred CCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 924 DGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.. .++..+.++--...+ +.++. ..++.++|+.||..||++|||+.|+++
T Consensus 578 ~~------------aKl~aI~~P~~~Ief-----------p~~~~----~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 578 QI------------AKLHAITDPNHEIEF-----------PDIPE----NDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HH------------HHHHhhcCCCccccc-----------cCCCC----chHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 10 112222221110000 01111 123789999999999999999999985
No 181
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-35 Score=324.51 Aligned_cols=248 Identities=23% Similarity=0.406 Sum_probs=202.8
Q ss_pred CCCCceeeccceEEEEEEECCCCeEEEEEEEee----ccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 702 SSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNL----KQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 702 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+...+||+|+|-+||+|.+..+|..||--.++. ......++|..|+.+|+.++||||+++|+.+.+. ......
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~---~n~~in 119 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT---DNKTIN 119 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC---CCceee
Confidence 456789999999999999999998887543331 2233457899999999999999999999996543 235678
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC-CceEEccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD-MVAHVGDFGL 856 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~ 856 (1013)
+|+|.+..|+|..|.++. +.++...+..|++||++||.|||++ .|+|+|||||.+||+|..+ |.|||+|+|+
T Consensus 120 ~iTEL~TSGtLr~Y~kk~------~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGL 192 (632)
T KOG0584|consen 120 FITELFTSGTLREYRKKH------RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGL 192 (632)
T ss_pred eeeecccCCcHHHHHHHh------ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhH
Confidence 999999999999999988 5788899999999999999999998 5689999999999999865 8999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
|..... .......|||.|||||+.. ..|+..+||||||+++.||+|+.+||..-.+....+++......
T Consensus 193 Atl~r~----------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiK 261 (632)
T KOG0584|consen 193 ATLLRK----------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIK 261 (632)
T ss_pred HHHhhc----------cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCC
Confidence 986532 2234478999999999976 78999999999999999999999999876555555555444444
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
|..+..+- | +.+.++|.+|+.. .++|||+.|++.
T Consensus 262 P~sl~kV~------d----------------------Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 262 PAALSKVK------D----------------------PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHhhccC------C----------------------HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 43333322 2 2357889999999 999999999985
No 182
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.2e-34 Score=317.86 Aligned_cols=270 Identities=19% Similarity=0.254 Sum_probs=208.9
Q ss_pred cchhhhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcC-CCCccceEEEEeec
Q 001782 689 VSYADLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNI-RHRNLIKIITVCSS 767 (1013)
Q Consensus 689 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 767 (1013)
+.++++..+.++|++.+.||+|+||.||+|++..+++.||+|+..... .....+.+|+.+++++ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 455677788899999999999999999999999899999999876432 2235688899999999 69999999999865
Q ss_pred CCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC
Q 001782 768 IDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM 847 (1013)
Q Consensus 768 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 847 (1013)
.....++..++||||+++++|.+++..... ....+++..+..++.|++.|+.|||+. +++||||||+||++++++
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLK--RGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhc--cCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 544566789999999999999998864321 114688899999999999999999999 999999999999999999
Q ss_pred ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCC-----CCCCcccchHHHHHHHHHHHhCCCCCCCcC
Q 001782 848 VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-----GDMSATGDVYSFGILLLEMFTRRRPTDNMF 922 (1013)
Q Consensus 848 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DIwSlG~il~ell~G~~pf~~~~ 922 (1013)
.+||+|||+++...... .......|+..|+|||++.. ..++.++||||+||++|||++|+.||....
T Consensus 162 ~~kl~dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~ 233 (286)
T cd06638 162 GVKLVDFGVSAQLTSTR--------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLH 233 (286)
T ss_pred CEEEccCCceeecccCC--------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCc
Confidence 99999999987553211 11223468899999998753 457889999999999999999999986532
Q ss_pred CCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 923 NDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.. .... .... . .++... ........+.+++.+||+.||++|||+.||++.
T Consensus 234 ~~----~~~~---------~~~~----~---~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 234 PM----RALF---------KIPR----N---PPPTLH--------QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred hh----HHHh---------hccc----c---CCCccc--------CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 11 0000 0000 0 000000 001123457889999999999999999999875
No 183
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.9e-34 Score=318.46 Aligned_cols=263 Identities=26% Similarity=0.390 Sum_probs=200.5
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCe--EEEEEEEeecc-ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCcccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEM--AVAVKVMNLKQ-RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 773 (1013)
.++|++.+.||+|+||.||+|.+..++. .+|+|.+.... ....+.+.+|++++.++ +||||+++++++. ..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~-----~~ 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HR 80 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC-----CC
Confidence 4578899999999999999999876664 45777665322 22345788999999999 8999999999963 44
Q ss_pred ceEEEEEeeccCCCHHHHhhcccccc----------ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEe
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQL----------EVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLL 843 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll 843 (1013)
+..++||||+++++|.+++....... ....+++.+++.++.|++.|++|||++ |++||||||+||++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili 157 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 157 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEe
Confidence 67899999999999999997653210 123588999999999999999999999 99999999999999
Q ss_pred cCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcC
Q 001782 844 DHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMF 922 (1013)
Q Consensus 844 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~ 922 (1013)
++++.+||+|||+++.... ........++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 158 ~~~~~~kl~dfg~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 228 (303)
T cd05088 158 GENYVAKIADFGLSRGQEV---------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 228 (303)
T ss_pred cCCCcEEeCccccCcccch---------hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCC
Confidence 9999999999999863211 001111234678999999988889999999999999999998 999986432
Q ss_pred CCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 923 NDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
.. .. .+.+.... ++.. ....+..+.+++.+||+.+|++||++.++++.+.
T Consensus 229 ~~-----~~---------~~~~~~~~------~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~ 278 (303)
T cd05088 229 CA-----EL---------YEKLPQGY------RLEK----------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 278 (303)
T ss_pred hH-----HH---------HHHHhcCC------cCCC----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 10 00000000 0000 0112345788999999999999999999999998
Q ss_pred Hhhhh
Q 001782 1003 SARKI 1007 (1013)
Q Consensus 1003 ~~~~~ 1007 (1013)
.+.+.
T Consensus 279 ~~~~~ 283 (303)
T cd05088 279 RMLEE 283 (303)
T ss_pred HHHHh
Confidence 87544
No 184
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.1e-34 Score=318.90 Aligned_cols=268 Identities=25% Similarity=0.380 Sum_probs=205.5
Q ss_pred hccCCCCCceeeccceEEEEEEECC-------CCeEEEEEEEeecc-ccchhHHHHHHHHHhcC-CCCccceEEEEeecC
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGE-------NEMAVAVKVMNLKQ-RGATKSFVAECEALRNI-RHRNLIKIITVCSSI 768 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 768 (1013)
.++|.+.+.||+|+||.||+|++.. +...||+|++.... .....++.+|+++++++ +||||+++++++.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-- 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-- 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe--
Confidence 4689999999999999999998743 23469999987542 22345688899999999 7999999999964
Q ss_pred CccccceEEEEEeeccCCCHHHHhhccccc----------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCC
Q 001782 769 DFEEVDFKAIVYEYMECGSLEDWLHQSNDQ----------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKP 838 (1013)
Q Consensus 769 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp 838 (1013)
.....++||||+++++|.+++...+.. .....+++.++++++.|++.|++|||++ +++||||||
T Consensus 95 ---~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 168 (307)
T cd05098 95 ---QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAA 168 (307)
T ss_pred ---cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccH
Confidence 346789999999999999999865321 1123588999999999999999999999 999999999
Q ss_pred CceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCC
Q 001782 839 SNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRP 917 (1013)
Q Consensus 839 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~p 917 (1013)
+||+++.++.+||+|||.++........ .......++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p 242 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDYY------KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 242 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccchh------hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999998755321110 01112234578999999998899999999999999999998 8888
Q ss_pred CCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 001782 918 TDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDV 997 (1013)
Q Consensus 918 f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 997 (1013)
|.... ... ..+.+.... ++. ....++..+.+++.+|++.+|++|||+.||
T Consensus 243 ~~~~~-----~~~---------~~~~~~~~~------~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~ev 292 (307)
T cd05098 243 YPGVP-----VEE---------LFKLLKEGH------RMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQL 292 (307)
T ss_pred CCcCC-----HHH---------HHHHHHcCC------CCC----------CCCcCCHHHHHHHHHHcccChhhCcCHHHH
Confidence 85421 111 111111000 000 001234567889999999999999999999
Q ss_pred HHHHHHhhhhhh
Q 001782 998 VAKLCSARKIFL 1009 (1013)
Q Consensus 998 l~~L~~~~~~~~ 1009 (1013)
++.|+++.+...
T Consensus 293 l~~l~~~~~~~~ 304 (307)
T cd05098 293 VEDLDRILALTS 304 (307)
T ss_pred HHHHHHHHHHhh
Confidence 999999887643
No 185
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2e-34 Score=319.04 Aligned_cols=264 Identities=22% Similarity=0.331 Sum_probs=202.2
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
++|++.++||+|+||.||+|++..++..||+|.+..... ....++.+|++++++++||||+++++++. .++..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-----SDGEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCCEEE
Confidence 468999999999999999999998999999999874422 23356889999999999999999999964 457899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHH-HCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
+||||+++++|.+++... +.+++..+..++.|++.||+|||+ . +++||||||+||+++.++.+||+|||+
T Consensus 76 lv~ey~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKA------GRIPENILGKISIAVLRGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGV 146 (308)
T ss_pred EEeeccCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhhC---CEEECCCChHHEEEecCCcEEEccCCC
Confidence 999999999999999765 468899999999999999999997 5 899999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+...... ......|+..|+|||++.+..++.++|||||||++|+|++|+.||...... ..........
T Consensus 147 ~~~~~~~----------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~ 214 (308)
T cd06615 147 SGQLIDS----------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPV 214 (308)
T ss_pred ccccccc----------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCcc
Confidence 8754221 123456889999999998888999999999999999999999998643211 1111111000
Q ss_pred Ch---------------------hHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHH
Q 001782 937 PE---------------------KVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMT 995 (1013)
Q Consensus 937 ~~---------------------~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 995 (1013)
.. ...+..+...... ++ ..+. ......+.+++.+|++.+|++|||+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~ 282 (308)
T cd06615 215 SEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEP---PP--------KLPS-GAFSDEFQDFVDKCLKKNPKERADLK 282 (308)
T ss_pred ccccccCCcccccCCCCCccchhhHHHHHHHHhcCC---Cc--------cCcC-cccCHHHHHHHHHHccCChhhCcCHH
Confidence 00 0000000000000 00 0000 01345688999999999999999999
Q ss_pred HHHHH
Q 001782 996 DVVAK 1000 (1013)
Q Consensus 996 evl~~ 1000 (1013)
||++.
T Consensus 283 ~ll~~ 287 (308)
T cd06615 283 ELTKH 287 (308)
T ss_pred HHhcC
Confidence 99876
No 186
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.3e-34 Score=311.44 Aligned_cols=254 Identities=22% Similarity=0.336 Sum_probs=201.0
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-----cchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-----GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
++|++.+.||+|++|.||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++ ...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCL-----RDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ccC
Confidence 478999999999999999999988899999999874322 1234688899999999999999999995 344
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
+..++|+||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+|
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAY------GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 6899999999999999999765 4678899999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||.++........ ........++..|+|||++.+..++.++||||+|+++|||++|+.||...... .....
T Consensus 148 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~ 218 (263)
T cd06625 148 FGASKRLQTICSS-----GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM----AAIFK 218 (263)
T ss_pred cccceeccccccc-----cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----HHHHH
Confidence 9998755321110 11112345788999999999989999999999999999999999998653111 11000
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
..... .++. ........+.+++.+||..+|.+|||+.|+++.
T Consensus 219 ---------~~~~~------~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 219 ---------IATQP------TNPQ----------LPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ---------HhccC------CCCC----------CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 00000 0000 001234457889999999999999999999864
No 187
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3e-34 Score=317.36 Aligned_cols=268 Identities=24% Similarity=0.391 Sum_probs=205.9
Q ss_pred hhhccCCCCCceeeccceEEEEEEEC-------CCCeEEEEEEEeecc-ccchhHHHHHHHHHhcC-CCCccceEEEEee
Q 001782 696 KATNDFSSSNMIGQGSFGFVYRGNLG-------ENEMAVAVKVMNLKQ-RGATKSFVAECEALRNI-RHRNLIKIITVCS 766 (1013)
Q Consensus 696 ~~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 766 (1013)
...++|++.+.||+|+||.||+|++. ..+..||+|...... ....+.+.+|+.+++.+ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 34568999999999999999999752 234579999886432 23346789999999999 8999999999964
Q ss_pred cCCccccceEEEEEeeccCCCHHHHhhccccc----------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCC
Q 001782 767 SIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQ----------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDL 836 (1013)
Q Consensus 767 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dl 836 (1013)
.....++||||+++++|.+++...... .....+++.++..++.||+.|++|||++ |++||||
T Consensus 92 -----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dl 163 (304)
T cd05101 92 -----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDL 163 (304)
T ss_pred -----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeeccc
Confidence 346789999999999999999865321 1123578899999999999999999999 9999999
Q ss_pred CCCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CC
Q 001782 837 KPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RR 915 (1013)
Q Consensus 837 kp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~ 915 (1013)
||+||++++++.+||+|||.++.+...... .......++..|+|||++.+..++.++||||||+++|||++ |.
T Consensus 164 kp~Nili~~~~~~kl~D~g~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~ 237 (304)
T cd05101 164 AARNVLVTENNVMKIADFGLARDVNNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 237 (304)
T ss_pred ccceEEEcCCCcEEECCCccceeccccccc------ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence 999999999999999999999865432211 11222345678999999998889999999999999999998 78
Q ss_pred CCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHH
Q 001782 916 RPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMT 995 (1013)
Q Consensus 916 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 995 (1013)
.||.... .... .+.+.. .. +.. ....++..+.+++.+||+.+|++|||+.
T Consensus 238 ~p~~~~~-----~~~~---------~~~~~~---~~---~~~----------~~~~~~~~~~~li~~cl~~~p~~Rps~~ 287 (304)
T cd05101 238 SPYPGIP-----VEEL---------FKLLKE---GH---RMD----------KPANCTNELYMMMRDCWHAIPSHRPTFK 287 (304)
T ss_pred CCcccCC-----HHHH---------HHHHHc---CC---cCC----------CCCCCCHHHHHHHHHHcccChhhCCCHH
Confidence 8875421 1111 111100 00 000 0012345688899999999999999999
Q ss_pred HHHHHHHHhhhh
Q 001782 996 DVVAKLCSARKI 1007 (1013)
Q Consensus 996 evl~~L~~~~~~ 1007 (1013)
|+++.|+.+...
T Consensus 288 e~l~~l~~~~~~ 299 (304)
T cd05101 288 QLVEDLDRILTL 299 (304)
T ss_pred HHHHHHHHHHHh
Confidence 999999988654
No 188
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=3.5e-34 Score=309.34 Aligned_cols=254 Identities=29% Similarity=0.489 Sum_probs=199.9
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
.++|++.++||+|+||.||+|.+. ++..||+|.+..... ..+.+.+|+.++++++||+++++++++. ....+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~ 76 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS------EEPIY 76 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC------CCCcE
Confidence 458999999999999999999876 556799999874333 3467899999999999999999999852 24578
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
++|||+++++|.+++..... ..+++.+++.++.|++.|++|||+. +++||||||+||++++++.+||+|||.+
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~ 149 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEG----RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLA 149 (260)
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceee
Confidence 99999999999999976422 4689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
..+...... ......++..|+|||+..+..++.++||||||+++|||++ |..||......
T Consensus 150 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~------------ 210 (260)
T cd05070 150 RLIEDNEYT-------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR------------ 210 (260)
T ss_pred eeccCcccc-------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH------------
Confidence 765322110 1122335678999999988899999999999999999999 88998653111
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
+..+.+... . ++. .....+..+.+++.+|++.+|++|||++++.+.|++
T Consensus 211 --~~~~~~~~~---~---~~~----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 211 --EVLEQVERG---Y---RMP----------CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --HHHHHHHcC---C---CCC----------CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 011111100 0 000 001224568899999999999999999999998875
No 189
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.1e-34 Score=322.77 Aligned_cols=200 Identities=26% Similarity=0.364 Sum_probs=170.2
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCC-CCccceEEEEeecCCccccce
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIR-HRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 775 (1013)
+|+..+.||+|+||+||+|++..+++.||+|++.... ....+.+..|.++++.+. |++|+++++++ ...+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF-----QTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE-----ecCCE
Confidence 4677899999999999999999999999999987432 233456778889988885 57777888874 44578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++|+|.+++... +.+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~------~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQV------GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccc
Confidence 99999999999999999765 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
+++..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 147 ~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~ 204 (323)
T cd05615 147 MCKEHMVD--------GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 204 (323)
T ss_pred cccccCCC--------CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCC
Confidence 98743211 11123456899999999999999999999999999999999999999753
No 190
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.7e-34 Score=313.49 Aligned_cols=252 Identities=24% Similarity=0.320 Sum_probs=196.8
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
++|++.++||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++. ..+..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFF-----VENRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----ECCEEE
Confidence 36888999999999999999998899999999986442 223456889999999999999999999964 346788
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||++
T Consensus 76 lv~e~~~~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 76 ICTEFMDGGSLDVYR----------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred EEEecCCCCChHHhh----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 999999999986542 467788999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
...... ......|+..|+|||++.+..++.++|||||||++|+|++|+.||........... +
T Consensus 143 ~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~-------~ 205 (279)
T cd06619 143 TQLVNS----------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM-------P 205 (279)
T ss_pred eecccc----------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc-------h
Confidence 754321 12345689999999999999999999999999999999999999976322211100 0
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.. ........++...+ .......+.+++.+|++.+|++||+++|+++.
T Consensus 206 ~~---~~~~~~~~~~~~~~------------~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 206 LQ---LLQCIVDEDPPVLP------------VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HH---HHHHHhccCCCCCC------------CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00 00000000100000 00113457889999999999999999999865
No 191
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.4e-34 Score=328.35 Aligned_cols=268 Identities=24% Similarity=0.350 Sum_probs=205.0
Q ss_pred hhhhccCCCCCceeeccceEEEEEEEC-----CCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCC-CCccceEEEEeec
Q 001782 695 SKATNDFSSSNMIGQGSFGFVYRGNLG-----ENEMAVAVKVMNLKQR-GATKSFVAECEALRNIR-HRNLIKIITVCSS 767 (1013)
Q Consensus 695 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~ 767 (1013)
....++|.+.++||+|+||.||+|++. ..++.||+|+++.... ...+.+.+|++++.++. ||||++++++|.
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~- 111 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT- 111 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc-
Confidence 334567889999999999999999964 3456899999974432 22356889999999997 999999999974
Q ss_pred CCccccceEEEEEeeccCCCHHHHhhccccc-------------------------------------------------
Q 001782 768 IDFEEVDFKAIVYEYMECGSLEDWLHQSNDQ------------------------------------------------- 798 (1013)
Q Consensus 768 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------- 798 (1013)
.....++||||+++|+|.++++..+..
T Consensus 112 ----~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (401)
T cd05107 112 ----KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESA 187 (401)
T ss_pred ----cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcccc
Confidence 336789999999999999999764320
Q ss_pred -------------------------------------------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecC
Q 001782 799 -------------------------------------------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGD 835 (1013)
Q Consensus 799 -------------------------------------------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~D 835 (1013)
.....+++.+++.++.|++.||+|||+. +++|||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrd 264 (401)
T cd05107 188 DYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRD 264 (401)
T ss_pred CccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCccc
Confidence 0112467888999999999999999999 999999
Q ss_pred CCCCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-C
Q 001782 836 LKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-R 914 (1013)
Q Consensus 836 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G 914 (1013)
|||+||++++++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |
T Consensus 265 lkp~NiLl~~~~~~kL~DfGla~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g 338 (401)
T cd05107 265 LAARNVLICEGKLVKICDFGLARDIMRDSNY------ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLG 338 (401)
T ss_pred CCcceEEEeCCCEEEEEecCcceeccccccc------ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999864322111 11223456789999999998899999999999999999998 8
Q ss_pred CCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCH
Q 001782 915 RRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQM 994 (1013)
Q Consensus 915 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 994 (1013)
..||......+. ..+.+.... |+.. +..++..+.+++.+||..+|.+||++
T Consensus 339 ~~P~~~~~~~~~-------------~~~~~~~~~------~~~~----------p~~~~~~l~~li~~cl~~~P~~RPs~ 389 (401)
T cd05107 339 GTPYPELPMNEQ-------------FYNAIKRGY------RMAK----------PAHASDEIYEIMQKCWEEKFEIRPDF 389 (401)
T ss_pred CCCCCCCCchHH-------------HHHHHHcCC------CCCC----------CCCCCHHHHHHHHHHcCCChhHCcCH
Confidence 999865321110 111111100 0000 01123567899999999999999999
Q ss_pred HHHHHHHHHhh
Q 001782 995 TDVVAKLCSAR 1005 (1013)
Q Consensus 995 ~evl~~L~~~~ 1005 (1013)
+||++.|+.+.
T Consensus 390 ~ell~~L~~~~ 400 (401)
T cd05107 390 SQLVHLVGDLL 400 (401)
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 192
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-34 Score=319.20 Aligned_cols=252 Identities=22% Similarity=0.309 Sum_probs=203.1
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
...+|++.+.||.|+||.||+|.+..+++.||+|.+........+.+.+|+++++.++|||++++++++. ..+..
T Consensus 17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~ 91 (296)
T cd06655 17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL-----VGDEL 91 (296)
T ss_pred CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEe-----cCceE
Confidence 3457999999999999999999998899999999997655555677899999999999999999999864 45789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++|+||+++++|.+++... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+
T Consensus 92 ~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~ 161 (296)
T cd06655 92 FVVMEYLAGGSLTDVVTET-------CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGF 161 (296)
T ss_pred EEEEEecCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCcc
Confidence 9999999999999998653 578999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+........ ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... ....
T Consensus 162 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~----~~~~---- 225 (296)
T cd06655 162 CAQITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----RALY---- 225 (296)
T ss_pred chhcccccc--------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH----
Confidence 875433211 122346889999999999888999999999999999999999999653211 0000
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.+.. ...+ ........+..+.+++.+||..||.+||++.+++.
T Consensus 226 -----~~~~---~~~~------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 226 -----LIAT---NGTP------------ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -----HHHh---cCCc------------ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000 0000 00001123345778999999999999999999975
No 193
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.9e-34 Score=314.63 Aligned_cols=262 Identities=25% Similarity=0.399 Sum_probs=203.0
Q ss_pred hccCCCCCceeeccceEEEEEEECCC-----CeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCcc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGEN-----EMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFE 771 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 771 (1013)
.++|++.+.||+|+||.||+|.+... +..||+|.+..... .....+.+|+.+++.++||||+++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----- 79 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS----- 79 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc-----
Confidence 46899999999999999999998643 37899999864332 23456889999999999999999999964
Q ss_pred ccceEEEEEeeccCCCHHHHhhcccccc----ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQL----EVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM 847 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 847 (1013)
.....++||||+++++|.+++....... ....+++..++.++.|++.|+.|||+. +++||||||+||+++.++
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~ 156 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDL 156 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCC
Confidence 4477899999999999999997643221 123578899999999999999999999 999999999999999999
Q ss_pred ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCc
Q 001782 848 VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGL 926 (1013)
Q Consensus 848 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~ 926 (1013)
.+||+|||+++.+...... .......++..|+|||++.++.++.++|||||||++||+++ |..||......
T Consensus 157 ~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-- 228 (277)
T cd05032 157 TVKIGDFGMTRDIYETDYY------RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE-- 228 (277)
T ss_pred CEEECCcccchhhccCccc------ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--
Confidence 9999999998765432211 11223446789999999988899999999999999999998 99998642111
Q ss_pred cHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 927 TLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 927 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
. ..+.+. .......+ ..++..+.+++.+||+.+|++|||+.|+++.|++
T Consensus 229 ---~---------~~~~~~---~~~~~~~~-------------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 229 ---E---------VLKFVI---DGGHLDLP-------------ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred ---H---------HHHHHh---cCCCCCCC-------------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 0 111111 00000000 1124568899999999999999999999998863
No 194
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-34 Score=331.08 Aligned_cols=275 Identities=20% Similarity=0.244 Sum_probs=198.7
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
...|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|++++++++||||+++++++. ..+..+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~-----~~~~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRV-----VGGLTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEE-----ECCEEE
Confidence 457999999999999999999999999999999643 234678999999999999999999864 347789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+|||++. ++|.+++.... ..+++.+++.|+.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 237 lv~e~~~-~~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla 307 (461)
T PHA03211 237 LVLPKYR-SDLYTYLGARL-----RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAA 307 (461)
T ss_pred EEEEccC-CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCc
Confidence 9999996 79998886542 3689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCC------ccHHHH
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDG------LTLHEF 931 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~------~~~~~~ 931 (1013)
+........ .......||..|+|||++.+..++.++|||||||++|||++|..|+....... ......
T Consensus 308 ~~~~~~~~~------~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~ 381 (461)
T PHA03211 308 CFARGSWST------PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRI 381 (461)
T ss_pred eeccccccc------ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHH
Confidence 865332111 11234569999999999999999999999999999999999887654322110 011111
Q ss_pred HHhh------CChhH-HHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 932 AKMA------LPEKV-MEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 932 ~~~~------~~~~~-~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
+... ++... ..+...... ...+....................+.+++.+||+.||++|||+.|+++.
T Consensus 382 i~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 382 IRQAQVHVDEFPQHAGSRLVSQYRH--RAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHhhccccccCCCCcchHHHHHHHh--hhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1110 00000 000000000 0000000000111111112223457889999999999999999999864
No 195
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.1e-34 Score=308.82 Aligned_cols=250 Identities=25% Similarity=0.410 Sum_probs=194.5
Q ss_pred ceeeccceEEEEEEEC--CCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEee
Q 001782 706 MIGQGSFGFVYRGNLG--ENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEY 782 (1013)
Q Consensus 706 ~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 782 (1013)
.||+|+||.||+|.+. ..+..||+|+...... ...+.+.+|+.++++++||||+++++++. ....++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~------~~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE------AEALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc------CCCeEEEEEe
Confidence 3899999999999874 4456799999875433 23456899999999999999999999863 2467999999
Q ss_pred ccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCC
Q 001782 783 MECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPP 862 (1013)
Q Consensus 783 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 862 (1013)
+++++|.+++.... ..+++.++++++.|++.|++|||++ +++||||||+||+++.++.+||+|||++.....
T Consensus 76 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 76 ASGGPLNKFLSGKK-----DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGA 147 (257)
T ss_pred CCCCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccC
Confidence 99999999987542 4689999999999999999999999 999999999999999999999999999975543
Q ss_pred CCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCChhHH
Q 001782 863 CSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALPEKVM 941 (1013)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 941 (1013)
...... ......++..|+|||++.+..++.++|||||||++||+++ |..||...... +..
T Consensus 148 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------------~~~ 208 (257)
T cd05115 148 DDSYYK-----ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--------------EVM 208 (257)
T ss_pred Ccccee-----ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--------------HHH
Confidence 221110 1112234578999999988889999999999999999996 99999753211 111
Q ss_pred HhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 942 EIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 942 ~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
..+.+....+ . ...++.++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 209 ~~~~~~~~~~------~----------~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 209 SFIEQGKRLD------C----------PAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHCCCCCC------C----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1111110000 0 012345678999999999999999999999998865
No 196
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.8e-34 Score=318.69 Aligned_cols=204 Identities=22% Similarity=0.325 Sum_probs=164.3
Q ss_pred CCceeeccceEEEEEEEC--CCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEe
Q 001782 704 SNMIGQGSFGFVYRGNLG--ENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 704 ~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
.++||+|+||+||+|++. .+++.||+|++.... ....+.+|++++++++||||+++++++.. ..+...++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEec---CCCcEEEEEEe
Confidence 468999999999999975 456889999986432 23567899999999999999999998643 23467899999
Q ss_pred eccCCCHHHHhhcccccc---ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEe----cCCCceEEccc
Q 001782 782 YMECGSLEDWLHQSNDQL---EVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLL----DHDMVAHVGDF 854 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~~---~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DF 854 (1013)
|+. ++|.+++....... ....+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 998 68888876432211 113589999999999999999999999 99999999999999 45679999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
|+++.+..... .........||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 157 G~a~~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 157 GFARLFNSPLK-----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CceeccCCCCc-----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 99986543211 11123356789999999998774 5889999999999999999999999754
No 197
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.8e-34 Score=315.73 Aligned_cols=261 Identities=23% Similarity=0.388 Sum_probs=200.3
Q ss_pred ccCCCCCceeeccceEEEEEEECC-----CCeEEEEEEEeecccc-chhHHHHHHHHHhcCCCCccceEEEEeecCCccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGE-----NEMAVAVKVMNLKQRG-ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 772 (1013)
.+|++.+.||+|+||.||+|.+.. .++.||+|+++..... ..+.+.+|+.+++.++||||+++++++. .
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-----~ 79 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT-----K 79 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-----C
Confidence 467888999999999999998753 3578999999744332 2356889999999999999999999964 3
Q ss_pred cceEEEEEeeccCCCHHHHhhccccc----------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceE
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQ----------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVL 842 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIl 842 (1013)
....++++||+.+++|.+++...... .....+++..+.+++.|++.|++|+|++ +|+||||||+||+
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil 156 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVL 156 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheE
Confidence 46689999999999999998642110 0123588899999999999999999999 9999999999999
Q ss_pred ecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCc
Q 001782 843 LDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNM 921 (1013)
Q Consensus 843 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~ 921 (1013)
+++++.+||+|||+++........ .......+++.|+|||++.++.++.++|||||||++|||++ |..||...
T Consensus 157 ~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 230 (283)
T cd05091 157 VFDKLNVKISDLGLFREVYAADYY------KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 230 (283)
T ss_pred ecCCCceEecccccccccccchhe------eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999998865332111 11223446789999999988899999999999999999998 88888653
Q ss_pred CCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 922 FNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
... . ..+.+. ..... . ....++..+.+++.+||+.+|++||+++||++.|
T Consensus 231 ~~~-----~---------~~~~i~---~~~~~---~----------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l 280 (283)
T cd05091 231 SNQ-----D---------VIEMIR---NRQVL---P----------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRL 280 (283)
T ss_pred CHH-----H---------HHHHHH---cCCcC---C----------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHh
Confidence 111 1 111110 00000 0 0013345678999999999999999999999998
Q ss_pred HH
Q 001782 1002 CS 1003 (1013)
Q Consensus 1002 ~~ 1003 (1013)
+.
T Consensus 281 ~~ 282 (283)
T cd05091 281 RT 282 (283)
T ss_pred hC
Confidence 64
No 198
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.4e-34 Score=308.60 Aligned_cols=251 Identities=29% Similarity=0.471 Sum_probs=197.0
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
.+|++.+.||+|+||.||+|++. ++..+|+|++.... .....+.+|++++++++||||+++++++. .....++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCT-----KQRPIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEc-----CCCceEE
Confidence 46889999999999999999986 45679999886332 23456889999999999999999999853 4467899
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
||||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~ 148 (256)
T cd05059 77 VTEYMANGCLLNYLRERK-----GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLAR 148 (256)
T ss_pred EEecCCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccce
Confidence 999999999999997642 3688999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCC
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
....... .......++..|+|||.+.+..++.++||||||+++||+++ |+.||......+
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------------ 209 (256)
T cd05059 149 YVLDDQY-------TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE------------ 209 (256)
T ss_pred ecccccc-------cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH------------
Confidence 5432110 01112234568999999999999999999999999999999 899986531110
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
..+.+.... ...++ ..++..+.+++.+||..+|++|||+.|+++.|
T Consensus 210 --~~~~~~~~~---~~~~~-------------~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 210 --VVESVSAGY---RLYRP-------------KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred --HHHHHHcCC---cCCCC-------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 000000000 00000 11345688999999999999999999999886
No 199
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.1e-34 Score=317.63 Aligned_cols=268 Identities=24% Similarity=0.394 Sum_probs=204.9
Q ss_pred hhccCCCCCceeeccceEEEEEEEC-------CCCeEEEEEEEeeccc-cchhHHHHHHHHHhcC-CCCccceEEEEeec
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLG-------ENEMAVAVKVMNLKQR-GATKSFVAECEALRNI-RHRNLIKIITVCSS 767 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 767 (1013)
..++|.+.++||+|+||.||+|+.. .....||+|.+..... .....+.+|+++++++ +||||+++++++.
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~- 88 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT- 88 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc-
Confidence 3468999999999999999999863 2345799998874322 2345688999999999 6999999999864
Q ss_pred CCccccceEEEEEeeccCCCHHHHhhccccc----------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 001782 768 IDFEEVDFKAIVYEYMECGSLEDWLHQSNDQ----------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLK 837 (1013)
Q Consensus 768 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk 837 (1013)
.....++||||+++|+|.+++...... .....+++.++.+++.|++.|++|||++ |++|||||
T Consensus 89 ----~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlk 161 (314)
T cd05099 89 ----QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLA 161 (314)
T ss_pred ----cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeecccc
Confidence 346789999999999999999764321 1124589999999999999999999999 99999999
Q ss_pred CCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCC
Q 001782 838 PSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRR 916 (1013)
Q Consensus 838 p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~ 916 (1013)
|+||+++.++.+||+|||.++......... ......++..|+|||++.++.++.++|||||||++|||++ |..
T Consensus 162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~ 235 (314)
T cd05099 162 ARNVLVTEDNVMKIADFGLARGVHDIDYYK------KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGS 235 (314)
T ss_pred ceeEEEcCCCcEEEcccccccccccccccc------ccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCC
Confidence 999999999999999999998654321111 0111234567999999998899999999999999999999 888
Q ss_pred CCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 001782 917 PTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTD 996 (1013)
Q Consensus 917 pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 996 (1013)
||..... . +..+.+.... ++. ....++..+.+++.+|++.+|++|||+.|
T Consensus 236 p~~~~~~-----~---------~~~~~~~~~~------~~~----------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 285 (314)
T cd05099 236 PYPGIPV-----E---------ELFKLLREGH------RMD----------KPSNCTHELYMLMRECWHAVPTQRPTFKQ 285 (314)
T ss_pred CCCCCCH-----H---------HHHHHHHcCC------CCC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 9865311 0 1111111000 000 00122446788999999999999999999
Q ss_pred HHHHHHHhhhhh
Q 001782 997 VVAKLCSARKIF 1008 (1013)
Q Consensus 997 vl~~L~~~~~~~ 1008 (1013)
+++.|+++....
T Consensus 286 ll~~l~~~~~~~ 297 (314)
T cd05099 286 LVEALDKVLAAV 297 (314)
T ss_pred HHHHHHHHHHHh
Confidence 999999987654
No 200
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.4e-34 Score=318.68 Aligned_cols=269 Identities=22% Similarity=0.362 Sum_probs=201.2
Q ss_pred hccCCCCCceeeccceEEEEEEECC----------------CCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccce
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGE----------------NEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIK 760 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 760 (1013)
.++|++.++||+|+||.||+|++.. +...||+|++..... ....++.+|+.+++.++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 4579999999999999999986532 345689999874432 23467899999999999999999
Q ss_pred EEEEeecCCccccceEEEEEeeccCCCHHHHhhccccc-----cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecC
Q 001782 761 IITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQ-----LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGD 835 (1013)
Q Consensus 761 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~D 835 (1013)
+++++. ..+..++||||+++++|.+++...... .....+++.++..++.|++.|++|||+. +++|||
T Consensus 84 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~d 155 (296)
T cd05095 84 LLAVCI-----TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRD 155 (296)
T ss_pred EEEEEe-----cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ceeccc
Confidence 999964 346689999999999999999764321 1123578889999999999999999999 999999
Q ss_pred CCCCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh--
Q 001782 836 LKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-- 913 (1013)
Q Consensus 836 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-- 913 (1013)
|||+||+++.++.+||+|||+++.+...... .......++..|+|||+..++.++.++|||||||++|||++
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~ 229 (296)
T cd05095 156 LATRNCLVGKNYTIKIADFGMSRNLYSGDYY------RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLC 229 (296)
T ss_pred CChheEEEcCCCCEEeccCcccccccCCcce------eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhC
Confidence 9999999999999999999999765332111 11122344678999999888899999999999999999998
Q ss_pred CCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCC
Q 001782 914 RRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQ 993 (1013)
Q Consensus 914 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 993 (1013)
|..||....... ... ...+.......... .+....++..+.+++.+||+.||++||+
T Consensus 230 ~~~p~~~~~~~~-----~~~-----~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~ 286 (296)
T cd05095 230 KEQPYSQLSDEQ-----VIE-----NTGEFFRDQGRQVY-------------LPKPALCPDSLYKLMLSCWRRNAKERPS 286 (296)
T ss_pred CCCCccccChHH-----HHH-----HHHHHHhhcccccc-------------CCCCCCCCHHHHHHHHHHcCCCcccCCC
Confidence 778886532111 100 00010000000000 0000123456889999999999999999
Q ss_pred HHHHHHHHHH
Q 001782 994 MTDVVAKLCS 1003 (1013)
Q Consensus 994 ~~evl~~L~~ 1003 (1013)
+.||.+.|++
T Consensus 287 ~~~i~~~l~~ 296 (296)
T cd05095 287 FQEIHATLLE 296 (296)
T ss_pred HHHHHHHHhC
Confidence 9999999863
No 201
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2e-34 Score=315.25 Aligned_cols=252 Identities=24% Similarity=0.338 Sum_probs=198.1
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.|+..++||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.++++++|++++++++.+. ..+..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYE-----TKDAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEe-----cCCEE
Confidence 36778899999999999999999999999999864322 12345778999999999999999999853 44789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+++++|.+++..... ..+++.++..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||+
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMGE----AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGL 148 (285)
T ss_pred EEEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccc
Confidence 999999999999999865432 3689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+....... ......|+..|+|||++.+..++.++||||+||++|+|++|+.||........ ...
T Consensus 149 ~~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~~------ 212 (285)
T cd05630 149 AVHVPEGQ---------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REE------ 212 (285)
T ss_pred eeecCCCc---------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HHH------
Confidence 87543211 12234689999999999999999999999999999999999999976322110 000
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCC-----HHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQ-----MTDVVA 999 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 999 (1013)
........ +.. ........+.+++.+||+.||++||| +.|+++
T Consensus 213 ---~~~~~~~~----~~~-------------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 213 ---VERLVKEV----QEE-------------YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred ---HHhhhhhh----hhh-------------cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 00110000 000 00112345788999999999999999 888876
No 202
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=9.9e-35 Score=323.50 Aligned_cols=194 Identities=29% Similarity=0.363 Sum_probs=164.1
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHH-HHhcCCCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECE-ALRNIRHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
++||+|+||.||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++ .+.+..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF-----QTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCEEEEEE
Confidence 47999999999999999899999999987432 122334555554 57889999999999885 4457899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++++|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 76 DYVNGGELFFHLQRE------RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred cCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 999999999888754 4688899999999999999999999 9999999999999999999999999998742
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 198 (321)
T cd05603 147 VEP--------EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (321)
T ss_pred CCC--------CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCC
Confidence 111 1123345689999999999998999999999999999999999999965
No 203
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.4e-34 Score=319.09 Aligned_cols=268 Identities=21% Similarity=0.352 Sum_probs=202.1
Q ss_pred hccCCCCCceeeccceEEEEEEECCCC----------------eEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccce
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENE----------------MAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIK 760 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----------------~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 760 (1013)
.++|++.+.||+|+||.||+|++...+ ..||+|++..... ...+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 468999999999999999999876433 5689999874432 33567889999999999999999
Q ss_pred EEEEeecCCccccceEEEEEeeccCCCHHHHhhcccccc-----ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecC
Q 001782 761 IITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQL-----EVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGD 835 (1013)
Q Consensus 761 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~D 835 (1013)
+++++. .+...+++|||+++++|.+++....... ....+++..++.++.|++.|++|||++ +++|||
T Consensus 84 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~d 155 (296)
T cd05051 84 LLGVCT-----VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRD 155 (296)
T ss_pred EEEEEe-----cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccc
Confidence 999964 3377899999999999999997653211 113689999999999999999999999 999999
Q ss_pred CCCCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh--
Q 001782 836 LKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-- 913 (1013)
Q Consensus 836 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-- 913 (1013)
|||+||+++.++.++|+|||.++........ .......++..|+|||++.++.++.++|||||||++|||++
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 229 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYY------RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLC 229 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcce------eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcC
Confidence 9999999999999999999998754322111 11223456788999999988899999999999999999998
Q ss_pred CCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCC
Q 001782 914 RRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQ 993 (1013)
Q Consensus 914 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 993 (1013)
|..||....... .+... .+..... . .+ ...+....++..+.+++.+|++.||.+|||
T Consensus 230 ~~~p~~~~~~~~-~~~~~---------~~~~~~~---~--~~--------~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt 286 (296)
T cd05051 230 REQPYEHLTDQQ-VIENA---------GHFFRDD---G--RQ--------IYLPRPPNCPKDIYELMLECWRRDEEDRPT 286 (296)
T ss_pred CCCCCCCcChHH-HHHHH---------Hhccccc---c--cc--------ccCCCccCCCHHHHHHHHHHhccChhcCCC
Confidence 677775432110 00000 0000000 0 00 000001122356899999999999999999
Q ss_pred HHHHHHHHH
Q 001782 994 MTDVVAKLC 1002 (1013)
Q Consensus 994 ~~evl~~L~ 1002 (1013)
+.||++.|+
T Consensus 287 ~~el~~~L~ 295 (296)
T cd05051 287 FREIHLFLQ 295 (296)
T ss_pred HHHHHHHhc
Confidence 999999886
No 204
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.6e-35 Score=325.71 Aligned_cols=239 Identities=23% Similarity=0.293 Sum_probs=189.0
Q ss_pred CceeeccceEEEEEEE---CCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEE
Q 001782 705 NMIGQGSFGFVYRGNL---GENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIV 779 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~---~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 779 (1013)
+.||+|+||.||++++ ..+++.||+|++..... .....+.+|++++++++||||+++++++. .++..++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQ-----TEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEE-----cCCEEEEE
Confidence 6799999999999986 35688999999974322 22345778999999999999999999853 45789999
Q ss_pred EeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccccc
Q 001782 780 YEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARF 859 (1013)
Q Consensus 780 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 859 (1013)
|||+++++|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 77 ~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 77 LDFLRGGDLFTRLSKE------VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EcCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 9999999999998764 4689999999999999999999999 999999999999999999999999999875
Q ss_pred CCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChh
Q 001782 860 LPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEK 939 (1013)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~ 939 (1013)
.... ........|++.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 148 ~~~~--------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-----~~-------- 206 (318)
T cd05582 148 SIDH--------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK-----ET-------- 206 (318)
T ss_pred cCCC--------CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH-----HH--------
Confidence 4321 11223457899999999999888999999999999999999999999753110 00
Q ss_pred HHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 001782 940 VMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTD 996 (1013)
Q Consensus 940 ~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 996 (1013)
...+....... | ...+..+.+++.+||+.||++||++.+
T Consensus 207 ~~~i~~~~~~~-p-----------------~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 207 MTMILKAKLGM-P-----------------QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHcCCCCC-C-----------------CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 00111000000 0 112345678999999999999999655
No 205
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=8e-35 Score=329.46 Aligned_cols=209 Identities=22% Similarity=0.341 Sum_probs=176.4
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|+.++..++||+|+++++.+ .+.+.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 46888999999999999999999999999999997432 23345678899999999999999999985 45578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++|+|.+++... +.+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~------~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKK------DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred EEEEEeCCCCccHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeecc
Confidence 99999999999999999765 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccc---------------------------cCCCCCcccccccccccccccCCCCCCcccchHHHHHHH
Q 001782 856 LARFLPPCSPATIL---------------------------ETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILL 908 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~---------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il 908 (1013)
++..+......... .........+||+.|+|||++.+..++.++|||||||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 98755322110000 000012245799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCc
Q 001782 909 LEMFTRRRPTDNM 921 (1013)
Q Consensus 909 ~ell~G~~pf~~~ 921 (1013)
|||++|+.||...
T Consensus 227 yel~tG~~Pf~~~ 239 (360)
T cd05627 227 YEMLIGYPPFCSE 239 (360)
T ss_pred eecccCCCCCCCC
Confidence 9999999999753
No 206
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.7e-34 Score=314.82 Aligned_cols=275 Identities=22% Similarity=0.309 Sum_probs=199.0
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.+.||+|++|.||+|++..++..||+|++..... ...+.+.+|+.++++++||||+++++++. .+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-----QESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-----eCCeEE
Confidence 57888999999999999999998999999999874432 23456889999999999999999999964 457889
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||++ ++|.+++..... ...+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPK---GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred EEEecCC-CCHHHHHhcCCC---CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccce
Confidence 9999998 789988875432 14689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
....... .......+++.|+|||++.+. .++.++|||||||++|||++|+.||........... ......
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~-~~~~~~ 219 (285)
T cd07861 149 RAFGIPV--------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFR-IFRILG 219 (285)
T ss_pred eecCCCc--------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HHHHhC
Confidence 7543211 112234568899999987654 578899999999999999999999975322111111 000000
Q ss_pred C--hhHHHhhhhhhccchhhhhccCCCCch-hHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 P--EKVMEIVDPLLLLDLEARASNCGSHRT-EIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 ~--~~~~~~i~~~l~~~~~~R~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
. +........ ..++ +......... ..........++.+++.+|+..||++|||+.||++
T Consensus 220 ~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 220 TPTEDVWPGVTS--LPDY--KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred CCChhhhhcchh--hHHH--HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 000000000 0000 0000000000 00011123456789999999999999999999975
No 207
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.5e-34 Score=317.74 Aligned_cols=270 Identities=20% Similarity=0.257 Sum_probs=208.8
Q ss_pred CcchhhhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcC-CCCccceEEEEee
Q 001782 688 MVSYADLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNI-RHRNLIKIITVCS 766 (1013)
Q Consensus 688 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 766 (1013)
.+++.++..+.++|++.+.||+|+||.||+|....+++.+|+|++.... .....+.+|+.+++++ +|||++++++++.
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 3566777888999999999999999999999999899999999986432 2345678899999998 7999999999986
Q ss_pred cCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC
Q 001782 767 SIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD 846 (1013)
Q Consensus 767 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 846 (1013)
..+.......++||||+++++|.++++.... ....+++..++.++.|++.|++|||+. +++||||||+||+++.+
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~ 164 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLI--CGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTE 164 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCC
Confidence 5433344678999999999999998864321 124688999999999999999999999 99999999999999999
Q ss_pred CceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCC-----CCCcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 847 MVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-----DMSATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 847 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
+.+||+|||.+........ ......|+..|+|||++... .++.++|||||||++|||++|+.||...
T Consensus 165 ~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~ 236 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRL--------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM 236 (291)
T ss_pred CCEEEeecccchhcccccc--------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCC
Confidence 9999999999875532111 12234578999999987643 3688999999999999999999998753
Q ss_pred CCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 922 FNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
... ... .++.. ..+ .+ ....++....+.+++.+||+.+|++||++.|+++
T Consensus 237 ~~~----~~~---------~~~~~----~~~-~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 237 HPV----KTL---------FKIPR----NPP-PT----------LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred cHH----HHH---------HHHhc----CCC-CC----------CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 211 000 00000 000 00 0001122345789999999999999999999986
No 208
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.2e-34 Score=317.14 Aligned_cols=274 Identities=22% Similarity=0.365 Sum_probs=203.7
Q ss_pred ccCCCCCceeeccceEEEEEEE----CCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNL----GENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
.-|++.+.||+|+||.||+|+. ..++..||+|.++... ....+.+.+|++++++++|||++++++++.. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 80 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGG 80 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEec---CCC
Confidence 3578899999999999999985 3467889999987443 2334678999999999999999999998743 224
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++||||+++++|.+++.... ..+++.++..++.|++.|++|||++ |++||||||+||+++.++.+||+|
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~d 152 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNK-----NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 152 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECC
Confidence 66899999999999999997542 3579999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||+++.+....... .......++..|+|||++.+..++.++|||||||++|||+++..|+...... ......
T Consensus 153 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~---~~~~~~ 224 (284)
T cd05079 153 FGLTKAIETDKEYY-----TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL---FLKMIG 224 (284)
T ss_pred CccccccccCccce-----eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch---hhhhcc
Confidence 99998654322110 1122345678899999998889999999999999999999988765431110 000000
Q ss_pred hhCCh-hHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 934 MALPE-KVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 934 ~~~~~-~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
....+ .....+...... .+.. ....++..+.+++.+|++.+|++|||+.++++.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~---~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 225 PTHGQMTVTRLVRVLEEG---KRLP----------RPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cccccccHHHHHHHHHcC---ccCC----------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 00000 001111000000 0000 0112345788999999999999999999999999876
No 209
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.9e-34 Score=317.47 Aligned_cols=252 Identities=22% Similarity=0.278 Sum_probs=203.3
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
...+|++.+.||+|+||.||+|.+..+++.||+|.+........+.+.+|+.+++.++||||+++++++. .+...
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~ 91 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDEL 91 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCEE
Confidence 3478999999999999999999998899999999997655555677889999999999999999999964 45788
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+++++|.+++... .+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||.
T Consensus 92 ~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~ 161 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 161 (297)
T ss_pred EEeecccCCCCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCcc
Confidence 9999999999999998653 578889999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+....+... ......+++.|+|||.+.+..++.++|||||||++|++++|..||..........
T Consensus 162 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~-------- 225 (297)
T cd06656 162 CAQITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-------- 225 (297)
T ss_pred ceEccCCcc--------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee--------
Confidence 875433211 1223467889999999999889999999999999999999999996532111000
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.......+ . .......+..+.+++.+||+.+|++||+++++++
T Consensus 226 --------~~~~~~~~----~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 226 --------LIATNGTP----E--------LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred --------eeccCCCC----C--------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000000 0 0001122345678999999999999999999987
No 210
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.7e-34 Score=310.70 Aligned_cols=255 Identities=23% Similarity=0.324 Sum_probs=204.1
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
.++|++.++||+|+||.||+|.+..+++.+|+|++........+.+.+|++++++++||||+++++++ ......+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 76 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY-----LRRDKLW 76 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEE-----EeCCEEE
Confidence 46889999999999999999999888899999999866555667899999999999999999999985 3457899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
++|||+++++|.+++.... ..+++.++..++.|++.|++|||++ +++||||+|+||+++.++.+||+|||.+
T Consensus 77 l~~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 148 (262)
T cd06613 77 IVMEYCGGGSLQDIYQVTR-----GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVS 148 (262)
T ss_pred EEEeCCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccc
Confidence 9999999999999987642 3688999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCC---CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG---DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
....... .......++..|+|||.+.+. .++.++|||||||++|||++|+.||..........
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~------ 214 (262)
T cd06613 149 AQLTATI--------AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF------ 214 (262)
T ss_pred hhhhhhh--------hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH------
Confidence 7543211 112335678899999998776 88999999999999999999999997532111000
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
....... .+ + ........+..+.+++.+||..+|.+|||+.+|+.
T Consensus 215 -------~~~~~~~--~~---~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 215 -------LISKSNF--PP---P--------KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -------HHHhccC--CC---c--------cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000 00 0 00011223456889999999999999999999975
No 211
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.2e-34 Score=315.75 Aligned_cols=265 Identities=24% Similarity=0.397 Sum_probs=201.9
Q ss_pred hhccCCCCCceeeccceEEEEEEEC-----CCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLG-----ENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDF 770 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 770 (1013)
..++|++.++||+|+||.||+|... ..+..||+|.+..... .....+.+|+.++++++||||+++++++.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~---- 79 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS---- 79 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----
Confidence 4678999999999999999999764 2356799998763322 22345788999999999999999999854
Q ss_pred cccceEEEEEeeccCCCHHHHhhcccccc----ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC
Q 001782 771 EEVDFKAIVYEYMECGSLEDWLHQSNDQL----EVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD 846 (1013)
Q Consensus 771 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 846 (1013)
.....++||||+++|+|.+++....... .....++..+..++.|++.|++|||++ +|+||||||+||+++++
T Consensus 80 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~ 155 (288)
T cd05061 80 -KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 155 (288)
T ss_pred -CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCC
Confidence 3467899999999999999997643211 113456778899999999999999999 99999999999999999
Q ss_pred CceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCC
Q 001782 847 MVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDG 925 (1013)
Q Consensus 847 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~ 925 (1013)
+.+||+|||+++......... ......++..|+|||.+.++.++.++|||||||++|||++ |..||......
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~- 228 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDYYR------KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE- 228 (288)
T ss_pred CcEEECcCCcccccccccccc------ccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 999999999988553322111 1122345678999999999999999999999999999998 78888653111
Q ss_pred ccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhh
Q 001782 926 LTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSAR 1005 (1013)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1005 (1013)
.... .+.+...... ...++..+.+++.+|++.||++|||+.|+++.+++..
T Consensus 229 ----~~~~--------~~~~~~~~~~-----------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 229 ----QVLK--------FVMDGGYLDQ-----------------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred ----HHHH--------HHHcCCCCCC-----------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1100 0000000000 0122456889999999999999999999999998754
No 212
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.6e-34 Score=313.21 Aligned_cols=277 Identities=21% Similarity=0.292 Sum_probs=201.4
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++|||++++++++. .....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR-----RKRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe-----eCCEE
Confidence 478999999999999999999998899999999864332 22356789999999999999999999853 45788
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||++++++..+.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 76 ~~v~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNP------RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred EEEEeccCccHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccc
Confidence 9999999988888877543 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh-
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM- 934 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~- 934 (1013)
+........ ......++..|+|||++.+ ..++.++||||||+++|||++|+.||......+. .......
T Consensus 147 ~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~ 217 (286)
T cd07847 147 ARILTGPGD--------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYLIRKTL 217 (286)
T ss_pred ceecCCCcc--------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHh
Confidence 986543211 1223457889999999876 4578899999999999999999999975432211 1111100
Q ss_pred -hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 -ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 -~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
...+...+..+..-.... ...................+..+.+++.+||+.+|++||++.|++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 218 GDLIPRHQQIFSTNQFFKG-LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CCCChHHhhhccccccccc-ccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000111111000000000 0000000000001111223567889999999999999999999875
No 213
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-36 Score=322.09 Aligned_cols=252 Identities=22% Similarity=0.325 Sum_probs=207.4
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
+-|.++..||.|+||.||+|..+.++...|.|++......+.+++.-|++||..++||+|+++++.|+ .++..|+
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy-----~enkLwi 106 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYY-----FENKLWI 106 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHh-----ccCceEE
Confidence 45677889999999999999999888888999999888888899999999999999999999999853 4578999
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
+.|||.||-.+.++-.-. ..+.+.++..++.|++.||.|||++ .|||||+|+.|||++-+|.++|+|||.+.
T Consensus 107 liEFC~GGAVDaimlEL~-----r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSA 178 (1187)
T KOG0579|consen 107 LIEFCGGGAVDAIMLELG-----RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSA 178 (1187)
T ss_pred EEeecCCchHhHHHHHhc-----cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccc
Confidence 999999999999887653 4789999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGM-----GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
... ........+.|||+|||||+.. ..+|++++||||||+++.||..+.+|-.....
T Consensus 179 Kn~--------~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp---------- 240 (1187)
T KOG0579|consen 179 KNK--------STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP---------- 240 (1187)
T ss_pred cch--------hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch----------
Confidence 432 2223355788999999999854 46899999999999999999999999654311
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..++-+.-..+| +.+-++......+.+++.+|+..||..||+++++++
T Consensus 241 -------MRVllKiaKSeP-----------PTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 241 -------MRVLLKIAKSEP-----------PTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred -------HHHHHHHhhcCC-----------CcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 111111111111 111222344567889999999999999999999975
No 214
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=319.24 Aligned_cols=253 Identities=25% Similarity=0.345 Sum_probs=208.0
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc---chhHHHHHHHHHhcCC-CCccceEEEEeecCCccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG---ATKSFVAECEALRNIR-HRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 772 (1013)
....|++.+.||+|.||.||+++.+.+|+.+|+|++...... ..+.+.+|+.+|+++. ||||+.+++++ +.
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~-----e~ 107 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF-----ED 107 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE-----Ec
Confidence 456899999999999999999999999999999999754432 3457899999999998 99999999995 55
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC----Cc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD----MV 848 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~ 848 (1013)
....++|||++.||.|.+.+... .+++.++..++.|++.|++|+|+. ||+|||+||+|+|+... +.
T Consensus 108 ~~~~~lvmEL~~GGeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 108 PDSVYLVMELCEGGELFDRIVKK-------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred CCeEEEEEEecCCchHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCc
Confidence 57999999999999999999875 289999999999999999999999 99999999999999643 47
Q ss_pred eEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccH
Q 001782 849 AHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTL 928 (1013)
Q Consensus 849 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~ 928 (1013)
+|++|||+|....+ .......+||+.|+|||++....|+..+||||+|+++|.|++|.+||..........
T Consensus 178 ik~~DFGla~~~~~---------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~ 248 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKP---------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL 248 (382)
T ss_pred EEEeeCCCceEccC---------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH
Confidence 99999999987643 233567889999999999999999999999999999999999999998643221111
Q ss_pred HHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 929 HEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 929 ~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.+... ++ ....+.+........++++.|+..||.+|+|+.++++.
T Consensus 249 -------------~i~~~----~~----------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 249 -------------AILRG----DF----------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred -------------HHHcC----CC----------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11111 11 00111122335567889999999999999999999874
No 215
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=321.99 Aligned_cols=255 Identities=25% Similarity=0.404 Sum_probs=207.6
Q ss_pred cCCCCCceeeccceEEEEEEECC---CCeEEEEEEEeecccc-chhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGE---NEMAVAVKVMNLKQRG-ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
+....++||+|.||.||+|.|.. +-..||||.++..... ...+|.+|+.+|.+++|||++++||+..+ ..
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~------qp 184 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD------QP 184 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc------ch
Confidence 44556899999999999999943 3356899999866544 56789999999999999999999999632 45
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
..+|||.++.|+|.+.++.... ..+.......++.|||.||.||.++ +.||||+.++|+++.....|||+|||
T Consensus 185 ~mMV~ELaplGSLldrLrka~~----~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFG 257 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRKAKK----AILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFG 257 (1039)
T ss_pred hhHHhhhcccchHHHHHhhccc----cceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeeccc
Confidence 6799999999999999998432 5788889999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
+.+-++.....+.+.. ...-...|+|||.+....++.++|||+|||++|||++ |..||.....
T Consensus 258 LmRaLg~ned~Yvm~p-----~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g----------- 321 (1039)
T KOG0199|consen 258 LMRALGENEDMYVMAP-----QRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG----------- 321 (1039)
T ss_pred ceeccCCCCcceEecC-----CCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH-----------
Confidence 9998876655443322 2334678999999999999999999999999999998 8899976311
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
..+.+.+| .. .+++..+.|++.+++++++||...|.+|||+..+.+.+-
T Consensus 322 ---~qIL~~iD------~~----------erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 322 ---IQILKNID------AG----------ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred ---HHHHHhcc------cc----------ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 01111111 11 122334578899999999999999999999999985543
No 216
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.4e-34 Score=309.96 Aligned_cols=254 Identities=25% Similarity=0.397 Sum_probs=200.2
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccc---------hhHHHHHHHHHhcCCCCccceEEEEeecCCc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGA---------TKSFVAECEALRNIRHRNLIKIITVCSSIDF 770 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 770 (1013)
+|.+.+.||+|++|.||+|.+..+++.||+|.+....... .+.+.+|++++++++||||+++++++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---- 76 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL---- 76 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE----
Confidence 5788899999999999999998888999999886433221 245788999999999999999999853
Q ss_pred cccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceE
Q 001782 771 EEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAH 850 (1013)
Q Consensus 771 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 850 (1013)
.....++||||+++++|.+++... +.+++..+..++.|++.|++|||+. +++||||+|+||++++++.+|
T Consensus 77 -~~~~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 77 -DADHLNIFLEYVPGGSVAALLNNY------GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred -eCCccEEEEEecCCCCHHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEE
Confidence 447889999999999999999765 4678889999999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHH
Q 001782 851 VGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHE 930 (1013)
Q Consensus 851 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~ 930 (1013)
|+|||.++......... ..........|+..|+|||.+.+..++.++||||+||++|+|++|+.||..... ...
T Consensus 147 l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~ 220 (267)
T cd06628 147 ISDFGISKKLEANSLST--KTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ----LQA 220 (267)
T ss_pred ecccCCCcccccccccC--CccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH----HHH
Confidence 99999998664321111 011112335588999999999998999999999999999999999999975311 011
Q ss_pred HHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 931 FAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 931 ~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
. ...... .++.. ....+..+.+++.+||+.||.+||++.||++
T Consensus 221 ~---------~~~~~~-------~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 221 I---------FKIGEN-------ASPEI----------PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred H---------HHHhcc-------CCCcC----------CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0 000000 00000 0122456788999999999999999999986
No 217
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.3e-34 Score=314.93 Aligned_cols=253 Identities=23% Similarity=0.296 Sum_probs=196.8
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.|+..+.||+|+||+||+|.+..+++.||+|++..... .....+.+|++++++++|++|+++.+++ ..++..
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~ 75 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEE-----ecCCEE
Confidence 36677899999999999999999999999999864321 2234577899999999999999999885 345789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+++++|.+++..... ..+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~ 148 (285)
T cd05632 76 CLVLTIMNGGDLKFHIYNMGN----PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred EEEEEeccCccHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCc
Confidence 999999999999988865422 3689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+....... ......|+..|+|||++.+..++.++||||+||++|||++|..||........ .....
T Consensus 149 ~~~~~~~~---------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~~---- 214 (285)
T cd05632 149 AVKIPEGE---------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEVD---- 214 (285)
T ss_pred ceecCCCC---------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH----
Confidence 87543211 12234689999999999988999999999999999999999999975321100 00000
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCC-----HHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQ-----MTDVVAK 1000 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 1000 (1013)
.......+. .....+..+.+++..|++.||++||+ +.+++..
T Consensus 215 --------~~~~~~~~~--------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 215 --------RRVLETEEV--------------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred --------Hhhhccccc--------------cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 000000000 00112345678999999999999999 6666653
No 218
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.9e-34 Score=315.91 Aligned_cols=275 Identities=20% Similarity=0.309 Sum_probs=198.3
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.+.||+|+||.||+|++..+++.||+|++..... .....+.+|++++++++||||+++++++ .+....+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL-----HSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh-----ccCCceE
Confidence 58888999999999999999999999999999874322 2235678899999999999999999984 4557899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+|+||++ ++|.+++.... ..+++..++.++.||++||.|||++ +++||||||+||+++.++.+||+|||++
T Consensus 76 lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 76 LVFEYCD-QDLKKYFDSCN-----GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred EEEecCC-CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchh
Confidence 9999998 68888876532 4689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+...... .......++..|+|||++.+. .++.++|||||||++|||++|+.|+..................
T Consensus 147 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 218 (284)
T cd07839 147 RAFGIPV--------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 218 (284)
T ss_pred hccCCCC--------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhC
Confidence 7543211 112234578899999998765 4789999999999999999999987543222211211111111
Q ss_pred ChhHHH--hhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 PEKVME--IVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 ~~~~~~--~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
...... .+... .+....+. ......-.+........+.+++.+||+.||.+|||++|+++
T Consensus 219 ~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 219 TPTEESWPGVSKL--PDYKPYPM-YPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCChHHhHHhhhc--ccccccCC-CCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 100000 00000 00000000 00000000111123456788999999999999999999975
No 219
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.5e-34 Score=315.35 Aligned_cols=268 Identities=22% Similarity=0.346 Sum_probs=199.3
Q ss_pred hccCCCCCceeeccceEEEEEEECCC--------------CeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGEN--------------EMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKII 762 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~--------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~ 762 (1013)
.++|++.++||+|+||.||+|++.+. ...||+|+++.... .....+.+|++++++++|||+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 46899999999999999999987543 23589999874422 2345688999999999999999999
Q ss_pred EEeecCCccccceEEEEEeeccCCCHHHHhhccccc------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCC
Q 001782 763 TVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQ------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDL 836 (1013)
Q Consensus 763 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dl 836 (1013)
+++. .....++||||+++++|.+++...... .....+++.+++.++.|++.|++|||++ +++||||
T Consensus 84 ~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dl 155 (295)
T cd05097 84 GVCV-----SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDL 155 (295)
T ss_pred EEEc-----CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---Ceecccc
Confidence 9964 446789999999999999999653211 1112478899999999999999999999 9999999
Q ss_pred CCCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh--C
Q 001782 837 KPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT--R 914 (1013)
Q Consensus 837 kp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~--G 914 (1013)
||+||+++.++.+||+|||++......... .......++..|+|||+..++.++.++|||||||++|||++ |
T Consensus 156 kp~Nill~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~ 229 (295)
T cd05097 156 ATRNCLVGNHYTIKIADFGMSRNLYSGDYY------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCK 229 (295)
T ss_pred ChhhEEEcCCCcEEecccccccccccCcce------eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCC
Confidence 999999999999999999998754322111 11223345788999999998899999999999999999998 6
Q ss_pred CCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCH
Q 001782 915 RRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQM 994 (1013)
Q Consensus 915 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 994 (1013)
..||....... ..... .+..+......+... ....+..+.+++.+|++.||++|||+
T Consensus 230 ~~p~~~~~~~~-~~~~~---------~~~~~~~~~~~~~~~-------------~~~~~~~l~~li~~~l~~~p~~RPs~ 286 (295)
T cd05097 230 EQPYSLLSDEQ-VIENT---------GEFFRNQGRQIYLSQ-------------TPLCPSPVFKLMMRCWSRDIKDRPTF 286 (295)
T ss_pred CCCCcccChHH-HHHHH---------HHhhhhccccccCCC-------------CCCCCHHHHHHHHHHcCCCchhCcCH
Confidence 66776432110 00000 000000000000000 00123568999999999999999999
Q ss_pred HHHHHHHH
Q 001782 995 TDVVAKLC 1002 (1013)
Q Consensus 995 ~evl~~L~ 1002 (1013)
++|++.|+
T Consensus 287 ~~i~~~l~ 294 (295)
T cd05097 287 NKIHHFLR 294 (295)
T ss_pred HHHHHHHh
Confidence 99999886
No 220
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.5e-34 Score=311.95 Aligned_cols=259 Identities=28% Similarity=0.493 Sum_probs=201.7
Q ss_pred hccCCCCCceeeccceEEEEEEECCCC---eEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENE---MAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
.++|+..+.||+|+||.||+|++..++ ..||+|.++... ....+.+.+|++++++++|||++++.+++. ..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 78 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT-----KF 78 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc-----cC
Confidence 357888899999999999999986544 379999886442 233467889999999999999999999964 44
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
+..++||||+++++|.+++.... +.+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~d 150 (268)
T cd05063 79 KPAMIITEYMENGALDKYLRDHD-----GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSD 150 (268)
T ss_pred CCcEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECC
Confidence 67899999999999999997542 4689999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~ 932 (1013)
||++........... .......+..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 151 fg~~~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-------- 217 (268)
T cd05063 151 FGLSRVLEDDPEGTY-----TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-------- 217 (268)
T ss_pred Cccceecccccccce-----eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--------
Confidence 999876543221110 0111223567999999998889999999999999999997 99998643110
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
+....+.... +... ...++..+.+++.+||+.+|++||++.+|++.|.++
T Consensus 218 ------~~~~~i~~~~------~~~~----------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 218 ------EVMKAINDGF------RLPA----------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ------HHHHHHhcCC------CCCC----------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111111000 0000 012345678999999999999999999999999876
No 221
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.9e-34 Score=315.41 Aligned_cols=251 Identities=22% Similarity=0.308 Sum_probs=197.9
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIV 779 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 779 (1013)
-|++.+.||+|+||.||+|.+..++..+++|.+........+.+.+|+++++.++||||+++++++. .+...++|
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~~v 80 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY-----YENNLWIL 80 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEe-----eCCEEEEE
Confidence 4678899999999999999999899999999987555445567889999999999999999999864 34788999
Q ss_pred EeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccccc
Q 001782 780 YEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARF 859 (1013)
Q Consensus 780 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 859 (1013)
|||+++++|..++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 81 ~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~ 152 (282)
T cd06643 81 IEFCAGGAVDAVMLELE-----RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK 152 (282)
T ss_pred EEecCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccc
Confidence 99999999999876532 4689999999999999999999999 999999999999999999999999999875
Q ss_pred CCCCCCCccccCCCCCcccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 860 LPPCSPATILETPSSSTGIKGTVGYVAPEYGM-----GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
.... ........++..|+|||++. +..++.++||||+||++|||++|+.||...... ....
T Consensus 153 ~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~~~-- 218 (282)
T cd06643 153 NTRT--------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM----RVLL-- 218 (282)
T ss_pred cccc--------ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH----HHHH--
Confidence 4321 11123456889999999874 345788999999999999999999998653211 0000
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.... ..+ +. .......+..+.+++.+||+.||.+||++.++++
T Consensus 219 -------~~~~----~~~---~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 219 -------KIAK----SEP---PT--------LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred -------HHhh----cCC---CC--------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 000 00 0000112346789999999999999999999875
No 222
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-34 Score=328.37 Aligned_cols=274 Identities=20% Similarity=0.235 Sum_probs=200.0
Q ss_pred hccCCCCCceeeccceEEEEEEEC--CCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLG--ENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
..+|.+.+.||+|+||.||+|... ..++.||+|.+... +...+|++++++++||||+++++++ .....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAY-----RWKST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeE-----eeCCE
Confidence 357999999999999999999764 34678999987532 3456899999999999999999985 34578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++|||++. ++|.+++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 161 ~~lv~e~~~-~~l~~~l~~~------~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG 230 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDRS------GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFG 230 (392)
T ss_pred EEEEehhcC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCc
Confidence 999999997 7898888543 5789999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCC--ccHHHHHH
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDG--LTLHEFAK 933 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~--~~~~~~~~ 933 (1013)
+++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+.....
T Consensus 231 ~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~ 304 (392)
T PHA03207 231 AACKLDAHPD------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIR 304 (392)
T ss_pred cccccCcccc------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHH
Confidence 9976543211 111234679999999999999999999999999999999999999997643221 11111111
Q ss_pred hh------CChh-HHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 934 MA------LPEK-VMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 934 ~~------~~~~-~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.. ++.. ...+....-......|+.... +...........+.+++.+|+..||++|||+.|++..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 305 CMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTI---PPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HhccCccccCCccchhHHHHHHhhcccccCCccc---cchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 10 0100 001111111111111111100 0000001123457789999999999999999999864
No 223
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3e-34 Score=314.08 Aligned_cols=263 Identities=21% Similarity=0.308 Sum_probs=206.3
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.++|++.++||+|+||+||+|++..+++.||+|++..... ...+.+.+|+++++.++||||+++++++. .....
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~ 78 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFL-----NENNI 78 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEe-----cCCEE
Confidence 3578899999999999999999998899999999875432 33467899999999999999999999964 34789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+++++|.+++... +.+++..+..++.|++.|+.|||+.. +++||||||+||+++.++.++|+|||+
T Consensus 79 ~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl 150 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKKG------GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGV 150 (284)
T ss_pred EEEEecCCCCCHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCc
Confidence 9999999999999998764 46899999999999999999999732 899999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+...... ......|+..|+|||++.+..++.++|||||||++|++++|+.||........ ....
T Consensus 151 ~~~~~~~----------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~------~~~~ 214 (284)
T cd06620 151 SGELINS----------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDD------GQDD 214 (284)
T ss_pred ccchhhh----------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhh------hhhh
Confidence 8643211 12235689999999999888999999999999999999999999986432211 0011
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
+....+.+.......+.. .. ..+.+..+.+++.+|++.||++|||+.|+++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~---~~---------~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 215 PMGILDLLQQIVQEPPPR---LP---------SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hhHHHHHHHHHhhccCCC---CC---------chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 111222222222111100 00 012345688999999999999999999999864
No 224
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.7e-34 Score=315.44 Aligned_cols=254 Identities=20% Similarity=0.341 Sum_probs=202.0
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
.++|++.+.||+|+||.||+|.+..++..||+|++........+.+.+|++++++++||||+++++++. .+...+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF-----YENKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEe-----cCCeEE
Confidence 467999999999999999999998889999999998665555677899999999999999999999964 457889
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++.... ..+++.+++.++.|++.|+.|||+. +|+|+||||+||+++.++.++|+|||.+
T Consensus 79 lv~e~~~~~~L~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 79 ILIEFCDGGALDSIMLELE-----RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred EEeeccCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccc
Confidence 9999999999999987642 3689999999999999999999999 9999999999999999999999999988
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM-----GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
....... .......+++.|+|||++. ...++.++||||||+++|||++|+.||...... ...
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~----~~~- 217 (280)
T cd06611 151 AKNKSTL--------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM----RVL- 217 (280)
T ss_pred hhhcccc--------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH----HHH-
Confidence 7543211 1123456889999999874 345778999999999999999999999753211 000
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.. .....+ +. .......+..+.+++.+||+.+|.+||++.+|++.
T Consensus 218 --------~~----~~~~~~---~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 218 --------LK----ILKSEP---PT--------LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred --------HH----HhcCCC---CC--------cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 00 000000 00 00011223457889999999999999999999764
No 225
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=5.6e-34 Score=309.23 Aligned_cols=257 Identities=24% Similarity=0.369 Sum_probs=199.7
Q ss_pred hhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 694 LSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 694 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
++.+++.+.....||+|+||.||+|++..++..||+|.+........+.+.+|++++++++|+||+++++++. .+
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~ 77 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS-----EN 77 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeec-----cC
Confidence 4455666767789999999999999998889999999987655555677899999999999999999999964 44
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCC--CHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC-CCceE
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNF--NVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH-DMVAH 850 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l--~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~k 850 (1013)
+..++|+||+++++|.+++.... ..+ ++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+|
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~ 149 (268)
T cd06624 78 GFFKIFMEQVPGGSLSALLRSKW-----GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVK 149 (268)
T ss_pred CEEEEEEecCCCCCHHHHHHHhc-----ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEE
Confidence 78899999999999999997642 234 7788899999999999999999 9999999999999986 67999
Q ss_pred EccccccccCCCCCCCccccCCCCCcccccccccccccccCCCC--CCcccchHHHHHHHHHHHhCCCCCCCcCCCCccH
Q 001782 851 VGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGD--MSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTL 928 (1013)
Q Consensus 851 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~ 928 (1013)
|+|||.+........ ......++..|+|||++.+.. ++.++||||+|+++|+|++|+.||..........
T Consensus 150 l~dfg~~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~ 221 (268)
T cd06624 150 ISDFGTSKRLAGINP--------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM 221 (268)
T ss_pred EecchhheecccCCC--------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH
Confidence 999999875532111 122345789999999987654 7889999999999999999999986532111000
Q ss_pred HHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 929 HEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 929 ~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+. .......+ . ........+.+++.+||+.+|.+|||+.|+++
T Consensus 222 --~~------------~~~~~~~~------------~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 222 --FK------------VGMFKIHP------------E--IPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred --hh------------hhhhccCC------------C--CCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 00 00000000 0 00122345788999999999999999999986
No 226
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.3e-34 Score=321.45 Aligned_cols=281 Identities=17% Similarity=0.162 Sum_probs=197.5
Q ss_pred CCCceeec--cceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 703 SSNMIGQG--SFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 703 ~~~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
+.++||+| +|++||++++..+++.||+|+++.... ...+.+.+|+++++.++||||+++++++. .++..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-----~~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----ADNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-----ECCEEEE
Confidence 46789999 789999999999999999999975432 23356788999999999999999999964 4477899
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
||||+++++|.+++..... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.++++||+.+.
T Consensus 77 v~e~~~~~~l~~~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFM----DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred EEeccCCCcHHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhh
Confidence 9999999999999976432 3589999999999999999999999 99999999999999999999999998754
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCC--CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG--GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
.......... ..........++..|+|||++.+ ..++.++|||||||++|||++|+.||.......... .......
T Consensus 150 ~~~~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~ 227 (327)
T cd08227 150 SMINHGQRLR-VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKLNGTV 227 (327)
T ss_pred cccccccccc-ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH-HHhcCCc
Confidence 3321111000 00111223456788999999876 458899999999999999999999997643221111 1111111
Q ss_pred Chh-------HHHhhhh--------hhccch---hhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 001782 937 PEK-------VMEIVDP--------LLLLDL---EARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVV 998 (1013)
Q Consensus 937 ~~~-------~~~~i~~--------~l~~~~---~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 998 (1013)
+.. ..+.... ...... ..++... .....+........+.+++.+||+.||++|||++|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell 305 (327)
T cd08227 228 PCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNG--ESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLL 305 (327)
T ss_pred cccccccchhhhhcccCCcccCCcCCCCcccccCCcCcccc--CCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHh
Confidence 100 0000000 000000 0000000 0000111223456788999999999999999999998
Q ss_pred H
Q 001782 999 A 999 (1013)
Q Consensus 999 ~ 999 (1013)
+
T Consensus 306 ~ 306 (327)
T cd08227 306 N 306 (327)
T ss_pred c
Confidence 6
No 227
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.6e-34 Score=311.95 Aligned_cols=260 Identities=28% Similarity=0.466 Sum_probs=201.2
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCe---EEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEM---AVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
.+|++.+.||+|+||.||+|++..++. .||+|++.... ....+++..|+.+++.++||||+++++++ ....
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKSR 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEE-----CCCC
Confidence 468889999999999999999876553 69999986432 23356799999999999999999999985 3456
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..++||||+++++|.+++.... +.+++.+++.++.|++.|++|||++ |++||||||+||+++.++.+|++||
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~df 150 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQND-----GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF 150 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCC
Confidence 7899999999999999997642 3688999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~ 933 (1013)
|.+........... .........+..|+|||++.+..++.++||||+||++||+++ |..||......
T Consensus 151 g~~~~~~~~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--------- 218 (269)
T cd05065 151 GLSRFLEDDTSDPT---YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------- 218 (269)
T ss_pred ccccccccCccccc---cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---------
Confidence 99876543221110 000111112457999999999999999999999999999886 99998653211
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
+..+.+.... +.. ...+++..+.+++.+||+.+|.+||++.+|+..|+++
T Consensus 219 -----~~~~~i~~~~------~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 219 -----DVINAIEQDY------RLP----------PPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -----HHHHHHHcCC------cCC----------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0111111000 000 0112345678899999999999999999999998875
No 228
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.1e-34 Score=308.03 Aligned_cols=251 Identities=31% Similarity=0.475 Sum_probs=201.9
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
.++|++.+.||+|+||.||+|... ++.||+|.+..... ..+++.+|+.++++++|+||+++++++. .....+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVL-----QGNPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEc-----CCCCeE
Confidence 457899999999999999999885 67899999975543 4577899999999999999999999964 357789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++..... ..+++.++..++.|++.|+.|||++ +++||||||+||+++.++.+||+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~ 149 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGR----AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLA 149 (256)
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccc
Confidence 99999999999999986532 3689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+...... .....+..|+|||++.++.++.++||||||+++||+++ |..||...... .
T Consensus 150 ~~~~~~~-----------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~------ 207 (256)
T cd05039 150 KEASQGQ-----------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----D------ 207 (256)
T ss_pred ccccccc-----------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-----H------
Confidence 8552211 12234568999999998899999999999999999997 99998653111 0
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
..+.+.. ++ ++.. ....+..+.+++.+|+..+|++|||+.|++++|+.+
T Consensus 208 ---~~~~~~~----~~--~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 208 ---VVPHVEK----GY--RMEA----------PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ---HHHHHhc----CC--CCCC----------ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 1111100 00 0000 012245678999999999999999999999999763
No 229
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=6.7e-34 Score=307.04 Aligned_cols=254 Identities=28% Similarity=0.479 Sum_probs=199.2
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
.++|.+.+.||+|++|.||+|.+..+ ..||+|.+.... ...+.+.+|++++++++||+++++++++. ....+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~ 76 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS------EEPIY 76 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc------CCCcE
Confidence 35789999999999999999998754 459999876432 23467889999999999999999998852 24578
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||||+||++++++.+||+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~ 149 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDG----KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLA 149 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccc
Confidence 99999999999999976422 3578999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
........ .......++..|+|||+..+..++.++||||||+++|||++ |..||......
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------------ 210 (260)
T cd05069 150 RLIEDNEY-------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR------------ 210 (260)
T ss_pred eEccCCcc-------cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH------------
Confidence 76532211 01122345678999999988899999999999999999999 89998753211
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
...+.+.... ++. .....+..+.+++.+||+.||++||++++|++.|++
T Consensus 211 --~~~~~~~~~~------~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 211 --EVLEQVERGY------RMP----------CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --HHHHHHHcCC------CCC----------CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0001000000 000 001234568899999999999999999999999875
No 230
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.7e-34 Score=314.74 Aligned_cols=253 Identities=21% Similarity=0.295 Sum_probs=199.6
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
.+.|++.++||+|+||.||+|++..+++.||+|++........+.+.+|+++++.++||||+++++.+. .+...+
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 85 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY-----WDGKLW 85 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE-----eCCeEE
Confidence 357999999999999999999999889999999997665555677889999999999999999999864 346899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|..++.... ..+++.++..++.|++.|++|||++ +++||||||+||+++.++.+||+|||.+
T Consensus 86 lv~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~ 157 (292)
T cd06644 86 IMIEFCPGGAVDAIMLELD-----RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVS 157 (292)
T ss_pred EEEecCCCCcHHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccc
Confidence 9999999999998876542 3689999999999999999999999 9999999999999999999999999988
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM-----GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
...... ........++..|+|||++. ...++.++|||||||++|||++|+.||...... ..
T Consensus 158 ~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~-- 223 (292)
T cd06644 158 AKNVKT--------LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM----RV-- 223 (292)
T ss_pred eecccc--------ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH----HH--
Confidence 643211 11123345788999999975 345788999999999999999999998653110 00
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
...... ..+ + ...........+.+++.+||+.+|++||+++|+++
T Consensus 224 -------~~~~~~----~~~---~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 224 -------LLKIAK----SEP---P--------TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred -------HHHHhc----CCC---c--------cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000 000 0 00001122345788999999999999999999976
No 231
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.2e-34 Score=314.67 Aligned_cols=263 Identities=25% Similarity=0.423 Sum_probs=201.9
Q ss_pred hhccCCCCCceeeccceEEEEEEECC-----CCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGE-----NEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDF 770 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 770 (1013)
..++|++.+.||+|+||.||+|.+.. ++..||+|++..... ...+++.+|+.++++++||||+++++++.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~---- 78 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCA---- 78 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEc----
Confidence 35689999999999999999998743 567899999874432 23456889999999999999999999864
Q ss_pred cccceEEEEEeeccCCCHHHHhhccccc----------------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 001782 771 EEVDFKAIVYEYMECGSLEDWLHQSNDQ----------------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHG 834 (1013)
Q Consensus 771 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~ 834 (1013)
.+...++||||+++++|.+++...... .....+++.+++.++.|++.||+|||++ +++||
T Consensus 79 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~ 154 (288)
T cd05050 79 -VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHR 154 (288)
T ss_pred -CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceecc
Confidence 346789999999999999999754221 1113578899999999999999999999 99999
Q ss_pred CCCCCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-
Q 001782 835 DLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT- 913 (1013)
Q Consensus 835 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~- 913 (1013)
||||+||++++++.+||+|||.++.+....... .......+..|+|||.+.+..++.++|||||||++|||++
T Consensus 155 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~ 228 (288)
T cd05050 155 DLATRNCLVGENMVVKIADFGLSRNIYSADYYK------ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY 228 (288)
T ss_pred cccHhheEecCCCceEECccccceecccCcccc------ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhC
Confidence 999999999999999999999987543322111 1122234678999999998899999999999999999997
Q ss_pred CCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCC
Q 001782 914 RRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQ 993 (1013)
Q Consensus 914 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 993 (1013)
|..||...... +.. ..+.+... +.. ...++..+.+++.+|++.||.+|||
T Consensus 229 ~~~p~~~~~~~-----~~~--------~~~~~~~~-------~~~----------~~~~~~~l~~li~~~l~~~p~~Rpt 278 (288)
T cd05050 229 GMQPYYGMAHE-----EVI--------YYVRDGNV-------LSC----------PDNCPLELYNLMRLCWSKLPSDRPS 278 (288)
T ss_pred CCCCCCCCCHH-----HHH--------HHHhcCCC-------CCC----------CCCCCHHHHHHHHHHcccCcccCCC
Confidence 88888643111 100 00000000 000 0122456889999999999999999
Q ss_pred HHHHHHHHHH
Q 001782 994 MTDVVAKLCS 1003 (1013)
Q Consensus 994 ~~evl~~L~~ 1003 (1013)
+.|+++.|+.
T Consensus 279 ~~el~~~l~~ 288 (288)
T cd05050 279 FASINRILQR 288 (288)
T ss_pred HHHHHHHhhC
Confidence 9999999863
No 232
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.8e-34 Score=320.81 Aligned_cols=202 Identities=26% Similarity=0.356 Sum_probs=172.4
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec---cccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK---QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.+.||+|+||+||+|++..+++.||+|++... .....+.+.+|+.+++.++|++|+++++++ ..++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF-----QDENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE-----ecCCe
Confidence 4789999999999999999999989999999999742 222345688999999999999999999985 45578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++|+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECC
Confidence 999999999999999997632 3688999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCC-----CCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-----GDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
++..+..... .......||+.|+|||++.. ..++.++||||+||++|||++|+.||..
T Consensus 148 ~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 148 SCLRLLADGT-------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeecCCCCC-------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 9875432111 11223468999999999863 4578899999999999999999999965
No 233
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.5e-34 Score=308.23 Aligned_cols=256 Identities=27% Similarity=0.426 Sum_probs=193.3
Q ss_pred CceeeccceEEEEEEECC---CCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGE---NEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
+.||+|+||.||+|.+.. ....||+|.+.... ....+.+.+|+.+++.++||||+++++++. ..+...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICL----PSEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEee----cCCCCcEEEE
Confidence 468999999999998643 34679999875322 233467889999999999999999999864 2335678999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+.+++|.+++.... ...++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++.+
T Consensus 77 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 77 PYMKHGDLRNFIRSET-----HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred ecCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccc
Confidence 9999999999997642 2467788899999999999999999 9999999999999999999999999999755
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhC-CCCCCCcCCCCccHHHHHHhhCChh
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTR-RRPTDNMFNDGLTLHEFAKMALPEK 939 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G-~~pf~~~~~~~~~~~~~~~~~~~~~ 939 (1013)
....... ........++..|+|||++.+..++.++|||||||++|||++| .+||..... ..
T Consensus 149 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-----~~--------- 210 (262)
T cd05058 149 YDKEYYS----VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS-----FD--------- 210 (262)
T ss_pred cCCccee----ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH-----HH---------
Confidence 3221111 0111233457789999999888999999999999999999995 555543210 00
Q ss_pred HHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhh
Q 001782 940 VMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARK 1006 (1013)
Q Consensus 940 ~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1006 (1013)
.........+ +.. ....+..+.+++.+||+.+|++||++.||++.|+++..
T Consensus 211 ---~~~~~~~~~~---~~~----------~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 211 ---ITVYLLQGRR---LLQ----------PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ---HHHHHhcCCC---CCC----------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0000000000 000 01123468899999999999999999999999998764
No 234
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4e-34 Score=312.93 Aligned_cols=266 Identities=20% Similarity=0.291 Sum_probs=206.8
Q ss_pred cchhhhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcC-CCCccceEEEEeec
Q 001782 689 VSYADLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNI-RHRNLIKIITVCSS 767 (1013)
Q Consensus 689 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 767 (1013)
.++.++..+.+.|++.+.||+|+||.||+|++..+++.||+|++.... .....+..|+.+++++ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 355666677889999999999999999999999899999999986443 2345688899999998 69999999998753
Q ss_pred CCc-cccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC
Q 001782 768 IDF-EEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD 846 (1013)
Q Consensus 768 ~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 846 (1013)
... ......+++|||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++|+||||+||+++++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~ 157 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG----NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTEN 157 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 211 235678999999999999999976532 3578888999999999999999999 99999999999999999
Q ss_pred CceEEccccccccCCCCCCCccccCCCCCcccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 847 MVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM-----GGDMSATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 847 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
+.++|+|||++...... ........|+..|+|||++. +..++.++|||||||++|||++|..||...
T Consensus 158 ~~~~l~dfg~~~~~~~~--------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~ 229 (282)
T cd06636 158 AEVKLVDFGVSAQLDRT--------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDM 229 (282)
T ss_pred CCEEEeeCcchhhhhcc--------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCcccc
Confidence 99999999998754321 11123456889999999876 346788999999999999999999999653
Q ss_pred CCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 922 FNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
... ... ...... ..+ . ......+..+.+++.+||+.||.+||++.|+++
T Consensus 230 ~~~----~~~---------~~~~~~---~~~----~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 230 HPM----RAL---------FLIPRN---PPP----K---------LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred CHH----hhh---------hhHhhC---CCC----C---------CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 211 000 000000 000 0 000123456889999999999999999999975
No 235
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=3.7e-34 Score=309.09 Aligned_cols=255 Identities=26% Similarity=0.463 Sum_probs=201.4
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
..++|++.++||+|+||.||+|... +++.||+|.+.... ...+.+.+|+.++++++||||+++++++. .+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~ 75 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT------QEPI 75 (260)
T ss_pred chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc------cCCc
Confidence 3468999999999999999999876 56789999987433 33467899999999999999999998742 2468
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
+++|||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~ 148 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEG----IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGL 148 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcc
Confidence 999999999999999876432 4688999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhh
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
+........ .......++..|+|||++.+..++.++||||||+++||+++ |+.||......
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----------- 210 (260)
T cd05067 149 ARLIEDNEY-------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP----------- 210 (260)
T ss_pred eeecCCCCc-------ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-----------
Confidence 876542111 01123345678999999998899999999999999999999 99999753211
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
...+.+.... ++.. ....+..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 211 ---~~~~~~~~~~------~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 211 ---EVIQNLERGY------RMPR----------PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ---HHHHHHHcCC------CCCC----------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 0011010000 0000 01123468899999999999999999999999875
No 236
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=7.1e-34 Score=308.14 Aligned_cols=259 Identities=29% Similarity=0.475 Sum_probs=201.5
Q ss_pred hccCCCCCceeeccceEEEEEEECCC---CeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGEN---EMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
.++|++.+.||+|+||.||+|++..+ +..||+|.++... ....+.+.+|+.++++++||||+++++++. ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 77 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----KS 77 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cC
Confidence 35788999999999999999988533 3479999886432 223457899999999999999999999863 44
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
+..++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|
T Consensus 78 ~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~d 149 (267)
T cd05066 78 KPVMIVTEYMENGSLDAFLRKHD-----GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSD 149 (267)
T ss_pred CccEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCC
Confidence 67899999999999999997642 3579999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~ 932 (1013)
||.+..+....... .......++..|+|||++.+..++.++|||||||++||+++ |..||......+
T Consensus 150 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~------- 217 (267)
T cd05066 150 FGLSRVLEDDPEAA-----YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD------- 217 (267)
T ss_pred CCccccccccccee-----eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH-------
Confidence 99998664322111 01112233568999999998899999999999999999886 999986532110
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
....+.... ++.. ...++..+.+++.+|++.+|.+||++.++++.|+++
T Consensus 218 -------~~~~~~~~~------~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 218 -------VIKAIEEGY------RLPA----------PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -------HHHHHhCCC------cCCC----------CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 000000000 0000 012245678999999999999999999999999875
No 237
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.6e-34 Score=311.08 Aligned_cols=258 Identities=25% Similarity=0.396 Sum_probs=202.4
Q ss_pred hccCCCCCceeeccceEEEEEEECCC---CeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGEN---EMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
..+|.+.++||+|+||.||+|.+... ...||+|...... ....+.+.+|+.++++++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------ 78 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------ 78 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------
Confidence 45688899999999999999987543 4568999887544 2345678999999999999999999998642
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d 150 (270)
T cd05056 79 NPVWIVMELAPLGELRSYLQVNK-----YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGD 150 (270)
T ss_pred CCcEEEEEcCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEcc
Confidence 44689999999999999997642 3589999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~ 932 (1013)
||+++........ ......++..|+|||.+....++.++||||||+++||+++ |..||......+. ...
T Consensus 151 ~g~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~-~~~-- 220 (270)
T cd05056 151 FGLSRYLEDESYY-------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV-IGR-- 220 (270)
T ss_pred Cceeeecccccce-------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHH--
Confidence 9998765332110 0112234568999999988889999999999999999996 9999975422110 000
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhh
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARK 1006 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1006 (1013)
+.. . .++.. ...++..+.+++.+|+..+|++|||+.|+++.|+++.+
T Consensus 221 -----------~~~---~---~~~~~----------~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 221 -----------IEN---G---ERLPM----------PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred -----------HHc---C---CcCCC----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 000 0 00000 01234568889999999999999999999999999865
No 238
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.1e-34 Score=318.05 Aligned_cols=266 Identities=25% Similarity=0.388 Sum_probs=203.7
Q ss_pred hccCCCCCceeeccceEEEEEEECC-------CCeEEEEEEEeecc-ccchhHHHHHHHHHhcC-CCCccceEEEEeecC
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGE-------NEMAVAVKVMNLKQ-RGATKSFVAECEALRNI-RHRNLIKIITVCSSI 768 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 768 (1013)
..+|++.+.||+|+||.||+|++.. ....||+|++.... ....+++.+|+++++++ +||||+++++++.
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-- 88 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 88 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc--
Confidence 3579999999999999999998642 23468999887432 22346788999999999 7999999999964
Q ss_pred CccccceEEEEEeeccCCCHHHHhhccccc----------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCC
Q 001782 769 DFEEVDFKAIVYEYMECGSLEDWLHQSNDQ----------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKP 838 (1013)
Q Consensus 769 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp 838 (1013)
.....+++|||+++|+|.+++...... .....+++.++..++.|++.|++|||++ +++||||||
T Consensus 89 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp 162 (334)
T cd05100 89 ---QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAA 162 (334)
T ss_pred ---cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceecccccc
Confidence 346789999999999999999764321 1224588899999999999999999999 999999999
Q ss_pred CceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCC
Q 001782 839 SNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRP 917 (1013)
Q Consensus 839 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~p 917 (1013)
+||++++++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p 236 (334)
T cd05100 163 RNVLVTEDNVMKIADFGLARDVHNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP 236 (334)
T ss_pred ceEEEcCCCcEEECCcccceeccccccc------ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999765322111 01122334578999999999999999999999999999998 8888
Q ss_pred CCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHH
Q 001782 918 TDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDV 997 (1013)
Q Consensus 918 f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 997 (1013)
|..... ... ...+... ..... ...++..+.+++.+|++.+|.+||++.|+
T Consensus 237 ~~~~~~-----~~~---------~~~~~~~---~~~~~-------------~~~~~~~l~~li~~cl~~~p~~Rps~~el 286 (334)
T cd05100 237 YPGIPV-----EEL---------FKLLKEG---HRMDK-------------PANCTHELYMIMRECWHAVPSQRPTFKQL 286 (334)
T ss_pred CCCCCH-----HHH---------HHHHHcC---CCCCC-------------CCCCCHHHHHHHHHHcccChhhCcCHHHH
Confidence 865311 111 1111000 00000 01224568899999999999999999999
Q ss_pred HHHHHHhhhh
Q 001782 998 VAKLCSARKI 1007 (1013)
Q Consensus 998 l~~L~~~~~~ 1007 (1013)
++.|+.+...
T Consensus 287 l~~l~~~~~~ 296 (334)
T cd05100 287 VEDLDRVLTV 296 (334)
T ss_pred HHHHHHHhhh
Confidence 9999988743
No 239
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.1e-33 Score=308.71 Aligned_cols=260 Identities=22% Similarity=0.398 Sum_probs=203.2
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCe----EEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEM----AVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 772 (1013)
..+|++.+.||+|+||.||+|.+..++. .||+|....... .....+.+|+.++++++||||+++++++..
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 80 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS----- 80 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 3578899999999999999999865543 689998764432 234578899999999999999999999742
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
...++||||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+
T Consensus 81 -~~~~~v~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~ 151 (279)
T cd05057 81 -SQVQLITQLMPLGCLLDYVRNHK-----DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKIT 151 (279)
T ss_pred -CceEEEEecCCCCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEEC
Confidence 56889999999999999997653 3589999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHH
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEF 931 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~ 931 (1013)
|||.++......... ......++..|+|||.+....++.++||||||+++||+++ |+.||......
T Consensus 152 dfg~~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------- 218 (279)
T cd05057 152 DFGLAKLLDVDEKEY------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV------- 218 (279)
T ss_pred CCcccccccCcccce------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH-------
Confidence 999998664322111 1112224578999999988899999999999999999998 99998753111
Q ss_pred HHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 001782 932 AKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARKI 1007 (1013)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 1007 (1013)
+....+... .+...+ ..+...+.+++.+||..+|.+||++.++++.+.++.+.
T Consensus 219 -------~~~~~~~~~---~~~~~~-------------~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 219 -------EIPDLLEKG---ERLPQP-------------PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred -------HHHHHHhCC---CCCCCC-------------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 111111100 000000 01223567899999999999999999999999998654
No 240
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.5e-34 Score=312.75 Aligned_cols=275 Identities=21% Similarity=0.339 Sum_probs=197.9
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.++|++.+.||+|++|.||+|.+..+++.||+|.+..... .....+.+|++++++++||||+++++++. .....
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~ 78 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIH-----TKKTL 78 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEe-----cCCeE
Confidence 3689999999999999999999988899999999874432 22345778999999999999999999953 45789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||++ ++|.+++.... ..+++.++..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 79 ~lv~e~~~-~~L~~~~~~~~-----~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~ 149 (291)
T cd07844 79 TLVFEYLD-TDLKQYMDDCG-----GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGL 149 (291)
T ss_pred EEEEecCC-CCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECcccc
Confidence 99999998 59999887642 3678999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
++...... .......++..|+|||++.+ ..++.++||||+|+++|+|++|+.||.................
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~ 221 (291)
T cd07844 150 ARAKSVPS--------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVL 221 (291)
T ss_pred ccccCCCC--------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhc
Confidence 86432110 11122346789999999876 4588999999999999999999999975432111111111111
Q ss_pred CC---hhHHHhhhhhhccchhhhhccCCC--CchhHHHHHHH--HHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 936 LP---EKVMEIVDPLLLLDLEARASNCGS--HRTEIAKIEEC--LVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 936 ~~---~~~~~~i~~~l~~~~~~R~~~~~~--~~~~~~~~~~~--~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.. ........ .+..+...... ........... ...+.+++.+|++.+|++|||+.|+++
T Consensus 222 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 222 GTPTEETWPGVSS-----NPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred CCCChhhhhhhhh-----ccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00 00000000 00000000000 00000000011 145678999999999999999999875
No 241
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1e-33 Score=307.37 Aligned_cols=254 Identities=26% Similarity=0.406 Sum_probs=194.0
Q ss_pred CceeeccceEEEEEEECCCCe--EEEEEEEeecc-ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEM--AVAVKVMNLKQ-RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
+.||+|+||.||+|++.+++. .+|+|.++... ....+.+.+|+++++++ +||||+++++++. .....++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-----~~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HRGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe-----cCCCceEEE
Confidence 468999999999999977664 46888876322 23345788999999999 7999999999964 346789999
Q ss_pred eeccCCCHHHHhhccccc----------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceE
Q 001782 781 EYMECGSLEDWLHQSNDQ----------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAH 850 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 850 (1013)
||+++++|.+++...+.. .....+++.+++.++.|++.|++|||+. +++||||||+||++++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 999999999999765321 1123578999999999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHH
Q 001782 851 VGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLH 929 (1013)
Q Consensus 851 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~ 929 (1013)
++|||++...... ........+..|+|||++....++.++|||||||++|||++ |..||......
T Consensus 153 l~dfgl~~~~~~~---------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~----- 218 (270)
T cd05047 153 IADFGLSRGQEVY---------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----- 218 (270)
T ss_pred ECCCCCccccchh---------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----
Confidence 9999998632110 00111233567999999988899999999999999999997 99998653111
Q ss_pred HHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhh
Q 001782 930 EFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSAR 1005 (1013)
Q Consensus 930 ~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1005 (1013)
.. .+.+.... ++.. ...++..+.+++.+|++.+|.+|||+.|+++.|..+.
T Consensus 219 ~~---------~~~~~~~~------~~~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 219 EL---------YEKLPQGY------RLEK----------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HH---------HHHHhCCC------CCCC----------CCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 00 00000000 0000 0112345789999999999999999999999998875
No 242
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.5e-34 Score=322.34 Aligned_cols=192 Identities=22% Similarity=0.339 Sum_probs=164.7
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
..+|++.+.||+|+||.||+|++..++..||+|+... .....|+.++++++||||+++++++. .....+
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 133 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLV-----SGAITC 133 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEE-----eCCeeE
Confidence 4579999999999999999999998899999997532 22356999999999999999999864 446789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+. ++|.+++.... ..+++.+++.|+.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 134 lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 204 (357)
T PHA03209 134 MVLPHYS-SDLYTYLTKRS-----RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAA 204 (357)
T ss_pred EEEEccC-CcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccc
Confidence 9999997 78988886542 4689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPT 918 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf 918 (1013)
+.... ........||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 205 ~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 205 QFPVV---------APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccc---------CcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 74321 11123456899999999999999999999999999999999865554
No 243
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.2e-34 Score=308.00 Aligned_cols=251 Identities=22% Similarity=0.328 Sum_probs=202.6
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
.++|++.++||+|+||.||+|.+..++..||+|.+..... .+++.+|++++++++||||+++++++. .....+
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~ 74 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYF-----KNTDLW 74 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCcEE
Confidence 3689999999999999999999998889999999875433 578999999999999999999999864 447899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+++||+++++|.+++.... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.+||+|||.+
T Consensus 75 l~~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~ 146 (256)
T cd06612 75 IVMEYCGAGSVSDIMKITN-----KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVS 146 (256)
T ss_pred EEEecCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccc
Confidence 9999999999999997542 4689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
........ ......++..|+|||++.+..++.++||||||+++|+|++|+.||........ .
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~----~------ 208 (256)
T cd06612 147 GQLTDTMA--------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA----I------ 208 (256)
T ss_pred hhcccCcc--------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh----h------
Confidence 86543211 12234578899999999998999999999999999999999999875321100 0
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..+.... .............+.+++.+|++.||++|||+.||++
T Consensus 209 ----~~~~~~~--------------~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 209 ----FMIPNKP--------------PPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred ----hhhccCC--------------CCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 0000000 0000011123356788999999999999999999986
No 244
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.1e-34 Score=313.25 Aligned_cols=276 Identities=25% Similarity=0.390 Sum_probs=207.1
Q ss_pred ccCCCCCceeeccceEEEEEEEC----CCCeEEEEEEEeecccc-chhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLG----ENEMAVAVKVMNLKQRG-ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
.+|++.+.||+|+||.||+|+.. +++..||+|++...... ..+.+.+|+++++.++||||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CCC
Confidence 46788899999999999999864 34788999999755443 45679999999999999999999998743 235
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++||||+++++|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 152 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR-----DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISD 152 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc-----cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcc
Confidence 67899999999999999997653 2589999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||.+........... ......++..|+|||...+..++.++||||||+++|||++|+.|+......... +..
T Consensus 153 fg~~~~~~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~ 224 (284)
T cd05038 153 FGLAKVLPEDKDYYY-----VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIG 224 (284)
T ss_pred cccccccccCCccee-----ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---ccc
Confidence 999986643221110 111233556799999998889999999999999999999999998653221110 000
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhh
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSAR 1005 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1005 (1013)
..........+...+... .+.+ ....++.++.+++.+||+.+|++|||+.||+++|+.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~--~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 225 IAQGQMIVTRLLELLKEG--ERLP----------RPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred cccccccHHHHHHHHHcC--CcCC----------CCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 000000000000011000 0000 01233467889999999999999999999999998763
No 245
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1e-33 Score=305.19 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=200.2
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.+.||+|++|.||+|++..+++.||+|.+..... ...+.+.+|++++++++|||++++++.+. ......+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE----GEDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec----CCCCEEE
Confidence 48899999999999999999988899999999874332 33456889999999999999999998742 2335689
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
++|||+++++|.+++..... ..+++.+++.++.|++.|+++||+. +++||||||+||+++.++.++|+|||++
T Consensus 77 lv~e~~~~~~l~~~l~~~~~----~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQKG----KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred EEecccCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccce
Confidence 99999999999999986432 4689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
...... ........+++.|+|||+..+..++.++||||+||++|+|++|+.||..... ....
T Consensus 150 ~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~----- 211 (257)
T cd08223 150 RVLENQ--------CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLV----- 211 (257)
T ss_pred EEeccc--------CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHH-----
Confidence 755321 1112345688999999999999999999999999999999999999864211 1100
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.......+. .. ....+..+.+++.+|++.+|++||++.|+++.
T Consensus 212 ---~~~~~~~~~-~~----------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 212 ---YRIIEGKLP-PM----------------PKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ---HHHHhcCCC-CC----------------ccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 011110000 00 01223467899999999999999999999863
No 246
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=5.7e-34 Score=310.52 Aligned_cols=262 Identities=21% Similarity=0.306 Sum_probs=204.5
Q ss_pred hhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcC-CCCccceEEEEeecCCc-ccc
Q 001782 696 KATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNI-RHRNLIKIITVCSSIDF-EEV 773 (1013)
Q Consensus 696 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~-~~~ 773 (1013)
.+.++|++.+.||+|++|.||+|.+..+++.|++|++..... ..+.+.+|+++++++ +||||+++++++..... ...
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 457899999999999999999999988889999999875433 346789999999999 69999999999865432 345
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++||||+++++|.+++..... ....+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+|
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRK--KGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 678999999999999999876431 114789999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCC-----CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-----GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTL 928 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~ 928 (1013)
||.+....... .......|+..|+|||++.. ..++.++|||||||++|+|++|+.||......
T Consensus 157 ~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---- 224 (275)
T cd06608 157 FGVSAQLDSTL--------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM---- 224 (275)
T ss_pred Cccceecccch--------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH----
Confidence 99987543211 11234568899999998754 34678999999999999999999999643111
Q ss_pred HHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 929 HEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 929 ~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
... ..+.. .+.. ...........+.+++.+||..||++|||+.|+++
T Consensus 225 ~~~---------~~~~~-----~~~~----------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 225 RAL---------FKIPR-----NPPP----------TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HHH---------HHhhc-----cCCC----------CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 000 00000 0000 00011223456789999999999999999999986
No 247
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.3e-33 Score=306.04 Aligned_cols=254 Identities=21% Similarity=0.327 Sum_probs=195.7
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-----cchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-----GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
.+|+..+.||+|+||.||+|.+..++..||+|++..... ...+.+.+|+.++++++||||+++++++.. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD---RAE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc---CCC
Confidence 478999999999999999999988899999999864321 223468889999999999999999998642 234
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...+++|||+++++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAY------GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 6788999999999999999765 4578899999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||+++........ ........++..|+|||++.+..++.++||||+||++|||++|+.||...... ...
T Consensus 150 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~----~~~-- 218 (266)
T cd06651 150 FGASKRLQTICMS-----GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM----AAI-- 218 (266)
T ss_pred CCCcccccccccc-----CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH----HHH--
Confidence 9998755321110 11122345789999999999988999999999999999999999999753111 100
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
....... ..| ..+ ......+.+++ +||..+|++||+++||++
T Consensus 219 -------~~~~~~~--~~~------------~~~--~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 219 -------FKIATQP--TNP------------QLP--SHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred -------HHHhcCC--CCC------------CCc--hhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 0000000 000 000 11123445565 688899999999999975
No 248
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=6.5e-34 Score=307.45 Aligned_cols=256 Identities=28% Similarity=0.466 Sum_probs=202.1
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
..++|++.++||+|+||.||+|.+. +++.||+|.+.... ...+++.+|+.++++++||||+++++++. .....
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCS-----EEEPI 76 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeee-----cCCce
Confidence 4578999999999999999999986 45779999987433 33567899999999999999999999853 44678
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+++++|.+++..... ..+++.++..++.|++.|++|||++ +++|+||||+||++++++.+|++|||.
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~----~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~ 149 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEG----KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGL 149 (261)
T ss_pred EEEEeccCCCCHHHHHhcccc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECcccc
Confidence 999999999999999976532 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhh
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
+........ .......++..|+|||.+.+..++.++||||+|+++||+++ |+.||...... ...
T Consensus 150 ~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~------- 214 (261)
T cd05034 150 ARLIEDDEY-------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-EVL------- 214 (261)
T ss_pred ceeccchhh-------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHH-------
Confidence 876542110 01112234578999999998899999999999999999998 99998643111 000
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
..+....-...+ ...+..+.+++.+|++.+|++||+++|+.+.|+.
T Consensus 215 -----~~~~~~~~~~~~-----------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 215 -----EQVERGYRMPRP-----------------PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -----HHHHcCCCCCCC-----------------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 010000000000 1123467899999999999999999999998875
No 249
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-35 Score=288.52 Aligned_cols=258 Identities=23% Similarity=0.284 Sum_probs=207.1
Q ss_pred hhccCCCC-CceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccc
Q 001782 697 ATNDFSSS-NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 697 ~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 774 (1013)
.+++|++. ++||-|-.|.|..+..+.+++.+|+|++... ....+|++.--.. .|||||.+++++... +....
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs-~~~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENS-YQGRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhh-ccCce
Confidence 35567664 6899999999999999999999999998633 3456788764444 699999999998655 66778
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC---CCceEE
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH---DMVAHV 851 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl 851 (1013)
...+|||.|+||.|...++.+++ ..+++.++..|+.||+.|+.|||+. +|.||||||+|+|... +..+||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~----~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGD----QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred eeEeeeecccchHHHHHHHHccc----ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEe
Confidence 88999999999999999998865 5799999999999999999999999 9999999999999975 457999
Q ss_pred ccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHH
Q 001782 852 GDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEF 931 (1013)
Q Consensus 852 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~ 931 (1013)
+|||+|+.-. ........+-|+.|.|||++...+|+...|+||+||++|-|++|.+||......
T Consensus 206 tDfGFAK~t~---------~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~------- 269 (400)
T KOG0604|consen 206 TDFGFAKETQ---------EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL------- 269 (400)
T ss_pred cccccccccC---------CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc-------
Confidence 9999998432 123355677899999999999999999999999999999999999999764221
Q ss_pred HHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 932 AKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.+++..+.-|.. +...-.-+++....+...++++.+++.+|.+|-|+.|+++
T Consensus 270 ---aispgMk~rI~~-------------gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 270 ---AISPGMKRRIRT-------------GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred ---cCChhHHhHhhc-------------cCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 122222222221 1111223455666777889999999999999999999875
No 250
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=6.7e-34 Score=309.15 Aligned_cols=240 Identities=22% Similarity=0.341 Sum_probs=184.6
Q ss_pred ceeeccceEEEEEEECC------------------------CCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceE
Q 001782 706 MIGQGSFGFVYRGNLGE------------------------NEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKI 761 (1013)
Q Consensus 706 ~lg~G~~g~V~~~~~~~------------------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 761 (1013)
.||+|+||.||+|.... ....||+|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997521 124588998875544445678889999999999999999
Q ss_pred EEEeecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCce
Q 001782 762 ITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNV 841 (1013)
Q Consensus 762 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NI 841 (1013)
+++|.. ....++||||+++++|..++.... +.+++..+..++.|+++||+|||++ +|+||||||+||
T Consensus 82 ~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Ni 148 (274)
T cd05076 82 HGVCVR-----GSENIMVEEFVEHGPLDVCLRKEK-----GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNI 148 (274)
T ss_pred EEEEEe-----CCceEEEEecCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccE
Confidence 999753 367899999999999999987532 4688999999999999999999999 999999999999
Q ss_pred EecCCC-------ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHH-
Q 001782 842 LLDHDM-------VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMF- 912 (1013)
Q Consensus 842 ll~~~~-------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell- 912 (1013)
+++..+ .+|++|||.+..... .....++..|+|||.+.+ ..++.++|||||||++||++
T Consensus 149 ll~~~~~~~~~~~~~kl~d~g~~~~~~~------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~ 216 (274)
T cd05076 149 LLARLGLAEGTSPFIKLSDPGVSFTALS------------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICF 216 (274)
T ss_pred EEeccCcccCccceeeecCCcccccccc------------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 997643 489999998763321 112346788999998865 56899999999999999995
Q ss_pred hCCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 001782 913 TRRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI 992 (1013)
Q Consensus 913 ~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 992 (1013)
+|+.||....... .......... .| . .....+.+++.+||+.+|++||
T Consensus 217 ~g~~p~~~~~~~~--------------~~~~~~~~~~-~~-------~----------~~~~~~~~li~~cl~~~p~~Rp 264 (274)
T cd05076 217 DGEVPLKERTPSE--------------KERFYEKKHR-LP-------E----------PSCKELATLISQCLTYEPTQRP 264 (274)
T ss_pred CCCCCccccChHH--------------HHHHHHhccC-CC-------C----------CCChHHHHHHHHHcccChhhCc
Confidence 6999986532111 0111110000 00 0 0123478899999999999999
Q ss_pred CHHHHHHHHH
Q 001782 993 QMTDVVAKLC 1002 (1013)
Q Consensus 993 s~~evl~~L~ 1002 (1013)
|+.+|++.|+
T Consensus 265 s~~~il~~L~ 274 (274)
T cd05076 265 SFRTILRDLT 274 (274)
T ss_pred CHHHHHHhhC
Confidence 9999999873
No 251
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.4e-33 Score=312.37 Aligned_cols=204 Identities=23% Similarity=0.334 Sum_probs=163.5
Q ss_pred CCceeeccceEEEEEEECC--CCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEe
Q 001782 704 SNMIGQGSFGFVYRGNLGE--NEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 704 ~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
..+||+|+||+||+|+... ++..||+|.+.... ....+.+|++++++++||||+++++++.. ..+...++|||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLS---HSDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEec---cCCCeEEEEEe
Confidence 3689999999999999753 56789999886432 23567899999999999999999998753 24467899999
Q ss_pred eccCCCHHHHhhccccc---cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEe----cCCCceEEccc
Q 001782 782 YMECGSLEDWLHQSNDQ---LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLL----DHDMVAHVGDF 854 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DF 854 (1013)
|++ ++|.+++...... .....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 988 6888887543211 1123588999999999999999999999 99999999999999 56679999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
|+++....... .........||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 157 G~a~~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 157 GFARLFNSPLK-----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cceeccCCCcc-----cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 99986543211 11123345689999999998764 5789999999999999999999999753
No 252
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.4e-33 Score=305.02 Aligned_cols=254 Identities=32% Similarity=0.521 Sum_probs=201.0
Q ss_pred CceeeccceEEEEEEECCC---CeEEEEEEEeeccccc-hhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGEN---EMAVAVKVMNLKQRGA-TKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
++||+|+||.||+|.+... +..||+|++....... .+.+.+|++.++.++|+|++++++++. .....++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCT-----EEEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeec-----CCCceEEEE
Confidence 4799999999999999865 8899999997554332 577899999999999999999999964 357899999
Q ss_pred eeccCCCHHHHhhccccc---cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 781 EYMECGSLEDWLHQSNDQ---LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
||+++++|.+++...... .....+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+||+|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccc
Confidence 999999999999875210 0124689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
........ ........++..|+|||.+....++.++||||+|+++|||++ |..||..... ..
T Consensus 153 ~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~------ 215 (262)
T cd00192 153 RDVYDDDY------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-----EE------ 215 (262)
T ss_pred cccccccc------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-----HH------
Confidence 86643221 111334557889999999988899999999999999999999 6999876411 00
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
..+.+.. . .+.. ....++..+.+++.+|++.+|++|||+.|+++.|+
T Consensus 216 ---~~~~~~~---~---~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 216 ---VLEYLRK---G---YRLP----------KPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---HHHHHHc---C---CCCC----------CCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1111100 0 0000 01122456889999999999999999999998873
No 253
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.3e-33 Score=304.83 Aligned_cols=240 Identities=20% Similarity=0.375 Sum_probs=185.8
Q ss_pred CceeeccceEEEEEEECC------------CCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccc
Q 001782 705 NMIGQGSFGFVYRGNLGE------------NEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 772 (1013)
+.||+|+||.||+|+... ....|++|++..........+.+|+.+++.++||||+++++++. .
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~-----~ 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCV-----R 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEe-----c
Confidence 468999999999998642 23468999887655555567889999999999999999999964 3
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCc----
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMV---- 848 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---- 848 (1013)
....++||||+++++|..++.... ..+++.++++++.||+.|++|||++ +|+||||||+||+++.++.
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~ 147 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKS-----DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGEC 147 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCC
Confidence 356789999999999999887542 3589999999999999999999999 9999999999999987664
Q ss_pred ---eEEccccccccCCCCCCCccccCCCCCcccccccccccccccC-CCCCCcccchHHHHHHHHHHH-hCCCCCCCcCC
Q 001782 849 ---AHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM-GGDMSATGDVYSFGILLLEMF-TRRRPTDNMFN 923 (1013)
Q Consensus 849 ---~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DIwSlG~il~ell-~G~~pf~~~~~ 923 (1013)
+|++|||.+..... .....++..|+|||++. +..++.++|||||||++|||+ .|..||.....
T Consensus 148 ~~~~~l~d~g~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~ 215 (262)
T cd05077 148 GPFIKLSDPGIPITVLS------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL 215 (262)
T ss_pred CceeEeCCCCCCccccC------------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch
Confidence 89999999864321 12345788999999886 467899999999999999998 58888764211
Q ss_pred CCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 924 DGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
. . ........... . ......+.+++.+||+.||.+||++.+|++.+
T Consensus 216 ~-----~---------~~~~~~~~~~~-----------~-------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 216 A-----E---------KERFYEGQCML-----------V-------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred h-----H---------HHHHHhcCccC-----------C-------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0 0 00000000000 0 00124578899999999999999999999876
No 254
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1e-33 Score=305.21 Aligned_cols=251 Identities=28% Similarity=0.454 Sum_probs=197.4
Q ss_pred CceeeccceEEEEEEECC-CC--eEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGE-NE--MAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~-~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
++||+|++|.||+|.+.. .+ ..||+|.+..... ...+.+.+|+.++++++||||+++++++. . ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~-~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVL-----T-HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEc-----C-CeEEEEE
Confidence 468999999999999854 23 3699999975544 45677999999999999999999999853 2 6789999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++++|.+++..... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++.+
T Consensus 75 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~ 147 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRAL 147 (257)
T ss_pred EecCCCcHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccc
Confidence 99999999999987532 3689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCChh
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALPEK 939 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~~~ 939 (1013)
........ ......++..|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 148 ~~~~~~~~-----~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~------ 211 (257)
T cd05040 148 PQNEDHYV-----MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-----QILK------ 211 (257)
T ss_pred ccccccee-----cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH------
Confidence 43221111 1123456789999999998899999999999999999998 99998643111 0000
Q ss_pred HHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 940 VMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 940 ~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
. +.. .. .+.. .....+..+.+++.+|++.+|++||++.|+++.|.
T Consensus 212 --~-~~~----~~-~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 212 --K-IDK----EG-ERLE----------RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --H-HHh----cC-CcCC----------CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0 000 00 0000 00123456889999999999999999999999875
No 255
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1e-33 Score=307.21 Aligned_cols=257 Identities=22% Similarity=0.369 Sum_probs=187.6
Q ss_pred CceeeccceEEEEEEECC--CCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEe
Q 001782 705 NMIGQGSFGFVYRGNLGE--NEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
+.||+|+||.||+|.+.. ++..+|+|.++.... .....+.+|+.++++++||||+++++++. +....++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCT-----EVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----CCCCcEEEEE
Confidence 468999999999998643 456799998864432 23356888999999999999999999864 3466899999
Q ss_pred eccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCC
Q 001782 782 YMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLP 861 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 861 (1013)
|+++|+|.+++...... .....++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++...
T Consensus 76 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~ 151 (269)
T cd05087 76 FCPLGDLKGYLRSCRKA-ELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKY 151 (269)
T ss_pred CCCCCcHHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccccccc
Confidence 99999999999764321 113567778889999999999999999 99999999999999999999999999987432
Q ss_pred CCCCCccccCCCCCcccccccccccccccCCC-------CCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHH
Q 001782 862 PCSPATILETPSSSTGIKGTVGYVAPEYGMGG-------DMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~ 933 (1013)
.... ........++..|+|||++.+. .++.++||||||+++|||++ |+.||........ . ..
T Consensus 152 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-~-~~-- 221 (269)
T cd05087 152 KEDY------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV-L-TY-- 221 (269)
T ss_pred Ccce------eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH-H-HH--
Confidence 2111 0112234578899999987642 35789999999999999996 9999975322110 0 00
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
......... .+|.. .......+.+++..|+ .+|++|||++||++.|+
T Consensus 222 -~~~~~~~~~------~~~~~--------------~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 222 -TVREQQLKL------PKPRL--------------KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred -HhhcccCCC------CCCcc--------------CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 000000000 00000 0011234677888998 68999999999998874
No 256
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.1e-33 Score=302.61 Aligned_cols=251 Identities=22% Similarity=0.334 Sum_probs=202.6
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|+..+.||+|+||.||.++...+++.|++|.+.... ....+++.+|++++++++|+||+++++++. +....+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM-----DDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe-----cCCeEE
Confidence 5888999999999999999999999999999987442 334467889999999999999999999964 457899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
++|||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+
T Consensus 76 ~~~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQKG----QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred EEEEecCCCcHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcce
Confidence 99999999999999986532 4689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
........ ......+++.|+|||+..+..++.++||||||+++|||++|..||...... .
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-----~------- 208 (256)
T cd08221 149 KILGSEYS--------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-----N------- 208 (256)
T ss_pred EEcccccc--------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-----H-------
Confidence 76533221 123456889999999998888999999999999999999999998642110 0
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
....+.. ..+.. .....+..+.+++.+||+.+|.+||++.|+++.
T Consensus 209 -~~~~~~~----~~~~~-------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 209 -LVVKIVQ----GNYTP-------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred -HHHHHHc----CCCCC-------------CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 0111110 00000 001224557889999999999999999999875
No 257
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.1e-33 Score=312.48 Aligned_cols=260 Identities=25% Similarity=0.421 Sum_probs=201.3
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCe----EEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEM----AVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 772 (1013)
.++|+..+.||+|+||.||+|.+..++. .||+|++..... ....++.+|+.+++.++||||++++++|..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~----- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS----- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-----
Confidence 3578888999999999999999866654 578888764332 223468899999999999999999998742
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
...++++||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 81 -~~~~~v~e~~~~g~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~ 151 (303)
T cd05110 81 -PTIQLVTQLMPHGCLLDYVHEHK-----DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKIT 151 (303)
T ss_pred -CCceeeehhcCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEc
Confidence 23579999999999999987642 3578999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHH
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEF 931 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~ 931 (1013)
|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 152 Dfg~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~------- 218 (303)
T cd05110 152 DFGLARLLEGDEKE------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR------- 218 (303)
T ss_pred cccccccccCcccc------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-------
Confidence 99999865432111 11222345678999999998999999999999999999997 99998653110
Q ss_pred HHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 001782 932 AKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARKI 1007 (1013)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 1007 (1013)
...+++.... ++... ..++..+.+++.+||..+|++||+++|+++.++++.+.
T Consensus 219 -------~~~~~~~~~~------~~~~~----------~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 219 -------EIPDLLEKGE------RLPQP----------PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred -------HHHHHHHCCC------CCCCC----------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1111111100 00000 01234578899999999999999999999999988644
No 258
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.9e-33 Score=306.45 Aligned_cols=249 Identities=23% Similarity=0.336 Sum_probs=201.4
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
..|+..++||+|+||.||+|.+..++..||+|++.... ......+.+|+++++++.||||+++++++. +....+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KGTKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCEEE
Confidence 46888899999999999999998889999999987443 233467889999999999999999999964 457899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++... .+++.++..++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||++
T Consensus 79 lv~e~~~~~~L~~~i~~~-------~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~ 148 (277)
T cd06640 79 IIMEYLGGGSALDLLRAG-------PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred EEEecCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccc
Confidence 999999999999998653 578889999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
....... .......++..|+|||++.+..++.++|+|||||++|||++|..||........
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~----------- 209 (277)
T cd06640 149 GQLTDTQ--------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV----------- 209 (277)
T ss_pred eeccCCc--------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-----------
Confidence 7553221 112234578899999999988899999999999999999999999875321100
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
...+.. ..+ + . .....+..+.+++.+||+.+|++||++.+++..
T Consensus 210 ---~~~~~~---~~~---~--------~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 210 ---LFLIPK---NNP---P--------T--LTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ---hhhhhc---CCC---C--------C--CchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 000000 000 0 0 112345668899999999999999999999766
No 259
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=6.1e-34 Score=318.43 Aligned_cols=202 Identities=25% Similarity=0.349 Sum_probs=171.7
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.++||+|+||+||++++..+++.||+|++.... ......+.+|+.++..++|++|+++++++ .+...
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF-----QDENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecCCE
Confidence 47899999999999999999999899999999986321 22334578899999999999999999985 34578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecc
Confidence 999999999999999997642 3688999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM-----GGDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
++........ .......||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 148 ~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 148 SCLKLMEDGT-------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred hheecccCCc-------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 9875432111 1122356899999999986 34688899999999999999999999975
No 260
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.6e-34 Score=320.34 Aligned_cols=192 Identities=27% Similarity=0.365 Sum_probs=161.1
Q ss_pred eeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcC---CCCccceEEEEeecCCccccceEEEEE
Q 001782 707 IGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNI---RHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 707 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
||+|+||+||+|++..+++.||+|++..... ........|..++... +||+|+++++++ ......++||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEEEE
Confidence 6999999999999998999999999864321 2223455666776655 699999999985 4557899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++|+|.+++... +.+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~l~~~------~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 76 DYMSGGELFWHLQKE------GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred cCCCCChHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 999999999998764 5689999999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
... ........||..|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~ 199 (330)
T cd05586 147 LTD--------NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA 199 (330)
T ss_pred CCC--------CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence 211 1112345689999999998764 488999999999999999999999965
No 261
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.8e-34 Score=318.93 Aligned_cols=202 Identities=26% Similarity=0.362 Sum_probs=172.9
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.+.||+|+||+||++++..+++.||+|++.... ......+.+|+.++..++|++|+++++++ ...+.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~-----~~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF-----QDENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 47899999999999999999999999999999986422 22334578899999999999999999985 45578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~-----~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecc
Confidence 999999999999999997642 3688999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCC-----CCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-----GDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
++........ .......||+.|+|||++.+ +.++.++||||+||++|||++|+.||..
T Consensus 148 ~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 148 SCLKMNQDGT-------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeeccCCCc-------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 9976532211 11223568999999999876 4678899999999999999999999964
No 262
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=5e-34 Score=312.91 Aligned_cols=277 Identities=23% Similarity=0.324 Sum_probs=200.9
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
++|++.++||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+++++.++||||+++++++ ..+...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCCeE
Confidence 468899999999999999999988899999998763322 2345688999999999999999999985 455789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||++++++.++.... ..+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||+
T Consensus 76 ~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYP------NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred EEEEecCCccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeee
Confidence 9999999998888877643 3589999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH--
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK-- 933 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~-- 933 (1013)
+....... .......++..|+|||++.+ ..++.++||||||+++|||++|+.||...... ........
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~~~~~~~~~ 217 (286)
T cd07846 147 ARTLAAPG--------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI-DQLYHIIKCL 217 (286)
T ss_pred eeeccCCc--------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHHHh
Confidence 87543221 11223457899999999875 35788999999999999999999998643211 11111110
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
....+............+.. +.................+..+.+++.+||+.+|++||++.|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 218 GNLIPRHQEIFQKNPLFAGM-RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred CCCchhhHHHhccchHhhcc-ccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00111111111100000000 000000000011111234567899999999999999999999875
No 263
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.1e-33 Score=317.20 Aligned_cols=282 Identities=22% Similarity=0.278 Sum_probs=206.0
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.++|++.++||+|+||.||+|.+..+++.||+|++.... ......+.+|+.++++++||||+++++++....+......
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999999899999999986432 2234567889999999999999999998776555555678
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++|+||++ +++.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~lv~e~~~-~~l~~~~~~-------~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 84 YIVQELME-TDLYKLIKT-------QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred EEEehhcc-cCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccc
Confidence 99999998 688887754 3689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
+......... ........|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||...... .....+....
T Consensus 153 ~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~-~~~~~~~~~~ 226 (336)
T cd07849 153 ARIADPEHDH-----TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL-HQLNLILGVL 226 (336)
T ss_pred eeeccccccc-----cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHc
Confidence 9765432111 111234568899999998654 56889999999999999999999999653211 1111111100
Q ss_pred ---CChhHHHhhhhhhccchhhhhccCC-CCchhHH-HHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 936 ---LPEKVMEIVDPLLLLDLEARASNCG-SHRTEIA-KIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 936 ---~~~~~~~~i~~~l~~~~~~R~~~~~-~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.++....+.... ......... ....... ........+.+++.+||+.||++|||+.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 227 GTPSQEDLNCIISLR----ARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CCCCHHHHHHhhchh----hhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111121111111 000000000 0000001 111234568899999999999999999999875
No 264
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.7e-33 Score=305.00 Aligned_cols=255 Identities=22% Similarity=0.320 Sum_probs=197.9
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc------cchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR------GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
+|++.+.||+|+||+||+|... +++.+|+|.+..... ...+.+.+|++++++++|+||+++++++. +.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL-----DD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee-----cC
Confidence 5888999999999999999875 678899999874321 12345889999999999999999999964 34
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+||+|
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRF------GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEecc
Confidence 7899999999999999999765 4678999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||.+.......... ..........|+..|+|||++.+..++.++|||||||++|+|++|+.||....... ...
T Consensus 146 fg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~----~~~- 218 (265)
T cd06631 146 FGCARRLAWVGLHG--THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA----AMF- 218 (265)
T ss_pred chhhHhhhhccccc--cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH----HHH-
Confidence 99987653211110 11111234568999999999998889999999999999999999999997531110 000
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..... ....+ .. .......+.+++++||+.+|.+||++.|+++
T Consensus 219 --------~~~~~-~~~~~----~~----------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 219 --------YIGAH-RGLMP----RL----------PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred --------Hhhhc-cCCCC----CC----------CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 00000 00 0112345788999999999999999999875
No 265
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.5e-33 Score=307.01 Aligned_cols=249 Identities=24% Similarity=0.346 Sum_probs=201.0
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
++|++.+.||.|++|.||+|++..+++.||+|++.... ......+.+|+++++.++||||+++++++. ++...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL-----KGSKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE-----ECCeEE
Confidence 47889999999999999999999899999999987543 334467889999999999999999999854 447899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+|+||+++++|.+++... .+++.+++.++.|++.|+.|||++ +++||||+|+||++++++.++|+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred EEEEeeCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 999999999999998753 678999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
+...... .......++..|+|||++.+..++.++|||||||++|+|++|+.||...... .
T Consensus 146 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-----~------- 205 (274)
T cd06609 146 GQLTSTM--------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-----R------- 205 (274)
T ss_pred eeecccc--------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-----H-------
Confidence 8664321 1123456788999999999988999999999999999999999999653211 0
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
....+... .+ +.... ...+..+.+++.+|+..+|++|||++++++
T Consensus 206 --~~~~~~~~---~~---~~~~~---------~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 206 --VLFLIPKN---NP---PSLEG---------NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred --HHHHhhhc---CC---CCCcc---------cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 00000000 00 00000 002345788999999999999999999975
No 266
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.7e-34 Score=309.71 Aligned_cols=241 Identities=23% Similarity=0.396 Sum_probs=186.4
Q ss_pred CceeeccceEEEEEEECCCCe-------EEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEM-------AVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+.||+|+||.||+|.+...+. .||+|.+........+.+.+|+.+++.++||||+++++++. .+...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-----~~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCV-----CGDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEE-----eCCCcE
Confidence 469999999999998865433 48888886554444567889999999999999999999964 336688
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCc--------e
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMV--------A 849 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--------~ 849 (1013)
+||||+++|+|.+++.... ..+++..++.++.||+.|++|||++ +|+||||||+||+++.++. +
T Consensus 76 lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~ 147 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNK-----NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFI 147 (258)
T ss_pred EEEecCCCCcHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceE
Confidence 9999999999999998653 2578999999999999999999999 9999999999999987765 6
Q ss_pred EEccccccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCC-CCCCCcCCCCcc
Q 001782 850 HVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRR-RPTDNMFNDGLT 927 (1013)
Q Consensus 850 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~-~pf~~~~~~~~~ 927 (1013)
|++|||.+..... .....++..|+|||++.+. .++.++|||||||++|||++|. .||......
T Consensus 148 ~l~d~g~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--- 212 (258)
T cd05078 148 KLSDPGISITVLP------------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--- 212 (258)
T ss_pred EecccccccccCC------------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH---
Confidence 9999998864321 1224577899999998874 5789999999999999999985 555432110
Q ss_pred HHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 928 LHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 928 ~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
........ +..... ....++.+++.+||+.||++|||++++++.|+
T Consensus 213 -----------~~~~~~~~--------~~~~~~----------~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 213 -----------KKLQFYED--------RHQLPA----------PKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -----------HHHHHHHc--------cccCCC----------CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00000000 000000 11235789999999999999999999999863
No 267
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.8e-33 Score=302.99 Aligned_cols=251 Identities=22% Similarity=0.323 Sum_probs=201.1
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.++||+|+||.||++++..+++.||+|.+.... ....+++.+|++++++++||||+++++++ ...+..+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence 5888999999999999999999899999999987432 22345789999999999999999999985 4557899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++..... ..+++.++..++.|++.|++|||++ +++|+||+|+||+++.++.++++|||.+
T Consensus 76 lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQRG----VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred EEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 99999999999999876432 3578899999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
........ ......|++.|+|||+..+..++.++|||||||++|+|++|+.||.....
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-------------- 206 (256)
T cd08218 149 RVLNSTVE--------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM-------------- 206 (256)
T ss_pred eecCcchh--------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH--------------
Confidence 75532111 12234578899999999988999999999999999999999999864211
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.+.+.......... ........+.+++.+||+.+|.+||++.||++.
T Consensus 207 ---~~~~~~~~~~~~~~-------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 207 ---KNLVLKIIRGSYPP-------------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred ---HHHHHHHhcCCCCC-------------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 11111111110000 001234567899999999999999999999863
No 268
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.6e-33 Score=306.73 Aligned_cols=265 Identities=23% Similarity=0.381 Sum_probs=199.5
Q ss_pred CCCCCceeeccceEEEEEEEC---CCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCcc-ccc
Q 001782 701 FSSSNMIGQGSFGFVYRGNLG---ENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFE-EVD 774 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~ 774 (1013)
|++.++||+|+||.||+|.+. .+++.||+|++.... ....+++.+|++++++++||||+++++++...... ...
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 677889999999999999864 357889999987442 22345688999999999999999999987543111 112
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..++++||+.+|+|.+++...........+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 4578999999999998876432211223578899999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~ 933 (1013)
|.++........ .......++..|++||.+.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 158 g~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~~~~-- 227 (273)
T cd05074 158 GLSKKIYSGDYY------RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EIYNY-- 227 (273)
T ss_pred cccccccCCcce------ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HHHHH--
Confidence 999865322110 01122345678999999998899999999999999999999 88888653211 00000
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
+... .. ... ....+..+.+++.+|++.+|++|||+.|+++.|+++
T Consensus 228 ---------~~~~----~~---~~~----------~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 228 ---------LIKG----NR---LKQ----------PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred ---------HHcC----Cc---CCC----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000 00 000 011235688999999999999999999999999876
No 269
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=345.64 Aligned_cols=257 Identities=28% Similarity=0.378 Sum_probs=205.5
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
.+-+|+...+||.|.||.||-|.+..+|...|+|-++... ....+.+.+|+.++..++|||+|+++|+ ..+.+
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGV-----EvHRe 1307 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGV-----EVHRE 1307 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCce-----eecHH
Confidence 3457888899999999999999999999999999887433 3344668899999999999999999998 45667
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..+|.||||++|+|.+.++.. +-.++.....+..|++.|++|||++ |||||||||.||+++.+|.+|++||
T Consensus 1308 kv~IFMEyC~~GsLa~ll~~g------ri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DF 1378 (1509)
T KOG4645|consen 1308 KVYIFMEYCEGGSLASLLEHG------RIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDF 1378 (1509)
T ss_pred HHHHHHHHhccCcHHHHHHhc------chhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecc
Confidence 889999999999999999876 3356666777889999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCC---CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG---DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEF 931 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~ 931 (1013)
|.|..+.... ...+.......||+.|||||++.+. ....++||||+|||+.||+||+.||...++.-......
T Consensus 1379 Gsa~ki~~~~----~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V 1454 (1509)
T KOG4645|consen 1379 GSAVKIKNNA----QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHV 1454 (1509)
T ss_pred cceeEecCch----hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHH
Confidence 9998775431 1223445678899999999999875 35678999999999999999999998764432211111
Q ss_pred HHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 932 AKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.....|+ ++ +....+-.+++..|+..||++|.++.|+++.
T Consensus 1455 ~~gh~Pq---------------------------~P--~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1455 AAGHKPQ---------------------------IP--ERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred hccCCCC---------------------------Cc--hhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 1111111 11 1123445678889999999999999988764
No 270
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2e-33 Score=304.28 Aligned_cols=254 Identities=20% Similarity=0.283 Sum_probs=196.5
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-----cchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-----GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
.+|++.++||+|+||.||.|.+..++..||+|.+..... ...+.+.+|+.++++++||||+++++++... ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP---ME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC---CC
Confidence 478899999999999999999998999999998863321 1235688899999999999999999985421 23
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...+++|||+++++|.+++... ..+++..+.+++.|++.||+|||++ +++|+||||+||+++.++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSY------GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECc
Confidence 5678999999999999998765 3578889999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||.++....... .........|+..|+|||++.+..++.++|||||||++|||++|+.||...... ....
T Consensus 150 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~- 219 (265)
T cd06652 150 FGASKRLQTICL-----SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AAIF- 219 (265)
T ss_pred Cccccccccccc-----cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HHHH-
Confidence 999875532111 011123346889999999998888999999999999999999999998642111 1000
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+.. ..+ .++ .. .......+.+++.+|+. +|++||+++|+++
T Consensus 220 --------~~~-----~~~-~~~--------~~--~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 220 --------KIA-----TQP-TNP--------VL--PPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred --------HHh-----cCC-CCC--------CC--chhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 000 000 000 00 11223456778888884 9999999999975
No 271
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.4e-33 Score=304.44 Aligned_cols=255 Identities=26% Similarity=0.454 Sum_probs=200.1
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
..++|++.++||+|+||.||+|.+. .+..||+|.+... ....+.+.+|++++++++|+||+++++++. . ...
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~-~~~ 75 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-----K-EPI 75 (260)
T ss_pred cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEc-----C-CCe
Confidence 3568999999999999999999875 4556999988643 223467889999999999999999999853 2 567
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
+++|||+++++|.+++..... ..+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~ 148 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGL 148 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCc----cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcc
Confidence 999999999999999976432 4678889999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhh
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
+........ .......++..|+|||++..+.++.++|||||||++|++++ |+.||......
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~----------- 210 (260)
T cd05073 149 ARVIEDNEY-------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----------- 210 (260)
T ss_pred eeeccCCCc-------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH-----------
Confidence 875532111 01122345678999999998899999999999999999998 99998653111
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
...+.+...... . .....+..+.+++.+|++.+|++||++.++.+.|+.
T Consensus 211 ---~~~~~~~~~~~~---~-------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 211 ---EVIRALERGYRM---P-------------RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---HHHHHHhCCCCC---C-------------CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 001111100000 0 001224568899999999999999999999999875
No 272
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.3e-33 Score=314.34 Aligned_cols=260 Identities=24% Similarity=0.315 Sum_probs=202.3
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc---chhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG---ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.+.||+|+||+||+|.+..+++.||+|.+...... ..+.+..|+++++.++||||+++++.+ .....
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASF-----QTETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeee-----ecCCE
Confidence 3688899999999999999999988999999999754322 345688999999999999999999985 34578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+.+++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPG----KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCC----CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecc
Confidence 8999999999999999875432 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccc---------------------cCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhC
Q 001782 856 LARFLPPCSPATIL---------------------ETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTR 914 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~---------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G 914 (1013)
++............ ..........|+..|+|||++.+..++.++||||||+++|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 98765432211100 000112245688999999999998999999999999999999999
Q ss_pred CCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCC-
Q 001782 915 RRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQ- 993 (1013)
Q Consensus 915 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs- 993 (1013)
+.||...... . ...++... ++ .. +.....+..+.+++.+|+..||++|||
T Consensus 229 ~~pf~~~~~~-~------------~~~~~~~~----~~----~~--------~~~~~~~~~~~~li~~~l~~~p~~R~s~ 279 (316)
T cd05574 229 TTPFKGSNRD-E------------TFSNILKK----EV----TF--------PGSPPVSSSARDLIRKLLVKDPSKRLGS 279 (316)
T ss_pred CCCCCCCchH-H------------HHHHHhcC----Cc----cC--------CCccccCHHHHHHHHHHccCCHhHCCCc
Confidence 9999753211 0 01111110 00 00 000113456889999999999999999
Q ss_pred ---HHHHHH
Q 001782 994 ---MTDVVA 999 (1013)
Q Consensus 994 ---~~evl~ 999 (1013)
++|++.
T Consensus 280 ~~~~~~ll~ 288 (316)
T cd05574 280 KRGAAEIKQ 288 (316)
T ss_pred hhhHHHHHc
Confidence 666665
No 273
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-35 Score=284.52 Aligned_cols=253 Identities=21% Similarity=0.260 Sum_probs=197.3
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec-cccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccce
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK-QRGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
.++.+...-||.|.-|+||+++.+.++...|||.+... ..++.+++...++++..- .+|+||+.+|++. .+..
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi-----~n~d 165 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI-----TNTD 165 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe-----eCch
Confidence 34556678899999999999999999999999999744 334456777788876665 4899999999964 4466
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
+++.||.|. .-.+.+++..+ +++++.-+-++...+..||.||.+++ +|+|||+||+|||+|+.|++|+||||
T Consensus 166 V~IcMelMs-~C~ekLlkrik-----~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFG 237 (391)
T KOG0983|consen 166 VFICMELMS-TCAEKLLKRIK-----GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFG 237 (391)
T ss_pred HHHHHHHHH-HHHHHHHHHhc-----CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeeccc
Confidence 789999987 56677776553 46888888999999999999999986 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCC---CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG---DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
++.++-+. .......|.+.|||||.+.-. .|+.++||||||++++|+.||+.||..-..+-..+..+
T Consensus 238 IsGrlvdS---------kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkv- 307 (391)
T KOG0983|consen 238 ISGRLVDS---------KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKV- 307 (391)
T ss_pred ccceeecc---------cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHH-
Confidence 99866432 224456689999999998754 68889999999999999999999998743332222222
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+...|. . ++.-......+.+++..|++.|+.+||...++++
T Consensus 308 ---------------ln~ePP---~--------L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 308 ---------------LNEEPP---L--------LPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred ---------------HhcCCC---C--------CCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 221110 0 0000113456788899999999999999999875
No 274
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.9e-33 Score=308.99 Aligned_cols=278 Identities=23% Similarity=0.339 Sum_probs=198.2
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++++|++.+.||+|+||.||+|.+..++..||+|++..... .....+.+|+++++.++|+||+++++++. .+..
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-----~~~~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIH-----TKET 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEe-----cCCe
Confidence 45789999999999999999999988899999999875432 22346788999999999999999999853 4468
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+. +++.+++.... ..+++.++..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg 148 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQHP-----GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFG 148 (291)
T ss_pred EEEEEeccc-CCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccc
Confidence 899999997 78877765432 3577888999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
+++...... .......++..|+|||++.+. .++.++|||||||++|||++|..||.........+......
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~ 220 (291)
T cd07870 149 LARAKSIPS--------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTV 220 (291)
T ss_pred cccccCCCC--------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Confidence 987532211 112234568899999998764 57889999999999999999999997643221111111110
Q ss_pred h-CChh-HHHhhhhhhccchhhhhccCCCCchhHHHH---HHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 A-LPEK-VMEIVDPLLLLDLEARASNCGSHRTEIAKI---EECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~-~~~~-~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~---~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
. .+.. ....+...-...+. ....+. ....... ......+.+++.+|+..||++|||+.|++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 221 LGVPTEDTWPGVSKLPNYKPE-WFLPCK--PQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cCCCChhhhhhhhhcccccch-hccccC--CcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0 0100 00000000000000 000000 0000000 011356788999999999999999999874
No 275
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=318.29 Aligned_cols=288 Identities=24% Similarity=0.263 Sum_probs=208.2
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCC-ccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSID-FEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~~~~ 777 (1013)
.|...+.||+|+||.||+|+++.+|+.||||.++... ....++..+|++++++++|||||+++++-.... .--.....
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 4566789999999999999999999999999998543 344577899999999999999999999732211 01135678
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEec--CCC--ceEEcc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLD--HDM--VAHVGD 853 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~--~~kl~D 853 (1013)
+|||||.+|||+..+++.... .++++.+.+.+..+++.||.|||++ |||||||||.||++- ++| ..||+|
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~---~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENA---YGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred EEEeecCCCcHHHHhcCcccc---cCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeec
Confidence 999999999999999876443 6899999999999999999999999 999999999999994 333 689999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccC-CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM-GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
||.|+.++++. .....+||..|.+||... .+.|+..+|.|||||++||.+||..||..............
T Consensus 168 fG~Arel~d~s---------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~ 238 (732)
T KOG4250|consen 168 FGAARELDDNS---------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMW 238 (732)
T ss_pred ccccccCCCCC---------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhh
Confidence 99999775433 366789999999999998 48889999999999999999999999987533321111111
Q ss_pred Hh--hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC--CHHHHHHHHHHhhh
Q 001782 933 KM--ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI--QMTDVVAKLCSARK 1006 (1013)
Q Consensus 933 ~~--~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP--s~~evl~~L~~~~~ 1006 (1013)
.. ..+..+.-...+.. -+| ..+.......-.........+..++..++..+|++|. ...+....+..|..
T Consensus 239 ~~~tkkp~~v~i~~~~~e-Ngp---v~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 239 HIITKKPSGVAIGAQEEE-NGP---VEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred hhhccCCCceeEeeeccc-CCc---eeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 11 11111111000000 001 0011111111111122334456677778888889988 77777777777654
No 276
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3e-33 Score=306.72 Aligned_cols=275 Identities=21% Similarity=0.290 Sum_probs=202.0
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.+.||+|+||.||+|++..++..||+|++.... ....+.+.+|+.++++++||||+++++++. .+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP-----HGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCeeE
Confidence 5888999999999999999998889999999987544 233467899999999999999999999954 457889
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+ +++|.+++.... ..+++.+++.++.||+.|++|||+. +++|+||||+||+++.++.++|+|||.+
T Consensus 76 ~v~e~~-~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEE-----RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred EEeccc-CCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 999999 899999987643 4689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
........ .......++..|+|||++.+. .++.++||||+||++|||++|.+||...... ...........
T Consensus 147 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~ 218 (286)
T cd07832 147 RLFSEEEP-------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFRTLG 218 (286)
T ss_pred ccccCCCC-------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHHHcC
Confidence 86543211 112345688999999998654 4688999999999999999998887653211 11111111100
Q ss_pred Ch---hHHHhhhhhhccchhhhhccCCCCchhH-HHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 937 PE---KVMEIVDPLLLLDLEARASNCGSHRTEI-AKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 937 ~~---~~~~~i~~~l~~~~~~R~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.. ...+.. .+ .+. ............. ....+....+.+++.+|++.+|.+|||++++++.
T Consensus 219 ~~~~~~~~~~~-~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 219 TPNEETWPGLT-SL--PDY-NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CCChHHHhhcc-Cc--chh-hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 000000 00 000 0000000000000 0112234678899999999999999999999863
No 277
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.6e-33 Score=301.76 Aligned_cols=253 Identities=28% Similarity=0.498 Sum_probs=197.6
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
..+|++.+.||+|+||.||+|.+. .+..+|+|++.... .....+.+|++++++++||+++++++++. .....+
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCT-----ERSPIC 75 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEc-----cCCceE
Confidence 357888899999999999999886 46679999886332 23467899999999999999999999853 446789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 147 (256)
T cd05112 76 LVFEFMEHGCLSDYLRAQR-----GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMT 147 (256)
T ss_pred EEEEcCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcce
Confidence 9999999999999987642 3578999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+....... .......++..|+|||+..++.++.++||||||+++|||++ |..||...... ...
T Consensus 148 ~~~~~~~~-------~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~~~---- 211 (256)
T cd05112 148 RFVLDDQY-------TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS-----EVV---- 211 (256)
T ss_pred eecccCcc-------cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH-----HHH----
Confidence 75432110 01122335678999999998899999999999999999998 99998653211 100
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
+.+...... .++. ..+..+.+++.+||+.+|++|||+.|++++|.
T Consensus 212 -----~~~~~~~~~---~~~~-------------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 212 -----ETINAGFRL---YKPR-------------LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred -----HHHhCCCCC---CCCC-------------CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 000000000 0000 11346888999999999999999999999873
No 278
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.3e-33 Score=307.56 Aligned_cols=255 Identities=19% Similarity=0.280 Sum_probs=198.2
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
++|++.+.||+|+||.||+|++..++..||+|.+.... ......+.+|++++++++||||+++++.+. ..+..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFF-----IEGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhee-----cCCeEE
Confidence 47889999999999999999999899999999887432 223457889999999999999999999853 457899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++..... ...+++..+..++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||.+
T Consensus 76 lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVA---TEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred EEEeecCCCCHHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 99999999999999876421 146899999999999999999999632 8999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCC------CCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHH
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGD------MSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEF 931 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~ 931 (1013)
..+... ......++..|+|||++.+.. ++.++||||+||++|+|++|+.||.......
T Consensus 151 ~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~------ 214 (286)
T cd06622 151 GNLVAS----------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN------ 214 (286)
T ss_pred ccccCC----------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh------
Confidence 754221 122345788999999986543 4789999999999999999999996531110
Q ss_pred HHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 932 AKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
....+.......+... .......+.+++.+|++.+|++||++.+++..
T Consensus 215 --------~~~~~~~~~~~~~~~~-------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 215 --------IFAQLSAIVDGDPPTL-------------PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred --------HHHHHHHHhhcCCCCC-------------CcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 0000011111111000 01234567889999999999999999999873
No 279
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2e-33 Score=317.31 Aligned_cols=282 Identities=22% Similarity=0.244 Sum_probs=205.7
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec--cccchhHHHHHHHHHhcCCCCccceEEEEeecCC-cccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK--QRGATKSFVAECEALRNIRHRNLIKIITVCSSID-FEEV 773 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 773 (1013)
..++|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|+.++++++||||+++++++.... ..+.
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 357899999999999999999999989999999998632 2223456778999999999999999999875321 2334
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++||||+. ++|.+++.. .++..++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~--------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~D 161 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM--------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 161 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 56899999998 688887753 378889999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||.++...... ......++..|+|||++.+..++.++||||+||++|+|++|+.||...... ..+.....
T Consensus 162 fg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~ 231 (353)
T cd07850 162 FGLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIE 231 (353)
T ss_pred CccceeCCCCC---------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHH
Confidence 99998653211 123346788999999999999999999999999999999999999753211 11111111
Q ss_pred hh--CChhHHHhhhhhhccchhhhhccCCCCchh----------HH-HHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 934 MA--LPEKVMEIVDPLLLLDLEARASNCGSHRTE----------IA-KIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 934 ~~--~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~----------~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.. .+++..+.+..........|+......... .. .....+..+.+++.+|++.||++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 232 QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11 111222222222211112222111000000 00 011234567899999999999999999999864
No 280
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.3e-33 Score=306.64 Aligned_cols=255 Identities=30% Similarity=0.465 Sum_probs=195.8
Q ss_pred CceeeccceEEEEEEECCCC------eEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 705 NMIGQGSFGFVYRGNLGENE------MAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+.||+|+||.||+|++.... +.||+|.+.... ......+.+|+.+++.++||||+++++++. .....+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL-----LNEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec-----CCCCeE
Confidence 46899999999999985433 679999876432 234567889999999999999999999864 346789
Q ss_pred EEEeeccCCCHHHHhhcccccc-ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC-----ceEE
Q 001782 778 IVYEYMECGSLEDWLHQSNDQL-EVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM-----VAHV 851 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kl 851 (1013)
+||||+++++|.+++....... ....+++.+++.++.|++.|++|||+. +++|+||||+||+++.++ .+|+
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEE
Confidence 9999999999999997643221 224578999999999999999999999 999999999999999877 8999
Q ss_pred ccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHH
Q 001782 852 GDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHE 930 (1013)
Q Consensus 852 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~ 930 (1013)
+|||+++........ .......++..|+|||++.++.++.++|||||||++|||++ |+.||...... .
T Consensus 153 ~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~-----~ 221 (269)
T cd05044 153 GDFGLARDIYKSDYY------RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ-----E 221 (269)
T ss_pred CCccccccccccccc------ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH-----H
Confidence 999998755322111 11123345788999999999999999999999999999998 99998643110 0
Q ss_pred HHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 931 FAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 931 ~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
....+.. ..++. .....+..+.+++.+||..+|.+||++.+|++.|++
T Consensus 222 ---------~~~~~~~------~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 222 ---------VLQHVTA------GGRLQ----------KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ---------HHHHHhc------CCccC----------CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0000000 00000 011234567899999999999999999999998863
No 281
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2e-33 Score=302.20 Aligned_cols=247 Identities=32% Similarity=0.472 Sum_probs=196.3
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
++|++.+.||+|+||.||++.. +++.||+|+..... ..+.+.+|+.++++++|||++++++++.. +..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------~~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH------NGLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC------CCcEE
Confidence 5789999999999999999975 56789999986432 34678899999999999999999998632 34689
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
||||+++++|.+++..... ..+++.+++.++.|++.|+.|||+. |++||||||+||+++.++.+||+|||.+.
T Consensus 76 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~ 148 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGR----ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLAR 148 (254)
T ss_pred EEECCCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccce
Confidence 9999999999999976532 3578999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCC
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
..... ......+..|+|||++.++.++.++|||||||++|||++ |+.||...... .
T Consensus 149 ~~~~~-----------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~------- 205 (254)
T cd05083 149 VGSMG-----------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-----E------- 205 (254)
T ss_pred ecccc-----------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-----H-------
Confidence 43211 112234578999999998899999999999999999997 99998653211 1
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
..+.+.+....++ ....+..+.+++.+||+.+|++||+++++++.|+.
T Consensus 206 --~~~~~~~~~~~~~----------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 206 --VKECVEKGYRMEP----------------PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred --HHHHHhCCCCCCC----------------CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 1111111100000 01234567899999999999999999999998863
No 282
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=8.3e-34 Score=311.36 Aligned_cols=251 Identities=23% Similarity=0.314 Sum_probs=198.7
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
+.|.....||+|+||.||++.+..++..||||.+........+.+.+|+.+++.++||||+++++.+. .++..++
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~l 96 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL-----VGDELWV 96 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhee-----cCCeEEE
Confidence 44555678999999999999998889999999987555555567899999999999999999999853 4578899
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
||||+++++|.+++.. +.+++.++..++.||+.|++|||++ +|+||||||+||++++++.+||+|||++.
T Consensus 97 v~e~~~~~~L~~~~~~-------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~ 166 (292)
T cd06658 97 VMEFLEGGALTDIVTH-------TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCA 166 (292)
T ss_pred EEeCCCCCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchh
Confidence 9999999999998854 3578899999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCCh
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPE 938 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~ 938 (1013)
...... .......|+..|+|||+..+..++.++||||||+++|||++|+.||...... ...
T Consensus 167 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~~------- 227 (292)
T cd06658 167 QVSKEV--------PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL----QAM------- 227 (292)
T ss_pred hccccc--------ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHH-------
Confidence 543211 1123356889999999998888999999999999999999999998642110 000
Q ss_pred hHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 939 KVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 939 ~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.. +........ .........+.+++.+|+..||.+|||++|+++.
T Consensus 228 --~~-~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 228 --RR-IRDNLPPRV--------------KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred --HH-HHhcCCCcc--------------ccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00 000000000 0001123457788999999999999999999874
No 283
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=8.7e-34 Score=309.29 Aligned_cols=249 Identities=21% Similarity=0.317 Sum_probs=199.1
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+.|+..+.||+|+||.||+|.+..++..||+|.+.... ....+.+.+|++++++++||||+++++++ ......+
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 78 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY-----LKGTKLW 78 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccc-----ccCCceE
Confidence 35667789999999999999998889999999987433 23345788999999999999999999985 3457899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++.. ..+++..+..++.|++.|+.|||++ +++|+||+|+||++++++.+|++|||++
T Consensus 79 lv~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~ 148 (277)
T cd06642 79 IIMEYLGGGSALDLLKP-------GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred EEEEccCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEcccccc
Confidence 99999999999999864 3678899999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
..+.... .......++..|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~----------- 209 (277)
T cd06642 149 GQLTDTQ--------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV----------- 209 (277)
T ss_pred ccccCcc--------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-----------
Confidence 7553211 112234578899999999998999999999999999999999999865321100
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
...+... .++.. ....+..+.+++.+|++.+|.+||++.||++.
T Consensus 210 ---~~~~~~~------~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 210 ---LFLIPKN------SPPTL----------EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ---HhhhhcC------CCCCC----------CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0000000 00000 01234567899999999999999999999973
No 284
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.7e-33 Score=305.70 Aligned_cols=257 Identities=21% Similarity=0.312 Sum_probs=185.4
Q ss_pred CceeeccceEEEEEEECC--CCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEe
Q 001782 705 NMIGQGSFGFVYRGNLGE--NEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
+.||+|+||.||+|.... ....+|+|.+..... .....+.+|+++++.++||||+++++.+. .....++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~-----~~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI-----ESIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEEC-----CCCceEEEEE
Confidence 368999999999997532 345788887754332 23456789999999999999999999864 4467899999
Q ss_pred eccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCC
Q 001782 782 YMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLP 861 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 861 (1013)
|+++|+|.+++....... ....++..+..++.||+.|++|||++ +|+||||||+||++++++.+||+|||++....
T Consensus 76 ~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 151 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMV-AQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQY 151 (269)
T ss_pred eCCCCcHHHHHHhccccc-cccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccc
Confidence 999999999998754211 12456788899999999999999999 99999999999999999999999999987543
Q ss_pred CCCCCccccCCCCCcccccccccccccccCC-------CCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHH
Q 001782 862 PCSPATILETPSSSTGIKGTVGYVAPEYGMG-------GDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~ 933 (1013)
..... .......++..|+|||+... ..++.++|||||||++|||++ |..||......+ ....
T Consensus 152 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~--- 221 (269)
T cd05042 152 PEDYY------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQ--- 221 (269)
T ss_pred cchhe------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHH---
Confidence 21110 01123345778999998643 356889999999999999999 788886532110 0000
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
.+.. .....+. +. .....+..+.+++..|| .||++|||++||++.|+
T Consensus 222 ---------~~~~----~~~~~~~------~~--~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 222 ---------VVRE----QDIKLPK------PQ--LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ---------Hhhc----cCccCCC------Cc--ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 0000 0000000 00 00122345667788888 59999999999999874
No 285
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.1e-33 Score=304.82 Aligned_cols=256 Identities=21% Similarity=0.334 Sum_probs=200.2
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc------cchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR------GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
+|+..+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++ .+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT-----CED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee-----ccC
Confidence 47888999999999999999988999999999874331 1245788999999999999999999995 455
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC-ceEEc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM-VAHVG 852 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~ 852 (1013)
+..++||||+++++|.+++... +.+++..+..++.|++.|++|||++ +++|+||+|+||+++.++ .+||+
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKY------GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEc
Confidence 7889999999999999999765 4688999999999999999999999 999999999999998776 69999
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
|||.+..+..... ..........++..|+|||++.+..++.++||||+|+++|+|++|..||........ .....
T Consensus 147 dfg~~~~~~~~~~----~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~ 221 (268)
T cd06630 147 DFGAAARLAAKGT----GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-LALIF 221 (268)
T ss_pred ccccccccccccc----cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-HHHHH
Confidence 9999986643211 111112345688999999999888899999999999999999999999964321110 00000
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+..... ..+ . ........+.+++.+|++.+|++||++.|++.
T Consensus 222 ---------~~~~~~--~~~------------~--~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 222 ---------KIASAT--TAP------------S--IPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ---------HHhccC--CCC------------C--CchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 000000 000 0 00123456788999999999999999999975
No 286
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.9e-33 Score=308.80 Aligned_cols=276 Identities=21% Similarity=0.247 Sum_probs=199.8
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc-----chhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG-----ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
+|++.+.||+|+||.||+|.+..+++.||+|.+...... ....+..|++++++++|+||+++++++. +..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFG-----HKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheee-----cCC
Confidence 478889999999999999999888999999999754322 2345678999999999999999999964 357
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..++||||+ +++|.+++.... ..+++.+++.++.||++||+|||++ +++||||||+||+++.++.+||+||
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKS-----IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccc
Confidence 889999999 799999997652 2689999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
|+++...... .......++..|+|||.+.+ ..++.++|||||||++|||++|..||...... ........
T Consensus 147 g~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~ 217 (298)
T cd07841 147 GLARSFGSPN--------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFE 217 (298)
T ss_pred eeeeeccCCC--------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHH
Confidence 9998654321 11223356788999998865 46788999999999999999998777653211 11111111
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.........+.. .... +..+....................+.+++.+||+.||++|||++||++.
T Consensus 218 ~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 218 ALGTPTEENWPG-VTSL-PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred HcCCCchhhhhh-cccc-cccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 100000000000 0000 0000000000000011112335678899999999999999999999873
No 287
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=288.24 Aligned_cols=203 Identities=24% Similarity=0.360 Sum_probs=174.8
Q ss_pred CCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCC-CCccceEEEEeecCCccccceEEEEEee
Q 001782 704 SNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIR-HRNLIKIITVCSSIDFEEVDFKAIVYEY 782 (1013)
Q Consensus 704 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e~ 782 (1013)
.+.||+|+|+.|--+....++..||||++.........++.+|++++...+ |+||++++++ |+++...|+|||-
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLief-----FEdd~~FYLVfEK 157 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEF-----FEDDTRFYLVFEK 157 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHH-----hcccceEEEEEec
Confidence 368999999999999999999999999998776677788999999999994 9999999999 6778999999999
Q ss_pred ccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC---ceEEcccccccc
Q 001782 783 MECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM---VAHVGDFGLARF 859 (1013)
Q Consensus 783 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DFG~a~~ 859 (1013)
|.||+|...|.++ ..+++.++.++..+|+.||.|||.+ ||.|||+||+|||-.... -+|||||.++.-
T Consensus 158 m~GGplLshI~~~------~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 158 MRGGPLLSHIQKR------KHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSG 228 (463)
T ss_pred ccCchHHHHHHHh------hhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccc
Confidence 9999999999887 5799999999999999999999999 999999999999997654 589999988764
Q ss_pred CCCCCCCccccCCCCCcccccccccccccccCC-----CCCCcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 860 LPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-----GDMSATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
+.....-.. .........+|+..|||||+..- ..|+.++|.||||||+|-|+.|.+||...
T Consensus 229 ~k~~~~~sp-astP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~ 294 (463)
T KOG0607|consen 229 IKLNNDCSP-ASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGH 294 (463)
T ss_pred cccCCCCCC-CCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCc
Confidence 433222221 22334556789999999997532 35888999999999999999999999864
No 288
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=343.08 Aligned_cols=465 Identities=26% Similarity=0.328 Sum_probs=394.8
Q ss_pred eeeeccCCccccCCcccCCcccceEEeccCCccccCCCCccccCCCCceeccccccccCCCCCccccccccccceecccc
Q 001782 104 FINFANNGFSGEIPGEIGRLFRLETLILANNSFSGKIPSNLSRCSNLINFHARGNNLVGQIPPDIGYSWLKLEFLSLRDN 183 (1013)
Q Consensus 104 ~L~l~~n~l~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~L~~n 183 (1013)
.+|+++.++. .||..+-.-..++.|+++.|.+-...-+.+.+.-+|+.||+++|.+. ..|..+. .+.+|+.|.++.|
T Consensus 2 ~vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it-~l~~L~~ln~s~n 78 (1081)
T KOG0618|consen 2 HVDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQIT-LLSHLRQLNLSRN 78 (1081)
T ss_pred CcccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhh-hHHHHhhcccchh
Confidence 3677788888 89988877777999999999987322344455667999999999997 8888775 7889999999999
Q ss_pred cccccCCCCccCCCCcceeeecccccCCCCCCccccccccceeecccccccCCCcchhccCCccceeeccCCccCCCCCC
Q 001782 184 LLAGQLAPSIGNISNLQVLSIGENRLSGRLPDSLGQLRSLYYLSISENAFSGMFPSSIFNISSLESISLLGNRLEGSLPV 263 (1013)
Q Consensus 184 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 263 (1013)
.|. ..|.+.+++.+|++|.|.+|++. ..|.++..+++|++|++|.|++. .+|..+..++.++.+..++|.....++.
T Consensus 79 ~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~ 155 (1081)
T KOG0618|consen 79 YIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQ 155 (1081)
T ss_pred hHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhcc
Confidence 998 67789999999999999999998 89999999999999999999998 8999999999999999999933323332
Q ss_pred CcCCCCCCCcEEEeeeccccccCCCCCCCCCCCceEEcccCcccccccccccCCCCccccccccCcCCCCCCCChhhhhh
Q 001782 264 NIGFSLPNLENLSVRQNNYTGSLPHSLSNASNLRLLDFSLNHFSGQVKIDFNRLPNLFRLSFSKNNLGTGAIGDLDFIAH 343 (1013)
Q Consensus 264 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 343 (1013)
..++.++|..|.+.+.++..+.+++. .|||+.|.+. ...+..+.+|+.|....|++......
T Consensus 156 ------~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~~~------- 217 (1081)
T KOG0618|consen 156 ------TSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELEIS------- 217 (1081)
T ss_pred ------ccchhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEEec-------
Confidence 23888999999999999998888877 8999999987 34577889999999999998764432
Q ss_pred cccccccccccccccccCCccchhhhcchhhHHHHhccchhHHhhcccccceeecccccccCCcccccCCCCCCCEEEcc
Q 001782 344 LTNCSKLEALGLDTNIFGGVLPLSIANLSSTIILFSMGLNQIYVKNLVNLNGFGLEYNQLTGPIPHAIGELRNLQVLDLH 423 (1013)
Q Consensus 344 l~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 423 (1013)
-++|+.|..+.|.+....+. ....+|++++++.|+++ .+|+|++.+.+|+.|+..
T Consensus 218 ---g~~l~~L~a~~n~l~~~~~~---------------------p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n 272 (1081)
T KOG0618|consen 218 ---GPSLTALYADHNPLTTLDVH---------------------PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNAN 272 (1081)
T ss_pred ---CcchheeeeccCcceeeccc---------------------cccccceeeecchhhhh-cchHHHHhcccceEeccc
Confidence 35788888888877632211 12357999999999999 566999999999999999
Q ss_pred CCccCccCCccccccCccCEEEcCCCcccCCCCcccccCcccceeecccccccccCCchhhcccch-hhhhccCCCeecc
Q 001782 424 HNNLDGHIPESLGNLTILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTL-SILLDLSGNLLTG 502 (1013)
Q Consensus 424 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~-l~~L~Ls~N~l~~ 502 (1013)
+|+|+ .+|..+...++|+.|.+..|.+. -+|.....++.|+.|+|..|+|. .+|+.++..+.. +..|+.+.|++..
T Consensus 273 ~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~ 349 (1081)
T KOG0618|consen 273 HNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLST 349 (1081)
T ss_pred chhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccc
Confidence 99997 88999999999999999999999 78888888999999999999998 888877765555 8889999999984
Q ss_pred cCCccccCcCCCcEEEccCCCCCCCCccccccccccccccccccccccccCccccccCCCCeEecccccccccccccccc
Q 001782 503 SIPAEVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRNNLSGQIPEFLEN 582 (1013)
Q Consensus 503 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 582 (1013)
...-.=.....|+.|++.+|+|++..-+.+.+.++|+.|+|++|+|.......+.++..|++|+||+|+|+ .+|..+.+
T Consensus 350 lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~ 428 (1081)
T KOG0618|consen 350 LPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVAN 428 (1081)
T ss_pred cccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHh
Confidence 33222234678999999999999988888999999999999999999544456899999999999999999 79999999
Q ss_pred ccccceeecCCccCCCCCCCCCccCCCcceeeeCCcCCCC
Q 001782 583 LSFLEYLNLSYNHLEGEVPRRGVFSNKTRFYFTGNKRLCG 622 (1013)
Q Consensus 583 l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~ 622 (1013)
+..|++|...+|++...+ +..+++.+..+.++.|...-.
T Consensus 429 ~~~L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~~~ 467 (1081)
T KOG0618|consen 429 LGRLHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNNLSEV 467 (1081)
T ss_pred hhhhHHHhhcCCceeech-hhhhcCcceEEecccchhhhh
Confidence 999999999999999765 778889999999998875433
No 289
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.2e-33 Score=307.82 Aligned_cols=260 Identities=22% Similarity=0.389 Sum_probs=200.6
Q ss_pred ccCCCCCceeeccceEEEEEEECC-----CCeEEEEEEEeecccc-chhHHHHHHHHHhcCCCCccceEEEEeecCCccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGE-----NEMAVAVKVMNLKQRG-ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 772 (1013)
++|++.+.||+|+||.||+|+... +.+.|++|.+...... ..+.+.+|++++++++||||+++++++. +
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~ 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCR-----E 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEEC-----C
Confidence 578899999999999999999753 3467999988644333 3467899999999999999999999864 3
Q ss_pred cceEEEEEeeccCCCHHHHhhcccccc---ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCce
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQL---EVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVA 849 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~---~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 849 (1013)
....++||||+++++|.+++....... ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 156 (275)
T cd05046 80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREV 156 (275)
T ss_pred CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcE
Confidence 467899999999999999998654211 012589999999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccH
Q 001782 850 HVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTL 928 (1013)
Q Consensus 850 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~ 928 (1013)
+++|||+++...... ........++..|+|||.+.+..++.++||||||+++|+|++ |..||....... .
T Consensus 157 ~l~~~~~~~~~~~~~-------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--~ 227 (275)
T cd05046 157 KVSLLSLSKDVYNSE-------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--V 227 (275)
T ss_pred EEcccccccccCccc-------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--H
Confidence 999999986432111 111223456788999999988889999999999999999998 888886432110 0
Q ss_pred HHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 929 HEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 929 ~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
... ........ .....++..+.+++.+||+.+|.+||++.|+++.|+
T Consensus 228 ~~~-----------~~~~~~~~----------------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 228 LNR-----------LQAGKLEL----------------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHH-----------HHcCCcCC----------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 000 00000000 000123456889999999999999999999999885
No 290
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.8e-33 Score=307.52 Aligned_cols=269 Identities=20% Similarity=0.261 Sum_probs=191.5
Q ss_pred hccCCCCCceeeccceEEEEEEECCC---CeEEEEEEEeeccccch-----------hHHHHHHHHHhcCCCCccceEEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGEN---EMAVAVKVMNLKQRGAT-----------KSFVAECEALRNIRHRNLIKIIT 763 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~~~~ 763 (1013)
.++|++.++||+|+||.||+|.+..+ +..+|+|+......... .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 36899999999999999999999776 66777776543322111 11223334456678999999999
Q ss_pred EeecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEe
Q 001782 764 VCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLL 843 (1013)
Q Consensus 764 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll 843 (1013)
++... .......++++|++. .++.+.+... ...++..+..|+.|++.|++|||+. +|+||||||+||++
T Consensus 91 ~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill 159 (294)
T PHA02882 91 CGSFK-RCRMYYRFILLEKLV-ENTKEIFKRI------KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMV 159 (294)
T ss_pred eeeEe-cCCceEEEEEEehhc-cCHHHHHHhh------ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 76432 112235578888876 5677766543 2357788999999999999999999 99999999999999
Q ss_pred cCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCC
Q 001782 844 DHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFN 923 (1013)
Q Consensus 844 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~ 923 (1013)
+.++.+||+|||+|+.+........ ..........||+.|+|||+..+..++.++|||||||++|||++|+.||.....
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~-~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~ 238 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIE-YSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGH 238 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccc-cccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcccc
Confidence 9999999999999986643221110 011112335699999999999999999999999999999999999999986422
Q ss_pred CCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 924 DGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
......... .+++.+..... .....++..+.+++..|++.+|++||+++++.+.+
T Consensus 239 ~~~~~~~~~--------~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 239 NGNLIHAAK--------CDFIKRLHEGK---------------IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred chHHHHHhH--------HHHHHHhhhhh---------------hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 211111100 01111110000 01122356688999999999999999999999875
No 291
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.9e-33 Score=303.05 Aligned_cols=255 Identities=22% Similarity=0.306 Sum_probs=202.1
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.+.||.|+||.||+|.+..+++.||+|++.... ....+++..|++++++++||||+++++++.. ..+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 5888899999999999999999899999999987432 2234568889999999999999999997642 2346789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHh-----hcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLH-----HHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH-----~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
++|||+++++|.+++..... ....+++.+++.++.|++.|++||| +. +++|+||+|+||+++.++.+||+
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~ 152 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKK--ERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLG 152 (265)
T ss_pred EEehhccCCCHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEe
Confidence 99999999999999976422 1247899999999999999999999 77 99999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
|||++........ ......+++.|+|||++.+..++.++||||||+++|+|++|+.||..... ....
T Consensus 153 d~g~~~~~~~~~~--------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~ 219 (265)
T cd08217 153 DFGLAKILGHDSS--------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ-----LQLA 219 (265)
T ss_pred cccccccccCCcc--------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH-----HHHH
Confidence 9999986543211 12234688999999999998899999999999999999999999975321 1110
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
+.+... .+.. .....+..+.+++.+|++.+|++||++.||++.
T Consensus 220 ---------~~~~~~---~~~~-------------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 220 ---------SKIKEG---KFRR-------------IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ---------HHHhcC---CCCC-------------CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 111100 0000 001224567899999999999999999999863
No 292
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.9e-33 Score=301.94 Aligned_cols=255 Identities=27% Similarity=0.388 Sum_probs=201.0
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc--chhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG--ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.+.||+|+||.||+|.+..+++.||+|+++..... ..+.+.+|++++++++|+||+++++++ ...+..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVE-----VHREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeE-----ecCCEEE
Confidence 588899999999999999999888999999999755442 456789999999999999999999985 3457889
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+|+||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.+
T Consensus 76 lv~e~~~~~~L~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 76 IFMEYCSGGTLEELLEHG------RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred EEEecCCCCcHHHHHhhc------CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 999999999999999764 3578889999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCC---CCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGD---MSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
........... .......++..|+|||++.+.. ++.++||||||+++||+++|+.||....... ......
T Consensus 147 ~~~~~~~~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~---~~~~~~ 219 (264)
T cd06626 147 VKLKNNTTTMG----EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF---QIMFHV 219 (264)
T ss_pred cccCCCCCccc----ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH---HHHHHH
Confidence 86643322110 0012346788999999988766 8899999999999999999999997532110 000000
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
. ... ++ ..+........+.+++.+||+.+|.+||++.|++.
T Consensus 220 ~------------~~~----~~--------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 220 G------------AGH----KP--------PIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred h------------cCC----CC--------CCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 000 00 00011122445678999999999999999999874
No 293
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.7e-33 Score=306.66 Aligned_cols=275 Identities=23% Similarity=0.332 Sum_probs=199.2
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|+..+.||+|++|.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++ .+.+..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhc-----ccCCcEE
Confidence 47889999999999999999998999999999874432 2235688999999999999999999985 4557899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+. ++|.+++..... ..+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||++
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASPL----SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred EEeeccc-cCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccch
Confidence 9999997 689998876432 4689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCC-CCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh-
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGD-MSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA- 935 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~- 935 (1013)
........ ......++..|+|||++.+.. ++.++|||||||++|||++|+.||....... .........
T Consensus 148 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~ 218 (284)
T cd07860 148 RAFGVPVR--------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLG 218 (284)
T ss_pred hhcccCcc--------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhC
Confidence 75532111 122334678999999877654 6889999999999999999999997532111 111111111
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHH-HHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAK-IEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.+.. . +.+.....+..+............. .......+.+++.+|++.||++|||++|+++
T Consensus 219 ~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 219 TPDE--V-VWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred CCCh--h-hhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 1100 0 0000000011111100000111111 1122345788999999999999999999985
No 294
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.8e-33 Score=300.57 Aligned_cols=249 Identities=29% Similarity=0.439 Sum_probs=195.3
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecccc-chhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeec
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG-ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYM 783 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 783 (1013)
++||+|+||.||+|.+.. ++.||+|.+...... ..+.+.+|++++++++||||+++++++. .....++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV-----QKQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cCCCeEEEEEcC
Confidence 479999999999999986 889999988754333 4467899999999999999999999864 446789999999
Q ss_pred cCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCC
Q 001782 784 ECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPC 863 (1013)
Q Consensus 784 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 863 (1013)
++++|.+++.... ..+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||.+......
T Consensus 75 ~~~~l~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (251)
T cd05041 75 PGGSLLTFLRKKK-----NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGG 146 (251)
T ss_pred CCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCC
Confidence 9999999997642 3578899999999999999999999 9999999999999999999999999998754321
Q ss_pred CCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCChhHHH
Q 001782 864 SPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALPEKVME 942 (1013)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1013)
.. ........++..|+|||++.++.++.++|||||||++|||++ |..||...... ...+
T Consensus 147 ~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--------------~~~~ 206 (251)
T cd05041 147 IY------TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--------------QTRE 206 (251)
T ss_pred cc------eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--------------HHHH
Confidence 10 000112234567999999998899999999999999999999 88888653211 0111
Q ss_pred hhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 943 IVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 943 ~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
.+.... ++.. ....+..+.+++.+|+..+|++|||+.|+++.|++
T Consensus 207 ~~~~~~------~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 207 RIESGY------RMPA----------PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred HHhcCC------CCCC----------CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 111000 0000 01234568899999999999999999999998863
No 295
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.3e-33 Score=301.43 Aligned_cols=248 Identities=25% Similarity=0.345 Sum_probs=198.2
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-----cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-----GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
+|+..+.||+|+||.||+|.+..++..|++|.+..... ...+.+.+|+++++.++||||+++++++. .+.
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER-----EED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe-----cCC
Confidence 57888999999999999999988899999999875432 23457889999999999999999999853 447
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..+++|||+++++|.+++... ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.+||+||
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKY------GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 889999999999999999765 4578999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCC-CCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGD-MSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
|.+....... ......++..|+|||.+.... ++.++|+|||||++|+|++|+.||...... ....
T Consensus 147 ~~~~~~~~~~---------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~----~~~~- 212 (258)
T cd06632 147 GMAKQVVEFS---------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV----AAVF- 212 (258)
T ss_pred ccceeccccc---------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH----HHHH-
Confidence 9987543211 123456889999999987776 899999999999999999999999753211 0000
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.... .. .++.. .......+.+++.+||+.+|.+||++.+++.
T Consensus 213 --------~~~~---~~---~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 213 --------KIGR---SK---ELPPI----------PDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred --------HHHh---cc---cCCCc----------CCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0000 00 00000 0112345678999999999999999999975
No 296
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.6e-33 Score=309.37 Aligned_cols=252 Identities=23% Similarity=0.301 Sum_probs=202.8
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
.++|.+.+.||+|+||.||+|.+..++..||+|.+........+.+.+|+.+++.++||||+++++++. ..+..+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~ 92 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL-----VGDELW 92 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheee-----eCCcEE
Confidence 478999999999999999999998888999999987555555577899999999999999999999864 346789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+|+||+++++|.+++... .+++.++..++.|++.|++|||++ +++||||||+||+++.++.+||+|||++
T Consensus 93 lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~ 162 (293)
T cd06647 93 VVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (293)
T ss_pred EEEecCCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcce
Confidence 999999999999999753 578889999999999999999999 9999999999999999999999999988
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
....+... ......+++.|+|||.+.+..++.++||||||+++|++++|+.||............
T Consensus 163 ~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~------- 227 (293)
T cd06647 163 AQITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI------- 227 (293)
T ss_pred eccccccc--------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh-------
Confidence 75533211 123346888999999998888999999999999999999999999753221100000
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
. ..+ .+. .......+..+.+++.+||+.+|.+||++.+++..
T Consensus 228 ----------~-~~~--~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 228 ----------A-TNG--TPE--------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ----------h-cCC--CCC--------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000 000 00111223457889999999999999999999865
No 297
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.8e-33 Score=304.50 Aligned_cols=255 Identities=24% Similarity=0.349 Sum_probs=197.3
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc----------chhHHHHHHHHHhcCCCCccceEEEEeecCC
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG----------ATKSFVAECEALRNIRHRNLIKIITVCSSID 769 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 769 (1013)
+|.+.+.||+|+||.||+|....+++.||+|.++..... ..+.+.+|+.+++.++|||++++++++.
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--- 78 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET--- 78 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec---
Confidence 578889999999999999999888999999988632110 1245788999999999999999999863
Q ss_pred ccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCce
Q 001782 770 FEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVA 849 (1013)
Q Consensus 770 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 849 (1013)
..+..++||||+++++|.++++.. +.+++..+..++.|++.|+.|||++ +++||||+|+||+++.++.+
T Consensus 79 --~~~~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~ 147 (272)
T cd06629 79 --TEEYLSIFLEYVPGGSIGSCLRTY------GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGIC 147 (272)
T ss_pred --cCCceEEEEecCCCCcHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeE
Confidence 447889999999999999999765 4688999999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCC--CCcccchHHHHHHHHHHHhCCCCCCCcCCCCcc
Q 001782 850 HVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGD--MSATGDVYSFGILLLEMFTRRRPTDNMFNDGLT 927 (1013)
Q Consensus 850 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~ 927 (1013)
|++|||.++....... ........|+..|+|||++.... ++.++|+||||+++||+++|..||......
T Consensus 148 ~l~d~~~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--- 218 (272)
T cd06629 148 KISDFGISKKSDDIYD------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI--- 218 (272)
T ss_pred EEeecccccccccccc------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH---
Confidence 9999999875432111 11123456889999999987654 788999999999999999999998642111
Q ss_pred HHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 928 LHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 928 ~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.... +..... .++..... ...+.+..+.+++.+|++.+|++||+++||++
T Consensus 219 -~~~~---------~~~~~~------~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 219 -AAMF---------KLGNKR------SAPPIPPD------VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred -HHHH---------Hhhccc------cCCcCCcc------ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 1100 000000 00000000 00123456888999999999999999999986
No 298
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.1e-33 Score=301.21 Aligned_cols=249 Identities=24% Similarity=0.423 Sum_probs=199.0
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|+..+.||+|+||.||+|.+..+++.+|+|.+.... ....+.+.+|++++++++|||++++++.+ ..++..+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCEEE
Confidence 5888999999999999999998899999999987442 23356788999999999999999999984 3457899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC-CceEEccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD-MVAHVGDFGL 856 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~ 856 (1013)
+||||+++++|.+++..... ..+++.++.+++.|++.|++|||++ +++||||+|+||+++.+ +.+|++|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRCN----SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred EEEecCCCCCHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 99999999999999976532 3589999999999999999999999 99999999999999865 4689999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+....... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||...... ..
T Consensus 149 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-----~~----- 209 (256)
T cd08220 149 SKILSSKS---------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-----AL----- 209 (256)
T ss_pred ceecCCCc---------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-----HH-----
Confidence 98653211 122346788999999999888999999999999999999999998653211 00
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.......... . .....+..+.+++.+||+.+|++|||+.|+++
T Consensus 210 ---~~~~~~~~~~-------~----------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 210 ---VLKIMSGTFA-------P----------ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ---HHHHHhcCCC-------C----------CCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0011000000 0 00112456789999999999999999999986
No 299
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.1e-33 Score=309.28 Aligned_cols=263 Identities=22% Similarity=0.271 Sum_probs=200.2
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+++++.++||||+++++.+. .+..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE-----TKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe-----cCCE
Confidence 368899999999999999999999999999999874432 23456789999999999999999999853 4578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++++|.+++... +.+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNI------GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred EEEEEecCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCC
Confidence 89999999999999999765 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccc-------cCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccH
Q 001782 856 LARFLPPCSPATIL-------ETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTL 928 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~-------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~ 928 (1013)
+++........... ..........++..|+|||++.+..++.++|||||||++|||++|..||......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~---- 222 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE---- 222 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----
Confidence 98742111100000 0001112345788999999998889999999999999999999999999642111
Q ss_pred HHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHH
Q 001782 929 HEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCS 1003 (1013)
Q Consensus 929 ~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1003 (1013)
.... ...... ...|.. ....+..+.+++.+||+.||++||++.++.+.|+.
T Consensus 223 -~~~~--------~~~~~~-~~~~~~--------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 223 -ELFG--------QVISDD-IEWPEG--------------DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred -HHHH--------HHHhcc-cCCCCc--------------cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 1000 000000 000000 00124557899999999999999997666665554
No 300
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.7e-34 Score=333.41 Aligned_cols=267 Identities=25% Similarity=0.349 Sum_probs=196.7
Q ss_pred hhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCC-----
Q 001782 696 KATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSID----- 769 (1013)
Q Consensus 696 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 769 (1013)
+...+|+..+.||+||||.||+++++-+|+.||||++.... ......+.+|+..+++++|||||+++..+.+.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 44567888899999999999999999999999999997553 333466889999999999999999976532111
Q ss_pred --------------------------------------------------------c-----------------------
Q 001782 770 --------------------------------------------------------F----------------------- 770 (1013)
Q Consensus 770 --------------------------------------------------------~----------------------- 770 (1013)
.
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0
Q ss_pred -----------------------c-------ccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHH
Q 001782 771 -----------------------E-------EVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAI 820 (1013)
Q Consensus 771 -----------------------~-------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L 820 (1013)
. ..-..||=||||+..+++++++.+... -.....++++++|++||
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-----~~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-----SQRDEAWRLFREILEGL 710 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-----hhhHHHHHHHHHHHHHH
Confidence 0 002357889999988888888876321 14678899999999999
Q ss_pred HHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCC------CC----CCCccccCCCCCccccccccccccccc
Q 001782 821 EYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLP------PC----SPATILETPSSSTGIKGTVGYVAPEYG 890 (1013)
Q Consensus 821 ~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~------~~----~~~~~~~~~~~~~~~~gt~~y~aPE~~ 890 (1013)
+|+|++ |||||||||.||++|+++.|||+|||+|.... .. ............+..+||.-|+|||++
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999 99999999999999999999999999998721 00 001111122245678999999999998
Q ss_pred CCCC---CCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHH
Q 001782 891 MGGD---MSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIA 967 (1013)
Q Consensus 891 ~~~~---~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~ 967 (1013)
.+.. |+.|+|+||+|+|++||+. ||.........+.......+|.+ ..+.
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~----------------------- 840 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFF----------------------- 840 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-cccc-----------------------
Confidence 8754 9999999999999999996 56543222111111111112221 1111
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 968 KIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 968 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
......-.++++++++.||.+||||.|++.
T Consensus 841 --~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 841 --DPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred --cccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 111233468899999999999999999975
No 301
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.8e-33 Score=302.91 Aligned_cols=264 Identities=24% Similarity=0.281 Sum_probs=201.6
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
++|...++||.|++|.||+|.+..+++.||+|.+..... ....++.+|++++++++||||+++++++.. ......+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLD---ESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEc---cCCCeEE
Confidence 367888999999999999999988999999999874432 334678999999999999999999998753 2345789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++..... ....+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 78 lv~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 152 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKK--RGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVS 152 (287)
T ss_pred EEEEecCCCCHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccc
Confidence 99999999999998765322 124688999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
....... .....++..|+|||.+.+..++.++||||+||++|+|++|+.||...........+
T Consensus 153 ~~~~~~~----------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~------- 215 (287)
T cd06621 153 GELVNSL----------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIE------- 215 (287)
T ss_pred ccccccc----------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHH-------
Confidence 7543211 12345788999999999999999999999999999999999999764221011011
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
....+... ..+. .... .......+..+.+++.+||+.+|.+|||+.||++
T Consensus 216 --~~~~~~~~--~~~~----~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 216 --LLSYIVNM--PNPE----LKDE----PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred --HHHHHhcC--Cchh----hccC----CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 01110000 0000 0000 0000112356789999999999999999999987
No 302
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3.3e-33 Score=299.89 Aligned_cols=247 Identities=28% Similarity=0.434 Sum_probs=192.4
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeec
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYM 783 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 783 (1013)
++||+|+||.||+|... ++..||+|++..... .....+.+|++++++++||||+++++++. .....++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT-----QRQPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe-----cCCccEEEEECC
Confidence 47999999999999865 678899999864432 22346889999999999999999999964 336789999999
Q ss_pred cCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCC
Q 001782 784 ECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPC 863 (1013)
Q Consensus 784 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 863 (1013)
++++|.+++.... ..+++.+++.++.|++.|+.|+|++ +++||||||+||+++.++.+|++|||++......
T Consensus 75 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (250)
T cd05085 75 PGGDFLSFLRKKK-----DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG 146 (250)
T ss_pred CCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccc
Confidence 9999999987542 3578999999999999999999999 9999999999999999999999999998753321
Q ss_pred CCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhhCChhHHH
Q 001782 864 SPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMALPEKVME 942 (1013)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1013)
.. .......++..|+|||++.++.++.++||||||+++|++++ |..||...... . ...
T Consensus 147 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~-----~---------~~~ 205 (250)
T cd05085 147 IY-------SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ-----Q---------ARE 205 (250)
T ss_pred cc-------ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH-----H---------HHH
Confidence 11 01112234678999999998899999999999999999998 99998653111 0 000
Q ss_pred hhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 943 IVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 943 ~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
.+... .|+.. ...++..+.+++.+|++.+|++||++.|++++|.
T Consensus 206 ~~~~~------~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 206 QVEKG------YRMSC----------PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHcC------CCCCC----------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 00000 00000 0112456889999999999999999999999875
No 303
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.4e-34 Score=288.16 Aligned_cols=289 Identities=20% Similarity=0.262 Sum_probs=206.7
Q ss_pred hccCCCCCceeeccceEEEEEEECCCC----eEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCcc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENE----MAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFE 771 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 771 (1013)
...|+.++.||+|.||.||+|....+. +.+|+|.++.+.+ .......+|+..++.++||||+.+..++. .
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl----~ 98 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFL----S 98 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHh----c
Confidence 457899999999999999999664432 3689999975433 33456889999999999999999999863 3
Q ss_pred ccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC----C
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD----M 847 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~ 847 (1013)
.+...++++||.+ .+|.+.|+..+.... +.++...+..|..||+.|++|||++ =|+|||+||.||||..+ |
T Consensus 99 ~d~~v~l~fdYAE-hDL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG 173 (438)
T KOG0666|consen 99 HDKKVWLLFDYAE-HDLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERG 173 (438)
T ss_pred cCceEEEEehhhh-hhHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccC
Confidence 3688999999999 899999988765443 5899999999999999999999999 79999999999999877 8
Q ss_pred ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCc
Q 001782 848 VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGL 926 (1013)
Q Consensus 848 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~ 926 (1013)
.|||+|||+|+.+...- ..-......+-|.+|+|||.+.+. .||++.||||.||++.||++-++.|.+...+..
T Consensus 174 ~VKIaDlGlaR~~~~pl-----kpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~ 248 (438)
T KOG0666|consen 174 RVKIADLGLARLFNNPL-----KPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIK 248 (438)
T ss_pred eeEeecccHHHHhhccc-----cccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcc
Confidence 99999999999774321 112234567789999999998886 589999999999999999999998876422211
Q ss_pred --------cHHHHHHhh-CChh-----HHHhhhh-hhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCC
Q 001782 927 --------TLHEFAKMA-LPEK-----VMEIVDP-LLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSER 991 (1013)
Q Consensus 927 --------~~~~~~~~~-~~~~-----~~~~i~~-~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 991 (1013)
++..+.... .|.+ +...-+- .+..+...+.........-........+..++++.+++.+||.+|
T Consensus 249 ~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kR 328 (438)
T KOG0666|consen 249 TKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKR 328 (438)
T ss_pred cCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhh
Confidence 111111111 0100 0000000 000011111111000111111112122346889999999999999
Q ss_pred CCHHHHHHH
Q 001782 992 IQMTDVVAK 1000 (1013)
Q Consensus 992 Ps~~evl~~ 1000 (1013)
.|++++++.
T Consensus 329 Ita~qAleh 337 (438)
T KOG0666|consen 329 ITAEQALEH 337 (438)
T ss_pred ccHHHHhcc
Confidence 999998864
No 304
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.7e-33 Score=302.25 Aligned_cols=238 Identities=24% Similarity=0.440 Sum_probs=187.9
Q ss_pred CceeeccceEEEEEEECCCC----------eEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 705 NMIGQGSFGFVYRGNLGENE----------MAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
+.||+|+||.||+|.+..++ ..|++|++...... ...+.+|+.++++++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence 47999999999999997665 45788887644433 5778999999999999999999998642 4
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC-------
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM------- 847 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~------- 847 (1013)
..++||||+++++|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~ 145 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREK-----NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVP 145 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCce
Confidence 5689999999999999998753 2688999999999999999999999 999999999999999887
Q ss_pred ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCC--CCCcccchHHHHHHHHHHHh-CCCCCCCcCCC
Q 001782 848 VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG--DMSATGDVYSFGILLLEMFT-RRRPTDNMFND 924 (1013)
Q Consensus 848 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~ 924 (1013)
.+||+|||++..... .....++..|+|||++.+. .++.++|||||||++|||++ |..||......
T Consensus 146 ~~kl~Dfg~a~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~ 213 (259)
T cd05037 146 FIKLSDPGIPITVLS------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS 213 (259)
T ss_pred eEEeCCCCccccccc------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch
Confidence 799999999875432 1223466789999998876 78999999999999999999 57777653211
Q ss_pred CccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 925 GLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
....... .. . ..+ . + ....+.+++.+||..+|.+|||+.||++.|
T Consensus 214 --~~~~~~~-----------~~----~--~~~-~-----~-------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 214 --EKERFYQ-----------DQ----H--RLP-M-----P-------DCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred --hHHHHHh-----------cC----C--CCC-C-----C-------CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0000000 00 0 000 0 0 014578999999999999999999999886
No 305
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.9e-33 Score=308.65 Aligned_cols=275 Identities=23% Similarity=0.319 Sum_probs=201.6
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
++|++.++||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++|+||+++++++. .++..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFR-----RKGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEE-----ECCEE
Confidence 47889999999999999999999889999999987432 233467899999999999999999999964 35789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||++++.+..+.... ..+++.++..++.|++.|++|||+. +++|||++|+||++++++.+||+|||.
T Consensus 76 ~iv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~ 146 (288)
T cd07833 76 YLVFEYVERTLLELLEASP------GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGF 146 (288)
T ss_pred EEEEecCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeec
Confidence 9999999977776665543 4589999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH--
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK-- 933 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~-- 933 (1013)
+........ .......++..|+|||++.+. .++.++||||||+++|+|++|+.||......+ .......
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~ 218 (288)
T cd07833 147 ARALRARPA-------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYLIQKCL 218 (288)
T ss_pred ccccCCCcc-------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh
Confidence 886543221 112345678899999999888 78999999999999999999999997532111 0000000
Q ss_pred hhCChhHHHhhhhhhccchhhhh---ccCCCC-chhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARA---SNCGSH-RTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~---~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
...++....... .++..+. ...... ..+.......+..+.+++++||..+|++||+++++++
T Consensus 219 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 219 GPLPPSHQELFS----SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CCCCHHHhhhcc----cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 001111110000 0000000 000000 0000001123567899999999999999999999875
No 306
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.8e-33 Score=309.42 Aligned_cols=250 Identities=21% Similarity=0.293 Sum_probs=198.2
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIV 779 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 779 (1013)
.|.....||+|+||.||+|.+..+++.||+|++........+.+.+|+.+++.++|||++++++++. .++..++|
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~iv 96 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL-----VGEELWVL 96 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhee-----eCCeEEEE
Confidence 3444568999999999999998889999999997655555567889999999999999999999853 45788999
Q ss_pred EeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccccc
Q 001782 780 YEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARF 859 (1013)
Q Consensus 780 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 859 (1013)
|||+++++|.+++.. ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 97 ~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~ 166 (297)
T cd06659 97 MEFLQGGALTDIVSQ-------TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQ 166 (297)
T ss_pred EecCCCCCHHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhh
Confidence 999999999998754 3578999999999999999999999 999999999999999999999999999875
Q ss_pred CCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChh
Q 001782 860 LPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEK 939 (1013)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~ 939 (1013)
..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||...... ....
T Consensus 167 ~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~------- 227 (297)
T cd06659 167 ISKDV--------PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV----QAMK------- 227 (297)
T ss_pred ccccc--------ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH-------
Confidence 43211 1123356889999999999889999999999999999999999999642111 0000
Q ss_pred HHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 940 VMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 940 ~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.+... +... .......+..+.+++.+|++.+|.+||+++|+++.
T Consensus 228 ---~~~~~----~~~~----------~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 228 ---RLRDS----PPPK----------LKNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ---HHhcc----CCCC----------ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000 0000 00001123457789999999999999999999884
No 307
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2e-33 Score=304.47 Aligned_cols=254 Identities=24% Similarity=0.353 Sum_probs=202.5
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
++|+..+.||+|+||.||+|.+..+++.||+|++..... ...+++.+|++++++++||||+++++++. .....+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFY-----NNGDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeee-----cCCEEE
Confidence 368888999999999999999998999999999875432 34467889999999999999999999864 347899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHH-HCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
+++||+++++|.+++.... ..+++..+.+++.|++.|++|||+ . +++|+||||+||++++++.+||+|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~ 147 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQ-----GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGV 147 (265)
T ss_pred EEEEecCCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999998653 368889999999999999999999 8 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+....... .....++..|+|||++.+..++.++||||+|+++|+|++|+.||.........
T Consensus 148 ~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~--------- 208 (265)
T cd06605 148 SGQLVNSL----------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG--------- 208 (265)
T ss_pred chhhHHHH----------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc---------
Confidence 87542211 11156788999999999999999999999999999999999999764321111
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..+.++......+.. ... ......+.+++.+||..||++|||+.|++.
T Consensus 209 ---~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 209 ---IFELLQYIVNEPPPR-----------LPS-GKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred ---HHHHHHHHhcCCCCC-----------CCh-hhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 111111111111100 000 013456889999999999999999999975
No 308
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.8e-33 Score=305.42 Aligned_cols=254 Identities=21% Similarity=0.294 Sum_probs=193.3
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHH-HhcCCCCccceEEEEeecCCccccceE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEA-LRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
++|++.+.||+|+||.||+|++..+++.||+|+++.... ....++..|+.. ++..+||||+++++++. .+...
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~-----~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF-----REGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe-----cCCcE
Confidence 478899999999999999999999999999999875432 223455566665 56678999999999964 34678
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||++ ++|.+++...... ...+++.+++.++.|++.|++|||++. +++||||||+||+++.++.+||+|||.
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~ 150 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYDK--GLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGI 150 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999998 7898888654221 146899999999999999999999853 899999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCC----CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG----GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
+...... .......++..|+|||++.+ ..++.++|+||+||++|||++|+.||...... ...
T Consensus 151 ~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~-- 216 (283)
T cd06617 151 SGYLVDS---------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP---FQQ-- 216 (283)
T ss_pred ccccccc---------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC---HHH--
Confidence 8754321 11223457889999998865 45688999999999999999999998643211 111
Q ss_pred HhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
....+.......+. ...+..+.+++.+||..+|++||++.++++
T Consensus 217 -------~~~~~~~~~~~~~~----------------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 217 -------LKQVVEEPSPQLPA----------------EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred -------HHHHHhcCCCCCCc----------------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111100000000 112456789999999999999999999986
No 309
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.9e-33 Score=305.43 Aligned_cols=245 Identities=25% Similarity=0.309 Sum_probs=197.6
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++ .+...
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSF-----QDDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCe
Confidence 47889999999999999999999899999999986432 22345688999999999999999999985 44578
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~------~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKS------GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred EEEEEecCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCC
Confidence 99999999999999999775 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
++...... .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ...
T Consensus 147 ~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~---- 206 (290)
T cd05580 147 FAKRVKGR-----------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-----IQI---- 206 (290)
T ss_pred CccccCCC-----------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HHH----
Confidence 98754321 2234688999999999888899999999999999999999999975321 000
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-----CHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-----QMTDVVA 999 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 999 (1013)
...... ..+ ... ......+.+++.+||..||.+|| +++|+++
T Consensus 207 ----~~~~~~----~~~----~~~----------~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 207 ----YEKILE----GKV----RFP----------SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ----HHHHhc----CCc----cCC----------ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 001100 000 000 01134567899999999999999 6666653
No 310
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=5.9e-33 Score=301.08 Aligned_cols=261 Identities=25% Similarity=0.331 Sum_probs=203.9
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
++|++.+.||.|+||+||+|....++..||+|++.... ....+.+.+|+++++.++|+|++++++.+. .++..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV-----VGDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe-----eCCEEE
Confidence 47899999999999999999998889999999986433 224567899999999999999999999853 457889
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.++++.... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+|||++
T Consensus 76 iv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYP---RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred EEEeccCCCcHHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 99999999999999976432 13689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
..+....... ........|+..|+|||++... .++.++|+|||||++|||++|+.||....... ....
T Consensus 150 ~~~~~~~~~~----~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~------ 218 (267)
T cd06610 150 ASLADGGDRT----RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLML------ 218 (267)
T ss_pred HHhccCcccc----ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHH------
Confidence 8665432211 0112345688999999998877 78999999999999999999999997532211 0111
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
... ..+.. . .........+..+.+++.+|++.||++||++.|+++
T Consensus 219 ------~~~----~~~~~----~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 219 ------TLQ----NDPPS----L----ETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred ------Hhc----CCCCC----c----CCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000 00000 0 000001233456789999999999999999999986
No 311
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=8.6e-33 Score=306.46 Aligned_cols=281 Identities=25% Similarity=0.308 Sum_probs=200.6
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc--chhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG--ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
.++|++.++||+|+||.||+|.+..+++.||+|+++..... ....+.+|+.++++++|+||+++++++.. ...+.
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVG---KHLDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEec---CCCCe
Confidence 46899999999999999999999989999999998754322 22346789999999999999999998642 22356
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||++ ++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||
T Consensus 83 ~~lv~e~~~-~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 83 IFLVMEYCE-QDLASLLDNMP-----TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred EEEEEecCC-CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccc
Confidence 899999998 68988887642 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
.+....... .......++..|+|||++.+ ..++.++||||+||++|||++|+.||...... .........
T Consensus 154 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~-~~~~~~~~~ 224 (309)
T cd07845 154 LARTYGLPA--------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI-EQLDLIIQL 224 (309)
T ss_pred eeeecCCcc--------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHh
Confidence 998654321 11223345788999999866 45789999999999999999999999753211 111111111
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhH-HHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEI-AKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
...................+........... .........+.+++.+|++.||++|||+.|+++.
T Consensus 225 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 225 -LGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred -cCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000000000000000000000000000000 0111234567899999999999999999999863
No 312
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-34 Score=297.10 Aligned_cols=247 Identities=26% Similarity=0.358 Sum_probs=205.8
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec---cccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK---QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
.+.|+.-++||+||||.||-++.+.+|+.+|.|.+..+ .+.......+|..++++++.+.||.+--+ ++..+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA-----feTkd 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA-----FETKD 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee-----ecCCC
Confidence 45678889999999999999999999999999988633 23344557889999999999999887666 56679
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..|+|+..|.||+|.-.|..... ..+++..++.++.+|+.||++||+. +||+||+||+|||+|+.|+++|+|.
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~----~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDL 331 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGN----PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDL 331 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCC----CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeecc
Confidence 99999999999999998887644 5899999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCcc--HHHH-
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLT--LHEF- 931 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~--~~~~- 931 (1013)
|+|..+....+ ....+||.+|||||++.+..|+...|.||+||++|||+.|+.||......... ....
T Consensus 332 GLAvei~~g~~---------~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~ 402 (591)
T KOG0986|consen 332 GLAVEIPEGKP---------IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRT 402 (591)
T ss_pred ceEEecCCCCc---------cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHH
Confidence 99987654332 34458999999999999999999999999999999999999999864322111 1111
Q ss_pred ------HHhhCChhHHHhhhhhhccchhhhhccCCCCchh
Q 001782 932 ------AKMALPEKVMEIVDPLLLLDLEARASNCGSHRTE 965 (1013)
Q Consensus 932 ------~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~ 965 (1013)
....+++++..+....+..||.+|....+....+
T Consensus 403 ~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~e 442 (591)
T KOG0986|consen 403 LEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQE 442 (591)
T ss_pred hcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcch
Confidence 1123567788899999999999998877554443
No 313
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=5.1e-33 Score=305.92 Aligned_cols=279 Identities=23% Similarity=0.299 Sum_probs=199.8
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
.++|++.+.||+|+||.||+|++..+++.||+|.++.... .....+.+|+.++++++||||+++++++... +...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---~~~~ 80 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS---NLDK 80 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec---CCCc
Confidence 3578999999999999999999998899999999974432 2234567899999999999999999986432 2378
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||++ ++|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||
T Consensus 81 ~~lv~e~~~-~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g 151 (293)
T cd07843 81 IYMVMEYVE-HDLKSLMETMK-----QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFG 151 (293)
T ss_pred EEEEehhcC-cCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecC
Confidence 999999998 69999887642 2589999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
.+....... .......++..|+|||++.+. .++.++||||+|+++|||++|+.||....... ........
T Consensus 152 ~~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~ 222 (293)
T cd07843 152 LAREYGSPL--------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIFKL 222 (293)
T ss_pred ceeeccCCc--------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Confidence 988654321 112234578899999988764 46889999999999999999999997532211 11111111
Q ss_pred hC-Ch-hHHHhhhhhhccc--hhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 AL-PE-KVMEIVDPLLLLD--LEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~~-~~-~~~~~i~~~l~~~--~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.. +. ........+.... ...+... .......+. ......+.+++.+|++.||++|||+.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 223 LGTPTEKIWPGFSELPGAKKKTFTKYPY-NQLRKKFPA-LSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hCCCchHHHHHhhccchhcccccccccc-hhhhccccc-cCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00 00 0000000000000 0000000 000000000 002456788999999999999999999985
No 314
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=5.4e-33 Score=304.03 Aligned_cols=249 Identities=22% Similarity=0.313 Sum_probs=198.0
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIV 779 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 779 (1013)
.|...++||+|++|.||+|.+..+++.|++|++........+.+.+|+.+++.++||||+++++++. ..+..++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-----~~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL-----VGDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEE-----cCCeEEEE
Confidence 4555689999999999999998889999999987554444566889999999999999999999854 44778999
Q ss_pred EeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccccc
Q 001782 780 YEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARF 859 (1013)
Q Consensus 780 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 859 (1013)
+||+++++|.+++... .+++.++..++.|++.|++|||++ +++||||+|+||+++.++.++|+|||.+..
T Consensus 95 ~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~ 164 (285)
T cd06648 95 MEFLEGGALTDIVTHT-------RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQ 164 (285)
T ss_pred EeccCCCCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchh
Confidence 9999999999998762 578899999999999999999999 999999999999999999999999998864
Q ss_pred CCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChh
Q 001782 860 LPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEK 939 (1013)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~ 939 (1013)
..... .......|+..|+|||...+..++.++||||+||++|||++|+.||..... ....
T Consensus 165 ~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~----~~~~-------- 224 (285)
T cd06648 165 VSKEV--------PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP----LQAM-------- 224 (285)
T ss_pred hccCC--------cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH----HHHH--------
Confidence 43211 112234588999999999888899999999999999999999999864211 0000
Q ss_pred HHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 940 VMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 940 ~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..+... .+ +. .......+..+.+++.+||+.+|++||++.|+++
T Consensus 225 --~~~~~~---~~---~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 225 --KRIRDN---LP---PK--------LKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred --HHHHhc---CC---CC--------CcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 000000 00 00 0000112356889999999999999999999986
No 315
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.2e-32 Score=298.11 Aligned_cols=253 Identities=25% Similarity=0.358 Sum_probs=204.5
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
++|++.+.||+|++|.||+|++..+++.||+|++..... ...+.+.+|++++++++|||++++++++. .....+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY-----KEGEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-----cCCeEE
Confidence 368889999999999999999998899999999875543 34567899999999999999999999954 447899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHH-HCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
+||||+++++|.+++... ..+++..++.++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.
T Consensus 76 lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~ 146 (264)
T cd06623 76 IVLEYMDGGSLADLLKKV------GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGI 146 (264)
T ss_pred EEEEecCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCcc
Confidence 999999999999999865 468999999999999999999999 9 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+........ ......++..|+|||.+.+..++.++||||||+++|+|++|+.||...... ..
T Consensus 147 ~~~~~~~~~--------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~-------- 208 (264)
T cd06623 147 SKVLENTLD--------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SF-------- 208 (264)
T ss_pred ceecccCCC--------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CH--------
Confidence 876532211 112345789999999999999999999999999999999999999764320 11
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHH-HHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEE-CLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.+.......... +.. ... .+..+.+++.+|++.+|++||++.|+++.
T Consensus 209 ----~~~~~~~~~~~~---~~~----------~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 209 ----FELMQAICDGPP---PSL----------PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ----HHHHHHHhcCCC---CCC----------CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111111110000 000 001 34568899999999999999999999874
No 316
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.1e-32 Score=297.40 Aligned_cols=252 Identities=32% Similarity=0.554 Sum_probs=198.6
Q ss_pred CCCCCceeeccceEEEEEEECCCC----eEEEEEEEeecccc-chhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENE----MAVAVKVMNLKQRG-ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
+++.+.||.|+||.||+|++...+ ..||+|++...... ..+.+..|+++++.++|+||+++++++. ..+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCT-----EEEP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEc-----CCCe
Confidence 457789999999999999997665 88999999754433 4567899999999999999999999864 3478
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.+++|||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg 148 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRP----KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFG 148 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhh----ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccC
Confidence 9999999999999999987532 1289999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
.+.......... .....++..|+|||.+.+..++.++||||+|+++|+|++ |..||..... ..
T Consensus 149 ~~~~~~~~~~~~-------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-----~~---- 212 (258)
T smart00219 149 LSRDLYDDDYYK-------KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-----EE---- 212 (258)
T ss_pred Cceecccccccc-------cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-----HH----
Confidence 998654331111 112236789999999988889999999999999999998 7888764211 00
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
..+.+.... ++.. ....+..+.+++.+|+..||++|||+.|+++.|
T Consensus 213 -----~~~~~~~~~------~~~~----------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 213 -----VLEYLKKGY------RLPK----------PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----HHHHHhcCC------CCCC----------CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 001010000 0000 011345688899999999999999999998764
No 317
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.2e-33 Score=311.50 Aligned_cols=285 Identities=21% Similarity=0.265 Sum_probs=205.1
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 368999999999999999999999999999999987432 233456788999999999999999998865432 34567
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+. ++|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg 152 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSD------QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFG 152 (334)
T ss_pred EEEEEehhh-hhHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccc
Confidence 899999997 6899988754 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
++......... .........|+..|+|||++.+ ..++.++|||||||++|||++|+.||....... ........
T Consensus 153 ~~~~~~~~~~~----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~-~~~~~~~~ 227 (334)
T cd07855 153 MARGLSSSPTE----HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH-QLKLILSV 227 (334)
T ss_pred cceeecccCcC----CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH-HHHHHHHH
Confidence 99765332111 1111234568899999998765 468899999999999999999999997532211 11111110
Q ss_pred hCChhHHHhhhhhhccchh---hhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLE---ARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~---~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
......++++........ +......... -.......+..+.+++.+|++.+|.+||++++++..
T Consensus 228 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 228 -LGSPSEEVLNRIGSDRVRKYIQNLPRKQPVP-WSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred -hCCChhHhhhhhchhhHHHHHhhcccCCCCC-HHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000001111100000000 0000000000 000112335678999999999999999999998873
No 318
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=7.7e-33 Score=307.37 Aligned_cols=286 Identities=22% Similarity=0.331 Sum_probs=200.2
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCc---c
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDF---E 771 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~ 771 (1013)
..++|++.++||+|+||.||+|++..+++.||+|.+..... .....+.+|++++++++||||+++++++..... .
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 35689999999999999999999999999999999864332 223356789999999999999999999865321 1
Q ss_pred ccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEE
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHV 851 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 851 (1013)
.....++||||+. +++.+++.... ..+++.+++.++.|++.|++|||++ +++|+||||+||+++.++.+||
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 160 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSNKN-----VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKL 160 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEE
Confidence 2346799999998 68888876542 3689999999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHH
Q 001782 852 GDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHE 930 (1013)
Q Consensus 852 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~ 930 (1013)
+|||.+..+....... ........++..|+|||++.+. .++.++||||||+++|||++|..||...... .....
T Consensus 161 ~dfg~~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~-~~~~~ 235 (310)
T cd07865 161 ADFGLARAFSLSKNSK----PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ-HQLTL 235 (310)
T ss_pred CcCCCcccccCCcccC----CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHH
Confidence 9999998654322110 1112345678899999987765 4788999999999999999999998753211 11111
Q ss_pred HHH--hhCChhHHHhhhhhhccchhhhhccCCCCchhHHH---HHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 931 FAK--MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAK---IEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 931 ~~~--~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
... ...+++...-... .+................. .......+.+++.+|+..||.+|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 236 ISQLCGSITPEVWPGVDK---LELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHHHhCCCChhhcccccc---hhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 110 0111110000000 0000000000000000000 0001245678999999999999999999985
No 319
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-34 Score=284.51 Aligned_cols=241 Identities=25% Similarity=0.325 Sum_probs=201.3
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec---cccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK---QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
-++|...++||+|.||.|.+++.+.+++.+|+|+++.+ ...+...-..|-++++..+||.+..+--. ++..+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYs-----FQt~d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYS-----FQTQD 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhh-----hccCc
Confidence 35788889999999999999999999999999999743 23344455779999999999998877544 66779
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..|+||||+.||.|.-.+.+. ..+++...+.+...|+.||.|||++ +||+||+|.+|.|+|.||++||+||
T Consensus 242 rlCFVMeyanGGeLf~HLsre------r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLSRE------RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred eEEEEEEEccCceEeeehhhh------hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeec
Confidence 999999999999999888765 5789999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH--
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA-- 932 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~-- 932 (1013)
|+++.- .........++|||.|.|||++....|+.++|.|.+||++|||++|+.||.....+. .+..+.
T Consensus 313 GLCKE~--------I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k-LFeLIl~e 383 (516)
T KOG0690|consen 313 GLCKEE--------IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK-LFELILME 383 (516)
T ss_pred ccchhc--------ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH-HHHHHHhh
Confidence 999732 233445678999999999999999999999999999999999999999998643321 111111
Q ss_pred ----HhhCChhHHHhhhhhhccchhhhhccCCC
Q 001782 933 ----KMALPEKVMEIVDPLLLLDLEARASNCGS 961 (1013)
Q Consensus 933 ----~~~~~~~~~~~i~~~l~~~~~~R~~~~~~ 961 (1013)
....++++..++...+.+||.+|......
T Consensus 384 d~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpd 416 (516)
T KOG0690|consen 384 DLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPD 416 (516)
T ss_pred hccCCccCCHHHHHHHHHHhhcChHhhcCCCch
Confidence 12346678888888999999988765543
No 320
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.7e-32 Score=297.44 Aligned_cols=256 Identities=21% Similarity=0.338 Sum_probs=183.2
Q ss_pred CceeeccceEEEEEEECCC--CeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEe
Q 001782 705 NMIGQGSFGFVYRGNLGEN--EMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~--~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
+.||+|+||.||+|+.... ...+++|.+.... ....+.+.+|+.+++.++||||+++++.+. .....++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-----~~~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCV-----EAIPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEec-----CCCccEEEEe
Confidence 3699999999999976433 2346677665433 234567899999999999999999999964 3467899999
Q ss_pred eccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCC
Q 001782 782 YMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLP 861 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 861 (1013)
|+++|+|.+++...... ....++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 76 ~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~ 150 (268)
T cd05086 76 YCELGDLKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRY 150 (268)
T ss_pred cCCCCcHHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccC
Confidence 99999999999764321 13467778889999999999999999 99999999999999999999999999986321
Q ss_pred CCCCCccccCCCCCcccccccccccccccCC-------CCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHH
Q 001782 862 PCSPATILETPSSSTGIKGTVGYVAPEYGMG-------GDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~ 933 (1013)
... .........++..|+|||++.. ..++.++|||||||++|||++ |..||...... .......
T Consensus 151 ~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-~~~~~~~- 222 (268)
T cd05086 151 KED------YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR-EVLNHVI- 222 (268)
T ss_pred cch------hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHH-
Confidence 111 0111234567889999998753 245789999999999999997 56677542111 0000000
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
.+....+. ++.... .....+.+++..|| .+|++||+++||++.|.
T Consensus 223 ---~~~~~~~~----------~~~~~~----------~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 223 ---KDQQVKLF----------KPQLEL----------PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ---hhcccccC----------CCccCC----------CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 00000000 011100 11234677888899 67999999999998874
No 321
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5.5e-33 Score=311.57 Aligned_cols=282 Identities=22% Similarity=0.270 Sum_probs=204.8
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec--cccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK--QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
.++|.+.+.||+|+||+||+|++..+++.||||.+... .......+.+|+.+++.++||||+++++++..........
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45899999999999999999999989999999998643 2233456788999999999999999999876443333456
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+. ++|.+++... +.+++.++..++.|++.|+.|||++ +++||||||+||+++.++.+||+|||
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS------QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCc
Confidence 899999997 7899888764 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
++....... .......++..|+|||++.. ..++.++|||||||++|+|++|+.||...... .........
T Consensus 154 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~ 224 (337)
T cd07858 154 LARTTSEKG--------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV-HQLKLITEL 224 (337)
T ss_pred cccccCCCc--------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHHH
Confidence 997553211 11233457889999998765 46889999999999999999999999753211 111111110
Q ss_pred ---hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 935 ---ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 935 ---~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
..++....+.+... ....++....... ........++..+.+++.+|++.+|++|||++|+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 225 LGSPSEEDLGFIRNEKA-RRYIRSLPYTPRQ-SFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hCCCChHHhhhcCchhh-hHHHHhcCccccc-CHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00111100000000 0000000000000 0001112345678899999999999999999999876
No 322
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.4e-32 Score=301.21 Aligned_cols=275 Identities=21% Similarity=0.323 Sum_probs=201.0
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
+|++.++||+|++|.||+|++..++..||+|++..... ...+.+.+|++++++++||||+++++++. ..+..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIH-----TENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEe-----eCCcEEE
Confidence 58889999999999999999998999999999975433 23456788999999999999999999964 3467899
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
||||++ ++|.+++..... ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|||.+.
T Consensus 76 v~e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 76 VFEYMD-KDLKKYMDTHGV---RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred EEecCC-ccHHHHHHhcCC---CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 999999 589998876432 13689999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC-
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL- 936 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~- 936 (1013)
...... .......++..|+|||++.+. .++.++||||+||++|+|++|+.||...... ...........
T Consensus 149 ~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~ 219 (284)
T cd07836 149 AFGIPV--------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRIMGT 219 (284)
T ss_pred hhcCCc--------cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCC
Confidence 543211 112234568899999987664 5688999999999999999999999764322 11111111110
Q ss_pred C--hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 P--EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 ~--~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+ .....+. .. ........... ...........+..+.+++.+|++.||.+||+++|+++
T Consensus 220 ~~~~~~~~~~-~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 220 PTESTWPGIS-QL--PEYKPTFPRYP-PQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CChhhHHHHh-cC--chhcccccCCC-hHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1 0111110 00 00000000000 00001111234567889999999999999999999975
No 323
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.2e-32 Score=304.52 Aligned_cols=283 Identities=19% Similarity=0.279 Sum_probs=201.7
Q ss_pred cCCCCCceeeccceEEEEEEECC--CCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGE--NEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
+|++.++||+|+||.||+|.+.. ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLE---HADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeC---CCCc
Confidence 47888999999999999999987 78999999997532 3334667889999999999999999999753 2336
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC----CCceE
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH----DMVAH 850 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~----~~~~k 850 (1013)
..++||||++ +++.+++...... ....+++..++.++.|++.|++|||+. +|+||||||+||+++. ++.+|
T Consensus 78 ~~~lv~e~~~-~~l~~~~~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~k 152 (316)
T cd07842 78 SVYLLFDYAE-HDLWQIIKFHRQA-KRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVK 152 (316)
T ss_pred eEEEEEeCCC-cCHHHHHHhhccC-CCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEE
Confidence 7999999998 5777777543221 113688999999999999999999999 9999999999999999 89999
Q ss_pred EccccccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHH
Q 001782 851 VGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLH 929 (1013)
Q Consensus 851 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~ 929 (1013)
|+|||++......... ........++..|+|||++.+. .++.++|||||||++|+|++|+.||...........
T Consensus 153 l~Dfg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~ 227 (316)
T cd07842 153 IGDLGLARLFNAPLKP-----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSN 227 (316)
T ss_pred ECCCccccccCCCccc-----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccc
Confidence 9999999865432211 1122345678999999987764 578999999999999999999999976433220000
Q ss_pred HHHHhhCChhHHHhhhhhhccchhhh--------------hccCCCCc-hhHHH----HHHHHHHHHHHhhhcccCCCCC
Q 001782 930 EFAKMALPEKVMEIVDPLLLLDLEAR--------------ASNCGSHR-TEIAK----IEECLVAIVRIGVLCSMESPSE 990 (1013)
Q Consensus 930 ~~~~~~~~~~~~~~i~~~l~~~~~~R--------------~~~~~~~~-~~~~~----~~~~~~~l~~l~~~cl~~dP~~ 990 (1013)
.+.. ....+++..+-..++..+ ........ ..... .......+.+++.+|++.||++
T Consensus 228 ~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~ 303 (316)
T cd07842 228 PFQR----DQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTK 303 (316)
T ss_pred hhHH----HHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCccc
Confidence 0000 011111111100000000 00000000 01111 0123456889999999999999
Q ss_pred CCCHHHHHH
Q 001782 991 RIQMTDVVA 999 (1013)
Q Consensus 991 RPs~~evl~ 999 (1013)
|||+.|+++
T Consensus 304 Rps~~eil~ 312 (316)
T cd07842 304 RITAEEALE 312 (316)
T ss_pred CcCHHHHhc
Confidence 999999975
No 324
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.4e-32 Score=302.86 Aligned_cols=285 Identities=19% Similarity=0.219 Sum_probs=199.8
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCC-CCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIR-HRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 775 (1013)
++|++.+.||+|+||.||+|.+..+++.||+|+++.... .....+.+|+.+++++. ||||+++++++...+......
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 468899999999999999999998999999999864432 23356888999999995 699999999876443323345
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC-CCceEEccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH-DMVAHVGDF 854 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DF 854 (1013)
.++||||++ +++.+++...... ....+++.+++.++.||+.||+|||++ +|+||||||+||+++. ++.+||+||
T Consensus 81 ~~lv~e~~~-~~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 81 LYLVFEYLD-SDLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred EEEEeeccC-cCHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 899999999 5899988764321 124689999999999999999999999 9999999999999998 889999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
|+++.+.... .......+++.|+|||++.+ ..++.++||||||+++|+|++|..||........ ......
T Consensus 156 g~~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~ 226 (295)
T cd07837 156 GLGRAFSIPV--------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ-LLHIFK 226 (295)
T ss_pred ccceecCCCc--------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHH
Confidence 9987543211 11122346788999998765 4578999999999999999999999975321111 111110
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
....+....+.......+....+.... .............+.+++.+|++.||.+||++.|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 227 LLGTPTEQVWPGVSKLRDWHEFPQWKP--QDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HhCCCChhhCcchhhccchhhcCcccc--hhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000000000000000000000000 0000111234566889999999999999999999875
No 325
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.1e-32 Score=309.39 Aligned_cols=280 Identities=21% Similarity=0.295 Sum_probs=203.0
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec--cccchhHHHHHHHHHhcC-CCCccceEEEEeecCCcccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK--QRGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 773 (1013)
..++|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++++ +||||+++++++.. .+.
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~---~~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA---END 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc---CCC
Confidence 456899999999999999999999888999999988532 222345677899999999 99999999998642 234
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++||||++ ++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d 150 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLAD 150 (337)
T ss_pred ceEEEEecccc-cCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEee
Confidence 56899999998 6999888653 578889999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
||.+.......... .........|+..|+|||++.+ ..++.++||||||+++|+|++|+.||........ .....
T Consensus 151 ~g~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~ 226 (337)
T cd07852 151 FGLARSLSELEENP---ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKII 226 (337)
T ss_pred ccchhccccccccc---cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH
Confidence 99998664322110 1112334568999999998765 4578899999999999999999999975322211 11111
Q ss_pred Hhh--CChh-HHHh----hhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 933 KMA--LPEK-VMEI----VDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 933 ~~~--~~~~-~~~~----i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
... .+.. ...+ .+.++...+. .............+..+.+++.+||+.||++|||+.++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 227 EVIGPPSAEDIESIKSPFAATMLDSLPS------RPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHhCCCCHHHHHHHHhhhHHHhhhhccc------ccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 110 0100 1100 0001100000 00000011112245678999999999999999999999874
No 326
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1e-32 Score=300.97 Aligned_cols=248 Identities=24% Similarity=0.349 Sum_probs=196.7
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCC---CCccceEEEEeecCCccccce
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIR---HRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~ 775 (1013)
.|++.+.||+|+||.||+|.+..+++.||+|++.... ....+++.+|+.++++++ |||++++++++. .+..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-----~~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-----KGPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-----eCCE
Confidence 4788899999999999999998899999999987442 334467889999999986 999999999864 4477
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++||||+++++|.++++.. .+++..++.++.|++.|+.|||+. +++||||+|+||++++++.++|+|||
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred EEEEEecCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCC
Confidence 89999999999999998653 678999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
.+..+.... .......|+..|+|||++.++ .++.++|||||||++|+|++|..||...... ...
T Consensus 147 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~-- 211 (277)
T cd06917 147 VAALLNQNS--------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAM-- 211 (277)
T ss_pred ceeecCCCc--------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhh--
Confidence 997654322 112334688999999988654 4688999999999999999999999753111 000
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..+... .+ +.... ...+..+.+++.+||+.||++||++.|+++
T Consensus 212 -------~~~~~~---~~---~~~~~---------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 212 -------MLIPKS---KP---PRLED---------NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred -------hccccC---CC---CCCCc---------ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 000000 00 00000 012356788999999999999999999976
No 327
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=9.9e-33 Score=299.65 Aligned_cols=255 Identities=25% Similarity=0.404 Sum_probs=197.9
Q ss_pred cCCCCCceeeccceEEEEEEECC-CCeEEEEEEEeecc----------ccchhHHHHHHHHHhc-CCCCccceEEEEeec
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGE-NEMAVAVKVMNLKQ----------RGATKSFVAECEALRN-IRHRNLIKIITVCSS 767 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~ 767 (1013)
.|++.+.||+|+||.||+|.+.. .++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++.
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~- 79 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL- 79 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc-
Confidence 47889999999999999999987 67889999886322 1123456778887765 79999999999863
Q ss_pred CCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCceEecCC
Q 001782 768 IDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHH-HCHPPIVHGDLKPSNVLLDHD 846 (1013)
Q Consensus 768 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~ 846 (1013)
.++..++||||+++++|.+++...... ...+++..++.++.|++.|+.|||+ . +++|+||+|+||+++.+
T Consensus 80 ----~~~~~~lv~e~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 80 ----ENDRLYIVMDLIEGAPLGEHFNSLKEK--KQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGED 150 (269)
T ss_pred ----cCCeEEEEEecCCCCcHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCC
Confidence 457899999999999999988653211 1468999999999999999999996 5 89999999999999999
Q ss_pred CceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCc
Q 001782 847 MVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGL 926 (1013)
Q Consensus 847 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~ 926 (1013)
+.+||+|||.+....... ......|+..|+|||+..+..++.++||||||+++|||++|+.||.....
T Consensus 151 ~~~~l~dfg~~~~~~~~~---------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~--- 218 (269)
T cd08528 151 DKVTITDFGLAKQKQPES---------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM--- 218 (269)
T ss_pred CcEEEecccceeeccccc---------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH---
Confidence 999999999997643221 23345688999999999988899999999999999999999999864211
Q ss_pred cHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 927 TLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 927 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
... ...+........+. ...+..+.+++.+||+.||++||++.||.++++
T Consensus 219 --~~~--------~~~~~~~~~~~~~~----------------~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 219 --LSL--------ATKIVEAVYEPLPE----------------GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred --HHH--------HHHHhhccCCcCCc----------------ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 000 00111100000000 012346788999999999999999999999875
No 328
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.4e-32 Score=298.89 Aligned_cols=274 Identities=18% Similarity=0.223 Sum_probs=194.9
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCC-CCccceEEEEeecCCccccceEEE
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIR-HRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
|++.++||+|+||.||+|++..+++.||+|+++... ........+|+.+++++. |||++++++++... ..+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence 677899999999999999999899999999987432 222234457888898885 99999999997532 2367899
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
||||++ +++.+++.... ..+++.+++.++.|++.||+|||+. +++||||+|+||+++. +.+||+|||.++
T Consensus 78 v~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 78 VFELMD-MNLYELIKGRK-----RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred EEecCC-ccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccc
Confidence 999998 68888887542 3689999999999999999999999 9999999999999999 999999999997
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
...... ......++..|+|||++.. +.++.++||||+||++|||++|..||......+ ..... .....
T Consensus 148 ~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~-~~~~~-~~~~~ 216 (282)
T cd07831 148 GIYSKP---------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD-QIAKI-HDVLG 216 (282)
T ss_pred ccccCC---------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH-HHHHH-HHHcC
Confidence 653211 1123457889999997644 557889999999999999999999996532111 11111 11111
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchh-HHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTE-IAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
....++. .................... .......+..+.+++.+||+.+|++||+++|+++
T Consensus 217 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 217 TPDAEVL-KKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred CCCHHHH-HhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 1111110 00000000000000000000 0111234678899999999999999999999986
No 329
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.4e-32 Score=304.28 Aligned_cols=248 Identities=25% Similarity=0.359 Sum_probs=195.7
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
..+|+..++||+|+||+||+|++..+++.||+|++..... ...+++.+|+++++.++||||+++++++. ..+
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-----~~~ 88 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL-----REH 88 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE-----eCC
Confidence 4579999999999999999999988899999999864332 22356889999999999999999999974 346
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..++||||+. |++.+++.... ..+++.++..++.|++.|+.|||+. +++||||+|+||++++++.+||+||
T Consensus 89 ~~~lv~e~~~-g~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~df 159 (307)
T cd06607 89 TAWLVMEYCL-GSASDILEVHK-----KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADF 159 (307)
T ss_pred eEEEEHHhhC-CCHHHHHHHcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeec
Confidence 7899999998 68877776432 3689999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM---GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEF 931 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~ 931 (1013)
|++..... .....++..|+|||++. ...++.++||||||+++|||++|+.||....... .
T Consensus 160 g~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~----~- 222 (307)
T cd06607 160 GSASLVSP------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----A- 222 (307)
T ss_pred CcceecCC------------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH----H-
Confidence 99875432 12345788999999874 4568889999999999999999999986531110 0
Q ss_pred HHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 932 AKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
...... .+ .+.. ....++..+.+++.+||+.+|++||++.+|+..
T Consensus 223 --------~~~~~~----~~---~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 223 --------LYHIAQ----ND---SPTL---------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred --------HHHHhc----CC---CCCC---------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000 00 0000 011234568899999999999999999999874
No 330
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.1e-33 Score=305.64 Aligned_cols=202 Identities=27% Similarity=0.418 Sum_probs=180.3
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccc--hhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGA--TKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
-...|.+.+.||+|.|+.|.+|++..++..||||+++...-.. ...+.+|+++|+.++||||++++.+. +...
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~-----~t~~ 128 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVI-----ETEA 128 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeee-----eecc
Confidence 4568999999999999999999999999999999998554432 24488999999999999999999994 5568
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..|+||||+.+|.+.+|+... +++.+.++..++.|+.+|++|+|++ .|||||||++||+++.+.++||+||
T Consensus 129 ~lylV~eya~~ge~~~yl~~~------gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDf 199 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKH------GRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADF 199 (596)
T ss_pred eeEEEEEeccCchhHHHHHhc------ccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeecc
Confidence 899999999999999999987 5677789999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCC-CcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDM-SATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
|++.++.. .......+|++.|.|||++.+..| ++++|+||+|+++|.|+.|..||+..
T Consensus 200 gfS~~~~~---------~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~ 258 (596)
T KOG0586|consen 200 GFSTFFDY---------GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ 258 (596)
T ss_pred ccceeecc---------cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc
Confidence 99987653 233567899999999999998876 56899999999999999999999863
No 331
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=5.3e-33 Score=299.75 Aligned_cols=248 Identities=24% Similarity=0.349 Sum_probs=199.7
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
+|++.++||+|+||.||+|++..++..||+|++.... ....+.+.+|++++++++||||+++++.+ .++...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSF-----QDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhh-----cCCCeE
Confidence 4788999999999999999999889999999997432 23456789999999999999999999884 456789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++|+||+.+++|.+++... ..+++.++..++.|+++|+.|||+. +++|+||+|+||++++++.++|+|||.
T Consensus 76 ~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQK------VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred EEEEeCCCCCCHHHHHHhc------CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 9999999999999999765 4688999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+....... ......|+..|+|||++.+..++.++|+||+|+++|+|++|..||...... ....+
T Consensus 147 ~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~----- 210 (258)
T cd05578 147 ATKVTPDT---------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQI----- 210 (258)
T ss_pred ccccCCCc---------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHH-----
Confidence 87553221 123355788999999999888999999999999999999999999764321 01111
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCH--HHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQM--TDVV 998 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~--~evl 998 (1013)
....... ++. .+...+..+.+++.+||+.||.+||++ +|++
T Consensus 211 ----~~~~~~~-------~~~----------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 211 ----RAKQETA-------DVL----------YPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ----HHHhccc-------ccc----------CcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0000000 000 001223567899999999999999999 6654
No 332
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.4e-32 Score=301.36 Aligned_cols=254 Identities=24% Similarity=0.349 Sum_probs=204.1
Q ss_pred hhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 696 KATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 696 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
...+.|++.+.||+|++|.||+|.+..++..|++|++..... ..+.+.+|++++++++|+|++++++++. ....
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 89 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYL-----VGDE 89 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEE-----ECCE
Confidence 456789999999999999999999988899999999975544 4567889999999999999999999864 3478
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.++|+||+++++|.+++.... ..+++.++..++.|++.|++|||+. |++|+||+|+||+++.++.+||+|||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~ 161 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNF-----VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFG 161 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccc
Confidence 999999999999999998752 2689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
.+....... .......++..|+|||++.+..++.++||||||+++|+|++|+.||...... ...
T Consensus 162 ~~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~----~~~---- 225 (286)
T cd06614 162 FAAQLTKEK--------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL----RAL---- 225 (286)
T ss_pred hhhhhccch--------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH----HHH----
Confidence 986543211 1122345788999999999888999999999999999999999998642111 000
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..+... .+ .........+..+.+++.+|++.+|.+||++.++++
T Consensus 226 -----~~~~~~----~~-----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 226 -----FLITTK----GI-----------PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred -----HHHHhc----CC-----------CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 000000 00 000011123456889999999999999999999986
No 333
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.2e-32 Score=307.68 Aligned_cols=282 Identities=18% Similarity=0.242 Sum_probs=194.8
Q ss_pred Cceeec--cceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQG--SFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
..||+| +||+||+|++..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++. .++..++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-----~~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT-----TGSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe-----cCCceEEEE
Confidence 456666 999999999998999999999874432 23467889999999999999999999964 457789999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+.++++.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++||+.+...
T Consensus 79 e~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~ 151 (328)
T cd08226 79 PFMAYGSANSLLKTYFP----EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSL 151 (328)
T ss_pred ecccCCCHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence 99999999999887532 3588999999999999999999999 9999999999999999999999999865433
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCC--CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC--
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGG--DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL-- 936 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~-- 936 (1013)
........ ..........++..|+|||++.+. .++.++||||+||++|||++|+.||..................
T Consensus 152 ~~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 230 (328)
T cd08226 152 VRNGQKAK-VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSP 230 (328)
T ss_pred hccCcccc-ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCC
Confidence 21111000 000001122356779999998764 4788999999999999999999999764322111111100000
Q ss_pred ------ChhHHHhhhhhhccc-----hhhhhc---cCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 ------PEKVMEIVDPLLLLD-----LEARAS---NCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 ------~~~~~~~i~~~l~~~-----~~~R~~---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+.............+ ...+.. .........+....+...+.+++++||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 231 LDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred ccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 000000000000000 000000 000000111223345678899999999999999999999975
No 334
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.3e-32 Score=301.04 Aligned_cols=274 Identities=22% Similarity=0.316 Sum_probs=198.3
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
|++.+.||.|++|.||+|.+..++..||+|++..... ...+.+.+|+++++.++|||++++++++. ++...++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-----~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH-----SENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec-----cCCeEEE
Confidence 6788999999999999999988999999999875432 22356889999999999999999999964 4478999
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
+|||++ ++|.+++..... ..+++..++.++.|++.||+|||++ +++||||+|+||+++.++.+||+|||.+.
T Consensus 76 v~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSPL----TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred EEeccC-cCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 999996 799999876532 3689999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh-C
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA-L 936 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~-~ 936 (1013)
...... .......++..|+|||++.+. .++.++||||||+++|+|++|+.||........ ........ .
T Consensus 148 ~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~ 218 (283)
T cd07835 148 AFGVPV--------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ-LFRIFRTLGT 218 (283)
T ss_pred ccCCCc--------cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCC
Confidence 543211 111223468899999987664 578899999999999999999999975322111 11111110 0
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchh-HHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTE-IAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+... ... .....+..+.......... .......+..+.+++.+|++.||++|||++|+++
T Consensus 219 ~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 219 PDED--VWP-GVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred CChH--Hhh-hhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 1000 000 0000000000000000000 0111122356789999999999999999999985
No 335
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.7e-32 Score=298.86 Aligned_cols=243 Identities=22% Similarity=0.289 Sum_probs=184.9
Q ss_pred ceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhc---CCCCccceEEEEeecCCccccceEEEE
Q 001782 706 MIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRN---IRHRNLIKIITVCSSIDFEEVDFKAIV 779 (1013)
Q Consensus 706 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~---l~h~niv~~~~~~~~~~~~~~~~~~lv 779 (1013)
+||+|+||.||+|.+..+++.||+|.+..... .....+.+|..+++. .+||+|+.+++++. .++..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH-----TPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe-----cCCeEEEE
Confidence 48999999999999998899999999864322 112234455544443 47999999998853 44678999
Q ss_pred EeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccccc
Q 001782 780 YEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARF 859 (1013)
Q Consensus 780 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 859 (1013)
|||+++++|.+++... +.+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++..
T Consensus 76 ~e~~~~~~L~~~i~~~------~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 76 LDLMNGGDLHYHLSQH------GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EecCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 9999999999998765 4689999999999999999999999 999999999999999999999999999874
Q ss_pred CCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCCh
Q 001782 860 LPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPE 938 (1013)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~ 938 (1013)
.... ......|+..|+|||...+ ..++.++||||+||++|||++|..||........ ...
T Consensus 147 ~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~------- 207 (279)
T cd05633 147 FSKK----------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEI------- 207 (279)
T ss_pred cccc----------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--HHH-------
Confidence 4321 1123468999999999864 5688999999999999999999999975422111 000
Q ss_pred hHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-----CHHHHHHH
Q 001782 939 KVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-----QMTDVVAK 1000 (1013)
Q Consensus 939 ~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 1000 (1013)
.... ....+ . .....+..+.+++.+|++.||++|| |++|+++.
T Consensus 208 --~~~~---~~~~~----~----------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 208 --DRMT---LTVNV----E----------LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred --HHHh---hcCCc----C----------CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 0000 00000 0 0012345678899999999999999 58888764
No 336
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.7e-32 Score=295.35 Aligned_cols=251 Identities=20% Similarity=0.291 Sum_probs=193.6
Q ss_pred hhhhhhhhccCCCCCce--eeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcC-CCCccceEEEEeec
Q 001782 691 YADLSKATNDFSSSNMI--GQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNI-RHRNLIKIITVCSS 767 (1013)
Q Consensus 691 ~~~~~~~~~~y~~~~~l--g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 767 (1013)
..+.....++|++.+.+ |+|+||.||++....++..+|+|++....... .|+.....+ +||||+++++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~- 79 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVT- 79 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEe-
Confidence 34455556788888877 99999999999999999999999986432211 122222222 6999999999964
Q ss_pred CCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC
Q 001782 768 IDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM 847 (1013)
Q Consensus 768 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 847 (1013)
..+..++||||+++++|.+++... ..+++.++..++.|+++|++|||+. +++||||||+||+++.++
T Consensus 80 ----~~~~~~iv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~ 146 (267)
T PHA03390 80 ----TLKGHVLIMDYIKDGDLFDLLKKE------GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAK 146 (267)
T ss_pred ----cCCeeEEEEEcCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCC
Confidence 346899999999999999999765 3789999999999999999999999 999999999999999998
Q ss_pred -ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCc
Q 001782 848 -VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGL 926 (1013)
Q Consensus 848 -~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~ 926 (1013)
.++|+|||.++.... .....++..|+|||++.+..++.++||||+|+++|||++|+.||........
T Consensus 147 ~~~~l~dfg~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T PHA03390 147 DRIYLCDYGLCKIIGT------------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL 214 (267)
T ss_pred CeEEEecCccceecCC------------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh
Confidence 999999999875432 1223578999999999998999999999999999999999999975432221
Q ss_pred cHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCC-HHHHHH
Q 001782 927 TLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQ-MTDVVA 999 (1013)
Q Consensus 927 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~ 999 (1013)
....+.... . .. . .........+.+++.+|++.+|.+||+ ++|+++
T Consensus 215 ~~~~~~~~~---------~----~~----~----------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 215 DLESLLKRQ---------Q----KK----L----------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred hHHHHHHhh---------c----cc----C----------CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 111111000 0 00 0 001123456789999999999999996 588874
No 337
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.4e-32 Score=293.54 Aligned_cols=254 Identities=21% Similarity=0.292 Sum_probs=197.8
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-----ccchhHHHHHHHHHhcCCCCccceEEEEeecCCcccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-----RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 773 (1013)
.+|++.+.||+|+||.||+|++..++..||+|++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP---EE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC---CC
Confidence 47899999999999999999999899999999875321 12345788999999999999999999986432 23
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...+++|||+++++|.+++... ..+++..+.+++.|++.|++|||+. +++|+||||+||+++.++.++|+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~------~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAY------GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECc
Confidence 5688999999999999998764 4578899999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||.++....... .........++..|+|||++.+..++.++|||||||++|++++|+.||...... ...
T Consensus 150 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~-- 218 (264)
T cd06653 150 FGASKRIQTICM-----SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM----AAI-- 218 (264)
T ss_pred cccccccccccc-----cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH----HHH--
Confidence 999986532111 111123356889999999999888999999999999999999999999653111 110
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.... ... .++.. +....+.+.+++.+|+. +|.+||++.+++.
T Consensus 219 -------~~~~---~~~---~~~~~----------p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 219 -------FKIA---TQP---TKPML----------PDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred -------HHHH---cCC---CCCCC----------CcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0000 000 00000 01223557889999999 5799999998875
No 338
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.9e-32 Score=299.09 Aligned_cols=278 Identities=21% Similarity=0.291 Sum_probs=200.9
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|++++++++|||++++++++... .....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---GKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC---CCCcEEE
Confidence 677899999999999999999889999999998653 33345688999999999999999999997432 1378999
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
||||++ ++|.+++.... ..+++.+++.++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.+.
T Consensus 78 v~e~~~-~~l~~~~~~~~-----~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 78 VFEYMD-HDLTGLLDSPE-----VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred Eecccc-ccHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcccccee
Confidence 999998 58988886542 3689999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
....... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ............
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~~~~~ 220 (287)
T cd07840 149 PYTKRNS-------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFELCGS 220 (287)
T ss_pred eccCCCc-------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCC
Confidence 6543221 11223456788999998765 45789999999999999999999999753211 111111111110
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhH-HHHHH-HHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEI-AKIEE-CLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~-~~~~~-~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.....+. ..................... ..... ++..+.+++.+|++.+|.+||+++++++
T Consensus 221 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 221 PTDENWP-GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred Cchhhcc-ccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000 000000000000000001111 11112 2667899999999999999999999986
No 339
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.3e-32 Score=297.95 Aligned_cols=249 Identities=22% Similarity=0.329 Sum_probs=198.7
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+-|++.+.||+|+||.||+|.+..++..||+|+..... ....+.+.+|+.++++++||||+++++++. .+...+
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 78 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKLW 78 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-----eCCeEE
Confidence 35778899999999999999998889999999986432 233456889999999999999999999953 457889
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++.. ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 79 lv~e~~~~~~l~~~i~~-------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~ 148 (277)
T cd06641 79 IIMEYLGGGSALDLLEP-------GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA 148 (277)
T ss_pred EEEEeCCCCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccc
Confidence 99999999999999864 3578999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
..+.... .......++..|+|||++.+..++.++|||||||++|+|++|..||...... ..
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~------ 209 (277)
T cd06641 149 GQLTDTQ--------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-----KV------ 209 (277)
T ss_pred eecccch--------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-----HH------
Confidence 7553211 1122345788999999998888999999999999999999999998653111 00
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
...+... .++.. ....+..+.+++.+|++.+|.+||++.++++.
T Consensus 210 ---~~~~~~~------~~~~~----------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 210 ---LFLIPKN------NPPTL----------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ---HHHHhcC------CCCCC----------CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0000000 00000 01224557889999999999999999999984
No 340
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=4.2e-32 Score=297.84 Aligned_cols=278 Identities=22% Similarity=0.293 Sum_probs=200.3
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcC---CCCccceEEEEeecCCccccce
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNI---RHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
|++.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.+++++ +|||++++++++...+......
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6778999999999999999988899999999974322 2234566788777666 5999999999986553333445
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
.+++|||+. ++|.+++..... ..+++.+++.++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~----~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK----PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccC
Confidence 899999998 589998876532 3589999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
.+..+.... ......++..|+|||++.+..++.++|||||||++|||++|..||..... ......+....
T Consensus 153 ~~~~~~~~~---------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~ 222 (287)
T cd07838 153 LARIYSFEM---------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVI 222 (287)
T ss_pred cceeccCCc---------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHc
Confidence 987653221 12233578899999999999999999999999999999999999875322 11122222111
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.......+..... .+..... ............+....+.+++.+||+.||++||++.|++.
T Consensus 223 ~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 223 GLPSEEEWPRNVS--LPRSSFP-SYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCCChHhcCCCcc--cchhhcc-cccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 1100000000000 0000000 00000011112234567789999999999999999999975
No 341
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.5e-32 Score=308.57 Aligned_cols=284 Identities=22% Similarity=0.296 Sum_probs=199.7
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCC--------
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSID-------- 769 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 769 (1013)
..+|++.+.||.|+||.||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 468999999999999999999999999999999987665555677889999999999999999998764321
Q ss_pred -ccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEec-CCC
Q 001782 770 -FEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLD-HDM 847 (1013)
Q Consensus 770 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~ 847 (1013)
..+....++||||++ ++|.+++.. ..+++..++.++.||+.|++|||+. |++||||||+||+++ +++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~-------~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~ 152 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ-------GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDL 152 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCc
Confidence 112246789999998 689888764 3588999999999999999999999 999999999999997 456
Q ss_pred ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCc
Q 001782 848 VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGL 926 (1013)
Q Consensus 848 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~ 926 (1013)
.+|++|||.++........ ........++..|+|||++.+ ..++.++|||||||++|+|++|+.||........
T Consensus 153 ~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~ 227 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSH-----KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ 227 (342)
T ss_pred eEEECCcccceecCCcccc-----ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 7899999999765321111 111223457889999998654 4678899999999999999999999975322111
Q ss_pred cHHHHHHhhCChhHHHhhhhhhccchhhhh-ccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 927 TLHEFAKMALPEKVMEIVDPLLLLDLEARA-SNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 927 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~-~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
....... .+....+.........+..-. .......+...........+.+++.+|++.||.+|||+.|++.
T Consensus 228 -~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 228 -MQLILES-VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred -HHHHHHh-cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 1111110 000000000000000000000 0000000000111123456789999999999999999999984
No 342
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-34 Score=279.08 Aligned_cols=211 Identities=24% Similarity=0.422 Sum_probs=175.8
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec--cccchhHHHHHHHHHhcCCCCccceEEEEeecCCc---cc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK--QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDF---EE 772 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 772 (1013)
.+.|....+||+|.||.||+|+.+.+++.||+|++-.+ .........+|++++..++|+|++.+++.|....- .+
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 34667778999999999999999999999999876432 23334567899999999999999999999876432 23
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
....|+||++|+ .+|..++.... .+++..++.+++.++..||.|+|.. .|+|||+||.|||++.+|.+||+
T Consensus 96 r~t~ylVf~~ce-hDLaGlLsn~~-----vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklA 166 (376)
T KOG0669|consen 96 RATFYLVFDFCE-HDLAGLLSNRK-----VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLA 166 (376)
T ss_pred cceeeeeHHHhh-hhHHHHhcCcc-----ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEee
Confidence 345899999999 89999887653 4789999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
|||+|+.+...... .....+..+-|.+|++||.+.+. .|+++.|||+.||++.||++|.+-++..
T Consensus 167 DFGlar~fs~~~n~----~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgn 232 (376)
T KOG0669|consen 167 DFGLARAFSTSKNV----VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGN 232 (376)
T ss_pred ccccccceeccccc----CCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCC
Confidence 99999865432221 12234556679999999998875 6999999999999999999999988763
No 343
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2e-32 Score=304.11 Aligned_cols=289 Identities=21% Similarity=0.271 Sum_probs=201.6
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc--chhHHHHHHHHHhcCCCCccceEEEEeecCCc---cc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG--ATKSFVAECEALRNIRHRNLIKIITVCSSIDF---EE 772 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 772 (1013)
.++|++.++||+|+||.||+|++..+++.||+|++...... ....+.+|++++++++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 57899999999999999999999989999999998644322 23457889999999999999999988653321 23
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
....++||||++ +++.+.+.... ..+++.++..++.|+++||+|||++ +++||||||+||++++++.+||+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~ 157 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENPS-----VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIA 157 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEC
Confidence 456799999998 57777766432 4689999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCcccc---CCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccH
Q 001782 853 DFGLARFLPPCSPATILE---TPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTL 928 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~ 928 (1013)
|||+++............ .........+++.|+|||++.+. .++.++|||||||++|||++|+.||...... ...
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~ 236 (311)
T cd07866 158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQL 236 (311)
T ss_pred cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHH
Confidence 999998654332211100 11122345678899999987654 5789999999999999999999999753221 111
Q ss_pred HHHHHhhC-C-hhHHHhhhhhhccchhhhhccCCCCchh-HHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 929 HEFAKMAL-P-EKVMEIVDPLLLLDLEARASNCGSHRTE-IAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 929 ~~~~~~~~-~-~~~~~~i~~~l~~~~~~R~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
........ + +......+. +......+ ........ ..........+.+++.+|++.||++|||+.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRS-LPGCEGVH--SFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHHhCCCChhhchhhhh-cccccccc--cCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 11111100 0 000000000 00000000 00000000 0111223356789999999999999999999875
No 344
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.5e-33 Score=325.02 Aligned_cols=283 Identities=19% Similarity=0.212 Sum_probs=189.5
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCC-eEEEEEEEe-----------------eccccchhHHHHHHHHHhcCCCCcc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENE-MAVAVKVMN-----------------LKQRGATKSFVAECEALRNIRHRNL 758 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~-----------------~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1013)
..++|++.++||+|+||+||+|..+... ..++.|.+. .........+.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3568999999999999999998764322 122222110 0111223457899999999999999
Q ss_pred ceEEEEeecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCC
Q 001782 759 IKIITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKP 838 (1013)
Q Consensus 759 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp 838 (1013)
+++++++. ..+..++|+|++. +++.+++........ ......++..|+.|++.||+|||++ +||||||||
T Consensus 226 v~l~~~~~-----~~~~~~lv~e~~~-~~l~~~l~~~~~~~~-~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP 295 (501)
T PHA03210 226 LKIEEILR-----SEANTYMITQKYD-FDLYSFMYDEAFDWK-DRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKL 295 (501)
T ss_pred CcEeEEEE-----ECCeeEEEEeccc-cCHHHHHhhcccccc-ccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence 99999964 4467899999987 678877754322111 2344667889999999999999999 999999999
Q ss_pred CceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCC-
Q 001782 839 SNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRP- 917 (1013)
Q Consensus 839 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~p- 917 (1013)
+|||++.++.+||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|..+
T Consensus 296 ~NILl~~~~~vkL~DFGla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 296 ENIFLNCDGKIVLGDFGTAMPFEKERE-------AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred HHEEECCCCCEEEEeCCCceecCcccc-------cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999986543211 112346799999999999999999999999999999999998754
Q ss_pred CCCcCCC-CccHHHHHHh------hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCC
Q 001782 918 TDNMFND-GLTLHEFAKM------ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSE 990 (1013)
Q Consensus 918 f~~~~~~-~~~~~~~~~~------~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~ 990 (1013)
|...... ...+...... .+++...++.+..........+. .....-.....+..+.+++.+|++.||++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~kmL~~DP~~ 444 (501)
T PHA03210 369 IGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGH----SVPPLIRNLGLPADFEYPLVKMLTFDWHL 444 (501)
T ss_pred ccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCcc----chhhHHHhcCCChHHHHHHHHHhccCccc
Confidence 4322111 1111111111 11111111111100000000000 00000011112345678899999999999
Q ss_pred CCCHHHHHHH
Q 001782 991 RIQMTDVVAK 1000 (1013)
Q Consensus 991 RPs~~evl~~ 1000 (1013)
|||+.|+++.
T Consensus 445 Rpsa~elL~h 454 (501)
T PHA03210 445 RPGAAELLAL 454 (501)
T ss_pred CcCHHHHhhC
Confidence 9999999863
No 345
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.7e-32 Score=307.23 Aligned_cols=282 Identities=21% Similarity=0.252 Sum_probs=205.8
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.++||+|++|.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++...........+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5889999999999999999998889999999987433 33456789999999999999999999987544323335789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||++ ++|.+++... ..+++..++.++.|++.|++|||++ ||+||||||+||+++.++.++|+|||.+
T Consensus 81 lv~e~~~-~~l~~~l~~~------~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 81 IVTELME-TDLHKVIKSP------QPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred EEecchh-hhHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 9999998 6899988764 4789999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
......... ........++..|+|||++.+. .++.++||||+|+++|+|++|+.||....... ..........
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~ 224 (330)
T cd07834 151 RGVDPDEDE-----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID-QLNLIVEVLG 224 (330)
T ss_pred Eeecccccc-----cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHhcC
Confidence 865432210 1112344678899999999887 78999999999999999999999997643211 1111111100
Q ss_pred --ChhHHHhhhhhhccchhhhhccCC-CC-chhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 937 --PEKVMEIVDPLLLLDLEARASNCG-SH-RTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 937 --~~~~~~~i~~~l~~~~~~R~~~~~-~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
++.......... ......... .. ..........+..+.+++.+||+.+|.+||++.+++..
T Consensus 225 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 225 TPSEEDLKFITSEK---ARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred CCChhHhhhccccc---hhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000000000000 000000000 00 00000112245678899999999999999999999874
No 346
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3.8e-32 Score=300.51 Aligned_cols=284 Identities=21% Similarity=0.312 Sum_probs=201.7
Q ss_pred hhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCC----
Q 001782 696 KATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSID---- 769 (1013)
Q Consensus 696 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 769 (1013)
...++|++.++||+|+||.||+|.+..+++.||+|+++.... .....+.+|++++++++||||+++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 356789999999999999999999998899999999975432 23356778999999999999999999875432
Q ss_pred -ccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCc
Q 001782 770 -FEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMV 848 (1013)
Q Consensus 770 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 848 (1013)
..+....++|+||+++ ++.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL-----VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCc
Confidence 1123478999999984 7777776542 3689999999999999999999999 9999999999999999999
Q ss_pred eEEccccccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCcc
Q 001782 849 AHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLT 927 (1013)
Q Consensus 849 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~ 927 (1013)
+||+|||.+........ .......++..|+|||++.+ ..++.++||||+||++|||++|+.||..... ...
T Consensus 155 ~kl~dfg~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~ 226 (302)
T cd07864 155 IKLADFGLARLYNSEES-------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQ 226 (302)
T ss_pred EEeCcccccccccCCcc-------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHH
Confidence 99999999986543221 01122345788999998765 3578899999999999999999999975311 111
Q ss_pred HHHHHHhhC---ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 928 LHEFAKMAL---PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 928 ~~~~~~~~~---~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
......... +....++...........+... .+.-.......+..+.+++.+||+.||.+||+++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 227 LELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQY---RRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHHHhCCCChhhccccccccccccccccccc---ccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111100 0000000000000000000000 00000111223567899999999999999999999975
No 347
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.3e-32 Score=301.64 Aligned_cols=248 Identities=22% Similarity=0.318 Sum_probs=196.1
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEE
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
|....+||+|+||.||+|....++..||+|++..........+.+|+.+++.++|+|++++++++. ..+..++||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~ 96 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWVVM 96 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEE-----eCCEEEEEE
Confidence 333468999999999999999899999999986544445567889999999999999999999854 457899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++++|.+++.. ..+++..+..++.|++.|++|||+. |++||||+|+||++++++.++|+|||.+...
T Consensus 97 e~~~~~~L~~~~~~-------~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~ 166 (292)
T cd06657 97 EFLEGGALTDIVTH-------TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 166 (292)
T ss_pred ecCCCCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceec
Confidence 99999999998754 3578899999999999999999999 9999999999999999999999999988754
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhH
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKV 940 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~ 940 (1013)
.... .......|+..|+|||++.+..++.++||||+|+++|+|++|..||...... ...
T Consensus 167 ~~~~--------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~----------- 225 (292)
T cd06657 167 SKEV--------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAM----------- 225 (292)
T ss_pred cccc--------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHH-----------
Confidence 3211 1123346789999999998888999999999999999999999998642110 000
Q ss_pred HHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 941 MEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 941 ~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..+...+.. ........+..+.+++.+||+.+|.+||++.++++
T Consensus 226 -~~~~~~~~~--------------~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 226 -KMIRDNLPP--------------KLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred -HHHHhhCCc--------------ccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 001000000 00001122345678899999999999999999987
No 348
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.5e-32 Score=292.14 Aligned_cols=250 Identities=25% Similarity=0.359 Sum_probs=202.0
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIV 779 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 779 (1013)
+|+..+.||+|++|.||+|.+..+++.|++|++........+.+.+|++++++++||+++++++++. .....+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL-----KKDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeEEEE
Confidence 4788899999999999999998889999999997655445678999999999999999999999854 34778999
Q ss_pred EeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccccc
Q 001782 780 YEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARF 859 (1013)
Q Consensus 780 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 859 (1013)
+||+++++|.+++.... ..+++.++..++.|++.|+++||+. +++||||+|+||++++++.++|+|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 147 (253)
T cd05122 76 MEFCSGGSLKDLLKSTN-----QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQ 147 (253)
T ss_pred EecCCCCcHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccc
Confidence 99999999999987653 3689999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChh
Q 001782 860 LPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEK 939 (1013)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~ 939 (1013)
...... .....++..|+|||++.+..++.++||||||+++|+|++|+.||....... ..
T Consensus 148 ~~~~~~---------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~-------- 206 (253)
T cd05122 148 LSDTKA---------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK----AL-------- 206 (253)
T ss_pred cccccc---------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH----HH--------
Confidence 543211 234567889999999998889999999999999999999999987532110 00
Q ss_pred HHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 940 VMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 940 ~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..... .... ........+..+.+++.+|++.||++|||+.|+++
T Consensus 207 --~~~~~---~~~~-----------~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 207 --FKIAT---NGPP-----------GLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred --HHHHh---cCCC-----------CcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000 0000 00000112356788999999999999999999985
No 349
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3.8e-32 Score=305.29 Aligned_cols=282 Identities=22% Similarity=0.262 Sum_probs=199.5
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCC-ccccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSID-FEEVD 774 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 774 (1013)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ......+.+|+.++++++||||+++++++.... .....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 368999999999999999999998889999999986432 222356789999999999999999999875432 12234
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..++|+||+. .++.++.. ..+++.++..++.|++.|++|||++ +++||||||+||+++.++.+||+||
T Consensus 94 ~~~lv~e~~~-~~l~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~df 161 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG--------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDF 161 (342)
T ss_pred eEEEEecccc-cCHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeC
Confidence 5799999997 57776652 2578899999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
|+++.... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .......
T Consensus 162 g~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~ 229 (342)
T cd07879 162 GLARHADA-----------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILK 229 (342)
T ss_pred CCCcCCCC-----------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 99875321 1223467889999999876 468899999999999999999999997532111 1111111
Q ss_pred h-hC-ChhHHHhhhhhhccchhhhhccCCCCchhHH-HHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH--HHHhh
Q 001782 934 M-AL-PEKVMEIVDPLLLLDLEARASNCGSHRTEIA-KIEECLVAIVRIGVLCSMESPSERIQMTDVVAK--LCSAR 1005 (1013)
Q Consensus 934 ~-~~-~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~~~ 1005 (1013)
. .. ++...+.+............... .+.... ........+.+++.+||+.||.+||+++|++.. ++..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 230 VTGVPGPEFVQKLEDKAAKSYIKSLPKY--PRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred hcCCCCHHHHHHhcccchHHHHhhcCCc--ccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 0 00 11111111100000000000000 000000 011234567899999999999999999999854 55443
No 350
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=4.1e-32 Score=298.84 Aligned_cols=277 Identities=23% Similarity=0.307 Sum_probs=196.0
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
++|++.+.||+|++|+||+|++..+++.||+|.+..... ...+.+.+|++++++++||||+++++++. .....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH-----SEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe-----cCCeE
Confidence 578999999999999999999998999999999864322 23356889999999999999999999964 45789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC-CCceEEcccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH-DMVAHVGDFG 855 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG 855 (1013)
++||||++ +++.+++..... ..+++..+..++.||+.||+|||++ +++||||+|+||+++. ++.+||+|||
T Consensus 77 ~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSSPD----FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred EEEEeccc-ccHHHHHHhCCC----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccc
Confidence 99999997 688888765422 3467888899999999999999999 9999999999999985 5679999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
++....... .......+++.|+|||++.+. .++.++||||+||++|+|++|+.||......+.. ......
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~-~~~~~~ 219 (294)
T PLN00009 149 LARAFGIPV--------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDEL-FKIFRI 219 (294)
T ss_pred cccccCCCc--------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHH
Confidence 997543211 112234578899999988664 5788999999999999999999999753221111 111000
Q ss_pred hCChhHHHhhhhhh-ccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 ALPEKVMEIVDPLL-LLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l-~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
. ............ ..+.......... .............+.+++.+|++.+|++||++.++++
T Consensus 220 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 220 L-GTPNEETWPGVTSLPDYKSAFPKWPP-KDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred h-CCCChhhccccccchhhhhhcccCCC-CCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 000000000000 0000000000000 0000011122445788999999999999999999986
No 351
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.5e-32 Score=301.46 Aligned_cols=259 Identities=22% Similarity=0.267 Sum_probs=192.9
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCC-CCccceEEEEeecCCccccceE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIR-HRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
++|+..+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+.++.++. ||||+++++++. .+...
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~-----~~~~~ 78 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF-----REGDC 78 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe-----cCCcE
Confidence 356667899999999999999999999999999874332 33456889999999996 999999999864 34678
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
+++|||+. +++.++....... ....+++..+..++.|++.|++|||+.. +++||||||+||+++.++.+||+|||+
T Consensus 79 ~~~~e~~~-~~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~ 154 (288)
T cd06616 79 WICMELMD-ISLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGI 154 (288)
T ss_pred EEEEeccc-CCHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecch
Confidence 89999987 5665544321100 1146899999999999999999999732 899999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCC---CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG---DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
++.+.... ......|+..|+|||++.+. .++.++||||+||++|||++|+.||..... ....
T Consensus 155 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~--- 219 (288)
T cd06616 155 SGQLVDSI---------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS---VFDQ--- 219 (288)
T ss_pred hHHhccCC---------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch---HHHH---
Confidence 87543211 12234578899999998876 688999999999999999999999865310 0000
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
..+. ....+...+ . ......+..+.+++.+||+.||++|||++||++.
T Consensus 220 ------~~~~----~~~~~~~~~---~------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 220 ------LTQV----VKGDPPILS---N------SEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred ------Hhhh----cCCCCCcCC---C------cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0010 000000000 0 0001234568899999999999999999999874
No 352
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=4.7e-32 Score=302.25 Aligned_cols=280 Identities=21% Similarity=0.257 Sum_probs=201.8
Q ss_pred hhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCc
Q 001782 693 DLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDF 770 (1013)
Q Consensus 693 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 770 (1013)
++....++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++.+++..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--- 80 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS--- 80 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec---
Confidence 34456789999999999999999999999999999999875322 2234668899999999999999999998632
Q ss_pred cccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceE
Q 001782 771 EEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAH 850 (1013)
Q Consensus 771 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 850 (1013)
.....++||||+. ++|.++++.. .+++..+..++.|++.|++|||+. +|+||||+|+||++++++.+|
T Consensus 81 -~~~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~ 148 (328)
T cd07856 81 -PLEDIYFVTELLG-TDLHRLLTSR-------PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLK 148 (328)
T ss_pred -CCCcEEEEeehhc-cCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEE
Confidence 2356889999985 7898888643 578888899999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHH
Q 001782 851 VGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLH 929 (1013)
Q Consensus 851 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~ 929 (1013)
|+|||.+..... ......++..|+|||++.+ ..++.++|||||||++|+|++|+.||...... ....
T Consensus 149 l~dfg~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~-~~~~ 216 (328)
T cd07856 149 ICDFGLARIQDP-----------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV-NQFS 216 (328)
T ss_pred eCccccccccCC-----------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHH
Confidence 999999874321 1223457889999998766 56899999999999999999999999653211 0111
Q ss_pred HHHHhhCChhHHHhhhhhhccchhhhhccCCC--CchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 930 EFAKMALPEKVMEIVDPLLLLDLEARASNCGS--HRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 930 ~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.... .......++.......+..+....... ..+...........+.+++.+|++.+|++||+++|++..
T Consensus 217 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 217 IITD-LLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHH-HhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1111 000001111111111110000000000 000001111234678899999999999999999999764
No 353
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.6e-32 Score=301.53 Aligned_cols=276 Identities=18% Similarity=0.203 Sum_probs=190.2
Q ss_pred cceEEEEEEECCCCeEEEEEEEeec--cccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeeccCCCH
Q 001782 711 SFGFVYRGNLGENEMAVAVKVMNLK--QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYMECGSL 788 (1013)
Q Consensus 711 ~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL 788 (1013)
++|.||.++...+++.||+|++... .....+.+.+|++++++++||||+++++++ ...+..+++|||+++++|
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~-----~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSF-----IVDSELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhhee-----ecCCeEEEEEeccCCCCH
Confidence 4455666666668999999999754 233456799999999999999999999985 345778999999999999
Q ss_pred HHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCCCCCcc
Q 001782 789 EDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATI 868 (1013)
Q Consensus 789 ~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 868 (1013)
.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+..+........
T Consensus 87 ~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 87 EDLLKTHFP----EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred HHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 999986532 3588999999999999999999999 999999999999999999999999998875533221110
Q ss_pred ccCCCCCcccccccccccccccCCC--CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHhhhh
Q 001782 869 LETPSSSTGIKGTVGYVAPEYGMGG--DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDP 946 (1013)
Q Consensus 869 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 946 (1013)
..........++..|+|||++.+. .++.++|||||||++|||++|+.||............ .....+........+
T Consensus 160 -~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 237 (314)
T cd08216 160 -VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEK-VRGTVPCLLDKSTYP 237 (314)
T ss_pred -ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhccCccccccCchh
Confidence 111112344577899999998763 5888999999999999999999999764222111111 110010000000000
Q ss_pred hhccchhhh----hccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 947 LLLLDLEAR----ASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 947 ~l~~~~~~R----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
......... ....................+.+++.+||+.||++|||++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 238 LYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred hhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000000000 000000001111112334568899999999999999999999863
No 354
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=6.7e-32 Score=291.08 Aligned_cols=252 Identities=24% Similarity=0.410 Sum_probs=202.7
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.+.||+|+||.||+|.+..++..||+|++..... ...+.+.+|+++++.++|||++++.+.+. .....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-----~~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE-----EKGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe-----cCCEEE
Confidence 57888999999999999999998899999999975533 34567889999999999999999999854 347889
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+|+||+++++|.+++..... ....+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~ 150 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKK--EGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGIS 150 (258)
T ss_pred EEEEecCCCcHHHHHHHhhc--cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccce
Confidence 99999999999999987532 125789999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
....... .......|++.|+|||...+..++.++||||+|+++|+|++|+.||..... ....
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~----- 212 (258)
T cd08215 151 KVLSSTV--------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-----LELA----- 212 (258)
T ss_pred eecccCc--------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-----HHHH-----
Confidence 7654321 112334688899999999888899999999999999999999999865321 1110
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
...... .+..-+ ...+..+.+++.+||..+|++|||+.|+++
T Consensus 213 ---~~~~~~----~~~~~~-------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 213 ---LKILKG----QYPPIP-------------SQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred ---HHHhcC----CCCCCC-------------CCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 011110 000000 022356788999999999999999999986
No 355
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.9e-32 Score=295.27 Aligned_cols=251 Identities=23% Similarity=0.357 Sum_probs=198.5
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.+.||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+++++.++|+||+++++.+ ......+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASF-----QENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhhee-----ccCCeEE
Confidence 5788899999999999999999899999999987532 12345688999999999999999999985 3457899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC-ceEEccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM-VAHVGDFGL 856 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~ 856 (1013)
+|+||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||||+||++++++ .+|++|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQRG----VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred EEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEeccccc
Confidence 99999999999999976432 3578999999999999999999999 999999999999999885 569999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+........ ......|++.|+|||+..+..++.++|+||||+++|||++|..||..... .....
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~--- 212 (257)
T cd08225 149 ARQLNDSME--------LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-----HQLVL--- 212 (257)
T ss_pred chhccCCcc--------cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHH---
Confidence 876532211 12234588999999999888899999999999999999999999864311 11111
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.......... . ...+..+.+++.+|+..+|++|||+.|+++.
T Consensus 213 -----~~~~~~~~~~-------~----------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 213 -----KICQGYFAPI-------S----------PNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred -----HHhcccCCCC-------C----------CCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1110000000 0 0123457889999999999999999999863
No 356
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=5.8e-32 Score=300.68 Aligned_cols=247 Identities=25% Similarity=0.350 Sum_probs=194.0
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.|...+.||+|+||.||+|++..++..||+|++..... .....+.+|++++++++|||++++++++. .+...
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~ 100 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL-----REHTA 100 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-----eCCeE
Confidence 47788999999999999999988899999999864322 22356888999999999999999999964 34678
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+. |++.+++.... ..+++.++..++.|++.|+.|||++ +|+||||+|+||+++.++.+||+|||+
T Consensus 101 ~lv~e~~~-g~l~~~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~ 171 (317)
T cd06635 101 WLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGS 171 (317)
T ss_pred EEEEeCCC-CCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCC
Confidence 99999998 68887775432 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM---GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
+..... .....|+..|+|||++. .+.++.++|||||||++|||++|+.||...... ..
T Consensus 172 ~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~--- 232 (317)
T cd06635 172 ASIASP------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SA--- 232 (317)
T ss_pred ccccCC------------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH----HH---
Confidence 864322 12345788999999974 456889999999999999999999998653111 00
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
...+..... + .. .....+..+.+++.+|++.+|.+||++.++++..
T Consensus 233 ------~~~~~~~~~---~----~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 233 ------LYHIAQNES---P----TL---------QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred ------HHHHHhccC---C----CC---------CCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 001110000 0 00 0012234578899999999999999999999864
No 357
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=5.7e-32 Score=291.86 Aligned_cols=254 Identities=24% Similarity=0.362 Sum_probs=202.9
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|+..+.||+|++|.||+|.+..+++.|++|++..... ...+.+.+|++++++++||||+++++.+... .....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE---EKNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC---CCCeEE
Confidence 47788999999999999999998899999999875542 3456789999999999999999999986422 136789
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+|+||+++++|.+++... ..+++.+++.++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+
T Consensus 78 lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKF------GKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred EEEEecCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccE
Confidence 999999999999999865 3789999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
......... .......++..|+|||...+...+.++||||||+++|+|++|..||..... .....
T Consensus 149 ~~~~~~~~~------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~------ 213 (260)
T cd06606 149 KRLGDIETG------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN---PMAAL------ 213 (260)
T ss_pred Eeccccccc------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---hHHHH------
Confidence 866432211 012345688999999999888899999999999999999999999976431 00000
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..... ....+. .....+..+.+++.+|+..+|++||++.|++.
T Consensus 214 ---~~~~~------~~~~~~----------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 214 ---YKIGS------SGEPPE----------IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ---Hhccc------cCCCcC----------CCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 00000 000000 00122456889999999999999999999985
No 358
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.5e-32 Score=297.45 Aligned_cols=253 Identities=23% Similarity=0.329 Sum_probs=195.2
Q ss_pred eeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeec
Q 001782 707 IGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYM 783 (1013)
Q Consensus 707 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 783 (1013)
||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++.+ ..+...+++|||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEecC
Confidence 6899999999999998899999999864433 3446788999999999999999999874 4557899999999
Q ss_pred cCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCC
Q 001782 784 ECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPC 863 (1013)
Q Consensus 784 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 863 (1013)
++++|.+++... +.+++.++..++.|++.||+|||+. +++||||+|+||++++++.+||+|||++......
T Consensus 76 ~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 76 PGGDLASLLENV------GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred CCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 999999999865 4689999999999999999999999 9999999999999999999999999998754322
Q ss_pred CCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHh
Q 001782 864 SPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEI 943 (1013)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1013)
................++..|+|||......++.++||||||+++|++++|..||...... +.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----------------~~ 209 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-----------------EI 209 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----------------HH
Confidence 1111001111233456788999999998888999999999999999999999999653211 00
Q ss_pred hhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 944 VDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 944 i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
......... ..+ .....+..+.+++.+|++.+|++|||+.++.+.|+
T Consensus 210 ~~~~~~~~~-~~~-----------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 210 FQNILNGKI-EWP-----------EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred HHHHhcCCc-CCC-----------ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 111100000 000 00012456789999999999999999966555443
No 359
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-33 Score=288.42 Aligned_cols=276 Identities=24% Similarity=0.310 Sum_probs=205.9
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCC-C-C----ccceEEEEeecCCcc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIR-H-R----NLIKIITVCSSIDFE 771 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~~~~~~~~~~~~ 771 (1013)
.++|.+...+|+|.||.|-.+.+.+++..||+|+++... ...+..+-|+++++++. + | -++++.++ ++
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~w-----Fd 161 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDW-----FD 161 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehh-----hh
Confidence 789999999999999999999999999999999997432 23355678999999993 2 2 35666666 56
Q ss_pred ccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC------
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH------ 845 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~------ 845 (1013)
..++.|+|+|.+. .|+.+++..+.. .+++...+..++.|++++++|||+. +++|.|+||+||++..
T Consensus 162 yrghiCivfellG-~S~~dFlk~N~y----~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 162 YRGHICIVFELLG-LSTFDFLKENNY----IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred ccCceEEEEeccC-hhHHHHhccCCc----cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEE
Confidence 7799999999986 799999998755 5899999999999999999999999 9999999999999932
Q ss_pred --------------CCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHH
Q 001782 846 --------------DMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEM 911 (1013)
Q Consensus 846 --------------~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~el 911 (1013)
...+|++|||.|.+-.+. ....+.|..|+|||++.+-.++.++||||+|||++|+
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~-----------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~El 302 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH-----------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVEL 302 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccC-----------cceeeeccccCCchheeccCcCCccCceeeeeEEEEe
Confidence 235899999999853221 2456789999999999999999999999999999999
Q ss_pred HhCCCCCCCcCCCC-ccHHHHHHhhCChhHH------Hhhhhhhccchhhhhcc---------CCCCchhHHHHHHHHHH
Q 001782 912 FTRRRPTDNMFNDG-LTLHEFAKMALPEKVM------EIVDPLLLLDLEARASN---------CGSHRTEIAKIEECLVA 975 (1013)
Q Consensus 912 l~G~~pf~~~~~~~-~~~~~~~~~~~~~~~~------~~i~~~l~~~~~~R~~~---------~~~~~~~~~~~~~~~~~ 975 (1013)
++|...|+...+.+ ....+.+-...|..+. ...... ..|+.+-.+. |............+...
T Consensus 303 ytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~-rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~ 381 (415)
T KOG0671|consen 303 YTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRG-RLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQ 381 (415)
T ss_pred eccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcc-cccCccccccccchhhhcCCccHHHHhccCcHHHhH
Confidence 99999998754221 1112222222332211 111111 1221111110 11111111122455677
Q ss_pred HHHHhhhcccCCCCCCCCHHHHHH
Q 001782 976 IVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 976 l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+.+|+++|+..||.+|+|+.|++.
T Consensus 382 LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 382 LFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHHHHHccCccccccHHHHhc
Confidence 999999999999999999999975
No 360
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=5e-32 Score=295.37 Aligned_cols=245 Identities=24% Similarity=0.300 Sum_probs=190.9
Q ss_pred eeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeec
Q 001782 707 IGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYM 783 (1013)
Q Consensus 707 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 783 (1013)
||+|+||+||+|.+..+++.||+|++.... ......+.+|++++++++||||+++++++ ...+..|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF-----ETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE-----ecCCeEEEEEecC
Confidence 689999999999999899999999986432 22334567899999999999999999985 3457889999999
Q ss_pred cCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCC
Q 001782 784 ECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPC 863 (1013)
Q Consensus 784 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 863 (1013)
++++|.+++..... ..+++.++..++.|++.|+.|||+. +++||||+|+||++++++.+||+|||.+......
T Consensus 76 ~~~~L~~~l~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 76 NGGDLKYHIYNVGE----PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred CCCcHHHHHHHcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 99999999976532 3689999999999999999999999 9999999999999999999999999998754321
Q ss_pred CCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHh
Q 001782 864 SPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEI 943 (1013)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1013)
.......++..|+|||++.+..++.++||||+||++|+|++|+.||....... ..... ..
T Consensus 149 ---------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~---------~~- 208 (277)
T cd05577 149 ---------KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEEL---------KR- 208 (277)
T ss_pred ---------CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHH---------Hh-
Confidence 11223457889999999988889999999999999999999999997532211 00000 00
Q ss_pred hhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-----CHHHHHH
Q 001782 944 VDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-----QMTDVVA 999 (1013)
Q Consensus 944 i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 999 (1013)
.... .+.. ........+.+++.+||+.||.+|| ++.+++.
T Consensus 209 --~~~~-~~~~-------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 209 --RTLE-MAVE-------------YPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred --cccc-cccc-------------CCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 0000 0000 0011244578899999999999999 6666654
No 361
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=3.2e-32 Score=294.43 Aligned_cols=243 Identities=27% Similarity=0.356 Sum_probs=193.0
Q ss_pred eeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeec
Q 001782 707 IGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYM 783 (1013)
Q Consensus 707 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 783 (1013)
||.|++|.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++. ++...++||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK-----DKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE-----cCCccEEEEecC
Confidence 689999999999999889999999987432 233467899999999999999999999853 457899999999
Q ss_pred cCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCC
Q 001782 784 ECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPC 863 (1013)
Q Consensus 784 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 863 (1013)
++++|.+++... ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+......
T Consensus 76 ~~~~L~~~l~~~------~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 76 LGGELWTILRDR------GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred CCCcHHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 999999999765 3588999999999999999999999 9999999999999999999999999999865332
Q ss_pred CCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHh
Q 001782 864 SPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEI 943 (1013)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1013)
. ......++..|+|||++.+..++.++|+||+|+++|+|++|..||.....+. ... ...+
T Consensus 147 ~---------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~--------~~~~ 206 (262)
T cd05572 147 Q---------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEI--------YNDI 206 (262)
T ss_pred c---------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHH--------HHHH
Confidence 1 1223467889999999988889999999999999999999999997642210 000 0111
Q ss_pred hhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCC-----HHHHHH
Q 001782 944 VDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQ-----MTDVVA 999 (1013)
Q Consensus 944 i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 999 (1013)
.+.. .++.. ....+..+.+++.+||+.+|++||+ ++|+++
T Consensus 207 ~~~~------~~~~~----------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 207 LKGN------GKLEF----------PNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred hccC------CCCCC----------CcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 1000 00000 0111456889999999999999999 666655
No 362
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=7e-32 Score=302.11 Aligned_cols=283 Identities=19% Similarity=0.230 Sum_probs=198.5
Q ss_pred cCCCCCceeeccceEEEEEEECCC--CeEEEEEEEeecc--ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGEN--EMAVAVKVMNLKQ--RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 774 (1013)
+|++.+.||+|+||.||+|++..+ +..||+|++.... ....+.+.+|+++++++ +||||+++++.+... .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVF-PGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeec-cccCC
Confidence 478889999999999999999877 8899999986322 22345678899999999 599999999975432 12335
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..++++||++ ++|.+++... ..+++.+++.++.|++.||+|||++ |++||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSG------QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcC
Confidence 6789999987 7899988754 4689999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
|.++.+...... .........|+..|+|||+..+ ..++.++||||+||++|+|++|+.||...... ........
T Consensus 150 g~a~~~~~~~~~----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~ 224 (332)
T cd07857 150 GLARGFSENPGE----NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQ 224 (332)
T ss_pred CCceeccccccc----ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHH
Confidence 999865432211 1112334578999999998765 46899999999999999999999998753211 11111111
Q ss_pred hhCChhHHHhhhhhhccchhhhhc-cCCCCchhHHH-HHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARAS-NCGSHRTEIAK-IEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~-~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.... ...+.+............. ........... .......+.+++.+|++.||++|||+.|+++
T Consensus 225 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 225 VLGT-PDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HhCC-CCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1100 0001111000000000000 00000000000 0112456889999999999999999999864
No 363
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.98 E-value=7.3e-32 Score=302.95 Aligned_cols=278 Identities=21% Similarity=0.252 Sum_probs=200.8
Q ss_pred hhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCc-cc
Q 001782 696 KATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDF-EE 772 (1013)
Q Consensus 696 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~ 772 (1013)
...++|++.+.||+|+||.||+|.+..++..||||++.... ....+.+.+|++++++++||||+++++++..... ..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 34678999999999999999999999899999999985332 2223567899999999999999999998753211 12
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
....++||||+ +++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~-------~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~ 160 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKH-------EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKIL 160 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEe
Confidence 23568999999 5899988864 3688999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHH
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEF 931 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~ 931 (1013)
|||++..... ......+++.|+|||++.+ ..++.++||||+||++|++++|+.||...... ......
T Consensus 161 dfg~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~ 228 (343)
T cd07880 161 DFGLARQTDS-----------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEI 228 (343)
T ss_pred eccccccccc-----------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH
Confidence 9999875421 1223457889999999876 45888999999999999999999999753211 111111
Q ss_pred HHhh--CChhHHHhhhhhhccchhhhhccC-CCCchhHH-HHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 932 AKMA--LPEKVMEIVDPLLLLDLEARASNC-GSHRTEIA-KIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 932 ~~~~--~~~~~~~~i~~~l~~~~~~R~~~~-~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.... .+..+.+.+.. .+........ ........ ........+.+++.+|++.||++|||+.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 229 MKVTGTPSKEFVQKLQS---EDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHhcCCCCHHHHHhhcc---hhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1111 11111111110 0000000000 00001111 11234456889999999999999999999984
No 364
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.98 E-value=7.2e-32 Score=303.23 Aligned_cols=285 Identities=20% Similarity=0.240 Sum_probs=202.4
Q ss_pred hhhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCC
Q 001782 692 ADLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSID 769 (1013)
Q Consensus 692 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 769 (1013)
.++....++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++....
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 455567789999999999999999999998899999999986432 222456788999999999999999999875432
Q ss_pred -ccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCc
Q 001782 770 -FEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMV 848 (1013)
Q Consensus 770 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 848 (1013)
+......+++++++ +++|.++++. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKC-------QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCC
Confidence 12334578888887 5899888864 3588999999999999999999999 9999999999999999999
Q ss_pred eEEccccccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCcc
Q 001782 849 AHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLT 927 (1013)
Q Consensus 849 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~ 927 (1013)
+||+|||+++.... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... ..
T Consensus 159 ~kl~dfg~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~ 226 (345)
T cd07877 159 LKILDFGLARHTDD-----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQ 226 (345)
T ss_pred EEEecccccccccc-----------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HH
Confidence 99999999874321 1233467889999998766 46888999999999999999999999653211 11
Q ss_pred HHHHHHhh--CChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 928 LHEFAKMA--LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 928 ~~~~~~~~--~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
........ .++.....+.................. ............+.+++.+|++.||.+||++.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 227 LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM-NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCc-chhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 11111111 011111000000000000000000000 0000001124467899999999999999999998864
No 365
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.98 E-value=7.5e-32 Score=290.06 Aligned_cols=248 Identities=28% Similarity=0.432 Sum_probs=200.7
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.+.||+|++|.||+|++..+++.|++|.+..... ...+.+.+|++++++++||+++++++++. .....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-----TSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-----eCCEEE
Confidence 57889999999999999999988899999999975543 34567899999999999999999999864 347889
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
++|||+++++|.+++... ..+++..+..++.|++.|+.|||+. |++||||+|+||+++.++.+||+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~------~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 76 IILEYAENGSLRQIIKKF------GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred EEEecCCCCcHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccc
Confidence 999999999999999765 4689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
........ ......++..|+|||...+..++.++||||+|+++|+|++|+.||..... ......
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~---- 210 (254)
T cd06627 147 TKLNDVSK--------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFR---- 210 (254)
T ss_pred eecCCCcc--------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHH----
Confidence 86543221 12334678899999998888889999999999999999999999865321 010000
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
... ..++.. ....+..+.+++.+|+..+|++||++.|++.
T Consensus 211 -----~~~-------~~~~~~----------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 211 -----IVQ-------DDHPPL----------PEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -----Hhc-------cCCCCC----------CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 000 000000 0112346788999999999999999999874
No 366
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.98 E-value=1e-31 Score=294.02 Aligned_cols=272 Identities=23% Similarity=0.304 Sum_probs=201.5
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc--chhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG--ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
|++.+.||+|++|.||+|.+..+++.+++|.+...... ....+.+|++++++++||+|+++++++. .+...++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR-----HKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc-----cCCCEEE
Confidence 67789999999999999999889999999998744332 3467889999999999999999999853 4478999
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
||||++ +++.+++.... ..+++.++..++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||.+.
T Consensus 76 v~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 76 VFEFMD-TDLYKLIKDRQ-----RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred EEeccC-CCHHHHHHhhc-----ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 999998 58888887642 3689999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC-
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL- 936 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~- 936 (1013)
...... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||......+ ..........
T Consensus 147 ~~~~~~--------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~~~~~~ 217 (283)
T cd05118 147 SFGSPV--------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFKIFRTLGT 217 (283)
T ss_pred ecCCCc--------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCC
Confidence 654322 112234578899999998876 78999999999999999999999996532211 1111111100
Q ss_pred --ChhHHHhhhhhhccchhhhhccCCCCchh-HHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 --PEKVMEIVDPLLLLDLEARASNCGSHRTE-IAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 --~~~~~~~i~~~l~~~~~~R~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+.....+.. +.... ........... .......+..+.+++.+||+.||.+||++.|++.
T Consensus 218 ~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 218 PDPEVWPKFTS-LARNY---KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred CchHhcccchh-hhhhh---hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000111100 00000 00000000011 1122345678899999999999999999999975
No 367
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.98 E-value=9e-32 Score=294.54 Aligned_cols=275 Identities=23% Similarity=0.273 Sum_probs=196.4
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCC-CCccceEEEEeecCCccccceEEE
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIR-HRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
|++.+.||+|++|+||+|+...+++.||+|.+..... .......+|+..+++++ |||++++++++. .++..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~-----~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFR-----ENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhh-----cCCcEEE
Confidence 6788999999999999999988899999999864322 22234567999999998 999999999853 4578999
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
||||+ +++|.+++..... ..+++.++..++.|++.|++|||++ +++|+||+|+||++++++.++|+|||.+.
T Consensus 76 v~e~~-~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRKG----KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred EEecC-CCCHHHHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccce
Confidence 99999 6899998876531 3689999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
...... ......++..|+|||++.+ ..++.++||||||+++|||++|+.||......+ ..........+
T Consensus 148 ~~~~~~---------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~ 217 (283)
T cd07830 148 EIRSRP---------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYKICSVLGT 217 (283)
T ss_pred eccCCC---------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHHHHHhcCC
Confidence 543211 1223457889999998754 467899999999999999999999986542211 11111110000
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhH-HHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEI-AKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.....+.... ......+........... .........+.+++++||+.||++|||++|++.
T Consensus 218 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 218 PTKQDWPEGY-KLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred CChhhhhhHh-hhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000000000 000000000000000000 111112456889999999999999999999975
No 368
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.98 E-value=7.3e-32 Score=291.21 Aligned_cols=244 Identities=23% Similarity=0.292 Sum_probs=187.0
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHH-hcCCCCccceEEEEeecCCccccceEEEEE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEAL-RNIRHRNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
+.||+|+||.||+|.+..+++.||+|++..... .....+..|..++ ...+|||++++++++. ..+..++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ-----SKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE-----cCCeEEEEE
Confidence 579999999999999988899999999864322 1122344555544 4458999999999963 457899999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+++++|.+++... ..+++..+..++.|++.||.|||+. +++||||+|+||++++++.+||+|||+++..
T Consensus 77 e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 77 EYLNGGDCASLIKTL------GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred eccCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 999999999999765 4688999999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhH
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKV 940 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~ 940 (1013)
.. .....++..|+|||...+..++.++||||+|+++|||++|..||...... ..
T Consensus 148 ~~------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~--------- 201 (260)
T cd05611 148 LE------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-----AV--------- 201 (260)
T ss_pred cc------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-----HH---------
Confidence 21 22345788999999998888899999999999999999999999653111 00
Q ss_pred HHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 941 MEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 941 ~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
.......... ... .....++..+.+++.+||+.+|++||++.++.+.+
T Consensus 202 ---~~~~~~~~~~----~~~------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 202 ---FDNILSRRIN----WPE------EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred ---HHHHHhcccC----CCC------cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 0000000000 000 00112345688999999999999999876665544
No 369
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.98 E-value=1.1e-31 Score=301.13 Aligned_cols=284 Identities=18% Similarity=0.217 Sum_probs=198.0
Q ss_pred hccCCC-CCceeeccceEEEEEEECCCCeEEEEEEEeeccccc--------------hhHHHHHHHHHhcCCCCccceEE
Q 001782 698 TNDFSS-SNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGA--------------TKSFVAECEALRNIRHRNLIKII 762 (1013)
Q Consensus 698 ~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~~~ 762 (1013)
.++|.. .+.||+|+||+||+|.+..+++.||+|++....... ...+.+|+++++.++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 356754 577999999999999999889999999986432211 12477899999999999999999
Q ss_pred EEeecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceE
Q 001782 763 TVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVL 842 (1013)
Q Consensus 763 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIl 842 (1013)
+++. .++..++||||++ ++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+
T Consensus 87 ~~~~-----~~~~~~lv~e~~~-~~l~~~l~~~------~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nil 151 (335)
T PTZ00024 87 DVYV-----EGDFINLVMDIMA-SDLKKVVDRK------IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIF 151 (335)
T ss_pred EEEe-----cCCcEEEEEeccc-cCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeE
Confidence 9964 4478999999998 7999998754 4689999999999999999999999 9999999999999
Q ss_pred ecCCCceEEccccccccCCCCCCCcc------ccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCC
Q 001782 843 LDHDMVAHVGDFGLARFLPPCSPATI------LETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRR 915 (1013)
Q Consensus 843 l~~~~~~kl~DFG~a~~~~~~~~~~~------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~ 915 (1013)
++.++.+||+|||.+........... ...........++..|+|||++.+. .++.++||||+||++|||++|+
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 152 INSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred ECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99999999999999986542111000 0011112234568899999998764 4688999999999999999999
Q ss_pred CCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHH
Q 001782 916 RPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMT 995 (1013)
Q Consensus 916 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 995 (1013)
.||......+ ................+-... ..+...+...............+...+.+++.+|++.+|++|||++
T Consensus 232 ~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~ 308 (335)
T PTZ00024 232 PLFPGENEID-QLGRIFELLGTPNEDNWPQAK--KLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAK 308 (335)
T ss_pred CCCCCCCHHH-HHHHHHHHhCCCchhhCcchh--hcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHH
Confidence 9997542211 111111100000000000000 0000000000000000011112345678999999999999999999
Q ss_pred HHHH
Q 001782 996 DVVA 999 (1013)
Q Consensus 996 evl~ 999 (1013)
|++.
T Consensus 309 ~~l~ 312 (335)
T PTZ00024 309 EALK 312 (335)
T ss_pred HHhc
Confidence 9986
No 370
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.98 E-value=1.8e-31 Score=290.86 Aligned_cols=242 Identities=21% Similarity=0.298 Sum_probs=184.3
Q ss_pred ceeeccceEEEEEEECCCCeEEEEEEEeecccc---chhHHHHHHHH---HhcCCCCccceEEEEeecCCccccceEEEE
Q 001782 706 MIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG---ATKSFVAECEA---LRNIRHRNLIKIITVCSSIDFEEVDFKAIV 779 (1013)
Q Consensus 706 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~---l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 779 (1013)
.||+|+||.||+|++..+++.||+|.+...... ....+..|..+ ++...||+|+++++++ ...+..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCEEEEE
Confidence 489999999999999888999999998743221 11223444443 4445799999999885 445789999
Q ss_pred EeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccccc
Q 001782 780 YEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARF 859 (1013)
Q Consensus 780 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 859 (1013)
|||+.+++|.+++... +.+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 76 ~e~~~g~~L~~~l~~~------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 76 LDLMNGGDLHYHLSQH------GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EecCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 9999999999988754 4689999999999999999999999 999999999999999999999999999875
Q ss_pred CCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCCh
Q 001782 860 LPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPE 938 (1013)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~ 938 (1013)
.... ......|+..|+|||++.++ .++.++||||+||++|||++|+.||........ ..
T Consensus 147 ~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--~~-------- 206 (278)
T cd05606 147 FSKK----------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HE-------- 206 (278)
T ss_pred cCcc----------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--HH--------
Confidence 4221 11234689999999998754 689999999999999999999999976422111 00
Q ss_pred hHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-----CHHHHHH
Q 001782 939 KVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-----QMTDVVA 999 (1013)
Q Consensus 939 ~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 999 (1013)
..... ....+ ... ...+..+.+++.+|+..+|.+|| ++.|+++
T Consensus 207 -~~~~~---~~~~~----~~~----------~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 207 -IDRMT---LTMAV----ELP----------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred -HHHHh---hccCC----CCC----------CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 00000 00000 000 01235678899999999999999 9999975
No 371
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=3e-32 Score=250.25 Aligned_cols=275 Identities=20% Similarity=0.293 Sum_probs=199.2
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|...++||+|.||+||+|+..++.+.||+|.++.+.. .......+|+-+++.++|.||++++++ ...+....
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dv-----lhsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV-----LHSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhh-----hccCceeE
Confidence 46667899999999999999999999999999985543 334668899999999999999999998 44568899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+|+|||+ .+|..|..... +.++.+.+..++.|+++|+.|.|++ ++.|||+||+|.++..+|..|++|||+|
T Consensus 78 lvfe~cd-qdlkkyfdsln-----g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 78 LVFEFCD-QDLKKYFDSLN-----GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred EeHHHhh-HHHHHHHHhcC-----CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchh
Confidence 9999999 78999887753 5789999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCC-CCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHHHHHHhh
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGD-MSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHEFAKMA 935 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~~~~~~~ 935 (1013)
+.++..- ......+-|.+|++|.++.+.. |+...|+||.||++.|+.. |++.|..... +.++..+.+..
T Consensus 149 rafgipv--------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv-ddqlkrif~~l 219 (292)
T KOG0662|consen 149 RAFGIPV--------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-DDQLKRIFRLL 219 (292)
T ss_pred hhcCCce--------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH-HHHHHHHHHHh
Confidence 8765321 1122345689999999998864 8889999999999999997 6666665322 23333333322
Q ss_pred CChhHHHhhhhhhccchhhhhccCCCCchhHHH-HHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 936 LPEKVMEIVDPLLLLDLEARASNCGSHRTEIAK-IEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..+.-..+-.-....|+..-|... +. ....+ .......=.+++.+.+.-+|.+|.++++.++
T Consensus 220 g~p~ed~wps~t~lpdyk~yp~yp-at-tswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 220 GTPTEDQWPSMTKLPDYKPYPIYP-AT-TSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCCccccCCccccCCCCcccCCcc-cc-chHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 111111110000001111101000 00 00001 1111112345677788889999999998875
No 372
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.98 E-value=5e-32 Score=277.69 Aligned_cols=275 Identities=22% Similarity=0.330 Sum_probs=218.6
Q ss_pred hhhhhhhhccCCCCCceeeccceEEEEEEECCCC-----eEEEEEEEeeccc-cchhHHHHHHHHHhcCCCCccceEEEE
Q 001782 691 YADLSKATNDFSSSNMIGQGSFGFVYRGNLGENE-----MAVAVKVMNLKQR-GATKSFVAECEALRNIRHRNLIKIITV 764 (1013)
Q Consensus 691 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~ 764 (1013)
.+++.....|++....+.+|.||.||.|.+++.+ +.|.+|.++.... -....+..|...+..+.|||+.++.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 3445555677888889999999999999886543 3456666653322 233567888888999999999999999
Q ss_pred eecCCccccceEEEEEeeccCCCHHHHhhccccc--cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceE
Q 001782 765 CSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQ--LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVL 842 (1013)
Q Consensus 765 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIl 842 (1013)
+. ++....++++.++.-|+|..|+...+.. .....++..+...++.|++.|++|||++ +|||.||.++|.+
T Consensus 356 ~i----e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCv 428 (563)
T KOG1024|consen 356 SI----EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCV 428 (563)
T ss_pred Ee----eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcce
Confidence 84 5667888999999999999999844322 1224677888999999999999999999 9999999999999
Q ss_pred ecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCc
Q 001782 843 LDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-RRRPTDNM 921 (1013)
Q Consensus 843 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G~~pf~~~ 921 (1013)
+|+..++||+|=.+++.+-+.+.....+.+ ..+..||+||.+....|+.++||||||+++|||+| |+.||...
T Consensus 429 Idd~LqVkltDsaLSRDLFP~DYhcLGDnE------nRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI 502 (563)
T KOG1024|consen 429 IDDQLQVKLTDSALSRDLFPGDYHCLGDNE------NRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI 502 (563)
T ss_pred ehhheeEEeccchhccccCcccccccCCCC------CCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc
Confidence 999999999999999998887776664443 34679999999999999999999999999999999 99998764
Q ss_pred CCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 922 FNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
+.. +....+.+. .++.++-.||++++.+|.-||+.+|++||+++|++.-|
T Consensus 503 DPf--------------Em~~ylkdG----------------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cL 552 (563)
T KOG1024|consen 503 DPF--------------EMEHYLKDG----------------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICL 552 (563)
T ss_pred CHH--------------HHHHHHhcc----------------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHH
Confidence 211 122222111 12334457899999999999999999999999999999
Q ss_pred HHhhhhh
Q 001782 1002 CSARKIF 1008 (1013)
Q Consensus 1002 ~~~~~~~ 1008 (1013)
.+.-..+
T Consensus 553 seF~~ql 559 (563)
T KOG1024|consen 553 SEFHTQL 559 (563)
T ss_pred HHHHHHH
Confidence 8875443
No 373
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.98 E-value=8.6e-32 Score=296.47 Aligned_cols=254 Identities=24% Similarity=0.303 Sum_probs=193.2
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 774 (1013)
..++|++.+.||+|+||.||+|++..+++.||||+++.... .....+..|+.++.+. .||||+++++++. ...
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~ 87 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFI-----TDS 87 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeee-----cCC
Confidence 35678999999999999999999998899999999974432 2334566777777666 4999999999964 346
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHH-HCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
..++||||+. +++.++..... ..+++.++..++.|++.|++|||+ . +|+||||+|+||++++++.+||+|
T Consensus 88 ~~~~v~e~~~-~~l~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~d 158 (296)
T cd06618 88 DVFICMELMS-TCLDKLLKRIQ-----GPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCD 158 (296)
T ss_pred eEEEEeeccC-cCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECc
Confidence 7999999987 67877776532 368899999999999999999997 5 899999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCC----CCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGD----MSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLH 929 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~ 929 (1013)
||.+..+.... ......++..|+|||++.+.. ++.++||||||+++|+|++|+.||.........
T Consensus 159 fg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-- 227 (296)
T cd06618 159 FGISGRLVDSK---------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEV-- 227 (296)
T ss_pred cccchhccCCC---------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHH--
Confidence 99987553211 112234778999999987654 788999999999999999999999652111000
Q ss_pred HHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 930 EFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 930 ~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
....+.. .. +.... ...++..+.+++.+||+.||++||++.++++.
T Consensus 228 ----------~~~~~~~----~~---~~~~~--------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 228 ----------LTKILQE----EP---PSLPP--------NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred ----------HHHHhcC----CC---CCCCC--------CCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0111110 00 00000 00123467899999999999999999999765
No 374
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.98 E-value=1.2e-31 Score=296.71 Aligned_cols=250 Identities=26% Similarity=0.349 Sum_probs=194.6
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
...|+..+.||+|+||.||+|++..++..||+|.+.... ....+++.+|+++++.++|+|++++++++. ...
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 88 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-----REH 88 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEE-----cCC
Confidence 445778899999999999999998889999999986432 223356788999999999999999999964 346
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..++||||+. |++.+++.... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.+||+||
T Consensus 89 ~~~lv~e~~~-~~l~~~~~~~~-----~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~df 159 (308)
T cd06634 89 TAWLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDF 159 (308)
T ss_pred eeEEEEEccC-CCHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCc
Confidence 7899999997 68888776432 3578999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM---GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEF 931 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~ 931 (1013)
|++..... .....++..|+|||++. ...++.++|||||||++|+|++|..||........ .
T Consensus 160 g~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~--- 223 (308)
T cd06634 160 GSASIMAP------------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-L--- 223 (308)
T ss_pred ccceeecC------------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH-H---
Confidence 99875432 12345788999999874 35678899999999999999999999865311100 0
Q ss_pred HHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHH
Q 001782 932 AKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLC 1002 (1013)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1002 (1013)
....... .+ .. ........+.+++.+||+.+|.+||++.++++.-.
T Consensus 224 ---------~~~~~~~---~~----~~---------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 224 ---------YHIAQNE---SP----AL---------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred ---------HHHhhcC---CC----Cc---------CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 0000000 00 00 00122455788999999999999999999987543
No 375
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.98 E-value=1.1e-31 Score=289.27 Aligned_cols=250 Identities=24% Similarity=0.306 Sum_probs=200.5
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+|++.++||+|+||.||++++..+++.+|+|.+.... ......+.+|++++++++||||+++.+++ ......+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAF-----LDGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhh-----ccCCEEE
Confidence 5788999999999999999999899999999987432 23345678899999999999999999885 3447899
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||+++++|.+++..... ....+++.+++.++.|++.|++|||+. +++|+||+|+||++++++.+|++|||++
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~ 150 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKK--KRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGIS 150 (256)
T ss_pred EEehhcCCCCHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccch
Confidence 99999999999999876322 124688999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCC
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALP 937 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~ 937 (1013)
...... ......++..|+|||.+.+..++.++|+||+|+++|||++|+.||...... ..
T Consensus 151 ~~~~~~----------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-----~~------ 209 (256)
T cd08530 151 KVLKKN----------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-----DL------ 209 (256)
T ss_pred hhhccC----------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HH------
Confidence 865432 112245788999999999999999999999999999999999999653211 00
Q ss_pred hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 938 EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 938 ~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
...+. .... ... .......+.+++.+|++.+|++||++.|+++
T Consensus 210 ---~~~~~---~~~~-----------~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 210 ---RYKVQ---RGKY-----------PPI--PPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ---HHHHh---cCCC-----------CCC--chhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 0000 000 0123456889999999999999999999975
No 376
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=8.5e-32 Score=294.23 Aligned_cols=256 Identities=25% Similarity=0.378 Sum_probs=202.2
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec---cccchhHHHHHHHHHhcCC-CCccceEEEEeecCCccccc
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK---QRGATKSFVAECEALRNIR-HRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 774 (1013)
++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|++++++++ ||||+++++++ ...+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF-----QDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh-----cCCc
Confidence 4789999999999999999999989999999998642 2233456889999999998 99999999884 4557
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..++||||+++++|.+++... +.+++.+++.++.|++.|++|||+. +++|+||+|+||+++.++.++++||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKY------GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCC
Confidence 899999999999999999865 4789999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCcc------------ccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcC
Q 001782 855 GLARFLPPCSPATI------------LETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMF 922 (1013)
Q Consensus 855 G~a~~~~~~~~~~~------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~ 922 (1013)
|.+........... ...........++..|+|||+..+..++.++||||+|+++|++++|+.||....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 99986654322100 001122345567899999999988889999999999999999999999997532
Q ss_pred CCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCH----HHHH
Q 001782 923 NDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQM----TDVV 998 (1013)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~----~evl 998 (1013)
. ... ......... ..+ ...+..+.+++.+|++.+|.+||++ +|++
T Consensus 227 ~----~~~---------~~~~~~~~~-~~~-----------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll 275 (280)
T cd05581 227 E----YLT---------FQKILKLEY-SFP-----------------PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELK 275 (280)
T ss_pred H----HHH---------HHHHHhcCC-CCC-----------------CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHh
Confidence 1 000 001100000 000 1114457899999999999999999 7765
Q ss_pred H
Q 001782 999 A 999 (1013)
Q Consensus 999 ~ 999 (1013)
.
T Consensus 276 ~ 276 (280)
T cd05581 276 A 276 (280)
T ss_pred c
Confidence 4
No 377
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=7.4e-32 Score=303.92 Aligned_cols=267 Identities=20% Similarity=0.306 Sum_probs=220.5
Q ss_pred cchhhhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcC-CCCccceEEEEeec
Q 001782 689 VSYADLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNI-RHRNLIKIITVCSS 767 (1013)
Q Consensus 689 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 767 (1013)
..++.+...++.|++.++||+|.+|.||+++...+++.+|+|+.....+ ..+++..|+++++.. .|||++.++|++.-
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 4455666678899999999999999999999999999999999875544 346678899999988 69999999999987
Q ss_pred CCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC
Q 001782 768 IDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM 847 (1013)
Q Consensus 768 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 847 (1013)
.+...++..|+|||||.+||..|+++.... .++.|..+..|++.++.|+.+||.. .++|||||-.|||++.++
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g----~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~ 160 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKG----NRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENA 160 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhcc----cchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccC
Confidence 777788999999999999999999998753 6899999999999999999999999 999999999999999999
Q ss_pred ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCC-----CCCcccchHHHHHHHHHHHhCCCCCCCcC
Q 001782 848 VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-----DMSATGDVYSFGILLLEMFTRRRPTDNMF 922 (1013)
Q Consensus 848 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DIwSlG~il~ell~G~~pf~~~~ 922 (1013)
.||++|||.+..++ .+.......+||+.|||||++... .|+.++|+||+|++..||..|.+|+.++.
T Consensus 161 ~VKLvDFGvSaQld--------sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH 232 (953)
T KOG0587|consen 161 EVKLVDFGVSAQLD--------STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH 232 (953)
T ss_pred cEEEeeeeeeeeee--------cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc
Confidence 99999999998654 334446678899999999998754 47778999999999999999999998753
Q ss_pred CCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 923 NDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
... .++ ... ....+.+..++....++.++|..|+..|-.+||++.++++
T Consensus 233 Pmr----------------aLF----~Ip--------RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 233 PMR----------------ALF----LIP--------RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred hhh----------------hhc----cCC--------CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 221 000 000 0111222334555677889999999999999999988864
No 378
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.7e-32 Score=283.83 Aligned_cols=137 Identities=24% Similarity=0.375 Sum_probs=121.9
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCC--------CCccceEEEEeecCC
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIR--------HRNLIKIITVCSSID 769 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~~~~ 769 (1013)
.++|.+.++||.|.|++||+|.+..+.+.||+|+.+. .....+....||++|++++ ..+||++++.|...
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS-AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs- 154 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS-AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS- 154 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh-hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec-
Confidence 3699999999999999999999999999999999973 3344567789999999983 24799999998765
Q ss_pred ccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEe
Q 001782 770 FEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLL 843 (1013)
Q Consensus 770 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll 843 (1013)
..++.++|+|+|++. .+|..+|..... +.++...+.+|+.||+.||.|||+.| ||||.||||+|||+
T Consensus 155 GpNG~HVCMVfEvLG-dnLLklI~~s~Y----rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVLG-DNLLKLIKYSNY----RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCCcEEEEEehhhh-hHHHHHHHHhCC----CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 678899999999997 799999988755 58999999999999999999999998 99999999999999
No 379
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=3.1e-31 Score=294.11 Aligned_cols=246 Identities=26% Similarity=0.353 Sum_probs=192.0
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.|...++||+|+||+||+|++..+++.||+|++..... ...+.+.+|+++++.++|||++++++++. +....
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 96 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL-----KEHTA 96 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE-----eCCEE
Confidence 36667889999999999999988999999999874332 22346788999999999999999999964 44778
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||+. +++.+++.... ..+++.++..++.|++.|++|||+. |++||||+|+||+++.++.+||+|||+
T Consensus 97 ~lv~e~~~-~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~ 167 (313)
T cd06633 97 WLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGS 167 (313)
T ss_pred EEEEecCC-CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCC
Confidence 99999997 68888876542 3688999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM---GGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
+..... .....|+..|+|||++. .+.++.++|||||||++|||++|..||....... ..
T Consensus 168 ~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~----~~-- 229 (313)
T cd06633 168 ASKSSP------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----AL-- 229 (313)
T ss_pred CcccCC------------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH----HH--
Confidence 863211 22346888999999974 4568889999999999999999999986532110 00
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
...... ..+ ... ....+..+.+++.+|++.+|.+||++.+++..
T Consensus 230 -------~~~~~~---~~~----~~~---------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 230 -------YHIAQN---DSP----TLQ---------SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -------HHHHhc---CCC----CCC---------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 000 000 01122457789999999999999999999863
No 380
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=2.6e-31 Score=290.71 Aligned_cols=273 Identities=23% Similarity=0.327 Sum_probs=199.5
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
|+..+.||+|++|.||+|+...+++.||+|++.... ....+.+..|++++++++|+|++++++++. .....++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH-----TERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh-----cCCceEE
Confidence 567789999999999999999889999999998553 333466788999999999999999999853 4478999
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
||||++ ++|.+++.... ..+++.++..++.|++.|++|||++ +|+||||+|+||++++++.+||+|||.++
T Consensus 76 v~e~~~-~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRP-----GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred EecCcC-cCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCccc
Confidence 999998 69999998652 3689999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhC-
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMAL- 936 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~- 936 (1013)
....... ......++..|+|||++.+. .++.++|||||||++|||++|+.||...... ...........
T Consensus 147 ~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~ 217 (282)
T cd07829 147 AFGIPLR--------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIFQILGT 217 (282)
T ss_pred ccCCCcc--------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCC
Confidence 6532211 12233457789999998776 7899999999999999999999999653211 11111111100
Q ss_pred C-hhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 937 P-EKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 937 ~-~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+ +.....+...-. ......... ..............+.+++.+|+..||++||++.+++.
T Consensus 218 ~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 218 PTEESWPGVTKLPD--YKPTFPKFP-PKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred CcHHHHHhhccccc--ccccccccC-ccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0 000000000000 000000000 00000111122457899999999999999999999975
No 381
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.8e-33 Score=288.51 Aligned_cols=212 Identities=26% Similarity=0.418 Sum_probs=179.6
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-------cchhHHHHHHHHHhcCCCCccceEEEEeecCCc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-------GATKSFVAECEALRNIRHRNLIKIITVCSSIDF 770 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 770 (1013)
.++|-..+.||+|||+.||+|.+....+.||+|+-..... ...+...+|.+|-+.+.||.||++|+++.
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs---- 537 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS---- 537 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee----
Confidence 4578889999999999999999998899999998753321 11244688999999999999999999974
Q ss_pred cccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC---C
Q 001782 771 EEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD---M 847 (1013)
Q Consensus 771 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~ 847 (1013)
-+.+..|-|+|||+|-+|+-|++.. +.+++.++..|+.||+.||.||.+. +++|||-|+||.|||+... |
T Consensus 538 lDtdsFCTVLEYceGNDLDFYLKQh------klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacG 610 (775)
T KOG1151|consen 538 LDTDSFCTVLEYCEGNDLDFYLKQH------KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACG 610 (775)
T ss_pred eccccceeeeeecCCCchhHHHHhh------hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccc
Confidence 3457789999999999999999987 5789999999999999999999997 5689999999999999654 6
Q ss_pred ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCC----CCCcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 848 VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG----DMSATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 848 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
.+||+|||+++.++++..... ....-.....||.+|.+||.+--+ .++.++||||.||++|..+.|+.||...
T Consensus 611 eIKITDFGLSKIMdddSy~~v-dGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn 687 (775)
T KOG1151|consen 611 EIKITDFGLSKIMDDDSYNSV-DGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN 687 (775)
T ss_pred eeEeeecchhhhccCCccCcc-cceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc
Confidence 899999999999887655433 233345567799999999986543 4788999999999999999999999874
No 382
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=2.2e-31 Score=292.20 Aligned_cols=257 Identities=20% Similarity=0.255 Sum_probs=196.5
Q ss_pred cCCCCCceeeccceEEEEEEEC---CCCeEEEEEEEeecc----ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCcc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLG---ENEMAVAVKVMNLKQ----RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFE 771 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 771 (1013)
+|++.+.||+|+||.||+|++. .++..||+|+++... ....+.+.+|+++++++ +||+|+++++.+ .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF-----Q 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee-----e
Confidence 4778899999999999999864 356889999987332 22335678999999999 599999999884 4
Q ss_pred ccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEE
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHV 851 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 851 (1013)
.+...++||||+++++|.+++... ..+++.++..++.|+++||+|||+. +++||||+|+||+++.++.++|
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQR------EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhc------CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEE
Confidence 557889999999999999998754 4688999999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCCCCcccccccccccccccCCCC--CCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHH
Q 001782 852 GDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGD--MSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLH 929 (1013)
Q Consensus 852 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~ 929 (1013)
+|||+++....... .......|+..|+|||...+.. .+.++||||||+++|||++|..||...... ....
T Consensus 147 ~dfg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~ 218 (288)
T cd05583 147 TDFGLSKEFLAEEE-------ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQS 218 (288)
T ss_pred EECccccccccccc-------cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHH
Confidence 99999876532211 1122345789999999987765 788999999999999999999998642111 0011
Q ss_pred HHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHh
Q 001782 930 EFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSA 1004 (1013)
Q Consensus 930 ~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1004 (1013)
++........+.. .......+.+++.+||+.||++|||+.++.+.|+..
T Consensus 219 ------------~~~~~~~~~~~~~--------------~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 219 ------------EISRRILKSKPPF--------------PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred ------------HHHHHHHccCCCC--------------CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 1111111111100 011234577899999999999999998887766543
No 383
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-31 Score=315.46 Aligned_cols=269 Identities=25% Similarity=0.402 Sum_probs=209.5
Q ss_pred hhhhccCCCCCceeeccceEEEEEEECC-------CCeEEEEEEEeeccc-cchhHHHHHHHHHhcC-CCCccceEEEEe
Q 001782 695 SKATNDFSSSNMIGQGSFGFVYRGNLGE-------NEMAVAVKVMNLKQR-GATKSFVAECEALRNI-RHRNLIKIITVC 765 (1013)
Q Consensus 695 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 765 (1013)
+...++..+.+.+|+|.||.||+|.... ....||||..+.... .+.+.+..|+++|+.+ +||||+.++|+|
T Consensus 292 e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 292 EIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred eechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence 3344555677899999999999997531 156799999874433 3557799999999999 599999999998
Q ss_pred ecCCccccceEEEEEeeccCCCHHHHhhccc--ccccc--------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecC
Q 001782 766 SSIDFEEVDFKAIVYEYMECGSLEDWLHQSN--DQLEV--------GNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGD 835 (1013)
Q Consensus 766 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~--------~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~D 835 (1013)
.. .+..++|+||+..|+|.+|++..+ ...+. ..++..+.+.++.|||.|++||++. ++||||
T Consensus 372 t~-----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRD 443 (609)
T KOG0200|consen 372 TQ-----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRD 443 (609)
T ss_pred cc-----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchh
Confidence 64 478999999999999999999886 11111 1388999999999999999999999 999999
Q ss_pred CCCCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh-C
Q 001782 836 LKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT-R 914 (1013)
Q Consensus 836 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~-G 914 (1013)
+.++|||+.++..+||+|||+|+........... .....-+..|||||.+....|+.++||||||+++|||++ |
T Consensus 444 LAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~-----~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG 518 (609)
T KOG0200|consen 444 LAARNVLITKNKVIKIADFGLARDHYNKDYYRTK-----SSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLG 518 (609)
T ss_pred hhhhhEEecCCCEEEEccccceeccCCCCceEec-----CCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCC
Confidence 9999999999999999999999865443322110 011013567999999999999999999999999999999 9
Q ss_pred CCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCH
Q 001782 915 RRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQM 994 (1013)
Q Consensus 915 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 994 (1013)
..||.+.... +++.+.+++.. +.++++.|..+++++|+.||+.+|++||++
T Consensus 519 ~~PYp~~~~~-------------~~l~~~l~~G~----------------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F 569 (609)
T KOG0200|consen 519 GTPYPGIPPT-------------EELLEFLKEGN----------------RMEQPEHCSDEIYDLMKSCWNADPEDRPTF 569 (609)
T ss_pred CCCCCCCCcH-------------HHHHHHHhcCC----------------CCCCCCCCCHHHHHHHHHHhCCCcccCCCH
Confidence 9999763111 11112221111 112234556788999999999999999999
Q ss_pred HHHHHHHHHhh
Q 001782 995 TDVVAKLCSAR 1005 (1013)
Q Consensus 995 ~evl~~L~~~~ 1005 (1013)
.|+.+.++...
T Consensus 570 ~~~~~~~~~~l 580 (609)
T KOG0200|consen 570 SECVEFFEKHL 580 (609)
T ss_pred HHHHHHHHHHH
Confidence 99999999854
No 384
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=1e-33 Score=276.40 Aligned_cols=254 Identities=23% Similarity=0.244 Sum_probs=192.6
Q ss_pred CCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhc-CCCCccceEEEEeecCCccccceEEEEEe
Q 001782 704 SNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRN-IRHRNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 704 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
...||.|+||+|++-.++.+|+..|||.++.... .+.+++..|.+...+ -+.|+||++||++.. ++..|+.||
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~-----EGdcWiCME 143 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS-----EGDCWICME 143 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc-----CCceeeeHH
Confidence 4679999999999999999999999999986554 456778888886544 479999999999743 366799999
Q ss_pred eccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCC
Q 001782 782 YMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLP 861 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 861 (1013)
.|+ .|++.+-+.... .....+++.-.-+|....+.||.||.+.. .|||||+||+|||++..|.+||||||++..+.
T Consensus 144 LMd-~SlDklYk~vy~-vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 144 LMD-ISLDKLYKRVYS-VQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred HHh-hhHHHHHHHHHH-HHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHH
Confidence 998 777665433211 12247888888999999999999999876 89999999999999999999999999987543
Q ss_pred CCCCCccccCCCCCcccccccccccccccCCC--CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChh
Q 001782 862 PCSPATILETPSSSTGIKGTVGYVAPEYGMGG--DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEK 939 (1013)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~ 939 (1013)
. ....+...|...|||||.+... .|+.++||||||+++||+.||..||..+...-
T Consensus 220 ~---------SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svf-------------- 276 (361)
T KOG1006|consen 220 D---------SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVF-------------- 276 (361)
T ss_pred H---------HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHH--------------
Confidence 2 1223445688999999998754 48889999999999999999999998653211
Q ss_pred HHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 940 VMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 940 ~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+-+......||..-.+.. +..+....+.+++..|+..|-.+||...++.+
T Consensus 277 --eql~~Vv~gdpp~l~~~~--------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 277 --EQLCQVVIGDPPILLFDK--------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred --HHHHHHHcCCCCeecCcc--------cccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 111222222221100000 00123456788999999999999999998765
No 385
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.5e-31 Score=300.57 Aligned_cols=279 Identities=20% Similarity=0.247 Sum_probs=199.2
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCc-ccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDF-EEV 773 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 773 (1013)
..++|++.+.||+|++|.||+|++..+++.||+|++.... ....+.+.+|+.++++++|||++++.+++..... ...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4678999999999999999999999899999999986432 2233567789999999999999999887543211 222
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
...++|+||+. ++|.+++.. ..+++.++..++.|++.|++|||+. ||+||||||+||+++.++.+||+|
T Consensus 93 ~~~~lv~e~~~-~~L~~~~~~-------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~d 161 (343)
T cd07851 93 QDVYLVTHLMG-ADLNNIVKC-------QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILD 161 (343)
T ss_pred ccEEEEEecCC-CCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcc
Confidence 35899999985 799999875 3689999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFA 932 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~ 932 (1013)
||++...... .....++..|+|||.+.+ ..++.++||||+||++||+++|+.||...... .......
T Consensus 162 fg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~ 229 (343)
T cd07851 162 FGLARHTDDE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIM 229 (343)
T ss_pred cccccccccc-----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH
Confidence 9998754321 223457889999998765 36788999999999999999999999753221 1111111
Q ss_pred HhhCChhHHHhhhhhhccchhhhhc-cCCCCchhHH-HHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 933 KMALPEKVMEIVDPLLLLDLEARAS-NCGSHRTEIA-KIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~R~~-~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
.. .+....++..+........-.. .....+.... ........+.+++.+|++.||++|||+.||++
T Consensus 230 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 230 NL-VGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred Hh-cCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 10 0000001111000000000000 0000000111 11123567889999999999999999999975
No 386
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=4.2e-31 Score=290.18 Aligned_cols=252 Identities=22% Similarity=0.296 Sum_probs=192.4
Q ss_pred cCCCCCceeeccceEEEEEEEC---CCCeEEEEEEEeecc----ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCcc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLG---ENEMAVAVKVMNLKQ----RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFE 771 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 771 (1013)
.|++.+.||+|+||.||.|++. .++..||+|++.... ....+.+.+|+.+++++ +|++|+++++++ +
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 4788899999999999999884 367899999987432 12335678899999999 599999999885 3
Q ss_pred ccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEE
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHV 851 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 851 (1013)
.+...++||||+++++|.+++... ..+++.++..++.|++.||+|||+. +++||||+|+||+++.++.+||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQR------ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEE
Confidence 457889999999999999999765 4678899999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCCCCcccccccccccccccCCC--CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHH
Q 001782 852 GDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG--DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLH 929 (1013)
Q Consensus 852 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~ 929 (1013)
+|||++........ .......|+..|+|||++.+. .++.++||||||+++|+|++|+.||...... ....
T Consensus 147 ~dfg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~ 218 (290)
T cd05613 147 TDFGLSKEFHEDEV-------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQA 218 (290)
T ss_pred eeCccceecccccc-------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHH
Confidence 99999875432111 112235688999999998753 4678999999999999999999998642111 1111
Q ss_pred HHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCC-----CHHHHHH
Q 001782 930 EFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERI-----QMTDVVA 999 (1013)
Q Consensus 930 ~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 999 (1013)
++.+......+. . .......+.+++.+|++.||++|| ++.++++
T Consensus 219 ------------~~~~~~~~~~~~----~----------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 219 ------------EISRRILKSEPP----Y----------PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ------------HHHHHhhccCCC----C----------CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 111111111110 0 011234577899999999999997 6666655
No 387
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-32 Score=286.36 Aligned_cols=237 Identities=26% Similarity=0.409 Sum_probs=191.7
Q ss_pred CCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEe
Q 001782 704 SNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 704 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
.++||+|-||+||-|+++.+|+.||||++.... ......+.+|+.|++.++||.||.+.-. ++..+..++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M-----~ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECM-----FETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEe-----ecCCceEEEEeh
Confidence 489999999999999999999999999997432 2234678999999999999999999887 456688999999
Q ss_pred eccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC---CceEEccccccc
Q 001782 782 YMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD---MVAHVGDFGLAR 858 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DFG~a~ 858 (1013)
-+. |+..++|-.... +++++.....+..||+.||.|||.+ +|||+|+||+|||+... -.+||||||+|+
T Consensus 644 Kl~-GDMLEMILSsEk----gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 644 KLH-GDMLEMILSSEK----GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred hhc-chHHHHHHHhhc----ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecccccee
Confidence 998 677777765532 7899999999999999999999999 99999999999999654 389999999999
Q ss_pred cCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHH--HH----
Q 001782 859 FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHE--FA---- 932 (1013)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~--~~---- 932 (1013)
.+++. ......+||+.|.|||++..+.|...-|+||.||++|--+.|..||....+..+++.. +.
T Consensus 716 iIgEk---------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~ 786 (888)
T KOG4236|consen 716 IIGEK---------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPN 786 (888)
T ss_pred ecchh---------hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCC
Confidence 87642 2245678999999999999999999999999999999999999999753222222111 11
Q ss_pred -HhhCChhHHHhhhhhhccchhhhhccCCCC
Q 001782 933 -KMALPEKVMEIVDPLLLLDLEARASNCGSH 962 (1013)
Q Consensus 933 -~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~ 962 (1013)
+..++..+.++|...+.....+|++.....
T Consensus 787 PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 787 PWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred chhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 122345567777777777777777654433
No 388
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=3.5e-31 Score=319.85 Aligned_cols=148 Identities=30% Similarity=0.486 Sum_probs=131.6
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
.++|++.++||+|+||.||+|++..+++.||||+++.... .....+..|+.+++.++||||+++++++ ....
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL-----QSAN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE-----EECC
Confidence 3689999999999999999999998999999999974322 2235688999999999999999999885 3457
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..|+||||+.+++|.+++... +.+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~------~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DF 148 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIY------GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDF 148 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeC
Confidence 899999999999999999765 4678899999999999999999999 9999999999999999999999999
Q ss_pred ccccc
Q 001782 855 GLARF 859 (1013)
Q Consensus 855 G~a~~ 859 (1013)
|+++.
T Consensus 149 Gls~~ 153 (669)
T cd05610 149 GLSKV 153 (669)
T ss_pred CCCcc
Confidence 99863
No 389
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-32 Score=316.47 Aligned_cols=209 Identities=25% Similarity=0.367 Sum_probs=184.4
Q ss_pred hhhhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEee---ccccchhHHHHHHHHHhcCCCCccceEEEEeec
Q 001782 691 YADLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNL---KQRGATKSFVAECEALRNIRHRNLIKIITVCSS 767 (1013)
Q Consensus 691 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 767 (1013)
..+++-..++|.+.++||+|+||.|..++.+.+++.||+|++.. -.+....-|..|.++|..-+.+-|+++.-+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA--- 143 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA--- 143 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH---
Confidence 45566667899999999999999999999999999999999974 234455679999999999899999988766
Q ss_pred CCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC
Q 001782 768 IDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM 847 (1013)
Q Consensus 768 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 847 (1013)
|.++.+.|+|||||+||+|-.++... .++++..++.++..|+.||..+|+. |+|||||||+|||+|..|
T Consensus 144 --FQD~~~LYlVMdY~pGGDlltLlSk~------~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~G 212 (1317)
T KOG0612|consen 144 --FQDERYLYLVMDYMPGGDLLTLLSKF------DRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSG 212 (1317)
T ss_pred --hcCccceEEEEecccCchHHHHHhhc------CCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccC
Confidence 67889999999999999999999887 4699999999999999999999999 999999999999999999
Q ss_pred ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCC-----CCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 848 VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-----GDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 848 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
++||+|||.+..+..+... .....+|||.|.+||++.. +.|++.+|.||+||++|||+.|..||..
T Consensus 213 HikLADFGsClkm~~dG~V-------~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 213 HIKLADFGSCLKMDADGTV-------RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred cEeeccchhHHhcCCCCcE-------EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 9999999999877643322 2455789999999998753 5789999999999999999999999975
No 390
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-32 Score=280.08 Aligned_cols=245 Identities=24% Similarity=0.345 Sum_probs=201.8
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec---cccchhHHHHHHHHHhcC-CCCccceEEEEeecCCcccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK---QRGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 773 (1013)
..+|....+||+|+||.|.+|+.+++.+.+|||+++.+ +..+.+--+.|-++|..- +-|.++++..+ ++.-
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc-----FQTm 422 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC-----FQTM 422 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH-----hhhh
Confidence 34788899999999999999999999999999999743 233344456777788776 46788888776 4555
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
+..|+||||+.||+|--.+++. +.+.+..+..+|..||-||-+||++ ||++||+|.+|||+|.+|++||+|
T Consensus 423 DRLyFVMEyvnGGDLMyhiQQ~------GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~D 493 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYHIQQV------GKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIAD 493 (683)
T ss_pred hheeeEEEEecCchhhhHHHHh------cccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeee
Confidence 8899999999999999888876 6788889999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
||+++.- .........++||+.|+|||++...+|+.++|.||+||++|||+.|++||+....+ ..+..+..
T Consensus 494 FGmcKEn--------i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~-elF~aI~e 564 (683)
T KOG0696|consen 494 FGMCKEN--------IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED-ELFQAIME 564 (683)
T ss_pred ccccccc--------ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHH
Confidence 9998732 11223356789999999999999999999999999999999999999999875333 33333333
Q ss_pred hh------CChhHHHhhhhhhccchhhhhccCCCCchh
Q 001782 934 MA------LPEKVMEIVDPLLLLDLEARASNCGSHRTE 965 (1013)
Q Consensus 934 ~~------~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~ 965 (1013)
.. .+.++.++....+...|..|.......+..
T Consensus 565 hnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~d 602 (683)
T KOG0696|consen 565 HNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERD 602 (683)
T ss_pred ccCcCcccccHHHHHHHHHHhhcCCccccCCCCccccc
Confidence 32 345688889999999999998876655443
No 391
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=4.6e-31 Score=284.98 Aligned_cols=251 Identities=23% Similarity=0.298 Sum_probs=193.0
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-----ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-----RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 774 (1013)
+|.+.++||+|+||.||+|++...+..+++|+.+... ......+..|+.+++.++||||+++++++ .+..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASF-----LERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHH-----hcCC
Confidence 5889999999999999999998776667777765321 12234567899999999999999999885 3446
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..++||||+++++|.+++..... ....+++.+++.++.|++.|+.|||+. +++|+||+|+||+++. +.+||+||
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~ 149 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKH--TGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDF 149 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhh--cccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeeccc
Confidence 78999999999999999875322 124689999999999999999999999 9999999999999975 56999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
|.+....... .......|+..|+|||...+..++.++|+||||+++|+|++|..||.... .....
T Consensus 150 g~~~~~~~~~--------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~----~~~~~--- 214 (260)
T cd08222 150 GVSRLLMGSC--------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN----FLSVV--- 214 (260)
T ss_pred CceeecCCCc--------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHHHH---
Confidence 9987653211 11223457889999999988889999999999999999999999986421 00000
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
....... .+. . ....+..+.+++.+|++.+|++||++.|+++
T Consensus 215 ----------~~~~~~~---~~~--------~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 215 ----------LRIVEGP---TPS--------L--PETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ----------HHHHcCC---CCC--------C--cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 0000000 000 0 0133456788999999999999999999986
No 392
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-31 Score=292.22 Aligned_cols=241 Identities=23% Similarity=0.227 Sum_probs=192.7
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccce
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
.++.|.....+|.|+|+.|-.+.+..+++..++|++.... .+-.+|+.++... +||||+++.+.+ .++.+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~-----~~~~~ 390 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVY-----EDGKE 390 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeeccee-----cCCce
Confidence 3567888888999999999999999999999999997442 2334677666666 699999999995 56689
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEe-cCCCceEEccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLL-DHDMVAHVGDF 854 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kl~DF 854 (1013)
.|+|||.+.++-+.+.+...+ ....++..|+.+|+.|+.|||++ ||||||+||+|||+ +..++++|+||
T Consensus 391 ~~~v~e~l~g~ell~ri~~~~-------~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyF 460 (612)
T KOG0603|consen 391 IYLVMELLDGGELLRRIRSKP-------EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYF 460 (612)
T ss_pred eeeeehhccccHHHHHHHhcc-------hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEe
Confidence 999999999998888877652 23378889999999999999999 99999999999999 58899999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
|.++...+. ....+-|..|.|||+.....|++++|+||||+++|+|++|+.||.....+......
T Consensus 461 G~a~~~~~~-----------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~---- 525 (612)
T KOG0603|consen 461 GFWSELERS-----------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTR---- 525 (612)
T ss_pred chhhhCchh-----------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHh----
Confidence 999865432 23345688999999999999999999999999999999999999875333111000
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
....+.. +.......+++.+|++.||.+||++.|+..
T Consensus 526 i~~~~~s----------------------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 526 IQMPKFS----------------------------ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred hcCCccc----------------------------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 0000000 223455678889999999999999999865
No 393
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.7e-30 Score=278.79 Aligned_cols=237 Identities=28% Similarity=0.346 Sum_probs=190.3
Q ss_pred eeeccceEEEEEEECCCCeEEEEEEEeeccc---cchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeec
Q 001782 707 IGQGSFGFVYRGNLGENEMAVAVKVMNLKQR---GATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYM 783 (1013)
Q Consensus 707 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 783 (1013)
||+|+||.||++.+..+++.||+|++..... ...+.+..|++++++++||||+++++.+ +.+...++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF-----QTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe-----ecCCeeEEEEecC
Confidence 6899999999999988899999999874432 2345788999999999999999999884 4568899999999
Q ss_pred cCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCC
Q 001782 784 ECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPC 863 (1013)
Q Consensus 784 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 863 (1013)
++++|.+++... ..+++.++..++.|++.|+.|+|+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 76 ~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 76 PGGELFSHLSKE------GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred CCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 999999999865 3689999999999999999999999 9999999999999999999999999998755322
Q ss_pred CCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHh
Q 001782 864 SPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEI 943 (1013)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1013)
. .......++..|+|||...+...+.++|+||||+++|++++|..||..... ... ...+
T Consensus 147 ~--------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~--------~~~~ 205 (250)
T cd05123 147 G--------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEI--------YEKI 205 (250)
T ss_pred C--------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHH--------HHHH
Confidence 1 123345678899999999888899999999999999999999999965321 010 0011
Q ss_pred hhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 001782 944 VDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTD 996 (1013)
Q Consensus 944 i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 996 (1013)
.... .... ...+..+.+++.+|+..||++||++.+
T Consensus 206 ~~~~--------~~~~----------~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 206 LKDP--------LRFP----------EFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred hcCC--------CCCC----------CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 1000 0000 011355788999999999999999954
No 394
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-31 Score=250.71 Aligned_cols=218 Identities=22% Similarity=0.312 Sum_probs=176.0
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc-ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ-RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 774 (1013)
..++......||+|+||.|-+-++..+|+..|+|.++..- ....++..+|+++..+. .+|.+|+++|.. -...
T Consensus 44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~-----~reg 118 (282)
T KOG0984|consen 44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGAL-----FREG 118 (282)
T ss_pred chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhh-----hccc
Confidence 3445556788999999999999999999999999997443 23456678888876655 799999999974 3457
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..++.||.|+ .||+.+-++.-. ..+.+++.-.-+||..+..||.|||++. .++|||+||+|||++.+|++|+|||
T Consensus 119 dvwIcME~M~-tSldkfy~~v~~--~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDF 193 (282)
T KOG0984|consen 119 DVWICMELMD-TSLDKFYRKVLK--KGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDF 193 (282)
T ss_pred cEEEeHHHhh-hhHHHHHHHHHh--cCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEccc
Confidence 7899999998 888877655322 1257899999999999999999999986 8999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCC----CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG----GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHE 930 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~ 930 (1013)
|++..+.+.. ..+-..|...|||||.+.. ..|+.++||||||+++.||.+++.||+.+...-.++.+
T Consensus 194 GIsG~L~dSi---------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkq 264 (282)
T KOG0984|consen 194 GISGYLVDSI---------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQ 264 (282)
T ss_pred ccceeehhhh---------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHH
Confidence 9997653221 1222457889999998764 36889999999999999999999999987665555554
Q ss_pred HHH
Q 001782 931 FAK 933 (1013)
Q Consensus 931 ~~~ 933 (1013)
.+.
T Consensus 265 vVe 267 (282)
T KOG0984|consen 265 VVE 267 (282)
T ss_pred Hhc
Confidence 443
No 395
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=2.2e-30 Score=275.14 Aligned_cols=222 Identities=19% Similarity=0.141 Sum_probs=175.1
Q ss_pred ccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeeccCCCHH
Q 001782 710 GSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYMECGSLE 789 (1013)
Q Consensus 710 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 789 (1013)
|.+|.||+|++..+++.||+|++.... ...+|...+....||||+++++++ ...+..++||||+++++|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYI-----VSEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhhe-----ecCCeEEEEEecCCCCCHH
Confidence 889999999999999999999986442 233455555566799999999985 3457899999999999999
Q ss_pred HHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCCCCCccc
Q 001782 790 DWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATIL 869 (1013)
Q Consensus 790 ~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 869 (1013)
+++... ..+++..+..++.|++.|++|+|+. +++||||||+||+++.++.++++|||.+......
T Consensus 74 ~~l~~~------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~------ 138 (237)
T cd05576 74 SHISKF------LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS------ 138 (237)
T ss_pred HHHHHh------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc------
Confidence 998765 3589999999999999999999999 9999999999999999999999999987654321
Q ss_pred cCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhc
Q 001782 870 ETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLL 949 (1013)
Q Consensus 870 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 949 (1013)
.....++..|+|||+..+..++.++||||+|+++|||++|+.|+...... .... ..
T Consensus 139 -----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------~~~~----~~ 194 (237)
T cd05576 139 -----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------------INTH----TT 194 (237)
T ss_pred -----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------cccc----cc
Confidence 12234567899999998888999999999999999999999887532100 0000 00
Q ss_pred cchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHH
Q 001782 950 LDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTD 996 (1013)
Q Consensus 950 ~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 996 (1013)
.+ . .......+.+++.+|++.||++||++.+
T Consensus 195 ~~--------------~--~~~~~~~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 195 LN--------------I--PEWVSEEARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred cC--------------C--cccCCHHHHHHHHHHccCCHHHhcCCCc
Confidence 00 0 0012345788999999999999999743
No 396
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=1.2e-29 Score=298.23 Aligned_cols=279 Identities=19% Similarity=0.184 Sum_probs=173.6
Q ss_pred hhccCCCCCceeeccceEEEEEEECCC----CeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeec-CCcc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGEN----EMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSS-IDFE 771 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~ 771 (1013)
..++|++.++||+|+||.||+|++..+ +..||+|++..... .+....| .++...+.++..++..+.. ....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 567899999999999999999999888 88999998753221 1111121 1122222222222221111 1013
Q ss_pred ccceEEEEEeeccCCCHHHHhhcccccc--------------ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQL--------------EVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLK 837 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk 837 (1013)
.+...++||||+++++|.+++....... .........+..++.|++.||+|||++ +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 5577899999999999999987542110 001122345678999999999999999 99999999
Q ss_pred CCceEecC-CCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCC----------------------C
Q 001782 838 PSNVLLDH-DMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG----------------------D 894 (1013)
Q Consensus 838 p~NIll~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~ 894 (1013)
|+|||++. ++.+||+|||+|+.+.... ........+++.|+|||.+... .
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~-------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~ 355 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGI-------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLN 355 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccc-------ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhcccc
Confidence 99999986 5799999999998553221 1123446789999999965432 2
Q ss_pred CCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHH
Q 001782 895 MSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLV 974 (1013)
Q Consensus 895 ~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~ 974 (1013)
++.++||||+||++|||+++..|++.. ...+....... ..+...+.... . + +. ........+.......
T Consensus 356 ~~~k~DVwSlGviL~el~~~~~~~~~~---~~~~~~~l~~~-~~~~~~~~~~~-~--~--~~--~~~~~~~~~~~d~~~~ 424 (566)
T PLN03225 356 LPDRFDIYSAGLIFLQMAFPNLRSDSN---LIQFNRQLKRN-DYDLVAWRKLV-E--P--RA--SPDLRRGFEVLDLDGG 424 (566)
T ss_pred CCCCcccHHHHHHHHHHHhCcCCCchH---HHHHHHHHHhc-CCcHHHHHHhh-c--c--cc--chhhhhhhhhccccch
Confidence 344679999999999999977665421 00111111100 00111110000 0 0 00 0000000111111223
Q ss_pred HHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 975 AIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 975 ~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
...+++.+|++.||++|||+.|+++.
T Consensus 425 ~~~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 425 AGWELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhCC
Confidence 45689999999999999999999873
No 397
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-31 Score=282.58 Aligned_cols=199 Identities=26% Similarity=0.393 Sum_probs=176.2
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec---cccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK---QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
+++++..||-||||.|=+++.......+|+|+++.. .....+.+..|-.+|...+.|.||++|.. +.+..+.
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrT-----frd~kyv 495 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRT-----FRDSKYV 495 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHH-----hccchhh
Confidence 445567899999999999998766656888887633 23334567889999999999999999987 5667899
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
|+.||-|-||.++..++.. +.++...+..++.-+++|++|||++ +||+||+||+|.++|.+|-+||.|||+
T Consensus 496 YmLmEaClGGElWTiLrdR------g~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGF 566 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDR------GSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGF 566 (732)
T ss_pred hhhHHhhcCchhhhhhhhc------CCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhh
Confidence 9999999999999999987 6789999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
|+.+. ...+...++||+.|.|||++.....+.++|.||+|+++||+++|.+||...
T Consensus 567 AKki~---------~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~ 622 (732)
T KOG0614|consen 567 AKKIG---------SGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV 622 (732)
T ss_pred HHHhc---------cCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence 99764 344567899999999999999999999999999999999999999999874
No 398
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.1e-30 Score=258.90 Aligned_cols=242 Identities=22% Similarity=0.326 Sum_probs=198.0
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec---cccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK---QRGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 772 (1013)
..++|...++||+|+|+.|..++..++.+.+|+|+++.+ .++..+-.+.|-.+..+. +||.+|.+..+ ++.
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc-----fqt 322 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC-----FQT 322 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh-----hcc
Confidence 356899999999999999999999999999999999743 334445567788888776 69999998887 566
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
+...++|.||+.||+|--.++++ ..++++.+..+...|.-||.|||++ ||++||+|.+|||+|..|++|++
T Consensus 323 esrlffvieyv~ggdlmfhmqrq------rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghiklt 393 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQ------RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLT 393 (593)
T ss_pred cceEEEEEEEecCcceeeehhhh------hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeec
Confidence 78899999999999998777766 5799999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCc--CCCCccHHH
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNM--FNDGLTLHE 930 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~--~~~~~~~~~ 930 (1013)
|+|+++.-- ........++||+.|.|||++.+..|...+|.|++|++++||+.|+.||+-. .+.+..-..
T Consensus 394 dygmcke~l--------~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~nted 465 (593)
T KOG0695|consen 394 DYGMCKEGL--------GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTED 465 (593)
T ss_pred ccchhhcCC--------CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhH
Confidence 999987421 2334466789999999999999999999999999999999999999999753 222222222
Q ss_pred HH-----Hh--hC----ChhHHHhhhhhhccchhhhhccCC
Q 001782 931 FA-----KM--AL----PEKVMEIVDPLLLLDLEARASNCG 960 (1013)
Q Consensus 931 ~~-----~~--~~----~~~~~~~i~~~l~~~~~~R~~~~~ 960 (1013)
+. .. .+ +-.+..+++..+.+||.+|.....
T Consensus 466 ylfqvilekqiriprslsvkas~vlkgflnkdp~erlgc~~ 506 (593)
T KOG0695|consen 466 YLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRP 506 (593)
T ss_pred HHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhcCCCc
Confidence 21 11 12 234667778888888888876543
No 399
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=2.7e-30 Score=246.81 Aligned_cols=276 Identities=20% Similarity=0.298 Sum_probs=205.6
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCC-CCccceEEEEeecCCccccce
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIR-HRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 775 (1013)
..++|++.+++|+|.|++||.|....+.++++||++++.. .+.+.+|+.+++.+. ||||+.++++..++ ....
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp---~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDP---ESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCc---cccC
Confidence 3568999999999999999999998889999999998553 367899999999996 99999999997543 3355
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC-CceEEccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD-MVAHVGDF 854 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DF 854 (1013)
..+|+||+.+.+...+-. .++..++..++.+++.||.|+|+. ||.|||+||.||++|.. ...+|+|+
T Consensus 110 paLiFE~v~n~Dfk~ly~---------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDW 177 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYP---------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDW 177 (338)
T ss_pred chhHhhhhccccHHHHhh---------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeec
Confidence 679999999877766553 466678899999999999999999 99999999999999865 57999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG-GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
|+|.++-+...... .+.+..|.-||.+-. ..|+.+-|+|||||++..|+..+.||..-.....++..+++
T Consensus 178 GLAEFYHp~~eYnV---------RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIak 248 (338)
T KOG0668|consen 178 GLAEFYHPGKEYNV---------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAK 248 (338)
T ss_pred chHhhcCCCceeee---------eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHH
Confidence 99998866544332 345678889998765 45888999999999999999999999776555555555555
Q ss_pred hhCChhHHHhhhh-hhccchhhhhccCCCCchhHHH------HHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 934 MALPEKVMEIVDP-LLLLDLEARASNCGSHRTEIAK------IEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 934 ~~~~~~~~~~i~~-~l~~~~~~R~~~~~~~~~~~~~------~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
....+++...+.+ .+..||+-.--...-.+..... ..-..++..+++.+.+.+|-.+||||.|.++
T Consensus 249 VLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 249 VLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 4444443333322 1112221100000000000000 0111245678899999999999999999875
No 400
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.9e-31 Score=256.78 Aligned_cols=205 Identities=24% Similarity=0.350 Sum_probs=171.7
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec--cccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK--QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
+.+..+.||.|+||.||.+.+..+++.||+|.+... .-...+++.+|++++..++|.||+..+++........-.+.|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 455678999999999999999999999999988622 223457788999999999999999999886544334445678
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+++|.|. .+|...+-.. ..++...+.-+..||++||.|||+. +|.||||||.|.+|..+...||||||+|
T Consensus 134 V~TELmQ-SDLHKIIVSP------Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLA 203 (449)
T KOG0664|consen 134 VLTELMQ-SDLHKIIVSP------QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLA 203 (449)
T ss_pred HHHHHHH-hhhhheeccC------CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccc
Confidence 8999988 7888877654 4688888999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCc
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNM 921 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~ 921 (1013)
+..+.+... ..+..+-|..|+|||++.+. .|+.+.||||.||++.|++.++..|+..
T Consensus 204 Rvee~d~~~-------hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq 261 (449)
T KOG0664|consen 204 RTWDQRDRL-------NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAA 261 (449)
T ss_pred cccchhhhh-------hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhcc
Confidence 976543322 23445568999999999986 5899999999999999999999988763
No 401
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=7.6e-29 Score=264.42 Aligned_cols=239 Identities=28% Similarity=0.388 Sum_probs=191.2
Q ss_pred cceEEEEEEECCCCeEEEEEEEeeccccc-hhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeeccCCCHH
Q 001782 711 SFGFVYRGNLGENEMAVAVKVMNLKQRGA-TKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYMECGSLE 789 (1013)
Q Consensus 711 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 789 (1013)
+||.||+|++.++++.||+|++....... .+.+.+|++.+++++|++++++++++. .....++++||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFE-----DEDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhhee-----eCCEEEEEEeCCCCCCHH
Confidence 58999999999889999999997655444 678999999999999999999999864 337789999999989999
Q ss_pred HHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCCCCCccc
Q 001782 790 DWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATIL 869 (1013)
Q Consensus 790 ~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 869 (1013)
+++... ..+++.+++.++.+++.+++|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 76 ~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----- 141 (244)
T smart00220 76 DLLKKR------GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----- 141 (244)
T ss_pred HHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-----
Confidence 999765 2378999999999999999999999 99999999999999999999999999998654321
Q ss_pred cCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhc
Q 001782 870 ETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLL 949 (1013)
Q Consensus 870 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 949 (1013)
......++..|+|||...+..++.++||||+|+++|++++|..||....... . ..+.+. .
T Consensus 142 ----~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~----~---------~~~~~~---~ 201 (244)
T smart00220 142 ----LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL----E---------LFKKIG---K 201 (244)
T ss_pred ----ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH----H---------HHHHHh---c
Confidence 2334567889999999988889999999999999999999999986531110 0 011110 0
Q ss_pred cchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 950 LDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 950 ~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..+... ......+..+.+++.+|+..+|++||++.++++
T Consensus 202 ~~~~~~-----------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 202 PKPPFP-----------PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred cCCCCc-----------cccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 000000 000003456888999999999999999999986
No 402
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=7e-30 Score=286.74 Aligned_cols=246 Identities=26% Similarity=0.356 Sum_probs=186.0
Q ss_pred CCCCceeeccceE-EEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccceEEEE
Q 001782 702 SSSNMIGQGSFGF-VYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDFKAIV 779 (1013)
Q Consensus 702 ~~~~~lg~G~~g~-V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv 779 (1013)
.-.+++|.|+.|+ ||+|... ++.||||.+-.+. .+...+|+..++.- +||||+++++. ..+..+.|++
T Consensus 512 ~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~-----E~d~qF~YIa 581 (903)
T KOG1027|consen 512 SPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCS-----EQDRQFLYIA 581 (903)
T ss_pred ccHHHcccCCCCcEEEEEeeC--CceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEee-----ccCCceEEEE
Confidence 3346789999985 7999984 7799999885332 24567999999988 59999999987 5667899999
Q ss_pred EeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC---C--CceEEccc
Q 001782 780 YEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH---D--MVAHVGDF 854 (1013)
Q Consensus 780 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~--~~~kl~DF 854 (1013)
.|.|. .+|+++++...... ........+.+..|++.||++||+. +||||||||.||||+. + .+++|+||
T Consensus 582 lELC~-~sL~dlie~~~~d~--~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDf 655 (903)
T KOG1027|consen 582 LELCA-CSLQDLIESSGLDV--EMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDF 655 (903)
T ss_pred ehHhh-hhHHHHHhccccch--hhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccc
Confidence 99999 89999999852111 1112245678899999999999998 9999999999999976 3 47999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhC-CCCCCCcCCCCccHHHHHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTR-RRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G-~~pf~~~~~~~~~~~~~~~ 933 (1013)
|+++.+..+...- .......||.+|+|||++....-+.++||||+||++|+.++| .+||.+....+..+..
T Consensus 656 glsKkl~~~~sS~-----~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~--- 727 (903)
T KOG1027|consen 656 GLSKKLAGGKSSF-----SRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT--- 727 (903)
T ss_pred ccccccCCCcchh-----hcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc---
Confidence 9999887654321 124567799999999999999889999999999999999995 9999864221111000
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVV 998 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 998 (1013)
.. ..+. .+....++ ...++|.+|+++||..||+|.+|+
T Consensus 728 ~~-----~~L~--------------------~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 728 GN-----YTLV--------------------HLEPLPDC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred Cc-----ccee--------------------eeccCchH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 00 0000 00000111 467899999999999999999996
No 403
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=1.5e-28 Score=281.00 Aligned_cols=276 Identities=17% Similarity=0.187 Sum_probs=183.2
Q ss_pred hhhccCCCCCceeeccceEEEEEEEC----------------CCCeEEEEEEEeeccccchh--------------HHHH
Q 001782 696 KATNDFSSSNMIGQGSFGFVYRGNLG----------------ENEMAVAVKVMNLKQRGATK--------------SFVA 745 (1013)
Q Consensus 696 ~~~~~y~~~~~lg~G~~g~V~~~~~~----------------~~~~~vavK~~~~~~~~~~~--------------~~~~ 745 (1013)
...++|++.++||+|+||+||+|.+. ..++.||||.+........+ ....
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 34679999999999999999999752 23567999998754332222 2345
Q ss_pred HHHHHhcCCCCc-----cceEEEEeecCC---ccccceEEEEEeeccCCCHHHHhhccccc------------------c
Q 001782 746 ECEALRNIRHRN-----LIKIITVCSSID---FEEVDFKAIVYEYMECGSLEDWLHQSNDQ------------------L 799 (1013)
Q Consensus 746 E~~~l~~l~h~n-----iv~~~~~~~~~~---~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------~ 799 (1013)
|+.++.+++|.+ +++++++|.... ....+..++||||+++++|.++++..... .
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 677777776654 467777765321 11235689999999999999998753210 0
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccc
Q 001782 800 EVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIK 879 (1013)
Q Consensus 800 ~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 879 (1013)
....+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.+||+|||++..+..... .......
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-------~~~~~g~ 371 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-------FNPLYGM 371 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-------cCccccC
Confidence 112456788999999999999999999 999999999999999999999999999975432111 0111233
Q ss_pred cccccccccccCCCCC----------------------CcccchHHHHHHHHHHHhCCC-CCCCcCCCCccHHHHHHhhC
Q 001782 880 GTVGYVAPEYGMGGDM----------------------SATGDVYSFGILLLEMFTRRR-PTDNMFNDGLTLHEFAKMAL 936 (1013)
Q Consensus 880 gt~~y~aPE~~~~~~~----------------------~~~~DIwSlG~il~ell~G~~-pf~~~~~~~~~~~~~~~~~~ 936 (1013)
+++.|+|||.+..... ..+.||||+||++|+|++|.. ||.....-..... ..
T Consensus 372 ~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~-----~~ 446 (507)
T PLN03224 372 LDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELR-----QY 446 (507)
T ss_pred CCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHh-----hc
Confidence 4789999998754321 124799999999999999875 6653211100000 00
Q ss_pred ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCC---CCCCCHHHHHH
Q 001782 937 PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESP---SERIQMTDVVA 999 (1013)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP---~~RPs~~evl~ 999 (1013)
......+.. . ... ...............+++.+++..+| .+|+|++|+++
T Consensus 447 ~~~~~~~r~-~----~~~--------~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 447 DNDLNRWRM-Y----KGQ--------KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cchHHHHHh-h----ccc--------CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 111111100 0 000 00111122334567888889998765 78999999986
No 404
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.1e-28 Score=266.82 Aligned_cols=215 Identities=24% Similarity=0.324 Sum_probs=177.3
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
.-|..++.||-|+||+|.++....+...||+|.++..+ +......+.|.+||..-+.+-||++|-. |.+.+.
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS-----FQDkdn 703 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS-----FQDKDN 703 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE-----eccCCc
Confidence 44677889999999999999998888899999987432 2334557889999999999999999977 567799
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
+|+||+|++||++-.++-+. +-|.+.-++.++..++.|+++.|.. |+|||||||+|||||.+|++||+|||
T Consensus 704 LYFVMdYIPGGDmMSLLIrm------gIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFG 774 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLIRM------GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 774 (1034)
T ss_pred eEEEEeccCCccHHHHHHHh------ccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeecc
Confidence 99999999999999988776 5788889999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCC--C------CCc---ccc-----------------------CCCCCcccccccccccccccCCCCCCcccch
Q 001782 856 LARFLPPC--S------PAT---ILE-----------------------TPSSSTGIKGTVGYVAPEYGMGGDMSATGDV 901 (1013)
Q Consensus 856 ~a~~~~~~--~------~~~---~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DI 901 (1013)
++.-+.-. . ... .++ ........+||+.|+|||++....|+..+|.
T Consensus 775 LCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdw 854 (1034)
T KOG0608|consen 775 LCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDW 854 (1034)
T ss_pred ccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchh
Confidence 97532110 0 000 000 0001224569999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCcCCCCcc
Q 001782 902 YSFGILLLEMFTRRRPTDNMFNDGLT 927 (1013)
Q Consensus 902 wSlG~il~ell~G~~pf~~~~~~~~~ 927 (1013)
||.|||+|||+.|++||......+.+
T Consensus 855 ws~gvil~em~~g~~pf~~~tp~~tq 880 (1034)
T KOG0608|consen 855 WSVGVILYEMLVGQPPFLADTPGETQ 880 (1034)
T ss_pred hHhhHHHHHHhhCCCCccCCCCCcce
Confidence 99999999999999999875554443
No 405
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=4.1e-29 Score=268.41 Aligned_cols=200 Identities=26% Similarity=0.393 Sum_probs=174.0
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--------ccchhHHHHHHHHHhcCC---CCccceEEEEe
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--------RGATKSFVAECEALRNIR---HRNLIKIITVC 765 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---h~niv~~~~~~ 765 (1013)
...+|...+.+|+|+||.||.|.++++...|+||.+..++ +...-....|+.||..++ |+||++++++
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf- 637 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF- 637 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe-
Confidence 3457999999999999999999999999999999986432 112234678999999997 9999999999
Q ss_pred ecCCccccceEEEEEeecc-CCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEec
Q 001782 766 SSIDFEEVDFKAIVYEYME-CGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLD 844 (1013)
Q Consensus 766 ~~~~~~~~~~~~lv~e~~~-~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~ 844 (1013)
|++++++|++||... +-+|.++|+.. ..+++.++..|+.||+.|+++||+. ||||||||-+||.++
T Consensus 638 ----FEddd~yyl~te~hg~gIDLFd~IE~k------p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd 704 (772)
T KOG1152|consen 638 ----FEDDDYYYLETEVHGEGIDLFDFIEFK------PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVD 704 (772)
T ss_pred ----eecCCeeEEEecCCCCCcchhhhhhcc------CccchHHHHHHHHHHHhcccccccc---CceecccccccEEEe
Confidence 678899999999764 56899999987 5799999999999999999999999 999999999999999
Q ss_pred CCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCC-CcccchHHHHHHHHHHHhCCCCCCC
Q 001782 845 HDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDM-SATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 845 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
.+|-+||+|||.|.+... .....++||..|.|||++.+.+| +..-|||++|+++|.++....||..
T Consensus 705 ~~g~~klidfgsaa~~ks----------gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 705 SNGFVKLIDFGSAAYTKS----------GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred cCCeEEEeeccchhhhcC----------CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 999999999999975432 22455789999999999999887 4568999999999999999999854
No 406
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=2.5e-29 Score=266.47 Aligned_cols=277 Identities=18% Similarity=0.264 Sum_probs=205.8
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCC------CCccceEEEEeecCCc
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIR------HRNLIKIITVCSSIDF 770 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~ 770 (1013)
...+|.+....|+|-|++|.+|.+...+..||||++..... ..+.=..|+++|+++. --|+++++.. |
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~-----F 503 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRH-----F 503 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHH-----h
Confidence 45689999999999999999999998899999999984422 2344568999999995 2467777776 5
Q ss_pred cccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC-Cce
Q 001782 771 EEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD-MVA 849 (1013)
Q Consensus 771 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~ 849 (1013)
...+++|+|+|.+. .+|.++++..... ..+....+..++.|+..||..|... ||+|.||||+||||.+. ...
T Consensus 504 ~hknHLClVFE~Ls-lNLRevLKKyG~n---vGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iL 576 (752)
T KOG0670|consen 504 KHKNHLCLVFEPLS-LNLREVLKKYGRN---VGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNIL 576 (752)
T ss_pred hhcceeEEEehhhh-chHHHHHHHhCcc---cceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCccee
Confidence 56799999999998 8999999987553 4788889999999999999999998 99999999999999876 478
Q ss_pred EEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCcc-H
Q 001782 850 HVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLT-L 928 (1013)
Q Consensus 850 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~-~ 928 (1013)
||||||.|...... ..+++.-+..|.|||++.|-+|+...|+||.||++||+.||+..|.+..+..+. +
T Consensus 577 KLCDfGSA~~~~en----------eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl 646 (752)
T KOG0670|consen 577 KLCDFGSASFASEN----------EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRL 646 (752)
T ss_pred eeccCccccccccc----------cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHH
Confidence 99999999865432 234455677899999999999999999999999999999999999875443221 1
Q ss_pred HHHHHhhCChhHH---Hhhhh------------------------hhccchh----hhhccCCCCchhHHHHHHHHHHHH
Q 001782 929 HEFAKMALPEKVM---EIVDP------------------------LLLLDLE----ARASNCGSHRTEIAKIEECLVAIV 977 (1013)
Q Consensus 929 ~~~~~~~~~~~~~---~~i~~------------------------~l~~~~~----~R~~~~~~~~~~~~~~~~~~~~l~ 977 (1013)
.--....+|..+. .++++ +....|. .+.-.+... .........++.
T Consensus 647 ~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~---~deq~~~~~~~r 723 (752)
T KOG0670|consen 647 FMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRL---PDEQPKIVQQLR 723 (752)
T ss_pred HHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCC---CchhHHHHHHHH
Confidence 1111112222110 11111 1111111 111111000 111123456788
Q ss_pred HHhhhcccCCCCCCCCHHHHHH
Q 001782 978 RIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 978 ~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+|+.+|+..||++|.|..++++
T Consensus 724 dLLdkml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 724 DLLDKMLILDPEKRITVNQALK 745 (752)
T ss_pred HHHHHHhccChhhcCCHHHHhc
Confidence 9999999999999999999875
No 407
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.6e-28 Score=240.68 Aligned_cols=255 Identities=18% Similarity=0.236 Sum_probs=189.9
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcC-CCCccceEEEEeecCCccccceE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.+.|.+.+.+|+|.||.+-+++++++...+|+|.+... ....++|.+|...--.+ .|.||+.-|++. ++..+.+
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d~Y 97 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSDAY 97 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHH----hhcCceE
Confidence 35799999999999999999999999999999998633 33457788888765555 589999988875 5666899
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEec--CCCceEEccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLD--HDMVAHVGDF 854 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~DF 854 (1013)
++++||++.|+|..-+... .+.+....+++.|++.|+.|||++ ++||||||.+||||- +..++|+|||
T Consensus 98 vF~qE~aP~gdL~snv~~~-------GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAA-------GIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred EEeeccCccchhhhhcCcc-------cccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeec
Confidence 9999999999999888764 678888999999999999999999 999999999999994 3358999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCC-----CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHH
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG-----DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLH 929 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~ 929 (1013)
|.++..+.. .....-+..|.|||..... ...+.+|||.||+++|.+++|..||+.....+..+.
T Consensus 168 G~t~k~g~t-----------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~ 236 (378)
T KOG1345|consen 168 GLTRKVGTT-----------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYW 236 (378)
T ss_pred ccccccCce-----------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHH
Confidence 998744311 1222345779999975442 357789999999999999999999987555555544
Q ss_pred HHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 930 EFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 930 ~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
+|..... +....-| .......+.+.++.++-+.++|++|--..++.++.
T Consensus 237 ~~~~w~~---------rk~~~~P--------------~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 237 EWEQWLK---------RKNPALP--------------KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred HHHHHhc---------ccCccCc--------------hhhcccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 4432211 0000000 01112233456677777788888875544444443
No 408
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=4e-28 Score=244.39 Aligned_cols=275 Identities=20% Similarity=0.237 Sum_probs=203.0
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec--cccchhHHHHHHHHHhcCCCCccceEEEEeecCCc-cccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK--QRGATKSFVAECEALRNIRHRNLIKIITVCSSIDF-EEVD 774 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 774 (1013)
..+|.-.+.+|.|.- .|..|.+.-.+++||+|..... .....++..+|...+..+.|+||++++.+++.... ++..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 357888899999998 8888989888999999987522 22345678899999999999999999999865322 3345
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
..|+|||+|. .+|.+.+.. .++-+....|..|++.|++|||+. ||+|||+||+||++..++.+||.||
T Consensus 95 e~y~v~e~m~-~nl~~vi~~--------elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~df 162 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVILM--------ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDF 162 (369)
T ss_pred hHHHHHHhhh-hHHHHHHHH--------hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccc
Confidence 6899999999 899998873 356678899999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 855 GLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 855 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
|+|+..+.. -..+..+.|..|+|||++.+..+...+||||.||++.||++|+..|.+ ...+.+|.+.
T Consensus 163 g~ar~e~~~---------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g----~d~idQ~~ki 229 (369)
T KOG0665|consen 163 GLARTEDTD---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG----KDHIDQWNKI 229 (369)
T ss_pred hhhcccCcc---------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC----chHHHHHHHH
Confidence 999854321 135677889999999999998899999999999999999999999874 2233333222
Q ss_pred h----CC-hh--------HHHhhh---hhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 001782 935 A----LP-EK--------VMEIVD---PLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVV 998 (1013)
Q Consensus 935 ~----~~-~~--------~~~~i~---~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 998 (1013)
. -+ +. .+..+. +-......++... ..+....+...-......+++.+|+..||++|.++++++
T Consensus 230 ~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD-~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL 308 (369)
T KOG0665|consen 230 IEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPD-SLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDAL 308 (369)
T ss_pred HHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCc-ccccccccCCccchHHHHHHHHHhhccChhhcccHHHHh
Confidence 1 01 11 111111 0000111111110 111111111112234567899999999999999999998
Q ss_pred H
Q 001782 999 A 999 (1013)
Q Consensus 999 ~ 999 (1013)
.
T Consensus 309 ~ 309 (369)
T KOG0665|consen 309 R 309 (369)
T ss_pred c
Confidence 5
No 409
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=8.4e-29 Score=270.59 Aligned_cols=202 Identities=26% Similarity=0.401 Sum_probs=179.7
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
..++|+..+++|.|.||.||+|++..+++..|+|+++.......+-+++|+-+++..+||||+.++|-+ ...+..
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsy-----lr~dkl 87 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSY-----LRRDKL 87 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhh-----hhhcCc
Confidence 456899999999999999999999999999999999988777778889999999999999999999984 455789
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
|++||||.+|+|++.-+-. +.+++.++..+++...+|++|||+. |-+|||||-.||++++.|.+|++|||.
T Consensus 88 wicMEycgggslQdiy~~T------gplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgv 158 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYHVT------GPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGV 158 (829)
T ss_pred EEEEEecCCCcccceeeec------ccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCc
Confidence 9999999999999987765 6899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM---GGDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
+..+. ....+...+.||+.|||||+.. .+.|...+|||+.|+...|+-.-++|-.+
T Consensus 159 saqit--------ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfd 217 (829)
T KOG0576|consen 159 SAQIT--------ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFD 217 (829)
T ss_pred hhhhh--------hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccc
Confidence 87543 3344566789999999999743 46789999999999999999988777543
No 410
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=4.4e-27 Score=246.45 Aligned_cols=287 Identities=26% Similarity=0.324 Sum_probs=209.4
Q ss_pred hhhhhccCCCCCceeeccceEEEEEEECC---CCeEEEEEEEeeccccchhHHHHHHHHHhcC-CCCccceEEEEeecCC
Q 001782 694 LSKATNDFSSSNMIGQGSFGFVYRGNLGE---NEMAVAVKVMNLKQRGATKSFVAECEALRNI-RHRNLIKIITVCSSID 769 (1013)
Q Consensus 694 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 769 (1013)
+....+.|..+++||+|.|++||+|.+.. .++.||+|.+...+. ..++.+|+++|..+ .+.||+++.++
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~----- 103 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGC----- 103 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhh-----
Confidence 44556789999999999999999999976 788999999875543 46789999999999 58999999998
Q ss_pred ccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC-CCc
Q 001782 770 FEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH-DMV 848 (1013)
Q Consensus 770 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~ 848 (1013)
+..++..++|+||++.....++... ++..++..+++.+..||+++|.. |||||||||+|++.+. .+.
T Consensus 104 ~rnnd~v~ivlp~~~H~~f~~l~~~---------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~r 171 (418)
T KOG1167|consen 104 FRNNDQVAIVLPYFEHDRFRDLYRS---------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQR 171 (418)
T ss_pred hccCCeeEEEecccCccCHHHHHhc---------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCC
Confidence 5677899999999998888888754 56789999999999999999999 9999999999999975 467
Q ss_pred eEEccccccccCCCCCCC-------------------------------c-----cccCCCCCcccccccccccccccCC
Q 001782 849 AHVGDFGLARFLPPCSPA-------------------------------T-----ILETPSSSTGIKGTVGYVAPEYGMG 892 (1013)
Q Consensus 849 ~kl~DFG~a~~~~~~~~~-------------------------------~-----~~~~~~~~~~~~gt~~y~aPE~~~~ 892 (1013)
-.|+|||+|...+..... . ............||++|+|||++..
T Consensus 172 g~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k 251 (418)
T KOG1167|consen 172 GVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR 251 (418)
T ss_pred ceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh
Confidence 889999999832211100 0 0011112334569999999999876
Q ss_pred -CCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHH---hhhh--hhc-----cchhhhhcc---
Q 001782 893 -GDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVME---IVDP--LLL-----LDLEARASN--- 958 (1013)
Q Consensus 893 -~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~i~~--~l~-----~~~~~R~~~--- 958 (1013)
..-++++||||.|+++..+++++.||....++...+.+.+....+..++. ...+ .+. ..++.|...
T Consensus 252 ~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~ 331 (418)
T KOG1167|consen 252 CPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETL 331 (418)
T ss_pred ccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhcc
Confidence 45788999999999999999999999887666665555544433332221 1111 001 111111110
Q ss_pred ----CCCCc---hhHHHHHHH-HHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 959 ----CGSHR---TEIAKIEEC-LVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 959 ----~~~~~---~~~~~~~~~-~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
+...+ .......++ +..+++++.+|+..||.+|.||+|+++
T Consensus 332 ~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 332 HIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 00000 011122222 237899999999999999999999875
No 411
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=1.2e-28 Score=254.03 Aligned_cols=398 Identities=21% Similarity=0.226 Sum_probs=276.1
Q ss_pred CCCCccccccccccceecccccccccCCCCccCCCCcceeeecccccCCCCCCccccccccceeeccc-ccccCCCcchh
Q 001782 163 QIPPDIGYSWLKLEFLSLRDNLLAGQLAPSIGNISNLQVLSIGENRLSGRLPDSLGQLRSLYYLSISE-NAFSGMFPSSI 241 (1013)
Q Consensus 163 ~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~~ 241 (1013)
+||.+++ ..-.+++|..|+|+.+.+..|+.+++|+.||||+|.|+.+-|++|.++.+|..|-+.+ |+|+......|
T Consensus 60 eVP~~LP---~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F 136 (498)
T KOG4237|consen 60 EVPANLP---PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAF 136 (498)
T ss_pred cCcccCC---CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHh
Confidence 5666555 3467788888888888888899999999999999999988899999998887777766 88886666788
Q ss_pred ccCCccceeeccCCccCCCCCCCcCCCCCCCcEEEeeeccccccCCCCCCCCCCCceEEcccCccc------------cc
Q 001782 242 FNISSLESISLLGNRLEGSLPVNIGFSLPNLENLSVRQNNYTGSLPHSLSNASNLRLLDFSLNHFS------------GQ 309 (1013)
Q Consensus 242 ~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~------------~~ 309 (1013)
++|.+|+.|.+.-|++. .++...+..+++|..|.+..|.+..+--.+|..+.+++.+.+..|.+- ..
T Consensus 137 ~gL~slqrLllNan~i~-Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~ 215 (498)
T KOG4237|consen 137 GGLSSLQRLLLNANHIN-CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAM 215 (498)
T ss_pred hhHHHHHHHhcChhhhc-chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhh
Confidence 88999999999999998 777777778889999999999888443448888899999998888732 22
Q ss_pred ccccccCCCCccccccccCcCCCCCCCChhhhhhcccccccccccccccccCCccchhhhcchhhHHHHhccchhHHhhc
Q 001782 310 VKIDFNRLPNLFRLSFSKNNLGTGAIGDLDFIAHLTNCSKLEALGLDTNIFGGVLPLSIANLSSTIILFSMGLNQIYVKN 389 (1013)
Q Consensus 310 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~ 389 (1013)
.+..++.........+..+++..+....+ ... +..+.+--.+..... ...+...|+.
T Consensus 216 ~~ietsgarc~~p~rl~~~Ri~q~~a~kf--~c~---~esl~s~~~~~d~~d------------------~~cP~~cf~~ 272 (498)
T KOG4237|consen 216 NPIETSGARCVSPYRLYYKRINQEDARKF--LCS---LESLPSRLSSEDFPD------------------SICPAKCFKK 272 (498)
T ss_pred chhhcccceecchHHHHHHHhcccchhhh--hhh---HHhHHHhhccccCcC------------------CcChHHHHhh
Confidence 23334444444444444444443322211 111 001100000011111 1123456899
Q ss_pred ccccceeecccccccCCcccccCCCCCCCEEEccCCccCccCCccccccCccCEEEcCCCcccCCCCcccccCcccceee
Q 001782 390 LVNLNGFGLEYNQLTGPIPHAIGELRNLQVLDLHHNNLDGHIPESLGNLTILNSLDLGFNKLRGHVPSSLGNCQNLMLLS 469 (1013)
Q Consensus 390 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 469 (1013)
+++|+.|+|++|+|+++-+.+|.++..++.|.|..|+|..+....|.++..|++|+|++|+|+..-|.+|..+..|.+|+
T Consensus 273 L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~ 352 (498)
T KOG4237|consen 273 LPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLN 352 (498)
T ss_pred cccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeee
Confidence 99999999999999999999999999999999999999988888899999999999999999999999999999999999
Q ss_pred cccccccccCCc-hhhc--------------ccchhhhhccCCCeec---ccCCccccC---------cCCCc-EEEccC
Q 001782 470 VSNNKLTGALPP-QILG--------------IVTLSILLDLSGNLLT---GSIPAEVGN---------LKNLV-QLGLSE 521 (1013)
Q Consensus 470 L~~N~l~~~~p~-~~~~--------------~~~~l~~L~Ls~N~l~---~~~~~~~~~---------l~~L~-~L~Ls~ 521 (1013)
|-.|.+...--- ++.. ....++.+.++.+.+. ..-|++.+. .+-+. ...-|+
T Consensus 353 l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSn 432 (498)
T KOG4237|consen 353 LLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSN 432 (498)
T ss_pred hccCcccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcc
Confidence 999987521111 1111 0122333344433322 111222111 11121 222333
Q ss_pred CCCCCCCccccccccccccccccccccccccCccccccCCCCeEeccccccccccccccccccccceeecCCc
Q 001782 522 NRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRNNLSGQIPEFLENLSFLEYLNLSYN 594 (1013)
Q Consensus 522 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 594 (1013)
+.++ .+|..+. ..-.+|++.+|.++ .+|.. .+.+| .+|+|+|+++..-...|.++++|.+|-||+|
T Consensus 433 k~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 433 KLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred cchh-hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 3333 3443332 23467899999998 67776 66778 8999999998777778889999999888876
No 412
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=1e-25 Score=234.53 Aligned_cols=211 Identities=29% Similarity=0.528 Sum_probs=181.0
Q ss_pred eeeccceEEEEEEECCCCeEEEEEEEeecccc-chhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeeccC
Q 001782 707 IGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG-ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYMEC 785 (1013)
Q Consensus 707 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 785 (1013)
||+|++|.||++....+++.+++|++...... ..+.+.+|++.++.++|++++++++++. .....++++||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE-----DENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeee-----cCCeEEEEEecCCC
Confidence 68999999999999888999999999755432 3467899999999999999999999964 33788999999999
Q ss_pred CCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC-CCceEEccccccccCCCCC
Q 001782 786 GSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH-DMVAHVGDFGLARFLPPCS 864 (1013)
Q Consensus 786 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~a~~~~~~~ 864 (1013)
++|.+++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+.......
T Consensus 76 ~~l~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 76 GSLKDLLKENE-----GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred CcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 99999987642 2578999999999999999999999 9999999999999999 8999999999997654321
Q ss_pred CCccccCCCCCcccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHh
Q 001782 865 PATILETPSSSTGIKGTVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEI 943 (1013)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1013)
. ......+...|++||..... .++.++|+|++|++++++
T Consensus 148 ~--------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------- 187 (215)
T cd00180 148 S--------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------- 187 (215)
T ss_pred c--------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------
Confidence 1 12334577899999998877 888999999999999999
Q ss_pred hhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 944 VDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 944 i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 ------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 135678889999999999999999864
No 413
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=2e-25 Score=235.08 Aligned_cols=200 Identities=32% Similarity=0.497 Sum_probs=172.2
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc-chhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEE
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG-ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIV 779 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 779 (1013)
|++.+.||+|++|.||+|....+++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++. .....+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-----~~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE-----DPEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee-----cCCceEEE
Confidence 56778999999999999999988899999999865544 5678899999999999999999999864 33678999
Q ss_pred EeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccccc
Q 001782 780 YEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARF 859 (1013)
Q Consensus 780 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 859 (1013)
+||+++++|.+++..... .+++..+..++.+++.++.+||+. +++|+|++|+||+++.++.++|+|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 76 MEYCEGGDLFDYLRKKGG-----KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred EeccCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence 999999999999987521 178899999999999999999999 999999999999999999999999999886
Q ss_pred CCCCCCCccccCCCCCccccccccccccccc-CCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001782 860 LPPCSPATILETPSSSTGIKGTVGYVAPEYG-MGGDMSATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
..... ........++..|++||.. ....++.++|||+||+++|||++|+.||..
T Consensus 148 ~~~~~-------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 148 IHRDL-------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ecCcc-------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 54322 0022345677899999998 667788899999999999999999999965
No 414
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=4.8e-27 Score=242.31 Aligned_cols=271 Identities=23% Similarity=0.258 Sum_probs=157.6
Q ss_pred CeeeeccCCccccCCcccCCcccceEEeccCCccccCCCCccccCCCCceecccc-ccccCCCCCccccccccccceecc
Q 001782 103 RFINFANNGFSGEIPGEIGRLFRLETLILANNSFSGKIPSNLSRCSNLINFHARG-NNLVGQIPPDIGYSWLKLEFLSLR 181 (1013)
Q Consensus 103 ~~L~l~~n~l~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~-n~l~~~ip~~~~~~l~~L~~L~L~ 181 (1013)
..++|..|+|+..-|.+|+.+++|+.||||+|+|+..-|..|.+|.+|..|.+-+ |+|+ ++|.+.|.+|..|+.|.+.
T Consensus 70 veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 70 VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred eEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHHHHHHHhcC
Confidence 4455666666644444666666666666666666655566666666666655555 5555 6666666666666666666
Q ss_pred cccccccCCCCccCCCCcceeeecccccCCCCCC-ccccccccceeeccccc------------ccCCCcchhccCCccc
Q 001782 182 DNLLAGQLAPSIGNISNLQVLSIGENRLSGRLPD-SLGQLRSLYYLSISENA------------FSGMFPSSIFNISSLE 248 (1013)
Q Consensus 182 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~n~------------l~~~~p~~~~~l~~L~ 248 (1013)
.|++.-+....|..|++|..|.+.+|.+. .++. +|..+.+++.+.+..|. +....|..++......
T Consensus 149 an~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 149 ANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred hhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 66666666666666777777777777666 3443 66666667776666665 2233445555555555
Q ss_pred eeeccCCccCCCCCCCcCCCCCCCcEE---EeeeccccccCC-CCCCCCCCCceEEcccCcccccccccccCCCCccccc
Q 001782 249 SISLLGNRLEGSLPVNIGFSLPNLENL---SVRQNNYTGSLP-HSLSNASNLRLLDFSLNHFSGQVKIDFNRLPNLFRLS 324 (1013)
Q Consensus 249 ~L~L~~N~l~~~~p~~~~~~l~~L~~L---~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 324 (1013)
...|.++++. .+++.-+ .-.++.+ ..+.+..-++-| ..|..+++|+.|+|++|+++.+.+..|.....++.|.
T Consensus 228 p~rl~~~Ri~-q~~a~kf--~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~ 304 (498)
T KOG4237|consen 228 PYRLYYKRIN-QEDARKF--LCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELY 304 (498)
T ss_pred hHHHHHHHhc-ccchhhh--hhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhh
Confidence 5556666555 3433322 1112211 111222222333 2356666666666666666666666666666666666
Q ss_pred cccCcCCCCCCCChhhhhhcccccccccccccccccCCccchhhhcchhhHHHHhccchhHHhhcccccceeeccccccc
Q 001782 325 FSKNNLGTGAIGDLDFIAHLTNCSKLEALGLDTNIFGGVLPLSIANLSSTIILFSMGLNQIYVKNLVNLNGFGLEYNQLT 404 (1013)
Q Consensus 325 L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 404 (1013)
|.+|+|..+ ...-|.++..|+.|+|.+|+|+
T Consensus 305 L~~N~l~~v-------------------------------------------------~~~~f~~ls~L~tL~L~~N~it 335 (498)
T KOG4237|consen 305 LTRNKLEFV-------------------------------------------------SSGMFQGLSGLKTLSLYDNQIT 335 (498)
T ss_pred cCcchHHHH-------------------------------------------------HHHhhhccccceeeeecCCeeE
Confidence 666655431 1223455555666666666666
Q ss_pred CCcccccCCCCCCCEEEccCCcc
Q 001782 405 GPIPHAIGELRNLQVLDLHHNNL 427 (1013)
Q Consensus 405 ~~~p~~~~~l~~L~~L~L~~N~l 427 (1013)
...|.+|..+..|.+|+|-.|.+
T Consensus 336 ~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 336 TVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred EEecccccccceeeeeehccCcc
Confidence 66666666666666666666544
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.3e-23 Score=268.65 Aligned_cols=343 Identities=23% Similarity=0.294 Sum_probs=184.8
Q ss_pred ccCCCCCCCeeeeccCC------ccccCCcccCCcc-cceEEeccCCccccCCCCccccCCCCceeccccccccCCCCCc
Q 001782 95 YVGNLSFLRFINFANNG------FSGEIPGEIGRLF-RLETLILANNSFSGKIPSNLSRCSNLINFHARGNNLVGQIPPD 167 (1013)
Q Consensus 95 ~l~~l~~L~~L~l~~n~------l~~~ip~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~ 167 (1013)
.+.++.+|++|.+..+. +...+|..|..++ +|+.|.+.+|.+. .+|..+ ...+|++|++++
T Consensus 553 aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~---------- 620 (1153)
T PLN03210 553 AFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQG---------- 620 (1153)
T ss_pred HHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcC----------
Confidence 35566666666665432 2233455554442 3555555555554 445444 234444444444
Q ss_pred cccccccccceecccccccccCCCCccCCCCcceeeecccccCCCCCCccccccccceeecccccccCCCcchhccCCcc
Q 001782 168 IGYSWLKLEFLSLRDNLLAGQLAPSIGNISNLQVLSIGENRLSGRLPDSLGQLRSLYYLSISENAFSGMFPSSIFNISSL 247 (1013)
Q Consensus 168 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 247 (1013)
|.+. .++..+..+++|+.|+|++|...+.+|+ ++.+++|+.|+|++|.....+|..+.++++|
T Consensus 621 ---------------s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L 683 (1153)
T PLN03210 621 ---------------SKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKL 683 (1153)
T ss_pred ---------------cccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCC
Confidence 4444 3444556677777777776654445664 6667777777777766555677777777777
Q ss_pred ceeeccCCccCCCCCCCcCCCCCCCcEEEeeeccccccCCCCCCCCCCCceEEcccCcccccccccccCCCCcccccccc
Q 001782 248 ESISLLGNRLEGSLPVNIGFSLPNLENLSVRQNNYTGSLPHSLSNASNLRLLDFSLNHFSGQVKIDFNRLPNLFRLSFSK 327 (1013)
Q Consensus 248 ~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 327 (1013)
+.|++++|...+.+|..+ .+++|+.|++++|...+.+|.. .++|+.|++++|.+... |..+ .+++|++|++.+
T Consensus 684 ~~L~L~~c~~L~~Lp~~i--~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~l-P~~~-~l~~L~~L~l~~ 756 (1153)
T PLN03210 684 EDLDMSRCENLEILPTGI--NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEF-PSNL-RLENLDELILCE 756 (1153)
T ss_pred CEEeCCCCCCcCccCCcC--CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccccc-cccc-cccccccccccc
Confidence 777777764444666654 4677777777776554445542 34667777777766532 2222 345555555543
Q ss_pred CcCCCCCCCChhhhhhcccccccccccccccccCCccchhhhcchhhHHHHhccchhHHhhcccccceeecccccccCCc
Q 001782 328 NNLGTGAIGDLDFIAHLTNCSKLEALGLDTNIFGGVLPLSIANLSSTIILFSMGLNQIYVKNLVNLNGFGLEYNQLTGPI 407 (1013)
Q Consensus 328 N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 407 (1013)
+..... . +.+....
T Consensus 757 ~~~~~l---------------------------~---------------------------------------~~~~~l~ 770 (1153)
T PLN03210 757 MKSEKL---------------------------W---------------------------------------ERVQPLT 770 (1153)
T ss_pred cchhhc---------------------------c---------------------------------------ccccccc
Confidence 321100 0 0000011
Q ss_pred ccccCCCCCCCEEEccCCccCccCCccccccCccCEEEcCCCcccCCCCcccccCcccceeecccccccccCCchhhccc
Q 001782 408 PHAIGELRNLQVLDLHHNNLDGHIPESLGNLTILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIV 487 (1013)
Q Consensus 408 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~ 487 (1013)
|..+...++|+.|+|++|...+.+|..++++++|+.|+|++|..-+.+|..+ ++++|+.|++++|.....+|.
T Consensus 771 ~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~------ 843 (1153)
T PLN03210 771 PLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPD------ 843 (1153)
T ss_pred hhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccc------
Confidence 1112223456666666665555666666666666666666654333555544 456666666666543222221
Q ss_pred chhhhhccCCCeecccCCccccCcCCCcEEEccCCCCCCCCccccccccccccccccc-cccccccCccccccCCCCeEe
Q 001782 488 TLSILLDLSGNLLTGSIPAEVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEG-NSLTGSIPLALKTLKSIKELD 566 (1013)
Q Consensus 488 ~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 566 (1013)
. .++|+.|+|++|.++ .+|.++..+++|+.|+|++ |+++ .+|..+..+++|+.|+
T Consensus 844 -------------------~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~ 899 (1153)
T PLN03210 844 -------------------I---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVD 899 (1153)
T ss_pred -------------------c---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeee
Confidence 1 134555555555554 4555555555555555555 3343 3455555556666666
Q ss_pred cccc
Q 001782 567 LSRN 570 (1013)
Q Consensus 567 Ls~N 570 (1013)
+++|
T Consensus 900 l~~C 903 (1153)
T PLN03210 900 FSDC 903 (1153)
T ss_pred cCCC
Confidence 6555
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=2.4e-23 Score=266.08 Aligned_cols=127 Identities=24% Similarity=0.283 Sum_probs=94.2
Q ss_pred cCccCEEEcCCCcccCCCCcccccCcccceeecccccccccCCchhhcccchhhhhccCCCeecccCCccccCcCCCcEE
Q 001782 438 LTILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSILLDLSGNLLTGSIPAEVGNLKNLVQL 517 (1013)
Q Consensus 438 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L 517 (1013)
.++|+.|+|++|...+.+|..++++++|+.|++++|..- +.+|..+ ++++|+.|
T Consensus 777 ~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L-------------------------~~LP~~~-~L~sL~~L 830 (1153)
T PLN03210 777 SPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINL-------------------------ETLPTGI-NLESLESL 830 (1153)
T ss_pred cccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCc-------------------------CeeCCCC-CccccCEE
Confidence 345666666666555556666666666666666554322 2344444 57889999
Q ss_pred EccCCCCCCCCccccccccccccccccccccccccCccccccCCCCeEeccc-cccccccccccccccccceeecCCcc
Q 001782 518 GLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSR-NNLSGQIPEFLENLSFLEYLNLSYNH 595 (1013)
Q Consensus 518 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~ 595 (1013)
+|++|.....+|.. .++|++|+|++|.++ .+|..+..+++|+.|+|++ |+|. .+|..+..+++|+.++++++.
T Consensus 831 ~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 831 DLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 99987655556653 368999999999999 7899999999999999999 5666 588888999999999999885
No 417
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=1.9e-23 Score=210.80 Aligned_cols=172 Identities=20% Similarity=0.239 Sum_probs=129.7
Q ss_pred CCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCCCC
Q 001782 786 GSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSP 865 (1013)
Q Consensus 786 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 865 (1013)
|+|.++++... ..+++.+++.|+.|++.||+|||++ + ||+||+++.++.+|+ ||.++.....
T Consensus 1 GsL~~~l~~~~-----~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~-- 62 (176)
T smart00750 1 VSLADILEVRG-----RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE-- 62 (176)
T ss_pred CcHHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc--
Confidence 68999998642 4699999999999999999999999 6 999999999999999 9998754321
Q ss_pred CccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHhhh
Q 001782 866 ATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEIVD 945 (1013)
Q Consensus 866 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~ 945 (1013)
...||+.|||||++.+..++.++|||||||++|||++|+.||...... ......++.
T Consensus 63 -----------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~------------~~~~~~~~~ 119 (176)
T smart00750 63 -----------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL------------SAILEILLN 119 (176)
T ss_pred -----------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh------------cHHHHHHHH
Confidence 125789999999999999999999999999999999999998653211 111222222
Q ss_pred hhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 001782 946 PLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARKI 1007 (1013)
Q Consensus 946 ~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 1007 (1013)
.+....+..|+. ..... ....+.+++.+||+.+|++||++.|+++.+..+...
T Consensus 120 ~~~~~~~~~~~~--------~~~~~-~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 120 GMPADDPRDRSN--------LESVS-AARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred HhccCCcccccc--------HHHHH-hhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 222222211110 01111 113588999999999999999999999998877544
No 418
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1.8e-23 Score=246.91 Aligned_cols=264 Identities=33% Similarity=0.383 Sum_probs=131.7
Q ss_pred CcceeeecccccCCCCCCccccccccceeecccccccCCCcchhccCCccceeeccCCccCCCCCCCcCCCCCCCcEEEe
Q 001782 198 NLQVLSIGENRLSGRLPDSLGQLRSLYYLSISENAFSGMFPSSIFNISSLESISLLGNRLEGSLPVNIGFSLPNLENLSV 277 (1013)
Q Consensus 198 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L 277 (1013)
.-..|+|++|.|+ .+|..+. ++|+.|++++|+++ .+|.. +++|++|+|++|+|+ .+|.. .++|+.|++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l----p~sL~~L~L 269 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL----PPGLLELSI 269 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc----ccccceeec
Confidence 4556677777776 5666554 35667777777666 34432 456666666666666 45531 245666666
Q ss_pred eeccccccCCCCCCCCCCCceEEcccCcccccccccccCCCCccccccccCcCCCCCCCChhhhhhcccccccccccccc
Q 001782 278 RQNNYTGSLPHSLSNASNLRLLDFSLNHFSGQVKIDFNRLPNLFRLSFSKNNLGTGAIGDLDFIAHLTNCSKLEALGLDT 357 (1013)
Q Consensus 278 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~ 357 (1013)
++|.++ .+|..+ ++|+.|++++|+++.... .+++|+.|++++|
T Consensus 270 s~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N----------------------------- 312 (788)
T PRK15387 270 FSNPLT-HLPALP---SGLCKLWIFGNQLTSLPV----LPPGLQELSVSDN----------------------------- 312 (788)
T ss_pred cCCchh-hhhhch---hhcCEEECcCCccccccc----cccccceeECCCC-----------------------------
Confidence 666655 333322 345555555555543211 1223333333333
Q ss_pred cccCCccchhhhcchhhHHHHhccchhHHhhcccccceeecccccccCCcccccCCCCCCCEEEccCCccCccCCccccc
Q 001782 358 NIFGGVLPLSIANLSSTIILFSMGLNQIYVKNLVNLNGFGLEYNQLTGPIPHAIGELRNLQVLDLHHNNLDGHIPESLGN 437 (1013)
Q Consensus 358 n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 437 (1013)
+|++ +|.. ..+|+.|++++|+|++ +|..
T Consensus 313 --------------------------------------------~L~~-Lp~l---p~~L~~L~Ls~N~L~~-LP~l--- 340 (788)
T PRK15387 313 --------------------------------------------QLAS-LPAL---PSELCKLWAYNNQLTS-LPTL--- 340 (788)
T ss_pred --------------------------------------------cccc-CCCC---cccccccccccCcccc-cccc---
Confidence 3332 1111 1234444555555542 3321
Q ss_pred cCccCEEEcCCCcccCCCCcccccCcccceeecccccccccCCchhhcccchhhhhccCCCeecccCCccccCcCCCcEE
Q 001782 438 LTILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSILLDLSGNLLTGSIPAEVGNLKNLVQL 517 (1013)
Q Consensus 438 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L 517 (1013)
..+|+.|+|++|+|+ .+|... .+|+.|++++|+|+ .+|.. ...|+.|++++|+|++ +|.. .++|+.|
T Consensus 341 p~~Lq~LdLS~N~Ls-~LP~lp---~~L~~L~Ls~N~L~-~LP~l----~~~L~~LdLs~N~Lt~-LP~l---~s~L~~L 407 (788)
T PRK15387 341 PSGLQELSVSDNQLA-SLPTLP---SELYKLWAYNNRLT-SLPAL----PSGLKELIVSGNRLTS-LPVL---PSELKEL 407 (788)
T ss_pred ccccceEecCCCccC-CCCCCC---cccceehhhccccc-cCccc----ccccceEEecCCcccC-CCCc---ccCCCEE
Confidence 134555555555555 234321 24455555555555 34421 1234445555555552 3322 1345666
Q ss_pred EccCCCCCCCCccccccccccccccccccccccccCccccccCCCCeEecccccccccccccc
Q 001782 518 GLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRNNLSGQIPEFL 580 (1013)
Q Consensus 518 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 580 (1013)
++++|+|+ .+|..+ .+|+.|+|++|+|+ .+|..+.++++|+.|+|++|+|++.+|..+
T Consensus 408 dLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 408 MVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred EccCCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 66666665 344322 34555666666665 455556666666666666666665555444
No 419
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=3.5e-23 Score=244.44 Aligned_cols=115 Identities=30% Similarity=0.438 Sum_probs=59.2
Q ss_pred ccceEEeccCCccccCCCCccccCCCCceeccccccccCCCCCccccccccccceecccccccccCCCCccCCCCcceee
Q 001782 124 FRLETLILANNSFSGKIPSNLSRCSNLINFHARGNNLVGQIPPDIGYSWLKLEFLSLRDNLLAGQLAPSIGNISNLQVLS 203 (1013)
Q Consensus 124 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 203 (1013)
..-..|+|++|.|+ .+|..+. ++|+.|++++|+++ .+|.. +++|++|+
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l----------------------------p~~Lk~Ld 248 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL----------------------------PPELRTLE 248 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC----------------------------CCCCcEEE
Confidence 34556777777777 6776665 36667777776666 34431 13444445
Q ss_pred ecccccCCCCCCccccccccceeecccccccCCCcchhccCCccceeeccCCccCCCCCCCcCCCCCCCcEEEeeecccc
Q 001782 204 IGENRLSGRLPDSLGQLRSLYYLSISENAFSGMFPSSIFNISSLESISLLGNRLEGSLPVNIGFSLPNLENLSVRQNNYT 283 (1013)
Q Consensus 204 L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~ 283 (1013)
|++|+|+ .+|.. .++|+.|+|++|.++ .+|.. .++|+.|+|++|+++ .+|. .+++|++|+|++|+++
T Consensus 249 Ls~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt-~LP~----~p~~L~~LdLS~N~L~ 315 (788)
T PRK15387 249 VSGNQLT-SLPVL---PPGLLELSIFSNPLT-HLPAL---PSGLCKLWIFGNQLT-SLPV----LPPGLQELSVSDNQLA 315 (788)
T ss_pred ecCCccC-cccCc---ccccceeeccCCchh-hhhhc---hhhcCEEECcCCccc-cccc----cccccceeECCCCccc
Confidence 5555444 23332 234455555555554 23332 134445555555555 4443 1244555555555555
No 420
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=4.6e-24 Score=265.04 Aligned_cols=207 Identities=18% Similarity=0.227 Sum_probs=138.8
Q ss_pred cCCC-CccceEEEEeecCC--ccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 001782 752 NIRH-RNLIKIITVCSSID--FEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCH 828 (1013)
Q Consensus 752 ~l~h-~niv~~~~~~~~~~--~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~ 828 (1013)
.++| +||.++++++.... ..+.+..+.++||++ ++|.++++... ..+++.+++.++.||++||+|||++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~-- 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPD-----RSVDAFECFHVFRQIVEIVNAAHSQ-- 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhccc-----ccccHHHHHHHHHHHHHHHHHHHhC--
Confidence 3455 57888888753221 123345778899886 79999997532 4689999999999999999999999
Q ss_pred CCeeecCCCCCceEecCCC-------------------ceEEccccccccCCCCCCCcc--c------cCCCCCcccccc
Q 001782 829 PPIVHGDLKPSNVLLDHDM-------------------VAHVGDFGLARFLPPCSPATI--L------ETPSSSTGIKGT 881 (1013)
Q Consensus 829 ~~ivH~Dlkp~NIll~~~~-------------------~~kl~DFG~a~~~~~~~~~~~--~------~~~~~~~~~~gt 881 (1013)
||+||||||+|||++..+ .+|++|||+++.......... . ..........||
T Consensus 100 -gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 178 (793)
T PLN00181 100 -GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEM 178 (793)
T ss_pred -CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCC
Confidence 999999999999996544 455556665543211000000 0 000011224689
Q ss_pred cccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCC
Q 001782 882 VGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGS 961 (1013)
Q Consensus 882 ~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~ 961 (1013)
+.|||||++.+..++.++|||||||++|||++|..|+.... ........... .+.
T Consensus 179 ~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~~~--------------~~~-------- 233 (793)
T PLN00181 179 SWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHRVL--------------PPQ-------- 233 (793)
T ss_pred cceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHhhc--------------Chh--------
Confidence 99999999999999999999999999999999888764310 00000000000 000
Q ss_pred CchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 962 HRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 962 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
..........++.+||+.+|.+||++.||++
T Consensus 234 -------~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 234 -------ILLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred -------hhhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 0001123456778899999999999999975
No 421
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=2.9e-23 Score=227.50 Aligned_cols=175 Identities=21% Similarity=0.161 Sum_probs=133.7
Q ss_pred hhhhccCCCCCceeeccceEEEEEEECC-CCeEEEEEEEeecc-----ccchhHHHHHHHHHhcCCCCccceEEEEeecC
Q 001782 695 SKATNDFSSSNMIGQGSFGFVYRGNLGE-NEMAVAVKVMNLKQ-----RGATKSFVAECEALRNIRHRNLIKIITVCSSI 768 (1013)
Q Consensus 695 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 768 (1013)
....++|.+.+.||+|+||+||+|.+.. +++.||||+..... ....+.+.+|++++++++|+++++.+..+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 3445789999999999999999999875 67778999875321 12245689999999999999998533321
Q ss_pred CccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCC-CCCceEecCCC
Q 001782 769 DFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDL-KPSNVLLDHDM 847 (1013)
Q Consensus 769 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~ 847 (1013)
+..++||||++|++|... ... . ...++.|+++||+|+|++ ||+|||| ||+||+++.++
T Consensus 91 -----~~~~LVmE~~~G~~L~~~-~~~---------~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~ 149 (365)
T PRK09188 91 -----GKDGLVRGWTEGVPLHLA-RPH---------G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDG 149 (365)
T ss_pred -----CCcEEEEEccCCCCHHHh-Ccc---------c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCC
Confidence 347999999999999632 110 1 146788999999999999 9999999 99999999999
Q ss_pred ceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCC
Q 001782 848 VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG 893 (1013)
Q Consensus 848 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 893 (1013)
.+||+|||+|+.+...................+++.|+|||++...
T Consensus 150 ~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 150 EAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9999999999977654322221112223467788999999987654
No 422
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=3.4e-22 Score=202.16 Aligned_cols=208 Identities=21% Similarity=0.344 Sum_probs=178.4
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCC-CCccceEEEEeecCCccccceEE
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIR-HRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
-.|+++++||+|.||.++.|+..-++++||||.-...+ +..++..|.+..+.+. .++|..++-+ ..++.+-.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYF-----GqeG~~Ni 100 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYF-----GQEGKYNI 100 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeee-----ccccchhh
Confidence 37999999999999999999999899999999764333 3467889999999984 7899988877 56778889
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC-----ceEEc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM-----VAHVG 852 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kl~ 852 (1013)
+|+|.+. .+|+|+.+-.. ..++..++..||.|+..-++|+|++ .+|+|||||+|+||...+ .+.++
T Consensus 101 LVidLLG-PSLEDLFD~Cg-----R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~Ihii 171 (449)
T KOG1165|consen 101 LVIDLLG-PSLEDLFDLCG-----RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHII 171 (449)
T ss_pred hhhhhhC-cCHHHHHHHhc-----CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEE
Confidence 9999886 89999998774 4799999999999999999999999 999999999999997543 68899
Q ss_pred cccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCC
Q 001782 853 DFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFN 923 (1013)
Q Consensus 853 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~ 923 (1013)
|||+|+.+.+......... .......||.+||+-....+.+-+.+.|+-|+|-++++.+-|..||+....
T Consensus 172 DFGmAK~YrDp~TkqHIPY-rE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 172 DFGMAKEYRDPKTKQHIPY-REHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred eccchhhhcCccccccCcc-ccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 9999998866554433222 234567899999999999999999999999999999999999999998643
No 423
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=6.4e-22 Score=218.95 Aligned_cols=269 Identities=22% Similarity=0.257 Sum_probs=198.1
Q ss_pred cCCCCCceeeccceEEEEEEECCCC-eEEEEEEEeeccccchhHHHHHHHHHhcCCC----CccceEEEEeecCCccccc
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENE-MAVAVKVMNLKQRGATKSFVAECEALRNIRH----RNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~ 774 (1013)
+|.+.++||+|+||.||.|.+..++ ..+|+|+...........+..|..++..+.. +++..+++... ..+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 8999999999999999999997664 6789998875544333378889999998862 68888888731 3567
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC-----Cce
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD-----MVA 849 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-----~~~ 849 (1013)
+.++||+.+. .+|.++..... .+.++..++.+|+.|++.+|+++|+. |++||||||+|+++... ..+
T Consensus 95 ~~~iVM~l~G-~sL~dl~~~~~----~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~ 166 (322)
T KOG1164|consen 95 FNFIVMSLLG-PSLEDLRKRNP----PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTL 166 (322)
T ss_pred eeEEEEeccC-ccHHHHHHhCC----CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceE
Confidence 8899999876 89999886654 26899999999999999999999999 99999999999999865 468
Q ss_pred EEccccccccCC--CCCCCccccCCCC-CcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCc
Q 001782 850 HVGDFGLARFLP--PCSPATILETPSS-STGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGL 926 (1013)
Q Consensus 850 kl~DFG~a~~~~--~~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~ 926 (1013)
.+.|||+|+.+. ...... ...... .....||..|+++.+..+...+++.|+||++.++.|+..|..||........
T Consensus 167 ~llDfGlar~~~~~~~~~~~-~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~ 245 (322)
T KOG1164|consen 167 YLLDFGLARRFKYVGDSGGN-LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL 245 (322)
T ss_pred EEEecCCCccccccCCCCcc-cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch
Confidence 999999998332 222111 011111 3457799999999999999999999999999999999999999976432211
Q ss_pred cHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhhh
Q 001782 927 TLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSARK 1006 (1013)
Q Consensus 927 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1006 (1013)
...+. .......... .....+..+.++...+-..+..++|....+...++....
T Consensus 246 -~~~~~---------~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 246 -KSKFE---------KDPRKLLTDR----------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD 299 (322)
T ss_pred -HHHHH---------HHhhhhcccc----------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence 11110 0000000000 000112334455555555889999999999998877754
Q ss_pred h
Q 001782 1007 I 1007 (1013)
Q Consensus 1007 ~ 1007 (1013)
.
T Consensus 300 ~ 300 (322)
T KOG1164|consen 300 S 300 (322)
T ss_pred h
Confidence 4
No 424
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.88 E-value=1.6e-22 Score=240.79 Aligned_cols=99 Identities=29% Similarity=0.425 Sum_probs=59.9
Q ss_pred CCCEEEccCCccCccCCccccccCccCEEEcCCCcccCCCCcccccCcccceeecccccccccCCchhhcccchhhhhcc
Q 001782 416 NLQVLDLHHNNLDGHIPESLGNLTILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSILLDL 495 (1013)
Q Consensus 416 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~L 495 (1013)
+|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|+.+. ..|+.|++
T Consensus 326 sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~---~sL~~LdL 395 (754)
T PRK15370 326 GLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP---AALQIMQA 395 (754)
T ss_pred cceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH---HHHHHHhh
Confidence 45566666666653 444332 46677777777766 4555443 46777777777777 5565542 35666777
Q ss_pred CCCeecccCCccc----cCcCCCcEEEccCCCCC
Q 001782 496 SGNLLTGSIPAEV----GNLKNLVQLGLSENRFS 525 (1013)
Q Consensus 496 s~N~l~~~~~~~~----~~l~~L~~L~Ls~N~l~ 525 (1013)
++|+|+ .+|..+ ..++++..|+|.+|.++
T Consensus 396 s~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 396 SRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred ccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 777776 344433 33466677777777765
No 425
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=6.3e-22 Score=191.40 Aligned_cols=208 Identities=24% Similarity=0.326 Sum_probs=173.8
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCC-CccceEEEEeecCCccccceE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRH-RNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.+.|.++++||.|+||.+|.|....+|..||||+-..... ...+..|.++.+.+++ ..|..+..+ ..+..+.
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y-----~~e~~yn 86 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHY-----GTEKDYN 86 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhh-----ccccccc
Confidence 4689999999999999999999999999999998754433 4678889999999964 566666665 4456788
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC---CceEEcc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD---MVAHVGD 853 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~D 853 (1013)
.+||+... .+|.++..-.. ..++..+++-++-|++.-++|+|.+ +++||||||+|+|..-+ ..+.++|
T Consensus 87 vlVMdLLG-PsLEdLfnfC~-----R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LID 157 (341)
T KOG1163|consen 87 VLVMDLLG-PSLEDLFNFCS-----RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLID 157 (341)
T ss_pred eeeeeccC-ccHHHHHHHHh-----hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEe
Confidence 99999886 89999988764 4799999999999999999999999 99999999999999754 3688999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcC
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMF 922 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~ 922 (1013)
||+|+.+-+........ ........||.+|.+-....+...+.+.|+-|+|.++.+.--|..||+...
T Consensus 158 FGLaKky~d~~t~~HIp-yre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 158 FGLAKKYRDIRTRQHIP-YREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred ccchhhhccccccccCc-cccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 99999876544333221 223456789999999988888888999999999999999999999999853
No 426
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.87 E-value=2.8e-23 Score=203.65 Aligned_cols=249 Identities=22% Similarity=0.333 Sum_probs=186.7
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEE
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ--RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
.....+|.+...|+.|+|++++++ +++|++.... ....++|..|.-.++.+.||||.+++|.|..+ ....+
T Consensus 192 lnl~tkl~e~hsgelwrgrwqgnd--ivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-----pnlv~ 264 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQGND--IVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-----PNLVI 264 (448)
T ss_pred hhhhhhhccCCCcccccccccCcc--hhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC-----CCceE
Confidence 344568999999999999998665 6777776332 22346799999999999999999999998654 77899
Q ss_pred EEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc--cccc
Q 001782 779 VYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG--DFGL 856 (1013)
Q Consensus 779 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~--DFG~ 856 (1013)
+..||+.|+|+..++.... -..+..++.+++.++|+|++|||+.. +-|-.--+.+..|++|++.+++|+ |-.+
T Consensus 265 isq~mp~gslynvlhe~t~----vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kf 339 (448)
T KOG0195|consen 265 ISQYMPFGSLYNVLHEQTS----VVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKF 339 (448)
T ss_pred eeeeccchHHHHHHhcCcc----EEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheeccccee
Confidence 9999999999999998744 35677899999999999999999973 234444688999999999988773 4333
Q ss_pred cccCCCCCCCccccCCCCCcccccccccccccccCCCCCC---cccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH
Q 001782 857 ARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMS---ATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK 933 (1013)
Q Consensus 857 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~ 933 (1013)
+.. ..+..-.+.||+||.++..+-+ .++|+|||++++||+.|+..||.+...-+-.......
T Consensus 340 sfq---------------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkiale 404 (448)
T KOG0195|consen 340 SFQ---------------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALE 404 (448)
T ss_pred eee---------------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhc
Confidence 221 1223346899999998877543 4699999999999999999999876443322211110
Q ss_pred hhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHHHHhh
Q 001782 934 MALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKLCSAR 1005 (1013)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1005 (1013)
. -|+... ......+.+++.-|+..||.+||.+..|+-.|+.+.
T Consensus 405 g-------------------lrv~ip----------pgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 405 G-------------------LRVHIP----------PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred c-------------------ccccCC----------CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 0 011100 122345678888999999999999999998888754
No 427
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=1.5e-21 Score=232.51 Aligned_cols=204 Identities=30% Similarity=0.466 Sum_probs=164.6
Q ss_pred CCCCeeeeccCCccccCCcccCCcccceEEeccCCccccCCCCccccCCCCceeccccccccCCCCCcccccccccccee
Q 001782 100 SFLRFINFANNGFSGEIPGEIGRLFRLETLILANNSFSGKIPSNLSRCSNLINFHARGNNLVGQIPPDIGYSWLKLEFLS 179 (1013)
Q Consensus 100 ~~L~~L~l~~n~l~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~ 179 (1013)
.+...|++++++++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|++|++++|+++ .+|..++ ..|+.|+
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~---~~L~~L~ 247 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP---DTIQEME 247 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh---ccccEEE
Confidence 45788999999999 7887764 58999999999999 6887765 58999999999998 7887654 4789999
Q ss_pred cccccccccCCCCccCCCCcceeeecccccCCCCCCccccccccceeecccccccCCCcchhccCCccceeeccCCccCC
Q 001782 180 LRDNLLAGQLAPSIGNISNLQVLSIGENRLSGRLPDSLGQLRSLYYLSISENAFSGMFPSSIFNISSLESISLLGNRLEG 259 (1013)
Q Consensus 180 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 259 (1013)
|++|.++ .+|..+. ++|+.|++++|+|+ .+|+.+. ++|+.|+|++|++++ +|..+. ++|+.|++++|+++
T Consensus 248 Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt- 317 (754)
T PRK15370 248 LSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLT- 317 (754)
T ss_pred CcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccc-
Confidence 9999998 5666654 58999999999998 6888765 589999999999994 665543 57999999999999
Q ss_pred CCCCCcCCCCCCCcEEEeeeccccccCCCCCCCCCCCceEEcccCcccccccccccCCCCccccccccCcCCC
Q 001782 260 SLPVNIGFSLPNLENLSVRQNNYTGSLPHSLSNASNLRLLDFSLNHFSGQVKIDFNRLPNLFRLSFSKNNLGT 332 (1013)
Q Consensus 260 ~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 332 (1013)
.+|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+|+. +|..+ .++|+.|++++|+++.
T Consensus 318 ~LP~~l~---~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~-LP~~l--p~~L~~LdLs~N~Lt~ 381 (754)
T PRK15370 318 ALPETLP---PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITV-LPETL--PPTITTLDVSRNALTN 381 (754)
T ss_pred cCCcccc---ccceeccccCCcccc-CChhhc--CcccEEECCCCCCCc-CChhh--cCCcCEEECCCCcCCC
Confidence 6887653 689999999999985 676664 689999999999985 34333 2567777777776653
No 428
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=1e-21 Score=230.01 Aligned_cols=257 Identities=19% Similarity=0.247 Sum_probs=187.4
Q ss_pred CCCCceeeccceEEEEEEECCCCeEEEEEEEeec--ccc----chhHHHHHHHHHhcCCCCccceEEEEeecCCccccce
Q 001782 702 SSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK--QRG----ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 702 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
...+++|.|++|.|+.+.........+.|.+... ... ....+..|+.+-..++|||++..+..+... ..
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~-----~~ 395 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI-----DG 395 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc-----cc
Confidence 3567899999998888877655555555544311 111 112256677777888999997776664322 22
Q ss_pred EEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccc
Q 001782 776 KAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 776 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 855 (1013)
..-+||||++ +|..++... +.+...++..++.|+..|++|+|+. ||.|||+|++|+++..+|.+||+|||
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~~------~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg 465 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMSN------GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFG 465 (601)
T ss_pred chhhhhcccH-HHHHHHhcc------cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecC
Confidence 2333999998 999999875 4688889999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcc-cchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHh
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSAT-GDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKM 934 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~ 934 (1013)
.+..+.-.... ........+|+..|+|||++.+..|.+. .||||.|++++.|.+|+.||......+..+.. .
T Consensus 466 ~~~vf~~~~e~----~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~---~ 538 (601)
T KOG0590|consen 466 AASVFRYPWEK----NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT---N 538 (601)
T ss_pred cceeeccCcch----hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh---h
Confidence 98765432221 1133567889999999999999999885 89999999999999999999875444333200 0
Q ss_pred hCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHH
Q 001782 935 ALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVA 999 (1013)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 999 (1013)
...... .............+.....++.+|++.||.+|.|+++|++
T Consensus 539 ~~~~~~-------------------~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 539 NYSDQR-------------------NIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cccccc-------------------ccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 000000 0001111222445566788999999999999999999976
No 429
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.82 E-value=4.6e-19 Score=199.27 Aligned_cols=264 Identities=29% Similarity=0.422 Sum_probs=194.2
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc---chhHHHHHHHHHhcCCCC-ccceEEEEeecCCccccceE
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG---ATKSFVAECEALRNIRHR-NLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~~ 776 (1013)
|.+.+.||.|+||.||++.+. ..+++|.+...... ....+.+|+.+++.+.|+ +++++.+++. .....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQ-----DEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEe-----cCCEE
Confidence 677889999999999999997 67899998754333 356789999999999988 7999999862 33447
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC-ceEEcccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM-VAHVGDFG 855 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG 855 (1013)
+++++++.++++.+++...... ..+.......+..|++.++.|+|+. +++|||+||+||+++..+ .++++|||
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccC
Confidence 9999999999999777765221 2688899999999999999999999 999999999999999988 79999999
Q ss_pred ccccCCCCCCCccccCCCCCcccccccccccccccCC---CCCCcccchHHHHHHHHHHHhCCCCCCCcCCC--CccHHH
Q 001782 856 LARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG---GDMSATGDVYSFGILLLEMFTRRRPTDNMFND--GLTLHE 930 (1013)
Q Consensus 856 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~--~~~~~~ 930 (1013)
.++.+.......... .......|+..|+|||.+.+ ..+....|+||+|++++++++|..||...... ......
T Consensus 148 ~~~~~~~~~~~~~~~--~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~ 225 (384)
T COG0515 148 LAKLLPDPGSTSSIP--ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLK 225 (384)
T ss_pred cceecCCCCcccccc--ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHH
Confidence 998554322111000 12456789999999999988 57888999999999999999999997653221 001111
Q ss_pred HHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 931 FAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 931 ~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
........ ...... ..... ......+.+++..|+..+|..|.++.+....
T Consensus 226 ~~~~~~~~--------~~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 226 IILELPTP--------SLASPL----------SPSNP--ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHhcCCc--------cccccc----------Ccccc--chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11000000 000000 00000 1223456778888999999999998887764
No 430
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=5.8e-20 Score=190.02 Aligned_cols=206 Identities=22% Similarity=0.244 Sum_probs=141.0
Q ss_pred CCCccceEEEEeecCC----------------------ccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHH
Q 001782 754 RHRNLIKIITVCSSID----------------------FEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLN 811 (1013)
Q Consensus 754 ~h~niv~~~~~~~~~~----------------------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~ 811 (1013)
+|||||++.+++.+.- ..++...|+||..++ .+|.+|+..+ ..+.....-
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~-------~~s~r~~~~ 345 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR-------HRSYRTGRV 345 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC-------CCchHHHHH
Confidence 5999999998864311 133456789999988 8999999876 456667888
Q ss_pred HHHHHHHHHHHHhhcCCCCeeecCCCCCceEec--CCC--ceEEccccccccCCCCCCCccccCCCCCcccccccccccc
Q 001782 812 LVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLD--HDM--VAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAP 887 (1013)
Q Consensus 812 i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~--~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 887 (1013)
+..|+++|+.|||.+ ||.|||+|++|||+. +|+ ...|+|||++-- ++....+ ...........|...-|||
T Consensus 346 ~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLA-d~~hGlq-lpy~S~~Vd~GGNa~lmAP 420 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLA-DDNHGLQ-LPYESDEVDLGGNAKLMAP 420 (598)
T ss_pred HHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeee-ccccccc-cccccccccCCCcceecch
Confidence 999999999999999 999999999999994 444 567899998742 1111111 1223334556688889999
Q ss_pred cccCCCC------CCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCC
Q 001782 888 EYGMGGD------MSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGS 961 (1013)
Q Consensus 888 E~~~~~~------~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~ 961 (1013)
|+....+ -..|+|.|+.|.+.||++....||..........+.+.....|
T Consensus 421 Ei~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLP------------------------ 476 (598)
T KOG4158|consen 421 EIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLP------------------------ 476 (598)
T ss_pred hhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCC------------------------
Confidence 9876532 2348999999999999999999997621111111111111111
Q ss_pred CchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHHH
Q 001782 962 HRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAKL 1001 (1013)
Q Consensus 962 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1001 (1013)
.-++.++..+.+++...++.||++|++..-....|
T Consensus 477 -----alp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 477 -----ALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred -----CCcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 01123455566777777777888887765544443
No 431
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=3.2e-20 Score=188.57 Aligned_cols=176 Identities=14% Similarity=0.141 Sum_probs=133.2
Q ss_pred hhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhH---------HHHHHHHHhcCCCCccceEEEEeec
Q 001782 697 ATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKS---------FVAECEALRNIRHRNLIKIITVCSS 767 (1013)
Q Consensus 697 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~~~~~~~~ 767 (1013)
..++|++.+++|.|+||.||.+.. ++..+|+|+++.......+. +.+|+..+.++.||+|..+.+++..
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 367999999999999999999766 35579999997543332222 6789999999999999999988543
Q ss_pred CCc---cccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEec
Q 001782 768 IDF---EEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLD 844 (1013)
Q Consensus 768 ~~~---~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~ 844 (1013)
... ......++||||++|.+|.++.. ++. ....+++.++..+|+. |++|||+||+||+++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~ 169 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVS 169 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEe
Confidence 211 12346899999999999988732 222 2456999999999999 999999999999999
Q ss_pred CCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHH
Q 001782 845 HDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMF 912 (1013)
Q Consensus 845 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell 912 (1013)
.++ ++++|||.......+... ..+.....+..++|||+||+++....
T Consensus 170 ~~g-i~liDfg~~~~~~e~~a~--------------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 170 KNG-LRIIDLSGKRCTAQRKAK--------------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCC-EEEEECCCcccccchhhH--------------------HHHHHHhHhcccccccceeEeehHHH
Confidence 988 999999987643211100 11334445667999999999876544
No 432
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=1.2e-19 Score=183.43 Aligned_cols=139 Identities=16% Similarity=0.116 Sum_probs=107.8
Q ss_pred CCceeeccceEEEEEEECCCCeEEEEEEEeecccc--c-------hhH-----------------HHHHHHHHhcCCCCc
Q 001782 704 SNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG--A-------TKS-----------------FVAECEALRNIRHRN 757 (1013)
Q Consensus 704 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~h~n 757 (1013)
.+.||+|+||.||+|.+. +|++||||+++..... . ..+ ...|++.++++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 478999999999999997 8999999999754221 0 111 234999999998777
Q ss_pred cceEEEEeecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHH-hhcCCCCeeecCC
Q 001782 758 LIKIITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYL-HHHCHPPIVHGDL 836 (1013)
Q Consensus 758 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~L-H~~~~~~ivH~Dl 836 (1013)
+.....+.. ...++||||++++++....... ..++..++..++.|++.+++++ |+. ||+||||
T Consensus 81 v~~p~~~~~-------~~~~iVmE~i~g~~l~~~~~~~------~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDl 144 (190)
T cd05147 81 IPCPEPILL-------KSHVLVMEFIGDDGWAAPRLKD------APLSESKARELYLQVIQIMRILYQDC---RLVHADL 144 (190)
T ss_pred CCCCcEEEe-------cCCEEEEEEeCCCCCcchhhhc------CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 643332211 2237999999987766543222 4688899999999999999999 688 9999999
Q ss_pred CCCceEecCCCceEEccccccccC
Q 001782 837 KPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 837 kp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
||+||+++ ++.++|+|||+|...
T Consensus 145 kP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 145 SEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred CHHHEEEE-CCcEEEEEccccccC
Confidence 99999998 578999999999743
No 433
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.80 E-value=8.9e-20 Score=190.90 Aligned_cols=243 Identities=21% Similarity=0.264 Sum_probs=151.2
Q ss_pred ccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc---chhHHHHHHHHHhcCC----------CCccceEEEEe
Q 001782 699 NDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG---ATKSFVAECEALRNIR----------HRNLIKIITVC 765 (1013)
Q Consensus 699 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~----------h~niv~~~~~~ 765 (1013)
..+...+.||.|+++.||.+++.++++++|+|++...... ..+++++|.-....+. |-.++-.++..
T Consensus 12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~ 91 (288)
T PF14531_consen 12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL 91 (288)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence 3455678999999999999999999999999999755432 3355666665444432 22222223322
Q ss_pred ecC---Cc----cccc-----eEEEEEeeccCCCHHHHhhccccccc-cCCCCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 001782 766 SSI---DF----EEVD-----FKAIVYEYMECGSLEDWLHQSNDQLE-VGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIV 832 (1013)
Q Consensus 766 ~~~---~~----~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~-~~~l~~~~~~~i~~qia~~L~~LH~~~~~~iv 832 (1013)
... .+ .+.. ..+++|+-+. ++|.+++..-..... ........+..+..|+++.+++||+. |+|
T Consensus 92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlV 167 (288)
T PF14531_consen 92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLV 167 (288)
T ss_dssp EETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred EEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceE
Confidence 210 00 0111 3467888886 899888764211100 12344555677779999999999999 999
Q ss_pred ecCCCCCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCC--------CCCCcccchHHH
Q 001782 833 HGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMG--------GDMSATGDVYSF 904 (1013)
Q Consensus 833 H~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DIwSl 904 (1013)
|+||+|+|++++.+|.++|+||+.....+.. ......+..|.|||.... -.++.+.|.|++
T Consensus 168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~-----------~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~L 236 (288)
T PF14531_consen 168 HGDIKPENFLLDQDGGVFLGDFSSLVRAGTR-----------YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQL 236 (288)
T ss_dssp EST-SGGGEEE-TTS-EEE--GGGEEETTEE-----------EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHH
T ss_pred ecccceeeEEEcCCCCEEEcChHHHeecCce-----------eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHH
Confidence 9999999999999999999999987644321 111234578999997543 247889999999
Q ss_pred HHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcc
Q 001782 905 GILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCS 984 (1013)
Q Consensus 905 G~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 984 (1013)
|+++|.|++|..||+.......... .+ ..| .+.++.+.+++..++
T Consensus 237 G~~ly~lWC~~lPf~~~~~~~~~~~-------------~f------------~~C----------~~~Pe~v~~LI~~lL 281 (288)
T PF14531_consen 237 GITLYSLWCGRLPFGLSSPEADPEW-------------DF------------SRC----------RDMPEPVQFLIRGLL 281 (288)
T ss_dssp HHHHHHHHHSS-STCCCGGGSTSGG-------------GG------------TTS----------S---HHHHHHHHHHT
T ss_pred HHHHHHHHHccCCCCCCCccccccc-------------cc------------hhc----------CCcCHHHHHHHHHHc
Confidence 9999999999999986422211100 00 011 133566788899999
Q ss_pred cCCCCCC
Q 001782 985 MESPSER 991 (1013)
Q Consensus 985 ~~dP~~R 991 (1013)
+++|.+|
T Consensus 282 ~~~~~~R 288 (288)
T PF14531_consen 282 QRNPEDR 288 (288)
T ss_dssp -SSGGGS
T ss_pred cCCcccC
Confidence 9999887
No 434
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.79 E-value=4.2e-20 Score=213.41 Aligned_cols=250 Identities=21% Similarity=0.280 Sum_probs=177.6
Q ss_pred cCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHH--HhcCCCCccceEEEEeecCCccccceE
Q 001782 700 DFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEA--LRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
+|...+.+|++.|=.|.+|++++ |. |+||++-...+ -..+.+.++++- ...++|||++++..+ ...+...
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~-----~~t~kAA 96 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKV-----LVTDKAA 96 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHH-----HHhhHHH
Confidence 67788999999999999999974 43 89999864442 222334333332 455689999998776 4455677
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
|+|-+|.. .+|.|.+..+ .-+...+.+.|+.|++.|+...|.. ||+|||||.+||||+.-.-+.|+||..
T Consensus 97 ylvRqyvk-hnLyDRlSTR------PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAs 166 (1431)
T KOG1240|consen 97 YLVRQYVK-HNLYDRLSTR------PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFAS 166 (1431)
T ss_pred HHHHHHHh-hhhhhhhccc------hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccc
Confidence 88888888 7999999875 4677888999999999999999999 999999999999999998999999976
Q ss_pred cc--cCCCCCCCccccCCCCCcccccccccccccccCCC----------C-CCcccchHHHHHHHHHHHh-CCCCCCCcC
Q 001782 857 AR--FLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGG----------D-MSATGDVYSFGILLLEMFT-RRRPTDNMF 922 (1013)
Q Consensus 857 a~--~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~~DIwSlG~il~ell~-G~~pf~~~~ 922 (1013)
-+ +++++.+.++.- .......-..|.|||.+-.. . .+++.||||+||++.|+++ |++||.-
T Consensus 167 FKPtYLPeDNPadf~f---FFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-- 241 (1431)
T KOG1240|consen 167 FKPTYLPEDNPADFTF---FFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-- 241 (1431)
T ss_pred cCCccCCCCCcccceE---EEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH--
Confidence 54 223333222111 11112233579999976441 2 5778999999999999998 7888853
Q ss_pred CCCccHHHHHHhhC--ChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHHHH
Q 001782 923 NDGLTLHEFAKMAL--PEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVVAK 1000 (1013)
Q Consensus 923 ~~~~~~~~~~~~~~--~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1000 (1013)
.+...... .......+ +++++ ..+..++..|++.||++|-+|++.++.
T Consensus 242 ------SQL~aYr~~~~~~~e~~L----------------------e~Ied--~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 242 ------SQLLAYRSGNADDPEQLL----------------------EKIED--VSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred ------HHHHhHhccCccCHHHHH----------------------HhCcC--ccHHHHHHHHHccCchhccCHHHHHHh
Confidence 11111110 11111111 11111 246788999999999999999999887
Q ss_pred H
Q 001782 1001 L 1001 (1013)
Q Consensus 1001 L 1001 (1013)
-
T Consensus 292 y 292 (1431)
T KOG1240|consen 292 Y 292 (1431)
T ss_pred h
Confidence 3
No 435
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.79 E-value=9.7e-19 Score=177.78 Aligned_cols=139 Identities=19% Similarity=0.158 Sum_probs=110.1
Q ss_pred CCceeeccceEEEEEEECCCCeEEEEEEEeeccccc--------------------------hhHHHHHHHHHhcCCCCc
Q 001782 704 SNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGA--------------------------TKSFVAECEALRNIRHRN 757 (1013)
Q Consensus 704 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~n 757 (1013)
.+.||+|++|.||+|.+. +|+.||||+++...... ...+..|.+.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 578999999999999987 89999999998542110 112357899999999988
Q ss_pred cceEEEEeecCCccccceEEEEEeeccCCCHHHH-hhccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeeecC
Q 001782 758 LIKIITVCSSIDFEEVDFKAIVYEYMECGSLEDW-LHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHH-HCHPPIVHGD 835 (1013)
Q Consensus 758 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~ivH~D 835 (1013)
+.....+.. ...++||||++++++... +.. ..++..++..++.|++.++.++|+ . ||+|||
T Consensus 81 i~~p~~~~~-------~~~~lVmE~~~g~~~~~~~l~~-------~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrD 143 (190)
T cd05145 81 VPVPEPILL-------KKNVLVMEFIGDDGSPAPRLKD-------VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGD 143 (190)
T ss_pred CCCceEEEe-------cCCEEEEEEecCCCchhhhhhh-------ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCC
Confidence 754444321 124899999998755433 322 356788999999999999999999 8 999999
Q ss_pred CCCCceEecCCCceEEccccccccCC
Q 001782 836 LKPSNVLLDHDMVAHVGDFGLARFLP 861 (1013)
Q Consensus 836 lkp~NIll~~~~~~kl~DFG~a~~~~ 861 (1013)
|||+||+++ ++.++|+|||++....
T Consensus 144 lkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 144 LSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred CChhhEEEE-CCCEEEEEcccceecC
Confidence 999999998 8899999999998653
No 436
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=8.4e-19 Score=173.73 Aligned_cols=192 Identities=17% Similarity=0.087 Sum_probs=138.3
Q ss_pred CCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc----chhHHHHHHHHHhcCC-CCccceEEEEeecCCccccceE
Q 001782 702 SSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG----ATKSFVAECEALRNIR-HRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 702 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
.+...|++|+||+||.+.. .+.+++.+.+...... ....+.+|+++|+++. |+++++++++ ...
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---------~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---------DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---------cCE
Confidence 4668899999999998776 5667887776533321 1225789999999995 5889999886 346
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCC-CCCceEecCCCceEEcccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDL-KPSNVLLDHDMVAHVGDFG 855 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~DFG 855 (1013)
+++|||+.|.+|.+.... ....++.|++.+++++|++ ||+|||| ||+||+++.++.++|+|||
T Consensus 74 ~lvmeyI~G~~L~~~~~~-------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG 137 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR-------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQ 137 (218)
T ss_pred EEEEeeecCccHHhhhhh-------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECC
Confidence 899999998888654321 1135778999999999999 9999999 7999999999999999999
Q ss_pred ccccCCCCCCC-ccccCCC----CCcccccccccccccccCCC-CCC-cccchHHHHHHHHHHHhCCCCCCC
Q 001782 856 LARFLPPCSPA-TILETPS----SSTGIKGTVGYVAPEYGMGG-DMS-ATGDVYSFGILLLEMFTRRRPTDN 920 (1013)
Q Consensus 856 ~a~~~~~~~~~-~~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~-~~~DIwSlG~il~ell~G~~pf~~ 920 (1013)
+|....+.... ....... .......++.|++|+...-- ..+ .+.+.++-|+-+|.++||+.|...
T Consensus 138 ~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 138 LAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred CceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 99855432210 0000000 01112256777777753321 233 567889999999999999988654
No 437
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.77 E-value=2.1e-20 Score=171.44 Aligned_cols=177 Identities=27% Similarity=0.436 Sum_probs=124.9
Q ss_pred CCCCCCEEEccCCccCccCCccccccCccCEEEcCCCcccCCCCcccccCcccceeecccccccccCCchhhcccchhhh
Q 001782 413 ELRNLQVLDLHHNNLDGHIPESLGNLTILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSIL 492 (1013)
Q Consensus 413 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~ 492 (1013)
++..++.|.|++|+++ .+|..+..+.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++.
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~---------------- 92 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN---------------- 92 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh----------------
Confidence 3445555555555555 44445555555555555555555 45555555555555555555544
Q ss_pred hccCCCeecccCCccccCcCCCcEEEccCCCCCC-CCccccccccccccccccccccccccCccccccCCCCeEeccccc
Q 001782 493 LDLSGNLLTGSIPAEVGNLKNLVQLGLSENRFSN-EIPVSLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRNN 571 (1013)
Q Consensus 493 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 571 (1013)
..|..|+.++.|+.|||..|.+.. ..|..|..++.|+-|+|++|.+. .+|..++++++|+.|.+.+|.
T Consensus 93 ----------~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdnd 161 (264)
T KOG0617|consen 93 ----------ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDND 161 (264)
T ss_pred ----------cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCc
Confidence 566777777777777777777753 46778888888888888888888 788888888999999998888
Q ss_pred cccccccccccccccceeecCCccCCCCCCCCCccC---CCcceeeeCCcC
Q 001782 572 LSGQIPEFLENLSFLEYLNLSYNHLEGEVPRRGVFS---NKTRFYFTGNKR 619 (1013)
Q Consensus 572 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~---~~~~~~~~~N~~ 619 (1013)
+- ..|..++.++.|++|.+.+|+++-.+|+.+.+. +.....+..|||
T Consensus 162 ll-~lpkeig~lt~lrelhiqgnrl~vlppel~~l~l~~~k~v~r~E~NPw 211 (264)
T KOG0617|consen 162 LL-SLPKEIGDLTRLRELHIQGNRLTVLPPELANLDLVGNKQVMRMEENPW 211 (264)
T ss_pred hh-hCcHHHHHHHHHHHHhcccceeeecChhhhhhhhhhhHHHHhhhhCCC
Confidence 87 688888889999999999999988888765543 233455678887
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=5.2e-20 Score=168.88 Aligned_cols=164 Identities=34% Similarity=0.566 Sum_probs=144.6
Q ss_pred cccccceeecccccccCCcccccCCCCCCCEEEccCCccCccCCccccccCccCEEEcCCCcccCCCCcccccCccccee
Q 001782 389 NLVNLNGFGLEYNQLTGPIPHAIGELRNLQVLDLHHNNLDGHIPESLGNLTILNSLDLGFNKLRGHVPSSLGNCQNLMLL 468 (1013)
Q Consensus 389 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 468 (1013)
++.+++.|.|++|+++ .+|..+..+.+|+.|++++|+++ .+|..++.+++|+.|+++-|++. ..|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 4567888999999999 77888999999999999999999 78999999999999999999998 899999999999999
Q ss_pred ecccccccc-cCCchhhcccchhhhhccCCCeecccCCccccCcCCCcEEEccCCCCCCCCccccccccccccccccccc
Q 001782 469 SVSNNKLTG-ALPPQILGIVTLSILLDLSGNLLTGSIPAEVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNS 547 (1013)
Q Consensus 469 ~L~~N~l~~-~~p~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 547 (1013)
||++|++.. .+|..+|. +..|+.|+|+.|.+. .+|..++++++|+.|.+..|.+- ..|.+++.+++|++|++.+|+
T Consensus 108 dltynnl~e~~lpgnff~-m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFY-MTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred hccccccccccCCcchhH-HHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccce
Confidence 999999974 56777776 788888899999988 78888889999999999988887 788888888888888888888
Q ss_pred cccccCcccccc
Q 001782 548 LTGSIPLALKTL 559 (1013)
Q Consensus 548 l~~~~p~~~~~l 559 (1013)
++ .+|..++++
T Consensus 185 l~-vlppel~~l 195 (264)
T KOG0617|consen 185 LT-VLPPELANL 195 (264)
T ss_pred ee-ecChhhhhh
Confidence 88 667666553
No 439
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=1.2e-18 Score=206.99 Aligned_cols=201 Identities=20% Similarity=0.244 Sum_probs=158.8
Q ss_pred hhhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCC---CCccceEEEEeecCC
Q 001782 693 DLSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIR---HRNLIKIITVCSSID 769 (1013)
Q Consensus 693 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~ 769 (1013)
+.+.....|.|.+.||+|+||.||+|.... ++.||+|+-+.... -+|.--.+++.+++ -+.|+.+..++
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~---- 763 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAH---- 763 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHH----
Confidence 334445688999999999999999999986 99999999765543 23333444555555 23344444332
Q ss_pred ccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC----
Q 001782 770 FEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH---- 845 (1013)
Q Consensus 770 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---- 845 (1013)
...+.-++|+||.+.|+|.+++... +.+++.-++.++.|+++.+++||.. +||||||||+|+++..
T Consensus 764 -~~~~~S~lv~ey~~~Gtlld~~N~~------~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~ 833 (974)
T KOG1166|consen 764 -VFQNASVLVSEYSPYGTLLDLINTN------KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICA 833 (974)
T ss_pred -ccCCcceeeeeccccccHHHhhccC------CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCC
Confidence 2335678999999999999999954 6789999999999999999999999 9999999999999942
Q ss_pred ---CCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCC
Q 001782 846 ---DMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRP 917 (1013)
Q Consensus 846 ---~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~p 917 (1013)
...++|+|||.+-.+..- .........++|-.+-.+|+..|.++++++|.|.++.+++-|+.|++.
T Consensus 834 ~~~~~~l~lIDfG~siDm~lf------p~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 834 DSDSKGLYLIDFGRSIDMKLF------PDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred CCcccceEEEecccceeeeEc------CCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 346899999998755321 122235567789999999999999999999999999999999999764
No 440
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.74 E-value=6.8e-18 Score=187.87 Aligned_cols=217 Identities=29% Similarity=0.434 Sum_probs=164.1
Q ss_pred HhcCCCCccceEEEEeecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 001782 750 LRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHP 829 (1013)
Q Consensus 750 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~ 829 (1013)
|+.+.|.|+.+++|.+... ...+.|.+||..|+|.+.+.... ..+++.....+.++|+.|++|+|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~~~-----~~~d~~F~~s~~rdi~~Gl~ylh~s--- 67 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSNED-----IKLDYFFILSFIRDISKGLAYLHNS--- 67 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhccc-----cCccHHHHHHHHHHHHHHHHHHhcC---
Confidence 4567899999999998543 78899999999999999998742 4788999999999999999999998
Q ss_pred Ce-eecCCCCCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCC-------CCcccch
Q 001782 830 PI-VHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGD-------MSATGDV 901 (1013)
Q Consensus 830 ~i-vH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DI 901 (1013)
.| .|+.+++.|.++|..+.+|++|||+........ .........-..-|.|||.+.+.. .+.++||
T Consensus 68 ~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~------~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdi 141 (484)
T KOG1023|consen 68 PIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETA------EPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDI 141 (484)
T ss_pred cceeeeeeccccceeeeeEEEEechhhhcccccccc------cccccchhHHHHhccCHHHhcccccccccccccccCCe
Confidence 55 999999999999999999999999988664310 011112222456799999987641 4667999
Q ss_pred HHHHHHHHHHHhCCCCCCCcCCCCccHHHHHHhhCChhHHHhhhhhhc-cchhhhhccCCCCchhHHHHHHHHHHHHHHh
Q 001782 902 YSFGILLLEMFTRRRPTDNMFNDGLTLHEFAKMALPEKVMEIVDPLLL-LDLEARASNCGSHRTEIAKIEECLVAIVRIG 980 (1013)
Q Consensus 902 wSlG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~ 980 (1013)
||||++++|+++.+.||+........ .+++.+... .. ...++.+....+..+.+..++
T Consensus 142 Ys~~ii~~ei~~r~~~~~~~~~~~~~-------------~eii~~~~~~~~--------~~~rP~i~~~~e~~~~l~~l~ 200 (484)
T KOG1023|consen 142 YSFGIIMYEILFRSGPFDLRNLVEDP-------------DEIILRVKKGGS--------NPFRPSIELLNELPPELLLLV 200 (484)
T ss_pred ehHHHHHHHHHhccCccccccccCCh-------------HHHHHHHHhcCC--------CCcCcchhhhhhcchHHHHHH
Confidence 99999999999999999874333221 111111111 11 112333333334555789999
Q ss_pred hhcccCCCCCCCCHHHHHHHHHHhhh
Q 001782 981 VLCSMESPSERIQMTDVVAKLCSARK 1006 (1013)
Q Consensus 981 ~~cl~~dP~~RPs~~evl~~L~~~~~ 1006 (1013)
.+||..+|.+||++++|-..++.+..
T Consensus 201 ~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 201 ARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred HHhcccChhhCccHHHHHhhhhhhcc
Confidence 99999999999999999988887754
No 441
>PRK10345 hypothetical protein; Provisional
Probab=99.74 E-value=1.9e-17 Score=168.46 Aligned_cols=141 Identities=16% Similarity=0.206 Sum_probs=107.5
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcC-----CCCccceEEEEeecCCccccce
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNI-----RHRNLIKIITVCSSIDFEEVDF 775 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~ 775 (1013)
+.-.+.||+|+||.||. +..+... +||++........+.+.+|+.+++.+ .||||++++|++.+.. ..+..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~-g~g~v 79 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC-GTGYV 79 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC-CCeEE
Confidence 34457899999999995 5555554 69998765444567799999999999 5799999999975431 11122
Q ss_pred EEEEEee--ccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHH-HHHhhcCCCCeeecCCCCCceEecCC----Cc
Q 001782 776 KAIVYEY--MECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAI-EYLHHHCHPPIVHGDLKPSNVLLDHD----MV 848 (1013)
Q Consensus 776 ~~lv~e~--~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L-~~LH~~~~~~ivH~Dlkp~NIll~~~----~~ 848 (1013)
..+|+|| +.+++|.+++... .+++. ..++.|++.++ +|||++ +|+||||||+||+++.. +.
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~-------~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~ 147 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC-------RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVI 147 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc-------cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCc
Confidence 4478999 5579999999653 34444 35678888777 999999 99999999999999743 48
Q ss_pred eEEcccccc
Q 001782 849 AHVGDFGLA 857 (1013)
Q Consensus 849 ~kl~DFG~a 857 (1013)
++|+||+-+
T Consensus 148 ~~LiDg~G~ 156 (210)
T PRK10345 148 PVVCDNIGE 156 (210)
T ss_pred EEEEECCCC
Confidence 999995433
No 442
>smart00090 RIO RIO-like kinase.
Probab=99.72 E-value=3e-17 Score=171.69 Aligned_cols=142 Identities=19% Similarity=0.130 Sum_probs=112.1
Q ss_pred cCCCCCceeeccceEEEEEE-ECCCCeEEEEEEEeecccc------------------------chhHHHHHHHHHhcCC
Q 001782 700 DFSSSNMIGQGSFGFVYRGN-LGENEMAVAVKVMNLKQRG------------------------ATKSFVAECEALRNIR 754 (1013)
Q Consensus 700 ~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 754 (1013)
-|++.+.||+|+||.||+|. +..+++.||+|+++..... ....+..|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999999999998 6668999999999743210 0123568999999997
Q ss_pred C--CccceEEEEeecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-e
Q 001782 755 H--RNLIKIITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPP-I 831 (1013)
Q Consensus 755 h--~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~-i 831 (1013)
+ ..+.+++++ ...++||||+++.++..+.... ......++..++.|++.++++||++ | +
T Consensus 109 ~~~i~~p~~~~~---------~~~~lV~E~~~g~~L~~~~~~~------~~~~~~~~~~i~~qi~~~l~~LH~~---g~i 170 (237)
T smart00090 109 EAGVPVPKPIAW---------RRNVLVMEFIGGDGLPAPRLKD------VEPEEEEEFELYDDILEEMRKLYKE---GEL 170 (237)
T ss_pred hcCCCCCeeeEe---------cCceEEEEEecCCccccccccc------CCcchHHHHHHHHHHHHHHHHHHhc---CCE
Confidence 5 334455543 2347999999988887654322 2455667789999999999999999 9 9
Q ss_pred eecCCCCCceEecCCCceEEccccccccC
Q 001782 832 VHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 832 vH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
+||||||+||+++ ++.++|+|||.+...
T Consensus 171 iH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 171 VHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 9999999999999 889999999998743
No 443
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=4e-19 Score=198.02 Aligned_cols=280 Identities=24% Similarity=0.272 Sum_probs=141.8
Q ss_pred EEEeeeccccc-cCCCCCCCCCCCceEEcccCccccc----ccccccCCCCccccccccCcCCCCCCCChhhhhhccccc
Q 001782 274 NLSVRQNNYTG-SLPHSLSNASNLRLLDFSLNHFSGQ----VKIDFNRLPNLFRLSFSKNNLGTGAIGDLDFIAHLTNCS 348 (1013)
Q Consensus 274 ~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~ 348 (1013)
.|+|..+.+++ ..+..+..+.+|+.|+++++.++.. ++..+...+++++|+++++.+.....+......
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~------ 75 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQ------ 75 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHH------
Confidence 45666666662 3334445566677777777776432 222344455556666655544310000001111
Q ss_pred ccccccccccccCCccchhhhcchhhHHHHhccchhHHhhcccccceeecccccccCCcccccCCCCC---CCEEEccCC
Q 001782 349 KLEALGLDTNIFGGVLPLSIANLSSTIILFSMGLNQIYVKNLVNLNGFGLEYNQLTGPIPHAIGELRN---LQVLDLHHN 425 (1013)
Q Consensus 349 ~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~---L~~L~L~~N 425 (1013)
.+..+++|+.|++++|.+.+..+..+..+.+ |++|++++|
T Consensus 76 -------------------------------------~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~ 118 (319)
T cd00116 76 -------------------------------------GLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNN 118 (319)
T ss_pred -------------------------------------HHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCC
Confidence 2333455555566555555444444444433 666666666
Q ss_pred ccCc----cCCcccccc-CccCEEEcCCCcccCC----CCcccccCcccceeecccccccccCCchhhcc---cchhhhh
Q 001782 426 NLDG----HIPESLGNL-TILNSLDLGFNKLRGH----VPSSLGNCQNLMLLSVSNNKLTGALPPQILGI---VTLSILL 493 (1013)
Q Consensus 426 ~l~~----~~p~~~~~l-~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~---~~~l~~L 493 (1013)
++++ .+...+..+ ++|+.|++++|.+++. ++..+..+++|+.|++++|.+++.....+... .+.|+.|
T Consensus 119 ~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L 198 (319)
T cd00116 119 GLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVL 198 (319)
T ss_pred ccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEE
Confidence 6652 222233444 5666666666666532 22334445566666666666653211111111 2245555
Q ss_pred ccCCCeeccc----CCccccCcCCCcEEEccCCCCCCCCcccccc-----cccccccccccccccc----ccCccccccC
Q 001782 494 DLSGNLLTGS----IPAEVGNLKNLVQLGLSENRFSNEIPVSLSA-----CTTLEYLYMEGNSLTG----SIPLALKTLK 560 (1013)
Q Consensus 494 ~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~----~~p~~~~~l~ 560 (1013)
++++|.+++. ++..+..+++|++|++++|.+++.....+.. .++|++|++++|.++. .+...+..++
T Consensus 199 ~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~ 278 (319)
T cd00116 199 DLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKE 278 (319)
T ss_pred eccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCC
Confidence 5555555422 2233445666777777777766433333221 2567777777776651 2233444556
Q ss_pred CCCeEeccccccccc----cccccccc-cccceeecCCccC
Q 001782 561 SIKELDLSRNNLSGQ----IPEFLENL-SFLEYLNLSYNHL 596 (1013)
Q Consensus 561 ~L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~l~~N~l 596 (1013)
+|+++++++|.++.. ....+... +.|+.+++.+|++
T Consensus 279 ~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 279 SLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 677777777777643 33333333 5666666666653
No 444
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.71 E-value=1.2e-18 Score=192.76 Aligned_cols=221 Identities=24% Similarity=0.292 Sum_probs=171.7
Q ss_pred ceeeccceEEEEEEE---CCCCeEEEEEEEeecccc--chhHHHHHHHHHhcCC-CCccceEEEEeecCCccccceEEEE
Q 001782 706 MIGQGSFGFVYRGNL---GENEMAVAVKVMNLKQRG--ATKSFVAECEALRNIR-HRNLIKIITVCSSIDFEEVDFKAIV 779 (1013)
Q Consensus 706 ~lg~G~~g~V~~~~~---~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv 779 (1013)
++|+|.||.|+.++- ...+..+|+|+.+..... .......|..++...+ ||.++++.-. ++.+...+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhya-----fqt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYA-----FQTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeee-----eccccchhHh
Confidence 379999999987654 334677899888643221 1124566888888886 9999998877 4566888999
Q ss_pred EeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccccc
Q 001782 780 YEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARF 859 (1013)
Q Consensus 780 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 859 (1013)
++|..+|.+...+... ..+++.....+...++-|++++|+. +++|||+|++||+++.+|++|+.|||.++.
T Consensus 76 ld~~rgg~lft~l~~~------~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske 146 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSKE------VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKE 146 (612)
T ss_pred hhhcccchhhhccccC------CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhH
Confidence 9999999998888765 4678888888999999999999999 999999999999999999999999999985
Q ss_pred CCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHHHHH--hhC-
Q 001782 860 LPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHEFAK--MAL- 936 (1013)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~~~~--~~~- 936 (1013)
.-. . ...+||..|||||++. ....++|.||||++++||++|..||.. .....+.+ ...
T Consensus 147 ~v~--------~----~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-----~~~~~Il~~~~~~p 207 (612)
T KOG0603|consen 147 AVK--------E----KIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-----DTMKRILKAELEMP 207 (612)
T ss_pred hHh--------h----hhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-----HHHHHHhhhccCCc
Confidence 421 1 1128999999999988 677899999999999999999999986 12222222 112
Q ss_pred ---ChhHHHhhhhhhccchhhhhccC
Q 001782 937 ---PEKVMEIVDPLLLLDLEARASNC 959 (1013)
Q Consensus 937 ---~~~~~~~i~~~l~~~~~~R~~~~ 959 (1013)
...++.+++.+...+|..|....
T Consensus 208 ~~l~~~a~~~~~~l~~r~p~nrLg~~ 233 (612)
T KOG0603|consen 208 RELSAEARSLFRQLFKRNPENRLGAG 233 (612)
T ss_pred hhhhHHHHHHHHHHHhhCHHHHhccC
Confidence 23466777777777877776554
No 445
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=4.3e-19 Score=197.73 Aligned_cols=288 Identities=24% Similarity=0.300 Sum_probs=146.9
Q ss_pred eeeecccccC-CCCCCccccccccceeecccccccCC----CcchhccCCccceeeccCCccCCCCCCCcCCCCCCCcEE
Q 001782 201 VLSIGENRLS-GRLPDSLGQLRSLYYLSISENAFSGM----FPSSIFNISSLESISLLGNRLEGSLPVNIGFSLPNLENL 275 (1013)
Q Consensus 201 ~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L 275 (1013)
.|+|..+.++ ...+..|..+.+|+.|+++++.++.. ++..+...++|++|+++++.+.+ .+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~---------- 70 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGL---------- 70 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHH----------
Confidence 4666667666 34445556666677777777776432 33444555566666666665541 11110
Q ss_pred EeeeccccccCCCCCCCCCCCceEEcccCcccccccccccCCCC---ccccccccCcCCCCCCCChhhhhhccccccccc
Q 001782 276 SVRQNNYTGSLPHSLSNASNLRLLDFSLNHFSGQVKIDFNRLPN---LFRLSFSKNNLGTGAIGDLDFIAHLTNCSKLEA 352 (1013)
Q Consensus 276 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~---L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~ 352 (1013)
..++..+.++++|+.|++++|.+.+..+..+..+.+ |+.|++++|+++..... .+..
T Consensus 71 --------~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~--~l~~---------- 130 (319)
T cd00116 71 --------QSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLR--LLAK---------- 130 (319)
T ss_pred --------HHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHH--HHHH----------
Confidence 122334445556666666666665433333333333 55555555544321000 0001
Q ss_pred ccccccccCCccchhhhcchhhHHHHhccchhHHhhcc-cccceeecccccccC----CcccccCCCCCCCEEEccCCcc
Q 001782 353 LGLDTNIFGGVLPLSIANLSSTIILFSMGLNQIYVKNL-VNLNGFGLEYNQLTG----PIPHAIGELRNLQVLDLHHNNL 427 (1013)
Q Consensus 353 L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l-~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l 427 (1013)
.+..+ ++|+.|++++|.+++ .++..+..+++|++|++++|.+
T Consensus 131 ---------------------------------~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l 177 (319)
T cd00116 131 ---------------------------------GLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGI 177 (319)
T ss_pred ---------------------------------HHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCC
Confidence 11222 445555555555552 1233455556677777777776
Q ss_pred Ccc----CCccccccCccCEEEcCCCcccCC----CCcccccCcccceeecccccccccCCchhhcccchhhhhccCCCe
Q 001782 428 DGH----IPESLGNLTILNSLDLGFNKLRGH----VPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSILLDLSGNL 499 (1013)
Q Consensus 428 ~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~Ls~N~ 499 (1013)
++. ++..+..+++|+.|+|++|.+++. ++..+..+++|++|++++|.+++.....+...+
T Consensus 178 ~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~------------ 245 (319)
T cd00116 178 GDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASAL------------ 245 (319)
T ss_pred chHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHH------------
Confidence 632 223344455777777777776532 233455566777777777776642222221110
Q ss_pred ecccCCccccCcCCCcEEEccCCCCCC----CCccccccccccccccccccccccc----cCcccccc-CCCCeEecccc
Q 001782 500 LTGSIPAEVGNLKNLVQLGLSENRFSN----EIPVSLSACTTLEYLYMEGNSLTGS----IPLALKTL-KSIKELDLSRN 570 (1013)
Q Consensus 500 l~~~~~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l-~~L~~L~Ls~N 570 (1013)
+ ...+.|+.|++++|.++. .++..+..+++|+++++++|.++.. ....+... +.|++|++.+|
T Consensus 246 -----~---~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (319)
T cd00116 246 -----L---SPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDD 317 (319)
T ss_pred -----h---ccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCC
Confidence 0 023456666666666652 1233344455666666666666633 23333333 56677777666
Q ss_pred cc
Q 001782 571 NL 572 (1013)
Q Consensus 571 ~l 572 (1013)
.+
T Consensus 318 ~~ 319 (319)
T cd00116 318 SF 319 (319)
T ss_pred CC
Confidence 53
No 446
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.71 E-value=3.4e-18 Score=185.77 Aligned_cols=129 Identities=31% Similarity=0.501 Sum_probs=110.8
Q ss_pred ceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcc
Q 001782 774 DFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGD 853 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 853 (1013)
.+.++.|++|+-.+|.+|+...+.. ...++.....++.|++.|++| + +.+|+|+||.||++..+..+||.|
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~---e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgD 399 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTG---EERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGD 399 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcc---cccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhh
Confidence 4688999999999999999865442 466788899999999999999 6 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHh
Q 001782 854 FGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFT 913 (1013)
Q Consensus 854 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~ 913 (1013)
||+......+. .............||..||+||++.+..|+.++||||||++++|++.
T Consensus 400 Fgl~ts~~~~~--~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 400 FGLVTSQDKDE--TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhheeecccCC--cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 99987665443 11222334567789999999999999999999999999999999998
No 447
>PLN03150 hypothetical protein; Provisional
Probab=99.69 E-value=4.1e-17 Score=194.69 Aligned_cols=149 Identities=31% Similarity=0.539 Sum_probs=125.9
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCc----eeEEEEeCC--CC--CeeEEEeeccccccccCccccCCCCCCC
Q 001782 32 SNETDRLALLAIKSQLQDPLGVTSSWNNSMNLC----QWTGVTCGH--RH--QRVTVLDLSNRSIEGILSPYVGNLSFLR 103 (1013)
Q Consensus 32 ~~~~~~~aLl~~k~~~~~~~~~~~sw~~~~~~c----~w~gv~C~~--~~--~~v~~l~l~~~~l~~~~~~~l~~l~~L~ 103 (1013)
+.+.|..||++||+++.++.. .+|+++ .|| .|.||+|+. .. .+|+.|+|+++++.|.+|+.++.|++|+
T Consensus 369 t~~~~~~aL~~~k~~~~~~~~--~~W~g~-~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~ 445 (623)
T PLN03150 369 TLLEEVSALQTLKSSLGLPLR--FGWNGD-PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQ 445 (623)
T ss_pred cCchHHHHHHHHHHhcCCccc--CCCCCC-CCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCC
Confidence 466799999999999977643 489743 342 799999953 22 3699999999999999999999999999
Q ss_pred eeeeccCCccccCCcccCCcccceEEeccCCccccCCCCccccCCCCceeccccccccCCCCCccccccccccceecccc
Q 001782 104 FINFANNGFSGEIPGEIGRLFRLETLILANNSFSGKIPSNLSRCSNLINFHARGNNLVGQIPPDIGYSWLKLEFLSLRDN 183 (1013)
Q Consensus 104 ~L~l~~n~l~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~L~~n 183 (1013)
.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..+++|++|++|+|++|+++|.+|..+.....++..+++.+|
T Consensus 446 ~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N 525 (623)
T PLN03150 446 SINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDN 525 (623)
T ss_pred EEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999876533333444444444
No 448
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.66 E-value=6.9e-16 Score=158.38 Aligned_cols=142 Identities=25% Similarity=0.187 Sum_probs=110.7
Q ss_pred hhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc----------------------chhHHHHHHHHHh
Q 001782 694 LSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG----------------------ATKSFVAECEALR 751 (1013)
Q Consensus 694 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~ 751 (1013)
+......|.+.+.||+|+||.||+|... +++.||||+++..... .......|+.++.
T Consensus 10 ~~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 10 LVKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 3333445888899999999999999885 7889999997643210 0123567888898
Q ss_pred cCCCC--ccceEEEEeecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 001782 752 NIRHR--NLIKIITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHP 829 (1013)
Q Consensus 752 ~l~h~--niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~ 829 (1013)
.+.|+ .+...++. ...++||||+++++|.+.... .....++.+++.++.++|+.
T Consensus 89 ~l~~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~------------~~~~~~~~~i~~~l~~lh~~--- 144 (198)
T cd05144 89 ALYEEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL------------EDPEEVLDEILEEIVKAYKH--- 144 (198)
T ss_pred HHHHcCCCCCceeec---------CCceEEEEEeCCcchhhcccc------------ccHHHHHHHHHHHHHHHHHC---
Confidence 88777 44555443 335899999999998765431 23467889999999999999
Q ss_pred CeeecCCCCCceEecCCCceEEccccccccC
Q 001782 830 PIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 830 ~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
|++||||||+||++++++.++|+|||.+...
T Consensus 145 gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 145 GIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred CCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 9999999999999999999999999998644
No 449
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.63 E-value=2.5e-16 Score=182.80 Aligned_cols=210 Identities=26% Similarity=0.371 Sum_probs=143.1
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
..+|..++.|..|+||.||.++++.+.+.+|+|+=+ +. .+++ ||..+-+ ..+
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~-----------lilR-----nilt~a~-----------npf 133 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QN-----------LILR-----NILTFAG-----------NPF 133 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccc-cc-----------hhhh-----ccccccC-----------Ccc
Confidence 458889999999999999999999999999995432 11 0111 1222111 112
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
.| |+-.+.++.. +.++.. ++.+++|+|+. ||+|||+||+|.+|+.-|++|++|||++
T Consensus 134 vv------gDc~tllk~~------g~lPvd--------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLs 190 (1205)
T KOG0606|consen 134 VV------GDCATLLKNI------GPLPVD--------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLS 190 (1205)
T ss_pred ee------chhhhhcccC------CCCcch--------hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhh
Confidence 22 3333333332 233322 27899999999 9999999999999999999999999998
Q ss_pred ccCCCCCCC-----cc--ccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccHHH
Q 001782 858 RFLPPCSPA-----TI--LETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHE 930 (1013)
Q Consensus 858 ~~~~~~~~~-----~~--~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~~~ 930 (1013)
+........ ++ ....-.....+||+.|+|||++....|+..+|.|++|+++||.+.|..||.....++ .+..
T Consensus 191 k~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee-lfg~ 269 (1205)
T KOG0606|consen 191 KKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-LFGQ 269 (1205)
T ss_pred hhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH-HHhh
Confidence 753211100 00 111122456689999999999999999999999999999999999999998742221 1222
Q ss_pred HHH---------hhCChhHHHhhhhhhccchhhhhccC
Q 001782 931 FAK---------MALPEKVMEIVDPLLLLDLEARASNC 959 (1013)
Q Consensus 931 ~~~---------~~~~~~~~~~i~~~l~~~~~~R~~~~ 959 (1013)
++. ...+.++++++++++...|..|....
T Consensus 270 visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 270 VISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred hhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 221 12345677777777777776665544
No 450
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.63 E-value=2e-15 Score=157.11 Aligned_cols=133 Identities=24% Similarity=0.333 Sum_probs=109.0
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecccc--------chhHHHHHHHHHhcCCCCccceEEEEeecCCccccceE
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG--------ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFK 776 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 776 (1013)
+.||+|++|.||+|.+ .+..|++|+....... ...++.+|++++..+.|+++.....++. .....
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFV-----DPENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEE-----eCCCC
Confidence 6799999999999988 4667899986533211 1235778999999999988876666543 23567
Q ss_pred EEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccc
Q 001782 777 AIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGL 856 (1013)
Q Consensus 777 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 856 (1013)
++||||++|++|.+++... .. ++..++.+++.++.++|+. +++|||++|+||+++ ++.++++|||.
T Consensus 75 ~lv~e~~~G~~L~~~~~~~---------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSN---------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred EEEEEEeCCcCHHHHHHhc---------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCc
Confidence 8999999999999998643 11 7889999999999999999 999999999999999 78999999998
Q ss_pred cc
Q 001782 857 AR 858 (1013)
Q Consensus 857 a~ 858 (1013)
+.
T Consensus 141 a~ 142 (211)
T PRK14879 141 AE 142 (211)
T ss_pred cc
Confidence 86
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.62 E-value=2.9e-15 Score=177.37 Aligned_cols=141 Identities=26% Similarity=0.316 Sum_probs=110.7
Q ss_pred hhhhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeec--cc------cchhHHHHHHHHHhcCCCCccceEEEEe
Q 001782 694 LSKATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLK--QR------GATKSFVAECEALRNIRHRNLIKIITVC 765 (1013)
Q Consensus 694 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~ 765 (1013)
.......|...+.||+|+||+||+|.+.... +++|+.... .. ...+++.+|+++++.++|++++....++
T Consensus 328 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~ 405 (535)
T PRK09605 328 EEEVKRRKIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYD 405 (535)
T ss_pred ccccccccCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEE
Confidence 3344456677899999999999999886443 444433211 11 1134688999999999999998877664
Q ss_pred ecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC
Q 001782 766 SSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH 845 (1013)
Q Consensus 766 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 845 (1013)
.. ....++||||+++++|.+++. ....++.|++.++.+||+. +++|||+||+||++ .
T Consensus 406 ~~-----~~~~~lv~E~~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~ 462 (535)
T PRK09605 406 VD-----PEEKTIVMEYIGGKDLKDVLE--------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-R 462 (535)
T ss_pred Ee-----CCCCEEEEEecCCCcHHHHHH--------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-E
Confidence 32 245689999999999998875 2467899999999999999 99999999999999 6
Q ss_pred CCceEEcccccccc
Q 001782 846 DMVAHVGDFGLARF 859 (1013)
Q Consensus 846 ~~~~kl~DFG~a~~ 859 (1013)
++.++|+|||+++.
T Consensus 463 ~~~~~liDFGla~~ 476 (535)
T PRK09605 463 DDRLYLIDFGLGKY 476 (535)
T ss_pred CCcEEEEeCccccc
Confidence 78999999999874
No 452
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.59 E-value=4.6e-15 Score=152.74 Aligned_cols=130 Identities=27% Similarity=0.414 Sum_probs=102.2
Q ss_pred ceeeccceEEEEEEECCCCeEEEEEEEeecccc--------chhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEE
Q 001782 706 MIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG--------ATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKA 777 (1013)
Q Consensus 706 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 777 (1013)
.||+|+||.||+|.+ ++..|++|+....... ..+++.+|+++++.+.|+++.....++. .....+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDV-----DPDNKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-----ECCCCE
Confidence 489999999999996 4677999986532211 1245778999999998876544333322 224568
Q ss_pred EEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 778 IVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 778 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
+||||++|++|.+++.... . .++.|++.++.++|+. +++|||++|+||+++ ++.++++|||.+
T Consensus 74 lv~e~~~g~~l~~~~~~~~------~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a 136 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGN------D-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLG 136 (199)
T ss_pred EEEEEECCccHHHHHhhcH------H-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCC
Confidence 9999999999998875431 0 7899999999999999 999999999999999 889999999998
Q ss_pred cc
Q 001782 858 RF 859 (1013)
Q Consensus 858 ~~ 859 (1013)
..
T Consensus 137 ~~ 138 (199)
T TIGR03724 137 KY 138 (199)
T ss_pred cC
Confidence 64
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.56 E-value=2e-14 Score=146.45 Aligned_cols=135 Identities=23% Similarity=0.234 Sum_probs=98.1
Q ss_pred CCceeeccceEEEEEEECCCCeEEEEEEEeeccccc--hhH----------------------HHHHHHHHhcCCCC--c
Q 001782 704 SNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGA--TKS----------------------FVAECEALRNIRHR--N 757 (1013)
Q Consensus 704 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~--n 757 (1013)
.+.||+|+||+||+|.+. +++.||||++....... ... ...|.+.+.++.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 578999999999999987 78899999987432211 111 13456666665433 3
Q ss_pred cceEEEEeecCCccccceEEEEEeeccCCCHHH-HhhccccccccCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeeecC
Q 001782 758 LIKIITVCSSIDFEEVDFKAIVYEYMECGSLED-WLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHH-HCHPPIVHGD 835 (1013)
Q Consensus 758 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~ivH~D 835 (1013)
+.+.+++ ...++||||++++++.. .+... ... .++..++.+++.++.++|. . +|+|||
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~-------~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~D 140 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKDV-------RLL-EDPEELYDQILELMRKLYREA---GLVHGD 140 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhhh-------hhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCC
Confidence 4555543 23589999999854321 11111 001 5678899999999999999 8 999999
Q ss_pred CCCCceEecCCCceEEccccccccC
Q 001782 836 LKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 836 lkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
|||+||+++ ++.++++|||.+...
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CChhhEEEE-CCcEEEEECcccccc
Confidence 999999999 899999999998744
No 454
>PLN03150 hypothetical protein; Provisional
Probab=99.55 E-value=1.3e-14 Score=173.46 Aligned_cols=118 Identities=38% Similarity=0.604 Sum_probs=101.8
Q ss_pred CCcEEEccCCCCCCCCccccccccccccccccccccccccCccccccCCCCeEeccccccccccccccccccccceeecC
Q 001782 513 NLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRNNLSGQIPEFLENLSFLEYLNLS 592 (1013)
Q Consensus 513 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 592 (1013)
.++.|+|++|.++|.+|..+..+++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..+.++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCC--CccCCCcceeeeCCcCCCCCCCCCCCCccc
Q 001782 593 YNHLEGEVPRR--GVFSNKTRFYFTGNKRLCGGLDELHLPVCH 633 (1013)
Q Consensus 593 ~N~l~~~~p~~--~~~~~~~~~~~~~N~~~c~~~~~~~~~~~~ 633 (1013)
+|+++|.+|.. ..+.....+.+.+|+.+|+.+. ...|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~---l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG---LRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC---CCCCc
Confidence 99999998864 2233456788999999998654 25675
No 455
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.53 E-value=3.8e-14 Score=138.99 Aligned_cols=135 Identities=19% Similarity=0.273 Sum_probs=110.8
Q ss_pred CCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCC--CccceEEEEeecCCccccceEEEEE
Q 001782 703 SSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRH--RNLIKIITVCSSIDFEEVDFKAIVY 780 (1013)
Q Consensus 703 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~ 780 (1013)
+.+.||+|.++.||++...+ ..+++|+...... ...+.+|+.+++.++| ..+++++++. ...+..+++|
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~-----~~~~~~~~v~ 72 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASG-----ESDGWSYLLM 72 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEc-----CCCCccEEEE
Confidence 45789999999999999854 6799998864433 4578899999999976 5888988874 3336789999
Q ss_pred eeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccccc
Q 001782 781 EYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARF 859 (1013)
Q Consensus 781 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 859 (1013)
||++++.+..+ +......++.+++.+++++|.....+++|+|++|+||++++++.+++.|||.++.
T Consensus 73 e~~~g~~~~~~-------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 73 EWIEGETLDEV-------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EecCCeecccC-------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99997766544 3346677899999999999996444799999999999999989999999999864
No 456
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.51 E-value=1.6e-13 Score=143.87 Aligned_cols=139 Identities=17% Similarity=0.139 Sum_probs=105.5
Q ss_pred CCcee-eccceEEEEEEECCCCeEEEEEEEeecc-------------ccchhHHHHHHHHHhcCCCCcc--ceEEEEeec
Q 001782 704 SNMIG-QGSFGFVYRGNLGENEMAVAVKVMNLKQ-------------RGATKSFVAECEALRNIRHRNL--IKIITVCSS 767 (1013)
Q Consensus 704 ~~~lg-~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~ 767 (1013)
...|| .||.|+||.++.. +..+++|.+.... .....++.+|++++.+++|+++ +..+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 35687 8999999999885 5678999885311 1223567889999999988774 677776432
Q ss_pred CCccccceEEEEEeeccC-CCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC
Q 001782 768 IDFEEVDFKAIVYEYMEC-GSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD 846 (1013)
Q Consensus 768 ~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 846 (1013)
. .......++|||++++ .+|.+++... .++.. .+.|++.++.+||+. ||+||||||+|||++.+
T Consensus 114 ~-~~~~~~~~lV~e~l~G~~~L~~~l~~~-------~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~ 178 (239)
T PRK01723 114 R-HGLFYRADILIERIEGARDLVALLQEA-------PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPD 178 (239)
T ss_pred e-cCcceeeeEEEEecCCCCCHHHHHhcC-------CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCC
Confidence 2 1111234699999997 6899888642 34433 357899999999999 99999999999999999
Q ss_pred CceEEcccccccc
Q 001782 847 MVAHVGDFGLARF 859 (1013)
Q Consensus 847 ~~~kl~DFG~a~~ 859 (1013)
+.++|+|||.+..
T Consensus 179 ~~v~LIDfg~~~~ 191 (239)
T PRK01723 179 GKFWLIDFDRGEL 191 (239)
T ss_pred CCEEEEECCCccc
Confidence 9999999998863
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.50 E-value=7.6e-16 Score=167.06 Aligned_cols=180 Identities=31% Similarity=0.451 Sum_probs=154.8
Q ss_pred CCCCCCCEEEccCCccCccCCccccccCccCEEEcCCCcccCCCCcccccCcccceeecccccccccCCchhhcccchhh
Q 001782 412 GELRNLQVLDLHHNNLDGHIPESLGNLTILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSI 491 (1013)
Q Consensus 412 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~ 491 (1013)
..+..-...||+.|++. .+|..+..+..|+.+.|+.|.|. .+|..++++..|++|||+.|+++ .+|..++. + -|+
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~-l-pLk 146 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCD-L-PLK 146 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhc-C-cce
Confidence 45666778899999998 78888888889999999999998 78999999999999999999998 78887765 3 356
Q ss_pred hhccCCCeecccCCccccCcCCCcEEEccCCCCCCCCccccccccccccccccccccccccCccccccCCCCeEeccccc
Q 001782 492 LLDLSGNLLTGSIPAEVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRNN 571 (1013)
Q Consensus 492 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 571 (1013)
.|-+++|+++ .+|+.++.+..|..||.+.|.+. .+|..++++.+|+.|++..|++. ..|..+..| .|..||+|.|+
T Consensus 147 vli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNk 222 (722)
T KOG0532|consen 147 VLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNK 222 (722)
T ss_pred eEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCc
Confidence 7788999998 78888998889999999999998 78888999999999999999998 678888865 58899999999
Q ss_pred cccccccccccccccceeecCCccCCCCCC
Q 001782 572 LSGQIPEFLENLSFLEYLNLSYNHLEGEVP 601 (1013)
Q Consensus 572 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 601 (1013)
++ .+|-.|.+|..|++|-|.+|+|+..+-
T Consensus 223 is-~iPv~fr~m~~Lq~l~LenNPLqSPPA 251 (722)
T KOG0532|consen 223 IS-YLPVDFRKMRHLQVLQLENNPLQSPPA 251 (722)
T ss_pred ee-ecchhhhhhhhheeeeeccCCCCCChH
Confidence 98 799999999999999999999986543
No 458
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.49 E-value=2e-15 Score=177.29 Aligned_cols=257 Identities=22% Similarity=0.252 Sum_probs=186.7
Q ss_pred hccCCCCCceeeccceEEEEEEECC-CCeEEEEEEEeecc--ccchhHHHHHHHHHhcCC-CCccceEEEEeecCCcccc
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGE-NEMAVAVKVMNLKQ--RGATKSFVAECEALRNIR-HRNLIKIITVCSSIDFEEV 773 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 773 (1013)
...|.+.+.||+|+|+.|-.+.... ....+|+|.+.... .........|..+-+.+. |+|++++++. ..+.
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~-----~~~~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEP-----SSSP 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCc-----cCCC
Confidence 4578888899999999999887743 34566777665432 222344556777777776 9999999998 4566
Q ss_pred ceEEEEEeeccCCCHHHHh-hccccccccCCCCHHHHHHHHHHHHHHHHHHh-hcCCCCeeecCCCCCceEecCCC-ceE
Q 001782 774 DFKAIVYEYMECGSLEDWL-HQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLH-HHCHPPIVHGDLKPSNVLLDHDM-VAH 850 (1013)
Q Consensus 774 ~~~~lv~e~~~~gsL~~~l-~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~-~~k 850 (1013)
+..+++++|.+++++.+-+ .... ...+...+-.++.|+..++.|+| +. +++|+|+||+|.+++..+ ..|
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~-----~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~ 165 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDS-----TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALK 165 (601)
T ss_pred cccccccCcccccccccccccCCc-----cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCccc
Confidence 8899999999999999888 3331 14566677889999999999999 87 999999999999999999 999
Q ss_pred EccccccccCCCCCCCccccCCCCCccccc-ccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcCCCCccH
Q 001782 851 VGDFGLARFLPPCSPATILETPSSSTGIKG-TVGYVAPEYGMGG-DMSATGDVYSFGILLLEMFTRRRPTDNMFNDGLTL 928 (1013)
Q Consensus 851 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DIwSlG~il~ell~G~~pf~~~~~~~~~~ 928 (1013)
++|||+|..+..-. .........+| ++.|+|||...+. -..+..|+||.|+++..+++|..||.........+
T Consensus 166 ~~df~~At~~~~~~-----g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~ 240 (601)
T KOG0590|consen 166 IADFGLATAYRNKN-----GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY 240 (601)
T ss_pred CCCchhhccccccC-----CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc
Confidence 99999998765411 11222445567 9999999998884 45678999999999999999999998754443322
Q ss_pred HHHHHhhCChhHHHhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccCCCCCCCCHHHHH
Q 001782 929 HEFAKMALPEKVMEIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSMESPSERIQMTDVV 998 (1013)
Q Consensus 929 ~~~~~~~~~~~~~~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 998 (1013)
..|..... .....+ .........++..+++..+|..|.+.+++.
T Consensus 241 ~~~~~~~~----------~~~~~~----------------~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 241 SSWKSNKG----------RFTQLP----------------WNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred eeeccccc----------ccccCc----------------cccCChhhhhcccccccCCchhcccccccc
Confidence 22221110 000000 111223456677788888888888887764
No 459
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.42 E-value=4.5e-15 Score=161.13 Aligned_cols=195 Identities=30% Similarity=0.474 Sum_probs=170.9
Q ss_pred ccccceeecccccccCCcccccCCCCCCCEEEccCCccCccCCccccccCccCEEEcCCCcccCCCCcccccCcccceee
Q 001782 390 LVNLNGFGLEYNQLTGPIPHAIGELRNLQVLDLHHNNLDGHIPESLGNLTILNSLDLGFNKLRGHVPSSLGNCQNLMLLS 469 (1013)
Q Consensus 390 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 469 (1013)
+..-...+|+.|++. .+|..+..+..|+.+.|..|.+. .+|..+.++..|+.|||+.|+++ .+|..++.|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 344556789999998 78999999999999999999998 89999999999999999999999 8999999886 99999
Q ss_pred cccccccccCCchhhcccchhhhhccCCCeecccCCccccCcCCCcEEEccCCCCCCCCccccccccccccccccccccc
Q 001782 470 VSNNKLTGALPPQILGIVTLSILLDLSGNLLTGSIPAEVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLT 549 (1013)
Q Consensus 470 L~~N~l~~~~p~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 549 (1013)
+++|+++ .+|+.+. ....|..||.+.|++. .+|..++++.+|+.|.+..|++. .+|+++..| .|..||+|.|+++
T Consensus 150 ~sNNkl~-~lp~~ig-~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIG-LLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS 224 (722)
T ss_pred EecCccc-cCCcccc-cchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee
Confidence 9999999 8999988 5888999999999999 68999999999999999999998 678888855 5999999999999
Q ss_pred cccCccccccCCCCeEecccccccccccccccc---ccccceeecCCcc
Q 001782 550 GSIPLALKTLKSIKELDLSRNNLSGQIPEFLEN---LSFLEYLNLSYNH 595 (1013)
Q Consensus 550 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~---l~~L~~L~l~~N~ 595 (1013)
.+|..|.+|+.|++|-|.+|.|. ..|..+.- ..=.++|+..-++
T Consensus 225 -~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 225 -YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred -ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 89999999999999999999998 56665542 3334667776664
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.36 E-value=5.8e-13 Score=152.72 Aligned_cols=199 Identities=37% Similarity=0.492 Sum_probs=160.4
Q ss_pred eeecccccccCCcccccCCCCCCCEEEccCCccCccCCccccccC-ccCEEEcCCCcccCCCCcccccCcccceeecccc
Q 001782 395 GFGLEYNQLTGPIPHAIGELRNLQVLDLHHNNLDGHIPESLGNLT-ILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVSNN 473 (1013)
Q Consensus 395 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 473 (1013)
.+.++.|.+.. ....+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 46667777642 2334555678999999999998 5676677774 8999999999998 67777889999999999999
Q ss_pred cccccCCchhhcccchhhhhccCCCeecccCCccccCcCCCcEEEccCCCCCCCCccccccccccccccccccccccccC
Q 001782 474 KLTGALPPQILGIVTLSILLDLSGNLLTGSIPAEVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIP 553 (1013)
Q Consensus 474 ~l~~~~p~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 553 (1013)
+++ .+|..... .+.|+.|++++|+++ .+|........|++|++++|++. .++..+..+.++..|.+.+|++. ..+
T Consensus 174 ~l~-~l~~~~~~-~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~ 248 (394)
T COG4886 174 DLS-DLPKLLSN-LSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLP 248 (394)
T ss_pred hhh-hhhhhhhh-hhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-ecc
Confidence 998 66665433 788888999999998 57776666677999999999755 57778889999999999999988 457
Q ss_pred ccccccCCCCeEeccccccccccccccccccccceeecCCccCCCCCCCC
Q 001782 554 LALKTLKSIKELDLSRNNLSGQIPEFLENLSFLEYLNLSYNHLEGEVPRR 603 (1013)
Q Consensus 554 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 603 (1013)
..++.+++|+.|++++|+++. ++. +..+.+++.|++++|.+...+|..
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred chhccccccceeccccccccc-ccc-ccccCccCEEeccCccccccchhh
Confidence 888889999999999999984 444 888999999999999998877754
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.36 E-value=9.4e-13 Score=150.99 Aligned_cols=103 Identities=33% Similarity=0.525 Sum_probs=50.0
Q ss_pred CCcceeeecccccCCCCCCcccccc-ccceeecccccccCCCcchhccCCccceeeccCCccCCCCCCCcCCCCCCCcEE
Q 001782 197 SNLQVLSIGENRLSGRLPDSLGQLR-SLYYLSISENAFSGMFPSSIFNISSLESISLLGNRLEGSLPVNIGFSLPNLENL 275 (1013)
Q Consensus 197 ~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L 275 (1013)
+.++.|++.+|.++ .+|.....++ +|+.|++++|++. .+|..+..+++|+.|++++|+++ .+|.... .+++|+.|
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~-~~~~L~~L 191 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLS-NLSNLNNL 191 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhh-hhhhhhhe
Confidence 44555555555555 4555454443 5555555555555 34444555555555555555555 4444332 24445555
Q ss_pred EeeeccccccCCCCCCCCCCCceEEcccC
Q 001782 276 SVRQNNYTGSLPHSLSNASNLRLLDFSLN 304 (1013)
Q Consensus 276 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 304 (1013)
++++|+++ .+|........|++|.+++|
T Consensus 192 ~ls~N~i~-~l~~~~~~~~~L~~l~~~~N 219 (394)
T COG4886 192 DLSGNKIS-DLPPEIELLSALEELDLSNN 219 (394)
T ss_pred eccCCccc-cCchhhhhhhhhhhhhhcCC
Confidence 55555544 33333323333444444444
No 462
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.31 E-value=6.2e-12 Score=143.64 Aligned_cols=142 Identities=19% Similarity=0.225 Sum_probs=100.4
Q ss_pred CCceeeccceEEEEEEECCCCeEEEEEEEeeccccc----------------------------------------hhHH
Q 001782 704 SNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGA----------------------------------------TKSF 743 (1013)
Q Consensus 704 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~ 743 (1013)
.+.||.|++|+||+|+.. +|+.||||+.++..... .-++
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 368999999999999986 68899999986432100 0024
Q ss_pred HHHHHHHhcCC----CCccceEEEEeecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHH-
Q 001782 744 VAECEALRNIR----HRNLIKIITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAF- 818 (1013)
Q Consensus 744 ~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~- 818 (1013)
.+|++.+.++. |..-+.+-.++. +.....++||||++|+++.++...... .. ...+++.+++.
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~----~~~~~~vLvmE~i~G~~L~~~~~~~~~-----~~---~~~~ia~~~~~~ 268 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYW----DRTSERVLTMEWIDGIPLSDIAALDEA-----GL---DRKALAENLARS 268 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEeh----hhcCCceEEEEeECCcccccHHHHHhc-----CC---CHHHHHHHHHHH
Confidence 55666555552 333333333332 222456899999999999987654211 12 23456666666
Q ss_pred HHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCC
Q 001782 819 AIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLP 861 (1013)
Q Consensus 819 ~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 861 (1013)
.+..+|.. |++|+|++|.||++++++.++++|||++..++
T Consensus 269 ~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 269 FLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 47888998 99999999999999999999999999997654
No 463
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=3.1e-12 Score=130.44 Aligned_cols=162 Identities=24% Similarity=0.412 Sum_probs=124.7
Q ss_pred HHhcCCCCccceEEEEeecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 001782 749 ALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCH 828 (1013)
Q Consensus 749 ~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~ 828 (1013)
-+-.+.|.|++++..|+.+...++.....+++|||..|++..++++.+.. ...+......+|+-||..||.|||+. .
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~--~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN--QKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh--hhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 34455699999999998887777788889999999999999999876442 25678888899999999999999995 6
Q ss_pred CCeeecCCCCCceEecCCCceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHH
Q 001782 829 PPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILL 908 (1013)
Q Consensus 829 ~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il 908 (1013)
|.|+|+++..+-|++..+|-+|+.--.-...... .............+-++|.|||+-.....+.++|||+||+..
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s----~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcA 272 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPS----VNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCA 272 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchh----hhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHH
Confidence 7899999999999999999999842211111000 000011112334467899999987777788899999999999
Q ss_pred HHHHhCCCC
Q 001782 909 LEMFTRRRP 917 (1013)
Q Consensus 909 ~ell~G~~p 917 (1013)
.||..+..-
T Consensus 273 lemailEiq 281 (458)
T KOG1266|consen 273 LEMAILEIQ 281 (458)
T ss_pred HHHHHheec
Confidence 999988764
No 464
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.29 E-value=3.4e-12 Score=142.49 Aligned_cols=203 Identities=25% Similarity=0.296 Sum_probs=159.1
Q ss_pred ccCCCCCceee--ccceEEEEEEE--CCCCeEEEEEEEeecc--ccchhHHHHHHHHHhcC-CCCccceEEEEeecCCcc
Q 001782 699 NDFSSSNMIGQ--GSFGFVYRGNL--GENEMAVAVKVMNLKQ--RGATKSFVAECEALRNI-RHRNLIKIITVCSSIDFE 771 (1013)
Q Consensus 699 ~~y~~~~~lg~--G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 771 (1013)
..+.+.+.+|. |.+|.||.+.. ..+...+|+|.-+..- .....+-.+|+...+++ .|++.++.+.. ++
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~-----~e 188 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA-----WE 188 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc-----cc
Confidence 35667788999 99999999998 8888899999854222 22233445677766666 48999885555 67
Q ss_pred ccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHH----HHHHHhhcCCCCeeecCCCCCceEecCC-
Q 001782 772 EVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAF----AIEYLHHHCHPPIVHGDLKPSNVLLDHD- 846 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~----~L~~LH~~~~~~ivH~Dlkp~NIll~~~- 846 (1013)
..+..++-+|++. .++.++..... ..++....+.+..+... |+.++|+. +++|-|+||.||+...+
T Consensus 189 ~~~~lfiqtE~~~-~sl~~~~~~~~-----~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~ 259 (524)
T KOG0601|consen 189 GSGILFIQTELCG-ESLQSYCHTPC-----NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDW 259 (524)
T ss_pred cCCcceeeecccc-chhHHhhhccc-----ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheeccccc
Confidence 7788999999998 78888877653 24777888899999999 99999999 99999999999999999
Q ss_pred CceEEccccccccCCCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCC
Q 001782 847 MVAHVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRPTD 919 (1013)
Q Consensus 847 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~pf~ 919 (1013)
...+++|||+...+........ ........|...|++||.. .+.++...|||++|.++.+..+|..+..
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~---~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~ 328 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSV---FKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPS 328 (524)
T ss_pred ceeecCCcceeEEccCCccccc---eeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhccccc
Confidence 8999999999987765443222 1112333677889999984 4678899999999999999999877654
No 465
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.26 E-value=1.1e-11 Score=142.74 Aligned_cols=151 Identities=19% Similarity=0.199 Sum_probs=98.7
Q ss_pred hccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecccc----------------------------------chh--
Q 001782 698 TNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG----------------------------------ATK-- 741 (1013)
Q Consensus 698 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------------------------------~~~-- 741 (1013)
..+|+. +.||.|++|+||+|+.+.+|+.||||+.++.... ..+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 446776 8999999999999999877999999999744110 001
Q ss_pred ----HHHHHHHHHhcCC----CCccceEEEEeecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHH
Q 001782 742 ----SFVAECEALRNIR----HRNLIKIITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLV 813 (1013)
Q Consensus 742 ----~~~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~ 813 (1013)
++.+|+..+.+++ +...+.+-.++ ++.....++||||++|+.+.++-.-.....+...+....+..++
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~----~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~ 273 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVY----WDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFF 273 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceee----cccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHH
Confidence 2444555554442 33334433333 12235678999999999998753221111001123333333344
Q ss_pred HHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC----ceEEccccccccCCCC
Q 001782 814 IDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM----VAHVGDFGLARFLPPC 863 (1013)
Q Consensus 814 ~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DFG~a~~~~~~ 863 (1013)
.|+ +.. |++|+|+||.||+++.++ .++++|||++..+++.
T Consensus 274 ~Qi-------f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 274 TQV-------FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred HHH-------HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 443 456 999999999999999888 9999999999877543
No 466
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.23 E-value=1.6e-10 Score=130.15 Aligned_cols=173 Identities=18% Similarity=0.254 Sum_probs=131.2
Q ss_pred EE-EEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeeccCCCHHHHhh
Q 001782 715 VY-RGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYMECGSLEDWLH 793 (1013)
Q Consensus 715 V~-~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 793 (1013)
+| .|..+.++.+|.|++.+...........+-++.++.++||+|+++++. ++..+..|+|+|.+. .|..+++
T Consensus 27 ~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t-----~e~~~~~ylvTErV~--Pl~~~lk 99 (690)
T KOG1243|consen 27 LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDT-----TEEEGTLYLVTERVR--PLETVLK 99 (690)
T ss_pred cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhh-----hcccCceEEEeeccc--cHHHHHH
Confidence 45 466677888999998875555444557788889999999999999997 456678999999985 6777776
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCCCCCccccCCC
Q 001782 794 QSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILETPS 873 (1013)
Q Consensus 794 ~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 873 (1013)
+. ....+...+.||+.||.|||+.+ +++|++|.-+.|+|++.|..||++|.++........
T Consensus 100 ~l---------~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-------- 160 (690)
T KOG1243|consen 100 EL---------GKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-------- 160 (690)
T ss_pred Hh---------HHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--------
Confidence 54 35577788999999999999775 999999999999999999999999998764332111
Q ss_pred CCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCC
Q 001782 874 SSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRR 915 (1013)
Q Consensus 874 ~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~ 915 (1013)
......--..|..|+.+.... -..|.|.|||++||++.|.
T Consensus 161 ~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 161 PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence 011112223456666433222 3569999999999999993
No 467
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.22 E-value=1.5e-10 Score=115.59 Aligned_cols=137 Identities=18% Similarity=0.186 Sum_probs=100.5
Q ss_pred CCceeeccceEEEEEEECC------CCeEEEEEEEeecc------------c----------cchhHH----HHHHHHHh
Q 001782 704 SNMIGQGSFGFVYRGNLGE------NEMAVAVKVMNLKQ------------R----------GATKSF----VAECEALR 751 (1013)
Q Consensus 704 ~~~lg~G~~g~V~~~~~~~------~~~~vavK~~~~~~------------~----------~~~~~~----~~E~~~l~ 751 (1013)
...||.|--+.||.|.... .+..+|||+.+... + ...+.+ .+|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4579999999999998753 35789999986321 0 001123 38999999
Q ss_pred cCC--CCccceEEEEeecCCccccceEEEEEeeccCCCHHH-HhhccccccccCCCCHHHHHHHHHHHHHHHHHH-hhcC
Q 001782 752 NIR--HRNLIKIITVCSSIDFEEVDFKAIVYEYMECGSLED-WLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYL-HHHC 827 (1013)
Q Consensus 752 ~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~L-H~~~ 827 (1013)
++. .-++..++++ ...++||||+.+..+.. .++. ..++..+...+..+++.++..+ |+.
T Consensus 82 rl~~~Gv~vP~pi~~---------~~~~lvME~Ig~~~~~~~~Lkd-------~~~~~~~~~~i~~~i~~~l~~l~H~~- 144 (197)
T cd05146 82 RMQKAGIPCPEVVVL---------KKHVLVMSFIGDDQVPAPKLKD-------AKLNDEEMKNAYYQVLSMMKQLYKEC- 144 (197)
T ss_pred HHHHcCCCCCeEEEe---------cCCEEEEEEcCCCCccchhhhc-------cccCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 984 3567777765 45689999998654321 2221 1344556778889999999999 888
Q ss_pred CCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 828 HPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 828 ~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
|+||||+++.||+++ ++.+.++|||.+...
T Consensus 145 --glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 145 --NLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred --CeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 999999999999997 467999999988643
No 468
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.18 E-value=7.2e-10 Score=117.24 Aligned_cols=281 Identities=14% Similarity=0.090 Sum_probs=173.3
Q ss_pred CCCCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcC-CCCccceEEEEeec--CCccccceEEE
Q 001782 702 SSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNI-RHRNLIKIITVCSS--IDFEEVDFKAI 778 (1013)
Q Consensus 702 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~--~~~~~~~~~~l 778 (1013)
...+.||+|+.+.+|-.-.-.+ .+.|+++........ +.+..|... .||-+-.-+.+-.. ..........+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~d---~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVRD---QVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecchhhc---hhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 3567899999999997644322 467888744332222 222333333 56644331221100 00122233667
Q ss_pred EEeeccCCC-HHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEcccccc
Q 001782 779 VYEYMECGS-LEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLA 857 (1013)
Q Consensus 779 v~e~~~~gs-L~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 857 (1013)
.|+.+.+.- ...+.........-....|...++.++.+|.+.+.||++ |.+-||+.++|+||++++.+.+.|=..-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccce
Confidence 888877542 223322211111113578999999999999999999999 9999999999999999999999875432
Q ss_pred ccCCCCCCCccccCCCCCcccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhC-CCCCCCcCCCCccHHHH
Q 001782 858 RFLPPCSPATILETPSSSTGIKGTVGYVAPEYGM-----GGDMSATGDVYSFGILLLEMFTR-RRPTDNMFNDGLTLHEF 931 (1013)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DIwSlG~il~ell~G-~~pf~~~~~~~~~~~~~ 931 (1013)
. +..........+|...|.+||... +..-+...|.|.+|+++++++.| ++||........
T Consensus 165 q---------i~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~----- 230 (637)
T COG4248 165 Q---------INANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISD----- 230 (637)
T ss_pred e---------eccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCC-----
Confidence 2 222333355677899999999754 33456789999999999999986 999987532211
Q ss_pred HHhhCChhHH-HhhhhhhccchhhhhccCCCCchhHHHHHHHHHHHHHHhhhcccC--CCCCCCCHHHHHHHHHHhhhhh
Q 001782 932 AKMALPEKVM-EIVDPLLLLDLEARASNCGSHRTEIAKIEECLVAIVRIGVLCSME--SPSERIQMTDVVAKLCSARKIF 1008 (1013)
Q Consensus 932 ~~~~~~~~~~-~~i~~~l~~~~~~R~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~--dP~~RPs~~evl~~L~~~~~~~ 1008 (1013)
-+...+ ++.......-++.|+..... +.....+-.+..+..+..+|+.. .|.-|||++..+..|.++.+++
T Consensus 231 ----ap~p~E~~Ia~g~f~ya~~~~~g~~p~--P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L 304 (637)
T COG4248 231 ----APNPLETDIAHGRFAYASDQRRGLKPP--PRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQL 304 (637)
T ss_pred ----CCCcchhhhhcceeeechhccCCCCCC--CCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhh
Confidence 111112 22222222222222211110 01111233455677778888865 3568999999999999999888
Q ss_pred hcc
Q 001782 1009 LSN 1011 (1013)
Q Consensus 1009 ~~~ 1011 (1013)
.+|
T Consensus 305 ~~C 307 (637)
T COG4248 305 KKC 307 (637)
T ss_pred hhh
Confidence 766
No 469
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.16 E-value=5.4e-12 Score=126.71 Aligned_cols=179 Identities=27% Similarity=0.263 Sum_probs=125.4
Q ss_pred CCCCEEEccCCccCccCCccccccCccCEEEcCCC-cccCCCCcccccCcccceeecccccccccCCchhhcccchhhhh
Q 001782 415 RNLQVLDLHHNNLDGHIPESLGNLTILNSLDLGFN-KLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSILL 493 (1013)
Q Consensus 415 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L 493 (1013)
+.|+++...+..++. .| .+-..+.+..+.-+.- -.+|..-..+...+.|+++|||+|.|+ .+..+.. ..+.++.|
T Consensus 237 ptl~t~~v~~s~~~~-~~-~l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvK-L~Pkir~L 312 (490)
T KOG1259|consen 237 PTLQTICVHNTTIQD-VP-SLLPETILADPSGSEPSTSNGSALVSADTWQELTELDLSGNLIT-QIDESVK-LAPKLRRL 312 (490)
T ss_pred chhheeeeecccccc-cc-cccchhhhcCccCCCCCccCCceEEecchHhhhhhccccccchh-hhhhhhh-hccceeEE
Confidence 567777776665542 11 1222222222221111 112333333344467889999999988 5655543 37888889
Q ss_pred ccCCCeecccCCccccCcCCCcEEEccCCCCCCCCccccccccccccccccccccccccCccccccCCCCeEeccccccc
Q 001782 494 DLSGNLLTGSIPAEVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRNNLS 573 (1013)
Q Consensus 494 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 573 (1013)
++|+|.++. + +.+..+++|+.||||+|.++ .+-.+-..+.+.+.|.|+.|.|.. -+.++.+-+|..||+++|+|.
T Consensus 313 ~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 313 ILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred eccccceee-e-hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhHhh--hhhhHhhhhheeccccccchh
Confidence 999999883 2 34888899999999999998 566666778899999999999873 356788889999999999998
Q ss_pred ccc-ccccccccccceeecCCccCCCCCCC
Q 001782 574 GQI-PEFLENLSFLEYLNLSYNHLEGEVPR 602 (1013)
Q Consensus 574 ~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~ 602 (1013)
... -..++++|-|+++.|.+|++.+.+.-
T Consensus 388 ~ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 388 ELDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred hHHHhcccccccHHHHHhhcCCCccccchH
Confidence 432 25688999999999999999987653
No 470
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.15 E-value=1.5e-10 Score=115.76 Aligned_cols=130 Identities=18% Similarity=0.154 Sum_probs=95.4
Q ss_pred CCceeeccceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCcc-ceEEEEeecCCccccceEEEEEee
Q 001782 704 SNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNL-IKIITVCSSIDFEEVDFKAIVYEY 782 (1013)
Q Consensus 704 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 782 (1013)
.+.++.|.++.||+++.. +..|++|+...... ....+.+|+++++.+.+.++ .+++.+.. ...++||||
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~-------~~~~lv~e~ 72 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP-------ETGVLITEF 72 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC-------CCCeEEEEe
Confidence 367899999999999875 67899998764432 22356789999998865443 45554421 234799999
Q ss_pred ccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC--CCCeeecCCCCCceEecCCCceEEccccccc
Q 001782 783 MECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHC--HPPIVHGDLKPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 783 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 858 (1013)
++|.++.+. . .....++.+++++++.||+.. +.+++|||++|.||+++ ++.++++|||.+.
T Consensus 73 i~G~~l~~~-~-------------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 73 IEGSELLTE-D-------------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cCCCccccc-c-------------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 998877543 0 011345678999999999982 12359999999999999 6689999999876
No 471
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.15 E-value=8.2e-12 Score=132.35 Aligned_cols=208 Identities=22% Similarity=0.209 Sum_probs=124.8
Q ss_pred hcccccceeecccccccCCcc--cccCCCCCCCEEEccCCccCcc--CCccccccCccCEEEcCCCcccCCCCcc-cccC
Q 001782 388 KNLVNLNGFGLEYNQLTGPIP--HAIGELRNLQVLDLHHNNLDGH--IPESLGNLTILNSLDLGFNKLRGHVPSS-LGNC 462 (1013)
Q Consensus 388 ~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l 462 (1013)
+++.+|+.+.|.+..+. ..+ .....+++++.|||++|-+... +..-...+++|+.|+|+.|++.-...+. -..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 35667778888877776 223 3556678888888888877632 2223446788888888888876322221 1245
Q ss_pred cccceeecccccccccCCchhhcccchhhhhccCCCeecccCCccccCcCCCcEEEccCCCCCCCCc-cccccccccccc
Q 001782 463 QNLMLLSVSNNKLTGALPPQILGIVTLSILLDLSGNLLTGSIPAEVGNLKNLVQLGLSENRFSNEIP-VSLSACTTLEYL 541 (1013)
Q Consensus 463 ~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L 541 (1013)
++|+.|.|++|.|+..--..+....+.+..|+|+.|...++-......+..|+.|||++|++....- ...+.++.|+.|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 6788888888888744334444456777777887775333333444556677777777777763221 345667777777
Q ss_pred cccccccccc-cCcc-----ccccCCCCeEeccccccccccc--cccccccccceeecCCccCC
Q 001782 542 YMEGNSLTGS-IPLA-----LKTLKSIKELDLSRNNLSGQIP--EFLENLSFLEYLNLSYNHLE 597 (1013)
Q Consensus 542 ~L~~N~l~~~-~p~~-----~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~ 597 (1013)
+++.+.+... .|+. ...+++|+.|+++.|++.. .+ ..+..+++|+.|.+..|.|+
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~-w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRD-WRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCcccc-ccccchhhccchhhhhhccccccc
Confidence 7777776642 2222 3445666666666666642 21 12333444455555555544
No 472
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=6e-12 Score=133.35 Aligned_cols=209 Identities=22% Similarity=0.220 Sum_probs=110.4
Q ss_pred CcccceEEeccCCccccCCC--CccccCCCCceeccccccccCCCC-CccccccccccceecccccccccCCCC-ccCCC
Q 001782 122 RLFRLETLILANNSFSGKIP--SNLSRCSNLINFHARGNNLVGQIP-PDIGYSWLKLEFLSLRDNLLAGQLAPS-IGNIS 197 (1013)
Q Consensus 122 ~l~~L~~L~L~~n~l~~~~p--~~l~~l~~L~~L~l~~n~l~~~ip-~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~ 197 (1013)
++++|+...|.+.... ..+ .....|++++.|||+.|-+..--| ..+..++++|+.|+|+.|.+.-..... -..++
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 3444444444444433 112 133344444444444444332111 112234445555555555443211111 12456
Q ss_pred CcceeeecccccCCC-CCCccccccccceeecccccccCCCcchhccCCccceeeccCCccCCCCCC--CcCCCCCCCcE
Q 001782 198 NLQVLSIGENRLSGR-LPDSLGQLRSLYYLSISENAFSGMFPSSIFNISSLESISLLGNRLEGSLPV--NIGFSLPNLEN 274 (1013)
Q Consensus 198 ~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~~l~~L~~ 274 (1013)
+|+.|.|+.|.++.. +...+...++|+.|+|..|..-+.-......+..|++|||++|.+. ..+. -.+ .++.|..
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~-~l~~L~~ 275 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVG-TLPGLNQ 275 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccc-cccchhh
Confidence 677777777777621 2222344667777777777433233444455667777777777765 4442 222 4677777
Q ss_pred EEeeecccccc-CCCC-----CCCCCCCceEEcccCcccccc-cccccCCCCccccccccCcCCCC
Q 001782 275 LSVRQNNYTGS-LPHS-----LSNASNLRLLDFSLNHFSGQV-KIDFNRLPNLFRLSFSKNNLGTG 333 (1013)
Q Consensus 275 L~L~~N~l~~~-~~~~-----~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~ 333 (1013)
|+++.|.++.. .|+. ....++|++|+++.|++.... -..+..+++|+.|.+..|.+...
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNKE 341 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccccc
Confidence 77777776643 2332 345677888888888875322 22355677778888778877653
No 473
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.05 E-value=5e-11 Score=136.73 Aligned_cols=107 Identities=38% Similarity=0.428 Sum_probs=47.8
Q ss_pred CCCCCEEEccCCccCccCC-ccccccCccCEEEcCCCcccCCCCcccccCcccceeecccccccccCCchhhcccchhhh
Q 001782 414 LRNLQVLDLHHNNLDGHIP-ESLGNLTILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSIL 492 (1013)
Q Consensus 414 l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~ 492 (1013)
+..|+.+++++|+++...+ . ...+.+++.+++++|.+.. ...+..+..+..+++..|+++-.-+..... ...|+.
T Consensus 161 l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~~~~~l~~~~-~~~L~~ 236 (414)
T KOG0531|consen 161 LKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKISKLEGLNELV-MLHLRE 236 (414)
T ss_pred chhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccceeccCcccch-hHHHHH
Confidence 4455555555555553222 1 3445555556666665542 233334444444455555555211111000 002445
Q ss_pred hccCCCeecccCCccccCcCCCcEEEccCCCCC
Q 001782 493 LDLSGNLLTGSIPAEVGNLKNLVQLGLSENRFS 525 (1013)
Q Consensus 493 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 525 (1013)
+++++|.+. .++..+..+.++..|++++|++.
T Consensus 237 l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 237 LYLSGNRIS-RSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred HhcccCccc-cccccccccccccccchhhcccc
Confidence 555555554 22234444455555555555544
No 474
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.04 E-value=1e-10 Score=114.25 Aligned_cols=129 Identities=28% Similarity=0.349 Sum_probs=37.6
Q ss_pred ccCCCCCCCeeeeccCCccccCCcccC-CcccceEEeccCCccccCCCCccccCCCCceeccccccccCCCCCccccccc
Q 001782 95 YVGNLSFLRFINFANNGFSGEIPGEIG-RLFRLETLILANNSFSGKIPSNLSRCSNLINFHARGNNLVGQIPPDIGYSWL 173 (1013)
Q Consensus 95 ~l~~l~~L~~L~l~~n~l~~~ip~~~~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~l~ 173 (1013)
.+.+...+++|+|++|.|+ .|. .++ .+.+|+.|||++|.++ .++ .+..+++|++|++++|+++ .++..+.
T Consensus 14 ~~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~---- 84 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLD---- 84 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHH----
T ss_pred ccccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchH----
Confidence 3455566777888888777 443 455 4677788888888777 343 4666667777777766666 3332221
Q ss_pred cccceecccccccccCCCCccCCCCcceeeecccccCCC-CCCccccccccceeecccccccCCC---cchhccCCccce
Q 001782 174 KLEFLSLRDNLLAGQLAPSIGNISNLQVLSIGENRLSGR-LPDSLGQLRSLYYLSISENAFSGMF---PSSIFNISSLES 249 (1013)
Q Consensus 174 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~Ls~n~l~~~~---p~~~~~l~~L~~ 249 (1013)
..+++|++|++++|+|... .-..+..+++|+.|+|.+|.++... ...+..+++|+.
T Consensus 85 --------------------~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~ 144 (175)
T PF14580_consen 85 --------------------KNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKV 144 (175)
T ss_dssp --------------------HH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SE
T ss_pred --------------------HhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhhe
Confidence 2345555555555555421 1133455666666666666665321 123556777776
Q ss_pred eec
Q 001782 250 ISL 252 (1013)
Q Consensus 250 L~L 252 (1013)
||-
T Consensus 145 LD~ 147 (175)
T PF14580_consen 145 LDG 147 (175)
T ss_dssp ETT
T ss_pred eCC
Confidence 663
No 475
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.01 E-value=1.3e-10 Score=129.99 Aligned_cols=198 Identities=22% Similarity=0.213 Sum_probs=146.5
Q ss_pred hhhhccCCCCCceeeccceEEEEEEEC-CCCeEEEEEEEeeccccchhH--HHHHHHHHhcC-CCCccceEEEEeecCCc
Q 001782 695 SKATNDFSSSNMIGQGSFGFVYRGNLG-ENEMAVAVKVMNLKQRGATKS--FVAECEALRNI-RHRNLIKIITVCSSIDF 770 (1013)
Q Consensus 695 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 770 (1013)
.....+|..+..||.|.|+.|+....+ .++..|++|...........+ -..|+.+...+ .|.++++++.. |
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-----W 335 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSS-----W 335 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCC-----c
Confidence 345678899999999999999998765 678889998775333322222 24566666655 47777776655 3
Q ss_pred cccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCC-Cce
Q 001782 771 EEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHD-MVA 849 (1013)
Q Consensus 771 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~ 849 (1013)
...+..++=-||+++++....+... ..+++..++++..|++.++.++|+. .++|+|+||+||++..+ +..
T Consensus 336 ~~~r~~~ip~e~~~~~s~~l~~~~~------~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~ 406 (524)
T KOG0601|consen 336 SQLRQGYIPLEFCEGGSSSLRSVTS------QMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFS 406 (524)
T ss_pred cccccccCchhhhcCcchhhhhHHH------HhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhh
Confidence 3445666889999999887766332 3577888999999999999999999 99999999999999886 788
Q ss_pred EEccccccccCCCCCCCccccCCCCCcccccccccc--cccccCCCCCCcccchHHHHHHHHHHHhCCCC
Q 001782 850 HVGDFGLARFLPPCSPATILETPSSSTGIKGTVGYV--APEYGMGGDMSATGDVYSFGILLLEMFTRRRP 917 (1013)
Q Consensus 850 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DIwSlG~il~ell~G~~p 917 (1013)
++.|||.+..+.-. ........+++ +|+......+..++|+||||..+.|..+|...
T Consensus 407 ~~~~~~~~t~~~~~-----------~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l 465 (524)
T KOG0601|consen 407 KLGDFGCWTRLAFS-----------SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL 465 (524)
T ss_pred hcccccccccccee-----------cccccccccccccchhhccccccccccccccccccccccccCccc
Confidence 99999998632111 11112233344 55555667788899999999999999998754
No 476
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.01 E-value=5.8e-12 Score=130.12 Aligned_cols=141 Identities=21% Similarity=0.302 Sum_probs=75.5
Q ss_pred CCCceEEcccCcccccc----cccccCCCCccccccccCcCCCCCCCChhhhhhcccccccccccccccccCCccchhhh
Q 001782 294 SNLRLLDFSLNHFSGQV----KIDFNRLPNLFRLSFSKNNLGTGAIGDLDFIAHLTNCSKLEALGLDTNIFGGVLPLSIA 369 (1013)
Q Consensus 294 ~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~ 369 (1013)
++|+++...+|++.... ...|...+.|+.+.++.|.|....+ ......+..|+.|+.|++..|.|+......
T Consensus 157 ~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~--~al~eal~~~~~LevLdl~DNtft~egs~~-- 232 (382)
T KOG1909|consen 157 PKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGV--TALAEALEHCPHLEVLDLRDNTFTLEGSVA-- 232 (382)
T ss_pred cceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchh--HHHHHHHHhCCcceeeecccchhhhHHHHH--
Confidence 45555666666554322 2335555667777777776654333 234455566666666666666665332211
Q ss_pred cchhhHHHHhccchhHHhhcccccceeecccccccCCcccccCCCCCCCEEEccCCccCccCCcccc-----ccCccCEE
Q 001782 370 NLSSTIILFSMGLNQIYVKNLVNLNGFGLEYNQLTGPIPHAIGELRNLQVLDLHHNNLDGHIPESLG-----NLTILNSL 444 (1013)
Q Consensus 370 ~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L 444 (1013)
+...+..+++|+.|++++|.++......|. ..+.|++|
T Consensus 233 -------------------------------------LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl 275 (382)
T KOG1909|consen 233 -------------------------------------LAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVL 275 (382)
T ss_pred -------------------------------------HHHHhcccchheeecccccccccccHHHHHHHHhccCCCCcee
Confidence 122334445555555555555533222221 24566777
Q ss_pred EcCCCcccC----CCCcccccCcccceeecccccc
Q 001782 445 DLGFNKLRG----HVPSSLGNCQNLMLLSVSNNKL 475 (1013)
Q Consensus 445 ~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l 475 (1013)
.|.+|.|+. .+...+...+.|..|+|++|++
T Consensus 276 ~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 276 ELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 777776662 1223344466777777777777
No 477
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.00 E-value=2.2e-11 Score=125.88 Aligned_cols=116 Identities=20% Similarity=0.232 Sum_probs=70.5
Q ss_pred cccccccccccccccCCccchhhhcchhhHHHHhccchhHHhhcccccceeecccccccC----CcccccCCCCCCCEEE
Q 001782 346 NCSKLEALGLDTNIFGGVLPLSIANLSSTIILFSMGLNQIYVKNLVNLNGFGLEYNQLTG----PIPHAIGELRNLQVLD 421 (1013)
Q Consensus 346 ~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~ 421 (1013)
+-++|+.+...+|++.......+ ...|+..+.|+.+.+++|.|.. .+...|..+++|+.||
T Consensus 155 ~~~~Lrv~i~~rNrlen~ga~~~---------------A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLd 219 (382)
T KOG1909|consen 155 SKPKLRVFICGRNRLENGGATAL---------------AEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLD 219 (382)
T ss_pred CCcceEEEEeeccccccccHHHH---------------HHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeee
Confidence 34566666666666653322211 1235556677777777777652 2234567778888888
Q ss_pred ccCCccCc----cCCccccccCccCEEEcCCCcccCCCCcccc-----cCcccceeeccccccc
Q 001782 422 LHHNNLDG----HIPESLGNLTILNSLDLGFNKLRGHVPSSLG-----NCQNLMLLSVSNNKLT 476 (1013)
Q Consensus 422 L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~ 476 (1013)
|.+|-++. .+...+..+++|+.|++++|.+...-..+|. ..++|++|.|.+|.++
T Consensus 220 l~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 220 LRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred cccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhH
Confidence 88887763 2344566677788888888877643322221 2456777777777766
No 478
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.98 E-value=3.2e-10 Score=110.90 Aligned_cols=107 Identities=27% Similarity=0.315 Sum_probs=24.3
Q ss_pred CCCCCEEEccCCccCccCCcccc-ccCccCEEEcCCCcccCCCCcccccCcccceeecccccccccCCchhhcccchhhh
Q 001782 414 LRNLQVLDLHHNNLDGHIPESLG-NLTILNSLDLGFNKLRGHVPSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSIL 492 (1013)
Q Consensus 414 l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~ 492 (1013)
...++.|+|++|+|+. + +.++ .+.+|+.|+|++|.|+. ++ .+..++.|+.|++++|+|+ .+++.+...++.|+.
T Consensus 18 ~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 18 PVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQE 92 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--E
T ss_pred cccccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCE
Confidence 3356666666666662 2 2344 35666666666666663 22 3555666666666666666 333222222333444
Q ss_pred hccCCCeecccC-CccccCcCCCcEEEccCCCCC
Q 001782 493 LDLSGNLLTGSI-PAEVGNLKNLVQLGLSENRFS 525 (1013)
Q Consensus 493 L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~ 525 (1013)
|+|++|+|...- -..+..+++|+.|+|.+|.++
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 444444433210 122334444455555554443
No 479
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.98 E-value=9.6e-11 Score=117.86 Aligned_cols=134 Identities=23% Similarity=0.274 Sum_probs=87.5
Q ss_pred CccCCCCcceeeecccccCCCCCCccccccccceeecccccccCCCcchhccCCccceeeccCCccCCCCCCCcCCCCCC
Q 001782 192 SIGNISNLQVLSIGENRLSGRLPDSLGQLRSLYYLSISENAFSGMFPSSIFNISSLESISLLGNRLEGSLPVNIGFSLPN 271 (1013)
Q Consensus 192 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~ 271 (1013)
.+-....|++||||+|.|+ .+.++..-++.++.|++|+|.|.. + ..+..+++|+.||||+|.++ .+. ++...+-+
T Consensus 279 ~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~-Gwh~KLGN 353 (490)
T KOG1259|consen 279 SADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECV-GWHLKLGN 353 (490)
T ss_pred ecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-e-hhhhhcccceEeecccchhH-hhh-hhHhhhcC
Confidence 3334456777777777776 566666667777777777777762 2 23677777777777777776 332 22224667
Q ss_pred CcEEEeeeccccccCCCCCCCCCCCceEEcccCcccccc-cccccCCCCccccccccCcCCC
Q 001782 272 LENLSVRQNNYTGSLPHSLSNASNLRLLDFSLNHFSGQV-KIDFNRLPNLFRLSFSKNNLGT 332 (1013)
Q Consensus 272 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~ 332 (1013)
.+.|.|+.|.|.. -..+..+-+|..||+++|+|.... -..++++|.|+.|.|.+|++..
T Consensus 354 IKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 354 IKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred EeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 7777777777652 234566667778888888776432 2346777777777777777654
No 480
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.97 E-value=1e-10 Score=134.13 Aligned_cols=251 Identities=25% Similarity=0.305 Sum_probs=178.9
Q ss_pred CCCCCCCeeeeccCCccccCCcccCCcccceEEeccCCccccCCCCccccCCCCceeccccccccCCCCCcccccccccc
Q 001782 97 GNLSFLRFINFANNGFSGEIPGEIGRLFRLETLILANNSFSGKIPSNLSRCSNLINFHARGNNLVGQIPPDIGYSWLKLE 176 (1013)
Q Consensus 97 ~~l~~L~~L~l~~n~l~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~ 176 (1013)
..+..++.+++..|.++ .+-..++.+++|+.|++.+|+|. .+...+..+++|++|++++|.|+..-+-. .++.|+
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~~l~---~l~~L~ 143 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLEGLS---TLTLLK 143 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheeccccccccccchh---hccchh
Confidence 45677777888888888 44456788899999999999998 56655888999999999999988443332 455688
Q ss_pred ceecccccccccCCCCccCCCCcceeeecccccCCCCCCc-cccccccceeecccccccCCCcchhccCCccceeeccCC
Q 001782 177 FLSLRDNLLAGQLAPSIGNISNLQVLSIGENRLSGRLPDS-LGQLRSLYYLSISENAFSGMFPSSIFNISSLESISLLGN 255 (1013)
Q Consensus 177 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N 255 (1013)
.|++++|.|+.. ..+..+.+|+.+++++|++.. +... ...+.+|+.+++++|.+. ....+..+..+..+++..|
T Consensus 144 ~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~-ie~~~~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~l~~n 218 (414)
T KOG0531|consen 144 ELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVD-IENDELSELISLEELDLGGNSIR--EIEGLDLLKKLVLLSLLDN 218 (414)
T ss_pred hheeccCcchhc--cCCccchhhhcccCCcchhhh-hhhhhhhhccchHHHhccCCchh--cccchHHHHHHHHhhcccc
Confidence 999999988754 456668899999999999984 4332 577889999999999887 3444555666777788899
Q ss_pred ccCCCCCCCcCCCCCC--CcEEEeeeccccccCCCCCCCCCCCceEEcccCcccccccccccCCCCccccccccCcCCCC
Q 001782 256 RLEGSLPVNIGFSLPN--LENLSVRQNNYTGSLPHSLSNASNLRLLDFSLNHFSGQVKIDFNRLPNLFRLSFSKNNLGTG 333 (1013)
Q Consensus 256 ~l~~~~p~~~~~~l~~--L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 333 (1013)
+++ .+- .+. .+.. |+.+++++|.+. ..+..+..+.++..|++.+|++.... .+...+.+..+...+|.+...
T Consensus 219 ~i~-~~~-~l~-~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 292 (414)
T KOG0531|consen 219 KIS-KLE-GLN-ELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLALS 292 (414)
T ss_pred cce-ecc-Ccc-cchhHHHHHHhcccCccc-cccccccccccccccchhhccccccc--cccccchHHHhccCcchhcch
Confidence 887 222 111 2333 889999999988 44466778889999999999887543 355667777788888876632
Q ss_pred CCCChhhhhhcccccccccccccccccCCccc
Q 001782 334 AIGDLDFIAHLTNCSKLEALGLDTNIFGGVLP 365 (1013)
Q Consensus 334 ~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p 365 (1013)
... ...........++...+..|......+
T Consensus 293 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 293 EAI--SQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred hhh--hccccccccccccccccccCccccccc
Confidence 111 011114455677777777776665443
No 481
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.95 E-value=5.9e-09 Score=98.83 Aligned_cols=140 Identities=26% Similarity=0.311 Sum_probs=101.2
Q ss_pred CCCceeeccceEEEEEEECCCCeEEEEEEEeeccc--------cchhHHHHHHHHHhcCCCCcc--ceEEEEeecCCccc
Q 001782 703 SSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR--------GATKSFVAECEALRNIRHRNL--IKIITVCSSIDFEE 772 (1013)
Q Consensus 703 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~~~~~~ 772 (1013)
....+-+|+-+.|+++.+. |+.++||.-..+.. -..++-.+|++.+.++.--.| .+++.+ +
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~-------D 81 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFI-------D 81 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEE-------e
Confidence 5678999999999999985 66677775432221 123567889999988753222 233322 2
Q ss_pred cceEEEEEeeccC-CCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCC---c
Q 001782 773 VDFKAIVYEYMEC-GSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM---V 848 (1013)
Q Consensus 773 ~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~ 848 (1013)
...-.++|||++| .++.+++..... ..........++.+|-+.+.-||.. +|+|||+..+||++..++ .
T Consensus 82 ~~~~~i~ME~~~g~~~vk~~i~~~~~----~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~ 154 (229)
T KOG3087|consen 82 TYGGQIYMEFIDGASTVKDFILSTME----DESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQIT 154 (229)
T ss_pred cCCCeEEEEeccchhHHHHHHHHHcc----CcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCc
Confidence 2445799999995 388898877533 1222233368899999999999999 999999999999997665 4
Q ss_pred eEEccccccc
Q 001782 849 AHVGDFGLAR 858 (1013)
Q Consensus 849 ~kl~DFG~a~ 858 (1013)
+.++|||++.
T Consensus 155 ~~lIdfgls~ 164 (229)
T KOG3087|consen 155 PILIDFGLSS 164 (229)
T ss_pred eEEEeecchh
Confidence 5899999985
No 482
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.95 E-value=4.1e-10 Score=82.51 Aligned_cols=39 Identities=59% Similarity=1.053 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhcC-CCCCCCCCCCCC--CCCceeEEEEeC
Q 001782 34 ETDRLALLAIKSQLQ-DPLGVTSSWNNS--MNLCQWTGVTCG 72 (1013)
Q Consensus 34 ~~~~~aLl~~k~~~~-~~~~~~~sw~~~--~~~c~w~gv~C~ 72 (1013)
++|++||++||+++. ||.+.+++|+.+ .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 579999999999997 678899999876 799999999995
No 483
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.94 E-value=6.5e-09 Score=99.43 Aligned_cols=128 Identities=30% Similarity=0.375 Sum_probs=95.2
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecccc--------chhHHHHHHHHHhcCCC--CccceEEEEeecCCccccc
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG--------ATKSFVAECEALRNIRH--RNLIKIITVCSSIDFEEVD 774 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~ 774 (1013)
..+++|+-+.+|.+.+. +.++++|.-..+... ..++-.+|+.++.+++- -++..++++ ++.
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv-------D~~ 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV-------DPD 72 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE-------cCC
Confidence 46889999999999774 444667654332211 12345789999988853 344455554 335
Q ss_pred eEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccc
Q 001782 775 FKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDF 854 (1013)
Q Consensus 775 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 854 (1013)
...++|||++|..|.+++... ...++..+-.-+.-||.. ||||||+.++||++..+. +.++||
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~-------------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDf 135 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEA-------------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDF 135 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhc-------------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEEC
Confidence 667999999999999898764 134566777778889999 999999999999997765 899999
Q ss_pred cccc
Q 001782 855 GLAR 858 (1013)
Q Consensus 855 G~a~ 858 (1013)
|++.
T Consensus 136 GLg~ 139 (204)
T COG3642 136 GLGE 139 (204)
T ss_pred Cccc
Confidence 9986
No 484
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.93 E-value=8.3e-09 Score=108.22 Aligned_cols=145 Identities=21% Similarity=0.267 Sum_probs=108.0
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeeccc-cchhHHHHHHHHHhcCCC--CccceEEEEeecCCccccceEEEEEe
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR-GATKSFVAECEALRNIRH--RNLIKIITVCSSIDFEEVDFKAIVYE 781 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~e 781 (1013)
+.++.|.++.||+++..+ ++.+++|+...... .....+..|+++++.+.+ ..+.+++.+..... ..+..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEE
Confidence 578999999999998853 57899998764332 134578899999999975 44677777743221 1235689999
Q ss_pred eccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------
Q 001782 782 YMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHC---------------------------------- 827 (1013)
Q Consensus 782 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~---------------------------------- 827 (1013)
|++|.++.+.+.. ..++..+...++.++++++.+||+..
T Consensus 81 ~i~G~~l~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (223)
T cd05154 81 RVDGRVLRDRLLR-------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE 153 (223)
T ss_pred EeCCEecCCCCCC-------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence 9998888775532 13566677788888888888888521
Q ss_pred -------------------CCCeeecCCCCCceEecC--CCceEEcccccccc
Q 001782 828 -------------------HPPIVHGDLKPSNVLLDH--DMVAHVGDFGLARF 859 (1013)
Q Consensus 828 -------------------~~~ivH~Dlkp~NIll~~--~~~~kl~DFG~a~~ 859 (1013)
...++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 66789999998763
No 485
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.88 E-value=5.7e-10 Score=130.86 Aligned_cols=249 Identities=20% Similarity=0.251 Sum_probs=165.6
Q ss_pred hhhccCCCCCceeeccceEEEEEEECCCCeEEEEEEEeecc---ccchhHHHHHHHHHhcCCCCccceEEEEeecCCccc
Q 001782 696 KATNDFSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQ---RGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEE 772 (1013)
Q Consensus 696 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 772 (1013)
...+.+.+.+-+.+|.++.++.++-...+...++|+..... ....+....+-.+.-...+|-++...-- +..
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-----~~~ 875 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-----FPC 875 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-----CCC
Confidence 34567788889999999999999887777555555543111 1111222222222222234444433221 345
Q ss_pred cceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEc
Q 001782 773 VDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVG 852 (1013)
Q Consensus 773 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 852 (1013)
....+++++|..+++|...++.. +..+.+-.......+..+.+|||.. .+.|+|++|.|.+...++..+++
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~------~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~ 946 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNS------GCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLT 946 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcC------CCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccC
Confidence 57788999999999999988876 3445555566667788999999998 89999999999999999999999
Q ss_pred cccccccCCCC---CCC------------------ccccC--CCCCcccccccccccccccCCCCCCcccchHHHHHHHH
Q 001782 853 DFGLARFLPPC---SPA------------------TILET--PSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLL 909 (1013)
Q Consensus 853 DFG~a~~~~~~---~~~------------------~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ 909 (1013)
|||.....+-. ... ..... ........||+.|.+||...+......+|.|+.|++++
T Consensus 947 ~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~ 1026 (1205)
T KOG0606|consen 947 DFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLF 1026 (1205)
T ss_pred ccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhh
Confidence 99844332111 000 00001 12245667999999999999999999999999999999
Q ss_pred HHHhCCCCCCCcCCCCccHHHHHHhh---------CChhHHHhhhhhhccchhhhhccC
Q 001782 910 EMFTRRRPTDNMFNDGLTLHEFAKMA---------LPEKVMEIVDPLLLLDLEARASNC 959 (1013)
Q Consensus 910 ell~G~~pf~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~~l~~~~~~R~~~~ 959 (1013)
|.++|..||....... .+....... .++.+++.+.+.+..++.+|....
T Consensus 1027 e~l~g~pp~na~tpq~-~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1027 EVLTGIPPFNAETPQQ-IFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhcCCCCCCCcchhh-hhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 9999999997643221 112111111 233456666666667776666544
No 486
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.87 E-value=3e-08 Score=108.18 Aligned_cols=178 Identities=16% Similarity=0.155 Sum_probs=134.4
Q ss_pred cceEEEEEEECCCCeEEEEEEEeeccccchhHHHHHHHHHhcCCCCccceEEEEeecCCccccceEEEEEeeccC-CCHH
Q 001782 711 SFGFVYRGNLGENEMAVAVKVMNLKQRGATKSFVAECEALRNIRHRNLIKIITVCSSIDFEEVDFKAIVYEYMEC-GSLE 789 (1013)
Q Consensus 711 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-gsL~ 789 (1013)
-..+.|++....+|..|++|+++..+......-..-+++++++.|+|||++.+++....+ .+...++|++|.++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF-~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTF-GDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhcc-CcceEEEEEecCCCCchHH
Confidence 346889999999999999999965544333334556889999999999999999775433 44678999999984 5676
Q ss_pred HHhhccccc---------cccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccC
Q 001782 790 DWLHQSNDQ---------LEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFL 860 (1013)
Q Consensus 790 ~~l~~~~~~---------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 860 (1013)
++--..... ......++...|.++.|+..||.++|+. |..-+-+.+.+|+++.+.+++|+.-|+...+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 654332211 1234578899999999999999999999 9999999999999999999999888876654
Q ss_pred CCCCCCccccCCCCCcccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCC
Q 001782 861 PPCSPATILETPSSSTGIKGTVGYVAPEYGMGGDMSATGDVYSFGILLLEMFTRRRP 917 (1013)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwSlG~il~ell~G~~p 917 (1013)
.++.. |-+. --.+-|.=.||.++..+.||..-
T Consensus 444 ~~d~~----------------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDPT----------------------EPLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCCC----------------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 32210 0011 11257899999999999999654
No 487
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.86 E-value=1.8e-08 Score=100.40 Aligned_cols=124 Identities=25% Similarity=0.240 Sum_probs=82.6
Q ss_pred EEEEEEECCCCeEEEEEEEeeccc-------------c-------------chhHHHHHHHHHhcCCCC--ccceEEEEe
Q 001782 714 FVYRGNLGENEMAVAVKVMNLKQR-------------G-------------ATKSFVAECEALRNIRHR--NLIKIITVC 765 (1013)
Q Consensus 714 ~V~~~~~~~~~~~vavK~~~~~~~-------------~-------------~~~~~~~E~~~l~~l~h~--niv~~~~~~ 765 (1013)
.||.|... ++..+|+|+.+.... . ......+|++.|.++..- ++.+++++
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~- 78 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY- 78 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE-
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE-
Confidence 48999885 677999999863210 0 012367899999999754 57777776
Q ss_pred ecCCccccceEEEEEeecc--CCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHH-HhhcCCCCeeecCCCCCceE
Q 001782 766 SSIDFEEVDFKAIVYEYME--CGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEY-LHHHCHPPIVHGDLKPSNVL 842 (1013)
Q Consensus 766 ~~~~~~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~-LH~~~~~~ivH~Dlkp~NIl 842 (1013)
...++||||++ |..+..+.... ++..+...++.+++..+.. +|.. |++|||+.+.||+
T Consensus 79 --------~~~~ivME~I~~~G~~~~~l~~~~--------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIl 139 (188)
T PF01163_consen 79 --------NRNVIVMEYIGEDGVPLPRLKDVD--------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNIL 139 (188)
T ss_dssp --------ETTEEEEE--EETTEEGGCHHHCG--------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEE
T ss_pred --------eCCEEEEEecCCCccchhhHHhcc--------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEE
Confidence 34579999999 65665544332 1123456677888886655 5688 9999999999999
Q ss_pred ecCCCceEEcccccccc
Q 001782 843 LDHDMVAHVGDFGLARF 859 (1013)
Q Consensus 843 l~~~~~~kl~DFG~a~~ 859 (1013)
++++ .+.|+|||.+..
T Consensus 140 v~~~-~~~iIDf~qav~ 155 (188)
T PF01163_consen 140 VDDG-KVYIIDFGQAVD 155 (188)
T ss_dssp EETT-CEEE--GTTEEE
T ss_pred eecc-eEEEEecCccee
Confidence 9888 999999998763
No 488
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.78 E-value=1.3e-07 Score=100.39 Aligned_cols=145 Identities=17% Similarity=0.066 Sum_probs=100.4
Q ss_pred CceeeccceEEEEEEECCCCeEEEEEEEeecccc-----------chhHHHHHHHHHhcCC--CCccceEEEEeecCCcc
Q 001782 705 NMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQRG-----------ATKSFVAECEALRNIR--HRNLIKIITVCSSIDFE 771 (1013)
Q Consensus 705 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~ 771 (1013)
+.+-+.....|+++.. .|+.|.||........ ....+.+|...+.++. .-.++..+++.......
T Consensus 28 e~v~~~~~rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 28 EVFRELEGRRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred cEEecCCCceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 4444444455777766 4678999977432211 1124778999888874 22334445553222111
Q ss_pred ccceEEEEEeeccCC-CHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecC-----
Q 001782 772 EVDFKAIVYEYMECG-SLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDH----- 845 (1013)
Q Consensus 772 ~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~----- 845 (1013)
.....++|||++++. +|.+++..... ...+...+..++.+++..+.-||.. ||+|+|++++|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~~----~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~ 178 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWAT----NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGR 178 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCC
Confidence 134578999999975 89999864211 2456677889999999999999999 9999999999999975
Q ss_pred --CCceEEccccccc
Q 001782 846 --DMVAHVGDFGLAR 858 (1013)
Q Consensus 846 --~~~~kl~DFG~a~ 858 (1013)
++.+.++||+.++
T Consensus 179 ~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 179 EEDLKLSVIDLHRAQ 193 (268)
T ss_pred CCCceEEEEECCccc
Confidence 4689999999875
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.77 E-value=3.6e-09 Score=84.98 Aligned_cols=60 Identities=42% Similarity=0.574 Sum_probs=34.4
Q ss_pred ccccccccccccccccCccccccCCCCeEeccccccccccccccccccccceeecCCccC
Q 001782 537 TLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRNNLSGQIPEFLENLSFLEYLNLSYNHL 596 (1013)
Q Consensus 537 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 596 (1013)
+|++|++++|+|+...+..|..+++|++|++++|+|+...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455555555555544445555566666666666666555555556666666666666553
No 490
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.77 E-value=5.3e-09 Score=127.78 Aligned_cols=126 Identities=26% Similarity=0.415 Sum_probs=58.0
Q ss_pred CCCCeeeeccCCccccCCcccCCcccceEEeccCCc--cccCCC-CccccCCCCceeccccccccCCCCCcccccccccc
Q 001782 100 SFLRFINFANNGFSGEIPGEIGRLFRLETLILANNS--FSGKIP-SNLSRCSNLINFHARGNNLVGQIPPDIGYSWLKLE 176 (1013)
Q Consensus 100 ~~L~~L~l~~n~l~~~ip~~~~~l~~L~~L~L~~n~--l~~~~p-~~l~~l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~ 176 (1013)
...+...+.+|.+. .++.+...- +|++|-+..|. +. .++ +.|..++.|+.|||++|.--+.+|..++ .+.+|+
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~~~-~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~-~Li~Lr 598 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSENP-KLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIG-ELVHLR 598 (889)
T ss_pred hheeEEEEeccchh-hccCCCCCC-ccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHh-hhhhhh
Confidence 44555555555554 333333222 45555555554 22 222 2244455555555555444444444443 344444
Q ss_pred ceecccccccccCCCCccCCCCcceeeecccccCCCCCCccccccccceeeccc
Q 001782 177 FLSLRDNLLAGQLAPSIGNISNLQVLSIGENRLSGRLPDSLGQLRSLYYLSISE 230 (1013)
Q Consensus 177 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 230 (1013)
+|+|+...++ .+|..+++|..|.+|++..+.-...+|.....|++|++|.+-.
T Consensus 599 yL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~ 651 (889)
T KOG4658|consen 599 YLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPR 651 (889)
T ss_pred cccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeec
Confidence 4444444444 4444555555555555554443333444444455555555443
No 491
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.77 E-value=2.5e-10 Score=127.76 Aligned_cols=202 Identities=31% Similarity=0.314 Sum_probs=135.1
Q ss_pred hcccccceeecccccccCCc-ccccCCCCCCCEEEccCCccCccCCcccccc-CccCEEEcCCCccc----------CCC
Q 001782 388 KNLVNLNGFGLEYNQLTGPI-PHAIGELRNLQVLDLHHNNLDGHIPESLGNL-TILNSLDLGFNKLR----------GHV 455 (1013)
Q Consensus 388 ~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~----------~~~ 455 (1013)
.-+++++.+.+-.-.=.+.. |-.+..+.+|++|.|.++.|.. ..++..+ ..|++|.- .|.++ |.+
T Consensus 81 d~lqkt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~ 157 (1096)
T KOG1859|consen 81 DFLQKTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLIC-HNSLDALRHVFASCGGDI 157 (1096)
T ss_pred HHHhhheeeeecccCCCCCCCCceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhh-hccHHHHHHHHHHhcccc
Confidence 33455555555443333333 5567788899999999998873 2222222 24444422 23332 122
Q ss_pred CcccccCcccceeecccccccccCCchhhcccchhhhhccCCCeecccCCccccCcCCCcEEEccCCCCCCCCcc-cccc
Q 001782 456 PSSLGNCQNLMLLSVSNNKLTGALPPQILGIVTLSILLDLSGNLLTGSIPAEVGNLKNLVQLGLSENRFSNEIPV-SLSA 534 (1013)
Q Consensus 456 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~ 534 (1013)
..++. ...|...+.++|.++ .+...+ ..++.++.|||++|+++.. +.+..+++|++|||+.|++. .+|. ...+
T Consensus 158 ~ns~~-Wn~L~~a~fsyN~L~-~mD~SL-qll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~g 231 (1096)
T KOG1859|consen 158 SNSPV-WNKLATASFSYNRLV-LMDESL-QLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVG 231 (1096)
T ss_pred ccchh-hhhHhhhhcchhhHH-hHHHHH-HHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhh
Confidence 22221 136888899999988 555444 3478888999999999853 37788899999999999998 4443 3444
Q ss_pred ccccccccccccccccccCccccccCCCCeEeccccccccccc-cccccccccceeecCCccCCCCCC
Q 001782 535 CTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRNNLSGQIP-EFLENLSFLEYLNLSYNHLEGEVP 601 (1013)
Q Consensus 535 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p 601 (1013)
+. |..|.+++|.++.. ..+.+|.+|+.|||++|-|++.-- ..++.|..|+.|+|.+|++.+.+-
T Consensus 232 c~-L~~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p~ 296 (1096)
T KOG1859|consen 232 CK-LQLLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAPW 296 (1096)
T ss_pred hh-heeeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCHH
Confidence 54 99999999988743 357888999999999998876322 235677888999999999987543
No 492
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.75 E-value=5.5e-10 Score=125.08 Aligned_cols=179 Identities=26% Similarity=0.281 Sum_probs=128.3
Q ss_pred CccccccCccCEEEcCCCcccCCCCcccccC-cccceeeccccccc----------ccCCchhhcccchhhhhccCCCee
Q 001782 432 PESLGNLTILNSLDLGFNKLRGHVPSSLGNC-QNLMLLSVSNNKLT----------GALPPQILGIVTLSILLDLSGNLL 500 (1013)
Q Consensus 432 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~----------~~~p~~~~~~~~~l~~L~Ls~N~l 500 (1013)
|-.+..+..|++|.|.++.|.. ...+..+ .+|+.|. -+|.++ |.+..++ ....|...+.++|.+
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LI-C~~Sl~Al~~v~ascggd~~ns~--~Wn~L~~a~fsyN~L 176 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLI-CHNSLDALRHVFASCGGDISNSP--VWNKLATASFSYNRL 176 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhh-hhccHHHHHHHHHHhccccccch--hhhhHhhhhcchhhH
Confidence 5567778899999999999873 2222222 2455543 223332 1221111 134566778899999
Q ss_pred cccCCccccCcCCCcEEEccCCCCCCCCccccccccccccccccccccccccCc-cccccCCCCeEeccccccccccccc
Q 001782 501 TGSIPAEVGNLKNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPL-ALKTLKSIKELDLSRNNLSGQIPEF 579 (1013)
Q Consensus 501 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~ 579 (1013)
+ .+...+.-++.|+.|||++|+++... .+..|++|++|||++|.|. .+|. .-..+. |+.|.+++|.++.. ..
T Consensus 177 ~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~tL--~g 249 (1096)
T KOG1859|consen 177 V-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALTTL--RG 249 (1096)
T ss_pred H-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHHhh--hh
Confidence 8 67778888899999999999998543 7888999999999999998 4443 334444 99999999999842 35
Q ss_pred cccccccceeecCCccCCCCC--CCCCccCCCcceeeeCCcCCCC
Q 001782 580 LENLSFLEYLNLSYNHLEGEV--PRRGVFSNKTRFYFTGNKRLCG 622 (1013)
Q Consensus 580 ~~~l~~L~~L~l~~N~l~~~~--p~~~~~~~~~~~~~~~N~~~c~ 622 (1013)
+.+|.+|+.||+++|-|.+.- ...+.+..+..+++.|||..|.
T Consensus 250 ie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 250 IENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred HHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 788999999999999988643 2346677888899999998775
No 493
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.74 E-value=5.2e-09 Score=84.02 Aligned_cols=61 Identities=41% Similarity=0.505 Sum_probs=47.7
Q ss_pred CCCcEEEccCCCCCCCCccccccccccccccccccccccccCccccccCCCCeEecccccc
Q 001782 512 KNLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRNNL 572 (1013)
Q Consensus 512 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 572 (1013)
++|++|++++|+|+...+..|.++++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4677888888888765556778888888888888888877777888888888888888875
No 494
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.73 E-value=8.6e-09 Score=126.00 Aligned_cols=105 Identities=26% Similarity=0.321 Sum_probs=55.1
Q ss_pred Ccceeeecccc--cCCCCCCccccccccceeecccccccCCCcchhccCCccceeeccCCccCCCCCCCcCCCCCCCcEE
Q 001782 198 NLQVLSIGENR--LSGRLPDSLGQLRSLYYLSISENAFSGMFPSSIFNISSLESISLLGNRLEGSLPVNIGFSLPNLENL 275 (1013)
Q Consensus 198 ~L~~L~L~~n~--l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L 275 (1013)
.|+.|-+..|. +....++.|..++.|+.|||++|.=-+.+|..+++|-+|++|+|++..++ .+|.++. .+..|.+|
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~-~Lk~L~~L 623 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLG-NLKKLIYL 623 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHH-HHHhhhee
Confidence 45555555554 33222233455555555555555444455555555555555555555555 5555554 45555555
Q ss_pred EeeeccccccCCCCCCCCCCCceEEcccC
Q 001782 276 SVRQNNYTGSLPHSLSNASNLRLLDFSLN 304 (1013)
Q Consensus 276 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 304 (1013)
++..+.-...+|.....+++|++|.+-.-
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred ccccccccccccchhhhcccccEEEeecc
Confidence 55555443344444445555655555443
No 495
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.73 E-value=4.8e-08 Score=99.22 Aligned_cols=134 Identities=26% Similarity=0.208 Sum_probs=98.4
Q ss_pred CCCCCceeeccceEEEEEEECCCCeEEEEEEEeeccc----------------------cchhHHHHHHHHHhcCCCC--
Q 001782 701 FSSSNMIGQGSFGFVYRGNLGENEMAVAVKVMNLKQR----------------------GATKSFVAECEALRNIRHR-- 756 (1013)
Q Consensus 701 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~h~-- 756 (1013)
+.+..+||.|--|.||.|.+. .+.++|||.-+.... .......+|.++|+++.-.
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 456789999999999999997 677899997542110 0123468899999999644
Q ss_pred ccceEEEEeecCCccccceEEEEEeeccCCCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCC
Q 001782 757 NLIKIITVCSSIDFEEVDFKAIVYEYMECGSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDL 836 (1013)
Q Consensus 757 niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dl 836 (1013)
.|.+.+++ +..++||||++|--|...- ++.+..-.++..|+.-+..+-.. ||||||+
T Consensus 172 ~VP~P~~~---------nRHaVvMe~ieG~eL~~~r-----------~~~en~~~il~~il~~~~~~~~~---GiVHGDl 228 (304)
T COG0478 172 KVPKPIAW---------NRHAVVMEYIEGVELYRLR-----------LDVENPDEILDKILEEVRKAYRR---GIVHGDL 228 (304)
T ss_pred CCCCcccc---------ccceeeeehcccceeeccc-----------CcccCHHHHHHHHHHHHHHHHHc---CccccCC
Confidence 77887776 6678999999975554432 12223344555555555555566 9999999
Q ss_pred CCCceEecCCCceEEccccccc
Q 001782 837 KPSNVLLDHDMVAHVGDFGLAR 858 (1013)
Q Consensus 837 kp~NIll~~~~~~kl~DFG~a~ 858 (1013)
.+-||+++++|.+.++||--+.
T Consensus 229 SefNIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 229 SEFNILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred chheEEEecCCCEEEEeCcccc
Confidence 9999999999999999996543
No 496
>PRK09902 hypothetical protein; Provisional
Probab=98.51 E-value=1.7e-06 Score=86.51 Aligned_cols=142 Identities=18% Similarity=0.146 Sum_probs=104.3
Q ss_pred eeeccceEEEEEEECCCCeEEEEEEEeecc------ccchhHHHHHHHHHhcCC--CCccceEEEEeecCCccccceEEE
Q 001782 707 IGQGSFGFVYRGNLGENEMAVAVKVMNLKQ------RGATKSFVAECEALRNIR--HRNLIKIITVCSSIDFEEVDFKAI 778 (1013)
Q Consensus 707 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~l 778 (1013)
-|+||-+.|+.....+ ..+-+|.-...- ......|.+|...++++. .-.+.+++ ++...........++
T Consensus 26 ~~rgG~SgV~r~~~~g--~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L 102 (216)
T PRK09902 26 YRRNGMSGVQCVERNG--KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL 102 (216)
T ss_pred cCCCCcceEEEEEeCC--cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence 3668999999988753 357788764111 234578999999999984 22355555 332221223455789
Q ss_pred EEeeccC-CCHHHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCc--eEEcccc
Q 001782 779 VYEYMEC-GSLEDWLHQSNDQLEVGNFNVIQRLNLVIDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMV--AHVGDFG 855 (1013)
Q Consensus 779 v~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DFG 855 (1013)
|+|-+++ .+|.+++..... .+.+..++..+..+++..++-||+. |+.|+|+.+.||+++.++. ++++||.
T Consensus 103 VTe~L~g~~~L~~~l~~~~~----~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlE 175 (216)
T PRK09902 103 VTEDMAGFISIADWYAQHAV----SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLE 175 (216)
T ss_pred EEEeCCCCccHHHHHhcCCc----CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhh
Confidence 9997764 588888865422 3567788889999999999999999 9999999999999986666 9999998
Q ss_pred ccc
Q 001782 856 LAR 858 (1013)
Q Consensus 856 ~a~ 858 (1013)
-++
T Consensus 176 k~r 178 (216)
T PRK09902 176 KSR 178 (216)
T ss_pred ccc
Confidence 765
No 497
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.51 E-value=9.5e-09 Score=92.07 Aligned_cols=87 Identities=25% Similarity=0.308 Sum_probs=50.6
Q ss_pred CCcEEEccCCCCCCCCccccccccccccccccccccccccCccccccCCCCeEeccccccccccccccccccccceeecC
Q 001782 513 NLVQLGLSENRFSNEIPVSLSACTTLEYLYMEGNSLTGSIPLALKTLKSIKELDLSRNNLSGQIPEFLENLSFLEYLNLS 592 (1013)
Q Consensus 513 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 592 (1013)
.++.|+|++|.|+ .+|.++..++.|+.|+++.|.|. ..|..+..|.+|..||..+|.+. .+|..+-.-+.....++.
T Consensus 78 t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lg 154 (177)
T KOG4579|consen 78 TATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLG 154 (177)
T ss_pred hhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhc
Confidence 4555556666665 55555666666666666666665 55566666666666666666665 344333322333444556
Q ss_pred CccCCCCCCC
Q 001782 593 YNHLEGEVPR 602 (1013)
Q Consensus 593 ~N~l~~~~p~ 602 (1013)
++++.+..+.
T Consensus 155 nepl~~~~~~ 164 (177)
T KOG4579|consen 155 NEPLGDETKK 164 (177)
T ss_pred CCcccccCcc
Confidence 7777766664
No 498
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.50 E-value=7.9e-09 Score=92.59 Aligned_cols=104 Identities=25% Similarity=0.375 Sum_probs=66.7
Q ss_pred hhhccCCCeecccCCcc---ccCcCCCcEEEccCCCCCCCCccccc-cccccccccccccccccccCccccccCCCCeEe
Q 001782 491 ILLDLSGNLLTGSIPAE---VGNLKNLVQLGLSENRFSNEIPVSLS-ACTTLEYLYMEGNSLTGSIPLALKTLKSIKELD 566 (1013)
Q Consensus 491 ~~L~Ls~N~l~~~~~~~---~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 566 (1013)
..+||+++++- .+++. +.....|+..+|++|.|+ ..|+.|. ..+.++.|+|++|+|+ .+|..+..++.|+.|+
T Consensus 30 h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 30 HFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 34455555543 23332 233445666677777777 4454443 3456777777777777 6677777777777777
Q ss_pred ccccccccccccccccccccceeecCCccCCC
Q 001782 567 LSRNNLSGQIPEFLENLSFLEYLNLSYNHLEG 598 (1013)
Q Consensus 567 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 598 (1013)
++.|.|. ..|+.+..|.+|-.|+..+|.+..
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~e 137 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARAE 137 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCcccc
Confidence 7777777 566666667777777777776653
No 499
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.48 E-value=1.6e-06 Score=89.18 Aligned_cols=110 Identities=26% Similarity=0.259 Sum_probs=85.3
Q ss_pred hhHHHHHHHHHhcCC--CCccceEEEEeecCCccccceEEEEEeeccCC-CHHHHhhccccccccCCCCHHHHHHHHHHH
Q 001782 740 TKSFVAECEALRNIR--HRNLIKIITVCSSIDFEEVDFKAIVYEYMECG-SLEDWLHQSNDQLEVGNFNVIQRLNLVIDV 816 (1013)
Q Consensus 740 ~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~qi 816 (1013)
..+..+|...+.++. .=.+.+.+++........ ...++|+|++++. +|.+++.... ..+......++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~-~~s~lite~l~~~~~L~~~~~~~~------~~~~~~~~~ll~~l 127 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGG-YRSYLITEALPGAQDLRDLLQQWE------QLDPSQRRELLRAL 127 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCc-eeEEEEEEeCCCcccHHHHHHhhc------ccchhhHHHHHHHH
Confidence 356788888888774 334566666654432222 4568999999974 7999988642 25566778899999
Q ss_pred HHHHHHHhhcCCCCeeecCCCCCceEecCCC---ceEEcccccccc
Q 001782 817 AFAIEYLHHHCHPPIVHGDLKPSNVLLDHDM---VAHVGDFGLARF 859 (1013)
Q Consensus 817 a~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DFG~a~~ 859 (1013)
+..++-||+. ||+|+|+++.|||++.+. .+.++||+-++.
T Consensus 128 ~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 128 ARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999999999 999999999999999887 899999997763
No 500
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.44 E-value=6.4e-08 Score=109.98 Aligned_cols=140 Identities=21% Similarity=0.338 Sum_probs=95.1
Q ss_pred HHHHHHHHHHhhcCCCCeeecCCCCCceEecCCCceEEccccccccCCCCCCCcccc-CCCCCcccccccccccccccCC
Q 001782 814 IDVAFAIEYLHHHCHPPIVHGDLKPSNVLLDHDMVAHVGDFGLARFLPPCSPATILE-TPSSSTGIKGTVGYVAPEYGMG 892 (1013)
Q Consensus 814 ~qia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~ 892 (1013)
.+++.|+.|+|.. +++||+.|.|++|.++..+..||+.|+++.-..+........ ......-..-...|.|||++.+
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3455899999998 499999999999999999999999999886554422211111 1111122234578999999999
Q ss_pred CCCCcccchHHHHHHHHHHHh-CCCCCCCcCCCCccHH----------HHHHhhCChhHHHhhhhhhccchhhhh
Q 001782 893 GDMSATGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLH----------EFAKMALPEKVMEIVDPLLLLDLEARA 956 (1013)
Q Consensus 893 ~~~~~~~DIwSlG~il~ell~-G~~pf~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~~~~~R~ 956 (1013)
...+.++|+||+|+++|.+.. |+.-+... ....... ......+|++..+-+.+++..+...||
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~-~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp 257 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAAN-GGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRP 257 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhcc-CCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCc
Confidence 888999999999999999995 54444331 1111000 001123566667777777777776666
Done!