Query 001783
Match_columns 1013
No_of_seqs 478 out of 3282
Neff 4.9
Searched_HMMs 46136
Date Fri Mar 29 09:13:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001783.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001783hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0606 Microtubule-associated 100.0 7.6E-69 1.6E-73 639.2 21.6 923 19-990 242-1189(1205)
2 KOG0605 NDR and related serine 100.0 1.3E-67 2.9E-72 597.4 29.0 389 584-1000 136-545 (550)
3 KOG0598 Ribosomal protein S6 k 100.0 4.6E-64 1E-68 550.4 25.5 300 586-918 22-324 (357)
4 KOG0616 cAMP-dependent protein 100.0 4.9E-60 1.1E-64 506.2 22.4 288 586-910 41-333 (355)
5 KOG0694 Serine/threonine prote 100.0 9.4E-59 2E-63 536.6 24.4 295 584-913 363-662 (694)
6 KOG0986 G protein-coupled rece 100.0 9.6E-58 2.1E-62 507.7 15.9 337 587-971 183-539 (591)
7 KOG0592 3-phosphoinositide-dep 100.0 2.3E-56 5E-61 505.8 21.5 285 586-894 70-355 (604)
8 KOG0610 Putative serine/threon 100.0 2.4E-56 5.1E-61 494.0 21.1 317 585-902 73-417 (459)
9 KOG0612 Rho-associated, coiled 100.0 4.2E-56 9E-61 531.8 15.7 294 585-910 71-371 (1317)
10 KOG0690 Serine/threonine prote 100.0 5.4E-56 1.2E-60 477.9 14.3 302 581-916 160-465 (516)
11 KOG0615 Serine/threonine prote 100.0 2.7E-54 6E-59 477.0 19.0 263 588-885 171-445 (475)
12 KOG0608 Warts/lats-like serine 100.0 1.3E-53 2.8E-58 485.7 23.7 319 589-910 629-961 (1034)
13 KOG0575 Polo-like serine/threo 100.0 2.3E-53 5E-58 487.5 24.6 256 589-881 18-273 (592)
14 cd05599 STKc_NDR_like Catalyti 100.0 3.1E-50 6.7E-55 443.5 33.0 319 589-909 1-328 (364)
15 KOG0581 Mitogen-activated prot 100.0 4.8E-51 1E-55 448.2 23.2 259 585-883 75-341 (364)
16 cd05629 STKc_NDR_like_fungal C 100.0 7E-50 1.5E-54 444.5 32.4 320 589-910 1-338 (377)
17 cd05628 STKc_NDR1 Catalytic do 100.0 1.6E-49 3.5E-54 440.1 34.6 319 589-909 1-325 (363)
18 cd05625 STKc_LATS1 Catalytic d 100.0 1E-49 2.2E-54 444.0 32.7 317 590-910 2-339 (382)
19 cd05612 STKc_PRKX_like Catalyt 100.0 5E-50 1.1E-54 429.6 25.6 284 589-909 1-288 (291)
20 PTZ00263 protein kinase A cata 100.0 1.5E-49 3.3E-54 434.7 29.9 289 584-909 13-305 (329)
21 cd05571 STKc_PKB Catalytic dom 100.0 1.2E-49 2.7E-54 433.8 28.8 284 595-912 1-288 (323)
22 cd05626 STKc_LATS2 Catalytic d 100.0 4.2E-49 9.1E-54 440.0 33.3 317 590-910 2-339 (381)
23 cd05585 STKc_YPK1_like Catalyt 100.0 4.2E-49 9E-54 427.1 30.1 283 597-913 1-285 (312)
24 cd05627 STKc_NDR2 Catalytic do 100.0 4.6E-49 1E-53 435.4 29.7 319 589-909 1-325 (360)
25 KOG0696 Serine/threonine prote 100.0 6.9E-51 1.5E-55 447.7 14.6 301 583-917 343-648 (683)
26 cd05598 STKc_LATS Catalytic do 100.0 8.5E-49 1.9E-53 435.1 30.8 321 589-910 1-335 (376)
27 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.1E-48 2.3E-53 427.0 29.6 284 589-909 1-289 (333)
28 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.1E-48 2.3E-53 427.1 29.2 315 589-910 1-318 (350)
29 PTZ00426 cAMP-dependent protei 100.0 1.7E-48 3.6E-53 430.8 30.0 289 584-909 25-318 (340)
30 KOG0595 Serine/threonine-prote 100.0 5.9E-49 1.3E-53 435.2 23.3 261 586-882 7-273 (429)
31 cd05631 STKc_GRK4 Catalytic do 100.0 2.6E-48 5.7E-53 414.5 27.5 278 590-899 1-285 (285)
32 cd05593 STKc_PKB_gamma Catalyt 100.0 4.9E-48 1.1E-52 423.2 30.1 286 595-914 1-290 (328)
33 cd05595 STKc_PKB_beta Catalyti 100.0 8.4E-48 1.8E-52 420.0 29.3 284 595-912 1-288 (323)
34 cd05587 STKc_cPKC Catalytic do 100.0 1.4E-47 3E-52 417.3 30.9 287 590-910 1-292 (324)
35 cd05590 STKc_nPKC_eta Catalyti 100.0 4.1E-48 8.8E-53 422.0 26.6 282 595-910 1-288 (320)
36 cd05589 STKc_PKN Catalytic dom 100.0 1.5E-47 3.3E-52 417.0 30.0 286 591-911 1-293 (324)
37 KOG0583 Serine/threonine prote 100.0 3.8E-48 8.3E-53 436.5 26.0 260 586-882 14-280 (370)
38 cd05591 STKc_nPKC_epsilon Cata 100.0 1.5E-47 3.2E-52 416.6 28.4 282 595-910 1-289 (321)
39 cd05624 STKc_MRCK_beta Catalyt 100.0 4.9E-47 1.1E-51 415.3 32.3 290 589-909 1-298 (331)
40 cd05616 STKc_cPKC_beta Catalyt 100.0 2.4E-47 5.3E-52 415.2 29.6 284 590-908 1-289 (323)
41 cd05623 STKc_MRCK_alpha Cataly 100.0 8.7E-47 1.9E-51 412.9 33.3 289 589-908 1-297 (332)
42 cd05586 STKc_Sck1_like Catalyt 100.0 1.1E-47 2.5E-52 418.4 25.8 282 597-911 1-289 (330)
43 cd05594 STKc_PKB_alpha Catalyt 100.0 2E-47 4.3E-52 416.2 27.6 284 595-912 1-289 (325)
44 cd05597 STKc_DMPK_like Catalyt 100.0 8.5E-47 1.8E-51 413.4 32.4 290 589-909 1-298 (331)
45 cd05575 STKc_SGK Catalytic dom 100.0 3.4E-47 7.3E-52 414.1 28.6 284 595-912 1-288 (323)
46 cd05601 STKc_CRIK Catalytic do 100.0 3.9E-47 8.4E-52 413.6 28.6 287 589-910 1-296 (330)
47 cd05592 STKc_nPKC_theta_delta 100.0 4.8E-47 1E-51 412.8 28.4 282 595-912 1-285 (316)
48 KOG0614 cGMP-dependent protein 100.0 1.6E-49 3.5E-54 445.5 9.1 292 586-910 417-712 (732)
49 cd05596 STKc_ROCK Catalytic do 100.0 8.2E-47 1.8E-51 421.4 30.7 289 586-909 40-338 (370)
50 cd05588 STKc_aPKC Catalytic do 100.0 6.1E-47 1.3E-51 414.2 28.2 283 595-911 1-298 (329)
51 cd05620 STKc_nPKC_delta Cataly 100.0 8.9E-47 1.9E-51 410.8 28.9 279 595-910 1-283 (316)
52 cd05604 STKc_SGK3 Catalytic do 100.0 8E-47 1.7E-51 411.5 27.7 283 595-911 1-287 (325)
53 cd05619 STKc_nPKC_theta Cataly 100.0 8.8E-47 1.9E-51 411.3 27.9 281 595-912 1-285 (316)
54 cd05615 STKc_cPKC_alpha Cataly 100.0 2.2E-46 4.7E-51 408.9 30.9 276 590-899 1-281 (323)
55 cd05622 STKc_ROCK1 Catalytic d 100.0 1.5E-46 3.2E-51 419.9 30.1 292 585-909 39-338 (371)
56 cd05614 STKc_MSK2_N N-terminal 100.0 1.7E-46 3.7E-51 408.9 29.0 287 590-909 1-301 (332)
57 cd05584 STKc_p70S6K Catalytic 100.0 2E-46 4.3E-51 408.6 29.4 284 594-911 1-292 (323)
58 cd05621 STKc_ROCK2 Catalytic d 100.0 2.5E-46 5.4E-51 418.4 30.8 289 588-909 42-338 (370)
59 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.1E-46 4.6E-51 409.6 29.5 282 595-910 1-295 (327)
60 cd05570 STKc_PKC Catalytic dom 100.0 9.8E-47 2.1E-51 410.2 26.4 281 595-912 1-289 (318)
61 cd05603 STKc_SGK2 Catalytic do 100.0 3.1E-46 6.7E-51 405.7 30.1 281 595-909 1-285 (321)
62 KOG0588 Serine/threonine prote 100.0 2.1E-47 4.6E-52 439.7 21.5 260 587-884 10-270 (786)
63 cd05602 STKc_SGK1 Catalytic do 100.0 2.3E-46 5E-51 407.9 27.8 282 595-910 1-286 (325)
64 cd05618 STKc_aPKC_iota Catalyt 100.0 2.9E-46 6.3E-51 409.4 28.6 281 595-909 1-296 (329)
65 KOG0695 Serine/threonine prote 100.0 1.3E-47 2.9E-52 413.7 16.4 299 582-914 243-555 (593)
66 KOG0597 Serine-threonine prote 100.0 7.7E-48 1.7E-52 436.1 14.1 256 588-882 1-256 (808)
67 KOG0593 Predicted protein kina 100.0 1.2E-47 2.5E-52 411.9 14.6 260 588-883 1-290 (396)
68 cd05582 STKc_RSK_N N-terminal 100.0 3.8E-46 8.2E-51 404.5 25.7 281 595-910 2-289 (318)
69 cd05605 STKc_GRK4_like Catalyt 100.0 9.8E-46 2.1E-50 394.8 27.8 277 590-898 1-284 (285)
70 cd05609 STKc_MAST Catalytic do 100.0 5E-45 1.1E-49 392.3 31.8 304 589-908 1-304 (305)
71 cd05608 STKc_GRK1 Catalytic do 100.0 1.5E-45 3.2E-50 392.4 25.1 267 597-897 1-279 (280)
72 KOG0585 Ca2+/calmodulin-depend 100.0 2E-46 4.3E-51 419.8 18.6 274 579-882 87-377 (576)
73 KOG0661 MAPK related serine/th 100.0 2.5E-47 5.4E-52 427.5 11.3 259 586-882 7-296 (538)
74 KOG0591 NIMA (never in mitosis 100.0 1.4E-47 3.1E-52 408.0 8.3 250 584-867 14-274 (375)
75 KOG0198 MEKK and related serin 100.0 5.6E-46 1.2E-50 409.5 19.3 261 588-883 16-282 (313)
76 cd05580 STKc_PKA Catalytic dom 100.0 1.5E-44 3.3E-49 385.2 29.7 284 589-909 1-288 (290)
77 cd07848 STKc_CDKL5 Catalytic d 100.0 4.1E-45 8.8E-50 387.1 24.3 258 589-880 1-287 (287)
78 KOG0032 Ca2+/calmodulin-depend 100.0 4.1E-45 9E-50 413.3 25.6 259 589-883 35-299 (382)
79 KOG0033 Ca2+/calmodulin-depend 100.0 2.5E-47 5.4E-52 400.0 6.1 259 589-883 11-273 (355)
80 KOG0580 Serine/threonine prote 100.0 2.5E-46 5.4E-51 392.1 12.7 261 583-882 16-278 (281)
81 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.9E-45 1.7E-49 388.3 24.0 257 587-880 3-288 (288)
82 KOG0578 p21-activated serine/t 100.0 1E-45 2.2E-50 421.9 18.2 260 585-882 269-528 (550)
83 cd05630 STKc_GRK6 Catalytic do 100.0 2E-44 4.4E-49 385.3 27.0 275 590-898 1-284 (285)
84 cd05607 STKc_GRK7 Catalytic do 100.0 1.9E-44 4E-49 383.4 25.6 264 597-897 1-276 (277)
85 KOG0600 Cdc2-related protein k 100.0 1.9E-45 4.2E-50 414.6 18.0 260 588-882 116-405 (560)
86 cd05574 STKc_phototropin_like 100.0 8.1E-44 1.8E-48 383.5 29.2 306 589-900 1-312 (316)
87 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.5E-44 5.4E-49 386.6 24.0 262 588-886 4-297 (303)
88 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.4E-44 7.3E-49 388.6 24.8 263 590-885 1-298 (338)
89 cd05632 STKc_GRK5 Catalytic do 100.0 1.1E-43 2.3E-48 379.1 27.9 278 590-899 1-285 (285)
90 cd06649 PKc_MEK2 Catalytic dom 100.0 3.5E-43 7.7E-48 384.4 27.6 259 588-884 4-308 (331)
91 KOG0611 Predicted serine/threo 100.0 1.6E-44 3.5E-49 397.0 15.5 253 589-880 53-306 (668)
92 KOG0663 Protein kinase PITSLRE 100.0 5.2E-44 1.1E-48 387.7 19.0 262 586-883 73-367 (419)
93 KOG0582 Ste20-like serine/thre 100.0 2.3E-43 4.9E-48 393.5 23.3 268 585-884 22-300 (516)
94 KOG0659 Cdk activating kinase 100.0 6.6E-44 1.4E-48 378.2 17.9 259 589-883 2-287 (318)
95 cd07862 STKc_CDK6 Catalytic do 100.0 3.8E-43 8.2E-48 372.6 23.8 255 589-880 1-290 (290)
96 cd05610 STKc_MASTL Catalytic d 100.0 1.6E-42 3.4E-47 416.7 31.3 321 587-910 2-667 (669)
97 KOG0660 Mitogen-activated prot 100.0 7.1E-44 1.5E-48 390.6 16.8 261 589-883 22-316 (359)
98 cd05611 STKc_Rim15_like Cataly 100.0 1.2E-42 2.6E-47 362.6 25.0 257 595-886 2-260 (260)
99 cd07863 STKc_CDK4 Catalytic do 100.0 1E-42 2.2E-47 368.3 24.6 254 590-880 1-288 (288)
100 cd07853 STKc_NLK Catalytic dom 100.0 9.9E-43 2.1E-47 386.6 25.5 261 590-885 1-296 (372)
101 PHA03212 serine/threonine kina 100.0 7.4E-43 1.6E-47 394.1 24.2 256 585-883 88-382 (391)
102 cd06625 STKc_MEKK3_like Cataly 100.0 3.2E-42 6.9E-47 358.5 26.8 260 589-880 2-263 (263)
103 PTZ00036 glycogen synthase kin 100.0 7.3E-43 1.6E-47 399.7 23.8 254 589-885 66-359 (440)
104 cd07876 STKc_JNK2 Catalytic do 100.0 2.8E-42 6.2E-47 380.7 26.6 257 587-882 19-320 (359)
105 cd05577 STKc_GRK Catalytic dom 100.0 3E-42 6.5E-47 364.7 25.2 266 597-897 1-276 (277)
106 KOG0599 Phosphorylase kinase g 100.0 3.8E-44 8.1E-49 380.3 10.7 261 588-883 16-289 (411)
107 PTZ00284 protein kinase; Provi 100.0 1.3E-42 2.8E-47 398.8 24.1 253 588-882 128-443 (467)
108 KOG0192 Tyrosine kinase specif 100.0 1.9E-42 4.2E-47 389.1 24.8 253 586-876 38-298 (362)
109 PLN00034 mitogen-activated pro 100.0 1.2E-42 2.7E-47 383.3 22.8 257 585-883 70-334 (353)
110 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.1E-42 4.6E-47 372.6 23.6 260 587-883 4-292 (309)
111 cd06650 PKc_MEK1 Catalytic dom 100.0 4.5E-42 9.7E-47 377.0 26.4 256 588-883 4-305 (333)
112 cd05633 STKc_GRK3 Catalytic do 100.0 4.9E-42 1.1E-46 365.8 25.7 261 596-892 1-270 (279)
113 cd06644 STKc_STK10_LOK Catalyt 100.0 5.5E-42 1.2E-46 365.4 25.7 266 589-891 12-283 (292)
114 cd07875 STKc_JNK1 Catalytic do 100.0 5.3E-42 1.2E-46 379.2 26.0 257 587-882 22-323 (364)
115 cd05572 STKc_cGK_PKG Catalytic 100.0 6.6E-42 1.4E-46 357.4 25.1 257 597-886 1-261 (262)
116 cd05579 STKc_MAST_like Catalyt 100.0 6.3E-42 1.4E-46 353.7 23.6 265 597-885 1-265 (265)
117 KOG0201 Serine/threonine prote 100.0 4E-44 8.6E-49 399.3 7.7 258 589-884 13-270 (467)
118 cd07874 STKc_JNK3 Catalytic do 100.0 5.8E-42 1.3E-46 377.2 24.4 257 587-882 15-316 (355)
119 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.9E-42 6.2E-47 377.4 21.7 256 588-883 14-304 (343)
120 PTZ00267 NIMA-related protein 100.0 1E-41 2.2E-46 393.8 27.3 259 588-883 66-329 (478)
121 cd08223 STKc_Nek4 Catalytic do 100.0 2.6E-41 5.6E-46 350.6 27.4 254 590-880 1-257 (257)
122 PF00069 Pkinase: Protein kina 100.0 2.3E-42 4.9E-47 357.6 19.2 255 591-880 1-260 (260)
123 KOG0594 Protein kinase PCTAIRE 100.0 1.5E-42 3.3E-47 379.9 18.8 260 588-883 10-308 (323)
124 cd05102 PTKc_VEGFR3 Catalytic 100.0 7.8E-42 1.7E-46 372.7 24.2 257 585-876 3-329 (338)
125 cd08529 STKc_FA2-like Catalyti 100.0 3.5E-41 7.5E-46 348.7 27.4 254 590-880 1-256 (256)
126 cd06611 STKc_SLK_like Catalyti 100.0 1E-41 2.2E-46 360.0 23.3 260 589-885 5-270 (280)
127 PTZ00283 serine/threonine prot 100.0 1.3E-41 2.7E-46 395.8 26.4 261 588-883 31-303 (496)
128 KOG0589 Serine/threonine prote 100.0 1.3E-42 2.9E-47 393.2 17.6 259 587-882 2-263 (426)
129 KOG4717 Serine/threonine prote 100.0 1.4E-42 3.1E-47 389.4 17.6 259 588-885 17-278 (864)
130 cd06631 STKc_YSK4 Catalytic do 100.0 2.8E-41 6.2E-46 353.1 25.4 262 590-880 1-265 (265)
131 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.4E-41 7.4E-46 352.2 25.8 261 590-880 1-267 (267)
132 cd05606 STKc_beta_ARK Catalyti 100.0 4E-41 8.7E-46 358.1 26.6 261 596-892 1-270 (278)
133 cd06643 STKc_SLK Catalytic dom 100.0 3.2E-41 7E-46 357.1 25.4 256 591-883 7-268 (282)
134 cd06645 STKc_MAP4K3 Catalytic 100.0 1.5E-41 3.2E-46 355.7 22.1 255 588-879 8-267 (267)
135 KOG0667 Dual-specificity tyros 100.0 1.2E-41 2.6E-46 394.3 23.3 252 590-883 187-508 (586)
136 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.1E-41 4.7E-46 362.9 23.6 261 587-884 4-293 (301)
137 cd06610 STKc_OSR1_SPAK Catalyt 100.0 6.5E-41 1.4E-45 348.0 26.3 260 589-880 1-267 (267)
138 cd06615 PKc_MEK Catalytic doma 100.0 6.4E-41 1.4E-45 362.1 26.8 256 589-882 1-292 (308)
139 cd05578 STKc_Yank1 Catalytic d 100.0 2.5E-41 5.3E-46 352.3 22.6 253 590-880 1-258 (258)
140 cd06619 PKc_MKK5 Catalytic dom 100.0 5.9E-41 1.3E-45 355.8 25.9 252 589-884 1-260 (279)
141 KOG0658 Glycogen synthase kina 100.0 2.4E-42 5.2E-47 379.1 15.4 252 590-884 25-313 (364)
142 PHA03207 serine/threonine kina 100.0 3.2E-41 7E-46 378.8 24.0 260 589-889 92-387 (392)
143 cd06654 STKc_PAK1 Catalytic do 100.0 1.2E-40 2.5E-45 358.2 27.0 260 585-882 16-275 (296)
144 cd07861 STKc_CDK1_euk Catalyti 100.0 5.5E-41 1.2E-45 353.9 24.0 255 590-880 1-285 (285)
145 cd06613 STKc_MAP4K3_like Catal 100.0 1.3E-40 2.8E-45 345.6 26.3 254 589-879 3-262 (262)
146 cd06630 STKc_MEKK1 Catalytic d 100.0 6.2E-41 1.3E-45 349.8 23.9 262 590-881 1-268 (268)
147 cd06646 STKc_MAP4K5 Catalytic 100.0 5.1E-41 1.1E-45 351.6 23.3 255 588-879 8-267 (267)
148 cd07847 STKc_CDKL1_4 Catalytic 100.0 9.4E-41 2E-45 351.6 25.1 257 589-880 1-286 (286)
149 cd07868 STKc_CDK8 Catalytic do 100.0 3.2E-41 6.9E-46 363.6 22.0 250 594-880 6-317 (317)
150 cd06612 STKc_MST1_2 Catalytic 100.0 7E-41 1.5E-45 346.4 23.4 253 589-880 3-256 (256)
151 cd06652 STKc_MEKK2 Catalytic d 100.0 2.1E-40 4.6E-45 347.3 27.3 260 589-881 2-265 (265)
152 cd08218 STKc_Nek1 Catalytic do 100.0 2.4E-40 5.2E-45 343.8 27.2 254 590-880 1-256 (256)
153 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 6.3E-41 1.4E-45 355.0 23.0 257 589-883 1-268 (286)
154 cd06651 STKc_MEKK3 Catalytic d 100.0 1.6E-40 3.5E-45 348.9 25.9 260 589-881 2-265 (266)
155 cd06609 STKc_MST3_like Catalyt 100.0 1.1E-40 2.4E-45 351.1 24.1 257 589-884 1-258 (274)
156 cd08227 PK_STRAD_alpha Pseudok 100.0 6.7E-41 1.5E-45 364.8 23.3 264 593-884 2-314 (327)
157 cd08221 STKc_Nek9 Catalytic do 100.0 4.2E-40 9E-45 342.0 27.6 254 590-880 1-256 (256)
158 PHA02988 hypothetical protein; 100.0 1.5E-40 3.2E-45 356.7 25.0 242 595-876 26-274 (283)
159 cd06656 STKc_PAK3 Catalytic do 100.0 1.4E-40 3.1E-45 357.6 24.6 260 586-883 16-275 (297)
160 cd06639 STKc_myosinIIIB Cataly 100.0 5.3E-40 1.1E-44 349.4 28.7 259 585-881 18-291 (291)
161 cd05061 PTKc_InsR Catalytic do 100.0 2.4E-40 5.2E-45 352.7 25.9 264 586-885 3-288 (288)
162 cd07839 STKc_CDK5 Catalytic do 100.0 5.7E-41 1.2E-45 354.3 20.7 255 590-880 1-284 (284)
163 cd08217 STKc_Nek2 Catalytic do 100.0 3.2E-40 7E-45 341.0 25.7 254 590-880 1-265 (265)
164 cd06637 STKc_TNIK Catalytic do 100.0 1.5E-40 3.3E-45 348.3 23.5 253 589-880 6-272 (272)
165 KOG0579 Ste20-like serine/thre 100.0 3E-42 6.5E-47 392.3 11.2 261 589-886 32-298 (1187)
166 cd08220 STKc_Nek8 Catalytic do 100.0 4.2E-40 9.2E-45 340.6 26.4 253 590-880 1-256 (256)
167 cd06638 STKc_myosinIIIA Cataly 100.0 3.8E-40 8.3E-45 348.4 26.5 256 587-880 16-286 (286)
168 cd05048 PTKc_Ror Catalytic Dom 100.0 1.3E-40 2.8E-45 351.4 22.7 256 586-877 2-279 (283)
169 cd06608 STKc_myosinIII_like Ca 100.0 2.5E-40 5.4E-45 344.4 24.5 255 588-880 5-275 (275)
170 cd06655 STKc_PAK2 Catalytic do 100.0 3.3E-40 7.2E-45 355.2 26.1 257 588-882 18-274 (296)
171 PHA03209 serine/threonine kina 100.0 6.9E-41 1.5E-45 371.3 21.4 250 589-883 66-357 (357)
172 cd06605 PKc_MAPKK Catalytic do 100.0 1.8E-40 3.9E-45 345.8 22.3 254 589-882 1-262 (265)
173 cd05581 STKc_PDK1 Catalytic do 100.0 2.7E-40 5.9E-45 345.7 23.6 275 589-880 1-280 (280)
174 KOG0607 MAP kinase-interacting 100.0 1.2E-41 2.5E-46 367.2 13.5 266 591-886 79-370 (463)
175 cd05583 STKc_MSK_N N-terminal 100.0 2.8E-40 6.1E-45 351.0 23.9 269 590-891 1-280 (288)
176 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.4E-40 3.1E-45 351.0 21.3 257 589-880 1-286 (286)
177 cd06623 PKc_MAPKK_plant_like C 100.0 5.7E-40 1.2E-44 340.4 25.3 258 589-884 1-263 (264)
178 cd08219 STKc_Nek3 Catalytic do 100.0 8E-40 1.7E-44 340.4 26.1 250 590-877 1-252 (255)
179 cd06636 STKc_MAP4K4_6 Catalyti 100.0 6.1E-40 1.3E-44 346.7 25.6 254 588-880 15-282 (282)
180 cd06632 STKc_MEKK1_plant Catal 100.0 7E-40 1.5E-44 338.6 25.2 255 590-880 1-258 (258)
181 KOG0604 MAP kinase-activated p 100.0 1.1E-41 2.4E-46 365.4 12.1 254 587-883 59-328 (400)
182 cd05613 STKc_MSK1_N N-terminal 100.0 6.1E-40 1.3E-44 348.7 25.4 268 590-890 1-281 (290)
183 cd07832 STKc_CCRK Catalytic do 100.0 4.8E-40 1E-44 346.2 24.3 257 590-881 1-286 (286)
184 cd06629 STKc_MAPKKK_Bck1_like 100.0 8.1E-40 1.8E-44 343.5 25.2 259 590-880 2-272 (272)
185 cd07841 STKc_CDK7 Catalytic do 100.0 3.6E-40 7.8E-45 351.2 22.8 259 590-883 1-288 (298)
186 cd05064 PTKc_EphR_A10 Catalyti 100.0 8.3E-40 1.8E-44 344.8 24.9 252 588-876 4-260 (266)
187 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.4E-40 9.6E-45 349.4 22.9 255 588-882 4-271 (284)
188 cd08228 STKc_Nek6 Catalytic do 100.0 1.3E-39 2.8E-44 340.4 25.8 255 588-877 1-261 (267)
189 cd07844 STKc_PCTAIRE_like Cata 100.0 6.7E-40 1.4E-44 348.0 23.9 257 587-880 3-291 (291)
190 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.6E-39 3.5E-44 342.4 26.1 258 589-886 1-270 (283)
191 cd05096 PTKc_DDR1 Catalytic do 100.0 1.2E-39 2.7E-44 349.8 25.6 255 588-876 4-300 (304)
192 PHA03390 pk1 serine/threonine- 100.0 8.7E-40 1.9E-44 346.5 23.9 248 589-882 14-267 (267)
193 cd07833 STKc_CDKL Catalytic do 100.0 8.8E-40 1.9E-44 344.6 23.4 258 589-880 1-288 (288)
194 cd06626 STKc_MEKK4 Catalytic d 100.0 2.4E-39 5.2E-44 336.4 26.3 258 590-880 1-264 (264)
195 cd06640 STKc_MST4 Catalytic do 100.0 7E-40 1.5E-44 346.7 22.7 258 589-885 4-261 (277)
196 cd07850 STKc_JNK Catalytic dom 100.0 8.8E-40 1.9E-44 360.1 24.2 255 588-881 15-315 (353)
197 cd07867 STKc_CDC2L6 Catalytic 100.0 5.4E-40 1.2E-44 352.8 21.9 249 595-880 7-317 (317)
198 cd07860 STKc_CDK2_3 Catalytic 100.0 7.4E-40 1.6E-44 345.8 22.5 255 590-880 1-284 (284)
199 cd08215 STKc_Nek Catalytic dom 100.0 3.5E-39 7.6E-44 331.3 26.4 254 590-880 1-258 (258)
200 cd07845 STKc_CDK10 Catalytic d 100.0 1.1E-39 2.5E-44 350.9 23.8 261 587-883 5-296 (309)
201 cd06624 STKc_ASK Catalytic dom 100.0 3.4E-39 7.3E-44 338.7 26.6 254 589-880 8-268 (268)
202 cd06648 STKc_PAK_II Catalytic 100.0 2.9E-39 6.4E-44 345.0 26.4 256 590-883 20-275 (285)
203 cd05049 PTKc_Trk Catalytic dom 100.0 1.1E-39 2.3E-44 343.3 22.2 253 588-876 4-276 (280)
204 cd05088 PTKc_Tie2 Catalytic do 100.0 2.5E-39 5.5E-44 348.9 25.6 253 586-877 4-276 (303)
205 PHA03211 serine/threonine kina 100.0 1.5E-39 3.2E-44 376.2 25.3 252 589-882 169-460 (461)
206 cd05106 PTKc_CSF-1R Catalytic 100.0 8.5E-40 1.8E-44 366.0 22.6 258 584-876 33-367 (374)
207 cd07837 STKc_CdkB_plant Cataly 100.0 1.4E-39 3.1E-44 345.5 23.2 257 589-881 1-295 (295)
208 cd06606 STKc_MAPKKK Catalytic 100.0 6.5E-39 1.4E-43 328.1 27.2 257 590-880 1-260 (260)
209 cd05090 PTKc_Ror1 Catalytic do 100.0 2.5E-39 5.3E-44 342.9 24.9 255 587-877 3-279 (283)
210 cd05052 PTKc_Abl Catalytic dom 100.0 3.1E-39 6.8E-44 338.7 25.2 252 586-876 3-257 (263)
211 cd06659 STKc_PAK6 Catalytic do 100.0 8.8E-40 1.9E-44 352.0 21.4 256 589-882 21-276 (297)
212 cd06627 STKc_Cdc7_like Catalyt 100.0 6.1E-39 1.3E-43 330.2 26.5 254 590-880 1-254 (254)
213 cd07843 STKc_CDC2L1 Catalytic 100.0 1.5E-39 3.2E-44 346.3 22.6 258 587-880 3-293 (293)
214 cd08225 STKc_Nek5 Catalytic do 100.0 2.6E-39 5.7E-44 334.9 23.8 254 590-880 1-257 (257)
215 PLN00009 cyclin-dependent kina 100.0 1.9E-39 4.1E-44 345.6 23.5 260 588-883 1-290 (294)
216 cd06647 STKc_PAK_I Catalytic d 100.0 2.1E-39 4.5E-44 348.0 23.8 260 586-883 16-275 (293)
217 cd06653 STKc_MEKK3_like_1 Cata 100.0 6.6E-39 1.4E-43 336.4 27.1 259 589-880 2-264 (264)
218 cd06658 STKc_PAK5 Catalytic do 100.0 6.7E-40 1.5E-44 352.1 20.0 257 589-883 22-278 (292)
219 cd07836 STKc_Pho85 Catalytic d 100.0 2.5E-39 5.4E-44 341.2 23.7 254 590-880 1-284 (284)
220 cd07865 STKc_CDK9 Catalytic do 100.0 3.2E-39 6.9E-44 343.8 24.7 264 585-880 8-310 (310)
221 cd06641 STKc_MST3 Catalytic do 100.0 3.9E-39 8.5E-44 341.0 25.1 255 590-883 5-259 (277)
222 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.5E-40 7.6E-45 348.4 17.1 258 589-885 4-261 (277)
223 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 7.2E-39 1.6E-43 341.2 27.1 258 589-884 1-273 (287)
224 cd05122 PKc_STE Catalytic doma 100.0 1.1E-38 2.4E-43 325.1 26.9 250 590-879 1-253 (253)
225 cd06614 STKc_PAK Catalytic dom 100.0 5.5E-39 1.2E-43 340.8 25.5 261 588-886 18-279 (286)
226 cd05114 PTKc_Tec_Rlk Catalytic 100.0 4.6E-39 1E-43 335.5 24.5 249 588-876 3-253 (256)
227 cd06917 STKc_NAK1_like Catalyt 100.0 2.9E-39 6.2E-44 340.2 23.1 256 590-884 2-262 (277)
228 cd05032 PTKc_InsR_like Catalyt 100.0 6.1E-39 1.3E-43 337.0 25.5 255 586-876 3-273 (277)
229 cd07831 STKc_MOK Catalytic dom 100.0 3.5E-39 7.6E-44 339.1 23.6 251 591-880 1-282 (282)
230 cd05062 PTKc_IGF-1R Catalytic 100.0 4.2E-39 9E-44 340.2 24.1 255 587-877 4-274 (277)
231 cd05104 PTKc_Kit Catalytic dom 100.0 2E-39 4.4E-44 362.7 22.9 259 584-877 30-370 (375)
232 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.2E-39 7E-44 343.4 23.2 256 588-880 4-291 (291)
233 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 9.9E-39 2.2E-43 332.4 26.3 252 589-876 2-260 (267)
234 PTZ00266 NIMA-related protein 100.0 3.2E-39 7E-44 395.8 26.3 262 586-885 10-303 (1021)
235 cd06607 STKc_TAO Catalytic dom 100.0 7.5E-39 1.6E-43 344.8 26.0 254 589-882 15-272 (307)
236 cd06616 PKc_MKK4 Catalytic dom 100.0 3.3E-39 7.1E-44 342.2 22.7 262 589-888 4-278 (288)
237 cd08530 STKc_CNK2-like Catalyt 100.0 7E-39 1.5E-43 330.8 24.5 252 590-880 1-256 (256)
238 cd08229 STKc_Nek7 Catalytic do 100.0 3.5E-39 7.5E-44 337.1 22.5 254 588-876 1-260 (267)
239 KOG0586 Serine/threonine prote 100.0 1.2E-39 2.6E-44 375.1 20.5 259 585-882 52-311 (596)
240 cd05123 STKc_AGC Catalytic dom 100.0 4.8E-39 1E-43 331.6 23.0 247 597-880 1-250 (250)
241 cd00192 PTKc Catalytic domain 100.0 7.8E-39 1.7E-43 329.4 24.4 247 595-877 1-260 (262)
242 KOG4279 Serine/threonine prote 100.0 4.2E-40 9.2E-45 378.0 16.3 250 595-883 581-838 (1226)
243 cd05093 PTKc_TrkB Catalytic do 100.0 6.9E-39 1.5E-43 341.5 24.5 251 589-876 5-274 (288)
244 cd07842 STKc_CDK8_like Catalyt 100.0 2.8E-39 6E-44 345.9 21.5 259 590-880 1-316 (316)
245 cd05072 PTKc_Lyn Catalytic dom 100.0 1.1E-38 2.3E-43 333.1 25.0 251 586-876 3-256 (261)
246 cd07849 STKc_ERK1_2_like Catal 100.0 3.3E-39 7.1E-44 352.9 22.0 260 589-883 5-298 (336)
247 cd07880 STKc_p38gamma_MAPK12 C 100.0 6.5E-39 1.4E-43 352.9 24.5 256 588-883 14-304 (343)
248 cd05035 PTKc_Axl_like Catalyti 100.0 9.2E-39 2E-43 333.7 24.4 252 591-877 1-268 (273)
249 cd05091 PTKc_Ror2 Catalytic do 100.0 2.9E-39 6.2E-44 341.8 20.7 255 587-877 3-279 (283)
250 cd05053 PTKc_FGFR Catalytic do 100.0 1.2E-38 2.6E-43 338.7 25.5 258 584-877 7-287 (293)
251 KOG0574 STE20-like serine/thre 100.0 1.4E-41 3.1E-46 363.6 2.9 257 589-884 33-290 (502)
252 cd05036 PTKc_ALK_LTK Catalytic 100.0 9.9E-39 2.1E-43 337.9 24.3 253 589-877 6-274 (277)
253 cd05051 PTKc_DDR Catalytic dom 100.0 1.1E-38 2.3E-43 338.9 24.2 256 588-877 4-293 (296)
254 cd07835 STKc_CDK1_like Catalyt 100.0 5.5E-39 1.2E-43 339.1 21.8 254 591-880 1-283 (283)
255 cd07855 STKc_ERK5 Catalytic do 100.0 3.6E-39 7.9E-44 352.2 21.1 263 589-883 5-300 (334)
256 PHA03210 serine/threonine kina 100.0 3.6E-39 7.8E-44 375.4 22.0 267 588-888 147-465 (501)
257 cd05084 PTKc_Fes Catalytic dom 100.0 1.1E-38 2.4E-43 331.3 23.2 246 595-876 1-248 (252)
258 cd07838 STKc_CDK4_6_like Catal 100.0 1.6E-38 3.4E-43 334.2 24.6 253 591-880 1-287 (287)
259 cd07858 STKc_TEY_MAPK_plant Ca 100.0 6.1E-39 1.3E-43 351.4 22.2 259 589-883 5-297 (337)
260 cd05108 PTKc_EGFR Catalytic do 100.0 1.3E-38 2.9E-43 344.7 24.3 254 587-877 5-264 (316)
261 cd05033 PTKc_EphR Catalytic do 100.0 2.4E-38 5.2E-43 331.9 25.4 254 588-877 3-261 (266)
262 cd07834 STKc_MAPK Catalytic do 100.0 4.4E-39 9.5E-44 348.8 20.1 261 590-883 1-295 (330)
263 cd05082 PTKc_Csk Catalytic dom 100.0 2.4E-38 5.3E-43 330.1 24.8 246 585-876 2-251 (256)
264 cd07879 STKc_p38delta_MAPK13 C 100.0 8.2E-39 1.8E-43 351.5 21.7 256 589-885 15-305 (342)
265 cd05089 PTKc_Tie1 Catalytic do 100.0 2.4E-38 5.3E-43 339.3 24.8 250 589-877 2-271 (297)
266 cd07866 STKc_BUR1 Catalytic do 100.0 1.9E-38 4E-43 338.1 23.6 268 588-880 7-311 (311)
267 cd05116 PTKc_Syk Catalytic dom 100.0 2.1E-38 4.6E-43 331.3 23.4 246 596-876 2-250 (257)
268 cd08226 PK_STRAD_beta Pseudoki 100.0 5.8E-39 1.3E-43 349.8 19.8 260 596-883 5-314 (328)
269 cd05109 PTKc_HER2 Catalytic do 100.0 3.1E-38 6.7E-43 333.9 24.6 252 588-876 6-263 (279)
270 cd05054 PTKc_VEGFR Catalytic d 100.0 1.2E-38 2.6E-43 351.3 22.3 259 584-877 2-329 (337)
271 cd05075 PTKc_Axl Catalytic dom 100.0 2.5E-38 5.3E-43 331.6 23.2 252 591-877 1-267 (272)
272 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.7E-38 5.9E-43 340.5 24.2 255 587-877 16-295 (307)
273 KOG4236 Serine/threonine prote 100.0 1.4E-39 3.1E-44 365.9 14.7 261 591-890 564-833 (888)
274 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3E-38 6.5E-43 331.1 23.7 250 588-877 3-254 (256)
275 cd05059 PTKc_Tec_like Catalyti 100.0 2.1E-38 4.6E-43 331.1 22.4 250 588-877 3-254 (256)
276 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.4E-38 3E-43 331.6 20.8 248 589-876 6-256 (261)
277 cd05039 PTKc_Csk_like Catalyti 100.0 6.5E-38 1.4E-42 326.2 25.5 245 587-876 4-251 (256)
278 cd06633 STKc_TAO3 Catalytic do 100.0 7.6E-38 1.6E-42 339.4 27.0 255 590-884 22-280 (313)
279 cd05068 PTKc_Frk_like Catalyti 100.0 5.1E-38 1.1E-42 328.6 24.7 250 587-876 4-256 (261)
280 cd07840 STKc_CDK9_like Catalyt 100.0 3E-38 6.5E-43 331.4 22.7 255 591-880 1-287 (287)
281 cd05094 PTKc_TrkC Catalytic do 100.0 4.3E-38 9.4E-43 335.9 24.2 252 588-876 4-277 (291)
282 cd05092 PTKc_TrkA Catalytic do 100.0 3.8E-38 8.3E-43 334.5 23.3 252 588-876 4-276 (280)
283 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.2E-38 1.1E-42 328.3 23.9 250 586-876 3-255 (260)
284 cd06635 STKc_TAO1 Catalytic do 100.0 8.2E-38 1.8E-42 339.2 26.0 254 589-882 25-282 (317)
285 PTZ00024 cyclin-dependent prot 100.0 4.5E-38 9.8E-43 342.7 24.1 274 589-883 8-319 (335)
286 cd05060 PTKc_Syk_like Catalyti 100.0 7.6E-38 1.7E-42 326.5 24.8 246 595-876 1-250 (257)
287 cd07877 STKc_p38alpha_MAPK14 C 100.0 5.5E-38 1.2E-42 345.8 24.8 254 589-882 17-305 (345)
288 cd07851 STKc_p38 Catalytic dom 100.0 2.4E-38 5.2E-43 347.9 21.7 255 588-882 14-303 (343)
289 cd05099 PTKc_FGFR4 Catalytic d 100.0 1E-37 2.2E-42 337.6 26.1 254 587-876 10-288 (314)
290 cd05046 PTK_CCK4 Pseudokinase 100.0 6.5E-38 1.4E-42 329.6 23.8 253 589-877 5-272 (275)
291 cd05105 PTKc_PDGFR_alpha Catal 100.0 6.4E-38 1.4E-42 355.7 25.5 259 583-876 31-392 (400)
292 cd07864 STKc_CDK12 Catalytic d 100.0 4.1E-38 8.8E-43 335.4 22.4 259 587-880 5-302 (302)
293 KOG0197 Tyrosine kinases [Sign 100.0 9.6E-39 2.1E-43 363.5 18.7 247 584-867 201-450 (468)
294 cd08222 STKc_Nek11 Catalytic d 100.0 3.1E-38 6.8E-43 329.3 21.1 254 590-880 1-260 (260)
295 cd05065 PTKc_EphR_B Catalytic 100.0 1.2E-37 2.6E-42 327.1 25.3 256 588-876 3-263 (269)
296 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.1E-37 2.3E-42 326.0 24.7 248 588-876 5-255 (260)
297 cd05101 PTKc_FGFR2 Catalytic d 100.0 7.9E-38 1.7E-42 335.9 24.3 257 585-877 11-292 (304)
298 cd05066 PTKc_EphR_A Catalytic 100.0 1E-37 2.2E-42 328.0 24.3 254 588-876 3-261 (267)
299 cd06657 STKc_PAK4 Catalytic do 100.0 4.1E-38 8.8E-43 338.8 21.5 254 591-882 22-275 (292)
300 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.9E-38 1.3E-42 344.8 23.1 259 589-883 5-306 (342)
301 cd05055 PTKc_PDGFR Catalytic d 100.0 9.5E-38 2.1E-42 337.0 24.4 258 584-876 30-296 (302)
302 cd05034 PTKc_Src_like Catalyti 100.0 1.8E-37 3.9E-42 323.2 25.6 251 586-876 3-256 (261)
303 cd05118 STKc_CMGC Catalytic do 100.0 4.1E-38 8.8E-43 330.5 20.9 254 591-880 1-283 (283)
304 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.6E-37 3.4E-42 325.5 25.2 254 588-876 4-262 (268)
305 cd05071 PTKc_Src Catalytic dom 100.0 9.5E-38 2.1E-42 328.4 23.7 248 588-876 5-255 (262)
306 cd05115 PTKc_Zap-70 Catalytic 100.0 1.1E-37 2.4E-42 327.5 24.0 245 596-876 2-250 (257)
307 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.3E-37 2.8E-42 341.1 25.5 255 588-882 9-293 (328)
308 cd06618 PKc_MKK7 Catalytic dom 100.0 1.2E-37 2.6E-42 333.3 24.6 260 585-882 11-278 (296)
309 PRK13184 pknD serine/threonine 100.0 1.2E-37 2.6E-42 380.6 27.6 273 588-876 1-285 (932)
310 cd05050 PTKc_Musk Catalytic do 100.0 1E-37 2.2E-42 331.4 23.6 253 588-876 4-284 (288)
311 cd07857 STKc_MPK1 Catalytic do 100.0 8.3E-38 1.8E-42 341.3 23.4 261 590-882 1-297 (332)
312 cd05047 PTKc_Tie Catalytic dom 100.0 1.8E-37 3.9E-42 327.1 25.1 242 596-876 2-263 (270)
313 smart00219 TyrKc Tyrosine kina 100.0 1.7E-37 3.6E-42 320.2 24.0 249 591-876 1-256 (258)
314 cd05097 PTKc_DDR_like Catalyti 100.0 9.5E-38 2.1E-42 333.9 22.8 254 589-876 5-291 (295)
315 cd05045 PTKc_RET Catalytic dom 100.0 1.6E-37 3.5E-42 330.8 24.4 251 590-876 1-281 (290)
316 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.6E-37 3.4E-42 339.4 24.4 258 584-877 7-289 (334)
317 cd07829 STKc_CDK_like Catalyti 100.0 7.5E-38 1.6E-42 328.3 21.0 254 591-880 1-282 (282)
318 cd05111 PTK_HER3 Pseudokinase 100.0 2.1E-37 4.6E-42 329.2 24.7 253 587-876 5-263 (279)
319 cd08216 PK_STRAD Pseudokinase 100.0 5.6E-38 1.2E-42 337.3 20.4 255 601-883 12-301 (314)
320 cd05040 PTKc_Ack_like Catalyti 100.0 2.1E-37 4.5E-42 322.0 23.9 247 595-876 1-253 (257)
321 cd06634 STKc_TAO2 Catalytic do 100.0 2.3E-37 4.9E-42 334.5 24.4 255 589-883 15-273 (308)
322 cd05112 PTKc_Itk Catalytic dom 100.0 3.1E-37 6.7E-42 320.5 24.5 250 588-877 3-254 (256)
323 cd07830 STKc_MAK_like Catalyti 100.0 1.8E-37 3.9E-42 326.9 23.0 252 591-880 1-283 (283)
324 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.2E-37 2.5E-42 343.0 22.5 259 584-877 2-335 (343)
325 cd05069 PTKc_Yes Catalytic dom 100.0 3.1E-37 6.8E-42 323.0 24.6 248 588-876 5-255 (260)
326 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.2E-37 9.1E-42 325.9 25.8 253 589-876 3-276 (283)
327 cd07852 STKc_MAPK15 Catalytic 100.0 6.7E-38 1.5E-42 342.2 19.9 264 588-883 6-301 (337)
328 cd05057 PTKc_EGFR_like Catalyt 100.0 4.6E-37 1E-41 325.0 25.6 252 588-876 6-263 (279)
329 cd05095 PTKc_DDR2 Catalytic do 100.0 3.4E-37 7.3E-42 329.8 24.6 254 589-876 5-292 (296)
330 cd05576 STKc_RPK118_like Catal 100.0 1.1E-37 2.3E-42 324.5 20.2 232 600-880 4-237 (237)
331 cd05041 PTKc_Fes_like Catalyti 100.0 3.7E-37 8.1E-42 319.0 23.9 246 595-877 1-248 (251)
332 KOG4721 Serine/threonine prote 100.0 1.4E-38 3.1E-43 360.5 14.0 247 584-878 119-365 (904)
333 KOG0596 Dual specificity; seri 100.0 3.5E-38 7.7E-43 358.2 17.1 256 590-883 362-633 (677)
334 cd05085 PTKc_Fer Catalytic dom 100.0 5.7E-37 1.2E-41 317.5 24.6 245 595-877 1-247 (250)
335 KOG4645 MAPKKK (MAP kinase kin 100.0 1.4E-39 3.1E-44 394.3 5.7 259 590-881 1236-1498(1509)
336 KOG0577 Serine/threonine prote 100.0 1.2E-38 2.6E-43 362.2 12.8 254 590-883 27-284 (948)
337 cd05073 PTKc_Hck Catalytic dom 100.0 9.5E-37 2.1E-41 319.4 26.2 250 586-876 3-255 (260)
338 cd05056 PTKc_FAK Catalytic dom 100.0 6.3E-37 1.4E-41 321.8 24.5 252 588-877 5-261 (270)
339 cd05083 PTKc_Chk Catalytic dom 100.0 5.1E-37 1.1E-41 319.8 23.3 243 587-876 4-249 (254)
340 KOG1989 ARK protein kinase fam 100.0 1.3E-37 2.8E-42 369.6 21.2 256 589-877 37-307 (738)
341 PF07714 Pkinase_Tyr: Protein 100.0 2.4E-37 5.2E-42 326.4 20.2 249 592-876 2-257 (259)
342 cd05043 PTK_Ryk Pseudokinase d 100.0 9.6E-37 2.1E-41 322.1 24.6 253 588-876 5-271 (280)
343 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7.7E-37 1.7E-41 324.6 24.0 253 591-877 6-279 (284)
344 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.8E-37 1E-41 348.9 23.6 260 583-877 31-395 (401)
345 cd05042 PTKc_Aatyk Catalytic d 100.0 1E-36 2.2E-41 320.1 23.7 247 595-876 1-265 (269)
346 KOG0194 Protein tyrosine kinas 100.0 2.3E-37 4.9E-42 355.7 20.3 265 577-876 145-415 (474)
347 cd05044 PTKc_c-ros Catalytic d 100.0 6.1E-37 1.3E-41 320.6 21.6 245 596-876 2-265 (269)
348 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.8E-37 6.2E-42 323.6 18.9 237 596-877 2-256 (258)
349 KOG0603 Ribosomal protein S6 k 100.0 6E-38 1.3E-42 362.5 15.0 244 587-880 320-566 (612)
350 cd05058 PTKc_Met_Ron Catalytic 100.0 1.3E-36 2.9E-41 316.8 23.6 249 595-877 1-255 (262)
351 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.5E-36 3.2E-41 321.3 24.2 253 589-876 4-278 (284)
352 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.1E-36 4.5E-41 318.4 24.1 247 595-876 1-265 (269)
353 cd05110 PTKc_HER4 Catalytic do 100.0 2.3E-36 4.9E-41 325.5 23.3 254 587-877 5-264 (303)
354 cd08528 STKc_Nek10 Catalytic d 100.0 3.1E-36 6.8E-41 315.8 23.7 252 590-877 1-266 (269)
355 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.1E-36 4.6E-41 313.6 21.7 235 595-876 1-256 (259)
356 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.6E-36 5.7E-41 317.0 22.6 254 589-876 4-278 (284)
357 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.5E-36 7.5E-41 317.7 23.5 238 595-877 1-260 (262)
358 cd05074 PTKc_Tyro3 Catalytic d 100.0 3E-36 6.5E-41 316.0 22.4 252 591-877 1-268 (273)
359 KOG0584 Serine/threonine prote 100.0 2E-37 4.3E-42 357.2 14.6 253 592-883 43-302 (632)
360 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.9E-36 6.3E-41 320.7 22.0 237 596-877 2-272 (274)
361 cd05086 PTKc_Aatyk2 Catalytic 100.0 7.2E-36 1.6E-40 315.2 23.9 246 596-876 2-264 (268)
362 KOG2345 Serine/threonine prote 100.0 9.5E-37 2.1E-41 321.4 15.2 262 587-877 19-296 (302)
363 PHA02882 putative serine/threo 100.0 1.5E-35 3.3E-40 318.7 23.8 256 589-876 12-291 (294)
364 KOG0662 Cyclin-dependent kinas 100.0 6.7E-37 1.5E-41 310.2 11.0 259 589-883 2-289 (292)
365 KOG0671 LAMMER dual specificit 100.0 5.9E-37 1.3E-41 337.6 11.5 254 588-883 88-412 (415)
366 KOG0193 Serine/threonine prote 100.0 1.6E-36 3.5E-41 348.0 15.2 258 582-876 385-648 (678)
367 KOG0983 Mitogen-activated prot 100.0 1.8E-36 4E-41 322.2 14.2 259 587-883 90-355 (391)
368 KOG1035 eIF-2alpha kinase GCN2 100.0 1.2E-36 2.6E-41 367.7 13.8 273 588-881 478-875 (1351)
369 KOG1026 Nerve growth factor re 100.0 3.9E-36 8.4E-41 356.1 17.8 257 586-875 483-759 (774)
370 KOG0666 Cyclin C-dependent kin 100.0 2.6E-37 5.7E-42 332.9 7.2 263 588-883 23-343 (438)
371 smart00220 S_TKc Serine/Threon 100.0 9.9E-35 2.2E-39 293.1 22.5 243 601-880 1-244 (244)
372 KOG1290 Serine/threonine prote 100.0 3E-35 6.4E-40 330.9 19.1 152 567-723 54-222 (590)
373 PLN03225 Serine/threonine-prot 100.0 1.5E-34 3.3E-39 342.0 23.2 262 585-888 128-461 (566)
374 KOG1151 Tousled-like protein k 100.0 1.1E-35 2.4E-40 329.8 12.3 265 589-881 463-745 (775)
375 KOG1187 Serine/threonine prote 100.0 2E-34 4.4E-39 324.3 22.5 251 588-876 74-347 (361)
376 KOG0670 U4/U6-associated splic 100.0 8.7E-36 1.9E-40 336.0 11.3 265 577-882 419-751 (752)
377 KOG0587 Traf2- and Nck-interac 100.0 1.2E-34 2.7E-39 342.3 20.0 257 589-883 19-288 (953)
378 KOG1095 Protein tyrosine kinas 100.0 4.2E-34 9.2E-39 348.4 23.3 253 588-876 691-956 (1025)
379 KOG4250 TANK binding protein k 100.0 8.5E-35 1.8E-39 338.8 14.7 242 590-866 14-296 (732)
380 KOG0669 Cyclin T-dependent kin 100.0 2.9E-36 6.3E-41 317.8 1.2 262 589-882 17-320 (376)
381 PLN03224 probable serine/threo 100.0 1.3E-32 2.8E-37 321.4 24.7 264 585-882 141-505 (507)
382 KOG0665 Jun-N-terminal kinase 100.0 1.6E-33 3.5E-38 305.2 11.4 256 588-885 16-316 (369)
383 KOG0603 Ribosomal protein S6 k 100.0 8.9E-34 1.9E-38 328.0 7.4 277 596-917 1-285 (612)
384 KOG4278 Protein tyrosine kinas 100.0 3.5E-32 7.5E-37 310.2 20.1 263 582-880 260-525 (1157)
385 KOG1006 Mitogen-activated prot 100.0 9.2E-34 2E-38 300.9 6.6 260 586-883 61-333 (361)
386 KOG4257 Focal adhesion tyrosin 100.0 2.3E-32 5.1E-37 312.7 16.9 245 589-868 389-639 (974)
387 KOG0668 Casein kinase II, alph 100.0 4.3E-33 9.2E-38 291.0 8.8 256 583-883 33-328 (338)
388 PLN00113 leucine-rich repeat r 100.0 5.2E-32 1.1E-36 335.6 19.6 240 589-877 690-947 (968)
389 KOG0664 Nemo-like MAPK-related 100.0 1.8E-33 4E-38 298.8 5.0 260 591-885 55-351 (449)
390 KOG0199 ACK and related non-re 100.0 2.3E-32 5E-37 315.8 14.0 253 588-876 109-367 (1039)
391 KOG1094 Discoidin domain recep 100.0 6.3E-32 1.4E-36 308.2 15.5 254 589-877 538-800 (807)
392 KOG0196 Tyrosine kinase, EPH ( 100.0 5.8E-32 1.3E-36 316.1 13.1 256 587-877 627-887 (996)
393 KOG1027 Serine/threonine prote 100.0 4.2E-32 9.2E-37 319.8 11.2 246 594-881 514-771 (903)
394 KOG0606 Microtubule-associated 100.0 4.3E-32 9.3E-37 325.7 11.2 269 587-911 81-349 (1205)
395 KOG1152 Signal transduction se 100.0 3.5E-32 7.6E-37 310.2 9.6 203 587-822 559-771 (772)
396 KOG0576 Mitogen-activated prot 100.0 2.1E-32 4.5E-37 316.0 7.6 258 588-882 14-276 (829)
397 KOG1167 Serine/threonine prote 100.0 6.3E-31 1.4E-35 293.0 13.0 284 589-883 36-387 (418)
398 KOG0200 Fibroblast/platelet-de 100.0 9.7E-30 2.1E-34 303.6 22.6 257 583-876 290-574 (609)
399 cd00180 PKc Catalytic domain o 100.0 3E-29 6.4E-34 245.3 22.0 212 597-878 1-215 (215)
400 smart00221 STYKc Protein kinas 100.0 6.9E-29 1.5E-33 250.0 20.6 214 591-836 1-218 (225)
401 KOG2052 Activin A type IB rece 100.0 1E-28 2.2E-33 276.6 18.2 249 588-876 210-498 (513)
402 KOG3653 Transforming growth fa 100.0 3.3E-29 7.2E-34 281.9 14.1 243 588-869 209-494 (534)
403 KOG1025 Epidermal growth facto 100.0 9.5E-29 2.1E-33 289.8 14.0 248 591-875 698-951 (1177)
404 KOG0984 Mitogen-activated prot 100.0 1.7E-28 3.8E-33 253.8 11.9 214 589-837 46-270 (282)
405 COG0515 SPS1 Serine/threonine 99.9 3E-26 6.4E-31 232.4 24.8 261 591-882 2-280 (384)
406 PLN00181 protein SPA1-RELATED; 99.9 2.8E-28 6E-33 298.3 11.6 223 649-882 33-270 (793)
407 KOG1345 Serine/threonine kinas 99.9 3E-27 6.4E-32 252.1 8.5 240 588-866 23-276 (378)
408 smart00750 KIND kinase non-cat 99.9 1.2E-26 2.6E-31 230.0 10.4 161 674-881 1-169 (176)
409 KOG1024 Receptor-like protein 99.9 1.5E-24 3.2E-29 239.8 15.0 252 589-876 284-550 (563)
410 KOG0590 Checkpoint kinase and 99.9 1.2E-25 2.7E-30 267.7 6.6 262 592-884 321-592 (601)
411 PRK09188 serine/threonine prot 99.9 5.3E-24 1.1E-28 240.4 18.2 176 585-794 14-194 (365)
412 KOG1164 Casein kinase (serine/ 99.9 3.1E-23 6.8E-28 228.9 22.1 251 590-867 19-286 (322)
413 KOG1163 Casein kinase (serine/ 99.9 1.8E-22 4E-27 213.0 11.8 275 587-891 13-304 (341)
414 KOG1165 Casein kinase (serine/ 99.9 7E-22 1.5E-26 215.8 13.5 247 590-866 29-287 (449)
415 cd05147 RIO1_euk RIO kinase fa 99.9 6.9E-22 1.5E-26 204.0 11.0 140 594-737 2-165 (190)
416 cd05145 RIO1_like RIO kinase f 99.9 7.1E-21 1.5E-25 195.1 15.0 141 594-738 2-166 (190)
417 PRK10359 lipopolysaccharide co 99.8 7.2E-21 1.6E-25 203.1 13.8 138 589-737 31-182 (232)
418 PF14531 Kinase-like: Kinase-l 99.8 1.3E-20 2.8E-25 206.6 15.9 233 591-865 14-288 (288)
419 KOG1240 Protein kinase contain 99.8 6.3E-22 1.4E-26 238.9 5.6 244 590-877 24-291 (1431)
420 KOG4158 BRPK/PTEN-induced prot 99.8 5.3E-21 1.1E-25 212.4 11.3 273 585-885 153-521 (598)
421 PRK12274 serine/threonine prot 99.8 1.9E-19 4E-24 190.1 15.1 203 592-825 5-212 (218)
422 PRK10345 hypothetical protein; 99.8 9.1E-19 2E-23 184.4 14.9 135 594-737 7-157 (210)
423 smart00090 RIO RIO-like kinase 99.8 1.7E-18 3.7E-23 185.0 12.0 143 590-737 29-196 (237)
424 KOG0195 Integrin-linked kinase 99.8 7.5E-19 1.6E-23 188.0 6.8 243 584-868 185-436 (448)
425 KOG1166 Mitotic checkpoint ser 99.8 1.2E-18 2.6E-23 214.0 9.5 194 588-817 697-900 (974)
426 PRK14879 serine/threonine prot 99.8 8.9E-18 1.9E-22 172.2 14.0 137 595-738 2-143 (211)
427 KOG0590 Checkpoint kinase and 99.7 1.7E-19 3.8E-24 215.4 0.0 263 588-882 19-291 (601)
428 TIGR03724 arch_bud32 Kae1-asso 99.7 2.9E-17 6.3E-22 167.2 13.0 133 596-738 1-138 (199)
429 cd05144 RIO2_C RIO kinase fami 99.7 4.2E-17 9.2E-22 167.5 11.5 136 591-737 17-173 (198)
430 PRK09605 bifunctional UGMP fam 99.7 1.4E-16 3E-21 188.0 14.9 138 590-738 334-476 (535)
431 cd05119 RIO RIO kinase family, 99.7 1.7E-16 3.7E-21 159.8 11.4 136 594-737 2-162 (187)
432 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.4E-17 2.9E-22 191.5 1.9 183 662-880 329-515 (516)
433 cd05120 APH_ChoK_like Aminogly 99.6 2.4E-15 5.3E-20 141.6 12.3 132 593-738 2-138 (155)
434 PRK01723 3-deoxy-D-manno-octul 99.6 6.9E-15 1.5E-19 157.5 14.6 137 595-738 37-191 (239)
435 KOG1023 Natriuretic peptide re 99.6 1.4E-14 3.1E-19 168.4 13.7 197 643-868 1-214 (484)
436 KOG0601 Cyclin-dependent kinas 99.4 7.9E-14 1.7E-18 162.8 5.6 260 590-883 115-385 (524)
437 PRK04750 ubiB putative ubiquin 99.4 2.7E-13 5.8E-18 160.5 6.6 144 587-738 118-313 (537)
438 TIGR01982 UbiB 2-polyprenylphe 99.3 6.5E-12 1.4E-16 145.8 13.0 138 595-738 123-306 (437)
439 cd05151 ChoK Choline Kinase (C 99.3 5.3E-12 1.2E-16 124.7 9.9 128 594-738 3-136 (170)
440 KOG0601 Cyclin-dependent kinas 99.3 2.3E-12 4.9E-17 150.8 6.8 250 587-880 263-517 (524)
441 cd05146 RIO3_euk RIO kinase fa 99.3 5E-11 1.1E-15 125.2 13.5 138 595-737 3-172 (197)
442 KOG1243 Protein kinase [Genera 99.2 6.9E-11 1.5E-15 140.0 15.3 169 607-816 30-199 (690)
443 cd05154 ACAD10_11_like Acyl-Co 99.1 3.5E-10 7.6E-15 115.7 11.5 141 594-738 3-206 (223)
444 KOG1266 Protein kinase [Signal 99.1 1.6E-10 3.5E-15 127.7 8.4 215 639-889 117-343 (458)
445 COG3642 Mn2+-dependent serine/ 99.0 1.3E-09 2.7E-14 113.6 11.9 134 595-738 2-140 (204)
446 KOG3087 Serine/threonine prote 98.9 1.7E-08 3.7E-13 105.2 12.9 144 593-738 11-165 (229)
447 PF01163 RIO1: RIO1 family; I 98.8 4.3E-08 9.2E-13 102.5 11.2 126 604-737 1-154 (188)
448 PRK15123 lipopolysaccharide co 98.7 2.2E-07 4.9E-12 102.0 15.2 131 605-737 38-193 (268)
449 KOG2137 Protein kinase [Signal 98.7 1.4E-08 3.1E-13 121.1 6.3 168 697-889 107-277 (700)
450 KOG3741 Poly(A) ribonuclease s 98.6 4.2E-07 9E-12 106.0 15.1 211 602-877 289-521 (655)
451 KOG0576 Mitogen-activated prot 98.6 8.1E-09 1.8E-13 122.1 -1.0 256 575-882 228-489 (829)
452 PF06293 Kdo: Lipopolysacchari 98.5 5E-07 1.1E-11 94.8 11.0 105 634-738 56-170 (206)
453 COG0478 RIO-like serine/threon 98.4 1E-06 2.2E-11 96.8 8.8 137 591-737 93-250 (304)
454 PF01636 APH: Phosphotransfera 98.3 1E-05 2.2E-10 82.9 14.1 138 594-738 2-197 (239)
455 COG4248 Uncharacterized protei 98.3 5E-06 1.1E-10 95.3 12.6 230 594-867 16-289 (637)
456 PF06176 WaaY: Lipopolysacchar 98.2 1.8E-05 3.8E-10 85.2 13.9 138 589-737 31-182 (229)
457 COG0661 AarF Predicted unusual 98.2 4.7E-06 1E-10 99.2 9.7 137 595-737 131-313 (517)
458 PRK09902 hypothetical protein; 98.2 1.7E-05 3.6E-10 84.9 12.4 139 598-738 27-179 (216)
459 TIGR02172 Fb_sc_TIGR02172 Fibr 98.1 2.3E-05 5E-10 83.9 12.7 134 595-738 7-182 (226)
460 COG1718 RIO1 Serine/threonine 98.0 6.7E-05 1.5E-09 82.0 12.5 137 595-738 54-215 (268)
461 KOG1035 eIF-2alpha kinase GCN2 97.9 3.5E-05 7.6E-10 97.1 10.1 239 597-882 186-439 (1351)
462 cd05150 APH Aminoglycoside 3'- 97.9 0.00011 2.5E-09 78.0 12.3 135 596-738 5-193 (244)
463 PLN02876 acyl-CoA dehydrogenas 97.8 0.0002 4.4E-09 89.9 14.6 145 593-739 42-258 (822)
464 KOG1235 Predicted unusual prot 97.8 0.00013 2.9E-09 87.2 11.2 138 595-738 167-354 (538)
465 PF13095 FTA2: Kinetochore Sim 97.7 0.00034 7.3E-09 74.6 12.8 128 589-736 37-206 (207)
466 cd05155 APH_ChoK_like_1 Unchar 97.6 0.00029 6.2E-09 75.0 10.5 72 595-676 3-81 (235)
467 PF10707 YrbL-PhoP_reg: PhoP r 97.5 0.0017 3.6E-08 69.0 13.7 131 595-733 7-166 (199)
468 KOG1826 Ras GTPase activating 97.5 9.1E-06 2E-10 103.6 -4.0 253 587-881 1227-1496(2724)
469 COG2112 Predicted Ser/Thr prot 97.4 0.00067 1.4E-08 71.2 9.2 130 591-738 24-155 (201)
470 cd05157 ETNK_euk Ethanolamine 97.4 0.002 4.4E-08 67.9 12.7 137 594-738 3-201 (235)
471 PRK09550 mtnK methylthioribose 97.2 0.0062 1.3E-07 71.1 15.5 80 594-675 31-117 (401)
472 PRK10593 hypothetical protein; 97.1 0.0067 1.4E-07 67.7 13.3 77 593-676 18-100 (297)
473 PF12260 PIP49_C: Protein-kina 97.0 0.0019 4.2E-08 67.7 8.3 97 637-737 7-110 (188)
474 TIGR02721 ycfN_thiK thiamine k 97.0 0.002 4.3E-08 69.4 8.0 132 597-738 4-175 (256)
475 TIGR00938 thrB_alt homoserine 97.0 0.005 1.1E-07 68.3 11.3 141 590-737 23-216 (307)
476 cd05153 HomoserineK_II Homoser 96.8 0.011 2.5E-07 64.5 12.4 138 593-738 18-205 (296)
477 cd05156 ChoK_euk Choline Kinas 96.8 0.0078 1.7E-07 66.2 10.7 76 594-677 3-85 (302)
478 PRK05231 homoserine kinase; Pr 96.7 0.022 4.8E-07 63.2 13.9 31 708-738 187-217 (319)
479 KOG2268 Serine/threonine prote 96.5 0.0021 4.5E-08 73.0 3.8 136 591-737 94-250 (465)
480 cd05152 MPH2' Macrolide 2'-Pho 96.0 0.046 1E-06 60.5 11.2 30 709-738 186-216 (276)
481 TIGR02906 spore_CotS spore coa 95.9 0.11 2.5E-06 56.9 13.8 30 708-738 187-216 (313)
482 TIGR01767 MTRK 5-methylthiorib 95.8 0.059 1.3E-06 62.4 11.0 76 596-673 2-84 (370)
483 KOG2270 Serine/threonine prote 95.8 0.064 1.4E-06 62.2 11.0 141 593-737 148-312 (520)
484 COG3173 Predicted aminoglycosi 95.7 0.088 1.9E-06 60.0 12.1 140 591-739 27-229 (321)
485 PLN02236 choline kinase 95.5 0.12 2.5E-06 59.1 12.1 139 592-738 39-231 (344)
486 PLN02756 S-methyl-5-thioribose 95.1 0.19 4.2E-06 59.1 12.3 77 593-673 36-119 (418)
487 PF03881 Fructosamin_kin: Fruc 94.6 0.24 5.3E-06 55.6 11.1 76 591-674 19-97 (288)
488 PLN02421 phosphotransferase, a 94.5 0.21 4.6E-06 56.6 10.5 139 590-737 16-212 (330)
489 PRK12396 5-methylribose kinase 94.1 0.25 5.5E-06 58.0 10.2 78 594-673 34-117 (409)
490 TIGR02904 spore_ysxE spore coa 93.9 0.55 1.2E-05 52.4 12.1 30 709-738 197-226 (309)
491 KOG1093 Predicted protein kina 93.0 0.17 3.6E-06 60.9 6.2 163 635-883 28-200 (725)
492 PTZ00384 choline kinase; Provi 92.8 0.81 1.8E-05 53.4 11.6 29 708-737 227-255 (383)
493 PRK06148 hypothetical protein; 92.5 2 4.4E-05 56.1 15.7 30 708-737 203-235 (1013)
494 PRK11768 serine/threonine prot 92.2 1.4 3E-05 49.9 12.2 29 708-738 196-224 (325)
495 COG5072 ALK1 Serine/threonine 91.4 0.37 8.1E-06 56.1 6.4 73 660-738 297-370 (488)
496 PF07387 Seadorna_VP7: Seadorn 90.5 1 2.3E-05 49.6 8.4 115 600-735 73-189 (308)
497 PF02958 EcKinase: Ecdysteroid 89.6 1.9 4E-05 47.4 9.8 29 710-738 217-250 (294)
498 PTZ00296 choline kinase; Provi 85.5 7.3 0.00016 46.5 12.1 28 709-737 285-312 (442)
499 KOG1236 Predicted unusual prot 85.2 2.3 5.1E-05 50.4 7.5 61 664-725 320-381 (565)
500 KOG1033 eIF-2alpha kinase PEK/ 84.4 0.23 4.9E-06 59.4 -1.1 73 587-661 47-119 (516)
No 1
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=7.6e-69 Score=639.23 Aligned_cols=923 Identities=38% Similarity=0.487 Sum_probs=710.7
Q ss_pred hhhhhhhhhhhhhhhhhccc-----hhhhhhhHHHHhhhccccCchhhHHHHHHHHHHhhhcccCCcceeeeehhhhhhh
Q 001783 19 EILVVIRTKFDKAKEEVNSD-----LAVFAGDLVGILEKNAESHPEWQETIEDLLVLARSCAMTSPGEFWLQCEGIVQEL 93 (1013)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (1013)
+.+|.|+++|...++=+..| +++|++|.|-..|+.-+.-+|-|+.|++||+.+..|..+.+|+||+-|++|+|-|
T Consensus 242 wamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~L 321 (1205)
T KOG0606|consen 242 WAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLL 321 (1205)
T ss_pred HHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeec
Confidence 88999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred hhh---cccCCcchHHHHHHHHHHHHHhhHHHhhhhcccccccccccccccccccccccccCCCCcc---ccCCCcchHh
Q 001783 94 DDR---RQELPPGTLKQLYTRMLFILTRCTRLLQFHKESALAEDEHMFQFRQSRVLHSADKRIPQGT---LRDGKGSTIA 167 (1013)
Q Consensus 94 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 167 (1013)
|.- ||+++-+.+++.+.+|+||+|||+|.-||.+|.- ...|+...|||-- +.--|+++.. .+=-.-++.+
T Consensus 322 Dw~~llRqkaefvpql~~eddtsyfdTRs~Ryh~~~se~~-~~ees~~~~~qFs---scs~r~~kv~ss~~~l~~~~t~~ 397 (1205)
T KOG0606|consen 322 DWKSLLRQKAEFVPQLESEDDTSYFDTRSDRYHHFESEDT-GDEESSLEFRQFS---SCSPRFSKVYSSWESLAQLETAT 397 (1205)
T ss_pred ccchhhhhhccccccccccccchhhcccchheeeccccCC-ccccccccccccc---cccccccccccchhhhhcccccc
Confidence 999 9999999999999999999999999999999983 3344545677632 1112222211 1100011222
Q ss_pred hhhhhhcccccc---hhhhhcc--CccccccccCCcccCCCCCCCcccccChhhhhcccccccCCCCcccccccCCCccc
Q 001783 168 KASKAASSRKSY---SQEQHGL--DWKRDHAVKQGNILSPPGDDNAKSLESSAARDRMSSWKKLPSPVGKIMKESPTSKE 242 (1013)
Q Consensus 168 ~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (1013)
.+.+ +.-+++ ++--.+. +|++.- +.+..+-.+. +.+.-++. ++++.|+.++++--+.-+...+.+-
T Consensus 398 ~~~~--~~~~~~~~~~~~~~g~k~~~~~~s----p~~~kl~~st-~~ss~s~~--~~~s~~~~~~~~~s~~~~~~~~s~~ 468 (1205)
T KOG0606|consen 398 PREK--SSQSSQGEVSPSSAGQKDSWKSNS----PESSKLELST-ALSSVSPN--HPGSPSKSLTSAASTLRTALRTSSP 468 (1205)
T ss_pred cccc--ccccccccccCCccccccccccCC----hhhhhccccc-hhhhcccc--cCCCccccccchhhhhccccccCCC
Confidence 2222 222222 2211111 355432 2222222222 22222222 7999999999999999999999999
Q ss_pred cCCCccccccccccccCCcccccccCCCCCCchhhhhhccc---cccCcccccccCCCCccCCCCcceeeecccccCCCc
Q 001783 243 QNDGKVEPLKSSNIRRGLSEIDLTAKPSEFPPAAETLEHSS---KHQHKVSWGYWGDQQNISDDSSSIICRICEEEVPTS 319 (1013)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (1013)
++|+++.|+...--+ --.++-..+-|+.+...+-++ .--+.--|+.|++-+-+.-. .+.||||||.++|+.
T Consensus 469 ~~ds~~~~~~~~p~~-----~~~~~~~~~~~~~~~~~~~~s~~~~d~s~~~~~~r~~~~~v~~~-d~~i~~~~e~~~p~~ 542 (1205)
T KOG0606|consen 469 SEDSKIFPLRAPPPP-----SSYASEEPESPKPKFSVSPESGQPGDDSEALDRSRLWSKCVGTS-DSGICRICEAEGPRL 542 (1205)
T ss_pred CCCccccccCCCCCc-----cccccCCCCCCCcccccCCCCCCcccchhhhccccccccccccC-Ccccccccccccccc
Confidence 999999998633222 122233333343333221111 11223449999888877665 788999999999999
Q ss_pred ccccccchhhhhccccccCCccchhHHHHHHHHHHHHHHhhhcc-ccccccCCcccccccCCcccccccCCCCccccccc
Q 001783 320 HVEDHSKICAIADRCDQKGLSVNERLLRISETLEKMMESSVQKD-IHNVVVGSPDVAKVSNSSVTEESDVLSPKFSDWSR 398 (1013)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (1013)
|.|.|++||.++++|+-++++++.|+.+|.+-+++...|..-+- ... -|+|.-.-.|+.+ .-|+..| +-+.|+|
T Consensus 543 ~~e~~~~~~~~~~ks~~~s~e~~~~~~kv~ks~s~~alS~~i~s~~~~--~~~~l~s~lS~~~--~sS~p~S-rdsspsr 617 (1205)
T KOG0606|consen 543 HSENHSRICKHQAKSELNSIEVKSRLRKVNKSLSASALSLMINSSDTP--TGGPLCSPLSPRS--LSSNPSS-RDSSPSR 617 (1205)
T ss_pred cccCcchHHHhhhhcccCccccccchhhHHHHHHhhhcccccccccCC--cccccccccCCCC--CCCCccc-Ccccccc
Confidence 99999999999999999999999999999999999988865433 222 2455555555433 3455556 9999999
Q ss_pred cCccccccccccCCCcccccccCCCCCcccccccCCCCCCCCccCCCCCCCCCCCCCCCcchhHHHHHhccCCCCCCCCc
Q 001783 399 RGSEDMLDYVPEADNSVFMDDLKGLPSMACKTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQIDLLLAGKGALSEHDDF 478 (1013)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1013)
++|+.|+++.|.-+..-.-+.+. +-.|+-+.-.|-++ .-..-++.++.++-||+-+|+.+|-|++.-+++-..+--+.
T Consensus 618 d~s~~~~~~~ppI~i~~~~~~yG-ft~~airVy~Gd~d-~ytvhh~v~sv~egsPA~~agls~~DlIthvnge~v~gl~H 695 (1205)
T KOG0606|consen 618 DSSAAMLSLRPPITIHFSGKKYG-FTLRAIRVYMGDKD-VYTVHHSVGSVEEGSPAFEAGLSAGDLITHVNGEPVHGLVH 695 (1205)
T ss_pred ccchhhcCcCCceeeeccccccC-ceeeeEEEecCCcc-cceeeeeeeeecCCCCccccCCCccceeEeccCcccchhhH
Confidence 99999999999776665555544 66777777778887 55556889999999999999999999999999999999999
Q ss_pred cchhhHHH--Hhhh-cCCCCCCCCCCcchhhhhhceeeeeEecCCCccchhHHHH-HHHHHHHHHHHHHhhhhccCCCCc
Q 001783 479 PQMNELAD--IARC-VATTPLDDDSSIPYLLSFLEDLRVVIDRRKFDALTVETFG-ARIEKLIREKYLQLCELVTDDKVD 554 (1013)
Q Consensus 479 ~~~~~~~~--~~~~-~~~~P~~~~~~~~~~l~~~~~~r~~~d~rk~~s~t~e~~g-~ri~~l~R~ky~~Lce~v~~d~ld 554 (1013)
+||++|+. ++++ +.++|+. ..++-+.-.-..+...++.+|+-.++..+.++ .|+.+++|..|.+.|+.+..+...
T Consensus 696 ~ev~~Lll~~gn~v~~~ttple-nTSik~g~arr~~~k~~m~~R~kk~~~~E~~~~rr~~kLlr~~~~q~~~l~~~~~s~ 774 (1205)
T KOG0606|consen 696 TEVMELLLKSGNKVTLRTTPLE-NTSIKSGPARRDSYKAVMARRKKKALVPETFGIRRIEKLLRKISKQDCELLHTSRSF 774 (1205)
T ss_pred HHHHHHHHhcCCeeEEEeeccc-cchhhhhHHHHHHHHHHHhhcccccccccccccccHHHHHHHHHhhhhhhhcccccc
Confidence 99999887 7755 4566764 33454544444456666778999999999999 899999999999999987655432
Q ss_pred ccceeecCCCCCchhhhcccCCCCCCCCCCCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHH
Q 001783 555 ITSTVIEEDAPLEDDVVRSLRTSPIHPSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVE 634 (1013)
Q Consensus 555 ~ts~~Iee~~~lEee~l~sl~~sp~~P~k~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie 634 (1013)
......+..+..+.+...+..|.+.+...+++.+++.+-.|+++.++.+.-..+|...+.|+..+.........+
T Consensus 775 -----~ss~eS~pgdp~~sls~sP~sp~~yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~ 849 (1205)
T KOG0606|consen 775 -----LSSSESLPGDPTRSLSASPRSPTKYRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYE 849 (1205)
T ss_pred -----ccccccCCCCcccccccCCCCcccccCCCccceecccccCCCCcccccCCccccccccchhhhccchhhcccccc
Confidence 112222333446666666777776778889999999999999999999999889988999998877766666677
Q ss_pred HHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Q 001783 635 SILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRD 714 (1013)
Q Consensus 635 ~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRD 714 (1013)
....+..++-...+|.+++.+..|.....++|+|+|+.|++|...+++.+..+++-++.++..+..+++|||...++|||
T Consensus 850 s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~ 929 (1205)
T KOG0606|consen 850 SIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRD 929 (1205)
T ss_pred ccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhccc
Confidence 77888887777788999998888888889999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeecCCCcEEEeecC-CccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc
Q 001783 715 LKPDNLLIAHDGHIKLTDFG-LSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL 793 (1013)
Q Consensus 715 IKPeNILLd~dG~VKLiDFG-LAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~ 793 (1013)
++|.|+|+..+|+.+++||| +.+.+......+.+++.-.++...-........... ..-......+||+.|.|||.+.
T Consensus 930 ~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~t~~~laPe~~l 1008 (1205)
T KOG0606|consen 930 LKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSA-DEARRKHAVVGTPDYLAPEILL 1008 (1205)
T ss_pred ccccchhhcccCCcccCccccccccccccCcCCcccccccCcccccccccccccccc-chhhccccccCCCcccCCcccc
Confidence 99999999999999999999 666666666665544333333221111111111111 1223455679999999999999
Q ss_pred cCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHH
Q 001783 794 GTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1013)
Q Consensus 794 g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeE 873 (1013)
+..++..+|||++|++++|.++|.+||....+++++++|.+...+||..+...+.++++++..+|..+|.+|.+...+.+
T Consensus 1009 g~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e 1088 (1205)
T KOG0606|consen 1009 GRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAE 1088 (1205)
T ss_pred cccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998877889
Q ss_pred HHhCCCCCCCChhhHhhhcCCccCCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCcccccCCCCCCCCcchhhhhhhc
Q 001783 874 VKQHVFFKDINWDTLARQKAAFVPTSESALDTSYFTSRYSWNTTDENIYPASDFEDSSDADSLSGSSSCLSNRQEEVGDE 953 (1013)
Q Consensus 874 LLqHPFFk~Idw~~L~~~kppfvP~~~s~lDts~Fss~~s~~~~d~n~~~~~~~e~s~~~~s~sgs~s~~S~~q~e~~~e 953 (1013)
+..|+||+.++|+.+..++..|+|.+.+..|++||.+++.|...+++..-...+.+- ++...+..|..+ +.-...
T Consensus 1089 ~k~~~~~~~~~~~~l~~q~~~~~p~~~s~~dtS~~~~r~~~~~~~e~~sg~s~~~~~---~s~~~~~~~~~p--e~~~~~ 1163 (1205)
T KOG0606|consen 1089 VKGHPFFQDVDWENLALQKAEFVPQPESTQDTSYFESRFSEESQDETVSGSSSGSKL---DSPDESPECTTP--ELKPAM 1163 (1205)
T ss_pred cccCCccCCCCccccccccCccCCCCCCCCccchhhcccccccccccccCCCcccCc---cCccccccccCc--cccCCc
Confidence 999999999999999999999999999999999999999988766554433322221 111122222222 112234
Q ss_pred cCCCccccCCCCCccccccceeeeccccccccccccc
Q 001783 954 CGGLAEFESGSSVNYSFSNFSFKVGFPVFFVNFSLHL 990 (1013)
Q Consensus 954 ~~gl~~f~~~~sv~~~f~~f~f~~~~~~~~~~~~~~~ 990 (1013)
|+ +-.|.+|+|++-+++++.|++.-+
T Consensus 1164 ~~-----------~~sl~~~~~k~~s~l~s~~p~~~l 1189 (1205)
T KOG0606|consen 1164 CG-----------NLSLINFSFKNLSQLASINPDKLL 1189 (1205)
T ss_pred Cc-----------cccccccCccChhhccccChHhhc
Confidence 44 223999999999999999998643
No 2
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.3e-67 Score=597.37 Aligned_cols=389 Identities=43% Similarity=0.726 Sum_probs=309.5
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~ 663 (1013)
.+..+++|++++.||+|+||.||+|+.+.||.+||||+++|+.+...+++++++.|+++|...++|+||+||++|++.++
T Consensus 136 ~r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~ 215 (550)
T KOG0605|consen 136 TRLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEY 215 (550)
T ss_pred ccCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCe
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
+||||||++|||+..+|.+.+.|+++.+++|+++++.||+.||+.|+|||||||+|+|||..||+||+|||||+- ....
T Consensus 216 LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g-l~~~ 294 (550)
T KOG0605|consen 216 LYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTG-LDKK 294 (550)
T ss_pred eEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccch-hhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999963 2221
Q ss_pred C-CCC------CCCCccCcccCCCCCc-----ccc-------hhhhhhhhhccccccCCCCCCCchhhccCCCCccceee
Q 001783 744 T-DDL------SGPAVSGTTLLGDEEP-----QLT-------ASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWW 804 (1013)
Q Consensus 744 ~-ddl------s~p~~~gttl~gd~~~-----~lt-------~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIW 804 (1013)
. .+. ........ ...+.+ ..+ .......+....+.+|||.||||||+.+.+|+..||||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEA--KPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhcchhhhhhhhccC--CCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 1 110 00011000 000000 111 01111223345678999999999999999999999999
Q ss_pred chhHHHHHHHhCCCCCCCCChhHHHHhhhccC--CCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 805 SVGIILFELIVGIPPFNAEHPQQIFDNILNRK--IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 805 SLGVILYELLTGk~PF~g~~~~ei~qkIl~~~--~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
||||||||||.|.|||.+.++.+++++|++.. ..+|. ...++++++|||.+||+ ||.+|+|.++++||++||||++
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~-~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~ 450 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE-EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKG 450 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC-cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCcccc
Confidence 99999999999999999999999999999977 34443 24688999999999999 9999999889999999999999
Q ss_pred CChhhHhhhcCCccCCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCcccccCCCCCCCCcchhhhhhhccCCCccccC
Q 001783 883 INWDTLARQKAAFVPTSESALDTSYFTSRYSWNTTDENIYPASDFEDSSDADSLSGSSSCLSNRQEEVGDECGGLAEFES 962 (1013)
Q Consensus 883 Idw~~L~~~kppfvP~~~s~lDts~Fss~~s~~~~d~n~~~~~~~e~s~~~~s~sgs~s~~S~~q~e~~~e~~gl~~f~~ 962 (1013)
|+|+.+....+||+|.+.+.+|+.||+.. ++++... .....+..+..+..-...-+.-..
T Consensus 451 v~W~~l~~~~apfvP~v~~~~DT~yFddF-----~e~~~~~---------------~~~~~~~~~~k~~~~~~~~~~~~~ 510 (550)
T KOG0605|consen 451 VDWDHLREMPAPFVPQVNSELDTQYFDDF-----PEEDSMT---------------PTADKSGPSRKMLSMVDTNNSSKD 510 (550)
T ss_pred CCcchhhcCCCCCCCCCCCcccccccccC-----cccccCc---------------ccccccccchhhhhcccccCCccc
Confidence 99999999999999999999999999731 1111000 001111111111110011122234
Q ss_pred CCCCccccccceeeeccccccccccccccccCcccchh
Q 001783 963 GSSVNYSFSNFSFKVGFPVFFVNFSLHLFTNCLLNTIC 1000 (1013)
Q Consensus 963 ~~sv~~~f~~f~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1013)
..+++|+|.+|.+.++.+....| ....+...|+..
T Consensus 511 ~~FvgfTyk~~~~~~~~~~~~~~---~~~~~~~~~~~~ 545 (550)
T KOG0605|consen 511 INFVGFTYKNFDGLNKANSLLIN---GSEKSKKKFSTS 545 (550)
T ss_pred ccccceeeecccccccccccccc---cccccccccccc
Confidence 55899999999999999886655 233444444444
No 3
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-64 Score=550.37 Aligned_cols=300 Identities=49% Similarity=0.898 Sum_probs=278.0
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEE
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~Ly 665 (1013)
...++|+++++||+|+||+||+++.+.+++.||+|+++|..+......+++.+|+.||..++||+||++++.|++.+++|
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy 101 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY 101 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence 45689999999999999999999999999999999999999888888999999999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
||+||+.||+|+.+|++.+.|+|..+++|+++|+.||.|||++|||||||||+|||++.+||++|+|||||+....
T Consensus 102 lVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~---- 177 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK---- 177 (357)
T ss_pred EEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhccc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999995221
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
....+.++|||+.|||||++.+.+|+.++||||||+++|||++|.+||.+.+.
T Consensus 178 ---------------------------~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~ 230 (357)
T KOG0598|consen 178 ---------------------------DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV 230 (357)
T ss_pred ---------------------------CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH
Confidence 11234568999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC-CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCC
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESA 902 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~-~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~ 902 (1013)
..++++|...+.+ ..|..++.++++||+++|++||.+|+|. +++.+|.+||||++|+|+.+... .|||.|.....
T Consensus 231 ~~~~~~I~~~k~~--~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~~~ 308 (357)
T KOG0598|consen 231 KKMYDKILKGKLP--LPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPNVTGL 308 (357)
T ss_pred HHHHHHHhcCcCC--CCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCeecCCCCc
Confidence 9999999988743 3456699999999999999999999973 68999999999999999999876 58999999999
Q ss_pred CCCCCccccccCCCCC
Q 001783 903 LDTSYFTSRYSWNTTD 918 (1013)
Q Consensus 903 lDts~Fss~~s~~~~d 918 (1013)
.++++|+.++...+.+
T Consensus 309 ~~~~~Fd~eft~~~~~ 324 (357)
T KOG0598|consen 309 EDTSNFDNEFTSYTVD 324 (357)
T ss_pred cccccccHHHHhcccc
Confidence 9999999877665544
No 4
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-60 Score=506.22 Aligned_cols=288 Identities=41% Similarity=0.841 Sum_probs=270.0
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEE
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~Ly 665 (1013)
..+++|++++.||.|+||+|.+++++.+|.+||+|++++....+..++++..+|..+|+.+.||+++++++.|.+.+++|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
|||||++||.|+.++++.++|++..+++|++||+.||+|||+++||+|||||||||+|.+|++||+|||+|+..
T Consensus 121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v------ 194 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRV------ 194 (355)
T ss_pred EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEe------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999841
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
...+.+.||||.|+|||++..++|+.++|||||||++|||+.|.+||...++
T Consensus 195 ----------------------------~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 195 ----------------------------SGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred ----------------------------cCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 1124568999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCccC-CCC
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVP-TSE 900 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfvP-~~~ 900 (1013)
.+++++|+.++..|| ..++++++|||+++|+.|-.+|.|. ++..+|+.||||++++|..+..+ .+|+.| ...
T Consensus 247 ~~iY~KI~~~~v~fP---~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~pp~~~ 323 (355)
T KOG0616|consen 247 IQIYEKILEGKVKFP---SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEPPNIH 323 (355)
T ss_pred HHHHHHHHhCcccCC---cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCCCCcccc
Confidence 999999999998765 5799999999999999999999885 47899999999999999999876 478887 666
Q ss_pred CCCCCCCccc
Q 001783 901 SALDTSYFTS 910 (1013)
Q Consensus 901 s~lDts~Fss 910 (1013)
...|+++|+.
T Consensus 324 ~~gdtsnfd~ 333 (355)
T KOG0616|consen 324 GPGDTSNFDD 333 (355)
T ss_pred CCcccccccc
Confidence 6788888864
No 5
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-59 Score=536.62 Aligned_cols=295 Identities=40% Similarity=0.796 Sum_probs=272.3
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccc
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRE 662 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~ 662 (1013)
....+++|.++++||+|+||+|++|+.+.++++||||+++|..+...+.++..+.|..|+...+ ||+++.|+.+|++++
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 3667899999999999999999999999999999999999999999999999999999998875 999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 663 NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
++|+||||+.||++.. +...+.|++..+++|+++|+.||+|||++||||||||.+|||+|.+||+||+|||+++.++..
T Consensus 443 ~l~fvmey~~Ggdm~~-~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMH-HIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred eEEEEEEecCCCcEEE-EEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCC
Confidence 9999999999999443 344478999999999999999999999999999999999999999999999999999953211
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
...+.++||||.|||||++.+..|+.++|||||||+|||||.|..||.+
T Consensus 522 -------------------------------g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g 570 (694)
T KOG0694|consen 522 -------------------------------GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG 570 (694)
T ss_pred -------------------------------CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC
Confidence 1235689999999999999999999999999999999999999999999
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCccCC
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPT 898 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfvP~ 898 (1013)
++.++++..|++..+. +|..+|.++.+++++||.++|++|+|+ .++++|.+||||++|+|+.|..+ +|||+|.
T Consensus 571 ddEee~FdsI~~d~~~---yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~ 647 (694)
T KOG0694|consen 571 DDEEEVFDSIVNDEVR---YPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPT 647 (694)
T ss_pred CCHHHHHHHHhcCCCC---CCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcc
Confidence 9999999999998764 466899999999999999999999997 47999999999999999999876 6999999
Q ss_pred CCCCCCCCCcccccc
Q 001783 899 SESALDTSYFTSRYS 913 (1013)
Q Consensus 899 ~~s~lDts~Fss~~s 913 (1013)
..+..|.++|+.+|.
T Consensus 648 i~~~~D~snFd~eFt 662 (694)
T KOG0694|consen 648 IKGPEDVSNFDEEFT 662 (694)
T ss_pred cCChhhhcccchhhh
Confidence 999999999988664
No 6
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-58 Score=507.65 Aligned_cols=337 Identities=35% Similarity=0.631 Sum_probs=297.9
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
..+.|...++||+||||.||.|+.+.||+.||+|.+.|.++..+......++|..||.+++.++||.+-++|++++.+||
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 34679999999999999999999999999999999999888888888899999999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 667 VMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
||..|+||||..+|.+.+ .|++..+++|++||+.||++||+.+||+|||||+|||+|+.|||+|+|+|||....
T Consensus 263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~---- 338 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIP---- 338 (591)
T ss_pred EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecC----
Confidence 999999999999998876 79999999999999999999999999999999999999999999999999997311
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
.....+..+||.+|||||++.+..|+...|||||||+||||+.|+.||....
T Consensus 339 ----------------------------~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K 390 (591)
T KOG0986|consen 339 ----------------------------EGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK 390 (591)
T ss_pred ----------------------------CCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh
Confidence 1122344599999999999999999999999999999999999999997643
Q ss_pred h----hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCcc
Q 001783 825 P----QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFV 896 (1013)
Q Consensus 825 ~----~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfv 896 (1013)
. +++-+.++.... .+++.+|+++++|++.+|++||.+|+|. ++++++.+||||+++||..+... .|||+
T Consensus 391 eKvk~eEvdrr~~~~~~---ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfi 467 (591)
T KOG0986|consen 391 EKVKREEVDRRTLEDPE---EYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFI 467 (591)
T ss_pred hhhhHHHHHHHHhcchh---hcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCC
Confidence 3 344455554443 4568899999999999999999999996 58999999999999999999886 69999
Q ss_pred CCCCC-----CCCCCCccc--cccCCCCCCCCCCCCCCCCCcccccCCCCCCCCc-chhhhhhh-ccCC-CccccCCCCC
Q 001783 897 PTSES-----ALDTSYFTS--RYSWNTTDENIYPASDFEDSSDADSLSGSSSCLS-NRQEEVGD-ECGG-LAEFESGSSV 966 (1013)
Q Consensus 897 P~~~s-----~lDts~Fss--~~s~~~~d~n~~~~~~~e~s~~~~s~sgs~s~~S-~~q~e~~~-e~~g-l~~f~~~~sv 966 (1013)
|.+.. .+|...|+. ...++.+|+++|..+ .++|+| +||+||++ +|+. +|+|.+.++.
T Consensus 468 Pdp~aVyakDv~DIeqFs~VKGV~ld~~D~~fy~~F-------------~tg~vsipWQnE~~ET~~f~elnv~~~~~~~ 534 (591)
T KOG0986|consen 468 PDPGAVYAKDVLDIEQFSTVKGVKLDDTDTDFYKNF-------------ATGSVSIPWQNEMIETECFEELNVFGDDGAK 534 (591)
T ss_pred CCccccchhhhhhhhhcccccceecccccHHHHHhc-------------cCCcccchHHHHHHHhhhHHHhhcccccccc
Confidence 98855 688999986 567888888888877 466777 99999998 7888 9999888877
Q ss_pred ccccc
Q 001783 967 NYSFS 971 (1013)
Q Consensus 967 ~~~f~ 971 (1013)
+....
T Consensus 535 ~~d~~ 539 (591)
T KOG0986|consen 535 NPDLR 539 (591)
T ss_pred Ccchh
Confidence 76443
No 7
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-56 Score=505.84 Aligned_cols=285 Identities=38% Similarity=0.727 Sum_probs=256.7
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceE
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~L 664 (1013)
....||.+.+.||+|+|++|++|+++.+++.|||||+.|..+.+++.++.+..|..+|..| .||.|++||..|++...+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 4568999999999999999999999999999999999999988888899999999999999 899999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+|+||+++|+|.++|++.|.|++..+++|++||+.||+|||++|||||||||+|||++.+|++||+|||.|+.......
T Consensus 150 YFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~ 229 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQK 229 (604)
T ss_pred EEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985211100
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
....+. . .........+++||..|.+||+|.....++.+|||+||||||.|+.|.+||.+.+
T Consensus 230 -~~~~~~-------------~----~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N 291 (604)
T KOG0592|consen 230 -SQENPV-------------D----PNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN 291 (604)
T ss_pred -cccCcc-------------C----cccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc
Confidence 000000 0 0011122467999999999999999999999999999999999999999999999
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhhcCC
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAA 894 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~kpp 894 (1013)
+--++++|+...+.| |+++++.++|||+++|..||.+|+ |+++|++||||.+|+|+.+..+.||
T Consensus 292 eyliFqkI~~l~y~f---p~~fp~~a~dLv~KLLv~dp~~Rl---t~~qIk~HpFF~~Vdw~nlw~~~PP 355 (604)
T KOG0592|consen 292 EYLIFQKIQALDYEF---PEGFPEDARDLIKKLLVRDPSDRL---TSQQIKAHPFFEGVDWENLWQQTPP 355 (604)
T ss_pred HHHHHHHHHHhcccC---CCCCCHHHHHHHHHHHccCccccc---cHHHHhhCcccccCChhhhhhcCCC
Confidence 999999999988865 568999999999999999999999 8999999999999999999888654
No 8
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-56 Score=493.98 Aligned_cols=317 Identities=38% Similarity=0.684 Sum_probs=270.7
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
...++.|++++.||.|.-|+||+|+.+.++..+||||+.+..+..++...+...|.+||..++||++++||..|+.++..
T Consensus 73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~ 152 (459)
T KOG0610|consen 73 SLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYS 152 (459)
T ss_pred ccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecccee
Confidence 45567899999999999999999999999999999999999988888899999999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 665 YLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
|+|||||+||+|..+++++ +.|++..+++|+++++.||+|||-+|||+||||||||||.++|||.|+||.|+......
T Consensus 153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999999999876 56999999999999999999999999999999999999999999999999998753211
Q ss_pred CCCCCC--------CCCccC--------cccCCCCC---------cccchhhhhhhhhccccccCCCCCCCchhhccCCC
Q 001783 743 STDDLS--------GPAVSG--------TTLLGDEE---------PQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH 797 (1013)
Q Consensus 743 s~ddls--------~p~~~g--------ttl~gd~~---------~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~y 797 (1013)
.+-..+ .+...+ ........ ..++.........+..+++||-.|+|||++.|.++
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 110000 000000 00000000 00111111223456778999999999999999999
Q ss_pred CccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC-CCHHHHHh
Q 001783 798 GTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-GGASEVKQ 876 (1013)
Q Consensus 798 s~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~-~TAeELLq 876 (1013)
+.++|||+||+++||||.|..||.+.+..+++.+|+.....||..+ .++..++|||+++|.+||.+|+|+ .+|.||++
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC-cchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence 9999999999999999999999999999999999999999988766 788999999999999999999986 47999999
Q ss_pred CCCCCCCChhhHhhhcCCccCCCCCC
Q 001783 877 HVFFKDINWDTLARQKAAFVPTSESA 902 (1013)
Q Consensus 877 HPFFk~Idw~~L~~~kppfvP~~~s~ 902 (1013)
||||++++|..++..+||++|.+...
T Consensus 392 HpFF~gVnWaLir~~~PP~iP~~~d~ 417 (459)
T KOG0610|consen 392 HPFFEGVNWALIRCARPPEIPKPVDG 417 (459)
T ss_pred CccccCCChhheeccCCCcCCCcccc
Confidence 99999999998888899999987553
No 9
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-56 Score=531.81 Aligned_cols=294 Identities=41% Similarity=0.768 Sum_probs=268.7
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
+..-+||+++++||+|+||.|.+++++.+++.||||+++|-.+.+......|..|.++|...+.++|+.++++|++++++
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 44558999999999999999999999999999999999998887777778999999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|||||||+||||..++.+.+.+++..+++|+++|+.||.-||+.|+|||||||+|||||..|||||+|||.|-....+
T Consensus 151 YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d-- 228 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD-- 228 (1317)
T ss_pred EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987631100
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHHHHHHhCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIILFELIVGIPP 819 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLTGk~P 819 (1013)
| .-.....+|||.|++||+|.. ..|+..||||||||++||||.|..|
T Consensus 229 ---------G-------------------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TP 280 (1317)
T KOG0612|consen 229 ---------G-------------------TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETP 280 (1317)
T ss_pred ---------C-------------------cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCc
Confidence 0 112456799999999999963 4589999999999999999999999
Q ss_pred CCCCChhHHHHhhhcc--CCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhhcCCccC
Q 001783 820 FNAEHPQQIFDNILNR--KIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVP 897 (1013)
Q Consensus 820 F~g~~~~ei~qkIl~~--~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~kppfvP 897 (1013)
|+.++..++|.+|++. ...||.. ..+|.++++||.++|+ +|+.|+|.++++++..||||.+++|+.++...|||+|
T Consensus 281 FYadslveTY~KIm~hk~~l~FP~~-~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vP 358 (1317)
T KOG0612|consen 281 FYADSLVETYGKIMNHKESLSFPDE-TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVP 358 (1317)
T ss_pred chHHHHHHHHHHHhchhhhcCCCcc-cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCC
Confidence 9999999999999987 4555532 4599999999999999 7999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccc
Q 001783 898 TSESALDTSYFTS 910 (1013)
Q Consensus 898 ~~~s~lDts~Fss 910 (1013)
...+..||++|+.
T Consensus 359 evssd~DTsnFd~ 371 (1317)
T KOG0612|consen 359 EVSSDDDTSNFDV 371 (1317)
T ss_pred cCCCCCccccccc
Confidence 9999999999943
No 10
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-56 Score=477.89 Aligned_cols=302 Identities=40% Similarity=0.783 Sum_probs=281.0
Q ss_pred CCCCCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec
Q 001783 581 PSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC 660 (1013)
Q Consensus 581 P~k~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed 660 (1013)
+.+....+++|+.+++||+|.||+|.+|+.+.+++.||||+++|..+..++.+.+.+.|-++|+..+||++..|.+.|+.
T Consensus 160 ~~~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt 239 (516)
T KOG0690|consen 160 KRKNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT 239 (516)
T ss_pred cccceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc
Confidence 34556688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccc
Q 001783 661 RENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1013)
Q Consensus 661 ~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1013)
.+++|+||||++||.|+.++.+...+++..+++|-++|+.||.|||+++||+||||.+|+|++.+|||||+||||++.++
T Consensus 240 ~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 240 QDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred CceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcc
Confidence 99999999999999999999998999999999999999999999999999999999999999999999999999998532
Q ss_pred cCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001783 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 741 ~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
.. .....++||||.|+|||++....|+.++|||.+||+||||++|+.||
T Consensus 320 ~~-------------------------------g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPF 368 (516)
T KOG0690|consen 320 KY-------------------------------GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPF 368 (516)
T ss_pred cc-------------------------------cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcc
Confidence 11 22356799999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCC--CHHHHHhCCCCCCCChhhHhhh--cCCcc
Q 001783 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQ--KAAFV 896 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~--TAeELLqHPFFk~Idw~~L~~~--kppfv 896 (1013)
+..+...+++-|+.....| |..++++++.|+..+|.+||.+|+|.+ +|.||.+|+||.+++|..+.++ .|||.
T Consensus 369 yn~dh~kLFeLIl~ed~kF---Pr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfK 445 (516)
T KOG0690|consen 369 YNKDHEKLFELILMEDLKF---PRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFK 445 (516)
T ss_pred cccchhHHHHHHHhhhccC---CccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCC
Confidence 9999999999999988765 568999999999999999999999974 7999999999999999998876 48999
Q ss_pred CCCCCCCCCCCccccccCCC
Q 001783 897 PTSESALDTSYFTSRYSWNT 916 (1013)
Q Consensus 897 P~~~s~lDts~Fss~~s~~~ 916 (1013)
|...+..|++||+.+|..++
T Consensus 446 PqVtSetDTryFD~EFT~q~ 465 (516)
T KOG0690|consen 446 PQVTSETDTRYFDEEFTSQP 465 (516)
T ss_pred CCcccccchhhhhhhhhcce
Confidence 99999999999998776544
No 11
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-54 Score=477.04 Aligned_cols=263 Identities=35% Similarity=0.608 Sum_probs=234.1
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccH----HHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRK----NAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~----e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~ 663 (1013)
.+.|.+.+.||+|+||.|-+|..+.||+.||||++++...... .....+.+|++||++++|||||+++++|+..+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 3559999999999999999999999999999999988654431 233456799999999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC---CcEEEeecCCccccc
Q 001783 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD---GHIKLTDFGLSKVGL 740 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d---G~VKLiDFGLAk~~~ 740 (1013)
.||||||+.||+|++.+-.++.+.+...+.+++||+.||.|||++||+||||||+|||+..+ ..+||+|||+|++.
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~- 329 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS- 329 (475)
T ss_pred eEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcc-
Confidence 99999999999999999999999999999999999999999999999999999999999876 68999999999951
Q ss_pred cCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCC---CccceeechhHHHHHHHhCC
Q 001783 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH---GTTADWWSVGIILFELIVGI 817 (1013)
Q Consensus 741 ~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~y---s~ksDIWSLGVILYELLTGk 817 (1013)
......++.||||.|.|||++.+.++ ..++|||||||+||-+|+|.
T Consensus 330 -------------------------------g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~ 378 (475)
T KOG0615|consen 330 -------------------------------GEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGY 378 (475)
T ss_pred -------------------------------ccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccC
Confidence 01123467899999999999998663 45789999999999999999
Q ss_pred CCCCCCChhH-HHHhhhccCCCCC-CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCCh
Q 001783 818 PPFNAEHPQQ-IFDNILNRKIPWP-RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINW 885 (1013)
Q Consensus 818 ~PF~g~~~~e-i~qkIl~~~~~~p-~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw 885 (1013)
+||....... +.++|..+.+.+- ..+..+|+++.+||.+||..||++|| +++|+|+||||+.+.-
T Consensus 379 pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~---s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 379 PPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRP---SADEALNHPWFKDAPC 445 (475)
T ss_pred CCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCc---CHHHHhcChhhhcccc
Confidence 9998877666 8899999887764 55678999999999999999999999 9999999999997753
No 12
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-53 Score=485.75 Aligned_cols=319 Identities=44% Similarity=0.755 Sum_probs=271.3
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
.-|..++.||-|+||+|.+++...|...||+|.+.|.+...++++.++..|++||...++++||+||+.|++++++|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 34999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC-
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL- 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl- 747 (1013)
+|++||++..+|-+.+.|.|+.+++|++++.+|+++.|++|+|||||||+|||||.+|||||+|||||. ++.+..+.-
T Consensus 709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCT-GfRWTHdskY 787 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHDSKY 787 (1034)
T ss_pred eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccc-cceecccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 333322210
Q ss_pred --CCCC-----ccCcccCCCCCcccchhhh----hhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhC
Q 001783 748 --SGPA-----VSGTTLLGDEEPQLTASEH----QQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVG 816 (1013)
Q Consensus 748 --s~p~-----~~gttl~gd~~~~lt~s~~----~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG 816 (1013)
.+.+ +.-....++...-+...+. ...+-...+.+||+.|+|||+|...+|+..|||||.|||||||+.|
T Consensus 788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g 867 (1034)
T KOG0608|consen 788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVG 867 (1034)
T ss_pred ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhC
Confidence 0111 0000001111111111111 1122234567999999999999999999999999999999999999
Q ss_pred CCCCCCCChhHHHHhhhccCCCCCCC--CCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhhcCC
Q 001783 817 IPPFNAEHPQQIFDNILNRKIPWPRV--PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAA 894 (1013)
Q Consensus 817 k~PF~g~~~~ei~qkIl~~~~~~p~l--p~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~kpp 894 (1013)
++||-...+.++..++.+.... ..+ ..++|.++.+||.++++ +++.|+|.+.+++|+.||||++|+|..++.++++
T Consensus 868 ~~pf~~~tp~~tq~kv~nw~~~-l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkgIDfsslRkq~Ap 945 (1034)
T KOG0608|consen 868 QPPFLADTPGETQYKVINWRNF-LHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKGIDFSSLRKQRAP 945 (1034)
T ss_pred CCCccCCCCCcceeeeeehhhc-cccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCccccccchHhhhhccCC
Confidence 9999999988888887775432 222 35799999999999877 7999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCccc
Q 001783 895 FVPTSESALDTSYFTS 910 (1013)
Q Consensus 895 fvP~~~s~lDts~Fss 910 (1013)
|+|.+.-..|+++|+.
T Consensus 946 YIP~ItHptDTSNFdp 961 (1034)
T KOG0608|consen 946 YIPRITHPTDTSNFDP 961 (1034)
T ss_pred cCccccCCCccccCCc
Confidence 9999999999999975
No 13
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-53 Score=487.53 Aligned_cols=256 Identities=34% Similarity=0.639 Sum_probs=242.3
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
..|+..+.||+|||++||.+++..+|..||+|++.+..+......+.+.+|++|.+.|+|||||+++++|++.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 45999999999999999999999999999999999988888889999999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
|+|..++|..++++.+.++|.+++.|++||+.||.|||+++|||||||..||+++++.+|||+|||||....
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le-------- 169 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLE-------- 169 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeec--------
Confidence 999999999999998999999999999999999999999999999999999999999999999999997411
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
...++..+.||||.|+||||+...+++..+||||+||+||.||+|+|||...+..++
T Consensus 170 -----------------------~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vket 226 (592)
T KOG0575|consen 170 -----------------------YDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKET 226 (592)
T ss_pred -----------------------CcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHH
Confidence 112456689999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCC
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk 881 (1013)
+.+|....+.+| ..+|.++++||.+||+.||.+|| ++++||.|+||+
T Consensus 227 y~~Ik~~~Y~~P---~~ls~~A~dLI~~lL~~~P~~Rp---sl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 227 YNKIKLNEYSMP---SHLSAEAKDLIRKLLRPNPSERP---SLDEVLDHPFFK 273 (592)
T ss_pred HHHHHhcCcccc---cccCHHHHHHHHHHhcCCcccCC---CHHHHhcCHhhh
Confidence 999999988765 48999999999999999999999 999999999994
No 14
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.1e-50 Score=443.51 Aligned_cols=319 Identities=42% Similarity=0.760 Sum_probs=256.0
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||+||+|++..+++.||||++.+...........+.+|+.+|..++||||++++++|.+.+++||||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998765545556678889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
|||.||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++...........
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 160 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY 160 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence 99999999999988888999999999999999999999999999999999999999999999999998742111000000
Q ss_pred CCCccCcccCC---CCCcccc-----hhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001783 749 GPAVSGTTLLG---DEEPQLT-----ASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 749 ~p~~~gttl~g---d~~~~lt-----~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
. ......... ....... ..............+||+.|+|||++.+..++.++|||||||++|||++|.+||
T Consensus 161 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf 239 (364)
T cd05599 161 R-ILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPF 239 (364)
T ss_pred c-cccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCC
Confidence 0 000000000 0000000 000000111223468999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhhccCCCCCC-CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhhcCCccCCC
Q 001783 821 NAEHPQQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTS 899 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~~~p~-lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~kppfvP~~ 899 (1013)
...+..+.+..+......+.. ....+++++.+||.+||. +|.+|++..++.++++||||++++|+.+....++++|..
T Consensus 240 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~ 318 (364)
T cd05599 240 CSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVDWEHIRERPAPIIPEL 318 (364)
T ss_pred CCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCCHHHHhhcCCCCCCCC
Confidence 998888888887765433221 122578999999999997 999999655699999999999999999988888999988
Q ss_pred CCCCCCCCcc
Q 001783 900 ESALDTSYFT 909 (1013)
Q Consensus 900 ~s~lDts~Fs 909 (1013)
.+..|.++|.
T Consensus 319 ~~~~~~~~~~ 328 (364)
T cd05599 319 KSITDTSNFD 328 (364)
T ss_pred CCchhhhhcc
Confidence 8877777775
No 15
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-51 Score=448.22 Aligned_cols=259 Identities=32% Similarity=0.612 Sum_probs=235.4
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce-
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN- 663 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~- 663 (1013)
+...++.+.++.||+|+.|+||+|+|+.|++.+|+|++... .+....+.+.+|+++++.++|||||++|++|..+..
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCce
Confidence 34567899999999999999999999999999999999432 345667889999999999999999999999999995
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
++|+||||+||+|.+++.+.+.++|..+..++.+++.||.|||+ ++||||||||+|||++..|.|||||||.++.. .
T Consensus 153 isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~l-v- 230 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGIL-V- 230 (364)
T ss_pred EEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHh-h-
Confidence 99999999999999999999999999999999999999999995 99999999999999999999999999998731 0
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
+....+++||..|||||.+.+..|+.++||||||++++||.+|+.||..
T Consensus 231 -------------------------------nS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~ 279 (364)
T KOG0581|consen 231 -------------------------------NSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPP 279 (364)
T ss_pred -------------------------------hhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCC
Confidence 1134678999999999999999999999999999999999999999987
Q ss_pred C-----ChhHHHHhhhccCCCCCCCCCC-CCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 823 E-----HPQQIFDNILNRKIPWPRVPEE-MSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 823 ~-----~~~ei~qkIl~~~~~~p~lp~~-lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
. +..+++..|..+.. |.+|.. +|+++++||..||++||.+|+ ++.|+++|||++..
T Consensus 280 ~~~~~~~~~~Ll~~Iv~~pp--P~lP~~~fS~ef~~FV~~CL~Kdp~~R~---s~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 280 PNPPYLDIFELLCAIVDEPP--PRLPEGEFSPEFRSFVSCCLRKDPSERP---SAKQLLQHPFIKKF 341 (364)
T ss_pred cCCCCCCHHHHHHHHhcCCC--CCCCcccCCHHHHHHHHHHhcCCcccCC---CHHHHhcCHHHhhc
Confidence 4 67788888888654 567776 999999999999999999999 99999999999854
No 16
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=7e-50 Score=444.52 Aligned_cols=320 Identities=43% Similarity=0.796 Sum_probs=255.4
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||+||+|+++.+++.||||++.+...........+.+|+.++..++||||++++++|.+..++||||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47999999999999999999999999999999998765445556678899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...........
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 160 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY 160 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 99999999999988888999999999999999999999999999999999999999999999999999631110000000
Q ss_pred CCCccCc----ccCCC-----CCcccchhh-------hhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHH
Q 001783 749 GPAVSGT----TLLGD-----EEPQLTASE-------HQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFE 812 (1013)
Q Consensus 749 ~p~~~gt----tl~gd-----~~~~lt~s~-------~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYE 812 (1013)
.....+. ...+. ......... ...........+||+.|+|||++.+..++.++|||||||++||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 240 (377)
T cd05629 161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE 240 (377)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhh
Confidence 0000000 00000 000000000 0000011124689999999999999999999999999999999
Q ss_pred HHhCCCCCCCCChhHHHHhhhccCC--CCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhh
Q 001783 813 LIVGIPPFNAEHPQQIFDNILNRKI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLAR 890 (1013)
Q Consensus 813 LLTGk~PF~g~~~~ei~qkIl~~~~--~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~ 890 (1013)
|++|.+||.+.+..+.+..+..... .+|. ...++.++.+||.+||+ +|.+|++..++.++++||||++++|+.+..
T Consensus 241 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~~~~~~ 318 (377)
T cd05629 241 CLIGWPPFCSENSHETYRKIINWRETLYFPD-DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVDWDTIRQ 318 (377)
T ss_pred hhcCCCCCCCCCHHHHHHHHHccCCccCCCC-CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCCHHHHcc
Confidence 9999999999888888888775432 2221 12578999999999998 898888777999999999999999999988
Q ss_pred hcCCccCCCCCCCCCCCccc
Q 001783 891 QKAAFVPTSESALDTSYFTS 910 (1013)
Q Consensus 891 ~kppfvP~~~s~lDts~Fss 910 (1013)
..+|++|......+..+|..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~ 338 (377)
T cd05629 319 IRAPFIPQLKSITDTSYFPT 338 (377)
T ss_pred CCCCcccCCCCccccccCCc
Confidence 88999999888887777754
No 17
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.6e-49 Score=440.10 Aligned_cols=319 Identities=41% Similarity=0.737 Sum_probs=248.8
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||+||+|+++.+++.||||++.+...........+.+|+.++..++||||+++++.+.+...+||||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998765555556678889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
|||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+++...........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~ 160 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY 160 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence 99999999999988889999999999999999999999999999999999999999999999999998742110000000
Q ss_pred ---CCCccCc-ccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 749 ---GPAVSGT-TLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 749 ---~p~~~gt-tl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
....... .........................+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~ 240 (363)
T cd05628 161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240 (363)
T ss_pred ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence 0000000 000000000000000000112235689999999999999999999999999999999999999999999
Q ss_pred hhHHHHhhhccCC--CCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhhcCCccCCCCCC
Q 001783 825 PQQIFDNILNRKI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSESA 902 (1013)
Q Consensus 825 ~~ei~qkIl~~~~--~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~kppfvP~~~s~ 902 (1013)
..+.+.++..... .+|. ...+++++++||.+|++ +|.+|++..++++|++||||++++|+.+....++..+...+.
T Consensus 241 ~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~~~~~~~~~~~~~~~~~~~ 318 (363)
T cd05628 241 PQETYKKVMNWKETLIFPP-EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVDWEHIRERPAAIPIEIKSI 318 (363)
T ss_pred HHHHHHHHHcCcCcccCCC-cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCCHHHHHhCCCCCCccCCCc
Confidence 9888888876432 2332 12478999999999886 677776655999999999999999999977655444444444
Q ss_pred CCCCCcc
Q 001783 903 LDTSYFT 909 (1013)
Q Consensus 903 lDts~Fs 909 (1013)
.+++.|+
T Consensus 319 ~~~~~~~ 325 (363)
T cd05628 319 DDTSNFD 325 (363)
T ss_pred chhhccC
Confidence 4554443
No 18
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1e-49 Score=444.00 Aligned_cols=317 Identities=44% Similarity=0.740 Sum_probs=253.4
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
.|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.+++.++||||+++++.|.+.+++|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 59999999999999999999999999999999987655556667889999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|.............
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~ 161 (382)
T cd05625 82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161 (382)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence 99999999999888889999999999999999999999999999999999999999999999999986311000000000
Q ss_pred CCccCcccCCC------------------CCcccch-hhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHH
Q 001783 750 PAVSGTTLLGD------------------EEPQLTA-SEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIIL 810 (1013)
Q Consensus 750 p~~~gttl~gd------------------~~~~lt~-s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVIL 810 (1013)
.+...... ....... ...........+.+||+.|+|||++.+..|+.++|||||||++
T Consensus 162 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 162 ---SGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ---cccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 00000000 0000000 0000011122356899999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCChhHHHHhhhccCCCCCC-CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHh
Q 001783 811 FELIVGIPPFNAEHPQQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLA 889 (1013)
Q Consensus 811 YELLTGk~PF~g~~~~ei~qkIl~~~~~~p~-lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~ 889 (1013)
|||++|++||.+.+..+....+......... ....+++++.+||.+|+ .+|.+|++..+++++++||||+.++|....
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~~~~ 317 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTIDFSSDL 317 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcChHHHH
Confidence 9999999999998887777777654332211 12468999999999986 599999976679999999999999998754
Q ss_pred -hhcCCccCCCCCCCCCCCccc
Q 001783 890 -RQKAAFVPTSESALDTSYFTS 910 (1013)
Q Consensus 890 -~~kppfvP~~~s~lDts~Fss 910 (1013)
...+|+.|......|+++|+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~ 339 (382)
T cd05625 318 RQQSAPYIPKITHPTDTSNFDP 339 (382)
T ss_pred hcCCCCccCcCCCcchhhhcCC
Confidence 456788999888888888854
No 19
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5e-50 Score=429.62 Aligned_cols=284 Identities=41% Similarity=0.813 Sum_probs=251.8
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||+||+|.++.+++.||+|++...........+.+.+|+.+++.++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47999999999999999999999999999999998655444455677889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~-------- 152 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR-------- 152 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhcc--------
Confidence 999999999999988889999999999999999999999999999999999999999999999999987310
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.
T Consensus 153 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~ 206 (291)
T cd05612 153 --------------------------DRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI 206 (291)
T ss_pred --------------------------CCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 011235799999999999999999999999999999999999999999998888
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCC
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALD 904 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lD 904 (1013)
++.+......+ +..++..+++||++||+.||.+|++. .+++++++||||+.++|..+... .+++.|......+
T Consensus 207 ~~~i~~~~~~~---~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 283 (291)
T cd05612 207 YEKILAGKLEF---PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQRKLKPPIVPKVSHDGD 283 (291)
T ss_pred HHHHHhCCcCC---CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHhcCCCCCCEeCCCCCccc
Confidence 88888776543 45679999999999999999999953 26999999999999999987654 4677787777777
Q ss_pred CCCcc
Q 001783 905 TSYFT 909 (1013)
Q Consensus 905 ts~Fs 909 (1013)
+.+|+
T Consensus 284 ~~~~~ 288 (291)
T cd05612 284 TSNFD 288 (291)
T ss_pred ccccc
Confidence 77765
No 20
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-49 Score=434.70 Aligned_cols=289 Identities=40% Similarity=0.795 Sum_probs=252.1
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~ 663 (1013)
....+++|++.+.||+|+||+||+|+++.+++.||+|++++.........+.+.+|+.++..++||||+++++++.+.+.
T Consensus 13 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 92 (329)
T PTZ00263 13 SSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENR 92 (329)
T ss_pred CCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCE
Confidence 34457899999999999999999999999999999999987655445566788999999999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
+|+||||+.||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 93 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~--- 169 (329)
T PTZ00263 93 VYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP--- 169 (329)
T ss_pred EEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcC---
Confidence 99999999999999999988899999999999999999999999999999999999999999999999999987310
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus 170 -------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 218 (329)
T PTZ00263 170 -------------------------------DRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD 218 (329)
T ss_pred -------------------------------CCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC
Confidence 0012357999999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhhc--CCccCCC
Q 001783 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQK--AAFVPTS 899 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~k--ppfvP~~ 899 (1013)
+..+.+..+...... +|..++..+++||.+||+.||.+|++. .+++++++||||++.+|+.+.... +|+.+..
T Consensus 219 ~~~~~~~~i~~~~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~~~~~~~~~~~~~~ 295 (329)
T PTZ00263 219 TPFRIYEKILAGRLK---FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYARYYPAPIPVRV 295 (329)
T ss_pred CHHHHHHHHhcCCcC---CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCcCCCC
Confidence 888888888876654 455689999999999999999999963 458999999999999999887543 4455555
Q ss_pred CCCCCCCCcc
Q 001783 900 ESALDTSYFT 909 (1013)
Q Consensus 900 ~s~lDts~Fs 909 (1013)
....+..+|.
T Consensus 296 ~~~~~~~~~~ 305 (329)
T PTZ00263 296 KSPGDTSNFE 305 (329)
T ss_pred CCcccchhcc
Confidence 4555555553
No 21
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.2e-49 Score=433.79 Aligned_cols=284 Identities=42% Similarity=0.790 Sum_probs=249.3
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GG 674 (1013)
+.||+|+||+||+|+++.+|+.||||++++...........+.+|+.+++.++||||++++++|...+++|+||||++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999999999999999998765444556677889999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccC
Q 001783 675 DLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSG 754 (1013)
Q Consensus 675 SL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~g 754 (1013)
+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~------------ 148 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD------------ 148 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC------------
Confidence 99999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred cccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhc
Q 001783 755 TTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILN 834 (1013)
Q Consensus 755 ttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~ 834 (1013)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||...+....+..+..
T Consensus 149 -------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~ 209 (323)
T cd05571 149 -------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 209 (323)
T ss_pred -------------------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence 0112346799999999999999999999999999999999999999999888888888876
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCCccc
Q 001783 835 RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1013)
Q Consensus 835 ~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~Fss 910 (1013)
.... ++..+++++.+||.+||++||.+||+. .++.++++||||.+++|..+... .+++.|......++.+|+.
T Consensus 210 ~~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
T cd05571 210 EEIR---FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLEPPFKPQVTSETDTRYFDE 286 (323)
T ss_pred CCCC---CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence 6543 456799999999999999999999964 37999999999999999988754 4677888777777777765
Q ss_pred cc
Q 001783 911 RY 912 (1013)
Q Consensus 911 ~~ 912 (1013)
.+
T Consensus 287 ~~ 288 (323)
T cd05571 287 EF 288 (323)
T ss_pred cc
Confidence 43
No 22
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.2e-49 Score=439.96 Aligned_cols=317 Identities=43% Similarity=0.720 Sum_probs=248.0
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
.|++++.||+|+||+||+|+++.+++.||||++.+...........+.+|+.++..++||||+++++++.+.+++|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 59999999999999999999999999999999987665556667889999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC-
Q 001783 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS- 748 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls- 748 (1013)
||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+++...........
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~ 161 (381)
T cd05626 82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ 161 (381)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence 9999999999988888999999999999999999999999999999999999999999999999998631100000000
Q ss_pred -CCCccCcc-----c--------CCCCCcccch-hhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHH
Q 001783 749 -GPAVSGTT-----L--------LGDEEPQLTA-SEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFEL 813 (1013)
Q Consensus 749 -~p~~~gtt-----l--------~gd~~~~lt~-s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYEL 813 (1013)
+....... + .+.....+.. ...........+.+||+.|||||++.+..++.++|||||||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el 241 (381)
T cd05626 162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM 241 (381)
T ss_pred ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence 00000000 0 0000000000 0000001122457899999999999999999999999999999999
Q ss_pred HhCCCCCCCCChhHHHHhhhccCC--CCCCCCCCCCHHHHHHHHHhccCCc--CCcCCCCCHHHHHhCCCCCCCChhhHh
Q 001783 814 IVGIPPFNAEHPQQIFDNILNRKI--PWPRVPEEMSPEAHDLIDRFLTEDP--HQRLGSGGASEVKQHVFFKDINWDTLA 889 (1013)
Q Consensus 814 LTGk~PF~g~~~~ei~qkIl~~~~--~~p~lp~~lS~elkDLI~rMLqkDP--ekRPg~~TAeELLqHPFFk~Idw~~L~ 889 (1013)
++|.+||...+..+....+..... .+|. ...+++++.+||.+||+.++ ..|+ +++++++||||.+++|....
T Consensus 242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~dli~~ll~~~~~~~~R~---~~~~~l~hp~f~~~~~~~~~ 317 (381)
T cd05626 242 LVGQPPFLAPTPTETQLKVINWENTLHIPP-QVKLSPEAVDLITKLCCSAEERLGRN---GADDIKAHPFFSEVDFSSDI 317 (381)
T ss_pred HhCCCCCcCCCHHHHHHHHHccccccCCCC-CCCCCHHHHHHHHHHccCcccccCCC---CHHHHhcCcccCCCChhHHh
Confidence 999999998887777666664322 2221 23589999999999776544 3488 99999999999999998754
Q ss_pred h-hcCCccCCCCCCCCCCCccc
Q 001783 890 R-QKAAFVPTSESALDTSYFTS 910 (1013)
Q Consensus 890 ~-~kppfvP~~~s~lDts~Fss 910 (1013)
. ..+|+.|......++++|+.
T Consensus 318 ~~~~~~~~p~~~~~~~~~~~~~ 339 (381)
T cd05626 318 RTQPAPYVPKISHPMDTSNFDP 339 (381)
T ss_pred hcCCCCccCcCCCcchhhhcCC
Confidence 4 45788888877777777754
No 23
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=4.2e-49 Score=427.11 Aligned_cols=283 Identities=41% Similarity=0.825 Sum_probs=249.2
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCCCh
Q 001783 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1013)
Q Consensus 597 LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL 676 (1013)
||+|+||+||+|++..+++.||+|++++...........+.+|+.+|..++||||+++++++...+.+|+||||++||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999999999999999999876544555667888999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcc
Q 001783 677 YSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTT 756 (1013)
Q Consensus 677 ~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gtt 756 (1013)
.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-------------- 146 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD-------------- 146 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC--------------
Confidence 999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred cCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhccC
Q 001783 757 LLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRK 836 (1013)
Q Consensus 757 l~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~~~ 836 (1013)
.......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.++.+....
T Consensus 147 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~ 209 (312)
T cd05585 147 -----------------DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP 209 (312)
T ss_pred -----------------CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC
Confidence 011234579999999999999999999999999999999999999999988888888887765
Q ss_pred CCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCCcccccc
Q 001783 837 IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTSRYS 913 (1013)
Q Consensus 837 ~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~Fss~~s 913 (1013)
.. ++..+++++.+||.+||+.||.+||+..++.++++||||...+|..+... .+++.|......++++|+..+.
T Consensus 210 ~~---~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (312)
T cd05585 210 LR---FPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDEEFT 285 (312)
T ss_pred CC---CCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCccchhhcCcccc
Confidence 43 45678999999999999999999998778999999999999999877554 4677787777777777765443
No 24
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4.6e-49 Score=435.41 Aligned_cols=319 Identities=42% Similarity=0.758 Sum_probs=251.4
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||+||+|+++.+++.||||++++...........+.+|+.++..++||||+++++.|.+.+++||||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998765555556778899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
|||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+++...........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~ 160 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY 160 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence 99999999999988888999999999999999999999999999999999999999999999999998732111000000
Q ss_pred ----CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 749 ----GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 749 ----~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
........+.......................+||+.|+|||++.+..++.++|||||||++|||++|++||.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~ 240 (360)
T cd05627 161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240 (360)
T ss_pred cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence 0000000000000000000000001112235689999999999999999999999999999999999999999999
Q ss_pred hhHHHHhhhccCC--CCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhhcCCccCCCCCC
Q 001783 825 PQQIFDNILNRKI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSESA 902 (1013)
Q Consensus 825 ~~ei~qkIl~~~~--~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~kppfvP~~~s~ 902 (1013)
....+..+..... .+|. ...+++++++||.+|+. ||.+|++..+++++++||||++++|..+....++..+...+.
T Consensus 241 ~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~~~~~~~~~~~~~~~~~~~~ 318 (360)
T cd05627 241 PQETYRKVMNWKETLVFPP-EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGVDWGHIRERPAAIPIEIKSI 318 (360)
T ss_pred HHHHHHHHHcCCCceecCC-CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCCCHHHHhcCCCCCCccCCCc
Confidence 8888888876432 2222 12478999999999875 999999877899999999999999999977655444455555
Q ss_pred CCCCCcc
Q 001783 903 LDTSYFT 909 (1013)
Q Consensus 903 lDts~Fs 909 (1013)
.|.++|+
T Consensus 319 ~~~~~~~ 325 (360)
T cd05627 319 DDTSNFD 325 (360)
T ss_pred chhhhcC
Confidence 6666664
No 25
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-51 Score=447.71 Aligned_cols=301 Identities=37% Similarity=0.776 Sum_probs=274.8
Q ss_pred CCCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeecc
Q 001783 583 KDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCR 661 (1013)
Q Consensus 583 k~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~ 661 (1013)
...+...+|..+.+||+|+||+|.+|..+.+...||||++++..+.+.+.++..+.|.++|... +-|++++++.+|++-
T Consensus 343 ~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm 422 (683)
T KOG0696|consen 343 RDRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM 422 (683)
T ss_pred ccceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh
Confidence 3455678999999999999999999999999999999999999988888899999999999876 467999999999999
Q ss_pred ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
+.+|+||||++||+|..+|+..|.+.|..+.+|+++|+.||-+||++|||+||||.+|||++.+|||||+|||+++....
T Consensus 423 DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred hheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999984211
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
....++++||||.|+|||++..++|+.++||||+||+|||||.|++||.
T Consensus 503 -------------------------------~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFd 551 (683)
T KOG0696|consen 503 -------------------------------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 551 (683)
T ss_pred -------------------------------CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCC
Confidence 1223568999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCC--CHHHHHhCCCCCCCChhhHhhh--cCCccC
Q 001783 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQ--KAAFVP 897 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~--TAeELLqHPFFk~Idw~~L~~~--kppfvP 897 (1013)
+++..++++.|+..+..+ |..+|.++.+++..+|.+.|.+|+|.+ .-.+|..||||+.|+|+.++.. .|||.|
T Consensus 552 GeDE~elF~aI~ehnvsy---PKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkP 628 (683)
T KOG0696|consen 552 GEDEDELFQAIMEHNVSY---PKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKP 628 (683)
T ss_pred CCCHHHHHHHHHHccCcC---cccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCC
Confidence 999999999999988764 568999999999999999999999974 5578999999999999999876 599999
Q ss_pred CCCCCCCCCCccccccCCCC
Q 001783 898 TSESALDTSYFTSRYSWNTT 917 (1013)
Q Consensus 898 ~~~s~lDts~Fss~~s~~~~ 917 (1013)
.++.--+.++|+..|.-..+
T Consensus 629 k~k~~r~~eNFD~~Ft~~~~ 648 (683)
T KOG0696|consen 629 KIKCGRDAENFDKFFTREPT 648 (683)
T ss_pred ccccCCchhhhhHHHhcCCC
Confidence 99888888999876654443
No 26
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=8.5e-49 Score=435.10 Aligned_cols=321 Identities=43% Similarity=0.721 Sum_probs=252.2
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.+|..++||||+++++.|.+.+++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998755444455678889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
|||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|............
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~ 160 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence 99999999999988888999999999999999999999999999999999999999999999999998521100000000
Q ss_pred C-------CCccCcccCCCC----Ccccch-hhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhC
Q 001783 749 G-------PAVSGTTLLGDE----EPQLTA-SEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVG 816 (1013)
Q Consensus 749 ~-------p~~~gttl~gd~----~~~lt~-s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG 816 (1013)
. ............ ...+.. .............+||+.|||||++.+..++.++|||||||++|||++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G 240 (376)
T cd05598 161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 240 (376)
T ss_pred ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhC
Confidence 0 000000000000 000000 0000011122356899999999999999999999999999999999999
Q ss_pred CCCCCCCChhHHHHhhhccCCCCC-CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHh-hhcCC
Q 001783 817 IPPFNAEHPQQIFDNILNRKIPWP-RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLA-RQKAA 894 (1013)
Q Consensus 817 k~PF~g~~~~ei~qkIl~~~~~~p-~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~-~~kpp 894 (1013)
++||.+.+..+....+......+. .....+++++.+||.+|+ .+|.+|++..++.++++||||+.++|..+. ...++
T Consensus 241 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~~~~~~~~~~~~~ 319 (376)
T cd05598 241 QPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGIDFASLIRRQKAP 319 (376)
T ss_pred CCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCCCHHHHhhcCCCC
Confidence 999999888777776665432221 112468999999999987 499999987789999999999999999885 44678
Q ss_pred ccCCCCCCCCCCCccc
Q 001783 895 FVPTSESALDTSYFTS 910 (1013)
Q Consensus 895 fvP~~~s~lDts~Fss 910 (1013)
++|......++++|..
T Consensus 320 ~~~~~~~~~~~~~~~~ 335 (376)
T cd05598 320 YIPKITHPTDTSNFDP 335 (376)
T ss_pred CCCcCCCcchhhhcCC
Confidence 8888877777776653
No 27
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.1e-48 Score=427.00 Aligned_cols=284 Identities=44% Similarity=0.816 Sum_probs=250.9
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||.||+|++..+++.||||++++...........+.+|+.++..++||||+++++++...+++||||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46999999999999999999999999999999998765444455678889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||++||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~-------- 152 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIV-------- 152 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccc--------
Confidence 999999999999888889999999999999999999999999999999999999999999999999987310
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
......+||+.|+|||++.+..++.++|||||||++|||++|.+||...+..+.
T Consensus 153 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~ 206 (333)
T cd05600 153 --------------------------TYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET 206 (333)
T ss_pred --------------------------cccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH
Confidence 012346799999999999999999999999999999999999999999888888
Q ss_pred HHhhhccCCC--CCCCC---CCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhhcCCccCCCCCCC
Q 001783 829 FDNILNRKIP--WPRVP---EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSESAL 903 (1013)
Q Consensus 829 ~qkIl~~~~~--~p~lp---~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~kppfvP~~~s~l 903 (1013)
+..+...... .|... ..++.++.+||.+||..+|.+|| +++++++||||.+++|..+....++++|......
T Consensus 207 ~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~---s~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (333)
T cd05600 207 WENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFG---SLEDIKNHPFFKEVDWNELRELKPPFVPELESEI 283 (333)
T ss_pred HHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcC---CHHHHHhCcccCCCCHHHHhhCCCCCCCCCCCcc
Confidence 7777653321 12111 25689999999999999999999 9999999999999999999877889999887777
Q ss_pred CCCCcc
Q 001783 904 DTSYFT 909 (1013)
Q Consensus 904 Dts~Fs 909 (1013)
+..+|.
T Consensus 284 ~~~~~~ 289 (333)
T cd05600 284 DTGYFD 289 (333)
T ss_pred hhhhcc
Confidence 766664
No 28
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.1e-48 Score=427.14 Aligned_cols=315 Identities=48% Similarity=0.858 Sum_probs=254.8
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||+||+|++..+++.||||++++...........+.+|+.++..++||||+++++++.+.+++|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999999999999999998765545456678899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...........
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY 160 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence 99999999999988888999999999999999999999999999999999999999999999999998742111100000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
............ ..................+||+.|+|||++.+..++.++|||||||++|||++|..||...+....
T Consensus 161 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 161 -LNDSHNLLFRDN-VLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred -cccccccccccc-ccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 000000000000 000000000111223456899999999999999999999999999999999999999999888888
Q ss_pred HHhhhc--cCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCC-HHHHHhCCCCCCCChhhHhhhcCCccCCCCCCCCC
Q 001783 829 FDNILN--RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGG-ASEVKQHVFFKDINWDTLARQKAAFVPTSESALDT 905 (1013)
Q Consensus 829 ~qkIl~--~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~T-AeELLqHPFFk~Idw~~L~~~kppfvP~~~s~lDt 905 (1013)
+..+.. ....+|.. ..+++++.+||.+||. ||.+|+ + ++++++||||++++|+......++++|......++
T Consensus 239 ~~~i~~~~~~~~~p~~-~~~~~~~~~li~~ll~-dp~~R~---~s~~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (350)
T cd05573 239 YNKIINWKESLRFPPD-PPVSPEAIDLICRLLC-DPEDRL---GSFEEIKSHPFFKGIDWENLRETKPPFVPELSSPLDT 313 (350)
T ss_pred HHHHhccCCcccCCCC-CCCCHHHHHHHHHHcc-ChhhcC---CCHHHHhcCCCcCCCCHHHHhhCCCCcCCCCCCchhh
Confidence 888876 33333332 2379999999999998 999999 7 99999999999999999988888999988777777
Q ss_pred CCccc
Q 001783 906 SYFTS 910 (1013)
Q Consensus 906 s~Fss 910 (1013)
..|+.
T Consensus 314 ~~~~~ 318 (350)
T cd05573 314 SNFDD 318 (350)
T ss_pred hhcCC
Confidence 66653
No 29
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-48 Score=430.83 Aligned_cols=289 Identities=39% Similarity=0.784 Sum_probs=254.5
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEECCCC-CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTG-DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArdk~tg-k~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~ 662 (1013)
....+++|++++.||+|+||.||+|+++.++ ..||+|++.+.........+.+.+|+.++..++||||+++++++.+.+
T Consensus 25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~ 104 (340)
T PTZ00426 25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES 104 (340)
T ss_pred CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC
Confidence 4556789999999999999999999976655 689999998765545556678899999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 663 NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
.+|+||||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+++...
T Consensus 105 ~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~-- 182 (340)
T PTZ00426 105 YLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD-- 182 (340)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecC--
Confidence 999999999999999999988889999999999999999999999999999999999999999999999999987310
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
......+||+.|||||++.+..++.++|||||||++|||++|.+||.+
T Consensus 183 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 230 (340)
T PTZ00426 183 --------------------------------TRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYA 230 (340)
T ss_pred --------------------------------CCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCC
Confidence 001235799999999999999999999999999999999999999999
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCccCC
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPT 898 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfvP~ 898 (1013)
.+...++..+...... +|..+++.+.+||++||+.||.+|++. .+++++++||||.+++|..+... .+|++|.
T Consensus 231 ~~~~~~~~~i~~~~~~---~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~ 307 (340)
T PTZ00426 231 NEPLLIYQKILEGIIY---FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPK 307 (340)
T ss_pred CCHHHHHHHHhcCCCC---CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 9888888888876544 456789999999999999999999753 38999999999999999988755 4788888
Q ss_pred CCCCCCCCCcc
Q 001783 899 SESALDTSYFT 909 (1013)
Q Consensus 899 ~~s~lDts~Fs 909 (1013)
.....+.++|.
T Consensus 308 ~~~~~~~~~~~ 318 (340)
T PTZ00426 308 YKNVFDSSNFE 318 (340)
T ss_pred CCCCcchhhcC
Confidence 87777766664
No 30
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-49 Score=435.16 Aligned_cols=261 Identities=33% Similarity=0.626 Sum_probs=238.1
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEE
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~Ly 665 (1013)
..+.+|.+.+.||.|+||+||+|+++.++..||||.+.+..+ ..+..+.+..|+.||+.++|||||.+++++...+++|
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~ 85 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIY 85 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEE
Confidence 356889999999999999999999999999999999988764 4556688899999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC------CcEEEeecCCcccc
Q 001783 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD------GHIKLTDFGLSKVG 739 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d------G~VKLiDFGLAk~~ 739 (1013)
||||||+||||.++|++.+.+++..++.++.||+.||++||+++||||||||.||||+.. -.+||+|||+|+..
T Consensus 86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 999999999999999999999999999999999999999999999999999999999875 35899999999941
Q ss_pred ccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCC
Q 001783 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPP 819 (1013)
Q Consensus 740 ~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~P 819 (1013)
. .+....+.||+|.|||||++....|+.++|+||+|+|+|+|++|++|
T Consensus 166 ~--------------------------------~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~P 213 (429)
T KOG0595|consen 166 Q--------------------------------PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPP 213 (429)
T ss_pred C--------------------------------chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCC
Confidence 1 12234568999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 820 FNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 820 F~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
|...+..+++..+.......|.++..++....+|+..+|+.+|.+|. +..+-+.|++...
T Consensus 214 f~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~---~~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 214 FDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRI---SFEDFFDHPFLAA 273 (429)
T ss_pred ccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccC---chHHhhhhhhccc
Confidence 99999999999888877777777888999999999999999999999 8888888888754
No 31
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.6e-48 Score=414.51 Aligned_cols=278 Identities=34% Similarity=0.598 Sum_probs=234.9
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
.|++++.||+|+||+||+|.++.+|+.||+|++.+...........+.+|+.++..++|+||+++++++.+.+.+|+|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 38899999999999999999999999999999987654444445677899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 670 y~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|+++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~------ 154 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE------ 154 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC------
Confidence 99999999888643 3589999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
.......+||+.|||||++.+..++.++|||||||++|+|++|+.||...+...
T Consensus 155 --------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~ 208 (285)
T cd05631 155 --------------------------GETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV 208 (285)
T ss_pred --------------------------CCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch
Confidence 001123579999999999999999999999999999999999999998765433
Q ss_pred HHHhhhccC-CCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCccCCC
Q 001783 828 IFDNILNRK-IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTS 899 (1013)
Q Consensus 828 i~qkIl~~~-~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~ 899 (1013)
....+.... .....++..++.++.+||++||+.||.+||+. .+++++++||||.+++|+.+... +|||+|.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 285 (285)
T cd05631 209 KREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCPDP 285 (285)
T ss_pred hHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCCCC
Confidence 222222111 11123456789999999999999999999953 35999999999999999999886 68998863
No 32
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.9e-48 Score=423.23 Aligned_cols=286 Identities=39% Similarity=0.773 Sum_probs=249.6
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GG 674 (1013)
+.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+++.++||||+++++.+...+.+|+||||++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999999999999999998765545556678889999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccC
Q 001783 675 DLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSG 754 (1013)
Q Consensus 675 SL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~g 754 (1013)
+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~------------ 148 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD------------ 148 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc------------
Confidence 99999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred cccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhc
Q 001783 755 TTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILN 834 (1013)
Q Consensus 755 ttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~ 834 (1013)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....+..
T Consensus 149 -------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~ 209 (328)
T cd05593 149 -------------------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 209 (328)
T ss_pred -------------------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc
Confidence 0011245799999999999999999999999999999999999999998888888777766
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCCccc
Q 001783 835 RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1013)
Q Consensus 835 ~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~Fss 910 (1013)
.... +|..++.++.+||.+||++||.+|++. .++.++++||||.+++|..+... .+++.|...+..+..+|..
T Consensus 210 ~~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (328)
T cd05593 210 EDIK---FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDE 286 (328)
T ss_pred CCcc---CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCc
Confidence 5543 456789999999999999999999854 38999999999999999988654 4678888877778877776
Q ss_pred cccC
Q 001783 911 RYSW 914 (1013)
Q Consensus 911 ~~s~ 914 (1013)
.++.
T Consensus 287 ~~~~ 290 (328)
T cd05593 287 EFTA 290 (328)
T ss_pred cccc
Confidence 5443
No 33
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=8.4e-48 Score=419.97 Aligned_cols=284 Identities=41% Similarity=0.785 Sum_probs=248.7
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GG 674 (1013)
+.||+|+||.||+|+++.+|+.||+|++++...........+.+|+.+++.++||||++++++|...+.+|+||||++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999999999999999998765444556677889999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccC
Q 001783 675 DLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSG 754 (1013)
Q Consensus 675 SL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~g 754 (1013)
+|..++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~------------ 148 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------ 148 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC------------
Confidence 99999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred cccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhc
Q 001783 755 TTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILN 834 (1013)
Q Consensus 755 ttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~ 834 (1013)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+....+..+..
T Consensus 149 -------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~ 209 (323)
T cd05595 149 -------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 209 (323)
T ss_pred -------------------CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 0011245799999999999999999999999999999999999999998888888888776
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCCccc
Q 001783 835 RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1013)
Q Consensus 835 ~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~Fss 910 (1013)
.... +|..+++++.+||.+||++||.+|++. .++.++++||||.+++|..+... .+++.|......+..+|+.
T Consensus 210 ~~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
T cd05595 210 EEIR---FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 286 (323)
T ss_pred CCCC---CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCChhhhhhcCc
Confidence 6544 456789999999999999999999864 38999999999999999988764 3778888888888888765
Q ss_pred cc
Q 001783 911 RY 912 (1013)
Q Consensus 911 ~~ 912 (1013)
.+
T Consensus 287 ~~ 288 (323)
T cd05595 287 EF 288 (323)
T ss_pred cc
Confidence 43
No 34
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.4e-47 Score=417.27 Aligned_cols=287 Identities=36% Similarity=0.772 Sum_probs=247.5
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC-CeeEEEeeeeccceEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNP-FVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HP-NIVkL~e~fed~~~LyLVM 668 (1013)
+|++++.||+|+||.||+|+++.+++.||||++.+.........+.+..|..++..++|+ +|++++++|...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 589999999999999999999999999999999876544455667888999999999765 6888999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~------ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG------ 154 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC------
Confidence 99999999999988888999999999999999999999999999999999999999999999999998631000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
.......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.
T Consensus 155 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~ 209 (324)
T cd05587 155 -------------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL 209 (324)
T ss_pred -------------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence 0012345799999999999999999999999999999999999999999998888
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCC
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALD 904 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lD 904 (1013)
+..+...... ++..++.++.+||.+||++||.+|++. ...+++++||||+.++|..+... .+++.|......+
T Consensus 210 ~~~i~~~~~~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (324)
T cd05587 210 FQSIMEHNVS---YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERREIQPPFKPKVKGRRS 286 (324)
T ss_pred HHHHHcCCCC---CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCccCcCCCcch
Confidence 8888776543 456789999999999999999999964 24589999999999999988654 4567776655555
Q ss_pred CCCccc
Q 001783 905 TSYFTS 910 (1013)
Q Consensus 905 ts~Fss 910 (1013)
..+|+.
T Consensus 287 ~~~~~~ 292 (324)
T cd05587 287 AENFDK 292 (324)
T ss_pred hhhcCc
Confidence 555543
No 35
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.1e-48 Score=421.96 Aligned_cols=282 Identities=40% Similarity=0.795 Sum_probs=245.4
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
+.||+|+||+||+|+++.+++.||+|++++.........+.+..|..++..+ +||||++++++|.+.+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999999999999999999876544455567788899988876 699999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|..++.+.+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~----------- 149 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN----------- 149 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl 833 (1013)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+++..+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~ 209 (320)
T cd05590 150 --------------------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 209 (320)
T ss_pred --------------------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHh
Confidence 011224579999999999999999999999999999999999999999999989988888
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC---CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCCc
Q 001783 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS---GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYF 908 (1013)
Q Consensus 834 ~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~---~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~F 908 (1013)
..... .+..++.++.+||.+||++||.+|++. ++.+++++||||++++|..+... .++|.|...+..|.++|
T Consensus 210 ~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (320)
T cd05590 210 NDEVV---YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPRIKSREDVSNF 286 (320)
T ss_pred cCCCC---CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhc
Confidence 76543 355689999999999999999999943 22499999999999999988654 57888888777777777
Q ss_pred cc
Q 001783 909 TS 910 (1013)
Q Consensus 909 ss 910 (1013)
+.
T Consensus 287 ~~ 288 (320)
T cd05590 287 DP 288 (320)
T ss_pred Cc
Confidence 64
No 36
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.5e-47 Score=416.95 Aligned_cols=286 Identities=42% Similarity=0.789 Sum_probs=246.0
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHH---HhcCCCCeeEEEeeeeccceEEEE
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDIL---ISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL---~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
|++++.||+|+||+||+|++..+++.||||++++.........+.+.+|+.++ ..++||||+++++++...+++|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 78999999999999999999999999999999876544444556777777765 456799999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|||++||+|..++.. +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~----- 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF----- 154 (324)
T ss_pred EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC-----
Confidence 999999999988865 57999999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
.......+||+.|||||++.+..++.++|||||||++|+|++|+.||.+.+..+
T Consensus 155 --------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~ 208 (324)
T cd05589 155 --------------------------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE 208 (324)
T ss_pred --------------------------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH
Confidence 011234689999999999999999999999999999999999999999998888
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCC--CHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCC
Q 001783 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQ--KAAFVPTSESAL 903 (1013)
Q Consensus 828 i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~--TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~l 903 (1013)
.+..+...... .+..++..+.+||.+||+.||.+||+.+ ++.++++||||++++|..+... .+++.|......
T Consensus 209 ~~~~i~~~~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (324)
T cd05589 209 VFDSIVNDEVR---YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLARKIKPPFVPTIKGPE 285 (324)
T ss_pred HHHHHHhCCCC---CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHHHhCCCCcCccCCCCCcc
Confidence 88888776543 4567899999999999999999999753 7999999999999999887654 467888877767
Q ss_pred CCCCcccc
Q 001783 904 DTSYFTSR 911 (1013)
Q Consensus 904 Dts~Fss~ 911 (1013)
|.++|...
T Consensus 286 d~~~~~~~ 293 (324)
T cd05589 286 DVSNFDEE 293 (324)
T ss_pred hhhhcCcc
Confidence 76666543
No 37
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-48 Score=436.46 Aligned_cols=260 Identities=39% Similarity=0.707 Sum_probs=233.7
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccH--HHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccc
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRK--NAVESILAERDILISVR-NPFVVRFFYSFTCRE 662 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~--e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~ 662 (1013)
...+.|++.+.||+|+||+|++|++..++..||+|++.+...... ...+.+.+|+.+++.++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 345789999999999999999999999999999998877532211 34456778999999999 999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC-CcEEEeecCCcccccc
Q 001783 663 NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD-GHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d-G~VKLiDFGLAk~~~~ 741 (1013)
++|+|||||.||+|++++.+.+++.|..++.+++||+.||+|||++||+||||||+|||++.+ +++||+|||++....
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~- 172 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP- 172 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC-
Confidence 999999999999999999999999999999999999999999999999999999999999999 999999999997410
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC-C-CccceeechhHHHHHHHhCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG-H-GTTADWWSVGIILFELIVGIPP 819 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~-y-s~ksDIWSLGVILYELLTGk~P 819 (1013)
.......+.|||+.|+|||++.+.. | +.++||||+||+||.|++|..|
T Consensus 173 ------------------------------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~P 222 (370)
T KOG0583|consen 173 ------------------------------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLP 222 (370)
T ss_pred ------------------------------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCC
Confidence 0112345789999999999999987 8 5899999999999999999999
Q ss_pred CCCCChhHHHHhhhccCCCCCCCCCCC-CHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 820 FNAEHPQQIFDNILNRKIPWPRVPEEM-SPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 820 F~g~~~~ei~qkIl~~~~~~p~lp~~l-S~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
|...+...++..|....+.+| ..+ |+++++||.+||..||.+|+ ++.+|+.||||+.
T Consensus 223 F~d~~~~~l~~ki~~~~~~~p---~~~~S~~~~~Li~~mL~~~P~~R~---t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 223 FDDSNVPNLYRKIRKGEFKIP---SYLLSPEARSLIEKMLVPDPSTRI---TLLEILEHPWFQK 280 (370)
T ss_pred CCCccHHHHHHHHhcCCccCC---CCcCCHHHHHHHHHHcCCCcccCC---CHHHHhhChhhcc
Confidence 999999999999998887654 456 99999999999999999999 9999999999985
No 38
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.5e-47 Score=416.61 Aligned_cols=282 Identities=39% Similarity=0.774 Sum_probs=244.1
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
+.||+|+||+||+|+++.+++.||+|++++...........+..|..++..+ +||||++++++|...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 3699999999999999999999999999876554555667788899998865 799999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~----------- 149 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN----------- 149 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl 833 (1013)
.......+||+.|+|||++.+..++.++|||||||++|||++|++||...+..+.++.+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~ 209 (321)
T cd05591 150 --------------------GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESIL 209 (321)
T ss_pred --------------------CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 011224579999999999999999999999999999999999999999999999999888
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCC----CHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCC
Q 001783 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG----GASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSY 907 (1013)
Q Consensus 834 ~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~----TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~ 907 (1013)
..... .|..++.++.+||.+||++||.+|++.. +++++++||||..++|..+... .+++.|......+..+
T Consensus 210 ~~~~~---~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (321)
T cd05591 210 HDDVL---YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKPKIKTKRDVNN 286 (321)
T ss_pred cCCCC---CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCCCCCCCCcchhhh
Confidence 76643 3456899999999999999999999752 7999999999999999988664 3567777665555555
Q ss_pred ccc
Q 001783 908 FTS 910 (1013)
Q Consensus 908 Fss 910 (1013)
|.+
T Consensus 287 ~~~ 289 (321)
T cd05591 287 FDQ 289 (321)
T ss_pred cCC
Confidence 543
No 39
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.9e-47 Score=415.30 Aligned_cols=290 Identities=41% Similarity=0.757 Sum_probs=246.8
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|..++..++|+||+++++++.+.+++|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998754444455567888999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||++||+|.+++.+ .+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~---- 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG---- 156 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC----
Confidence 99999999999977 4679999999999999999999999999999999999999999999999999987310000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
.......+||+.|||||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 157 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 157 --------------------------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred --------------------------ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 001123579999999999976 4578899999999999999999999999
Q ss_pred CChhHHHHhhhccC--CCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhhcCCccCCCC
Q 001783 823 EHPQQIFDNILNRK--IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSE 900 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~--~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~kppfvP~~~ 900 (1013)
.+..+.+..+.... .++|.....++.++++||.+||+.++ +|++..+++++++||||++++|..+....++++|...
T Consensus 211 ~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~-~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~p~~~ 289 (331)
T cd05624 211 ESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRE-RRLGQNGIEDFKKHAFFEGIDWENIRNLEAPYIPDVS 289 (331)
T ss_pred CCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCch-hhcCCCCHHHHhcCCCcCCCCHHHHhhCCCCccCCCC
Confidence 88888888887643 33444445679999999999999654 6665669999999999999999999888888888876
Q ss_pred CCCCCCCcc
Q 001783 901 SALDTSYFT 909 (1013)
Q Consensus 901 s~lDts~Fs 909 (1013)
...+..+|+
T Consensus 290 ~~~~~~~~~ 298 (331)
T cd05624 290 SPSDTSNFD 298 (331)
T ss_pred CcchhhhcC
Confidence 665555553
No 40
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.4e-47 Score=415.24 Aligned_cols=284 Identities=36% Similarity=0.762 Sum_probs=245.1
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~LyLVM 668 (1013)
+|++++.||+|+||+||+|+++.+++.||+|++++...........+..|..++..+ +||+|+++++++.+.+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 589999999999999999999999999999999876544445556777888888777 5899999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||++||+|..++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++++||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~------ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD------ 154 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC------
Confidence 99999999999988888999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..++
T Consensus 155 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~ 209 (323)
T cd05616 155 -------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 209 (323)
T ss_pred -------------------------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH
Confidence 0012346799999999999999999999999999999999999999999998888
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCC
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALD 904 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lD 904 (1013)
+..+...... +|..++.++.+||.+||++||.+|++. ....++++||||+.++|..+... .+|+.|.... .|
T Consensus 210 ~~~i~~~~~~---~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 285 (323)
T cd05616 210 FQSIMEHNVA---YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQPPYKPKACG-RD 285 (323)
T ss_pred HHHHHhCCCC---CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCC-ch
Confidence 8888876654 456789999999999999999999964 35789999999999999998765 4677766432 34
Q ss_pred CCCc
Q 001783 905 TSYF 908 (1013)
Q Consensus 905 ts~F 908 (1013)
..+|
T Consensus 286 ~~~~ 289 (323)
T cd05616 286 AENF 289 (323)
T ss_pred hhhc
Confidence 4444
No 41
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=8.7e-47 Score=412.93 Aligned_cols=289 Identities=41% Similarity=0.773 Sum_probs=246.0
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||+||+++++.+++.||+|++.+...........+.+|+.++..++|+||+++++.+.+.+.+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999997655444455567888999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||++||+|.+++.+ .+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~---- 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG---- 156 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC----
Confidence 99999999999977 4679999999999999999999999999999999999999999999999999986311000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
.......+||+.|||||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 157 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 157 --------------------------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred --------------------------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 001123579999999999863 4578999999999999999999999999
Q ss_pred CChhHHHHhhhccCC--CCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhhcCCccCCCC
Q 001783 823 EHPQQIFDNILNRKI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSE 900 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~--~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~kppfvP~~~ 900 (1013)
.+..+.+..+..... ++|.....+++++++||++||+.++ +|++..+++++++||||.+++|+.+....++++|...
T Consensus 211 ~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~-~r~~r~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~ 289 (332)
T cd05623 211 ESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSRE-HRLGQNGIEDFKQHPFFTGIDWDNIRNCEAPYIPEVS 289 (332)
T ss_pred CCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChh-hhcCCCCHHHHhCCCCcCCCCHHHHhhCCCCccCCCC
Confidence 998888888876543 3444445789999999999998644 5555559999999999999999999888888888876
Q ss_pred CCCCCCCc
Q 001783 901 SALDTSYF 908 (1013)
Q Consensus 901 s~lDts~F 908 (1013)
+..+++.+
T Consensus 290 ~~~~~~~~ 297 (332)
T cd05623 290 SPTDTSNF 297 (332)
T ss_pred CCcccccC
Confidence 66655554
No 42
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.1e-47 Score=418.40 Aligned_cols=282 Identities=41% Similarity=0.795 Sum_probs=240.7
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc---CCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV---RNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 597 LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L---~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
||+|+||+||+|+++.+++.||+|++.+..............|..++... +||||++++..|.+...+|+||||++|
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999999999999999999875544444555667787887765 699999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|..++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~----------- 149 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD----------- 149 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC-----------
Confidence 999999988889999999999999999999999999999999999999999999999999998631000
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNI 832 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkI 832 (1013)
.......+||+.|||||++.+. .++.++|||||||++|+|++|..||.+.+..+.+..+
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i 209 (330)
T cd05586 150 --------------------NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNI 209 (330)
T ss_pred --------------------CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHH
Confidence 0112346799999999999764 5899999999999999999999999999888888888
Q ss_pred hccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC-CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCCcc
Q 001783 833 LNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFT 909 (1013)
Q Consensus 833 l~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~-~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~Fs 909 (1013)
......++. ..+++++.+||.+||++||.+||+. .++.++++||||++++|+.+... .+++.|......+.++|.
T Consensus 210 ~~~~~~~~~--~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (330)
T cd05586 210 AFGKVRFPK--NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQITPPFKPIVDSDEDVSNFD 287 (330)
T ss_pred HcCCCCCCC--ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCccCCCCCCcchhhcC
Confidence 776655442 3578999999999999999999965 47999999999999999988654 457777776666666665
Q ss_pred cc
Q 001783 910 SR 911 (1013)
Q Consensus 910 s~ 911 (1013)
..
T Consensus 288 ~~ 289 (330)
T cd05586 288 PE 289 (330)
T ss_pred cc
Confidence 43
No 43
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2e-47 Score=416.23 Aligned_cols=284 Identities=42% Similarity=0.781 Sum_probs=247.0
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GG 674 (1013)
+.||+|+||+||+|++..+|+.||+|++++...........+.+|..++..++||||++++++|...+.+|+||||++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999999999999999998765444555677889999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 675 DLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 675 SL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
+|..++.+.+.+++..++.++.||+.||+|||+ +||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~----------- 149 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD----------- 149 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC-----------
Confidence 999999888889999999999999999999997 89999999999999999999999999998731100
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl 833 (1013)
.......+||+.|||||++.+..++.++|||||||++|+|++|..||.+.+.......+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~ 209 (325)
T cd05594 150 --------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 209 (325)
T ss_pred --------------------CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh
Confidence 001123579999999999999999999999999999999999999999988888888777
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCCcc
Q 001783 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFT 909 (1013)
Q Consensus 834 ~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~Fs 909 (1013)
..... ++..+++++.+||.+||++||.+|++. .++.++++||||.++.|...... .+++.|......++.+|+
T Consensus 210 ~~~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T cd05594 210 MEEIR---FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFD 286 (325)
T ss_pred cCCCC---CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcC
Confidence 66544 456789999999999999999999854 38999999999999999988654 367777777777888886
Q ss_pred ccc
Q 001783 910 SRY 912 (1013)
Q Consensus 910 s~~ 912 (1013)
..+
T Consensus 287 ~~~ 289 (325)
T cd05594 287 EEF 289 (325)
T ss_pred chh
Confidence 543
No 44
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=8.5e-47 Score=413.42 Aligned_cols=290 Identities=43% Similarity=0.794 Sum_probs=246.8
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.++..++||||++++++|.+.+++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998755445555677889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||++||+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 156 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG---- 156 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC----
Confidence 99999999999976 4579999999999999999999999999999999999999999999999999986310000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
.......+||+.|||||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 157 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 157 --------------------------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred --------------------------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 001122479999999999974 4478899999999999999999999999
Q ss_pred CChhHHHHhhhccC--CCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhhcCCccCCCC
Q 001783 823 EHPQQIFDNILNRK--IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSE 900 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~--~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~kppfvP~~~ 900 (1013)
.+..+.+..+.... ..++.....++..+++||++||+. |.+|++..+++++++||||.+++|..+....++++|...
T Consensus 211 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~-~~~r~~r~~~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~ 289 (331)
T cd05597 211 ESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICS-PETRLGRNGLQDFKDHPFFEGIDWDNIRNSTAPYVPEVS 289 (331)
T ss_pred CCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccC-cccccCCCCHHHHhcCCCCCCCCHHHHhhCCCCccCcCC
Confidence 88888888877543 233334456899999999999985 556555559999999999999999999888888888887
Q ss_pred CCCCCCCcc
Q 001783 901 SALDTSYFT 909 (1013)
Q Consensus 901 s~lDts~Fs 909 (1013)
...+++.|+
T Consensus 290 ~~~~~~~~~ 298 (331)
T cd05597 290 SPTDTSNFD 298 (331)
T ss_pred CcchhhhcC
Confidence 777766664
No 45
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.4e-47 Score=414.10 Aligned_cols=284 Identities=40% Similarity=0.813 Sum_probs=242.2
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHH-HHHhcCCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERD-ILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~-IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
+.||+|+||+||+|+++.+|+.||+|++.+...........+..|.. +++.++||||+++++.+...+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999999999999999998755444444456666665 45779999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|..++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~----------- 149 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH----------- 149 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl 833 (1013)
.......+||+.|+|||++.+..++.++|||||||++|||++|.+||...+..+++..+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~ 209 (323)
T cd05575 150 --------------------SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL 209 (323)
T ss_pred --------------------CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHH
Confidence 011224579999999999999999999999999999999999999999998888888887
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC-CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCCccc
Q 001783 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1013)
Q Consensus 834 ~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~-~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~Fss 910 (1013)
..... ++..++..+.+||.+||+.||.+||+. ....++++||||..++|..+... .+|+.|......+...|+.
T Consensus 210 ~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
T cd05575 210 NKPLR---LKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLVNKKITPPFNPNVSGPMDLKHFDP 286 (323)
T ss_pred cCCCC---CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHHhhccCCCCcCCCCCCcchhhhcCc
Confidence 76543 455789999999999999999999954 24589999999999999988764 4677887776666666654
Q ss_pred cc
Q 001783 911 RY 912 (1013)
Q Consensus 911 ~~ 912 (1013)
.+
T Consensus 287 ~~ 288 (323)
T cd05575 287 EF 288 (323)
T ss_pred cc
Confidence 33
No 46
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.9e-47 Score=413.61 Aligned_cols=287 Identities=40% Similarity=0.738 Sum_probs=247.5
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++.+.||+|+||+||+|+++.+|+.||+|++++...........+.+|+.++..++||||+++++.+.+.+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46999999999999999999999999999999998765544556677889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||++||+|.+++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~---- 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK---- 156 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCC----
Confidence 999999999999876 679999999999999999999999999999999999999999999999999987310000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc------cCCCCccceeechhHHHHHHHhCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL------GTGHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~------g~~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
.......+||+.|+|||++. +..++.++|||||||++|||++|..||.
T Consensus 157 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 210 (330)
T cd05601 157 --------------------------MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFH 210 (330)
T ss_pred --------------------------ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCC
Confidence 00112357999999999997 4567899999999999999999999999
Q ss_pred CCChhHHHHhhhccCC--CCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhhcCCccCCC
Q 001783 822 AEHPQQIFDNILNRKI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTS 899 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~--~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~kppfvP~~ 899 (1013)
..+....+.+++.... .+|. ...+++++.+||.+||+ +|.+|| +++++++||||..++|..+....+++.|..
T Consensus 211 ~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~li~~ll~-~p~~R~---t~~~l~~h~~~~~~~~~~~~~~~~~~~~~~ 285 (330)
T cd05601 211 EGTSAKTYNNIMNFQRFLKFPE-DPKVSSDFLDLIQSLLC-GQKERL---GYEGLCCHPFFSKIDWNNIRNSLPPFVPTL 285 (330)
T ss_pred CCCHHHHHHHHHcCCCccCCCC-CCCCCHHHHHHHHHHcc-ChhhCC---CHHHHhCCCCcCCCCHHHHhhCCCCccCcC
Confidence 8888888888776432 2222 23578999999999998 999999 999999999999999999988788888887
Q ss_pred CCCCCCCCccc
Q 001783 900 ESALDTSYFTS 910 (1013)
Q Consensus 900 ~s~lDts~Fss 910 (1013)
....+..+|..
T Consensus 286 ~~~~~~~~~~~ 296 (330)
T cd05601 286 KSDDDTSNFDE 296 (330)
T ss_pred CCcchhhhcCC
Confidence 77666666643
No 47
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.8e-47 Score=412.83 Aligned_cols=282 Identities=41% Similarity=0.810 Sum_probs=242.3
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~-L~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
+.||+|+||+||+|++..+++.||+|++++.........+.+..|..++.. .+||||+++++++.....+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 369999999999999999999999999987554444455666777777765 4899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~----------- 149 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG----------- 149 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl 833 (1013)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+++..+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~ 209 (316)
T cd05592 150 --------------------EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSIL 209 (316)
T ss_pred --------------------CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 011234679999999999999999999999999999999999999999998888888876
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCCcccc
Q 001783 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTSR 911 (1013)
Q Consensus 834 ~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~Fss~ 911 (1013)
... +.++..++.++.+||.+||+.||.+||+ .+.++++||||..++|..+... .+++.|......+.++|+..
T Consensus 210 ~~~---~~~~~~~~~~~~~ll~~~l~~~P~~R~~--~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (316)
T cd05592 210 NDR---PHFPRWISKEAKDCLSKLFERDPTKRLG--VDGDIRQHPFFRGIDWERLEKREIPPPFKPKVKSPSDASNFDRE 284 (316)
T ss_pred cCC---CCCCCCCCHHHHHHHHHHccCCHHHcCC--ChHHHHcCcccCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcc
Confidence 644 3456678999999999999999999993 2468999999999999988654 46788888777787777654
Q ss_pred c
Q 001783 912 Y 912 (1013)
Q Consensus 912 ~ 912 (1013)
+
T Consensus 285 ~ 285 (316)
T cd05592 285 F 285 (316)
T ss_pred c
Confidence 4
No 48
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-49 Score=445.50 Aligned_cols=292 Identities=36% Similarity=0.729 Sum_probs=272.3
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEE
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~Ly 665 (1013)
..+.+++++..||-||||.|=+++.......+|+|+++|..+....+.+++..|.+||..+++|+||+||-.|.+..++|
T Consensus 417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY 496 (732)
T KOG0614|consen 417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY 496 (732)
T ss_pred cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence 35678999999999999999999987766679999999999888899999999999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
|+||-|-||.|+..++..+.|++..+++|++.++.|++|||++|||+|||||+|+|++.+|.+||.|||+|+..
T Consensus 497 mLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki------ 570 (732)
T KOG0614|consen 497 MLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKI------ 570 (732)
T ss_pred hhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHh------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999841
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
..+.++.++||||.|.|||++.+++++.++|.||||+++||||+|.|||.+.++
T Consensus 571 --------------------------~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp 624 (732)
T KOG0614|consen 571 --------------------------GSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP 624 (732)
T ss_pred --------------------------ccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Confidence 223456789999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCC--CCCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCC
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLG--SGGASEVKQHVFFKDINWDTLARQ--KAAFVPTSES 901 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg--~~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s 901 (1013)
..+|..|+++-- .-.+|..++..+.+||+++...+|.+|+| .+++.+|.+|-||.+.||+.+..+ .||++|...+
T Consensus 625 mktYn~ILkGid-~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~ 703 (732)
T KOG0614|consen 625 MKTYNLILKGID-KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVAN 703 (732)
T ss_pred HHHHHHHHhhhh-hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCC
Confidence 999999998643 33567889999999999999999999999 479999999999999999999876 6899999999
Q ss_pred CCCCCCccc
Q 001783 902 ALDTSYFTS 910 (1013)
Q Consensus 902 ~lDts~Fss 910 (1013)
+.|++||+.
T Consensus 704 ptD~s~Fd~ 712 (732)
T KOG0614|consen 704 PTDVSNFDN 712 (732)
T ss_pred cccchhccC
Confidence 999999975
No 49
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=8.2e-47 Score=421.44 Aligned_cols=289 Identities=41% Similarity=0.722 Sum_probs=244.6
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEE
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~Ly 665 (1013)
...++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.+++.++||||+++++++.+...+|
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34578999999999999999999999999999999998755444455567789999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
+||||++||+|.+++.+ ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 120 lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~--- 195 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN--- 195 (370)
T ss_pred EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC---
Confidence 99999999999999876 46899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC----CCCccceeechhHHHHHHHhCCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT----GHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~----~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
........+||+.|||||++.+. .++.++|||||||++|||++|.+||.
T Consensus 196 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~ 248 (370)
T cd05596 196 ---------------------------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 248 (370)
T ss_pred ---------------------------CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcC
Confidence 00012245799999999999764 37899999999999999999999999
Q ss_pred CCChhHHHHhhhccCCC--CCCCCCCCCHHHHHHHHHhccCCcCC--cCCCCCHHHHHhCCCCCCCChhhH--hhhcCCc
Q 001783 822 AEHPQQIFDNILNRKIP--WPRVPEEMSPEAHDLIDRFLTEDPHQ--RLGSGGASEVKQHVFFKDINWDTL--ARQKAAF 895 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~~--~p~lp~~lS~elkDLI~rMLqkDPek--RPg~~TAeELLqHPFFk~Idw~~L--~~~kppf 895 (1013)
+.+....+.++...... +|. ...+|.++.+||.+||+.+|.+ |+ +++++++||||++.+|... ....+++
T Consensus 249 ~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~---s~~ell~h~~~~~~~~~~~~~~~~~~~~ 324 (370)
T cd05596 249 ADSLVGTYSKIMDHKNSLTFPD-DIEISKQAKDLICAFLTDREVRLGRN---GVDEIKSHPFFKNDQWTFDNIRETVAPV 324 (370)
T ss_pred CCCHHHHHHHHHcCCCcCCCCC-cCCCCHHHHHHHHHHccChhhccCCC---CHHHHhcCcccCCCChhhHHhcCCCcCc
Confidence 99988888888765432 222 1257999999999999998877 88 9999999999999888644 3445788
Q ss_pred cCCCCCCCCCCCcc
Q 001783 896 VPTSESALDTSYFT 909 (1013)
Q Consensus 896 vP~~~s~lDts~Fs 909 (1013)
+|......++.+|+
T Consensus 325 ~p~~~~~~~~~~~~ 338 (370)
T cd05596 325 VPELSSDIDTSNFD 338 (370)
T ss_pred cCcCCCcchhhhcC
Confidence 88877767666664
No 50
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.1e-47 Score=414.24 Aligned_cols=283 Identities=36% Similarity=0.729 Sum_probs=237.5
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
+.||+|+||+||+|+++.+++.||+|++++...........+..|..++..+ +||||++++++|.+.+.+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999999999999999999876554555667788999999888 799999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|..++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~----------- 149 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP----------- 149 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC---------C
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE---------H 824 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~---------~ 824 (1013)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||... .
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~ 209 (329)
T cd05588 150 --------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNT 209 (329)
T ss_pred --------------------CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccc
Confidence 01123468999999999999999999999999999999999999999631 1
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC---CCHHHHHhCCCCCCCChhhHhhh--cCCccCCC
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS---GGASEVKQHVFFKDINWDTLARQ--KAAFVPTS 899 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~---~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~ 899 (1013)
....++.+..... .+|..++.++.+||.+||+.||.+|++. .+++++++||||.+++|..+... .+++.|..
T Consensus 210 ~~~~~~~~~~~~~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~~~~~~~~~~~ 286 (329)
T cd05588 210 EDYLFQVILEKQI---RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQVLPPYKPNI 286 (329)
T ss_pred hHHHHHHHHcCCC---CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhCCCCCCccccC
Confidence 2224444554443 3566789999999999999999999954 25899999999999999988654 35666666
Q ss_pred CCCCCCCCcccc
Q 001783 900 ESALDTSYFTSR 911 (1013)
Q Consensus 900 ~s~lDts~Fss~ 911 (1013)
....+..+|...
T Consensus 287 ~~~~~~~~~~~~ 298 (329)
T cd05588 287 ESDRDLDNFDPQ 298 (329)
T ss_pred CCcchhhhcCCc
Confidence 555555555543
No 51
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=8.9e-47 Score=410.76 Aligned_cols=279 Identities=38% Similarity=0.770 Sum_probs=239.5
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~-L~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
+.||+|+||.||+|+++.+|+.||+|++++..............|..++.. ++||||++++++|.+.+++|+||||+.|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 469999999999999999999999999987543333445667778888875 4899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|..++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----------- 149 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG----------- 149 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998631000
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl 833 (1013)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..++++.+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~ 209 (316)
T cd05620 150 --------------------DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIR 209 (316)
T ss_pred --------------------CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 011234679999999999999999999999999999999999999999988888888776
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCH-HHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCCccc
Q 001783 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGA-SEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1013)
Q Consensus 834 ~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TA-eELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~Fss 910 (1013)
... +.++..++.++.+||.+||+.||.+|+ ++ +++++||||+.++|..+... .+++.|......+.++|..
T Consensus 210 ~~~---~~~~~~~~~~~~~li~~~l~~dP~~R~---~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (316)
T cd05620 210 VDT---PHYPRWITKESKDILEKLFERDPTRRL---GVVGNIRGHPFFKTINWTALEKRELDPPFKPKVKSPSDYSNFDR 283 (316)
T ss_pred hCC---CCCCCCCCHHHHHHHHHHccCCHHHcC---CChHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence 554 344567899999999999999999999 65 68999999999999987654 4677777776666666654
No 52
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=8e-47 Score=411.52 Aligned_cols=283 Identities=38% Similarity=0.761 Sum_probs=242.0
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHH-HHhcCCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDI-LISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~I-L~~L~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
+.||+|+||+||+|+++.+|+.||+|++.+...........+..|..+ ++.++||||+++++.+...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 469999999999999999999999999986544334444566666654 6779999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|..++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~----------- 149 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ----------- 149 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl 833 (1013)
.......+||+.|||||++.+..++.++|||||||++|+|++|.+||...+..+++..+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~ 209 (325)
T cd05604 150 --------------------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNIL 209 (325)
T ss_pred --------------------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHH
Confidence 001234679999999999999999999999999999999999999999998888888887
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC-CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCCccc
Q 001783 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1013)
Q Consensus 834 ~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~-~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~Fss 910 (1013)
..... .+...+..+.++|++||+.||.+||+. .++.++++||||..++|..+... .+++.|......+.++|+.
T Consensus 210 ~~~~~---~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T cd05604 210 HKPLV---LRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQKKIPPPFNPNVEGPDDISNFDA 286 (325)
T ss_pred cCCcc---CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCC
Confidence 76543 345689999999999999999999965 36789999999999999988764 4577777766666766654
Q ss_pred c
Q 001783 911 R 911 (1013)
Q Consensus 911 ~ 911 (1013)
.
T Consensus 287 ~ 287 (325)
T cd05604 287 V 287 (325)
T ss_pred c
Confidence 3
No 53
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8.8e-47 Score=411.30 Aligned_cols=281 Identities=39% Similarity=0.769 Sum_probs=243.0
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~-L~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
+.||+|+||+||+|++..+++.||||++++..............|..++.. ++||||+++++++.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 469999999999999999999999999987543333445667778888876 5899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|..++.....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~----------- 149 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG----------- 149 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC-----------
Confidence 999999988788999999999999999999999999999999999999999999999999998731000
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl 833 (1013)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..++++.+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~ 209 (316)
T cd05619 150 --------------------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR 209 (316)
T ss_pred --------------------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 001224579999999999999999999999999999999999999999988888887776
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHH-HHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCCccc
Q 001783 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGAS-EVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1013)
Q Consensus 834 ~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAe-ELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~Fss 910 (1013)
.... .++..++.++.+||.+||+.||.+|| ++. ++++||||+.++|..+... .+++.|......+.++|+.
T Consensus 210 ~~~~---~~~~~~~~~~~~li~~~l~~~P~~R~---~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (316)
T cd05619 210 MDNP---CYPRWLTREAKDILVKLFVREPERRL---GVKGDIRQHPFFREIDWSALEEREIEPPFKPKVKSANDCSNFDK 283 (316)
T ss_pred hCCC---CCCccCCHHHHHHHHHHhccCHhhcC---CChHHHHcCcccCCCCHHHHHhCCCCCCcCCCCCCccchhhcCh
Confidence 5443 34567899999999999999999999 675 9999999999999988654 5788999888888888876
Q ss_pred cc
Q 001783 911 RY 912 (1013)
Q Consensus 911 ~~ 912 (1013)
.+
T Consensus 284 ~~ 285 (316)
T cd05619 284 EF 285 (316)
T ss_pred hh
Confidence 44
No 54
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.2e-46 Score=408.86 Aligned_cols=276 Identities=37% Similarity=0.790 Sum_probs=241.2
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccceEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~LyLVM 668 (1013)
+|++.+.||+|+||+||+|+++.+|+.||||++.+.........+.+..|..++..+. |++|+++++++.+.+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4889999999999999999999999999999998765444555677888999998876 577888999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~------ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD------ 154 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC------
Confidence 99999999999988888999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
.......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+...+
T Consensus 155 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~ 209 (323)
T cd05615 155 -------------------------GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 209 (323)
T ss_pred -------------------------CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence 0012345799999999999999999999999999999999999999999988888
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCC--CHHHHHhCCCCCCCChhhHhhh--cCCccCCC
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQ--KAAFVPTS 899 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~--TAeELLqHPFFk~Idw~~L~~~--kppfvP~~ 899 (1013)
++.+...... .|..++.++.+||.+||++||.+|++.. ..+++++||||..++|..+... .+|+.|..
T Consensus 210 ~~~i~~~~~~---~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~ 281 (323)
T cd05615 210 FQSIMEHNVS---YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENREIQPPFKPKV 281 (323)
T ss_pred HHHHHhCCCC---CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcCCCCcCccCcc
Confidence 8888876654 4567899999999999999999999653 5789999999999999988765 46777654
No 55
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.5e-46 Score=419.93 Aligned_cols=292 Identities=44% Similarity=0.782 Sum_probs=245.7
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
....++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+++.++||||+++++.+.+..++
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 44568899999999999999999999999999999999875544445556788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+|||||+||+|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+++.....
T Consensus 119 ~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~-- 195 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE-- 195 (371)
T ss_pred EEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC--
Confidence 999999999999999876 45899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC----CCccceeechhHHHHHHHhCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG----HGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~----ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
........+||+.|||||++.+.. ++.++|||||||++|||++|.+||
T Consensus 196 ----------------------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf 247 (371)
T cd05622 196 ----------------------------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 247 (371)
T ss_pred ----------------------------CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCC
Confidence 000123468999999999997643 789999999999999999999999
Q ss_pred CCCChhHHHHhhhccCC--CCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCCh--hhHhhhcCCcc
Q 001783 821 NAEHPQQIFDNILNRKI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINW--DTLARQKAAFV 896 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~--~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw--~~L~~~kppfv 896 (1013)
.+.+....+..++.... .+|. ...++..+++||.+||. +|..|++..+++++++||||++..| ..+....+|++
T Consensus 248 ~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei~~h~~~~~~~~~~~~~~~~~~~~~ 325 (371)
T cd05622 248 YADSLVGTYSKIMNHKNSLTFPD-DNDISKEAKNLICAFLT-DREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVV 325 (371)
T ss_pred CCCCHHHHHHHHHcCCCcccCCC-cCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHHhcCcccCCCChhHHhcCCCCCCCC
Confidence 99998888888876542 2332 34689999999999998 6777766669999999999998655 45555567888
Q ss_pred CCCCCCCCCCCcc
Q 001783 897 PTSESALDTSYFT 909 (1013)
Q Consensus 897 P~~~s~lDts~Fs 909 (1013)
|......+.++|.
T Consensus 326 ~~~~~~~~~~~~~ 338 (371)
T cd05622 326 PDLSSDIDTSNFD 338 (371)
T ss_pred CCCCCcchhhhcC
Confidence 8876666665553
No 56
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.7e-46 Score=408.88 Aligned_cols=287 Identities=43% Similarity=0.838 Sum_probs=238.9
Q ss_pred CcEEEEEeeccCceEEEEEEEC---CCCCEEEEEEeeccccc-cHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKR---TTGDLFAIKVLKKADMI-RKNAVESILAERDILISV-RNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk---~tgk~VALKVlkk~~~~-~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~L 664 (1013)
+|++++.||+|+||+||+|++. .+++.||+|++.+.... .....+.+..|+.++..+ +||||++++++|...+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999999874 57899999999765432 233456788999999999 589999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+||||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~- 159 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE- 159 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC-
Confidence 9999999999999999888889999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
.......+||+.|||||++.+. .++.++|||||||++|||++|..||...
T Consensus 160 -----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 210 (332)
T cd05614 160 -----------------------------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLE 210 (332)
T ss_pred -----------------------------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCC
Confidence 0112246799999999999875 4789999999999999999999999643
Q ss_pred C----hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCC--CHHHHHhCCCCCCCChhhHhhh--cCCc
Q 001783 824 H----PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQ--KAAF 895 (1013)
Q Consensus 824 ~----~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~--TAeELLqHPFFk~Idw~~L~~~--kppf 895 (1013)
. ...+...+.... +.++..++..+.+||.+||+.||.+||+.+ +++++++||||++++|..+... .+++
T Consensus 211 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~ 287 (332)
T cd05614 211 GERNTQSEVSRRILKCD---PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPF 287 (332)
T ss_pred CCCCCHHHHHHHHhcCC---CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCc
Confidence 2 333444444433 234567899999999999999999999876 8999999999999999887654 4667
Q ss_pred cCCCCCCCCCCCcc
Q 001783 896 VPTSESALDTSYFT 909 (1013)
Q Consensus 896 vP~~~s~lDts~Fs 909 (1013)
.|......+...|.
T Consensus 288 ~~~~~~~~~~~~~~ 301 (332)
T cd05614 288 RPSIRNELDVGNFA 301 (332)
T ss_pred CCCCCCcchhhhcC
Confidence 77776666665554
No 57
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2e-46 Score=408.65 Aligned_cols=284 Identities=43% Similarity=0.840 Sum_probs=241.6
Q ss_pred EEEeeccCceEEEEEEEC---CCCCEEEEEEeeccccc-cHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 594 IKPISRGAFGRVFLAKKR---TTGDLFAIKVLKKADMI-RKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 594 lk~LGkG~FGtVyLArdk---~tgk~VALKVlkk~~~~-~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
++.||+|+||.||+|++. .+++.||+|++++.... .......+.+|+.+|+.++||||+++++.|..++.+|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 367999999999999874 57889999999865432 22334567899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
|++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------- 153 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE------- 153 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-------
Confidence 9999999999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHH
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIF 829 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~ 829 (1013)
.......+||+.|+|||++.+..++.++|||||||++|||++|++||...+....+
T Consensus 154 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~ 209 (323)
T cd05584 154 ------------------------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTI 209 (323)
T ss_pred ------------------------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHH
Confidence 01122457999999999999999999999999999999999999999998888888
Q ss_pred HhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCC
Q 001783 830 DNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDT 905 (1013)
Q Consensus 830 qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDt 905 (1013)
..+...... ++..+++++.+||.+||++||.+||+. .+++++++||||+..+|..+... .+++.+......+.
T Consensus 210 ~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
T cd05584 210 DKILKGKLN---LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLLARKVEPPFKPLLQSEEDV 286 (323)
T ss_pred HHHHcCCCC---CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHHhcCCCCCCcCCCCCCcchh
Confidence 888776543 456789999999999999999999963 47999999999999999888654 35666666555565
Q ss_pred CCcccc
Q 001783 906 SYFTSR 911 (1013)
Q Consensus 906 s~Fss~ 911 (1013)
+.|...
T Consensus 287 ~~~~~~ 292 (323)
T cd05584 287 SQFDSK 292 (323)
T ss_pred hhcCch
Confidence 555543
No 58
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.5e-46 Score=418.36 Aligned_cols=289 Identities=42% Similarity=0.758 Sum_probs=241.1
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+++.++||||+++++++.+..++|+|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 46799999999999999999999999999999999875544444556788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||||+||+|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.... .
T Consensus 122 ~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~--~--- 195 (370)
T cd05621 122 MEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE--T--- 195 (370)
T ss_pred EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceeccc--C---
Confidence 999999999999976 4689999999999999999999999999999999999999999999999999873100 0
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC----CCccceeechhHHHHHHHhCCCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG----HGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~----ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
........+||+.|||||++.+.. ++.++|||||||++|+|++|.+||.+.
T Consensus 196 -------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 196 -------------------------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred -------------------------CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 000123468999999999997643 788999999999999999999999999
Q ss_pred ChhHHHHhhhccCCCCCCCC--CCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChh--hHhhhcCCccCCC
Q 001783 824 HPQQIFDNILNRKIPWPRVP--EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWD--TLARQKAAFVPTS 899 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~~p~lp--~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~--~L~~~kppfvP~~ 899 (1013)
+....+.+++.....+ .+| ..++..+++||.+||+. +.+|++..++.++++||||++..|+ .+....+++.|..
T Consensus 251 ~~~~~~~~i~~~~~~~-~~p~~~~~s~~~~~li~~~L~~-~~~r~~R~~~~e~l~hp~~~~~~~~~~~~~~~~~~~~p~~ 328 (370)
T cd05621 251 SLVGTYSKIMDHKNSL-NFPEDVEISKHAKNLICAFLTD-REVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPEL 328 (370)
T ss_pred CHHHHHHHHHhCCccc-CCCCcccCCHHHHHHHHHHccC-chhccCCCCHHHHhcCcccCCCCcChHhcCCCCCCcCCCC
Confidence 8888888887654322 222 35799999999999984 4444433499999999999987664 4444467888887
Q ss_pred CCCCCCCCcc
Q 001783 900 ESALDTSYFT 909 (1013)
Q Consensus 900 ~s~lDts~Fs 909 (1013)
....|.++|.
T Consensus 329 ~~~~~~~~~~ 338 (370)
T cd05621 329 SSDIDSSNFD 338 (370)
T ss_pred CCcchhhhcC
Confidence 7777766664
No 59
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.1e-46 Score=409.59 Aligned_cols=282 Identities=37% Similarity=0.734 Sum_probs=238.3
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
+.||+|+||+||+|+++.+++.||+|++++...........+.+|..++..+ +||||+++++++.+.+++|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999876555555667888999999887 699999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~----------- 149 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP----------- 149 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC-------Chh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE-------HPQ 826 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~-------~~~ 826 (1013)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||... ...
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~ 209 (327)
T cd05617 150 --------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTED 209 (327)
T ss_pred --------------------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHH
Confidence 01123468999999999999999999999999999999999999999532 223
Q ss_pred HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC---CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCC
Q 001783 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS---GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSES 901 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~---~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s 901 (1013)
..++.+..... .+|..++..+.++|.+||.+||.+|++. .+.+++++||||+.++|+.+... .++|.|....
T Consensus 210 ~~~~~~~~~~~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~ 286 (327)
T cd05617 210 YLFQVILEKPI---RIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQITD 286 (327)
T ss_pred HHHHHHHhCCC---CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCCCCC
Confidence 34444444433 3566789999999999999999999964 25789999999999999988765 4577777766
Q ss_pred CCCCCCccc
Q 001783 902 ALDTSYFTS 910 (1013)
Q Consensus 902 ~lDts~Fss 910 (1013)
..+..+|++
T Consensus 287 ~~~~~~~~~ 295 (327)
T cd05617 287 DYGLENFDT 295 (327)
T ss_pred CcchhhcCC
Confidence 556666654
No 60
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=9.8e-47 Score=410.21 Aligned_cols=281 Identities=39% Similarity=0.810 Sum_probs=244.3
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
+.||+|+||+||+|++..+++.||||++++...........+.+|..++..+ +||||+++++++...+++|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999999999999999876554455567788899999887 699999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|..++.+.+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----------- 149 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG----------- 149 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998631100
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl 833 (1013)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+.
T Consensus 150 --------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~ 209 (318)
T cd05570 150 --------------------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSIL 209 (318)
T ss_pred --------------------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence 011223579999999999999999999999999999999999999999988888888887
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCH-----HHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCC
Q 001783 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGA-----SEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTS 906 (1013)
Q Consensus 834 ~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TA-----eELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts 906 (1013)
..... ++..++.++.+||.+||+.||.+|| ++ .++++||||+.++|...... .+++.|......+.+
T Consensus 210 ~~~~~---~~~~~~~~~~~li~~~l~~dP~~R~---s~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (318)
T cd05570 210 EDEVR---YPRWLSKEAKSILKSFLTKNPEKRL---GCLPTGEQDIKGHPFFREIDWDKLERKEIKPPFKPKIKGRFDVS 283 (318)
T ss_pred cCCCC---CCCcCCHHHHHHHHHHccCCHHHcC---CCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhh
Confidence 66543 4567899999999999999999999 77 99999999999999887654 467777777767766
Q ss_pred Cccccc
Q 001783 907 YFTSRY 912 (1013)
Q Consensus 907 ~Fss~~ 912 (1013)
+|+..+
T Consensus 284 ~~~~~~ 289 (318)
T cd05570 284 NFDDEF 289 (318)
T ss_pred hcCchh
Confidence 665543
No 61
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.1e-46 Score=405.66 Aligned_cols=281 Identities=41% Similarity=0.806 Sum_probs=238.1
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHH-HHHhcCCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERD-ILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~-IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
+.||+|+||+||+|++..+++.||+|++.+...........+..|.. +++.++||||+++++.+.+.+.+|+||||++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999998755444444455666655 57889999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|..++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----------- 149 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP----------- 149 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998731000
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl 833 (1013)
.......+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+....+..+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~ 209 (321)
T cd05603 150 --------------------EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNIL 209 (321)
T ss_pred --------------------CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHh
Confidence 001224579999999999999999999999999999999999999999998888888887
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC-CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCCcc
Q 001783 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFT 909 (1013)
Q Consensus 834 ~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~-~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~Fs 909 (1013)
..... ++...+..+.++|.+||++||.+|++. .++.++++|+||..++|..+... .+++.|......+...|+
T Consensus 210 ~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (321)
T cd05603 210 HKPLQ---LPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDDLYHKRITPPYNPNVAGPADLRHFD 285 (321)
T ss_pred cCCCC---CCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHHHhcCCCCCCcCCCCCCcchhhhcC
Confidence 76543 456788999999999999999999964 36789999999999999988654 356666655555555554
No 62
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-47 Score=439.72 Aligned_cols=260 Identities=33% Similarity=0.613 Sum_probs=239.4
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
.++-|++.+.||+|+-|.|.+|++..||+.+|||++.+...........+.+|+-||+.+.||||+++|++++++.++|+
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 34569999999999999999999999999999999988754455556788899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|+||++||.|++++.+.|.+++..+.++++||+.|+.|||..+|+||||||+|+|++..++|||+|||+|.+..
T Consensus 90 vlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~------ 163 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEV------ 163 (786)
T ss_pred EEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeeccc------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997511
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCC-CccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH-GTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~y-s~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
.+....+.||+|.|.|||++.|.+| +.++||||.|||||.||||+.||.+++.
T Consensus 164 --------------------------~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi 217 (786)
T KOG0588|consen 164 --------------------------PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI 217 (786)
T ss_pred --------------------------CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH
Confidence 1223456799999999999999988 7899999999999999999999999999
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCC
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Id 884 (1013)
..++.++..+.+.+ |..+|.++++||++||..||++|+ |.+||++|||+.+..
T Consensus 218 r~LLlKV~~G~f~M---Ps~Is~eaQdLLr~ml~VDp~~Ri---T~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 218 RVLLLKVQRGVFEM---PSNISSEAQDLLRRMLDVDPSTRI---TTEEILKHPFLSGYT 270 (786)
T ss_pred HHHHHHHHcCcccC---CCcCCHHHHHHHHHHhccCccccc---cHHHHhhCchhhcCC
Confidence 99999999988765 468999999999999999999999 999999999998654
No 63
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.3e-46 Score=407.89 Aligned_cols=282 Identities=39% Similarity=0.793 Sum_probs=237.9
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHH-HHHhcCCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERD-ILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~-IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
+.||+|+||+||+|+++.+++.||+|++.+...........+..|.. +++.++||||+++++++...+.+|+||||++|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999999999999999998654433333445555554 46779999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~----------- 149 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH----------- 149 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl 833 (1013)
.......+||+.|||||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~ 209 (325)
T cd05602 150 --------------------NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 209 (325)
T ss_pred --------------------CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 011234679999999999999999999999999999999999999999998888888887
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC-CCHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCCccc
Q 001783 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1013)
Q Consensus 834 ~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~-~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~Fss 910 (1013)
..... ++..++..+.+||.+||++||.+|++. ....++++|+||..++|+.+... .+++.|......+...|..
T Consensus 210 ~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T cd05602 210 NKPLQ---LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDLINKKITPPFNPNVSGPNDLRHFDP 286 (325)
T ss_pred hCCcC---CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHHHHhCCCCcCcCCCCCCcchhhhcCC
Confidence 65543 345789999999999999999999964 24569999999999999998754 3566666655555555544
No 64
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.9e-46 Score=409.41 Aligned_cols=281 Identities=36% Similarity=0.739 Sum_probs=234.9
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
+.||+|+||+||+|+++.+++.||+|++++...........+.+|+.++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999876544455667788899988776 899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|..++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~----------- 149 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP----------- 149 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC---------CC
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA---------EH 824 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g---------~~ 824 (1013)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.. ..
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~ 209 (329)
T cd05618 150 --------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 209 (329)
T ss_pred --------------------CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCccccc
Confidence 0012245799999999999999999999999999999999999999952 11
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC---CCHHHHHhCCCCCCCChhhHhhh--cCCccCCC
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS---GGASEVKQHVFFKDINWDTLARQ--KAAFVPTS 899 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~---~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~ 899 (1013)
...+.+.+..... .+|..++..+.+||.+||+.||.+|++. .++.++++||||++++|+.+... .+++.|..
T Consensus 210 ~~~~~~~i~~~~~---~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~~~~~~ 286 (329)
T cd05618 210 EDYLFQVILEKQI---RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQVVPPFKPNI 286 (329)
T ss_pred HHHHHHHHhcCCC---CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHcCCCCcCccCCC
Confidence 2234444544443 3566789999999999999999999953 24689999999999999988654 46677766
Q ss_pred CCCCCCCCcc
Q 001783 900 ESALDTSYFT 909 (1013)
Q Consensus 900 ~s~lDts~Fs 909 (1013)
....+..+|.
T Consensus 287 ~~~~~~~~~~ 296 (329)
T cd05618 287 SGEFGLDNFD 296 (329)
T ss_pred CCcccchhcC
Confidence 5554555554
No 65
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-47 Score=413.74 Aligned_cols=299 Identities=35% Similarity=0.720 Sum_probs=267.6
Q ss_pred CCCCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCCeeEEEeeeec
Q 001783 582 SKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVRFFYSFTC 660 (1013)
Q Consensus 582 ~k~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~-L~HPNIVkL~e~fed 660 (1013)
+++...+++|.++++||+|+|++|.+++++.|.+.||+|+++|.-....+.+.....|..+... .+||++|-|+.+|++
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt 322 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT 322 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence 4567788999999999999999999999999999999999999877777788888999988876 479999999999999
Q ss_pred cceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccc
Q 001783 661 RENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1013)
Q Consensus 661 ~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1013)
+..+++|.||++||+|..+++++..++++.+++|..+|+.||.|||++|||+||||.+|+|++..||+||+|+|+++.++
T Consensus 323 esrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred cceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998532
Q ss_pred cCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001783 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 741 ~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
.. ...+.++||||.|+|||++.|..|++.+|||+|||+|+||+.|+.||
T Consensus 403 ~~-------------------------------gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspf 451 (593)
T KOG0695|consen 403 GP-------------------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 451 (593)
T ss_pred CC-------------------------------CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCc
Confidence 21 12345789999999999999999999999999999999999999999
Q ss_pred CC--------CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC---CCHHHHHhCCCCCCCChhhHh
Q 001783 821 NA--------EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS---GGASEVKQHVFFKDINWDTLA 889 (1013)
Q Consensus 821 ~g--------~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~---~TAeELLqHPFFk~Idw~~L~ 889 (1013)
.- .+...+++-|+..... +|..+|-.+..+++..|.+||.+|+|. -+..++..|+||+.|+|+.++
T Consensus 452 divgm~n~d~ntedylfqvilekqir---iprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~le 528 (593)
T KOG0695|consen 452 DIVGMDNPDMNTEDYLFQVILEKQIR---IPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLE 528 (593)
T ss_pred ceecCCCcccchhHHHHHHHhhhccc---ccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHh
Confidence 51 2334566777776654 566889999999999999999999985 368999999999999999998
Q ss_pred hh--cCCccCCCCCCCCCCCccccccC
Q 001783 890 RQ--KAAFVPTSESALDTSYFTSRYSW 914 (1013)
Q Consensus 890 ~~--kppfvP~~~s~lDts~Fss~~s~ 914 (1013)
++ .|||.|......+..+|+.+|.-
T Consensus 529 qk~v~ppf~p~i~~d~~l~~fd~qft~ 555 (593)
T KOG0695|consen 529 QKQVLPPFQPQITDDYGLDNFDTQFTS 555 (593)
T ss_pred hcccCCCCCCccccccCcccccccccc
Confidence 76 58999999998888888877643
No 66
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=7.7e-48 Score=436.15 Aligned_cols=256 Identities=35% Similarity=0.616 Sum_probs=235.8
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
+++|.+++.||+|+||.||+|+.+.+.+.||||.+.|... .++.++.+.+|++|++.++|||||.++++|++..++++|
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence 4679999999999999999999999999999999988653 345678899999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
+|||.| +|+.++...+.++|+.++.++.+++.||.|||+++|+|||+||.|||+...|++||||||+|+....
T Consensus 80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~------ 152 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST------ 152 (808)
T ss_pred ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhccc------
Confidence 999987 9999999999999999999999999999999999999999999999999999999999999984100
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
.....++..|||.|||||++.+.+|+..+|+||||||+|||++|+|||...+..+
T Consensus 153 -------------------------~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~ 207 (808)
T KOG0597|consen 153 -------------------------NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQ 207 (808)
T ss_pred -------------------------CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 0123456789999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 828 i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
+...|+.....+| ..+|..+.+||+.+|.+||.+|+ +..+++.|||.++
T Consensus 208 Lv~~I~~d~v~~p---~~~S~~f~nfl~gLL~kdP~~Rl---tW~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 208 LVKSILKDPVKPP---STASSSFVNFLQGLLIKDPAQRL---TWTDLLGHPFWKG 256 (808)
T ss_pred HHHHHhcCCCCCc---ccccHHHHHHHHHHhhcChhhcc---cHHHHhcChHHhh
Confidence 9999998877654 48999999999999999999999 9999999999985
No 67
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.2e-47 Score=411.86 Aligned_cols=260 Identities=25% Similarity=0.465 Sum_probs=222.4
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
++.|+.+.++|+|+||.||+|+++.||+.||||.+..+. ......+..++|+++|++++|||+|.|+++|..+..++||
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 467999999999999999999999999999999986543 3345567788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
+|||+. ++.+-+.+. ..++++.++.|++|++.|+.|+|+++||||||||+||||+.+|.+||||||+|+....
T Consensus 80 FE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~----- 153 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA----- 153 (396)
T ss_pred eeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC-----
Confidence 999987 555556554 5699999999999999999999999999999999999999999999999999984110
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
.+...+.++.|.+|+|||.+.| ..|+.++||||+||++.||++|.+.|.+.+.
T Consensus 154 --------------------------pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SD 207 (396)
T KOG0593|consen 154 --------------------------PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSD 207 (396)
T ss_pred --------------------------CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcch
Confidence 0122345789999999999998 7899999999999999999999999999988
Q ss_pred hHHHHhhhccCC-------------------CCCCC---------CCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 826 QQIFDNILNRKI-------------------PWPRV---------PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 826 ~ei~qkIl~~~~-------------------~~p~l---------p~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.+.+..|..... .+|.. .+.++.-+.||+.+||+.||.+|+ +.++++.|
T Consensus 208 iDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~---sc~qll~H 284 (396)
T KOG0593|consen 208 IDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRL---SCEQLLHH 284 (396)
T ss_pred HHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccc---cHHHHhcC
Confidence 777666654211 12211 134677899999999999999999 99999999
Q ss_pred CCCCCC
Q 001783 878 VFFKDI 883 (1013)
Q Consensus 878 PFFk~I 883 (1013)
|||.++
T Consensus 285 ~yFd~~ 290 (396)
T KOG0593|consen 285 PYFDGF 290 (396)
T ss_pred hHHHHH
Confidence 999643
No 68
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.8e-46 Score=404.49 Aligned_cols=281 Identities=42% Similarity=0.801 Sum_probs=238.5
Q ss_pred EEeeccCceEEEEEEE---CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEec
Q 001783 595 KPISRGAFGRVFLAKK---RTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYL 671 (1013)
Q Consensus 595 k~LGkG~FGtVyLArd---k~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~ 671 (1013)
+.||+|+||+||++++ ..+|+.||+|++++.... ......+.+|+.+|..++||||+++++++.+.+.+|+||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 6799999999999987 357899999999865432 223456778999999999999999999999999999999999
Q ss_pred cCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCC
Q 001783 672 NGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPA 751 (1013)
Q Consensus 672 ~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~ 751 (1013)
.||+|.+++.+...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~--------- 151 (318)
T cd05582 81 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH--------- 151 (318)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC---------
Confidence 99999999988888999999999999999999999999999999999999999999999999998731000
Q ss_pred ccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHh
Q 001783 752 VSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDN 831 (1013)
Q Consensus 752 ~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qk 831 (1013)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+.+..
T Consensus 152 ----------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~ 209 (318)
T cd05582 152 ----------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTM 209 (318)
T ss_pred ----------------------CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHH
Confidence 0112346799999999999998999999999999999999999999999888888888
Q ss_pred hhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCC--HHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCC
Q 001783 832 ILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGG--ASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSY 907 (1013)
Q Consensus 832 Il~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~T--AeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~ 907 (1013)
+...... ++..+++++.+||++||+.||.+||++.. +++++.||||..++|..+... .+++.|......+..+
T Consensus 210 i~~~~~~---~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (318)
T cd05582 210 ILKAKLG---MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRREIKPPFKPAVGRPDDTFY 286 (318)
T ss_pred HHcCCCC---CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHHhcCCCCCcCCCCCCcchhhh
Confidence 8766543 45678999999999999999999995433 889999999999999988654 3566666555444444
Q ss_pred ccc
Q 001783 908 FTS 910 (1013)
Q Consensus 908 Fss 910 (1013)
+.+
T Consensus 287 ~~~ 289 (318)
T cd05582 287 FDP 289 (318)
T ss_pred cCc
Confidence 444
No 69
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=9.8e-46 Score=394.77 Aligned_cols=277 Identities=34% Similarity=0.601 Sum_probs=233.8
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
.|++++.||+|+||+||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++.+...+++|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48999999999999999999999999999999976554444445667889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 670 y~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|+.||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~------ 154 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE------ 154 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCC------
Confidence 99999999888654 4599999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
.......+||+.|+|||++.+..++.++||||+||++|||++|..||.+.+...
T Consensus 155 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~ 208 (285)
T cd05605 155 --------------------------GETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV 208 (285)
T ss_pred --------------------------CCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh
Confidence 001123579999999999999889999999999999999999999998766544
Q ss_pred HHHhhhccCC-CCCCCCCCCCHHHHHHHHHhccCCcCCcCCCC--CHHHHHhCCCCCCCChhhHhhh--cCCccCC
Q 001783 828 IFDNILNRKI-PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQ--KAAFVPT 898 (1013)
Q Consensus 828 i~qkIl~~~~-~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~--TAeELLqHPFFk~Idw~~L~~~--kppfvP~ 898 (1013)
....+..... ..+..+..++..+.+||.+||..||.+||+.. +++++++||||...+|+.+... .+||.|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (285)
T cd05605 209 KREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCPD 284 (285)
T ss_pred HHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhhCCCCCCCCCC
Confidence 3333222111 11234567899999999999999999999765 8999999999999999998765 4677774
No 70
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=5e-45 Score=392.29 Aligned_cols=304 Identities=49% Similarity=0.907 Sum_probs=258.0
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||.||++.+..+++.||+|.+.+...........+.+|+++++.++||||+++++.+...+++|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 46999999999999999999999999999999988765444455678889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||++|++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+.........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY 160 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence 99999999999988888999999999999999999999999999999999999999999999999998742211110000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
... .. ............|+..|+|||.+.+..++.++|+|||||++|||++|..||.+....+.
T Consensus 161 ~~~-------------~~---~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~ 224 (305)
T cd05609 161 EGH-------------IE---KDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL 224 (305)
T ss_pred ccc-------------cc---cchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 000 00 00001111235689999999999988899999999999999999999999999888888
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhhcCCccCCCCCCCCCCCc
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSESALDTSYF 908 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~kppfvP~~~s~lDts~F 908 (1013)
+..+......++.....++.++.+||.+||+.||.+||+..++.++++||||...+|..+.+....++|......+.+||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (305)
T cd05609 225 FGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNGLLRQKAEFIPQLESEDDTSYF 304 (305)
T ss_pred HHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHHHHhhcCCCCCCCCCCccccccC
Confidence 88887766655655557899999999999999999999877799999999999999999988888989998887777775
No 71
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.5e-45 Score=392.44 Aligned_cols=267 Identities=34% Similarity=0.654 Sum_probs=224.8
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCCCh
Q 001783 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1013)
Q Consensus 597 LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL 676 (1013)
||+|+||+||+|.++.+++.||+|++.+.........+.+..|+.+++.++||||++++++|.....+|+||||++||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999999999999999999876544444556788999999999999999999999999999999999999999
Q ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCc
Q 001783 677 YSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAV 752 (1013)
Q Consensus 677 ~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~ 752 (1013)
..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~---------- 150 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG---------- 150 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCC----------
Confidence 988743 346999999999999999999999999999999999999999999999999998631000
Q ss_pred cCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh----hHH
Q 001783 753 SGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP----QQI 828 (1013)
Q Consensus 753 ~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~----~ei 828 (1013)
........||+.|+|||++.+..++.++|+|||||++|+|++|+.||..... ...
T Consensus 151 ---------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~ 209 (280)
T cd05608 151 ---------------------QSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 209 (280)
T ss_pred ---------------------CccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHH
Confidence 0012235799999999999999999999999999999999999999976543 223
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhhc--CCccC
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQK--AAFVP 897 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~k--ppfvP 897 (1013)
...+.... ..++..++..+.+|+.+||+.||.+||+. .+++++++||||++++|..+.... +||.|
T Consensus 210 ~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~ 279 (280)
T cd05608 210 KQRILNDS---VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPPPFVP 279 (280)
T ss_pred HHhhcccC---CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHhhccCCCCCCC
Confidence 33333322 23456789999999999999999999975 388999999999999999886643 45554
No 72
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-46 Score=419.79 Aligned_cols=274 Identities=35% Similarity=0.658 Sum_probs=232.1
Q ss_pred CCCCCCCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccH-----------HHHHHHHHHHHHHHhcC
Q 001783 579 IHPSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRK-----------NAVESILAERDILISVR 647 (1013)
Q Consensus 579 ~~P~k~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~-----------e~ie~~l~Ei~IL~~L~ 647 (1013)
+.+......++.|++++.||+|.||+|-+|++..+++.||||++.+...... ..++.+.+|+.||+++.
T Consensus 87 ~~~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~ 166 (576)
T KOG0585|consen 87 YDDDQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH 166 (576)
T ss_pred ecCcccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC
Confidence 3445566778999999999999999999999999999999999987543221 23468999999999999
Q ss_pred CCCeeEEEeeeecc--ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC
Q 001783 648 NPFVVRFFYSFTCR--ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD 725 (1013)
Q Consensus 648 HPNIVkL~e~fed~--~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d 725 (1013)
|||||+|+++..+. +++|||+|||..|.+...-.....+++.+++.|+++++.||+|||.+|||||||||.|+||+.+
T Consensus 167 H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 167 HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSD 246 (576)
T ss_pred CcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCC
Confidence 99999999999875 5799999999998875443333339999999999999999999999999999999999999999
Q ss_pred CcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC----CCccc
Q 001783 726 GHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG----HGTTA 801 (1013)
Q Consensus 726 G~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~----ys~ks 801 (1013)
|+|||+|||.+...... ..+ .........+|||.|||||...+.. -+.+.
T Consensus 247 g~VKIsDFGVs~~~~~~-----------------~~~---------~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~ 300 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQG-----------------SDE---------GSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFAL 300 (576)
T ss_pred CcEEeeccceeeecccC-----------------Ccc---------ccHHHHhhcCCCccccchHhhcCCCCccccchhh
Confidence 99999999998631000 000 0011112379999999999988732 26788
Q ss_pred eeechhHHHHHHHhCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCC
Q 001783 802 DWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 802 DIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk 881 (1013)
|||||||+||.|+.|+.||.+....+++.+|.+....||..+ .+.+.++|||.+||++||.+|+ +..+|+.|||..
T Consensus 301 DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~p-e~~e~~kDli~~lL~KdP~~Ri---~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 301 DIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENP-EINEDLKDLIKRLLEKDPEQRI---TLPDIKLHPWVT 376 (576)
T ss_pred hhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcc-cccHHHHHHHHHHhhcChhhee---ehhhheecceec
Confidence 999999999999999999999999999999999999888765 6889999999999999999999 999999999996
Q ss_pred C
Q 001783 882 D 882 (1013)
Q Consensus 882 ~ 882 (1013)
.
T Consensus 377 ~ 377 (576)
T KOG0585|consen 377 R 377 (576)
T ss_pred c
Confidence 4
No 73
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-47 Score=427.47 Aligned_cols=259 Identities=32% Similarity=0.490 Sum_probs=223.3
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccc-e
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRE-N 663 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~-~ 663 (1013)
..+++|.++++||.|+||.||+|+.+.+|..||||.+++.-...+ .-.-++|+.-|++++ |||||+|++++.+.+ +
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~e--e~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWE--ECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHH--HHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 345789999999999999999999999999999999987543322 234578999999999 999999999999988 9
Q ss_pred EEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 664 LYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
+|+|||||+. +|+++++.. ..|++..++.|+.||++||+|+|++|+.||||||||||+..+..|||+|||||+....
T Consensus 85 L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S- 162 (538)
T KOG0661|consen 85 LYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS- 162 (538)
T ss_pred EeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc-
Confidence 9999999976 999999755 5699999999999999999999999999999999999999999999999999994110
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
....+.++-|.+|+|||+|+. ..|+.++|+||+|||++|+.+-++.|.
T Consensus 163 -------------------------------kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFP 211 (538)
T KOG0661|consen 163 -------------------------------KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFP 211 (538)
T ss_pred -------------------------------CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCC
Confidence 112335789999999999875 558999999999999999999999999
Q ss_pred CCChhHHHHhhhcc-------------------CCCCCCC--------CCCCCHHHHHHHHHhccCCcCCcCCCCCHHHH
Q 001783 822 AEHPQQIFDNILNR-------------------KIPWPRV--------PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1013)
Q Consensus 822 g~~~~ei~qkIl~~-------------------~~~~p~l--------p~~lS~elkDLI~rMLqkDPekRPg~~TAeEL 874 (1013)
|.+..+.+.+|..- .+.||.. ....+.++.+||.+||.+||.+|| ||.++
T Consensus 212 G~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRp---TA~~a 288 (538)
T KOG0661|consen 212 GASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRP---TASQA 288 (538)
T ss_pred CCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCc---cHHHH
Confidence 99988887777651 1223322 234889999999999999999999 99999
Q ss_pred HhCCCCCC
Q 001783 875 KQHVFFKD 882 (1013)
Q Consensus 875 LqHPFFk~ 882 (1013)
|+||||..
T Consensus 289 l~~pffq~ 296 (538)
T KOG0661|consen 289 LQHPFFQV 296 (538)
T ss_pred hcCccccc
Confidence 99999974
No 74
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-47 Score=408.04 Aligned_cols=250 Identities=31% Similarity=0.568 Sum_probs=222.3
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEe-eeeccc
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFY-SFTCRE 662 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e-~fed~~ 662 (1013)
....+.+|+++++||.|+||+||+|++..+|..+|.|.+.- ........+.+..|+.+|++|+|||||++++ .|..++
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f-~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~ 92 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQF-GMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN 92 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcch-hhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc
Confidence 34567889999999999999999999999999999999984 4445666788999999999999999999998 666555
Q ss_pred e-EEEEEEeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh--CC--eeecccCCCceeecCCCcEEEeec
Q 001783 663 N-LYLVMEYLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHS--LR--VVHRDLKPDNLLIAHDGHIKLTDF 733 (1013)
Q Consensus 663 ~-LyLVMEy~~GGSL~dlL~~~----g~LsE~~ar~Ia~QIL~ALeYLHs--~G--IIHRDIKPeNILLd~dG~VKLiDF 733 (1013)
. ++||||||.+|||.++|+.. ..++|..++.|+.|++.||.++|. .. |+||||||.||+|+.+|.|||+||
T Consensus 93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDf 172 (375)
T KOG0591|consen 93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDF 172 (375)
T ss_pred hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccc
Confidence 5 99999999999999999643 569999999999999999999998 45 999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHH
Q 001783 734 GLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFEL 813 (1013)
Q Consensus 734 GLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYEL 813 (1013)
||++... .......+.+|||.||+||++.+.+|+.++|||||||++|||
T Consensus 173 GL~r~l~-------------------------------s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEM 221 (375)
T KOG0591|consen 173 GLGRFLS-------------------------------SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEM 221 (375)
T ss_pred hhHhHhc-------------------------------chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHH
Confidence 9998521 111234578999999999999999999999999999999999
Q ss_pred HhCCCCCCCCChhHHHHhhhccCCCCCCCC-CCCCHHHHHHHHHhccCCcCCcCC
Q 001783 814 IVGIPPFNAEHPQQIFDNILNRKIPWPRVP-EEMSPEAHDLIDRFLTEDPHQRLG 867 (1013)
Q Consensus 814 LTGk~PF~g~~~~ei~qkIl~~~~~~p~lp-~~lS~elkDLI~rMLqkDPekRPg 867 (1013)
+.-.+||.+++..++.++|.++. +|.+| ...|.++..||..|+..||..||+
T Consensus 222 caL~~PF~g~n~~~L~~KI~qgd--~~~~p~~~YS~~l~~li~~ci~vd~~~RP~ 274 (375)
T KOG0591|consen 222 CALQSPFYGDNLLSLCKKIEQGD--YPPLPDEHYSTDLRELINMCIAVDPEQRPD 274 (375)
T ss_pred HhcCCCcccccHHHHHHHHHcCC--CCCCcHHHhhhHHHHHHHHHccCCcccCCC
Confidence 99999999999999999998875 45667 678999999999999999999994
No 75
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-46 Score=409.48 Aligned_cols=261 Identities=34% Similarity=0.600 Sum_probs=220.9
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc--eEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE--NLY 665 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~--~Ly 665 (1013)
..+|...+.||+|+||+||++.+..+|..+|+|.+..... ...+.+.+|+.+|.+++|||||++++...... .++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~---~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS---PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccc---hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 3568889999999999999999999999999999876522 12677899999999999999999999755555 699
Q ss_pred EEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC-CCcEEEeecCCccccccCC
Q 001783 666 LVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~g-~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~~~~~s 743 (1013)
+.|||++||+|.+++.+.+ .|++..++.|.+||+.||+|||++|||||||||+|||++. +|.+||+|||+++....
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~-- 170 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES-- 170 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccc--
Confidence 9999999999999999887 7999999999999999999999999999999999999999 79999999999884110
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
.. ..........||+.|||||++.. ....+++|||||||++.||+||++||..
T Consensus 171 ~~--------------------------~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~ 224 (313)
T KOG0198|consen 171 KG--------------------------TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE 224 (313)
T ss_pred cc--------------------------ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence 00 00112335789999999999995 3334599999999999999999999987
Q ss_pred -CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 823 -EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 823 -~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
.......-.+.... ..|.+|..+|.++++||.+||.+||.+|| ||+++|+|||.+..
T Consensus 225 ~~~~~~~~~~ig~~~-~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rp---ta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 225 FFEEAEALLLIGRED-SLPEIPDSLSDEAKDFLRKCFKRDPEKRP---TAEELLEHPFLKQN 282 (313)
T ss_pred hcchHHHHHHHhccC-CCCCCCcccCHHHHHHHHHHhhcCcccCc---CHHHHhhChhhhcc
Confidence 34444444444333 45688999999999999999999999999 99999999999753
No 76
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.5e-44 Score=385.24 Aligned_cols=284 Identities=48% Similarity=0.875 Sum_probs=250.3
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++.+.||+|+||.||+|.+..+++.||+|++.+.........+.+.+|+.+++.++||||+++++.+.....+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46999999999999999999999999999999998765555556778899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||+++++|.+++.+.+.+++..+..++.||+.||+|||++||+||||+|.|||++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~------- 153 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG------- 153 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCC-------
Confidence 9999999999998888899999999999999999999999999999999999999999999999999873100
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
.....+|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+....
T Consensus 154 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 206 (290)
T cd05580 154 ---------------------------RTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQI 206 (290)
T ss_pred ---------------------------CCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 01234789999999999988899999999999999999999999998887777
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCC--CHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCC
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALD 904 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~--TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lD 904 (1013)
.+.+...... ++..++..+.++|.+||+.||.+|++.. +++++++||||..++|..+... .+|+.|......+
T Consensus 207 ~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (290)
T cd05580 207 YEKILEGKVR---FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKIEAPFIPKVKGPGD 283 (290)
T ss_pred HHHHhcCCcc---CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHhhccCCCCccCCCCCccc
Confidence 7777755443 4567899999999999999999999753 8999999999999999988764 4677777766666
Q ss_pred CCCcc
Q 001783 905 TSYFT 909 (1013)
Q Consensus 905 ts~Fs 909 (1013)
.+.|+
T Consensus 284 ~~~~~ 288 (290)
T cd05580 284 TSNFD 288 (290)
T ss_pred ccccc
Confidence 66664
No 77
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.1e-45 Score=387.12 Aligned_cols=258 Identities=31% Similarity=0.479 Sum_probs=215.1
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++.+.||+|+||+||+|+++.+++.||+|+++.... .....+.+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 469999999999999999999999999999999976532 2334567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||++++.|..+......+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----- 154 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS----- 154 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc-----
Confidence 999997776665555679999999999999999999999999999999999999999999999999987310000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
........||+.|+|||++.+..++.++|||||||++|||++|++||.+.+..+.
T Consensus 155 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~ 209 (287)
T cd07848 155 -------------------------NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ 209 (287)
T ss_pred -------------------------cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 0011235789999999999998999999999999999999999999988765544
Q ss_pred HHhhhccCCC-------------------CCC----------CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCC
Q 001783 829 FDNILNRKIP-------------------WPR----------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1013)
Q Consensus 829 ~qkIl~~~~~-------------------~p~----------lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPF 879 (1013)
...+.....+ ++. ....++.++.+||++||++||.+|| +++++++|||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~---s~~~~l~hp~ 286 (287)
T cd07848 210 LFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRY---LTEQCLNHPA 286 (287)
T ss_pred HHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCC---CHHHHhcCCC
Confidence 3333221110 110 1123688899999999999999999 9999999999
Q ss_pred C
Q 001783 880 F 880 (1013)
Q Consensus 880 F 880 (1013)
|
T Consensus 287 f 287 (287)
T cd07848 287 F 287 (287)
T ss_pred C
Confidence 8
No 78
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-45 Score=413.28 Aligned_cols=259 Identities=39% Similarity=0.653 Sum_probs=236.4
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccceEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~LyLV 667 (1013)
+.|++.+.||.|.||.||+|+++.+|+.||+|++.+.........+.+.+|+.||+++. |||||.++++|++...+|+|
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv 114 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV 114 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence 45999999999999999999999999999999999877665556688999999999998 99999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC----CcEEEeecCCccccccCC
Q 001783 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD----GHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d----G~VKLiDFGLAk~~~~~s 743 (1013)
||+|.||+|++.+.+. .+++..+..++.||+.|+.|||+.||+||||||+|+|+... +.+|++|||+|+...
T Consensus 115 mEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~--- 190 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK--- 190 (382)
T ss_pred EEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc---
Confidence 9999999999999876 49999999999999999999999999999999999999643 479999999998411
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
........+|||.|+|||++...+|+..+||||+||++|.|++|.+||.+.
T Consensus 191 -----------------------------~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~ 241 (382)
T KOG0032|consen 191 -----------------------------PGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGE 241 (382)
T ss_pred -----------------------------CCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCC
Confidence 012345689999999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhhccCCCCCC-CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 824 HPQQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~~p~-lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
+....+.+|......++. .+..++..+++||++||..||.+|+ +|.++|+|||+++.
T Consensus 242 ~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~---ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 242 TEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRL---TAAQALQHPWIKSI 299 (382)
T ss_pred ChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCC---CHHHHhcCccccCC
Confidence 999999999998877653 3567899999999999999999999 99999999998864
No 79
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-47 Score=400.01 Aligned_cols=259 Identities=32% Similarity=0.553 Sum_probs=234.8
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
+.|++.+.||+|.|+.|+.+.+..+|+.||+|+++...+... ..+.+.+|+.|-+.++||||++|.+.+......|||+
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 459999999999999999999999999999999986655444 5678999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC---CcEEEeecCCccccccCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD---GHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d---G~VKLiDFGLAk~~~~~s~d 745 (1013)
|+|.|++|..-|-..-.++|..+..+++||+.||.|+|.+||||||+||+|+|+... .-+||+|||+|....
T Consensus 90 e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~----- 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN----- 164 (355)
T ss_pred ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC-----
Confidence 999999998877665678999999999999999999999999999999999999643 469999999998310
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
.......++|||.|||||++...+|+.++|||+-|||||-||.|.+||++.+.
T Consensus 165 ---------------------------~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~ 217 (355)
T KOG0033|consen 165 ---------------------------DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ 217 (355)
T ss_pred ---------------------------CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH
Confidence 11223457999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhccCCCCCC-CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 826 QQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~-lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
..+|++|+.+.+.++. .+..+++++++||++||..||.+|+ ||.|.|+|||+++-
T Consensus 218 ~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRI---ta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 218 HRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRI---TADEALKHPWICNR 273 (355)
T ss_pred HHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhc---cHHHHhCCchhcch
Confidence 9999999999998875 6788999999999999999999999 99999999999863
No 80
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-46 Score=392.05 Aligned_cols=261 Identities=35% Similarity=0.686 Sum_probs=242.7
Q ss_pred CCCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc
Q 001783 583 KDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1013)
Q Consensus 583 k~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~ 662 (1013)
.....+++|++.+.||+|-||.||+|+.+.++-.||+||+.|..+........+.+|++|...|+||||+++|++|.+..
T Consensus 16 ~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ 95 (281)
T KOG0580|consen 16 TKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK 95 (281)
T ss_pred ccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc
Confidence 34567899999999999999999999999999999999999988877777788999999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccc
Q 001783 663 NLYLVMEYLNGGDLYSLLR--NLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~--~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1013)
.+||++||..+|+|+..+. ....+++..+..|++|++.||.|+|.++||||||||+|+|++..|.+||+|||-+...
T Consensus 96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~- 174 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHA- 174 (281)
T ss_pred eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeec-
Confidence 9999999999999999998 5577999999999999999999999999999999999999999999999999988631
Q ss_pred cCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001783 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 741 ~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
...++.+.|||..|.+||+..+..++..+|+|++|++.||++.|.+||
T Consensus 175 --------------------------------p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppF 222 (281)
T KOG0580|consen 175 --------------------------------PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPF 222 (281)
T ss_pred --------------------------------CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCch
Confidence 012456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
...+..+++++|......+| ..++.++.|||.+||.++|.+|+ ...|++.|||...
T Consensus 223 es~~~~etYkrI~k~~~~~p---~~is~~a~dlI~~ll~~~p~~r~---~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 223 ESQSHSETYKRIRKVDLKFP---STISGGAADLISRLLVKNPIERL---ALTEVMDHPWIVA 278 (281)
T ss_pred hhhhhHHHHHHHHHccccCC---cccChhHHHHHHHHhccCccccc---cHHHHhhhHHHHh
Confidence 99999999999999887654 68999999999999999999999 9999999999864
No 81
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7.9e-45 Score=388.34 Aligned_cols=257 Identities=27% Similarity=0.508 Sum_probs=215.1
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
.+++|++++.||.|+||+||+|+++.+++.||+|+++.... ......+.+|+.+++.++||||+++++++.+.+.+|+
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 80 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTL 80 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 35789999999999999999999999999999999875432 2223467789999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 667 VMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g-~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
||||++| +|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~--- 156 (288)
T cd07871 81 VFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP--- 156 (288)
T ss_pred EEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC---
Confidence 9999975 9999887654 5899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+
T Consensus 157 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~ 208 (288)
T cd07871 157 ----------------------------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST 208 (288)
T ss_pred ----------------------------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 001123478999999999876 568999999999999999999999999887
Q ss_pred hhHHHHhhhccCC-------------------CCCC--------CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 825 PQQIFDNILNRKI-------------------PWPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 825 ~~ei~qkIl~~~~-------------------~~p~--------lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
..+....+..... .++. ....++.++.+||.+||++||.+|| |++|+++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~---t~~~~l~h 285 (288)
T cd07871 209 VKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRI---SAEAALRH 285 (288)
T ss_pred HHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCC---CHHHHhcC
Confidence 7666555433110 0110 1134688999999999999999999 99999999
Q ss_pred CCC
Q 001783 878 VFF 880 (1013)
Q Consensus 878 PFF 880 (1013)
|||
T Consensus 286 p~f 288 (288)
T cd07871 286 SYF 288 (288)
T ss_pred CCC
Confidence 998
No 82
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-45 Score=421.94 Aligned_cols=260 Identities=33% Similarity=0.570 Sum_probs=235.2
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
+.....|....+||+|+.|.||.|+...+++.||||.+...... ..+.+++|+.+|+..+|+|||++++.|...+.+
T Consensus 269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~---~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deL 345 (550)
T KOG0578|consen 269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP---KKELLLNEILVMRDLHHPNIVNFLDSYLVGDEL 345 (550)
T ss_pred CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC---chhhhHHHHHHHHhccchHHHHHHHHhccccee
Confidence 33446799999999999999999999999999999999876532 336789999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
++|||||+||+|.+++.. -.++|.++..+.++++.||+|||.+||||||||.+|||++.+|.+||+|||+|.....
T Consensus 346 WVVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~--- 421 (550)
T KOG0578|consen 346 WVVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE--- 421 (550)
T ss_pred EEEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccc---
Confidence 999999999999999976 4599999999999999999999999999999999999999999999999999874211
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
...++.+.+|||.|||||++....|++++||||||++++||+.|++||..++
T Consensus 422 ----------------------------~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~ 473 (550)
T KOG0578|consen 422 ----------------------------EQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN 473 (550)
T ss_pred ----------------------------ccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC
Confidence 1124567899999999999999999999999999999999999999999999
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
+-..+..|.....+-...++.+|+.++|||.+||+.|+.+|+ +|.|||+||||+-
T Consensus 474 PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ra---sA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 474 PLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRA---SAKELLEHPFLKM 528 (550)
T ss_pred hHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCC---CHHHHhcChhhhh
Confidence 988888888877766667889999999999999999999999 9999999999953
No 83
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2e-44 Score=385.26 Aligned_cols=275 Identities=35% Similarity=0.646 Sum_probs=230.1
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
.|++.+.||+|+||+||+|.+..+++.||+|.+.+...........+.+|+.+++.++|+||+.+++.+.+.+.+|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 48889999999999999999999999999999876554444455677889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 670 y~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|++|++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~------ 154 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE------ 154 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCC------
Confidence 99999999988654 3589999999999999999999999999999999999999999999999999863100
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh-
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ- 826 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~- 826 (1013)
........||+.|+|||++.+..++.++|||||||++|+|++|.+||......
T Consensus 155 --------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~ 208 (285)
T cd05630 155 --------------------------GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 208 (285)
T ss_pred --------------------------CccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc
Confidence 00012347999999999999999999999999999999999999999865432
Q ss_pred --HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhh--hcCCccCC
Q 001783 827 --QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLAR--QKAAFVPT 898 (1013)
Q Consensus 827 --ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~--~kppfvP~ 898 (1013)
.....+..... ...+..+++++.+||.+||+.||.+||+. ++++++++||||+.++|..+.. .+|+|+|.
T Consensus 209 ~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~ 284 (285)
T cd05630 209 KREEVERLVKEVQ--EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPFKPD 284 (285)
T ss_pred hHHHHHhhhhhhh--hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhcCCCCCCCCCC
Confidence 22222222111 23456789999999999999999999942 1399999999999999998866 35777775
No 84
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.9e-44 Score=383.45 Aligned_cols=264 Identities=32% Similarity=0.612 Sum_probs=220.5
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCCCh
Q 001783 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1013)
Q Consensus 597 LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL 676 (1013)
||+|+||+||+++++.+|+.||+|++.+...........+..|+++++.++||||+++++.+....++|+||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999999999999999999765443333445667799999999999999999999999999999999999999
Q ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccC
Q 001783 677 YSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSG 754 (1013)
Q Consensus 677 ~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~g 754 (1013)
.+++...+ .+++..+..++.||+.||+|||+.||+||||||+|||++.++.++|+|||++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~------------- 147 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKD------------- 147 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCC-------------
Confidence 99886543 588999999999999999999999999999999999999999999999999863100
Q ss_pred cccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh----hHHHH
Q 001783 755 TTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP----QQIFD 830 (1013)
Q Consensus 755 ttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~----~ei~q 830 (1013)
........||+.|+|||++.+..++.++|||||||++|||++|..||..... .++..
T Consensus 148 -------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~ 208 (277)
T cd05607 148 -------------------GKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKR 208 (277)
T ss_pred -------------------CceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHH
Confidence 0001234689999999999998899999999999999999999999976432 23334
Q ss_pred hhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCH----HHHHhCCCCCCCChhhHhhh--cCCccC
Q 001783 831 NILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGA----SEVKQHVFFKDINWDTLARQ--KAAFVP 897 (1013)
Q Consensus 831 kIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TA----eELLqHPFFk~Idw~~L~~~--kppfvP 897 (1013)
.+......+ ....++.++.+||.+||++||.+|| ++ ++++.||||+.++|..+... .+||+|
T Consensus 209 ~~~~~~~~~--~~~~~~~~~~~li~~~L~~~P~~R~---~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~ 276 (277)
T cd05607 209 RTLEDEVKF--EHQNFTEESKDICRLFLAKKPEDRL---GSREKNDDPRKHEFFKTINFPRLEAGLIPPPFVP 276 (277)
T ss_pred Hhhcccccc--ccccCCHHHHHHHHHHhccCHhhCC---CCccchhhhhcChhhcCCCHHHHhcCcCCCCCCC
Confidence 433333222 2246899999999999999999999 66 78999999999999999865 456655
No 85
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-45 Score=414.65 Aligned_cols=260 Identities=33% Similarity=0.560 Sum_probs=226.3
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--ceEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENLY 665 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~--~~Ly 665 (1013)
.+.|+.+++||+|+||.||+|++..+|+.||+|.+..... +.....-+.+|+.||++|+||||++|.+...+. ..+|
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 4669999999999999999999999999999999987653 344567788999999999999999999998887 6899
Q ss_pred EEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 666 LVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~g-~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
||+|||+. ||.-++...+ .|++.+++.||+||+.||+|||.+||+|||||..|||||.+|.+||+|||||++.....
T Consensus 195 lVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~- 272 (560)
T KOG0600|consen 195 LVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG- 272 (560)
T ss_pred EEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC-
Confidence 99999987 9999998754 69999999999999999999999999999999999999999999999999999522111
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
....++.+-|.+|+|||+|+| ..|+.++|+||.||||.||++|++.|.+.
T Consensus 273 -----------------------------~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~ 323 (560)
T KOG0600|consen 273 -----------------------------SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR 323 (560)
T ss_pred -----------------------------CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc
Confidence 112446789999999999998 56999999999999999999999999999
Q ss_pred ChhHHHHhhhccCCC-----CC--CC-------------------CCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 824 HPQQIFDNILNRKIP-----WP--RV-------------------PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~-----~p--~l-------------------p~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
+..+.+..|.+.... |+ .+ ...++..+.+|+..||+.||.+|. ||.++|+|
T Consensus 324 tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~---tA~~aL~s 400 (560)
T KOG0600|consen 324 TEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRG---TASSALQS 400 (560)
T ss_pred cHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccc---cHHHHhcC
Confidence 999988888762111 11 11 135789999999999999999999 99999999
Q ss_pred CCCCC
Q 001783 878 VFFKD 882 (1013)
Q Consensus 878 PFFk~ 882 (1013)
+||+.
T Consensus 401 eyF~t 405 (560)
T KOG0600|consen 401 EYFTT 405 (560)
T ss_pred ccccc
Confidence 99953
No 86
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=8.1e-44 Score=383.52 Aligned_cols=306 Identities=41% Similarity=0.788 Sum_probs=246.6
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++.+.||+|+||+||+|.+..+++.||+|.+.+...........+.+|+.++..++||||+++++.+......|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 46999999999999999999999999999999998765554456678999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 669 EYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
||+.|++|.+++.+. ..+++..++.++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++.........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~- 159 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP- 159 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccc-
Confidence 999999999999754 56999999999999999999999999999999999999999999999999998742111000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
................+ ................+||..|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~ 238 (316)
T cd05574 160 VSKALRKGSRRSSVNSI-PSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD 238 (316)
T ss_pred ccccccccccccccccc-chhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 00000000000000000 00000001112234568999999999999988999999999999999999999999988888
Q ss_pred HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCC----HHHHHhCCCCCCCChhhHhhhcCCccCCCC
Q 001783 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGG----ASEVKQHVFFKDINWDTLARQKAAFVPTSE 900 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~T----AeELLqHPFFk~Idw~~L~~~kppfvP~~~ 900 (1013)
..+..+......++.. ..++..+.+||.+||+.||.+|| + ++++++||||++++|..+....+|.+|.+.
T Consensus 239 ~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~---s~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (316)
T cd05574 239 ETFSNILKKEVTFPGS-PPVSSSARDLIRKLLVKDPSKRL---GSKRGAAEIKQHPFFRGVNWALIRHTTPPIIPRPD 312 (316)
T ss_pred HHHHHHhcCCccCCCc-cccCHHHHHHHHHHccCCHhHCC---CchhhHHHHHcCchhhcCChhhcccCCCCCCCCcc
Confidence 8888877665554432 23789999999999999999999 7 999999999999999999888888777653
No 87
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.5e-44 Score=386.59 Aligned_cols=262 Identities=29% Similarity=0.542 Sum_probs=211.9
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.++|++++.||+|+||+||+|+++.+++.||+|++..... ......+.+|+.+++.++||||+++++++.+...+|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 3789999999999999999999999999999999875432 12234567899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|||+. ++|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---- 156 (303)
T cd07869 82 FEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP---- 156 (303)
T ss_pred EECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC----
Confidence 99996 5888877654 56899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+...
T Consensus 157 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 209 (303)
T cd07869 157 ---------------------------SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD 209 (303)
T ss_pred ---------------------------CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc
Confidence 001123578999999999876 4588999999999999999999999986432
Q ss_pred -hHHHHhhhccC-C----CCC------C---------CC---------CCCCHHHHHHHHHhccCCcCCcCCCCCHHHHH
Q 001783 826 -QQIFDNILNRK-I----PWP------R---------VP---------EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1013)
Q Consensus 826 -~ei~qkIl~~~-~----~~p------~---------lp---------~~lS~elkDLI~rMLqkDPekRPg~~TAeELL 875 (1013)
.+....+.... . .++ . .+ ...+..+.+||.+||+.||.+|| |+.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~---s~~~~l 286 (303)
T cd07869 210 IQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRL---SAQAAL 286 (303)
T ss_pred HHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhcc---CHHHHh
Confidence 22232222100 0 000 0 00 12457899999999999999999 999999
Q ss_pred hCCCCCCCChh
Q 001783 876 QHVFFKDINWD 886 (1013)
Q Consensus 876 qHPFFk~Idw~ 886 (1013)
+||||+++.+.
T Consensus 287 ~h~~f~~~~~~ 297 (303)
T cd07869 287 SHEYFSDLPPR 297 (303)
T ss_pred cCcccccCChh
Confidence 99999988653
No 88
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.4e-44 Score=388.61 Aligned_cols=263 Identities=29% Similarity=0.463 Sum_probs=212.9
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc-----ceE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR-----ENL 664 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~-----~~L 664 (1013)
+|++.+.||+|+||.||+|+++.+++.||||++..... .......+.+|+.+++.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 58999999999999999999999999999999875322 223345788999999999999999999887543 358
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+|||||. ++|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 158 (338)
T cd07859 80 YVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 158 (338)
T ss_pred EEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence 99999995 69999998888899999999999999999999999999999999999999999999999999873110000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc--CCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG--TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g--~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
........+||+.|+|||++.+ ..++.++|||||||++|||++|++||.+
T Consensus 159 ----------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~ 210 (338)
T cd07859 159 ----------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 210 (338)
T ss_pred ----------------------------ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 0011234689999999999876 6789999999999999999999999987
Q ss_pred CChhHHHHhhhc--------------------------cC--CCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHH
Q 001783 823 EHPQQIFDNILN--------------------------RK--IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1013)
Q Consensus 823 ~~~~ei~qkIl~--------------------------~~--~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeEL 874 (1013)
.+.......+.. .. .++......+++.+.+||.+||+.||.+|| +++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~e~ 287 (338)
T cd07859 211 KNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRP---TAEEA 287 (338)
T ss_pred CChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCC---CHHHH
Confidence 654333221111 00 001111134678899999999999999999 99999
Q ss_pred HhCCCCCCCCh
Q 001783 875 KQHVFFKDINW 885 (1013)
Q Consensus 875 LqHPFFk~Idw 885 (1013)
++||||+++..
T Consensus 288 l~hp~f~~~~~ 298 (338)
T cd07859 288 LADPYFKGLAK 298 (338)
T ss_pred hcCchhhhcCc
Confidence 99999987543
No 89
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.1e-43 Score=379.09 Aligned_cols=278 Identities=34% Similarity=0.601 Sum_probs=232.8
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
.|+..+.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.+|+.++|+||+.+++.+..++.+|+|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 37889999999999999999999999999999977654444445667889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 670 y~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|+++++|..++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~------ 154 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE------ 154 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCC------
Confidence 99999999888654 3699999999999999999999999999999999999999999999999998863100
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
........||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.....
T Consensus 155 --------------------------~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~ 208 (285)
T cd05632 155 --------------------------GESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV 208 (285)
T ss_pred --------------------------CCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 001123479999999999999899999999999999999999999998776544
Q ss_pred HHHhhhccCCC-CCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCccCCC
Q 001783 828 IFDNILNRKIP-WPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTS 899 (1013)
Q Consensus 828 i~qkIl~~~~~-~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfvP~~ 899 (1013)
....+...... ...++..++.++.+|+.+||+.||.+||+. ..+.+++.|+||+.++|+.+... .++|+|.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (285)
T cd05632 209 KREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFVPDP 285 (285)
T ss_pred HHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCcCCCCCCCCC
Confidence 43333221111 123456788999999999999999999932 12899999999999999987654 47888753
No 90
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.5e-43 Score=384.38 Aligned_cols=259 Identities=28% Similarity=0.483 Sum_probs=219.2
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.++|++++.||+|+||.||+|++..++..||+|++.... .......+.+|+++|+.++||||+++++++...+.+|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 478999999999999999999999999999999987542 234457789999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSL-RVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~-GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|||++||+|.+++.+.+.+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----- 156 (331)
T cd06649 82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----- 156 (331)
T ss_pred eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc-----
Confidence 99999999999998888899999999999999999999986 699999999999999999999999999863100
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+..
T Consensus 157 ----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~ 208 (331)
T cd06649 157 ----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK 208 (331)
T ss_pred ----------------------------cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0112357999999999999999999999999999999999999999766554
Q ss_pred HHHHhhhccC--------------------------------------------CCCCCC-CCCCCHHHHHHHHHhccCC
Q 001783 827 QIFDNILNRK--------------------------------------------IPWPRV-PEEMSPEAHDLIDRFLTED 861 (1013)
Q Consensus 827 ei~qkIl~~~--------------------------------------------~~~p~l-p~~lS~elkDLI~rMLqkD 861 (1013)
++...+.... ...+.. ...+++++.+||.+||++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~ 288 (331)
T cd06649 209 ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKN 288 (331)
T ss_pred HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCC
Confidence 4322211000 000111 1246889999999999999
Q ss_pred cCCcCCCCCHHHHHhCCCCCCCC
Q 001783 862 PHQRLGSGGASEVKQHVFFKDIN 884 (1013)
Q Consensus 862 PekRPg~~TAeELLqHPFFk~Id 884 (1013)
|++|| ++.+|++||||+...
T Consensus 289 P~~Rp---t~~ell~h~~~~~~~ 308 (331)
T cd06649 289 PAERA---DLKMLMNHTFIKRSE 308 (331)
T ss_pred cccCC---CHHHHhcChHHhhcc
Confidence 99999 999999999998643
No 91
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-44 Score=396.97 Aligned_cols=253 Identities=31% Similarity=0.612 Sum_probs=235.7
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
.+|++.+.||+|.||+|-+|.....|+.||||.+++..+..+...-++.+|++||..|+||||+.+|++|+..+.+.|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 46999999999999999999999999999999999999888888899999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||..+|+|++++.+.+.|++..++.+++||..|+.|||+++++|||||.+|||+|+++++||+||||+...
T Consensus 133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly--------- 203 (668)
T KOG0611|consen 133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLY--------- 203 (668)
T ss_pred EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhh---------
Confidence 99999999999999999999999999999999999999999999999999999999999999999998631
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCC-CccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH-GTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~y-s~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
.......++||+|.|.+||++.|.+| ++.+|-||||++||.|+.|..||.+.+...
T Consensus 204 -----------------------~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~ 260 (668)
T KOG0611|consen 204 -----------------------ADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR 260 (668)
T ss_pred -----------------------ccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH
Confidence 11233567999999999999999998 789999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 828 i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
+.++|..+.+.-|. -+.++.-||+.||-.||++|- |+++|..|=|.
T Consensus 261 lvrQIs~GaYrEP~----~PSdA~gLIRwmLmVNP~RRA---TieDiAsHWWv 306 (668)
T KOG0611|consen 261 LVRQISRGAYREPE----TPSDASGLIRWMLMVNPERRA---TIEDIASHWWV 306 (668)
T ss_pred HHHHhhcccccCCC----CCchHHHHHHHHHhcCcccch---hHHHHhhhhee
Confidence 99999988775443 456789999999999999999 99999999776
No 92
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.2e-44 Score=387.65 Aligned_cols=262 Identities=32% Similarity=0.543 Sum_probs=224.2
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--ce
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--EN 663 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~--~~ 663 (1013)
..+++|+.+..|++|+||.||+|+++.|+..||+|.++... .....--..++|+.+|.+++|||||.+.++.... +.
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~ 151 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDK 151 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccce
Confidence 45788999999999999999999999999999999997654 2222334567999999999999999999988765 46
Q ss_pred EEEEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 664 LYLVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g-~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
+|||||||.. ||..++.+.+ .|...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|+..
T Consensus 152 iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y--- 227 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREY--- 227 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhh---
Confidence 9999999987 9999998875 8999999999999999999999999999999999999999999999999999841
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
+ ......+..+-|.+|+|||.+.| ..|+.++|+||+|||+.||++++|.|.
T Consensus 228 ----------------g------------sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~ 279 (419)
T KOG0663|consen 228 ----------------G------------SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFP 279 (419)
T ss_pred ----------------c------------CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCC
Confidence 0 00122345688999999999998 459999999999999999999999999
Q ss_pred CCChhHHHHhhhccC-------------------CCCCCCC---------C-CCCHHHHHHHHHhccCCcCCcCCCCCHH
Q 001783 822 AEHPQQIFDNILNRK-------------------IPWPRVP---------E-EMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~-------------------~~~p~lp---------~-~lS~elkDLI~rMLqkDPekRPg~~TAe 872 (1013)
+.+..+.+.+|+... ..++..| . .+++...+|++.+|.+||.+|. ||+
T Consensus 280 G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~---tA~ 356 (419)
T KOG0663|consen 280 GKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRI---TAE 356 (419)
T ss_pred CCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccc---cHH
Confidence 999988888887621 1111111 1 1568999999999999999999 999
Q ss_pred HHHhCCCCCCC
Q 001783 873 EVKQHVFFKDI 883 (1013)
Q Consensus 873 ELLqHPFFk~I 883 (1013)
+.|+|+||.+.
T Consensus 357 ~~L~h~~F~e~ 367 (419)
T KOG0663|consen 357 DGLKHEYFRET 367 (419)
T ss_pred HhhcccccccC
Confidence 99999999874
No 93
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-43 Score=393.46 Aligned_cols=268 Identities=32% Similarity=0.539 Sum_probs=232.0
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
-...++|++...||.|..++||+|+.+.++.+||||++...+.. ...+.+.+|+..|..++||||++++.+|..+..+
T Consensus 22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~--~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~L 99 (516)
T KOG0582|consen 22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN--NDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSEL 99 (516)
T ss_pred CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh--hhHHHHHHHHHHhhhcCCCCcceEEEEEEeccee
Confidence 34567899999999999999999999999999999999876553 3378899999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 665 YLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
|+||.||.+|++.++++.. ..++|..+..++++++.||.|||.+|.||||||+.||||+.+|.|||+|||.+-... +
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~-~ 178 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLF-D 178 (516)
T ss_pred EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeec-c
Confidence 9999999999999999765 459999999999999999999999999999999999999999999999999875311 1
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc--CCCCccceeechhHHHHHHHhCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG--TGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g--~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
+|.+ . ....++++|||.|||||+++. .+|+.++||||||++..||.+|..||
T Consensus 179 ----------~G~R---------------~-~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf 232 (516)
T KOG0582|consen 179 ----------SGDR---------------Q-VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPF 232 (516)
T ss_pred ----------cCce---------------e-eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCc
Confidence 0100 0 111267899999999999754 67999999999999999999999999
Q ss_pred CCCChhHHHHhhhccCCCCCCC-------CCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCC
Q 001783 821 NAEHPQQIFDNILNRKIPWPRV-------PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~~~p~l-------p~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Id 884 (1013)
..-.+.+++-.-+++..+.+.. ...++..++.+|..||++||.+|| ||+++|+|+||+...
T Consensus 233 ~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRp---tAskLlkh~FFk~~k 300 (516)
T KOG0582|consen 233 SKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRP---TASKLLKHAFFKKAK 300 (516)
T ss_pred ccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCC---CHHHHhccHHHhhcc
Confidence 9988888877777776653321 124678899999999999999999 999999999998764
No 94
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=6.6e-44 Score=378.17 Aligned_cols=259 Identities=32% Similarity=0.565 Sum_probs=223.3
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|..+++||+|.||.||+|++..+|+.||||.++..+. ........++|+..|+.++|+||+.|+++|...+.+.||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~-kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA-KDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccc-ccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 568999999999999999999999999999999987643 2223356789999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|||+. +|..+|+.. -.++..+++.|+.+++.||+|||++.|+||||||.|+||+.+|.+||+|||+|+.....
T Consensus 81 Efm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p----- 154 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP----- 154 (318)
T ss_pred Eeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCC-----
Confidence 99987 999999765 46999999999999999999999999999999999999999999999999999952111
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
.......+-|.+|+|||.+.| ..|+..+|+||.|||+.||+-|.|-|.+.+.-
T Consensus 155 --------------------------~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi 208 (318)
T KOG0659|consen 155 --------------------------NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI 208 (318)
T ss_pred --------------------------CcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH
Confidence 011223388999999999998 56999999999999999999999999999988
Q ss_pred HHHHhhhccC-----CCCCC--------------------CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCC
Q 001783 827 QIFDNILNRK-----IPWPR--------------------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 827 ei~qkIl~~~-----~~~p~--------------------lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk 881 (1013)
+.+..|+... ..||. +....+.++.||+.+||..||.+|+ +|.|+|+|+||+
T Consensus 209 dQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Ri---ta~qaL~~~yf~ 285 (318)
T KOG0659|consen 209 DQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRI---TASQALKHPYFK 285 (318)
T ss_pred HHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcc---cHHHHhcchhhh
Confidence 8888876521 11221 1234678899999999999999999 999999999998
Q ss_pred CC
Q 001783 882 DI 883 (1013)
Q Consensus 882 ~I 883 (1013)
+.
T Consensus 286 ~~ 287 (318)
T KOG0659|consen 286 SL 287 (318)
T ss_pred cC
Confidence 63
No 95
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.8e-43 Score=372.63 Aligned_cols=255 Identities=32% Similarity=0.521 Sum_probs=208.5
Q ss_pred CCcEEEEEeeccCceEEEEEEECC-CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc---CCCCeeEEEeeeec----
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRT-TGDLFAIKVLKKADMIRKNAVESILAERDILISV---RNPFVVRFFYSFTC---- 660 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~-tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L---~HPNIVkL~e~fed---- 660 (1013)
++|++++.||+|+||+||+|++.. +++.||+|+++..... ......+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 369999999999999999999864 5688999998754322 12223455677777665 69999999998752
Q ss_pred -cceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcc
Q 001783 661 -RENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1013)
Q Consensus 661 -~~~LyLVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1013)
...+|+||||+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 456999999997 5999998754 458999999999999999999999999999999999999999999999999987
Q ss_pred ccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCC
Q 001783 738 VGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGI 817 (1013)
Q Consensus 738 ~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk 817 (1013)
.... ........||+.|+|||++.+..++.++|||||||++|||++|.
T Consensus 159 ~~~~--------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 206 (290)
T cd07862 159 IYSF--------------------------------QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 206 (290)
T ss_pred eccC--------------------------------CcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCC
Confidence 3100 01122457999999999999989999999999999999999999
Q ss_pred CCCCCCChhHHHHhhhccCC-----CCC-------------------CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHH
Q 001783 818 PPFNAEHPQQIFDNILNRKI-----PWP-------------------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1013)
Q Consensus 818 ~PF~g~~~~ei~qkIl~~~~-----~~p-------------------~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeE 873 (1013)
+||.+.+..+.+..+..... .++ .+...++..+.+||.+||+.||++|| ++.+
T Consensus 207 ~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---s~~~ 283 (290)
T cd07862 207 PLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI---SAYS 283 (290)
T ss_pred CCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcC---CHHH
Confidence 99998887777776654211 000 11235788899999999999999999 9999
Q ss_pred HHhCCCC
Q 001783 874 VKQHVFF 880 (1013)
Q Consensus 874 LLqHPFF 880 (1013)
+++||||
T Consensus 284 ~l~hp~f 290 (290)
T cd07862 284 ALSHPYF 290 (290)
T ss_pred HhcCCCC
Confidence 9999998
No 96
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.6e-42 Score=416.71 Aligned_cols=321 Identities=51% Similarity=0.911 Sum_probs=263.8
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
.+++|+++++||+|+||+||+|++..+++.||||++++...........+..|+.++..++||||+++++.+....++||
T Consensus 2 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 81 (669)
T cd05610 2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYL 81 (669)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEE
Confidence 36889999999999999999999999999999999987665556667788999999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
||||+.|++|.+++...+.+++..++.|+.||+.||+|||.+|||||||||+||||+.++++||+|||+++.........
T Consensus 82 VmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~~~~~ 161 (669)
T cd05610 82 VMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRELNM 161 (669)
T ss_pred EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccCCcccc
Confidence 99999999999999888889999999999999999999999999999999999999999999999999997421100000
Q ss_pred ---C----------------------------------------------------------------------------
Q 001783 747 ---L---------------------------------------------------------------------------- 747 (1013)
Q Consensus 747 ---l---------------------------------------------------------------------------- 747 (1013)
.
T Consensus 162 ~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (669)
T cd05610 162 MDILTTPSMAKPKNDYSRTPGQVLSLISSLGFNTPVGEKDQGSVNSGQNNGTSSVRTGTSHPLLMINKESLPMSLKLSKS 241 (669)
T ss_pred cccccCccccCccccccCCCCceeeeeeecCcCCccccccccccccccccccccccccCCCCcccccccccccccHhhhh
Confidence 0
Q ss_pred ---------CCCC--ccC--------------------------------------------------------------
Q 001783 748 ---------SGPA--VSG-------------------------------------------------------------- 754 (1013)
Q Consensus 748 ---------s~p~--~~g-------------------------------------------------------------- 754 (1013)
..+. ...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (669)
T cd05610 242 CLETSESSPSLPVRSLTPNLLKSRKRPEASTSSTHSCMTNSLSSCESECCSSNLKLLEQASSPSQSPRWSVDEGNIISEG 321 (669)
T ss_pred ccccccCCCCCCccccCcccccccccCCcccccchhhhhhhhhhccccccCcchhhhhhccCCCCCccccccCCCCcccc
Confidence 0000 000
Q ss_pred ------------------------------------------------------------------cccCC---------
Q 001783 755 ------------------------------------------------------------------TTLLG--------- 759 (1013)
Q Consensus 755 ------------------------------------------------------------------ttl~g--------- 759 (1013)
....+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (669)
T cd05610 322 EKSEKGSVKRSFELVEKSPCQELLQSKKTNAEYKRGCSITETNGNQSTGLTMEIQSLNLSKHKSRPKFLAGNEKRTGPKK 401 (669)
T ss_pred cccccCCccccccccccChHHHHhcccccccccccceeeccccccccccceeecchhhhhhhhcCchhhhccccccCccc
Confidence 00000
Q ss_pred -----------CC----------------C----------------cccchh------------h--h------------
Q 001783 760 -----------DE----------------E----------------PQLTAS------------E--H------------ 770 (1013)
Q Consensus 760 -----------d~----------------~----------------~~lt~s------------~--~------------ 770 (1013)
.. . ...+.. . .
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (669)
T cd05610 402 KSNPVVAKNLMCELDDDGEKDGKYSNSSTSCGDDREIVLKLSLNSDSSFPEMSKNAVAFRSYNSPINVSNVSEPSTMSSL 481 (669)
T ss_pred CCCcchhhhhhccccccccccCCccccccccCccHHHhhhhhhccccccccccccceeeeccCchhhccccCCCCccccc
Confidence 00 0 000000 0 0
Q ss_pred -h-----------------h-------------------------------hhhccccccCCCCCCCchhhccCCCCccc
Q 001783 771 -Q-----------------Q-------------------------------ERRKKRSAVGTPDYLAPEILLGTGHGTTA 801 (1013)
Q Consensus 771 -~-----------------~-------------------------------~~~~~~s~vGTp~YmAPEVL~g~~ys~ks 801 (1013)
. . ........+||+.|||||++.+..|+.++
T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~ 561 (669)
T cd05610 482 DAMKMSGSQSGSYPAITPTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAV 561 (669)
T ss_pred chhhccccccCCCcccCCCCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHH
Confidence 0 0 00001124789999999999999999999
Q ss_pred eeechhHHHHHHHhCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCC
Q 001783 802 DWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 802 DIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk 881 (1013)
|||||||+||||++|++||.+....+.+..++....+++.....++..+.+++.+||..||.+|| ++.++++||||.
T Consensus 562 DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~---ta~e~l~h~~~~ 638 (669)
T cd05610 562 DWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRA---GLKELKQHPLFH 638 (669)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHCc---CHHHHHhCHhhc
Confidence 99999999999999999999999999999998887777776678899999999999999999999 999999999999
Q ss_pred CCChhhHhhhcCCccCCCCCCCCCCCccc
Q 001783 882 DINWDTLARQKAAFVPTSESALDTSYFTS 910 (1013)
Q Consensus 882 ~Idw~~L~~~kppfvP~~~s~lDts~Fss 910 (1013)
.++|..+.....+|.|......|+.||..
T Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (669)
T cd05610 639 GVDWENLQNQTMPFIPQPDDETDTSYFEA 667 (669)
T ss_pred CCCHHHhcccCCCCCCCCCCccccccccc
Confidence 99999999989999999888888888864
No 97
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-44 Score=390.56 Aligned_cols=261 Identities=32% Similarity=0.505 Sum_probs=221.4
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec-----cce
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC-----REN 663 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed-----~~~ 663 (1013)
..|..++.||+|+||.|+.|.++.+|+.||||.+... ....-..++..+|+.+|+.++|+||+.+++.+.. -+.
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 3466689999999999999999999999999988643 2344556889999999999999999999999877 246
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
+|+|+|+|. -+|...|+.++.+++..++.+++||+.||+|+|+.||+||||||.|+|++.+..+||+|||+|+.....
T Consensus 101 vYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~- 178 (359)
T KOG0660|consen 101 VYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF- 178 (359)
T ss_pred eEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecccc-
Confidence 999999994 599999999888999999999999999999999999999999999999999999999999999942111
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
......+.++-|.+|+|||++.. ..|+.++||||+|||+.||++|++.|.|
T Consensus 179 ----------------------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG 230 (359)
T KOG0660|consen 179 ----------------------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPG 230 (359)
T ss_pred ----------------------------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCC
Confidence 01112345789999999999875 6799999999999999999999999999
Q ss_pred CChhHHHHhhhcc-----------------------C-----CCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHH
Q 001783 823 EHPQQIFDNILNR-----------------------K-----IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1013)
Q Consensus 823 ~~~~ei~qkIl~~-----------------------~-----~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeEL 874 (1013)
.+..+.++.|+.. . .+|..+.+..++.+.||+.+||..||.+|+ ||+|+
T Consensus 231 ~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRi---ta~eA 307 (359)
T KOG0660|consen 231 KDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRI---TAEEA 307 (359)
T ss_pred CchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccC---CHHHH
Confidence 8766666655541 1 111122357899999999999999999999 99999
Q ss_pred HhCCCCCCC
Q 001783 875 KQHVFFKDI 883 (1013)
Q Consensus 875 LqHPFFk~I 883 (1013)
|+||||...
T Consensus 308 L~hPYl~~~ 316 (359)
T KOG0660|consen 308 LAHPYLAPY 316 (359)
T ss_pred hcChhhhhh
Confidence 999999853
No 98
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.2e-42 Score=362.60 Aligned_cols=257 Identities=60% Similarity=1.066 Sum_probs=222.8
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHH-HhcCCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDIL-ISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL-~~L~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
+.||.|+||.||+|.+..+++.||+|++.+...........+..|..++ ...+||||+++++.+...+.+|+||||++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5689999999999999999999999999765543334444555665554 445899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
++|.+++...+.+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||+++...
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~------------- 148 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGL------------- 148 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceecc-------------
Confidence 9999999888889999999999999999999999999999999999999999999999999886310
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl 833 (1013)
......|++.|+|||.+.+..++.++||||||+++|+|++|.+||...+....+..+.
T Consensus 149 ----------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 206 (260)
T cd05611 149 ----------------------ENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNIL 206 (260)
T ss_pred ----------------------ccccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 0123468899999999998889999999999999999999999999888888887776
Q ss_pred ccCCCCCC-CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChh
Q 001783 834 NRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWD 886 (1013)
Q Consensus 834 ~~~~~~p~-lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~ 886 (1013)
.....++. ....+++++.++|.+||+.||.+||++.+++|++.||||++++|+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 207 SRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINWD 260 (260)
T ss_pred hcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCCC
Confidence 65544432 334689999999999999999999988788999999999999996
No 99
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1e-42 Score=368.30 Aligned_cols=254 Identities=30% Similarity=0.496 Sum_probs=206.9
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc---CCCCeeEEEeeeec-----c
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV---RNPFVVRFFYSFTC-----R 661 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L---~HPNIVkL~e~fed-----~ 661 (1013)
+|++++.||+|+||+||+|+++.+++.||+|+++..... ......+.+|+.+++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 489999999999999999999999999999998754321 11223445666666654 79999999998865 2
Q ss_pred ceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccc
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVG 739 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~ 739 (1013)
..+|+||||+.+ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 458999999975 899888764 34899999999999999999999999999999999999999999999999998731
Q ss_pred ccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCC
Q 001783 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPP 819 (1013)
Q Consensus 740 ~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~P 819 (1013)
.. ........||+.|+|||++.+..++.++|||||||++|+|++|.+|
T Consensus 159 ~~--------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~ 206 (288)
T cd07863 159 SC--------------------------------QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 206 (288)
T ss_pred cC--------------------------------cccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcC
Confidence 00 0011234789999999999998999999999999999999999999
Q ss_pred CCCCChhHHHHhhhccC-----CCCC-------------------CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHH
Q 001783 820 FNAEHPQQIFDNILNRK-----IPWP-------------------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1013)
Q Consensus 820 F~g~~~~ei~qkIl~~~-----~~~p-------------------~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELL 875 (1013)
|.+....+.+.++.... ..++ .....++..+.+||.+||++||.+|| ++.+++
T Consensus 207 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---t~~~~l 283 (288)
T cd07863 207 FCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRI---SAFRAL 283 (288)
T ss_pred cCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCC---CHHHHh
Confidence 98877766655554311 0000 11235788899999999999999999 999999
Q ss_pred hCCCC
Q 001783 876 QHVFF 880 (1013)
Q Consensus 876 qHPFF 880 (1013)
.||||
T Consensus 284 ~hp~f 288 (288)
T cd07863 284 QHPFF 288 (288)
T ss_pred cCCCC
Confidence 99998
No 100
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=9.9e-43 Score=386.65 Aligned_cols=261 Identities=29% Similarity=0.455 Sum_probs=218.0
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc-----eE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE-----NL 664 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~-----~L 664 (1013)
+|++++.||+|+||+||+|.+..+++.||||++.... ........+.+|+.+++.++||||+++++++.... .+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 5889999999999999999999999999999986532 22334567889999999999999999999998876 79
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+||||+. ++|...+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~- 157 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE- 157 (372)
T ss_pred EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCc-
Confidence 99999996 5899998887889999999999999999999999999999999999999999999999999987411000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
.......+||+.|+|||++.+. .++.++|||||||++|||++|++||.+.
T Consensus 158 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 208 (372)
T cd07853 158 -----------------------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQ 208 (372)
T ss_pred -----------------------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCC
Confidence 0011234689999999999874 4789999999999999999999999988
Q ss_pred ChhHHHHhhhcc-----------------------CCCCC------CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHH
Q 001783 824 HPQQIFDNILNR-----------------------KIPWP------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1013)
Q Consensus 824 ~~~ei~qkIl~~-----------------------~~~~p------~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeEL 874 (1013)
+..+.+..+... ....+ ......++++.+||.+||+.||.+|| ++.++
T Consensus 209 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~---t~~e~ 285 (372)
T cd07853 209 SPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRI---SAADA 285 (372)
T ss_pred CHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCc---CHHHH
Confidence 776655554321 11111 12345688999999999999999999 99999
Q ss_pred HhCCCCCCCCh
Q 001783 875 KQHVFFKDINW 885 (1013)
Q Consensus 875 LqHPFFk~Idw 885 (1013)
++||||.+..+
T Consensus 286 l~hp~~~~~~~ 296 (372)
T cd07853 286 LAHPYLDEGRL 296 (372)
T ss_pred hcCHhhCCCcc
Confidence 99999998654
No 101
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.4e-43 Score=394.10 Aligned_cols=256 Identities=27% Similarity=0.371 Sum_probs=209.7
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
+....+|++++.||+|+||.||+|++..+++.||+|+... ..+.+|+.+|+.++||||++++++|......
T Consensus 88 ~~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~ 158 (391)
T PHA03212 88 GIEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFT 158 (391)
T ss_pred ccccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCee
Confidence 3445679999999999999999999999999999997432 3467899999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+|||++. ++|..++...+.+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.....
T Consensus 159 ~lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~-- 235 (391)
T PHA03212 159 CLILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI-- 235 (391)
T ss_pred EEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccc--
Confidence 99999995 699999988788999999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
........+||+.|+|||++.+..|+.++|||||||++|||++|..||....
T Consensus 236 ----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~ 287 (391)
T PHA03212 236 ----------------------------NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKD 287 (391)
T ss_pred ----------------------------cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcc
Confidence 0011224689999999999999999999999999999999999998875421
Q ss_pred -------hhHHHHhhhccCCC--------------------------CCC-C-----CCCCCHHHHHHHHHhccCCcCCc
Q 001783 825 -------PQQIFDNILNRKIP--------------------------WPR-V-----PEEMSPEAHDLIDRFLTEDPHQR 865 (1013)
Q Consensus 825 -------~~ei~qkIl~~~~~--------------------------~p~-l-----p~~lS~elkDLI~rMLqkDPekR 865 (1013)
....+..+...... .+. . ...++.++.+||.+||++||.+|
T Consensus 288 ~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~R 367 (391)
T PHA03212 288 GLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHR 367 (391)
T ss_pred cccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhC
Confidence 11111111111000 000 0 01356789999999999999999
Q ss_pred CCCCCHHHHHhCCCCCCC
Q 001783 866 LGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 866 Pg~~TAeELLqHPFFk~I 883 (1013)
| ||+|+|+||||+.+
T Consensus 368 p---ta~elL~hp~f~~~ 382 (391)
T PHA03212 368 P---SAEALLDFAAFQDI 382 (391)
T ss_pred C---CHHHHhcChhhccC
Confidence 9 99999999999864
No 102
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.2e-42 Score=358.52 Aligned_cols=260 Identities=32% Similarity=0.543 Sum_probs=223.3
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc--cHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI--RKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~--~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
++|++.+.||.|+||.||.|.+..+++.||+|++...... .......+.+|+.+++.++||||+++++++.+.+.+|+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5699999999999999999999999999999998754322 22345678899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
||||++|++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||+++......
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~--- 158 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC--- 158 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccc---
Confidence 99999999999999888889999999999999999999999999999999999999999999999999987310000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
..........|+..|+|||++.+..++.++|||||||++|+|++|++||...+..
T Consensus 159 -------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 213 (263)
T cd06625 159 -------------------------SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM 213 (263)
T ss_pred -------------------------cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH
Confidence 0000112356889999999999988999999999999999999999999877665
Q ss_pred HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
....++..... .+.++..++..+.+||.+||.++|.+|| ++.++++||||
T Consensus 214 ~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~ll~~~~~ 263 (263)
T cd06625 214 AAIFKIATQPT-NPQLPSHVSPDARNFLRRTFVENAKKRP---SAEELLRHFFV 263 (263)
T ss_pred HHHHHHhccCC-CCCCCccCCHHHHHHHHHHhhcCcccCC---CHHHHhhCCCC
Confidence 55555544333 2446678999999999999999999999 99999999998
No 103
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=7.3e-43 Score=399.73 Aligned_cols=254 Identities=29% Similarity=0.442 Sum_probs=208.5
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc-------
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------- 661 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~------- 661 (1013)
.+|++++.||+|+||+||+|.+..+++.||||++.... ....+|+.+|+.++||||++++++|...
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 57999999999999999999999999999999886432 2234799999999999999998876432
Q ss_pred -ceEEEEEEeccCCChHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC-cEEEeecCC
Q 001783 662 -ENLYLVMEYLNGGDLYSLLR----NLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-HIKLTDFGL 735 (1013)
Q Consensus 662 -~~LyLVMEy~~GGSL~dlL~----~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG-~VKLiDFGL 735 (1013)
..+|+||||+++ +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 139 ~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 139 NIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred ceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence 257899999975 7777664 345799999999999999999999999999999999999999765 699999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHH
Q 001783 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELI 814 (1013)
Q Consensus 736 Ak~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELL 814 (1013)
|+.... .......+||+.|||||++.+. .|+.++|||||||++|||+
T Consensus 218 a~~~~~--------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell 265 (440)
T PTZ00036 218 AKNLLA--------------------------------GQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMI 265 (440)
T ss_pred chhccC--------------------------------CCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 973100 0112245789999999998764 6899999999999999999
Q ss_pred hCCCCCCCCChhHHHHhhhccC-----------------CCCCC---------CCCCCCHHHHHHHHHhccCCcCCcCCC
Q 001783 815 VGIPPFNAEHPQQIFDNILNRK-----------------IPWPR---------VPEEMSPEAHDLIDRFLTEDPHQRLGS 868 (1013)
Q Consensus 815 TGk~PF~g~~~~ei~qkIl~~~-----------------~~~p~---------lp~~lS~elkDLI~rMLqkDPekRPg~ 868 (1013)
+|.+||.+.+..+.+..+.... ..++. +|...++++.+||.+||++||.+||
T Consensus 266 tG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~-- 343 (440)
T PTZ00036 266 LGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRL-- 343 (440)
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCc--
Confidence 9999999887766655554311 11111 2345788999999999999999999
Q ss_pred CCHHHHHhCCCCCCCCh
Q 001783 869 GGASEVKQHVFFKDINW 885 (1013)
Q Consensus 869 ~TAeELLqHPFFk~Idw 885 (1013)
++.++|+||||.++..
T Consensus 344 -ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 344 -NPIEALADPFFDDLRD 359 (440)
T ss_pred -CHHHHhCChhHHhhhc
Confidence 9999999999987644
No 104
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.8e-42 Score=380.73 Aligned_cols=257 Identities=27% Similarity=0.470 Sum_probs=210.5
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc----
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE---- 662 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~---- 662 (1013)
.+++|++++.||+|+||.||+|.+..+|+.||+|++.+... .......+.+|+.+++.++||||++++++|....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 45789999999999999999999999999999999976432 2334567789999999999999999999987543
Q ss_pred --eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccc
Q 001783 663 --NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1013)
Q Consensus 663 --~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1013)
.+|+||||+.+ +|...+.. .+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 57999999976 67766643 48899999999999999999999999999999999999999999999999987310
Q ss_pred cCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001783 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 741 ~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
. ........||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus 175 ~--------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf 222 (359)
T cd07876 175 T--------------------------------NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIF 222 (359)
T ss_pred c--------------------------------CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence 0 00112357899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhhcc----------------------CCCCCC-----------------CCCCCCHHHHHHHHHhccCC
Q 001783 821 NAEHPQQIFDNILNR----------------------KIPWPR-----------------VPEEMSPEAHDLIDRFLTED 861 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~----------------------~~~~p~-----------------lp~~lS~elkDLI~rMLqkD 861 (1013)
.+.+....+..+... ...++. .....++++.+||.+||+.|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d 302 (359)
T cd07876 223 QGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVID 302 (359)
T ss_pred CCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccC
Confidence 877654433322211 111100 11124678999999999999
Q ss_pred cCCcCCCCCHHHHHhCCCCCC
Q 001783 862 PHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 862 PekRPg~~TAeELLqHPFFk~ 882 (1013)
|.+|| |+.|+|+||||..
T Consensus 303 P~~R~---t~~e~l~hp~~~~ 320 (359)
T cd07876 303 PDKRI---SVDEALRHPYITV 320 (359)
T ss_pred cccCC---CHHHHhcCchhhh
Confidence 99999 9999999999974
No 105
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3e-42 Score=364.71 Aligned_cols=266 Identities=36% Similarity=0.697 Sum_probs=223.6
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCCCh
Q 001783 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1013)
Q Consensus 597 LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL 676 (1013)
||+|+||+||+|.+..+|+.||+|++.+...........+.+|+.+|+.++||||+++++.+...+.+|+||||++|++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999999999999999999865544444556778899999999999999999999999999999999999999
Q ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccC
Q 001783 677 YSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSG 754 (1013)
Q Consensus 677 ~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~g 754 (1013)
.+++.+.+ .+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++.....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~------------- 147 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG------------- 147 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc-------------
Confidence 99997765 699999999999999999999999999999999999999999999999998863100
Q ss_pred cccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh----hHHHH
Q 001783 755 TTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP----QQIFD 830 (1013)
Q Consensus 755 ttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~----~ei~q 830 (1013)
........|+..|+|||++.+..++.++|||||||++|+|++|+.||..... ..+..
T Consensus 148 -------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 208 (277)
T cd05577 148 -------------------GKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR 208 (277)
T ss_pred -------------------CCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh
Confidence 0011234688899999999988899999999999999999999999976543 22222
Q ss_pred hhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhh--cCCccC
Q 001783 831 NILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVP 897 (1013)
Q Consensus 831 kIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~--kppfvP 897 (1013)
.+.... ...+..+++++.+||.+||+.||.+||+. .++.++++||||+.++|..+... .+||.|
T Consensus 209 ~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~ 276 (277)
T cd05577 209 RTLEMA---VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGMLEPPFIP 276 (277)
T ss_pred cccccc---ccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhhcCCCCCCCCC
Confidence 222222 23456789999999999999999999975 27899999999999999988654 355544
No 106
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.8e-44 Score=380.27 Aligned_cols=261 Identities=30% Similarity=0.523 Sum_probs=233.3
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeecccc-----ccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeecc
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM-----IRKNAVESILAERDILISV-RNPFVVRFFYSFTCR 661 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~-----~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~ 661 (1013)
.+.|+-.+.||.|..++|..|.++.+|+.+|+|++..... ...+..+....|+.||+++ .||+|+++.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 3568888999999999999999999999999999864321 1234456778899999987 699999999999999
Q ss_pred ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
..+++|+|.|+.|.|++++...-.+++...+.+|+||+.|++|||.++||||||||+|||++++.++||+|||+|...
T Consensus 96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l-- 173 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL-- 173 (411)
T ss_pred chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc--
Confidence 999999999999999999998888999999999999999999999999999999999999999999999999998731
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc------CCCCccceeechhHHHHHHHh
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG------TGHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g------~~ys~ksDIWSLGVILYELLT 815 (1013)
..+.+.+..||||+|+|||.+.. .+|+..+|+||+|||||.||.
T Consensus 174 ------------------------------~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLa 223 (411)
T KOG0599|consen 174 ------------------------------EPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLA 223 (411)
T ss_pred ------------------------------CCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHc
Confidence 12344567899999999999863 468999999999999999999
Q ss_pred CCCCCCCCChhHHHHhhhccCCCCCC-CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 816 GIPPFNAEHPQQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 816 Gk~PF~g~~~~ei~qkIl~~~~~~p~-lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
|.+||+.....-+++.|+.+++.|.. -+.++|...+|||++||+.||.+|+ |++|+|+||||..+
T Consensus 224 GcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ri---take~LaHpff~q~ 289 (411)
T KOG0599|consen 224 GCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRI---TAKEALAHPFFIQI 289 (411)
T ss_pred CCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcc---cHHHHhcChHHHHH
Confidence 99999999999999999999988753 3568999999999999999999999 99999999999644
No 107
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.3e-42 Score=398.83 Aligned_cols=253 Identities=25% Similarity=0.409 Sum_probs=204.4
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC------CCeeEEEeeeecc
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN------PFVVRFFYSFTCR 661 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~H------PNIVkL~e~fed~ 661 (1013)
.++|+++++||+|+||+||+|.+..+++.||||+++... ........|+.++..++| ++|++++++|...
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 367999999999999999999999999999999996432 122344567777766644 5689999888765
Q ss_pred -ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCC-------------
Q 001783 662 -ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDG------------- 726 (1013)
Q Consensus 662 -~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG------------- 726 (1013)
.++|+|||++ |++|.+++.+.+.+++..++.++.||+.||+|||+ .|||||||||+|||++.++
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence 5799999988 77999999888889999999999999999999997 6999999999999998765
Q ss_pred ---cEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCcccee
Q 001783 727 ---HIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADW 803 (1013)
Q Consensus 727 ---~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDI 803 (1013)
.+||+|||++... .......+||+.|||||++.+..|+.++||
T Consensus 283 ~~~~vkl~DfG~~~~~----------------------------------~~~~~~~~gt~~Y~APE~~~~~~~~~~~Di 328 (467)
T PTZ00284 283 DPCRVRICDLGGCCDE----------------------------------RHSRTAIVSTRHYRSPEVVLGLGWMYSTDM 328 (467)
T ss_pred CCceEEECCCCccccC----------------------------------ccccccccCCccccCcHHhhcCCCCcHHHH
Confidence 4999999987520 001234689999999999999999999999
Q ss_pred echhHHHHHHHhCCCCCCCCChhHHHHhhhccCCCCCC------------------------C-C--------------C
Q 001783 804 WSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPR------------------------V-P--------------E 844 (1013)
Q Consensus 804 WSLGVILYELLTGk~PF~g~~~~ei~qkIl~~~~~~p~------------------------l-p--------------~ 844 (1013)
|||||++|||++|++||.+.+..+....+......+|. . + .
T Consensus 329 wSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (467)
T PTZ00284 329 WSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREV 408 (467)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhh
Confidence 99999999999999999887765544433221111100 0 0 0
Q ss_pred CCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 845 EMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 845 ~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
..++.+.|||.+||++||.+|| +|+|+|+||||..
T Consensus 409 ~~~~~~~dli~~mL~~dP~~R~---ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 409 IRDDLLCDLIYGLLHYDRQKRL---NARQMTTHPYVLK 443 (467)
T ss_pred hchHHHHHHHHHhCCcChhhCC---CHHHHhcCccccc
Confidence 1145678999999999999999 9999999999975
No 108
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-42 Score=389.11 Aligned_cols=253 Identities=32% Similarity=0.541 Sum_probs=217.5
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCE-EEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc-e
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDL-FAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE-N 663 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~-VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~-~ 663 (1013)
...++..+.+.||.|+||+||.+.++ |.. ||+|++......... .+.+.+|+.+|.+++|||||++++++.... .
T Consensus 38 i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~ 114 (362)
T KOG0192|consen 38 IDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGS 114 (362)
T ss_pred cChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 33455677777999999999999986 454 999999876654444 789999999999999999999999999987 7
Q ss_pred EEEEEEeccCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCCCceeecCCC-cEEEeecCCcccc
Q 001783 664 LYLVMEYLNGGDLYSLLRN--LGCLDEDVARVYIAEVVLALEYLHSLR-VVHRDLKPDNLLIAHDG-HIKLTDFGLSKVG 739 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~--~g~LsE~~ar~Ia~QIL~ALeYLHs~G-IIHRDIKPeNILLd~dG-~VKLiDFGLAk~~ 739 (1013)
++|||||+++|+|..++.+ .+.++...+..++.||+.||+|||+++ ||||||||+|||++.++ ++||+|||+++..
T Consensus 115 ~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~ 194 (362)
T KOG0192|consen 115 LCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREK 194 (362)
T ss_pred eEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceee
Confidence 9999999999999999987 578999999999999999999999999 99999999999999998 9999999999841
Q ss_pred ccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc--cCCCCccceeechhHHHHHHHhCC
Q 001783 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL--GTGHGTTADWWSVGIILFELIVGI 817 (1013)
Q Consensus 740 ~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~--g~~ys~ksDIWSLGVILYELLTGk 817 (1013)
... ........||+.|||||++. +..|+.++||||||+++|||+||+
T Consensus 195 ~~~-------------------------------~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~ 243 (362)
T KOG0192|consen 195 VIS-------------------------------KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGE 243 (362)
T ss_pred ccc-------------------------------cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCC
Confidence 100 01122368999999999999 669999999999999999999999
Q ss_pred CCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 818 PPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 818 ~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.||......+....+..... .|.+|..+++.+..||.+||..||.+|| +..+++.
T Consensus 244 ~Pf~~~~~~~~~~~v~~~~~-Rp~~p~~~~~~l~~l~~~CW~~dp~~RP---~f~ei~~ 298 (362)
T KOG0192|consen 244 IPFEDLAPVQVASAVVVGGL-RPPIPKECPPHLSSLMERCWLVDPSRRP---SFLEIVS 298 (362)
T ss_pred CCCCCCCHHHHHHHHHhcCC-CCCCCccCCHHHHHHHHHhCCCCCCcCC---CHHHHHH
Confidence 99999888666666654443 3667778999999999999999999999 6666554
No 109
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.2e-42 Score=383.26 Aligned_cols=257 Identities=30% Similarity=0.488 Sum_probs=211.8
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
...+++|+.++.||+|+||+||+|++..+++.||||++.... .......+.+|+.+++.++|+||+++++++...+.+
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEI 147 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeE
Confidence 345678999999999999999999999999999999986542 234456788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+||||+.+|+|... ...++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 148 ~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~-- 221 (353)
T PLN00034 148 QVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT-- 221 (353)
T ss_pred EEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc--
Confidence 999999999998643 34578888999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHHHHHHhCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIILFELIVGIPP 819 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLTGk~P 819 (1013)
.......+||+.|+|||++.. ..++.++|||||||++|||++|+.|
T Consensus 222 -----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~p 272 (353)
T PLN00034 222 -----------------------------MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFP 272 (353)
T ss_pred -----------------------------cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCC
Confidence 001123579999999999853 2345789999999999999999999
Q ss_pred CCCCChhH---HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 820 FNAEHPQQ---IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 820 F~g~~~~e---i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
|......+ ....+... ..+..+..++.++.+||.+||+.||.+|| ++.|+++||||..-
T Consensus 273 f~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~P~~Rp---t~~ell~hp~~~~~ 334 (353)
T PLN00034 273 FGVGRQGDWASLMCAICMS--QPPEAPATASREFRHFISCCLQREPAKRW---SAMQLLQHPFILRA 334 (353)
T ss_pred CCCCCCccHHHHHHHHhcc--CCCCCCCccCHHHHHHHHHHccCChhhCc---CHHHHhcCcccccC
Confidence 97443322 22222221 12345567899999999999999999999 99999999999863
No 110
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.1e-42 Score=372.61 Aligned_cols=260 Identities=27% Similarity=0.522 Sum_probs=215.1
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
.+++|++++.||+|+||+||+|+++.+++.||+|+++.... ......+.+|+.+++.++||||+++++++..++..|+
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 81 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTL 81 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEE
Confidence 35789999999999999999999999999999999875432 2223456789999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 667 VMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
||||+.+ +|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 157 (309)
T cd07872 82 VFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVP--- 157 (309)
T ss_pred EEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCC---
Confidence 9999975 888888654 45899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+
T Consensus 158 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 209 (309)
T cd07872 158 ----------------------------TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGST 209 (309)
T ss_pred ----------------------------ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 001123468999999999876 458999999999999999999999998877
Q ss_pred hhHHHHhhhccC-------------------CCCCC--------CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 825 PQQIFDNILNRK-------------------IPWPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 825 ~~ei~qkIl~~~-------------------~~~p~--------lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
..+....+.... ..++. ....+++++.+||.+||+.||.+|| |+.++++|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~---t~~e~l~h 286 (309)
T cd07872 210 VEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRI---SAEEAMKH 286 (309)
T ss_pred hHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCC---CHHHHhcC
Confidence 655544443210 00111 1134788999999999999999999 99999999
Q ss_pred CCCCCC
Q 001783 878 VFFKDI 883 (1013)
Q Consensus 878 PFFk~I 883 (1013)
|||+.+
T Consensus 287 ~~~~~~ 292 (309)
T cd07872 287 AYFRSL 292 (309)
T ss_pred hhhhhc
Confidence 999864
No 111
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.5e-42 Score=376.96 Aligned_cols=256 Identities=29% Similarity=0.523 Sum_probs=216.8
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.++|++.++||.|+||.||+|.+..++..+|+|++.... .......+.+|+++++.++||||++++++|.+.+++|+|
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 478999999999999999999999999999999987542 234456788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSL-RVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~-GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|||++||+|.+++.+.+.+++..+..++.||+.||.|||+. +|+||||||+|||++.+|.+||+|||++....
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~------ 155 (333)
T cd06650 82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI------ 155 (333)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhh------
Confidence 99999999999998888899999999999999999999975 79999999999999999999999999986310
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 156 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 208 (333)
T cd06650 156 ---------------------------DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK 208 (333)
T ss_pred ---------------------------hhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 00112357999999999999988999999999999999999999999765543
Q ss_pred HHHHhh--------------------------------------------hccCCCCCCCC-CCCCHHHHHHHHHhccCC
Q 001783 827 QIFDNI--------------------------------------------LNRKIPWPRVP-EEMSPEAHDLIDRFLTED 861 (1013)
Q Consensus 827 ei~qkI--------------------------------------------l~~~~~~p~lp-~~lS~elkDLI~rMLqkD 861 (1013)
+....+ .... .+..+ ..++.++.+||.+||++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~~ 286 (333)
T cd06650 209 ELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEP--PPKLPSGVFGAEFQDFVNKCLIKN 286 (333)
T ss_pred HHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCC--CccCCCCCcCHHHHHHHHHhccCC
Confidence 332111 1110 01111 236788999999999999
Q ss_pred cCCcCCCCCHHHHHhCCCCCCC
Q 001783 862 PHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 862 PekRPg~~TAeELLqHPFFk~I 883 (1013)
|.+|| ++.++++||||+..
T Consensus 287 P~~Rp---t~~ell~h~~~~~~ 305 (333)
T cd06650 287 PAERA---DLKQLMVHAFIKRS 305 (333)
T ss_pred cccCc---CHHHHhhCHHHhcC
Confidence 99999 99999999999854
No 112
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.9e-42 Score=365.83 Aligned_cols=261 Identities=39% Similarity=0.689 Sum_probs=212.4
Q ss_pred EeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHH---hcCCCCeeEEEeeeeccceEEEEEEecc
Q 001783 596 PISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILI---SVRNPFVVRFFYSFTCRENLYLVMEYLN 672 (1013)
Q Consensus 596 ~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~---~L~HPNIVkL~e~fed~~~LyLVMEy~~ 672 (1013)
.||+|+||.||+|.+..+++.||+|++.+.............+|..++. ..+||||+.+++.+...+..|+||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999999999999999997654332332333445544443 3479999999999999999999999999
Q ss_pred CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCc
Q 001783 673 GGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAV 752 (1013)
Q Consensus 673 GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~ 752 (1013)
||+|..++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.... .
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~-~---------- 149 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS-K---------- 149 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecc-c----------
Confidence 99999999888889999999999999999999999999999999999999999999999999986210 0
Q ss_pred cCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc-cCCCCccceeechhHHHHHHHhCCCCCCCCCh---hHH
Q 001783 753 SGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-GTGHGTTADWWSVGIILFELIVGIPPFNAEHP---QQI 828 (1013)
Q Consensus 753 ~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~-g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~---~ei 828 (1013)
.......||+.|+|||++. +..++.++|||||||++|+|++|..||..... ...
T Consensus 150 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~ 207 (279)
T cd05633 150 ----------------------KKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 207 (279)
T ss_pred ----------------------cCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHH
Confidence 0011246999999999987 46689999999999999999999999975432 221
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhhhc
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQK 892 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~~k 892 (1013)
........ ..++..++.++.+||.+||..||.+|++. .++.++++||||++++|......+
T Consensus 208 ~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 270 (279)
T cd05633 208 DRMTLTVN---VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYLQK 270 (279)
T ss_pred HHHhhcCC---cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHHhcCC
Confidence 11111111 24566789999999999999999999953 269999999999999999886543
No 113
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.5e-42 Score=365.35 Aligned_cols=266 Identities=32% Similarity=0.571 Sum_probs=227.0
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
+.|++++.||.|+||.||+|++..+++.||+|++... .......+.+|+.+++.++||||+++++.+.....+|+||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 5699999999999999999999999999999998754 2345677889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||++|++|..++.+ ...+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 89 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~----- 163 (292)
T cd06644 89 EFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT----- 163 (292)
T ss_pred ecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc-----
Confidence 99999999988765 356899999999999999999999999999999999999999999999999987631000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
........|++.|+|||++. ...++.++|||||||++|+|++|.+||..
T Consensus 164 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 217 (292)
T cd06644 164 --------------------------LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 217 (292)
T ss_pred --------------------------ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcc
Confidence 00112356889999999985 34468899999999999999999999988
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhh
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQ 891 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~ 891 (1013)
.+....+.++.....+....+..++.++.+||.+||..||.+|| +++++++||||..++|....+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~~~~~~~~~~~ 283 (292)
T cd06644 218 LNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRP---SAAQLLEHPFVSSVTSNRPLRE 283 (292)
T ss_pred ccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCc---CHHHHhcCccccccccchhHHH
Confidence 77766666665544333334567889999999999999999999 9999999999999999875543
No 114
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.3e-42 Score=379.22 Aligned_cols=257 Identities=26% Similarity=0.438 Sum_probs=212.4
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc-----
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR----- 661 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~----- 661 (1013)
.+++|++++.||+|+||.||+|.+..+++.||||++.+... .......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc-CchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 35789999999999999999999999999999999875432 233456778999999999999999999887654
Q ss_pred -ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccc
Q 001783 662 -ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1013)
Q Consensus 662 -~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1013)
..+|+||||+.+ +|...+.. .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 358999999975 78777754 48899999999999999999999999999999999999999999999999987310
Q ss_pred cCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001783 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 741 ~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
. ........||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus 178 ~--------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf 225 (364)
T cd07875 178 T--------------------------------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225 (364)
T ss_pred C--------------------------------CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCC
Confidence 0 00112357899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhhccCCC----------------------C---------C--------CCCCCCCHHHHHHHHHhccCC
Q 001783 821 NAEHPQQIFDNILNRKIP----------------------W---------P--------RVPEEMSPEAHDLIDRFLTED 861 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~~----------------------~---------p--------~lp~~lS~elkDLI~rMLqkD 861 (1013)
.+.+..+.+..++..... + + ......+..+++||.+||+.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~d 305 (364)
T cd07875 226 PGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305 (364)
T ss_pred CCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcC
Confidence 988776666555431110 0 0 001123567899999999999
Q ss_pred cCCcCCCCCHHHHHhCCCCCC
Q 001783 862 PHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 862 PekRPg~~TAeELLqHPFFk~ 882 (1013)
|.+|| |+.++|+||||..
T Consensus 306 P~~R~---t~~e~L~hp~~~~ 323 (364)
T cd07875 306 ASKRI---SVDEALQHPYINV 323 (364)
T ss_pred cccCC---CHHHHhcCccccc
Confidence 99999 9999999999973
No 115
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=6.6e-42 Score=357.36 Aligned_cols=257 Identities=40% Similarity=0.806 Sum_probs=223.3
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCCCh
Q 001783 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1013)
Q Consensus 597 LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL 676 (1013)
||.|+||.||+|.+..+++.||+|++.+.........+.+.+|+.+++.++||||+++++.+.+...+|+||||++|++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999999999999999999876554455667899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcc
Q 001783 677 YSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTT 756 (1013)
Q Consensus 677 ~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gtt 756 (1013)
.+++.+...+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||+++.....
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~-------------- 146 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG-------------- 146 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc--------------
Confidence 999988888999999999999999999999999999999999999999999999999998731000
Q ss_pred cCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC--hhHHHHhhhc
Q 001783 757 LLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH--PQQIFDNILN 834 (1013)
Q Consensus 757 l~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~--~~ei~qkIl~ 834 (1013)
.......|++.|+|||++.+..++.++|+||||+++|+|++|..||.... ..+.+..+..
T Consensus 147 ------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 208 (262)
T cd05572 147 ------------------QKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILK 208 (262)
T ss_pred ------------------cccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhc
Confidence 01123578999999999988889999999999999999999999998776 6666666664
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChh
Q 001783 835 RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWD 886 (1013)
Q Consensus 835 ~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~ 886 (1013)
... .+..|...+.++.+||.+||+.||.+||+. ..+.|+++||||++.+|+
T Consensus 209 ~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 209 GNG-KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred cCC-CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 222 234556678999999999999999999931 239999999999999986
No 116
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=6.3e-42 Score=353.73 Aligned_cols=265 Identities=62% Similarity=1.116 Sum_probs=227.0
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCCCh
Q 001783 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1013)
Q Consensus 597 LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL 676 (1013)
||.|+||.||+|++..+|+.||+|++...........+.+.+|++++..++||||+++++.+......|+||||++|++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999999999999999876554456678899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcc
Q 001783 677 YSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTT 756 (1013)
Q Consensus 677 ~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gtt 756 (1013)
.+++.+.+.+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++...........
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~--------- 151 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL--------- 151 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc---------
Confidence 99998878899999999999999999999999999999999999999999999999999874211100000
Q ss_pred cCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhccC
Q 001783 757 LLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRK 836 (1013)
Q Consensus 757 l~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~~~ 836 (1013)
...........++..|+|||++.+..++.++|+||||+++|+|++|..||......+.+..+....
T Consensus 152 --------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~ 217 (265)
T cd05579 152 --------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGK 217 (265)
T ss_pred --------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC
Confidence 000011234578899999999998889999999999999999999999999988888888887755
Q ss_pred CCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCCh
Q 001783 837 IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINW 885 (1013)
Q Consensus 837 ~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw 885 (1013)
..++.. ..++..+.+||.+||+.+|.+||+..++.++++||||++++|
T Consensus 218 ~~~~~~-~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 218 IEWPED-VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGIDW 265 (265)
T ss_pred cCCCcc-ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCCC
Confidence 554432 225899999999999999999995555599999999999998
No 117
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-44 Score=399.27 Aligned_cols=258 Identities=32% Similarity=0.583 Sum_probs=232.1
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
..|..++.||+|+||.||+|.+..+++.||+|++.... ....++.+..|+.+|..++++||.++|+.|..+..++++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 34888899999999999999999999999999998654 3456788999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
|||.||++.+.++..+.+.+..+..++++++.||.|||.++.||||||+.|||+..+|.+||+|||.+-..
T Consensus 91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql--------- 161 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQL--------- 161 (467)
T ss_pred HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeee---------
Confidence 99999999999998777799999999999999999999999999999999999999999999999998631
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
.....++.+++|||.||||||+.+.+|+.++||||||++.|||++|.|||....+...
T Consensus 162 ----------------------~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv 219 (467)
T KOG0201|consen 162 ----------------------TNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV 219 (467)
T ss_pred ----------------------echhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE
Confidence 0112334789999999999999999999999999999999999999999998888666
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCC
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Id 884 (1013)
+..|-+..+ |.+...+|+.+++||..||.+||+.|| +|.++|+|+|++...
T Consensus 220 lflIpk~~P--P~L~~~~S~~~kEFV~~CL~k~P~~Rp---sA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 220 LFLIPKSAP--PRLDGDFSPPFKEFVEACLDKNPEFRP---SAKELLKHKFIKRAK 270 (467)
T ss_pred EEeccCCCC--CccccccCHHHHHHHHHHhhcCcccCc---CHHHHhhhHHHHhcC
Confidence 666655544 456668999999999999999999999 999999999998754
No 118
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=5.8e-42 Score=377.19 Aligned_cols=257 Identities=26% Similarity=0.440 Sum_probs=210.4
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc-----
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR----- 661 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~----- 661 (1013)
.+++|++++.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||++++++|...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 45789999999999999999999999999999999875432 233456778999999999999999999988654
Q ss_pred -ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccc
Q 001783 662 -ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1013)
Q Consensus 662 -~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1013)
..+|+||||+++ +|...+.. .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 357999999976 67777654 48899999999999999999999999999999999999999999999999987310
Q ss_pred cCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001783 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 741 ~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
. ........||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus 171 ~--------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf 218 (355)
T cd07874 171 T--------------------------------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218 (355)
T ss_pred C--------------------------------ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 0 00112357899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhhccC----------------------CC-----CC------------CCCCCCCHHHHHHHHHhccCC
Q 001783 821 NAEHPQQIFDNILNRK----------------------IP-----WP------------RVPEEMSPEAHDLIDRFLTED 861 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~----------------------~~-----~p------------~lp~~lS~elkDLI~rMLqkD 861 (1013)
.+.+..+.+..+.... .. ++ ..+...+.++.+||.+||+.|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d 298 (355)
T cd07874 219 PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 298 (355)
T ss_pred CCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCC
Confidence 8876544443332210 00 00 011224568899999999999
Q ss_pred cCCcCCCCCHHHHHhCCCCCC
Q 001783 862 PHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 862 PekRPg~~TAeELLqHPFFk~ 882 (1013)
|.+|| |+.|+++||||..
T Consensus 299 P~~Rp---s~~ell~hp~~~~ 316 (355)
T cd07874 299 PAKRI---SVDEALQHPYINV 316 (355)
T ss_pred chhcC---CHHHHhcCcchhc
Confidence 99999 9999999999973
No 119
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.9e-42 Score=377.38 Aligned_cols=256 Identities=28% Similarity=0.459 Sum_probs=211.3
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc------
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------ 661 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~------ 661 (1013)
.++|++++.||.|+||+||+|.+..+++.||+|++.+... .......+.+|+.+|+.++||||++++++|...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 3679999999999999999999999999999999876432 223345677899999999999999999888643
Q ss_pred ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
...|++||++ |++|..++.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~- 169 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD- 169 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC-
Confidence 3579999988 7799887754 569999999999999999999999999999999999999999999999999987310
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
......+||+.|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus 170 ---------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf 216 (343)
T cd07878 170 ---------------------------------DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALF 216 (343)
T ss_pred ---------------------------------CCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCC
Confidence 01123578999999999987 56899999999999999999999999
Q ss_pred CCCChhHHHHhhhccCC--------------------CCCC--------CCCCCCHHHHHHHHHhccCCcCCcCCCCCHH
Q 001783 821 NAEHPQQIFDNILNRKI--------------------PWPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~--------------------~~p~--------lp~~lS~elkDLI~rMLqkDPekRPg~~TAe 872 (1013)
.+.+..+.+..+..... .++. .....++.+.+||.+||+.||.+|| |+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~---s~~ 293 (343)
T cd07878 217 PGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRI---SAS 293 (343)
T ss_pred CCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCC---CHH
Confidence 87765554444432110 0011 1124567889999999999999999 999
Q ss_pred HHHhCCCCCCC
Q 001783 873 EVKQHVFFKDI 883 (1013)
Q Consensus 873 ELLqHPFFk~I 883 (1013)
++++||||...
T Consensus 294 ell~hp~~~~~ 304 (343)
T cd07878 294 EALAHPYFSQY 304 (343)
T ss_pred HHhcCcchhcc
Confidence 99999999864
No 120
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1e-41 Score=393.75 Aligned_cols=259 Identities=28% Similarity=0.427 Sum_probs=224.0
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCC-CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTT-GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~t-gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
...|.+.+.||+|+||.||+|.+..+ +..||+|.+... .......+.+|+.+|+.++||||++++++|...+++||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEE
Confidence 34599999999999999999998877 788999976543 23444677889999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 667 VMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
||||++||+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 9999999999988753 346899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
. ........+||+.|+|||++.+..++.++|||||||++|||++|+.||.+
T Consensus 223 -~----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~ 273 (478)
T PTZ00267 223 -V----------------------------SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKG 273 (478)
T ss_pred -c----------------------------ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 0 00112346899999999999999999999999999999999999999999
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
.+..+++..+..... +..+..++.++.+||.+||+.||.+|| ++.+++.|+|++.+
T Consensus 274 ~~~~~~~~~~~~~~~--~~~~~~~s~~~~~li~~~L~~dP~~Rp---s~~~~l~~~~~~~~ 329 (478)
T PTZ00267 274 PSQREIMQQVLYGKY--DPFPCPVSSGMKALLDPLLSKNPALRP---TTQQLLHTEFLKYV 329 (478)
T ss_pred CCHHHHHHHHHhCCC--CCCCccCCHHHHHHHHHHhccChhhCc---CHHHHHhCHHHHHH
Confidence 888888888876544 234567899999999999999999999 99999999999743
No 121
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.6e-41 Score=350.58 Aligned_cols=254 Identities=27% Similarity=0.538 Sum_probs=219.3
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc-ceEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR-ENLYLVM 668 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~-~~LyLVM 668 (1013)
+|++++.||+|+||.||++.++.+++.||+|.+..... .....+.+.+|+.+++.++||||+++++.+... ..+|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 59999999999999999999999999999999875432 233456788999999999999999999988754 4689999
Q ss_pred EeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 669 EYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
||+++++|.+++... ..+++.++..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~---- 155 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ---- 155 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEeccc----
Confidence 999999999999753 45899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
........|++.|+|||++.+..++.++|||||||++|+|++|+.||...+..
T Consensus 156 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~ 208 (257)
T cd08223 156 ---------------------------CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN 208 (257)
T ss_pred ---------------------------CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH
Confidence 00122457899999999999999999999999999999999999999988777
Q ss_pred HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
.....+..... +..+..+++.+.+||.+||+.||.+|| ++.++++||||
T Consensus 209 ~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~~l~~~~~ 257 (257)
T cd08223 209 SLVYRIIEGKL--PPMPKDYSPELGELIATMLSKRPEKRP---SVKSILRQPYI 257 (257)
T ss_pred HHHHHHHhcCC--CCCccccCHHHHHHHHHHhccCcccCC---CHHHHhcCCCC
Confidence 76666655443 345667899999999999999999999 99999999998
No 122
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.3e-42 Score=357.59 Aligned_cols=255 Identities=37% Similarity=0.649 Sum_probs=214.7
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEe
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy 670 (1013)
|++++.||+|+||+||+|++..+++.||+|++......... .....+|+.+++.++||||+++++++.....+|+||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE-REENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH-HHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc-cchhhhhhhccccccccccccccccccccccccccccc
Confidence 89999999999999999999999999999999876543322 23445699999999999999999999999999999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCC
Q 001783 671 LNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGP 750 (1013)
Q Consensus 671 ~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p 750 (1013)
+.+++|.+++.+.+.+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++....
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~---------- 149 (260)
T PF00069_consen 80 CPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS---------- 149 (260)
T ss_dssp ETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST----------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------
Confidence 9999999999977889999999999999999999999999999999999999999999999999986310
Q ss_pred CccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc-cCCCCccceeechhHHHHHHHhCCCCCCCCC---hh
Q 001783 751 AVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-GTGHGTTADWWSVGIILFELIVGIPPFNAEH---PQ 826 (1013)
Q Consensus 751 ~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~-g~~ys~ksDIWSLGVILYELLTGk~PF~g~~---~~ 826 (1013)
..........||+.|+|||++. +..++.++||||||+++|+|++|..||.... ..
T Consensus 150 ---------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~ 208 (260)
T PF00069_consen 150 ---------------------ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQL 208 (260)
T ss_dssp ---------------------STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHH
T ss_pred ---------------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhh
Confidence 0011233567899999999998 7889999999999999999999999998873 33
Q ss_pred HHHHhhhccCCCCCC-CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 827 QIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~-lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
....+.......... .....+.++.+||.+||+.||.+|| ++.++++||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~---~~~~l~~~~~~ 260 (260)
T PF00069_consen 209 EIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRP---SAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGST---THHHHHTSGGG
T ss_pred hhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCc---CHHHHhcCCCC
Confidence 333333322111110 1112348999999999999999999 99999999998
No 123
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.5e-42 Score=379.91 Aligned_cols=260 Identities=30% Similarity=0.553 Sum_probs=221.2
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCC-eeEEEeeeeccc----
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPF-VVRFFYSFTCRE---- 662 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPN-IVkL~e~fed~~---- 662 (1013)
+..|+.+++||+|+||+||+|+.+.+|+.||+|.+...... +.......+|+.+|+.++|+| |++|++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 56688899999999999999999999999999999765321 224456789999999999999 999999999877
Q ss_pred --eEEEEEEeccCCChHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCc
Q 001783 663 --NLYLVMEYLNGGDLYSLLRNLG----CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1013)
Q Consensus 663 --~LyLVMEy~~GGSL~dlL~~~g----~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1013)
.+|||+||+.. +|..++...+ .++...++.+++||+.||+|||++||+||||||.||||+.+|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 89999999976 9999997654 5888999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHh
Q 001783 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 737 k~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLT 815 (1013)
+..... .+...+.++|.+|+|||++.|. .|+..+||||+|||++||++
T Consensus 168 ra~~ip-------------------------------~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~ 216 (323)
T KOG0594|consen 168 RAFSIP-------------------------------MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFT 216 (323)
T ss_pred HHhcCC-------------------------------cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHh
Confidence 831100 0113456899999999999986 79999999999999999999
Q ss_pred CCCCCCCCChhHHHHhhhccC-----CCCC-------------CCC---------CCCCHHHHHHHHHhccCCcCCcCCC
Q 001783 816 GIPPFNAEHPQQIFDNILNRK-----IPWP-------------RVP---------EEMSPEAHDLIDRFLTEDPHQRLGS 868 (1013)
Q Consensus 816 Gk~PF~g~~~~ei~qkIl~~~-----~~~p-------------~lp---------~~lS~elkDLI~rMLqkDPekRPg~ 868 (1013)
+++.|.+.+..+....|.... ..|| ... +..++++.+++.+||+++|.+|.
T Consensus 217 ~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~-- 294 (323)
T KOG0594|consen 217 RRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRI-- 294 (323)
T ss_pred CCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCc--
Confidence 999999999888777776511 1121 111 12346899999999999999999
Q ss_pred CCHHHHHhCCCCCCC
Q 001783 869 GGASEVKQHVFFKDI 883 (1013)
Q Consensus 869 ~TAeELLqHPFFk~I 883 (1013)
+|..++.||||..+
T Consensus 295 -Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 295 -SAKGALTHPYFSEL 308 (323)
T ss_pred -CHHHHhcChhhccc
Confidence 99999999999976
No 124
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=7.8e-42 Score=372.65 Aligned_cols=257 Identities=26% Similarity=0.417 Sum_probs=208.0
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEEC-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeee
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKR-----TTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSF 658 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk-----~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~f 658 (1013)
....++|++.+.||+|+||.||+|.+. .+++.||+|+++... .......+.+|+.+|..+ +||||+++++++
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGAC 80 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence 344578999999999999999999852 445789999987532 233456789999999999 899999999988
Q ss_pred ecc-ceEEEEEEeccCCChHHHHHhc------------------------------------------------------
Q 001783 659 TCR-ENLYLVMEYLNGGDLYSLLRNL------------------------------------------------------ 683 (1013)
Q Consensus 659 ed~-~~LyLVMEy~~GGSL~dlL~~~------------------------------------------------------ 683 (1013)
... ..+|+||||++||+|.+++...
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 764 4689999999999999998642
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCc
Q 001783 684 --------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGT 755 (1013)
Q Consensus 684 --------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gt 755 (1013)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~------------ 228 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP------------ 228 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCc------------
Confidence 237788889999999999999999999999999999999999999999999987311000
Q ss_pred ccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhHHHHhhhc
Q 001783 756 TLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILN 834 (1013)
Q Consensus 756 tl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~~ei~qkIl~ 834 (1013)
.........+|+.|||||++.+..++.++|||||||++|||++ |.+||.+....+.+...+.
T Consensus 229 -----------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~ 291 (338)
T cd05102 229 -----------------DYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLK 291 (338)
T ss_pred -----------------chhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHh
Confidence 0001123456789999999999999999999999999999997 9999987655444433333
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 835 RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 835 ~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
... .+..+..+++++.+||.+||+.||.+|| ++.++++
T Consensus 292 ~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RP---s~~el~~ 329 (338)
T cd05102 292 DGT-RMRAPENATPEIYRIMLACWQGDPKERP---TFSALVE 329 (338)
T ss_pred cCC-CCCCCCCCCHHHHHHHHHHccCChhhCc---CHHHHHH
Confidence 322 2334667899999999999999999999 8888875
No 125
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.5e-41 Score=348.71 Aligned_cols=254 Identities=30% Similarity=0.536 Sum_probs=222.7
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|.+.+.||+|+||.||+|.+..+++.|++|.+...... ......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 589999999999999999999999999999998765433 3445678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 670 y~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|++|++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||+++.....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~----- 154 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN----- 154 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCc-----
Confidence 99999999999764 56899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
........|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+...
T Consensus 155 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 208 (256)
T cd08529 155 --------------------------TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA 208 (256)
T ss_pred --------------------------cchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 001123578999999999999989999999999999999999999999888777
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 828 i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
....+..... +.++..++.++.++|.+||+.+|++|| ++.++++|||+
T Consensus 209 ~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~ll~~~~~ 256 (256)
T cd08529 209 LILKIIRGVF--PPVSQMYSQQLAQLIDQCLTKDYRQRP---DTFQLLRNPSL 256 (256)
T ss_pred HHHHHHcCCC--CCCccccCHHHHHHHHHHccCCcccCc---CHHHHhhCCCC
Confidence 7777765443 445557889999999999999999999 99999999995
No 126
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1e-41 Score=359.97 Aligned_cols=260 Identities=33% Similarity=0.572 Sum_probs=224.5
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||.|+||+||+|.+..++..||+|++... .....+.+.+|+.+++.++||||+++++.+.....+|+||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 6799999999999999999999989999999998653 2345577889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||+++++|..++.+. ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~------ 155 (280)
T cd06611 82 EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS------ 155 (280)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcc------
Confidence 999999999998764 5699999999999999999999999999999999999999999999999998763100
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
.........||+.|+|||++. +..++.++|+|||||++|+|++|++||..
T Consensus 156 -------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~ 210 (280)
T cd06611 156 -------------------------TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHE 210 (280)
T ss_pred -------------------------cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCccc
Confidence 001122457899999999985 34567899999999999999999999998
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCCh
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINW 885 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw 885 (1013)
.+.......+.....+....+..++.++.+||.+||+.+|.+|| ++.++++||||.+...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~~~~~~~~~~ 270 (280)
T cd06611 211 LNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRP---TAAELLKHPFVSDQSD 270 (280)
T ss_pred CCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCc---CHHHHhcChhhcccch
Confidence 87777777776554433344567899999999999999999999 9999999999987643
No 127
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.3e-41 Score=395.83 Aligned_cols=261 Identities=29% Similarity=0.487 Sum_probs=225.3
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc-----
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE----- 662 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~----- 662 (1013)
.++|++.+.||+|+||+||+|++..+|+.||||++..... .......+.+|+.++..++|+||+++++.+....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 4689999999999999999999999999999999976543 3345567889999999999999999988775432
Q ss_pred ---eEEEEEEeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCC
Q 001783 663 ---NLYLVMEYLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1013)
Q Consensus 663 ---~LyLVMEy~~GGSL~dlL~~~----g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1013)
.+++||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGl 189 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGF 189 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEeccc
Confidence 378999999999999998643 4689999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh
Q 001783 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 736 Ak~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT 815 (1013)
++...... ........+||+.|+|||++.+..|+.++|||||||++|||++
T Consensus 190 s~~~~~~~-----------------------------~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLlt 240 (496)
T PTZ00283 190 SKMYAATV-----------------------------SDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLT 240 (496)
T ss_pred Ceeccccc-----------------------------cccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 87411000 0011234689999999999999999999999999999999999
Q ss_pred CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 816 GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 816 Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
|+.||.+.+..+.+..+..... +.++..+++++.+||.+||+.||.+|| ++.++++|||++..
T Consensus 241 G~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~L~~dP~~RP---s~~ell~~p~~~~~ 303 (496)
T PTZ00283 241 LKRPFDGENMEEVMHKTLAGRY--DPLPPSISPEMQEIVTALLSSDPKRRP---SSSKLLNMPICKLF 303 (496)
T ss_pred CCCCCCCCCHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHcccChhhCc---CHHHHHhCHHHHHh
Confidence 9999999988888888776543 345678999999999999999999999 99999999998753
No 128
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-42 Score=393.17 Aligned_cols=259 Identities=31% Similarity=0.546 Sum_probs=235.1
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce-EE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN-LY 665 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~-Ly 665 (1013)
.++.|+.++.+|+|+||.+++++++..++.|++|.+.......+. .+...+|..+++++.|||||.+++.|..++. +|
T Consensus 2 ~m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~ 80 (426)
T KOG0589|consen 2 EMDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLC 80 (426)
T ss_pred ccchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCCceEE
Confidence 357899999999999999999999999999999999877654443 3478899999999999999999999999988 99
Q ss_pred EEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 666 LVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
|||+||+||+|.+.|.+. ..++++.+..|+.||+.||+|||+++|+|||||+.||+++.++.|||.|||+|+...
T Consensus 81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~--- 157 (426)
T KOG0589|consen 81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILN--- 157 (426)
T ss_pred EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcC---
Confidence 999999999999999765 369999999999999999999999999999999999999999999999999999510
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
.......+.+|||.||.||++.+.+|+.++|||||||++|||++-+++|.+.
T Consensus 158 ----------------------------~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~ 209 (426)
T KOG0589|consen 158 ----------------------------PEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS 209 (426)
T ss_pred ----------------------------CchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc
Confidence 0011345689999999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
+...+..+|..... ..+|...+.+++.||..||.++|..|| +|.++|.+|....
T Consensus 210 ~m~~Li~ki~~~~~--~Plp~~ys~el~~lv~~~l~~~P~~RP---sa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 210 NMSELILKINRGLY--SPLPSMYSSELRSLVKSMLRKNPEHRP---SALELLRRPHLLR 263 (426)
T ss_pred chHHHHHHHhhccC--CCCCccccHHHHHHHHHHhhcCCccCC---CHHHHhhChhhhh
Confidence 99999999988773 457889999999999999999999999 9999999998764
No 129
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-42 Score=389.35 Aligned_cols=259 Identities=35% Similarity=0.609 Sum_probs=234.7
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
-.=|.+-+.||.|-|+.|-+|++.-||..||||++.|..+..- ...+++.|++.|+.++|||||+||++..+...+|||
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~-st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-STGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh-hhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 3459999999999999999999999999999999999876433 447889999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeec-CCCcEEEeecCCccccccCCCC
Q 001783 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIA-HDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd-~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
+|+-+||+|+++|.+. ..+.|+.++.|++||+.|+.|+|+..+|||||||+|+.+- .-|-|||+|||++...
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf------ 169 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF------ 169 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccC------
Confidence 9999999999999665 5699999999999999999999999999999999999775 5699999999987521
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCC-ccceeechhHHHHHHHhCCCCCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHG-TTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys-~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
+.+.+..+.||+..|.|||+++|..|+ +++||||||||||-|++|++||...+
T Consensus 170 --------------------------~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN 223 (864)
T KOG4717|consen 170 --------------------------QPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN 223 (864)
T ss_pred --------------------------CCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc
Confidence 123445678999999999999999985 67899999999999999999999999
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCCh
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINW 885 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw 885 (1013)
..+++..|+..++. +|..+|.+++|||..||..||.+|- +.++|..|+|++.++-
T Consensus 224 DSETLTmImDCKYt---vPshvS~eCrdLI~sMLvRdPkkRA---slEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 224 DSETLTMIMDCKYT---VPSHVSKECRDLIQSMLVRDPKKRA---SLEEIVSTSWLQAGDR 278 (864)
T ss_pred chhhhhhhhccccc---CchhhhHHHHHHHHHHHhcCchhhc---cHHHHhccccccCCCC
Confidence 99999999999885 4678999999999999999999999 9999999999998753
No 130
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.8e-41 Score=353.15 Aligned_cols=262 Identities=29% Similarity=0.506 Sum_probs=221.6
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeecccc---ccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM---IRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~---~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
+|++.+.||.|+||+||+|.+ .+++.+|+|.++.... ........+.+|+++++.++|+||+++++++.+...+|+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 488899999999999999987 5788999999875321 223445678899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
||||++|++|.+++.+.+.+++..+..++.||+.||+|||+.||+|+||||+||+++.++.++|+|||++.........
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~- 158 (265)
T cd06631 80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH- 158 (265)
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc-
Confidence 9999999999999988788999999999999999999999999999999999999999999999999998731100000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
. ..........||..|+|||++.+..++.++|+|||||++|+|++|..||...+..
T Consensus 159 -------~-----------------~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~ 214 (265)
T cd06631 159 -------G-----------------THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL 214 (265)
T ss_pred -------c-----------------cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH
Confidence 0 0001123457999999999999988999999999999999999999999876655
Q ss_pred HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
.....+.......+.++..++.++.+||++||+.+|.+|| ++.++++||||
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~~l~~~~~ 265 (265)
T cd06631 215 AAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERP---SALQLLRHDFL 265 (265)
T ss_pred HHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCC---CHHHHhcCCCC
Confidence 5544554443445667778999999999999999999999 99999999998
No 131
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.4e-41 Score=352.23 Aligned_cols=261 Identities=28% Similarity=0.524 Sum_probs=221.4
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc------cHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI------RKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~------~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~ 663 (1013)
+|.+...||.|+||.||+|.+..+++.||+|.+...... .....+.+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 377888999999999999999989999999998754322 12345678899999999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
.|+||||+++++|.+++.+.+.+++..+..++.||+.||+|||++|++||||+|+||+++.++.++|+|||+++....+.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS 160 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence 99999999999999999888889999999999999999999999999999999999999999999999999987421000
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
.. ...........|++.|+|||.+.+..++.++|+|||||++|+|++|+.||...
T Consensus 161 ~~-------------------------~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 215 (267)
T cd06628 161 LS-------------------------TKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDC 215 (267)
T ss_pred cc-------------------------CCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCc
Confidence 00 00001122456899999999999888999999999999999999999999877
Q ss_pred ChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
+.......+... ..+.++..++..+.++|.+||+.||.+|| ++.++++||||
T Consensus 216 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~ 267 (267)
T cd06628 216 TQLQAIFKIGEN--ASPEIPSNISSEAIDFLEKTFEIDHNKRP---TAAELLKHPFL 267 (267)
T ss_pred cHHHHHHHHhcc--CCCcCCcccCHHHHHHHHHHccCCchhCc---CHHHHhhCCCC
Confidence 665555554442 23456678899999999999999999999 99999999998
No 132
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=4e-41 Score=358.08 Aligned_cols=261 Identities=37% Similarity=0.658 Sum_probs=215.2
Q ss_pred EeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHH---HHHhcCCCCeeEEEeeeeccceEEEEEEecc
Q 001783 596 PISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERD---ILISVRNPFVVRFFYSFTCRENLYLVMEYLN 672 (1013)
Q Consensus 596 ~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~---IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~ 672 (1013)
.||+|+||.||+|++..+++.||+|++.+..............|.. ++....||+|+++++.|...+.+|+||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999999999999999987654332222223334443 3445689999999999999999999999999
Q ss_pred CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCc
Q 001783 673 GGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAV 752 (1013)
Q Consensus 673 GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~ 752 (1013)
||+|..++.+.+.+++..++.++.|++.||+|||+.+|+||||||+|||++.++.++|+|||+++... .
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~-~---------- 149 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS-K---------- 149 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccC-c----------
Confidence 99999999888889999999999999999999999999999999999999999999999999986210 0
Q ss_pred cCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCC---ChhHH
Q 001783 753 SGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAE---HPQQI 828 (1013)
Q Consensus 753 ~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~---~~~ei 828 (1013)
......+||..|+|||++.+ ..++.++||||+||++|+|++|..||... .....
T Consensus 150 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~ 207 (278)
T cd05606 150 ----------------------KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 207 (278)
T ss_pred ----------------------cCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH
Confidence 00123479999999999975 46899999999999999999999999866 33333
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCC--CHHHHHhCCCCCCCChhhHhhhc
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQK 892 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~--TAeELLqHPFFk~Idw~~L~~~k 892 (1013)
...+.... +..+..++.++.++|.+||..+|.+||... ++.++++||||+.++|..+...+
T Consensus 208 ~~~~~~~~---~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 270 (278)
T cd05606 208 DRMTLTMA---VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQK 270 (278)
T ss_pred HHHhhccC---CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchHhhhcc
Confidence 33332222 334566899999999999999999999765 89999999999999999887654
No 133
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.2e-41 Score=357.11 Aligned_cols=256 Identities=32% Similarity=0.552 Sum_probs=219.7
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEe
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy 670 (1013)
|++++.||.|+||.||+|++..++..+|+|.+.... ......+.+|+.+++.++||||+++++.+...+..|+||||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 788999999999999999999999999999986542 34556788999999999999999999999999999999999
Q ss_pred ccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 671 LNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 671 ~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
+++++|..++.+ .+.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~------- 156 (282)
T cd06643 84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT------- 156 (282)
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc-------
Confidence 999999988865 467999999999999999999999999999999999999999999999999998631000
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
........||+.|+|||++. +..++.++|||||||++|+|++|.+||...+
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~ 212 (282)
T cd06643 157 ------------------------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN 212 (282)
T ss_pred ------------------------ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC
Confidence 00122357899999999984 3457889999999999999999999999887
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
..+....+.....+....+..++.++.+||.+||..||.+|| +++++++||||+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~~~ 268 (282)
T cd06643 213 PMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARW---TTTQLLQHPFVTVN 268 (282)
T ss_pred HHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCc---CHHHHhcCCCEecc
Confidence 777666665544333334567889999999999999999999 99999999999853
No 134
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.5e-41 Score=355.70 Aligned_cols=255 Identities=32% Similarity=0.527 Sum_probs=214.6
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|+.+++.++||||+++++.+...+.+|+|
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 467999999999999999999999999999999987543 22345678899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|||+++++|.+++...+.+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~----- 159 (267)
T cd06645 85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT----- 159 (267)
T ss_pred EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc-----
Confidence 999999999999988889999999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc---cCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL---GTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~---g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
........||+.|+|||++. ...++.++|+|||||++|+|++|.+||....
T Consensus 160 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~ 213 (267)
T cd06645 160 --------------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLH 213 (267)
T ss_pred --------------------------ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCccccc
Confidence 00122457999999999985 4558899999999999999999999997655
Q ss_pred hhHHHHhhhccCCCCCCC--CCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCC
Q 001783 825 PQQIFDNILNRKIPWPRV--PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~l--p~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPF 879 (1013)
+......+.......+.. ...++..+.+||.+||+.+|.+|| ++++|++|||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---~~~~ll~~~~ 267 (267)
T cd06645 214 PMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRP---TAEKLLQHPF 267 (267)
T ss_pred chhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCc---CHHHHhcCCC
Confidence 444333333332222222 124778999999999999999999 9999999998
No 135
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.2e-41 Score=394.25 Aligned_cols=252 Identities=31% Similarity=0.525 Sum_probs=216.4
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-C-----CCeeEEEeeeeccce
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-N-----PFVVRFFYSFTCREN 663 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-H-----PNIVkL~e~fed~~~ 663 (1013)
+|++++.||+|+||.|.+|.+..|++.||||+++.. .........|+.||..++ | -|||+++++|...+|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 699999999999999999999999999999999864 345677788999999997 4 389999999999999
Q ss_pred EEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC--CcEEEeecCCcccc
Q 001783 664 LYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD--GHIKLTDFGLSKVG 739 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d--G~VKLiDFGLAk~~ 739 (1013)
+|||+|++. -+|+++++.+ ..|+...++.++.||+.||.+||+.||||+|||||||||.+- ..|||+|||.|...
T Consensus 263 lciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 999999995 4999999876 459999999999999999999999999999999999999764 37999999998741
Q ss_pred ccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCC
Q 001783 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPP 819 (1013)
Q Consensus 740 ~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~P 819 (1013)
.+...+++.+..|+|||++.|.+|+.+.||||||||+.||++|.+.
T Consensus 342 ----------------------------------~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PL 387 (586)
T KOG0667|consen 342 ----------------------------------SQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPL 387 (586)
T ss_pred ----------------------------------CCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccc
Confidence 1112257888999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHhhhccCCC---------------------CCC----------------------------CC-------
Q 001783 820 FNAEHPQQIFDNILNRKIP---------------------WPR----------------------------VP------- 843 (1013)
Q Consensus 820 F~g~~~~ei~qkIl~~~~~---------------------~p~----------------------------lp------- 843 (1013)
|.+.+..+.+..|+.-... ++. .|
T Consensus 388 fpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~ 467 (586)
T KOG0667|consen 388 FPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLE 467 (586)
T ss_pred cCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccc
Confidence 9999998888887651000 000 11
Q ss_pred ----CCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 844 ----EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 844 ----~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
..-...+.|||.+||.+||.+|+ |+.++|+||||...
T Consensus 468 ~~~~~~~~~~F~dflk~~L~~dP~~R~---tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 468 SGLPKADDKLFIDFLKRCLEWDPAERI---TPAQALNHPFLTGT 508 (586)
T ss_pred hhcccccHHHHHHHHHHHhccCchhcC---CHHHHhcCcccccc
Confidence 01235689999999999999999 99999999999854
No 136
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.1e-41 Score=362.93 Aligned_cols=261 Identities=26% Similarity=0.510 Sum_probs=215.3
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
.+++|++++.||.|+||.||+|+++.+++.||+|.++.... ......+.+|+.+++.++||||+++++++...+.+|+
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 81 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL 81 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence 45789999999999999999999999999999999875432 2223456789999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 667 VMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
||||+. ++|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 82 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~--- 157 (301)
T cd07873 82 VFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIP--- 157 (301)
T ss_pred EEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC---
Confidence 999997 4898888654 56899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
........+++.|+|||++.+ ..++.++|||||||++|+|++|++||...+
T Consensus 158 ----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~ 209 (301)
T cd07873 158 ----------------------------TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST 209 (301)
T ss_pred ----------------------------CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 001123467899999999876 457889999999999999999999998877
Q ss_pred hhHHHHhhhccC-------------------CCCCC--------CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 825 PQQIFDNILNRK-------------------IPWPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 825 ~~ei~qkIl~~~-------------------~~~p~--------lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
..+....+.... ..++. ....+++.+.+||.+||+.||.+|| |++++++|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~---t~~eil~h 286 (301)
T cd07873 210 VEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRI---SAEEAMKH 286 (301)
T ss_pred HHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCc---CHHHHhcC
Confidence 655544433210 00111 1135788999999999999999999 99999999
Q ss_pred CCCCCCC
Q 001783 878 VFFKDIN 884 (1013)
Q Consensus 878 PFFk~Id 884 (1013)
|||..+-
T Consensus 287 ~~f~~~~ 293 (301)
T cd07873 287 PYFHCLG 293 (301)
T ss_pred ccccccc
Confidence 9998653
No 137
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=6.5e-41 Score=348.04 Aligned_cols=260 Identities=33% Similarity=0.561 Sum_probs=220.4
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++.+.||.|+||+||+|....++..+|+|++....... ....+.+|+.+++.++|+||+++++.+...+..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 47999999999999999999998899999999987644322 5678899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 669 EYLNGGDLYSLLRNL---GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~---g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
|+++|++|.+++.+. +.+++..++.++.||+.||.|||++||+||||||+||++++++.++|+|||++........
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~- 157 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD- 157 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc-
Confidence 999999999999764 4589999999999999999999999999999999999999999999999999874211000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
.........+|++.|+|||++... .++.++|+|||||++|+|++|+.||...+
T Consensus 158 --------------------------~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~ 211 (267)
T cd06610 158 --------------------------RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYP 211 (267)
T ss_pred --------------------------ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccC
Confidence 000112345789999999999876 78999999999999999999999998877
Q ss_pred hhHHHHhhhccCCC-CCCC--CCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 825 PQQIFDNILNRKIP-WPRV--PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~-~p~l--p~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
....+..+.....+ ++.. ...+++.+.+||.+||++||.+|| ++.+|++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~ll~~p~~ 267 (267)
T cd06610 212 PMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRP---TAEELLKHKFF 267 (267)
T ss_pred hhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCc---CHHHHhhCCCC
Confidence 76666666554322 1111 136789999999999999999999 99999999998
No 138
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=6.4e-41 Score=362.09 Aligned_cols=256 Identities=30% Similarity=0.526 Sum_probs=215.8
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++.+.||+|+||.||++++..++..||+|.+.... .......+.+|++++..++||||+++++.|.+.+.+|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 46999999999999999999999999999999986532 2344567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||++|++|.+++.+.+.+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||++....
T Consensus 79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~------- 151 (308)
T cd06615 79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI------- 151 (308)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccc-------
Confidence 999999999999888889999999999999999999997 699999999999999999999999999876310
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
.......+|++.|+|||++.+..++.++|+|||||++|+|++|..||...+...
T Consensus 152 --------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~ 205 (308)
T cd06615 152 --------------------------DSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE 205 (308)
T ss_pred --------------------------ccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh
Confidence 001123578999999999988889999999999999999999999997655433
Q ss_pred HHHhhhccCC----------------------------------CCCCCC-CCCCHHHHHHHHHhccCCcCCcCCCCCHH
Q 001783 828 IFDNILNRKI----------------------------------PWPRVP-EEMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1013)
Q Consensus 828 i~qkIl~~~~----------------------------------~~p~lp-~~lS~elkDLI~rMLqkDPekRPg~~TAe 872 (1013)
....+..... ..|..+ ..++.++.+||.+||..||.+|| ++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~ 282 (308)
T cd06615 206 LEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERA---DLK 282 (308)
T ss_pred HHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCc---CHH
Confidence 3222211000 001111 13678899999999999999999 999
Q ss_pred HHHhCCCCCC
Q 001783 873 EVKQHVFFKD 882 (1013)
Q Consensus 873 ELLqHPFFk~ 882 (1013)
++++||||.+
T Consensus 283 ~ll~~~~~~~ 292 (308)
T cd06615 283 ELTKHPFIKR 292 (308)
T ss_pred HHhcChhhhh
Confidence 9999999975
No 139
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2.5e-41 Score=352.30 Aligned_cols=253 Identities=39% Similarity=0.727 Sum_probs=221.0
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++.+.||.|+||.||+|.+..+++.||+|++.+.........+.+.+|+.++++++||||+++++.+.+..++|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 48999999999999999999999999999999987655555567889999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
|+.|++|..++.....+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~------- 153 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD------- 153 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCC-------
Confidence 9999999999988778999999999999999999999999999999999999999999999999988631000
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh---h
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP---Q 826 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~---~ 826 (1013)
.......|+..|+|||++.+..++.++|+||||+++|+|++|..||...+. .
T Consensus 154 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~ 208 (258)
T cd05578 154 -------------------------TLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRD 208 (258)
T ss_pred -------------------------ccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHH
Confidence 011234688899999999988899999999999999999999999987763 3
Q ss_pred HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCH--HHHHhCCCC
Q 001783 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGA--SEVKQHVFF 880 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TA--eELLqHPFF 880 (1013)
.+...... ..+..+..++..+.++|.+||..||.+|| ++ .++++||||
T Consensus 209 ~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---~~~~~~l~~~~~~ 258 (258)
T cd05578 209 QIRAKQET---ADVLYPATWSTEAIDAINKLLERDPQKRL---GDNLKDLKNHPYF 258 (258)
T ss_pred HHHHHhcc---ccccCcccCcHHHHHHHHHHccCChhHcC---CccHHHHhcCCCC
Confidence 33333222 22345667899999999999999999999 66 999999998
No 140
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=5.9e-41 Score=355.80 Aligned_cols=252 Identities=28% Similarity=0.501 Sum_probs=211.9
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||.|+||.||+|++..+++.||+|++.+.. .......+.+|+.++..++||||+++++.+...+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 46899999999999999999999999999999987542 2334567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||+++++|..+ ..+++..+..++.||+.||+|||+.||+|+||||+|||++.++.++|+|||++.....
T Consensus 79 e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~------- 147 (279)
T cd06619 79 EFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN------- 147 (279)
T ss_pred ecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc-------
Confidence 99999998654 3578999999999999999999999999999999999999999999999999863100
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh---
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP--- 825 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~--- 825 (1013)
......+||+.|+|||++.+..++.++|+|||||++|+|++|+.||.....
T Consensus 148 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~ 201 (279)
T cd06619 148 --------------------------SIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQG 201 (279)
T ss_pred --------------------------ccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccc
Confidence 011235799999999999999999999999999999999999999965321
Q ss_pred ----hHHHHhhhccCCCCCCC-CCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCC
Q 001783 826 ----QQIFDNILNRKIPWPRV-PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1013)
Q Consensus 826 ----~ei~qkIl~~~~~~p~l-p~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Id 884 (1013)
......+..... +.. ....++++.+||.+||+.||.+|| +++++++||||...+
T Consensus 202 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~Rp---~~~eil~~~~~~~~~ 260 (279)
T cd06619 202 SLMPLQLLQCIVDEDP--PVLPVGQFSEKFVHFITQCMRKQPKERP---APENLMDHPFIVQYN 260 (279)
T ss_pred ccchHHHHHHHhccCC--CCCCCCcCCHHHHHHHHHHhhCChhhCC---CHHHHhcCccccccc
Confidence 122222222221 112 235788999999999999999999 999999999998764
No 141
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-42 Score=379.12 Aligned_cols=252 Identities=33% Similarity=0.556 Sum_probs=214.0
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc-----ceE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR-----ENL 664 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~-----~~L 664 (1013)
.|+-.+++|.|+||.||.|....+++.||||.+-... +.-.+|+.+|+.++|||||+|..+|... -++
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 4889999999999999999999999999999875432 1224799999999999999999888653 256
Q ss_pred EEEEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC-CcEEEeecCCcccc
Q 001783 665 YLVMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD-GHIKLTDFGLSKVG 739 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d-G~VKLiDFGLAk~~ 739 (1013)
.+|||||+. +|..+++. +..++.-.++.|+.||++||.|||+.||+||||||.|||+|.+ |.+||||||.|+..
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 799999986 99999974 4679999999999999999999999999999999999999976 99999999999952
Q ss_pred ccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCC
Q 001783 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIP 818 (1013)
Q Consensus 740 ~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~ 818 (1013)
.. +....++..|..|+|||.+.| ..|+.+.||||.||++.||+-|++
T Consensus 177 ~~--------------------------------~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~p 224 (364)
T KOG0658|consen 177 VK--------------------------------GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQP 224 (364)
T ss_pred cc--------------------------------CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCc
Confidence 11 122346788999999999998 569999999999999999999999
Q ss_pred CCCCCChhHHHHhhhccC-----------------CCCCC---------CCCCCCHHHHHHHHHhccCCcCCcCCCCCHH
Q 001783 819 PFNAEHPQQIFDNILNRK-----------------IPWPR---------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1013)
Q Consensus 819 PF~g~~~~ei~qkIl~~~-----------------~~~p~---------lp~~lS~elkDLI~rMLqkDPekRPg~~TAe 872 (1013)
.|.|++..+.+..|.+.. ..+|. +....++++.+|+.++|+++|.+|. ++.
T Consensus 225 lFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~---~~~ 301 (364)
T KOG0658|consen 225 LFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRL---SAL 301 (364)
T ss_pred ccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcC---CHH
Confidence 999998888777776511 11121 2345789999999999999999999 999
Q ss_pred HHHhCCCCCCCC
Q 001783 873 EVKQHVFFKDIN 884 (1013)
Q Consensus 873 ELLqHPFFk~Id 884 (1013)
|+++||||..+.
T Consensus 302 ~~l~h~fFdelr 313 (364)
T KOG0658|consen 302 EALAHPFFDELR 313 (364)
T ss_pred HHhcchhhHHhh
Confidence 999999998653
No 142
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.2e-41 Score=378.82 Aligned_cols=260 Identities=22% Similarity=0.341 Sum_probs=212.6
Q ss_pred CCcEEEEEeeccCceEEEEEEEC--CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKR--TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk--~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
.+|++++.||+|+||.||+|... .+++.||+|.+.... ...+|+.+|+.++||||+++++.|.....+|+
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--------cHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 46999999999999999999764 356789999886532 34579999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|||++. ++|.+++...+.+++..++.++.||+.||.|||++|||||||||+|||++.++.++|+|||+++......
T Consensus 164 v~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~--- 239 (392)
T PHA03207 164 VMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP--- 239 (392)
T ss_pred EehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccc---
Confidence 999996 5999999777889999999999999999999999999999999999999999999999999986311000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
........+||+.|+|||++.+..|+.++|||||||++|||++|..||.+....
T Consensus 240 --------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~ 293 (392)
T PHA03207 240 --------------------------DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVK 293 (392)
T ss_pred --------------------------ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCC
Confidence 001122467999999999999999999999999999999999999999765421
Q ss_pred ---HHHHhhhcc----CCC-------------------------CCCC--CCCCCHHHHHHHHHhccCCcCCcCCCCCHH
Q 001783 827 ---QIFDNILNR----KIP-------------------------WPRV--PEEMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1013)
Q Consensus 827 ---ei~qkIl~~----~~~-------------------------~p~l--p~~lS~elkDLI~rMLqkDPekRPg~~TAe 872 (1013)
..+..+... ... .+.. ...++.++.+||.+||+.||.+|| ++.
T Consensus 294 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rp---sa~ 370 (392)
T PHA03207 294 SSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRP---SAQ 370 (392)
T ss_pred CcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCC---CHH
Confidence 112222110 000 0000 123567899999999999999999 999
Q ss_pred HHHhCCCCCCCChhhHh
Q 001783 873 EVKQHVFFKDINWDTLA 889 (1013)
Q Consensus 873 ELLqHPFFk~Idw~~L~ 889 (1013)
++|+||||+...|+.+.
T Consensus 371 e~l~~p~f~~~~~~~~~ 387 (392)
T PHA03207 371 DILSLPLFTKEPINLLN 387 (392)
T ss_pred HHhhCchhhccchhhhc
Confidence 99999999988887664
No 143
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-40 Score=358.15 Aligned_cols=260 Identities=34% Similarity=0.568 Sum_probs=221.5
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
+....+|++++.||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++.|....+.
T Consensus 16 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~ 92 (296)
T cd06654 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 92 (296)
T ss_pred CCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEE
Confidence 3445789999999999999999999999999999999876442 2346788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+||||++|++|.+++.+ +.+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 93 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~-- 169 (296)
T cd06654 93 WVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-- 169 (296)
T ss_pred EEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccc--
Confidence 999999999999999865 46899999999999999999999999999999999999999999999999988631000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
........|++.|+|||.+.+..++.++|||||||++|+|++|++||....
T Consensus 170 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~ 220 (296)
T cd06654 170 -----------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (296)
T ss_pred -----------------------------ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Confidence 001123478999999999998889999999999999999999999998877
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
.......+.....+....+..++..+.+||.+||..||.+|| ++.++++||||..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~eil~~~~~~~ 275 (296)
T cd06654 221 PLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRG---SAKELLQHQFLKI 275 (296)
T ss_pred HHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCc---CHHHHhhChhhhc
Confidence 655444443333222234567889999999999999999999 9999999999974
No 144
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=5.5e-41 Score=353.91 Aligned_cols=255 Identities=30% Similarity=0.528 Sum_probs=209.1
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++++.||.|+||.||+|.+..++..||+|+++.... .......+.+|+.++..++||||+++++++.++..+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 58999999999999999999999999999999875432 22234567889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 670 YLNGGDLYSLLRNL---GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 670 y~~GGSL~dlL~~~---g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|+. ++|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 154 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP---- 154 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC----
Confidence 997 5898888643 46899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
........|++.|+|||++.+. .++.++|||||||++|+|++|++||.+...
T Consensus 155 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~ 207 (285)
T cd07861 155 ---------------------------VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSE 207 (285)
T ss_pred ---------------------------cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 0011234678999999998764 578999999999999999999999987655
Q ss_pred hHHHHhhhccCC------------------CC--------CCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCC
Q 001783 826 QQIFDNILNRKI------------------PW--------PRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1013)
Q Consensus 826 ~ei~qkIl~~~~------------------~~--------p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPF 879 (1013)
......+..... .+ ......+++++.+||++||+.||.+|| ++.+|+.|||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp---t~~~ll~~~~ 284 (285)
T cd07861 208 IDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRI---SAKKALNHPY 284 (285)
T ss_pred HHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCC---CHHHHhcCCC
Confidence 433222211000 00 011235789999999999999999999 9999999999
Q ss_pred C
Q 001783 880 F 880 (1013)
Q Consensus 880 F 880 (1013)
|
T Consensus 285 ~ 285 (285)
T cd07861 285 F 285 (285)
T ss_pred C
Confidence 8
No 145
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.3e-40 Score=345.55 Aligned_cols=254 Identities=37% Similarity=0.593 Sum_probs=218.6
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++.+.||.|+||.||+|.+..+++.+|+|++..... ...+.+.+|+.+++.++||||+++++.+.....+|++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG---DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch---hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 679999999999999999999999999999999976432 24578889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||+.+++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||++.....
T Consensus 80 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~------ 153 (262)
T cd06613 80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTA------ 153 (262)
T ss_pred eCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhh------
Confidence 999999999999776 7899999999999999999999999999999999999999999999999999863100
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC---CCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT---GHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~---~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
.........|+..|+|||++.+. .++.++|+|||||++|+|++|.+||...+
T Consensus 154 -------------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~ 208 (262)
T cd06613 154 -------------------------TIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208 (262)
T ss_pred -------------------------hhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 00112345789999999999877 78999999999999999999999998877
Q ss_pred hhHHHHhhhccCCCCC--CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCC
Q 001783 825 PQQIFDNILNRKIPWP--RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p--~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPF 879 (1013)
.......+.......+ ..+...+.++.+||.+||..+|.+|| ++.+++.|+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~il~~~~ 262 (262)
T cd06613 209 PMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRP---TATKLLQHPF 262 (262)
T ss_pred HHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCC---CHHHHhcCCC
Confidence 6665555544422211 22345678899999999999999999 9999999998
No 146
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=6.2e-41 Score=349.79 Aligned_cols=262 Identities=28% Similarity=0.517 Sum_probs=218.2
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc---cHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI---RKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~---~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
+|+..+.||+|+||.||+|.+..+++.||+|++...... .......+.+|+.+++.++||||+++++.+.+.+++++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 478889999999999999999999999999998754321 23346788999999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC-cEEEeecCCccccccCCCC
Q 001783 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-HIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG-~VKLiDFGLAk~~~~~s~d 745 (1013)
||||++|++|.+++.+.+.+++..+..++.||+.||.|||++|++|+||||+||+++.++ .++|+|||++........
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~- 159 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT- 159 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccc-
Confidence 999999999999998888899999999999999999999999999999999999998876 599999999863110000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
..........||..|+|||++.+..++.++|+|||||++|+|++|..||.....
T Consensus 160 --------------------------~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~ 213 (268)
T cd06630 160 --------------------------GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH 213 (268)
T ss_pred --------------------------cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence 000112235789999999999988899999999999999999999999975543
Q ss_pred hHHHHhhhc--cCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCC
Q 001783 826 QQIFDNILN--RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 826 ~ei~qkIl~--~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk 881 (1013)
......+.. .....+.++..+++++.++|.+||..+|.+|| ++.++++||||+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---~~~~ll~~~~~~ 268 (268)
T cd06630 214 SNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRP---PSRELLKHPVFR 268 (268)
T ss_pred cchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCc---CHHHHhcCcccC
Confidence 332222221 11122456677899999999999999999999 999999999995
No 147
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.1e-41 Score=351.62 Aligned_cols=255 Identities=31% Similarity=0.509 Sum_probs=213.9
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|+.++..++||||+++++.+...+.+|+|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 367999999999999999999999999999999987542 22345678899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|||+++++|.+++...+.+++..+..++.|++.||+|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~----- 159 (267)
T cd06646 85 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT----- 159 (267)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc-----
Confidence 999999999999988788999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc---cCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL---GTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~---g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
........|++.|+|||.+. ...++.++|||||||++|||++|..||....
T Consensus 160 --------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~ 213 (267)
T cd06646 160 --------------------------IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH 213 (267)
T ss_pred --------------------------ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence 00112356899999999985 3447889999999999999999999997655
Q ss_pred hhHHHHhhhccCCCCCC--CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCC
Q 001783 825 PQQIFDNILNRKIPWPR--VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~--lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPF 879 (1013)
..+....+.......+. ....++..+.+||++||+.+|++|| +++++++|+|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---~~~~il~~l~ 267 (267)
T cd06646 214 PMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRP---TAERLLTHLF 267 (267)
T ss_pred hhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCc---CHHHHhcCCC
Confidence 54433333333222222 1235789999999999999999999 9999999997
No 148
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=9.4e-41 Score=351.64 Aligned_cols=257 Identities=29% Similarity=0.484 Sum_probs=213.1
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||.||+|+++.+++.||+|++..... .....+.+.+|+.+++.++||||+++++++.....+|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 469999999999999999999999999999999875432 1223356789999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||++++.|..++.....+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~------ 153 (286)
T cd07847 80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGP------ 153 (286)
T ss_pred eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCC------
Confidence 99999988888877778999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
........|+..|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+
T Consensus 154 -------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~ 208 (286)
T cd07847 154 -------------------------GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD 208 (286)
T ss_pred -------------------------cccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 001123467889999999876 457899999999999999999999998776544
Q ss_pred HHHhhhccC-------------------CCCCC---------CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCC
Q 001783 828 IFDNILNRK-------------------IPWPR---------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1013)
Q Consensus 828 i~qkIl~~~-------------------~~~p~---------lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPF 879 (1013)
....+.... ...+. ....++..+.+||.+||+.||++|| ++.+++.|||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~eil~~~~ 285 (286)
T cd07847 209 QLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERL---SCEELLEHPY 285 (286)
T ss_pred HHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccC---CHHHHhcCCC
Confidence 433332110 00010 0135688999999999999999999 9999999999
Q ss_pred C
Q 001783 880 F 880 (1013)
Q Consensus 880 F 880 (1013)
|
T Consensus 286 f 286 (286)
T cd07847 286 F 286 (286)
T ss_pred C
Confidence 8
No 149
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.2e-41 Score=363.56 Aligned_cols=250 Identities=26% Similarity=0.469 Sum_probs=193.4
Q ss_pred EEEeeccCceEEEEEEEC--CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec--cceEEEEEE
Q 001783 594 IKPISRGAFGRVFLAKKR--TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC--RENLYLVME 669 (1013)
Q Consensus 594 lk~LGkG~FGtVyLArdk--~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed--~~~LyLVME 669 (1013)
.++||+|+||+||+|+++ .+++.||+|++..... ...+.+|+.+|+.++||||++++++|.. ...+|+|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 357999999999999976 4678999999875432 2346789999999999999999998864 457899999
Q ss_pred eccCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceee----cCCCcEEEeecCCc
Q 001783 670 YLNGGDLYSLLRNL---------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLI----AHDGHIKLTDFGLS 736 (1013)
Q Consensus 670 y~~GGSL~dlL~~~---------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILL----d~dG~VKLiDFGLA 736 (1013)
|+.+ +|..++... ..+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 81 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred ccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 9964 888887532 248999999999999999999999999999999999999 45678999999999
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHh
Q 001783 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 737 k~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLT 815 (1013)
+..... . .........+||+.|+|||++.+. .++.++|||||||++|+|++
T Consensus 160 ~~~~~~-~---------------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~ 211 (317)
T cd07868 160 RLFNSP-L---------------------------KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 211 (317)
T ss_pred eccCCC-C---------------------------ccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHh
Confidence 741000 0 000112346799999999999874 58999999999999999999
Q ss_pred CCCCCCCCCh---------hHHHHhhhccCC-----------CCC------------------------CCCCCCCHHHH
Q 001783 816 GIPPFNAEHP---------QQIFDNILNRKI-----------PWP------------------------RVPEEMSPEAH 851 (1013)
Q Consensus 816 Gk~PF~g~~~---------~ei~qkIl~~~~-----------~~p------------------------~lp~~lS~elk 851 (1013)
|++||..... ...+..+..... .++ ......+.++.
T Consensus 212 g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (317)
T cd07868 212 SEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAF 291 (317)
T ss_pred CCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHH
Confidence 9999965432 111222211000 000 00012356789
Q ss_pred HHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 852 DLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 852 DLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
+||.+||++||.+|| |++|+|+||||
T Consensus 292 dli~~mL~~dP~~R~---t~~e~l~hp~f 317 (317)
T cd07868 292 HLLQKLLTMDPIKRI---TSEQAMQDPYF 317 (317)
T ss_pred HHHHHHhccCcccCC---CHHHHhcCCCC
Confidence 999999999999999 99999999998
No 150
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=7e-41 Score=346.44 Aligned_cols=253 Identities=33% Similarity=0.610 Sum_probs=218.3
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++.+.||.|+||.||+|.+..+++.||+|.+.... ..+.+.+|+++++.++||||+++++.+.+..++|+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 67999999999999999999999889999999987542 1578899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||+++++|.+++.. ...+++..++.++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++......
T Consensus 78 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~----- 152 (256)
T cd06612 78 EYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT----- 152 (256)
T ss_pred ecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccC-----
Confidence 99999999999975 356899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
........|+..|+|||++.+..++.++|||||||++|+|++|++||.......
T Consensus 153 --------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~ 206 (256)
T cd06612 153 --------------------------MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR 206 (256)
T ss_pred --------------------------ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh
Confidence 001123468899999999999999999999999999999999999998776655
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 828 i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
....+..........+..++.++.+||.+||+.||.+|| ++.++++||||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp---s~~~il~~~~~ 256 (256)
T cd06612 207 AIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERP---SAIQLLQHPFI 256 (256)
T ss_pred hhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCc---CHHHHhcCCCC
Confidence 544444333222233456788999999999999999999 99999999998
No 151
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.1e-40 Score=347.26 Aligned_cols=260 Identities=30% Similarity=0.513 Sum_probs=218.5
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccc--cccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--ceE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKAD--MIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENL 664 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~--~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~--~~L 664 (1013)
.+|++.+.||+|+||.||+|.+..+++.||||++.... .........+.+|+.+++.++||||+++++++.+. ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 57999999999999999999999999999999986432 12234567888999999999999999999988764 468
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+||||++|++|.+++.+.+.+++..+..++.||+.||+|||++||+|+||||+|||++.++.++|+|||+++.....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~-- 159 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI-- 159 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccc--
Confidence 999999999999999988788999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
. . .........||..|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus 160 ------~-------------~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 213 (265)
T cd06652 160 ------C-------------L-------SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE 213 (265)
T ss_pred ------c-------------c-------cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc
Confidence 0 0 0001123468999999999998889999999999999999999999998766
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCC
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk 881 (1013)
.......+.... ..+..|..++..+.++|.+||. +|.+|| +++++++|||+.
T Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp---~~~~il~~~~~~ 265 (265)
T cd06652 214 AMAAIFKIATQP-TNPVLPPHVSDHCRDFLKRIFV-EAKLRP---SADELLRHTFVH 265 (265)
T ss_pred hHHHHHHHhcCC-CCCCCchhhCHHHHHHHHHHhc-ChhhCC---CHHHHhcCcccC
Confidence 555554444332 2345667788999999999995 999999 999999999984
No 152
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.4e-40 Score=343.83 Aligned_cols=254 Identities=29% Similarity=0.544 Sum_probs=222.5
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++++.||+|+||+||++++..+|+.||+|.+...... ......+.+|+.+++.++||||+++++.+...++.|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 589999999999999999999999999999998765432 2344678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 670 y~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|+.+++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+|||++.++.++|+|||++.....
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~------ 153 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS------ 153 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCc------
Confidence 99999999999764 3589999999999999999999999999999999999999999999999999863100
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
.........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+
T Consensus 154 -------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~ 208 (256)
T cd08218 154 -------------------------TVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN 208 (256)
T ss_pred -------------------------chhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH
Confidence 0001123468999999999998889999999999999999999999999888888
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 828 i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
....+..... +..+..++.++.++|.+||+.+|.+|| ++.++++||||
T Consensus 209 ~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~vl~~~~~ 256 (256)
T cd08218 209 LVLKIIRGSY--PPVSSHYSYDLRNLVSQLFKRNPRDRP---SVNSILEKNFI 256 (256)
T ss_pred HHHHHhcCCC--CCCcccCCHHHHHHHHHHhhCChhhCc---CHHHHhhCcCC
Confidence 8777766543 445677899999999999999999999 99999999998
No 153
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.3e-41 Score=354.98 Aligned_cols=257 Identities=28% Similarity=0.527 Sum_probs=216.4
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||.||+|++..++..||+|.++... .......+.+|+.++..++||||+++++.+...+.+|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 46999999999999999999999999999999986532 2334567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 669 EYLNGGDLYSLLRNL---GCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~---g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
||++|++|..++... ..+++..+..++.||+.||.|||+ .||+||||||+||+++.++.+||+|||++....
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~---- 154 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV---- 154 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCccccc----
Confidence 999999999988763 379999999999999999999996 699999999999999999999999999986310
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC------CCCccceeechhHHHHHHHhCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT------GHGTTADWWSVGIILFELIVGIP 818 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~------~ys~ksDIWSLGVILYELLTGk~ 818 (1013)
........|++.|+|||++.+. .++.++|||||||++|+|++|..
T Consensus 155 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~ 205 (286)
T cd06622 155 -----------------------------ASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRY 205 (286)
T ss_pred -----------------------------CCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCC
Confidence 0011234688899999998653 35789999999999999999999
Q ss_pred CCCCCChhHHHHhhhc-cCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 819 PFNAEHPQQIFDNILN-RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 819 PF~g~~~~ei~qkIl~-~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
||........+..+.. .....+.++..++.++.+||.+||+.+|.+|| ++.++++||||...
T Consensus 206 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~~~~~~~~ 268 (286)
T cd06622 206 PYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRP---TYAQLLEHPWLVKY 268 (286)
T ss_pred CCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCC---CHHHHhcChhhhhc
Confidence 9977655444433221 11223456667999999999999999999999 99999999999754
No 154
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.6e-40 Score=348.93 Aligned_cols=260 Identities=30% Similarity=0.507 Sum_probs=217.2
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeecccc--ccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--ceE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM--IRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENL 664 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~--~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~--~~L 664 (1013)
.+|++.+.||+|+||.||+|.+..+++.||+|++..... ........+.+|+.+++.++||||+++++.+... ..+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 368999999999999999999999999999999875432 1234556788999999999999999999988763 578
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|++|||+++++|.+++.+.+.+++.....++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 99999999999999998878899999999999999999999999999999999999999999999999999873100000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
.........|+..|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus 162 ----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~ 213 (266)
T cd06651 162 ----------------------------SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE 213 (266)
T ss_pred ----------------------------cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc
Confidence 0001123468899999999999889999999999999999999999998766
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCC
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk 881 (1013)
.......+.... ..+.++..+++.+.+|| +||..+|.+|| +++++++||||+
T Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~li-~~~~~~p~~Rp---~~~eil~hp~~~ 265 (266)
T cd06651 214 AMAAIFKIATQP-TNPQLPSHISEHARDFL-GCIFVEARHRP---SAEELLRHPFAQ 265 (266)
T ss_pred hHHHHHHHhcCC-CCCCCchhcCHHHHHHH-HHhcCChhhCc---CHHHHhcCcccc
Confidence 555444443322 23456667889999999 57778999999 999999999995
No 155
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.1e-40 Score=351.07 Aligned_cols=257 Identities=34% Similarity=0.606 Sum_probs=222.5
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++.+.||.|+||.||+|++..+++.||+|++.... .......+.+|+.+++.++||||+++++.+.+...+|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 46899999999999999999999999999999987543 2334467889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||+++++|.+++... .+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||+++.....
T Consensus 79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~------ 151 (274)
T cd06609 79 EYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTST------ 151 (274)
T ss_pred EeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccc------
Confidence 999999999999764 7899999999999999999999999999999999999999999999999998741100
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
........|++.|+|||++.+..++.++|||||||++|+|++|.+||...+....
T Consensus 152 -------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~ 206 (274)
T cd06609 152 -------------------------MSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV 206 (274)
T ss_pred -------------------------ccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH
Confidence 0012235789999999999998899999999999999999999999988777666
Q ss_pred HHhhhccCCCCCCCCCC-CCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCC
Q 001783 829 FDNILNRKIPWPRVPEE-MSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~-lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Id 884 (1013)
...+..... +..+.. ++.++.++|.+||..+|.+|| +++++++||||.+..
T Consensus 207 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~p~~Rp---t~~~il~~~~~~~~~ 258 (274)
T cd06609 207 LFLIPKNNP--PSLEGNKFSKPFKDFVSLCLNKDPKERP---SAKELLKHKFIKKAK 258 (274)
T ss_pred HHHhhhcCC--CCCcccccCHHHHHHHHHHhhCChhhCc---CHHHHhhChhhcCCC
Confidence 665554432 333344 889999999999999999999 999999999998653
No 156
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=6.7e-41 Score=364.80 Aligned_cols=264 Identities=25% Similarity=0.411 Sum_probs=209.6
Q ss_pred EEEEeecc--CceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEe
Q 001783 593 IIKPISRG--AFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1013)
Q Consensus 593 Ilk~LGkG--~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy 670 (1013)
++++||+| +|++||++.++.+|+.||+|++..... .......+.+|+.+++.++||||++++++|..++.+|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 56789999 789999999999999999999876432 234456778899999999999999999999999999999999
Q ss_pred ccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 671 LNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 671 ~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
+++|+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.++++|||.+.... ...
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~-~~~---- 155 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI-NHG---- 155 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccc-ccc----
Confidence 9999999999653 458999999999999999999999999999999999999999999999998754210 000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc--CCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG--TGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g--~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
... . ..........++..|+|||++.+ ..|+.++|||||||++|||++|+.||......
T Consensus 156 -~~~---~---------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 216 (327)
T cd08227 156 -QRL---R---------------VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT 216 (327)
T ss_pred -ccc---c---------------ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchh
Confidence 000 0 00001123467888999999976 46899999999999999999999999765544
Q ss_pred HHHHhhhccCCCC-------------------------------------------CCCCCCCCHHHHHHHHHhccCCcC
Q 001783 827 QIFDNILNRKIPW-------------------------------------------PRVPEEMSPEAHDLIDRFLTEDPH 863 (1013)
Q Consensus 827 ei~qkIl~~~~~~-------------------------------------------p~lp~~lS~elkDLI~rMLqkDPe 863 (1013)
...........+. ......+++++.+||.+||+.||.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~ 296 (327)
T cd08227 217 QMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPD 296 (327)
T ss_pred HHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCch
Confidence 3333322211100 001123577899999999999999
Q ss_pred CcCCCCCHHHHHhCCCCCCCC
Q 001783 864 QRLGSGGASEVKQHVFFKDIN 884 (1013)
Q Consensus 864 kRPg~~TAeELLqHPFFk~Id 884 (1013)
+|| |++++++||||+++.
T Consensus 297 ~Rp---t~~ell~~p~f~~~~ 314 (327)
T cd08227 297 ARP---SASTLLNHSFFKQIK 314 (327)
T ss_pred hcC---CHHHHhcChhhhhcc
Confidence 999 999999999998764
No 157
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4.2e-40 Score=342.03 Aligned_cols=254 Identities=28% Similarity=0.506 Sum_probs=223.3
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++++.||.|+||.||++++..+++.+++|.+...... ......+.+|+.++++++|+||+++++++.+.+.++++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-EKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 489999999999999999999999999999998765432 3445678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 670 y~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|++|++|.+++.+. ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~---- 155 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY---- 155 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc----
Confidence 99999999999765 468999999999999999999999999999999999999999999999999987411000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+
T Consensus 156 ---------------------------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~ 208 (256)
T cd08221 156 ---------------------------SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN 208 (256)
T ss_pred ---------------------------ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 01123578999999999998889999999999999999999999999988888
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 828 i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
....+..... +..+..++.++.++|.+||+.+|.+|| ++.++++|||+
T Consensus 209 ~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~R~---s~~~ll~~~~l 256 (256)
T cd08221 209 LVVKIVQGNY--TPVVSVYSSELISLVHSLLQQDPEKRP---TADEVLDQPLL 256 (256)
T ss_pred HHHHHHcCCC--CCCccccCHHHHHHHHHHcccCcccCC---CHHHHhhCcCC
Confidence 8878776543 334567899999999999999999999 99999999996
No 158
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=356.67 Aligned_cols=242 Identities=18% Similarity=0.219 Sum_probs=211.3
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec----cceEEEEEEe
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC----RENLYLVMEY 670 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed----~~~LyLVMEy 670 (1013)
..||+|++|.||+|.. +|+.||+|++++.........+.+.+|+.+|.+++||||+++++++.+ ...+|+||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 5789999999999987 688999999987655455556788899999999999999999999877 3578999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 671 LNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 671 ~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
++||+|.+++.+.+.+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+++....
T Consensus 104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~-------- 175 (283)
T PHA02988 104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSS-------- 175 (283)
T ss_pred CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcc--------
Confidence 9999999999888889999999999999999999998 5999999999999999999999999999873100
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc--CCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG--TGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g--~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
.....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+
T Consensus 176 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~ 229 (283)
T PHA02988 176 --------------------------PPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE 229 (283)
T ss_pred --------------------------ccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH
Confidence 0112468999999999976 679999999999999999999999999988888
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 828 i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
++..+...... +..+..+++++.+||.+||+.||.+|| ++.++++
T Consensus 230 ~~~~i~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~ell~ 274 (283)
T PHA02988 230 IYDLIINKNNS-LKLPLDCPLEIKCIVEACTSHDSIKRP---NIKEILY 274 (283)
T ss_pred HHHHHHhcCCC-CCCCCcCcHHHHHHHHHHhcCCcccCc---CHHHHHH
Confidence 88887665544 335557899999999999999999999 8988875
No 159
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-40 Score=357.62 Aligned_cols=260 Identities=34% Similarity=0.565 Sum_probs=220.5
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEE
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~Ly 665 (1013)
....+|++++.||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++.+....++|
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~ 92 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 92 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEE
Confidence 334779999999999999999999999999999999875432 23466789999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
+||||++|++|.+++.+ ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 93 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~--- 168 (297)
T cd06656 93 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--- 168 (297)
T ss_pred EeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCC---
Confidence 99999999999999865 56899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
........|++.|+|||.+.+..++.++|+|||||++|+|++|.+||.+.+.
T Consensus 169 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~ 220 (297)
T cd06656 169 ----------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP 220 (297)
T ss_pred ----------------------------ccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence 0011234689999999999998899999999999999999999999987665
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
......+.....+....+..++..+.+||.+||..||.+|| ++.++++||||+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~~~~~~~~ 275 (297)
T cd06656 221 LRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRG---SAKELLQHPFLKLA 275 (297)
T ss_pred chheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCc---CHHHHhcCchhccc
Confidence 44433333333222234567889999999999999999999 99999999999853
No 160
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=5.3e-40 Score=349.37 Aligned_cols=259 Identities=33% Similarity=0.540 Sum_probs=214.5
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeecc--
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCR-- 661 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~-- 661 (1013)
+...++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.++.++ +||||+++++++...
T Consensus 18 ~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~ 93 (291)
T cd06639 18 GDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK 93 (291)
T ss_pred CCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc
Confidence 344578999999999999999999999999999999986532 1235567899999988 899999999988754
Q ss_pred ---ceEEEEEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecC
Q 001783 662 ---ENLYLVMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFG 734 (1013)
Q Consensus 662 ---~~LyLVMEy~~GGSL~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFG 734 (1013)
...|+||||++|++|.+++.. ...+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg 173 (291)
T cd06639 94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFG 173 (291)
T ss_pred cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecc
Confidence 368999999999999998853 3568999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-----CCCccceeechhHH
Q 001783 735 LSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-----GHGTTADWWSVGII 809 (1013)
Q Consensus 735 LAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-----~ys~ksDIWSLGVI 809 (1013)
++...... ........|+..|+|||++... .++.++|||||||+
T Consensus 174 ~~~~~~~~-------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi 222 (291)
T cd06639 174 VSAQLTST-------------------------------RLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGIT 222 (291)
T ss_pred cchhcccc-------------------------------cccccCccCCccccChhhhcCCCCcccccCCccchHHHHHH
Confidence 98731000 0011234689999999998643 36889999999999
Q ss_pred HHHHHhCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCC
Q 001783 810 LFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 810 LYELLTGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk 881 (1013)
+|+|++|++||...........+.....+....+...+..+.+||.+||+++|.+|| ++.++++||||+
T Consensus 223 ~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---s~~~il~~~~~~ 291 (291)
T cd06639 223 AIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARP---SVTHLLEHPFIK 291 (291)
T ss_pred HHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCc---CHHHHhcCcccC
Confidence 999999999998877665555554443322223456788999999999999999999 999999999994
No 161
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.4e-40 Score=352.72 Aligned_cols=264 Identities=24% Similarity=0.385 Sum_probs=219.1
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC 660 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~-----tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed 660 (1013)
...++|++.+.||+|+||.||+|.++. .+..||+|++..... ......+.+|+.+++.++||||+++++++.+
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS--LRERIEFLNEASVMKGFTCHHVVRLLGVVSK 80 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 345789999999999999999997652 355899998865432 2334567889999999999999999999999
Q ss_pred cceEEEEEEeccCCChHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEE
Q 001783 661 RENLYLVMEYLNGGDLYSLLRNL----------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKL 730 (1013)
Q Consensus 661 ~~~LyLVMEy~~GGSL~dlL~~~----------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKL 730 (1013)
....|+||||+++|+|.+++.+. ..++...+..++.||+.||.|||++||+||||||+|||++.++.++|
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEE
Confidence 99999999999999999999753 22466788899999999999999999999999999999999999999
Q ss_pred eecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHH
Q 001783 731 TDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIIL 810 (1013)
Q Consensus 731 iDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVIL 810 (1013)
+|||+++....... ........++..|+|||.+.+..++.++|+|||||++
T Consensus 161 ~Dfg~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l 211 (288)
T cd05061 161 GDFGMTRDIYETDY-----------------------------YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 211 (288)
T ss_pred CcCCcccccccccc-----------------------------ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHH
Confidence 99999873110000 0001123467789999999988899999999999999
Q ss_pred HHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh------CCCCCCC
Q 001783 811 FELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ------HVFFKDI 883 (1013)
Q Consensus 811 YELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq------HPFFk~I 883 (1013)
|||++ |.+||.+....+....+..... +..+..+++.+.++|.+||+.||.+|| ++.++++ ||||.++
T Consensus 212 ~el~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 212 WEITSLAEQPYQGLSNEQVLKFVMDGGY--LDQPDNCPERVTDLMRMCWQFNPKMRP---TFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCChhHCc---CHHHHHHHHHhhcCCCCCCC
Confidence 99998 7999998888777777665432 344567889999999999999999999 8888877 9999999
Q ss_pred Ch
Q 001783 884 NW 885 (1013)
Q Consensus 884 dw 885 (1013)
+|
T Consensus 287 ~~ 288 (288)
T cd05061 287 SF 288 (288)
T ss_pred CC
Confidence 98
No 162
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=5.7e-41 Score=354.33 Aligned_cols=255 Identities=32% Similarity=0.533 Sum_probs=207.9
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++.+.||.|+||.||+|+++.+|+.||+|+++.... .......+.+|+.+++.++||||+++++++.+...+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 48999999999999999999999999999999875432 22233567789999999999999999999999999999999
Q ss_pred eccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 670 YLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 670 y~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
|+.+ +|.+++.+ .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~------ 152 (284)
T cd07839 80 YCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP------ 152 (284)
T ss_pred cCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC------
Confidence 9975 88887765 467999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCC-CCCChh
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPF-NAEHPQ 826 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF-~g~~~~ 826 (1013)
........+++.|+|||++.+. .++.++|||||||++|+|++|..|| .+.+..
T Consensus 153 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~ 207 (284)
T cd07839 153 -------------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 207 (284)
T ss_pred -------------------------CCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH
Confidence 0011234678999999998774 4789999999999999999988775 444444
Q ss_pred HHHHhhhccC-----------------CCCC---------CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 827 QIFDNILNRK-----------------IPWP---------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 827 ei~qkIl~~~-----------------~~~p---------~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
+.+..+.... ..++ .....+++++.+||.+||+.||.+|| |++++++||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---t~~~il~h~~f 284 (284)
T cd07839 208 DQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRI---SAEEALQHPYF 284 (284)
T ss_pred HHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcC---CHHHHhcCCCC
Confidence 4444332210 0011 11235789999999999999999999 99999999998
No 163
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=3.2e-40 Score=340.99 Aligned_cols=254 Identities=31% Similarity=0.586 Sum_probs=219.9
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec--cceEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC--RENLYLV 667 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed--~~~LyLV 667 (1013)
+|++++.||.|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++.++||||+++++.+.. ...+|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 58999999999999999999999999999999876543 33445778899999999999999999987764 4568999
Q ss_pred EEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-----hCCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 668 MEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLH-----SLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLH-----s~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
|||+++++|.+++.+ .+.+++..++.++.||+.||.||| +.+|+|+||||+||+++.++.+||+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 999999999999965 357899999999999999999999 99999999999999999999999999999873
Q ss_pred cccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCC
Q 001783 739 GLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIP 818 (1013)
Q Consensus 739 ~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~ 818 (1013)
.... ........|++.|+|||++.+..++.++|+||||+++|+|++|..
T Consensus 160 ~~~~-------------------------------~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~ 208 (265)
T cd08217 160 LGHD-------------------------------SSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSP 208 (265)
T ss_pred ccCC-------------------------------cccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCC
Confidence 1000 001123578999999999998889999999999999999999999
Q ss_pred CCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 819 PFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 819 PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
||...+.....+.+.... ++.++..++..+.+|+.+||..+|.+|| ++.+|++|||+
T Consensus 209 p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~p~~Rp---~~~~il~~~~~ 265 (265)
T cd08217 209 PFTARNQLQLASKIKEGK--FRRIPYRYSSELNEVIKSMLNVDPDKRP---STEELLQLPLI 265 (265)
T ss_pred cccCcCHHHHHHHHhcCC--CCCCccccCHHHHHHHHHHccCCcccCC---CHHHHhhCCCC
Confidence 999888777776665543 3456778899999999999999999999 99999999996
No 164
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.5e-40 Score=348.32 Aligned_cols=253 Identities=28% Similarity=0.503 Sum_probs=210.6
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeecc------
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCR------ 661 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~------ 661 (1013)
+.|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.++..+ +||||+++++.|...
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45899999999999999999999999999999987542 2235678899999988 699999999998753
Q ss_pred ceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccc
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVG 739 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~ 739 (1013)
..+|+||||+++++|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||+++..
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 4689999999999999999763 46899999999999999999999999999999999999999999999999998731
Q ss_pred ccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHHHH
Q 001783 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFELI 814 (1013)
Q Consensus 740 ~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~ksDIWSLGVILYELL 814 (1013)
... ........|++.|+|||++. +..++.++|||||||++|||+
T Consensus 162 ~~~-------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~ 210 (272)
T cd06637 162 DRT-------------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 210 (272)
T ss_pred ccc-------------------------------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHH
Confidence 000 01123457999999999986 345788999999999999999
Q ss_pred hCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 815 VGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 815 TGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
+|..||...........+...... ...+..++.++.+||.+||..||.+|| ++.+++.||||
T Consensus 211 ~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~il~~~~~ 272 (272)
T cd06637 211 EGAPPLCDMHPMRALFLIPRNPAP-RLKSKKWSKKFQSFIESCLVKNHSQRP---TTEQLMKHPFI 272 (272)
T ss_pred hCCCCccccCHHHHHHHHhcCCCC-CCCCCCcCHHHHHHHHHHcCCChhhCC---CHHHHhhCCCC
Confidence 999999776655444444332211 122346789999999999999999999 99999999998
No 165
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-42 Score=392.35 Aligned_cols=261 Identities=32% Similarity=0.573 Sum_probs=236.2
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
+-|+|+..||.|+||+||+|..+.++-..|-|++.. ...+.++.++-|++||..++||+||+|++.|..++.++|+.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 348999999999999999999999999999998864 34667889999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|||.||-+..++... ..|++.+++.+.+|+|.||.|||+++|||||||..|||++.+|.|+|+|||.+-.
T Consensus 109 EFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAK--------- 179 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAK--------- 179 (1187)
T ss_pred eecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeeccccccc---------
Confidence 999999999888665 4699999999999999999999999999999999999999999999999998652
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
......+..+++|||+|||||++. ..+|++++||||||++|.||..+.||-..
T Consensus 180 ----------------------n~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe 237 (1187)
T KOG0579|consen 180 ----------------------NKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE 237 (1187)
T ss_pred ----------------------chhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc
Confidence 012244567899999999999975 46899999999999999999999999999
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChh
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWD 886 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~ 886 (1013)
-++..++-+|.+...+-...|..++..+.||+.+||.+||..|| ++.+||+||||.++.-.
T Consensus 238 lnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp---~aaqll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 238 LNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRP---PAAQLLKHPFVQNAPSN 298 (1187)
T ss_pred cchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCC---CHHHHhhCcccccCCcc
Confidence 99999999998887766566889999999999999999999999 99999999999987654
No 166
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=4.2e-40 Score=340.59 Aligned_cols=253 Identities=29% Similarity=0.519 Sum_probs=220.1
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++++.||.|+||.||+|.+..+++.+|+|++...... ......+.+|+.+++.++||||+++++.+...+.+|+|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 589999999999999999999999999999999765432 3345788899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC-cEEEeecCCccccccCCCCC
Q 001783 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-HIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 670 y~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG-~VKLiDFGLAk~~~~~s~dd 746 (1013)
|++|++|.+++... ..+++..+..++.|++.||+|||++||+|+||||+||+++.++ .+||+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~----- 154 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS----- 154 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC-----
Confidence 99999999999764 3589999999999999999999999999999999999998654 689999999873100
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+..
T Consensus 155 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~ 207 (256)
T cd08220 155 ---------------------------KSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP 207 (256)
T ss_pred ---------------------------CccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH
Confidence 00112346899999999999888999999999999999999999999988877
Q ss_pred HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
.....+..... ..++..++.++.+||.+||..||.+|| ++.++++||||
T Consensus 208 ~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~ll~~p~~ 256 (256)
T cd08220 208 ALVLKIMSGTF--APISDRYSPDLRQLILSMLNLDPSKRP---QLSQIMAQPIC 256 (256)
T ss_pred HHHHHHHhcCC--CCCCCCcCHHHHHHHHHHccCChhhCC---CHHHHhhCCCC
Confidence 77777665433 345667899999999999999999999 99999999997
No 167
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.8e-40 Score=348.35 Aligned_cols=256 Identities=34% Similarity=0.560 Sum_probs=210.2
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeee-----c
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFT-----C 660 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fe-----d 660 (1013)
..++|++++.||+|+||+||+|.+..+++.||+|++.... .....+.+|+.++..+ +||||+++++++. .
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 91 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN 91 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence 4578999999999999999999999999999999986532 1234577899999998 6999999999874 3
Q ss_pred cceEEEEEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCc
Q 001783 661 RENLYLVMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1013)
Q Consensus 661 ~~~LyLVMEy~~GGSL~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1013)
...+|+||||++|++|.+++.. ...+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence 4579999999999999988753 256899999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHHH
Q 001783 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIILF 811 (1013)
Q Consensus 737 k~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILY 811 (1013)
+..... ........||+.|+|||++.+ ..++.++|||||||++|
T Consensus 172 ~~~~~~-------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~ 220 (286)
T cd06638 172 AQLTST-------------------------------RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAI 220 (286)
T ss_pred eecccC-------------------------------CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHH
Confidence 731000 001223469999999999853 45788999999999999
Q ss_pred HHHhCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 812 ELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 812 ELLTGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
||++|+.||...........+.....+....+..++.++.+||.+||+.||.+|| ++.++++|+||
T Consensus 221 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~ell~~~~~ 286 (286)
T cd06638 221 ELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRP---TVSDLLQHVFI 286 (286)
T ss_pred HHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCC---CHHHHhhcccC
Confidence 9999999998776544444433322211223445688999999999999999999 99999999997
No 168
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.3e-40 Score=351.38 Aligned_cols=256 Identities=24% Similarity=0.407 Sum_probs=218.2
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCC-----CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTG-----DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC 660 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tg-----k~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed 660 (1013)
..+++|++++.||+|+||.||+|.+...+ ..||+|.++... .......+.+|+.++..++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 79 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK 79 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcC
Confidence 34578999999999999999999986555 689999987542 23445678899999999999999999999999
Q ss_pred cceEEEEEEeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC
Q 001783 661 RENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH 724 (1013)
Q Consensus 661 ~~~LyLVMEy~~GGSL~dlL~~~----------------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~ 724 (1013)
....|++|||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE 159 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence 99999999999999999999764 45788999999999999999999999999999999999999
Q ss_pred CCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceee
Q 001783 725 DGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWW 804 (1013)
Q Consensus 725 dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIW 804 (1013)
++.++|+|||+++...... .........+|+.|+|||++.+..++.++|||
T Consensus 160 ~~~~~L~dfg~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~ 210 (283)
T cd05048 160 GLTVKISDFGLSRDIYSAD-----------------------------YYRVQSKSLLPVRWMPPEAILYGKFTTESDIW 210 (283)
T ss_pred CCcEEECCCcceeeccccc-----------------------------cccccCCCcccccccCHHHhccCcCchhhhHH
Confidence 9999999999987311000 00111234678899999999988899999999
Q ss_pred chhHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 805 SVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 805 SLGVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
||||++|||++ |..||.+.+..++...+..... +..+..+++++.+|+.+||+.||.+|| ++.+|+++
T Consensus 211 slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~l~~~c~~~~p~~Rp---~~~~i~~~ 279 (283)
T cd05048 211 SFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQL--LPCPEDCPARVYALMIECWNEIPARRP---RFKDIHTR 279 (283)
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCcccCCHHHHHHHHHHccCChhhCc---CHHHHHHH
Confidence 99999999998 9999999888888877765543 345678999999999999999999999 99999875
No 169
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.5e-40 Score=344.36 Aligned_cols=255 Identities=31% Similarity=0.532 Sum_probs=213.6
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccc----
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRE---- 662 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~---- 662 (1013)
.++|++.+.||.|+||.||+|.++.+++.|++|++..... ..+.+.+|+.+++++ +||||+++++.+....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 3789999999999999999999999999999999876432 346788999999998 7999999999997644
Q ss_pred --eEEEEEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCc
Q 001783 663 --NLYLVMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1013)
Q Consensus 663 --~LyLVMEy~~GGSL~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1013)
.+|+||||+++++|.+++.. ...+++..++.++.|++.||+|||+.||+|+||+|+||+++.++.++|+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 58999999999999998865 357999999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHHH
Q 001783 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIILF 811 (1013)
Q Consensus 737 k~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILY 811 (1013)
..... .........|++.|+|||++.. ..++.++|||||||++|
T Consensus 161 ~~~~~-------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~ 209 (275)
T cd06608 161 AQLDS-------------------------------TLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAI 209 (275)
T ss_pred eeccc-------------------------------chhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHH
Confidence 63100 0011234578999999999864 34678899999999999
Q ss_pred HHHhCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 812 ELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 812 ELLTGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
+|++|.+||...........+.....+....+..++..+.+||.+||..||.+|| ++.++++|||+
T Consensus 210 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---t~~~ll~~~~~ 275 (275)
T cd06608 210 ELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRP---FMEELLEHPFI 275 (275)
T ss_pred HHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCc---CHHHHhcCCCC
Confidence 9999999998766655555555443322222344788999999999999999999 99999999996
No 170
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.3e-40 Score=355.15 Aligned_cols=257 Identities=36% Similarity=0.591 Sum_probs=221.6
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
..+|++++.||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++.+...+.+|+|
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEE
Confidence 3569999999999999999999999999999999875432 2346778999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|||++|++|..++.. ..+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++......
T Consensus 95 ~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~----- 168 (296)
T cd06655 95 MEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE----- 168 (296)
T ss_pred EEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccc-----
Confidence 999999999998865 46899999999999999999999999999999999999999999999999988631000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
........|++.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+...
T Consensus 169 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~ 222 (296)
T cd06655 169 --------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 222 (296)
T ss_pred --------------------------cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 001123468999999999998889999999999999999999999998887765
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 828 i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
....+.....+....+..+++.+.+||.+||..||.+|| ++.++++||||+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---t~~~il~~~~~~~ 274 (296)
T cd06655 223 ALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRG---SAKELLQHPFLKL 274 (296)
T ss_pred HHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCC---CHHHHhhChHhhh
Confidence 555554433333344667899999999999999999999 9999999999975
No 171
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.9e-41 Score=371.31 Aligned_cols=250 Identities=27% Similarity=0.422 Sum_probs=201.7
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
.+|++++.||+|+||.||+|++..+++.||+|+..+. ....|+.+++.++||||+++++++......|+||
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 4699999999999999999999999999999986543 2346899999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|++. ++|.+++.+ ...+++..++.++.||+.||.|||++|||||||||+|||++.++.+||+|||+++....
T Consensus 137 e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~------ 209 (357)
T PHA03209 137 PHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV------ 209 (357)
T ss_pred EccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccccccc------
Confidence 9996 588888865 46799999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCC-CCCCCCChh
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGI-PPFNAEHPQ 826 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk-~PF~g~~~~ 826 (1013)
........||+.|+|||++.+..++.++|||||||++|||+++. ++|......
T Consensus 210 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~ 263 (357)
T PHA03209 210 --------------------------APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPST 263 (357)
T ss_pred --------------------------CcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCc
Confidence 00112357999999999999999999999999999999999854 444432110
Q ss_pred ---------HHHHhhhcc----CCCCC-----------------------C----CCCCCCHHHHHHHHHhccCCcCCcC
Q 001783 827 ---------QIFDNILNR----KIPWP-----------------------R----VPEEMSPEAHDLIDRFLTEDPHQRL 866 (1013)
Q Consensus 827 ---------ei~qkIl~~----~~~~p-----------------------~----lp~~lS~elkDLI~rMLqkDPekRP 866 (1013)
..+..+... ...++ . ....++.++.+||.+||+.||.+||
T Consensus 264 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rp 343 (357)
T PHA03209 264 PEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRP 343 (357)
T ss_pred HHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCc
Confidence 111111110 00011 0 0024577888999999999999999
Q ss_pred CCCCHHHHHhCCCCCCC
Q 001783 867 GSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 867 g~~TAeELLqHPFFk~I 883 (1013)
||.|+|+||||+++
T Consensus 344 ---ta~e~l~hp~f~~~ 357 (357)
T PHA03209 344 ---SAEEILNYPMFAQL 357 (357)
T ss_pred ---CHHHHhcCchhccC
Confidence 99999999999864
No 172
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.8e-40 Score=345.80 Aligned_cols=254 Identities=33% Similarity=0.600 Sum_probs=218.4
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++.+.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+.+++.++||||+++++.+.....+|++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 468889999999999999999999999999999876532 244567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
||+++++|.+++... ..+++..+..++.||+.||+|||+ .|++|+||||+||+++.++.++|+|||++....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~------ 152 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV------ 152 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhH------
Confidence 999999999999876 789999999999999999999999 999999999999999999999999999876310
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC---
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE--- 823 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~--- 823 (1013)
........|+..|+|||.+.+..++.++|||||||++|+|++|..||...
T Consensus 153 ---------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~ 205 (265)
T cd06605 153 ---------------------------NSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP 205 (265)
T ss_pred ---------------------------HHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc
Confidence 00011267899999999999999999999999999999999999999754
Q ss_pred --ChhHHHHhhhccCCCCCCCCCC-CCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 824 --HPQQIFDNILNRKIPWPRVPEE-MSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 824 --~~~ei~qkIl~~~~~~p~lp~~-lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
...+..+.+.... .+..+.. ++.++.+||.+||..||.+|| ++.+++.||||+.
T Consensus 206 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~ll~~~~~~~ 262 (265)
T cd06605 206 PDGIFELLQYIVNEP--PPRLPSGKFSPDFQDFVNLCLIKDPRERP---SYKELLEHPFIKK 262 (265)
T ss_pred cccHHHHHHHHhcCC--CCCCChhhcCHHHHHHHHHHcCCCchhCc---CHHHHhhCchhhc
Confidence 2334444444332 2334444 889999999999999999999 9999999999974
No 173
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.7e-40 Score=345.67 Aligned_cols=275 Identities=40% Similarity=0.745 Sum_probs=229.0
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccceEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~LyLV 667 (1013)
++|++.+.||.|+||.||+|.+..+++.||+|++.+...........+.+|..++..++ ||||+++++.+...+.+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47999999999999999999999999999999998765545555678889999999998 99999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|||+.+++|.+++.+.+.+++..+..++.||+.||.|||++|++|+||||+||+++.+|.++|+|||++...........
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~ 160 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES 160 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence 99999999999999888899999999999999999999999999999999999999999999999999874211110000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
. ... .. .................|+..|+|||++.+..++.++|+|||||++|+|++|..||.......
T Consensus 161 ~-~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 229 (280)
T cd05581 161 N-KGD-AT---------NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL 229 (280)
T ss_pred C-CCC-Cc---------cccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 0 000 00 000000011123345678999999999998889999999999999999999999999888777
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCH----HHHHhCCCC
Q 001783 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGA----SEVKQHVFF 880 (1013)
Q Consensus 828 i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TA----eELLqHPFF 880 (1013)
.++.+...... ++..+++.+.+||.+||+.+|.+|| ++ +++++||||
T Consensus 230 ~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~---~~~~~~~~ll~~~~~ 280 (280)
T cd05581 230 TFQKILKLEYS---FPPNFPPDAKDLIEKLLVLDPQDRL---GVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHHhcCCC---CCCccCHHHHHHHHHHhcCCHhhCC---CcccCHHHHhcCCCC
Confidence 77777654443 4557899999999999999999999 89 999999998
No 174
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=367.21 Aligned_cols=266 Identities=28% Similarity=0.518 Sum_probs=227.3
Q ss_pred cEEE-EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccceEEEEE
Q 001783 591 FEII-KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 591 YeIl-k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~LyLVM 668 (1013)
|++. +.||+|+|+.|--|....+|..||||++.|.. .....++.+|++++..++ |+||++|+++|+++..+||||
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf 155 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF 155 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence 5543 67999999999999999999999999998753 345578999999999985 999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC---cEEEeecCCccccccCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG---HIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG---~VKLiDFGLAk~~~~~s~d 745 (1013)
|-|.||+|..+|.+...|+|.++..++++|+.||+|||.+||.||||||+|||..... -||||||.|..- . .-+.
T Consensus 156 EKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg-~-k~~~ 233 (463)
T KOG0607|consen 156 EKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG-I-KLNN 233 (463)
T ss_pred ecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc-c-ccCC
Confidence 9999999999999999999999999999999999999999999999999999997654 489999998762 1 1111
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHHHHhCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
+.+ +.. .....+.+|+..|||||+.. ...|+.++|.||||||+|-||+|.+||
T Consensus 234 ~~s-pas---------------------tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPF 291 (463)
T KOG0607|consen 234 DCS-PAS---------------------TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPF 291 (463)
T ss_pred CCC-CCC---------------------CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCc
Confidence 111 110 11234679999999999874 245899999999999999999999999
Q ss_pred CCC---------------ChhHHHHhhhccCCCCCC-CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCC
Q 001783 821 NAE---------------HPQQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1013)
Q Consensus 821 ~g~---------------~~~ei~qkIl~~~~~~p~-lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Id 884 (1013)
.+. -...+++.|..+.+.||. -+..+|.+++|||+.+|.+|+.+|+ +|.++++|||+..+.
T Consensus 292 vG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rl---sa~~vlnhPw~~~~~ 368 (463)
T KOG0607|consen 292 VGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRL---SAAQVLNHPWVQRCA 368 (463)
T ss_pred cCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhh---hhhhccCCccccccc
Confidence 653 146789999999998884 3567999999999999999999999 999999999998764
Q ss_pred hh
Q 001783 885 WD 886 (1013)
Q Consensus 885 w~ 886 (1013)
-+
T Consensus 369 ~e 370 (463)
T KOG0607|consen 369 PE 370 (463)
T ss_pred hh
Confidence 43
No 175
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.8e-40 Score=350.96 Aligned_cols=269 Identities=44% Similarity=0.840 Sum_probs=224.1
Q ss_pred CcEEEEEeeccCceEEEEEEEC---CCCCEEEEEEeeccccc-cHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKR---TTGDLFAIKVLKKADMI-RKNAVESILAERDILISV-RNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk---~tgk~VALKVlkk~~~~-~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~L 664 (1013)
+|++.+.||+|+||.||+|++. .+++.||+|++++.... .......+.+|+.++..+ +||||+++++.+.....+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4899999999999999999864 46789999999764332 233456788999999999 599999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+||||+.+|+|.+++...+.+++..++.++.|++.||.|||+.|++||||||.||+++.++.++|+|||+++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 158 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE-- 158 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc--
Confidence 999999999999999987778999999999999999999999999999999999999999999999999998631100
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC--CCccceeechhHHHHHHHhCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG--HGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~--ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
.........|++.|+|||.+.+.. ++.++|+||||+++|+|++|..||..
T Consensus 159 ----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 210 (288)
T cd05583 159 ----------------------------EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV 210 (288)
T ss_pred ----------------------------cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCccc
Confidence 000112356899999999987754 78899999999999999999999964
Q ss_pred CC----hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhh
Q 001783 823 EH----PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQ 891 (1013)
Q Consensus 823 ~~----~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~ 891 (1013)
.. ..+..+.+.... +..+..++..+.+||.+||+.||++||+..++.++|+||||++++|+.+...
T Consensus 211 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~~~~~~ 280 (288)
T cd05583 211 DGEQNSQSEISRRILKSK---PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDDLAAK 280 (288)
T ss_pred CcccchHHHHHHHHHccC---CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHHHHhhh
Confidence 32 223333333332 2345678899999999999999999997777899999999999999988654
No 176
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.4e-40 Score=350.97 Aligned_cols=257 Identities=29% Similarity=0.499 Sum_probs=213.9
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++++.||+|+||.||+|.+..+++.||+|++.+..... ...+.+.+|+.+++.++||||+++++++......|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 46999999999999999999999899999999987643322 34466788999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||++++.|..+....+.+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~------ 153 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP------ 153 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCC------
Confidence 99999999888877667999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
........|+..|+|||++.+ ..++.++|||||||++|||++|.+||......+
T Consensus 154 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~ 208 (286)
T cd07846 154 -------------------------GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID 208 (286)
T ss_pred -------------------------ccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH
Confidence 001123568899999999876 447889999999999999999999998766544
Q ss_pred HHHhhhccC-------------------CCCCC---------CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCC
Q 001783 828 IFDNILNRK-------------------IPWPR---------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1013)
Q Consensus 828 i~qkIl~~~-------------------~~~p~---------lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPF 879 (1013)
....+.... ...+. ....++..+.+||.+||..+|.+|| ++.++++|||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---~~~~il~~~~ 285 (286)
T cd07846 209 QLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRP---SSSQLLHHEF 285 (286)
T ss_pred HHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccch---hHHHHhcCCC
Confidence 333332210 00111 1235788999999999999999999 9999999999
Q ss_pred C
Q 001783 880 F 880 (1013)
Q Consensus 880 F 880 (1013)
|
T Consensus 286 ~ 286 (286)
T cd07846 286 F 286 (286)
T ss_pred C
Confidence 8
No 177
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=5.7e-40 Score=340.41 Aligned_cols=258 Identities=33% Similarity=0.590 Sum_probs=223.2
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++.+.||.|++|.||+|++..+++.||+|++...... .....+.+|+.++..++||||+++++.+.....+|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 4699999999999999999999999999999998765422 44578899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||+++++|.+++...+.+++..+..++.||+.||+|||+ .|++||||+|+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~----- 153 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENT----- 153 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccC-----
Confidence 999999999999887889999999999999999999999 99999999999999999999999999998731000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC---C
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE---H 824 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~---~ 824 (1013)
........|+..|+|||.+.+..++.++|+||||+++|+|++|..||... .
T Consensus 154 --------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~ 207 (264)
T cd06623 154 --------------------------LDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS 207 (264)
T ss_pred --------------------------CCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC
Confidence 00112346889999999999988999999999999999999999999776 4
Q ss_pred hhHHHHhhhccCCCCCCCCCC-CCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCC
Q 001783 825 PQQIFDNILNRKIPWPRVPEE-MSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~-lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Id 884 (1013)
..+....+..... +..+.. ++..+.++|.+||..+|.+|| ++.++++||||+.++
T Consensus 208 ~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~R~---~~~~ll~~~~~~~~~ 263 (264)
T cd06623 208 FFELMQAICDGPP--PSLPAEEFSPEFRDFISACLQKDPKKRP---SAAELLQHPFIKKAD 263 (264)
T ss_pred HHHHHHHHhcCCC--CCCCcccCCHHHHHHHHHHccCChhhCC---CHHHHHhCHHHHhcc
Confidence 4455555553322 334555 889999999999999999999 999999999998653
No 178
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=8e-40 Score=340.36 Aligned_cols=250 Identities=28% Similarity=0.521 Sum_probs=217.4
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++.+.||.|+||.||+++++.+++.||+|.++.... ....+.+.+|+.+++.++||||+++++.+.+.+.+|+|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 58999999999999999999999999999999875432 3345678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 670 y~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|+++|+|.+++... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~------ 152 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS------ 152 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecc------
Confidence 99999999988653 4589999999999999999999999999999999999999999999999999863100
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
.........|++.|+|||++.+..++.++|+||||+++|+|++|..||...+...
T Consensus 153 -------------------------~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~ 207 (255)
T cd08219 153 -------------------------PGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN 207 (255)
T ss_pred -------------------------cccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH
Confidence 0001123578999999999999889999999999999999999999999888877
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 828 i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
....+..... +.++..++..+.+||.+||+.||.+|| ++.+++.-
T Consensus 208 ~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rp---~~~~il~~ 252 (255)
T cd08219 208 LILKVCQGSY--KPLPSHYSYELRSLIKQMFKRNPRSRP---SATTILSR 252 (255)
T ss_pred HHHHHhcCCC--CCCCcccCHHHHHHHHHHHhCCcccCC---CHHHHhhc
Confidence 7777765443 335667899999999999999999999 99999864
No 179
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=6.1e-40 Score=346.75 Aligned_cols=254 Identities=28% Similarity=0.475 Sum_probs=210.5
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeec------
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTC------ 660 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed------ 660 (1013)
.+.|++.+.||.|+||.||+|++..+++.||+|++.... .....+..|+.++..+ +||||++++++|..
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 367999999999999999999999999999999986542 2345678899999888 79999999999853
Q ss_pred cceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 661 RENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 661 ~~~LyLVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
...+|++|||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++..
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 45789999999999999999653 4588999999999999999999999999999999999999999999999999863
Q ss_pred cccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHHH
Q 001783 739 GLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFEL 813 (1013)
Q Consensus 739 ~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~ksDIWSLGVILYEL 813 (1013)
... .........|++.|+|||++. +..++.++|||||||++|||
T Consensus 171 ~~~-------------------------------~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el 219 (282)
T cd06636 171 LDR-------------------------------TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEM 219 (282)
T ss_pred hhc-------------------------------cccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHH
Confidence 100 001123457999999999986 34578899999999999999
Q ss_pred HhCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 814 IVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 814 LTGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
++|.+||...........+..... .......++.++.+||.+||..||.+|| ++.+|++||||
T Consensus 220 ~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~ell~~~~~ 282 (282)
T cd06636 220 AEGAPPLCDMHPMRALFLIPRNPP-PKLKSKKWSKKFIDFIEGCLVKNYLSRP---STEQLLKHPFI 282 (282)
T ss_pred HhCCCCccccCHHhhhhhHhhCCC-CCCcccccCHHHHHHHHHHhCCChhhCc---CHHHHhcCCCC
Confidence 999999977665444443333221 1122346889999999999999999999 99999999998
No 180
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=7e-40 Score=338.64 Aligned_cols=255 Identities=33% Similarity=0.574 Sum_probs=219.6
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeecccc--ccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM--IRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~--~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
+|+..+.||.|+||+||+|.+..++..|++|++..... ......+.+.+|+.+++.++||||+++++++.....+|+|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 47788999999999999999988999999999875432 2234567889999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|||++|++|.+++.+.+.+++..+..++.||+.||+|||+.||+|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~----- 155 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF----- 155 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccc-----
Confidence 999999999999988888999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC-CCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG-HGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~-ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
.......|++.|+|||.+.... ++.++|+|||||++|+|++|..||......
T Consensus 156 ---------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~ 208 (258)
T cd06632 156 ---------------------------SFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV 208 (258)
T ss_pred ---------------------------ccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH
Confidence 0112356899999999998776 899999999999999999999999876655
Q ss_pred HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
.....+... ...+.++..+++.+.+||.+||+.+|.+|| ++.+++.|||+
T Consensus 209 ~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~~l~~~~~ 258 (258)
T cd06632 209 AAVFKIGRS-KELPPIPDHLSDEAKDFILKCLQRDPSLRP---TAAELLEHPFV 258 (258)
T ss_pred HHHHHHHhc-ccCCCcCCCcCHHHHHHHHHHhhcCcccCc---CHHHHhcCCCC
Confidence 544444331 234556778899999999999999999999 99999999996
No 181
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=365.37 Aligned_cols=254 Identities=32% Similarity=0.550 Sum_probs=219.4
Q ss_pred ccCCcEEE-EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeec----
Q 001783 587 SIDDFEII-KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTC---- 660 (1013)
Q Consensus 587 ~lddYeIl-k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed---- 660 (1013)
..++|.+- ++||-|-.|+|..|.++.|++.+|+|++.-. ....+|+++.-.. .|||||.++++|+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 34677775 6799999999999999999999999998643 3456788876554 69999999988875
Q ss_pred cceEEEEEEeccCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC---CCcEEEeecCC
Q 001783 661 RENLYLVMEYLNGGDLYSLLRNLGC--LDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH---DGHIKLTDFGL 735 (1013)
Q Consensus 661 ~~~LyLVMEy~~GGSL~dlL~~~g~--LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~---dG~VKLiDFGL 735 (1013)
..++.+|||.|+||+|+..|...+. |+|.++..|++||+.|+.|||+.+|.||||||+|+|+.. +..+||+|||+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 4579999999999999999987754 999999999999999999999999999999999999976 45799999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh
Q 001783 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 736 Ak~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT 815 (1013)
|+... ......+.|-||.|.|||++....|+..+|+|||||++|-||+
T Consensus 211 AK~t~--------------------------------~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLC 258 (400)
T KOG0604|consen 211 AKETQ--------------------------------EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 258 (400)
T ss_pred ccccC--------------------------------CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhc
Confidence 98410 0112346799999999999999999999999999999999999
Q ss_pred CCCCCCCCC----hhHHHHhhhccCCCCCC-CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 816 GIPPFNAEH----PQQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 816 Gk~PF~g~~----~~ei~qkIl~~~~~~p~-lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
|.+||+... ...+..+|..+.+.||. -+..+|+.++|+|++||..+|.+|+ |+++++.|||....
T Consensus 259 GyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRl---TI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 259 GYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERL---TIEEVMDHPWINQY 328 (400)
T ss_pred CCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhhe---eHHHhhcCchhccc
Confidence 999998643 34678889999988875 3457899999999999999999999 99999999999753
No 182
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.1e-40 Score=348.74 Aligned_cols=268 Identities=41% Similarity=0.801 Sum_probs=222.8
Q ss_pred CcEEEEEeeccCceEEEEEEEC---CCCCEEEEEEeeccccc-cHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKR---TTGDLFAIKVLKKADMI-RKNAVESILAERDILISV-RNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk---~tgk~VALKVlkk~~~~-~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~L 664 (1013)
+|++.+.||.|+||.||+|++. .+|+.||+|+++..... .....+.+.+|+.++..+ +|+||+++++.|+....+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4899999999999999999885 47899999999764322 223446778899999999 589999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+||||+++++|.+++...+.+++..+..++.||+.||.|||+.|++||||||+|||++.++.+||+|||++.......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~- 159 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE- 159 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccc-
Confidence 9999999999999999888889999999999999999999999999999999999999999999999999987310000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC--CCCccceeechhHHHHHHHhCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT--GHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~--~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
........|+..|+|||.+.+. .++.++|||||||++|+|++|..||..
T Consensus 160 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 210 (290)
T cd05613 160 -----------------------------VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTV 210 (290)
T ss_pred -----------------------------ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCc
Confidence 0011235789999999998753 468899999999999999999999974
Q ss_pred CC----hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCCCCCChhhHhh
Q 001783 823 EH----PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLAR 890 (1013)
Q Consensus 823 ~~----~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFFk~Idw~~L~~ 890 (1013)
.. ..++...+..... ..+..+++.+.+|+.+||..||.+||+. .++++++.||||..++|+.+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~ 281 (290)
T cd05613 211 DGEKNSQAEISRRILKSEP---PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDLAA 281 (290)
T ss_pred CCccccHHHHHHHhhccCC---CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHHhh
Confidence 33 2334444443332 3456789999999999999999999864 3899999999999999988754
No 183
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=4.8e-40 Score=346.23 Aligned_cols=257 Identities=34% Similarity=0.556 Sum_probs=214.6
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++.+.||.|+||.||+|.+..+|+.||+|++...... ......+.+|+.+++.++||||+++++++.....+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 589999999999999999999999999999999765432 2345678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 670 YLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 670 y~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
|+ |++|.+++... ..+++..++.++.||+.||+|||+.||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~----- 153 (286)
T cd07832 80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE----- 153 (286)
T ss_pred cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC-----
Confidence 99 99999998653 569999999999999999999999999999999999999999999999999987310000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
........|+..|+|||++.+. .++.++|||||||++|+|++|.+||.+.....
T Consensus 154 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~ 208 (286)
T cd07832 154 -------------------------PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE 208 (286)
T ss_pred -------------------------CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH
Confidence 0011235789999999998764 46899999999999999999999998877655
Q ss_pred HHHhhhccCC-------------------CCC--------CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 828 IFDNILNRKI-------------------PWP--------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 828 i~qkIl~~~~-------------------~~p--------~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
.+..++.... .++ ......+.++.+||++||..||.+|| +++++++||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---~~~~~l~h~~~ 285 (286)
T cd07832 209 QLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRL---SAAEALRHPYF 285 (286)
T ss_pred HHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCC---CHHHHhhCcCc
Confidence 5554433110 011 11235678999999999999999999 99999999999
Q ss_pred C
Q 001783 881 K 881 (1013)
Q Consensus 881 k 881 (1013)
.
T Consensus 286 ~ 286 (286)
T cd07832 286 T 286 (286)
T ss_pred C
Confidence 4
No 184
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=8.1e-40 Score=343.46 Aligned_cols=259 Identities=32% Similarity=0.543 Sum_probs=214.4
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc-------cHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI-------RKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~-------~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~ 662 (1013)
+|.+.+.||.|+||.||+|.+..+|+.||+|.++..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 488899999999999999999999999999988643211 1223467888999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 663 NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
.+|+||||++|++|.+++.+.+.+++..++.++.||+.||.|||++|++||||+|+||+++.++.++|+|||+++....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~- 160 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDD- 160 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccc-
Confidence 9999999999999999998888899999999999999999999999999999999999999999999999999863100
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC--CCccceeechhHHHHHHHhCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG--HGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~--ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
.. .........|+..|+|||++.+.. ++.++|+||||+++|+|++|..||
T Consensus 161 ---~~-------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~ 212 (272)
T cd06629 161 ---IY-------------------------DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPW 212 (272)
T ss_pred ---cc-------------------------cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCC
Confidence 00 000122356899999999998754 789999999999999999999999
Q ss_pred CCCChhHHHHhhhccCC--CCC-CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 821 NAEHPQQIFDNILNRKI--PWP-RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~--~~p-~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
...........+..... .++ .....++.++.+||.+||..+|.+|| +++++++||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~~~~~ 272 (272)
T cd06629 213 SDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRP---TARELLQHPFI 272 (272)
T ss_pred cCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCC---CHHHHhhCCCC
Confidence 76555444333332221 111 12235689999999999999999999 99999999997
No 185
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.6e-40 Score=351.18 Aligned_cols=259 Identities=32% Similarity=0.516 Sum_probs=215.2
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc--cHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI--RKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~--~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
+|++.+.||.|+||.||+|.+..+++.||+|.+...... .......+.+|+.+++.++|+||+++++++.+.+.+|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 488999999999999999999999999999999865433 123345677899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g-~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|||+ +|+|.+++.+.. .+++..+..++.||+.||.|||++||+|+||||+|||++.+|.++|+|||+++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~---- 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSP---- 155 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCC----
Confidence 9999 889999998765 7999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
........+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+.
T Consensus 156 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~ 208 (298)
T cd07841 156 ---------------------------NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD 208 (298)
T ss_pred ---------------------------CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc
Confidence 001122357889999999865 4578999999999999999999999987776
Q ss_pred hHHHHhhhccCCC-------------------------CCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 826 QQIFDNILNRKIP-------------------------WPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 826 ~ei~qkIl~~~~~-------------------------~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
.+.+.++...... ........+..+.+||.+||.+||.+|| ++.++++||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---s~~e~l~~~~~ 285 (298)
T cd07841 209 IDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRI---TARQALEHPYF 285 (298)
T ss_pred HHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCc---CHHHHhhCccc
Confidence 5555554321100 0011234578999999999999999999 99999999999
Q ss_pred CCC
Q 001783 881 KDI 883 (1013)
Q Consensus 881 k~I 883 (1013)
++.
T Consensus 286 ~~~ 288 (298)
T cd07841 286 SND 288 (298)
T ss_pred cCC
Confidence 863
No 186
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=8.3e-40 Score=344.78 Aligned_cols=252 Identities=20% Similarity=0.275 Sum_probs=212.5
Q ss_pred cCCcEEEEEeeccCceEEEEEEEC---CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKR---TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk---~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
.++|++.+.||+|+||.||+|.++ ..+..||+|+++... .......+.+|+.++..++||||+++++++...+.+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 357999999999999999999875 346689999987643 233456788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
|+||||+++|+|.+++... +.+++..++.++.||+.||+|||++|++||||||+|||++.++.++|+|||.+.....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~-- 159 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS-- 159 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccc--
Confidence 9999999999999999764 5789999999999999999999999999999999999999999999999998752100
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g 822 (1013)
. .........++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 160 -~---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~ 211 (266)
T cd05064 160 -E---------------------------AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWD 211 (266)
T ss_pred -c---------------------------chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCc
Confidence 0 0001112346778999999999999999999999999999875 9999998
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.+..+....+.... . +..+..++..+.+++.+||+.+|.+|| ++++|++
T Consensus 212 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~li~~c~~~~p~~RP---~~~~i~~ 260 (266)
T cd05064 212 MSGQDVIKAVEDGF-R-LPAPRNCPNLLHQLMLDCWQKERGERP---RFSQIHS 260 (266)
T ss_pred CCHHHHHHHHHCCC-C-CCCCCCCCHHHHHHHHHHcCCCchhCC---CHHHHHH
Confidence 88877777665443 2 234677899999999999999999999 8888765
No 187
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.4e-40 Score=349.40 Aligned_cols=255 Identities=30% Similarity=0.527 Sum_probs=217.5
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.++|++++.||+|+||+||++.+..+++.||+|++.... .......+.+|+++++.++||||+++++.+.....+|+|
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence 467999999999999999999999999999999986542 234457888999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|||+++++|..++.+.+.+++..++.++.|++.||.|||+ .||+||||||+||+++.++.++|+|||++....
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~------ 155 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI------ 155 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchh------
Confidence 9999999999999888889999999999999999999997 699999999999999999999999999876210
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
.......+||..|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 156 ---------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~ 208 (284)
T cd06620 156 ---------------------------NSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNID 208 (284)
T ss_pred ---------------------------hhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchh
Confidence 00112357999999999998888999999999999999999999999865432
Q ss_pred -----------HHHHhhhccCCCCCCCCC-CCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 827 -----------QIFDNILNRKIPWPRVPE-EMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 827 -----------ei~qkIl~~~~~~p~lp~-~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
+....+..... +.++. .++.++.+||.+||+.||.+|| ++.++++|+||..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rp---t~~e~~~~~~~~~ 271 (284)
T cd06620 209 DDGQDDPMGILDLLQQIVQEPP--PRLPSSDFPEDLRDFVDACLLKDPTERP---TPQQLCAMPPFIQ 271 (284)
T ss_pred hhhhhhhhHHHHHHHHHhhccC--CCCCchhcCHHHHHHHHHHhcCCcccCc---CHHHHhcCccccc
Confidence 23333333221 22222 3788999999999999999999 9999999999964
No 188
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.3e-39 Score=340.43 Aligned_cols=255 Identities=29% Similarity=0.474 Sum_probs=214.6
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
+++|++.+.||.|+||.||+|+++.+++.||||.+.............+.+|+.+++.++||||+++++.+.+.+..|+|
T Consensus 1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence 36899999999999999999999999999999998765555556667889999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 668 MEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~-- 158 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-- 158 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccc--
Confidence 999999999988853 24589999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
.........|++.|+|||.+.+..++.++|+||||+++|||++|..||...
T Consensus 159 -----------------------------~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~ 209 (267)
T cd08228 159 -----------------------------KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred -----------------------------hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc
Confidence 001112357899999999999988999999999999999999999999754
Q ss_pred C--hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 824 H--PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 824 ~--~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
. .......+..... .+..+...+..+.+||.+||+.+|.+|| ++.++++.
T Consensus 210 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~~vl~~ 261 (267)
T cd08228 210 KMNLFSLCQKIEQCDY-PPLPTEHYSEKLRELVSMCIYPDPDQRP---DIGYVHQI 261 (267)
T ss_pred cccHHHHHHHHhcCCC-CCCChhhcCHHHHHHHHHHCCCCcccCc---CHHHHHHH
Confidence 3 2344444433222 1222346788999999999999999999 89998874
No 189
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.7e-40 Score=347.98 Aligned_cols=257 Identities=29% Similarity=0.562 Sum_probs=207.1
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
.+++|++.+.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+.+++.++||||+++++++.+.++.|+
T Consensus 3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 80 (291)
T cd07844 3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--EGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTL 80 (291)
T ss_pred CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--cCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEE
Confidence 35789999999999999999999999999999999875432 1122346789999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 667 VMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
||||+.+ +|.+++.+. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 v~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 156 (291)
T cd07844 81 VFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVP--- 156 (291)
T ss_pred EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCC---
Confidence 9999985 999988764 46899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
........+++.|+|||++.+ ..++.++|||||||++|+|++|.+||....
T Consensus 157 ----------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~ 208 (291)
T cd07844 157 ----------------------------SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGST 208 (291)
T ss_pred ----------------------------CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 000112357889999999876 458899999999999999999999997654
Q ss_pred -hhHHHHhhhccC-------------------CCCC--------CCCCCCC--HHHHHHHHHhccCCcCCcCCCCCHHHH
Q 001783 825 -PQQIFDNILNRK-------------------IPWP--------RVPEEMS--PEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1013)
Q Consensus 825 -~~ei~qkIl~~~-------------------~~~p--------~lp~~lS--~elkDLI~rMLqkDPekRPg~~TAeEL 874 (1013)
..+....+.... ..++ .....++ .++.++|.+||+.||.+|| ++.++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rp---s~~e~ 285 (291)
T cd07844 209 DVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRI---SAAEA 285 (291)
T ss_pred cHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCccccc---CHHHH
Confidence 222222221100 0000 0011344 7899999999999999999 99999
Q ss_pred HhCCCC
Q 001783 875 KQHVFF 880 (1013)
Q Consensus 875 LqHPFF 880 (1013)
++||||
T Consensus 286 l~~~~f 291 (291)
T cd07844 286 MKHPYF 291 (291)
T ss_pred hcCCCC
Confidence 999998
No 190
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.6e-39 Score=342.40 Aligned_cols=258 Identities=32% Similarity=0.543 Sum_probs=208.3
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHH-HHhcCCCCeeEEEeeeeccceEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDI-LISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~I-L~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
++|++++.||+|+||.||+|+++.+|+.||+|+++..... .. ...+..|..+ ++.++||||+++++++.....+|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS-QE-QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc-HH-HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 4799999999999999999999999999999998764321 22 2345556654 5667899999999999999999999
Q ss_pred EEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 668 MEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSL-RVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLHs~-GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
|||++ |+|.+++.. ...+++..+..++.||+.||+|||++ +++||||||+|||++.++.+||+|||++.....
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~- 156 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD- 156 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccc-
Confidence 99997 588877754 24689999999999999999999997 999999999999999999999999999873100
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc----CCCCccceeechhHHHHHHHhCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG----TGHGTTADWWSVGIILFELIVGIP 818 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g----~~ys~ksDIWSLGVILYELLTGk~ 818 (1013)
........|+..|+|||++.+ ..++.++|+|||||++|+|++|..
T Consensus 157 -------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 205 (283)
T cd06617 157 -------------------------------SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRF 205 (283)
T ss_pred -------------------------------ccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCC
Confidence 001122468899999999865 457889999999999999999999
Q ss_pred CCCCC-ChhHHHHhhhccCCCCCCCC-CCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChh
Q 001783 819 PFNAE-HPQQIFDNILNRKIPWPRVP-EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWD 886 (1013)
Q Consensus 819 PF~g~-~~~ei~qkIl~~~~~~p~lp-~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~ 886 (1013)
||... ...+....+..... +.++ ..++.++.+||.+||..+|.+|| ++.++++||||....+.
T Consensus 206 p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rp---~~~~il~~~~~~~~~~~ 270 (283)
T cd06617 206 PYDSWKTPFQQLKQVVEEPS--PQLPAEKFSPEFQDFVNKCLKKNYKERP---NYPELLQHPFFELHLSK 270 (283)
T ss_pred CCCccccCHHHHHHHHhcCC--CCCCccccCHHHHHHHHHHccCChhhCc---CHHHHhcCchhhhcccc
Confidence 99643 22233333333221 2222 35789999999999999999999 99999999999986655
No 191
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.2e-39 Score=349.81 Aligned_cols=255 Identities=24% Similarity=0.375 Sum_probs=206.4
Q ss_pred cCCcEEEEEeeccCceEEEEEEECC----------------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCe
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRT----------------TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFV 651 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~----------------tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNI 651 (1013)
.++|++.++||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.+|..++||||
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCe
Confidence 3679999999999999999998632 34479999987542 23445678999999999999999
Q ss_pred eEEEeeeeccceEEEEEEeccCCChHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHHhCCeee
Q 001783 652 VRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG-------------------CLDEDVARVYIAEVVLALEYLHSLRVVH 712 (1013)
Q Consensus 652 VkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g-------------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIH 712 (1013)
+++++++.+.+.+|+||||+.+|+|.+++.... .++...+..++.||+.||.|||++||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999999999999999999986531 3677888999999999999999999999
Q ss_pred cccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhh
Q 001783 713 RDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEIL 792 (1013)
Q Consensus 713 RDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL 792 (1013)
|||||+|||++.++.+||+|||+++...... .........++..|||||++
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~ 212 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGD-----------------------------YYRIQGRAVLPIRWMAWECI 212 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCc-----------------------------eeEecCcCCCCccccCHHHH
Confidence 9999999999999999999999987310000 00011234568899999999
Q ss_pred ccCCCCccceeechhHHHHHHHh--CCCCCCCCChhHHHHhhhcc-----CCCCCCCCCCCCHHHHHHHHHhccCCcCCc
Q 001783 793 LGTGHGTTADWWSVGIILFELIV--GIPPFNAEHPQQIFDNILNR-----KIPWPRVPEEMSPEAHDLIDRFLTEDPHQR 865 (1013)
Q Consensus 793 ~g~~ys~ksDIWSLGVILYELLT--Gk~PF~g~~~~ei~qkIl~~-----~~~~p~lp~~lS~elkDLI~rMLqkDPekR 865 (1013)
.+..++.++|||||||++|||++ +..||...+..+....+... ...++..+..++..+.+||.+||..||.+|
T Consensus 213 ~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 292 (304)
T cd05096 213 LMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRER 292 (304)
T ss_pred hcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhC
Confidence 98889999999999999999986 66888877666655444221 111223355688999999999999999999
Q ss_pred CCCCCHHHHHh
Q 001783 866 LGSGGASEVKQ 876 (1013)
Q Consensus 866 Pg~~TAeELLq 876 (1013)
| ++.+|.+
T Consensus 293 P---s~~~i~~ 300 (304)
T cd05096 293 P---SFSDIHA 300 (304)
T ss_pred c---CHHHHHH
Confidence 9 8888854
No 192
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=8.7e-40 Score=346.46 Aligned_cols=248 Identities=31% Similarity=0.552 Sum_probs=203.3
Q ss_pred CCcEEEEEe--eccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCCeeEEEeeeeccceEE
Q 001783 589 DDFEIIKPI--SRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 589 ddYeIlk~L--GkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~-L~HPNIVkL~e~fed~~~Ly 665 (1013)
++|++.+.+ |.|+||.||+++++.++..||+|++........ |..+... .+||||+++++.|...+.+|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--------e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI--------EPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh--------hHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 456776666 999999999999999999999999876432111 2222221 27999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC-cEEEeecCCccccccCCC
Q 001783 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-HIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG-~VKLiDFGLAk~~~~~s~ 744 (1013)
+||||++|++|.+++.+.+.+++..+..++.||+.||.|||+.||+||||||+||+++.++ .++|+|||+++...
T Consensus 86 iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~---- 161 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG---- 161 (267)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecC----
Confidence 9999999999999998877899999999999999999999999999999999999999988 99999999886310
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
......||+.|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 162 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~ 210 (267)
T PHA03390 162 -------------------------------TPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDE 210 (267)
T ss_pred -------------------------------CCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 0112468899999999999899999999999999999999999998654
Q ss_pred hhHH-HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCC-HHHHHhCCCCCC
Q 001783 825 PQQI-FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGG-ASEVKQHVFFKD 882 (1013)
Q Consensus 825 ~~ei-~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~T-AeELLqHPFFk~ 882 (1013)
.... ...+..........+..+++.+.+||.+||+.||.+|+ + ++++|+||||++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---~~~~~~l~h~~~~~ 267 (267)
T PHA03390 211 DEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRL---TNYNEIIKHPFLKI 267 (267)
T ss_pred cchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCC---chHHHHhcCCcccC
Confidence 3322 11111111112234457899999999999999999999 5 599999999974
No 193
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=8.8e-40 Score=344.61 Aligned_cols=258 Identities=32% Similarity=0.550 Sum_probs=214.3
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++.+.||.|+||.||+|.++.+++.||+|+++.... .......+.+|+.+++.++|+||+++++.+...+.+|+||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 369999999999999999999999999999999875432 2334577889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||++++.|..++.+...+++..+..++.||+.||.|||++||+||||+|+||+++.++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~----- 154 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARP----- 154 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCc-----
Confidence 999987777777666779999999999999999999999999999999999999999999999999987411000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
........|+..|+|||++.+. .++.++|+||||+++|+|++|.+||.+....+
T Consensus 155 -------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~ 209 (288)
T cd07833 155 -------------------------ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID 209 (288)
T ss_pred -------------------------cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0012235788999999999887 88999999999999999999999998765544
Q ss_pred HHHhhhccCC-------------------CCC----------CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCC
Q 001783 828 IFDNILNRKI-------------------PWP----------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHV 878 (1013)
Q Consensus 828 i~qkIl~~~~-------------------~~p----------~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHP 878 (1013)
....+..... .++ ..+..++.++.+||++||..+|.+|| +++++++||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~~~ 286 (288)
T cd07833 210 QLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERL---TCDELLQHP 286 (288)
T ss_pred HHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcc---cHHHHhcCC
Confidence 3332221000 000 12234588999999999999999999 999999999
Q ss_pred CC
Q 001783 879 FF 880 (1013)
Q Consensus 879 FF 880 (1013)
||
T Consensus 287 ~f 288 (288)
T cd07833 287 YF 288 (288)
T ss_pred CC
Confidence 98
No 194
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.4e-39 Score=336.43 Aligned_cols=258 Identities=37% Similarity=0.632 Sum_probs=216.6
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++.+.||+|+||.||+|.+..+++.||+|+++..... ......+.+|+.+++.++|+||+++++.+...+.+++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 489999999999999999999999999999999866433 4567889999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
|+++++|.+++.+.+.+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~---- 155 (264)
T cd06626 80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT---- 155 (264)
T ss_pred cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc----
Confidence 9999999999988777999999999999999999999999999999999999999999999999998741110000
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC---CCccceeechhHHHHHHHhCCCCCCCCC-h
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG---HGTTADWWSVGIILFELIVGIPPFNAEH-P 825 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~---ys~ksDIWSLGVILYELLTGk~PF~g~~-~ 825 (1013)
.........|++.|+|||++.+.. ++.++||||||+++|+|++|..||.... .
T Consensus 156 -----------------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~ 212 (264)
T cd06626 156 -----------------------MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE 212 (264)
T ss_pred -----------------------ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch
Confidence 000012356889999999998766 8899999999999999999999997653 3
Q ss_pred hHHHHhhhccCCCCCCCCC--CCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 826 QQIFDNILNRKIPWPRVPE--EMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~--~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
......+... ..+.+|. .+++.+.+||.+||+.+|.+|| ++.+++.|||+
T Consensus 213 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---~~~~i~~~~~~ 264 (264)
T cd06626 213 FQIMFHVGAG--HKPPIPDSLQLSPEGKDFLDRCLESDPKKRP---TASELLQHPFV 264 (264)
T ss_pred HHHHHHHhcC--CCCCCCcccccCHHHHHHHHHHccCCcccCC---CHHHHhcCCCC
Confidence 3333233322 1223333 3489999999999999999999 99999999996
No 195
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=7e-40 Score=346.67 Aligned_cols=258 Identities=33% Similarity=0.569 Sum_probs=222.4
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
..|+.++.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.++||||+++++.+.+....|+||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 458889999999999999999999999999999875432 344578889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||++||+|.+++.. +.+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~------ 154 (277)
T cd06640 82 EYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT------ 154 (277)
T ss_pred ecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCC------
Confidence 99999999999875 57899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
........|+..|+|||++.+..++.++|+|||||++|||++|.+||........
T Consensus 155 -------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~ 209 (277)
T cd06640 155 -------------------------QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV 209 (277)
T ss_pred -------------------------ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH
Confidence 0011234688899999999988899999999999999999999999988776665
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCCh
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINW 885 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw 885 (1013)
...+.... .+.++..++..+.+||.+||+.+|.+|| ++.++++||||.....
T Consensus 210 ~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~~~~~ 261 (277)
T cd06640 210 LFLIPKNN--PPTLTGEFSKPFKEFIDACLNKDPSFRP---TAKELLKHKFIVKNAK 261 (277)
T ss_pred hhhhhcCC--CCCCchhhhHHHHHHHHHHcccCcccCc---CHHHHHhChHhhhcch
Confidence 55543332 2445667889999999999999999999 9999999999987654
No 196
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=8.8e-40 Score=360.14 Aligned_cols=255 Identities=28% Similarity=0.466 Sum_probs=210.0
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc------
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------ 661 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~------ 661 (1013)
.++|++++.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+++.++||||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4779999999999999999999999999999999875432 233445677899999999999999999988654
Q ss_pred ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
.++|+||||+.+ +|.+.+... +++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 357999999965 888888654 89999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus 171 --------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~ 218 (353)
T cd07850 171 --------------------------------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFP 218 (353)
T ss_pred --------------------------------CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCC
Confidence 000123468899999999999999999999999999999999999998
Q ss_pred CCChhHHHHhhhccCCC---------------------------CCCC-------------CCCCCHHHHHHHHHhccCC
Q 001783 822 AEHPQQIFDNILNRKIP---------------------------WPRV-------------PEEMSPEAHDLIDRFLTED 861 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~~---------------------------~p~l-------------p~~lS~elkDLI~rMLqkD 861 (1013)
..+....+..+...... +... +...+..+.+||.+||+.|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 298 (353)
T cd07850 219 GTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVID 298 (353)
T ss_pred CCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCC
Confidence 77655544444321000 0000 1124667899999999999
Q ss_pred cCCcCCCCCHHHHHhCCCCC
Q 001783 862 PHQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 862 PekRPg~~TAeELLqHPFFk 881 (1013)
|.+|| ++.++|+||||+
T Consensus 299 P~~R~---t~~eiL~~~~~~ 315 (353)
T cd07850 299 PEKRI---SVDDALQHPYIN 315 (353)
T ss_pred hhhCc---CHHHHhcChhHh
Confidence 99999 999999999997
No 197
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=5.4e-40 Score=352.80 Aligned_cols=249 Identities=25% Similarity=0.463 Sum_probs=191.6
Q ss_pred EEeeccCceEEEEEEECC--CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec--cceEEEEEEe
Q 001783 595 KPISRGAFGRVFLAKKRT--TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC--RENLYLVMEY 670 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~--tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed--~~~LyLVMEy 670 (1013)
.+||+|+||+||+|+++. ++..||+|.+..... ...+.+|+.+|+.++||||+++++++.. ...+|+||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 579999999999999754 568999999875432 2356789999999999999999998854 5678999999
Q ss_pred ccCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceee----cCCCcEEEeecCCcc
Q 001783 671 LNGGDLYSLLRNL---------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLI----AHDGHIKLTDFGLSK 737 (1013)
Q Consensus 671 ~~GGSL~dlL~~~---------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILL----d~dG~VKLiDFGLAk 737 (1013)
+.+ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 82 AEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred eCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 965 888877421 248899999999999999999999999999999999999 456799999999997
Q ss_pred ccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhC
Q 001783 738 VGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVG 816 (1013)
Q Consensus 738 ~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG 816 (1013)
..... . .........+||+.|+|||++.+ ..++.++|||||||++|||+||
T Consensus 161 ~~~~~-~---------------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg 212 (317)
T cd07867 161 LFNSP-L---------------------------KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 212 (317)
T ss_pred ccCCC-c---------------------------ccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhC
Confidence 41000 0 00011234578999999999987 4579999999999999999999
Q ss_pred CCCCCCCChh---------HHHHhhhcc--------------CCCC---------------------CCCCCCCCHHHHH
Q 001783 817 IPPFNAEHPQ---------QIFDNILNR--------------KIPW---------------------PRVPEEMSPEAHD 852 (1013)
Q Consensus 817 k~PF~g~~~~---------ei~qkIl~~--------------~~~~---------------------p~lp~~lS~elkD 852 (1013)
.+||...... .....+... ...+ .......+..+.+
T Consensus 213 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (317)
T cd07867 213 EPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFL 292 (317)
T ss_pred CCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHH
Confidence 9999754321 011111100 0000 0011124567889
Q ss_pred HHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 853 LIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 853 LI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
||.+||+.||.+|| |++|+|+||||
T Consensus 293 ll~~~l~~dP~~R~---t~~e~l~hp~f 317 (317)
T cd07867 293 LLQKLLTMDPTKRI---TSEQALQDPYF 317 (317)
T ss_pred HHHHHhccCccccc---CHHHHhcCCCC
Confidence 99999999999999 99999999998
No 198
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=7.4e-40 Score=345.81 Aligned_cols=255 Identities=31% Similarity=0.539 Sum_probs=209.8
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++++.||.|+||.||+|+++.+++.||||++..... .......+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 48999999999999999999999999999999875432 22233578899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 670 y~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|+. ++|..++... +.+++..+..++.||+.||+|||++|++||||+|+||+++.++.+||+|||++......
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~----- 153 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP----- 153 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccC-----
Confidence 996 5899888653 56899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC-CCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG-HGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~-ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
........+++.|+|||++.+.. ++.++|||||||++|+|+||+.||...+..
T Consensus 154 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~ 207 (284)
T cd07860 154 --------------------------VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 207 (284)
T ss_pred --------------------------ccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 00112335788999999987644 588999999999999999999999877655
Q ss_pred HHHHhhhccCC------------------CCC--------CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 827 QIFDNILNRKI------------------PWP--------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 827 ei~qkIl~~~~------------------~~p--------~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
+...++..... .++ .....++.++.+||.+||+.||.+|| +++++++||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~~l~~~~f 284 (284)
T cd07860 208 DQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRI---SAKAALAHPFF 284 (284)
T ss_pred HHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCC---CHHHHhcCCCC
Confidence 44433332110 001 11234788999999999999999999 99999999998
No 199
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.5e-39 Score=331.26 Aligned_cols=254 Identities=33% Similarity=0.651 Sum_probs=223.6
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++.+.||.|+||.||+|.+..+++.||+|++..... .......+.+|+++++.++|||++++++.+......++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 58999999999999999999999999999999876543 23445678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 670 YLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 670 y~~GGSL~dlL~~~----g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
|+++++|.+++.+. ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~--- 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST--- 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccC---
Confidence 99999999999764 67999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||.....
T Consensus 157 ----------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~ 208 (258)
T cd08215 157 ----------------------------VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL 208 (258)
T ss_pred ----------------------------cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH
Confidence 0012235789999999999988899999999999999999999999988887
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
.+....+.... .+.++..++..+.++|.+||..+|.+|| ++.++++||||
T Consensus 209 ~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~ll~~~~~ 258 (258)
T cd08215 209 LELALKILKGQ--YPPIPSQYSSELRNLVSSLLQKDPEERP---SIAQILQSPFI 258 (258)
T ss_pred HHHHHHHhcCC--CCCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHhcCCCC
Confidence 77777776544 3456678899999999999999999999 99999999998
No 200
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.1e-39 Score=350.87 Aligned_cols=261 Identities=31% Similarity=0.499 Sum_probs=214.2
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--ceE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENL 664 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~--~~L 664 (1013)
.+++|++.+.||.|+||.||+|.++.+|+.||+|+++..... ......+.+|+.+++.++|+||+++++++... +.+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER-DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC-CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 468899999999999999999999999999999998754321 12223456899999999999999999998765 568
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
|+||||+.+ +|.+++... ..+++..+..++.||+.||+|||+.|++||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~- 161 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP- 161 (309)
T ss_pred EEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc-
Confidence 999999975 888888653 67899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
........+++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+
T Consensus 162 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~ 211 (309)
T cd07845 162 ------------------------------AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPG 211 (309)
T ss_pred ------------------------------cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 001112356888999999876 5579999999999999999999999998
Q ss_pred CChhHHHHhhhccCC-------------------CCCCC--------CCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHH
Q 001783 823 EHPQQIFDNILNRKI-------------------PWPRV--------PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~-------------------~~p~l--------p~~lS~elkDLI~rMLqkDPekRPg~~TAeELL 875 (1013)
.+..+.+..+..... ..+.. ....++++.+||.+||+.||.+|| ++++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~---t~~~il 288 (309)
T cd07845 212 KSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRA---TAEEAL 288 (309)
T ss_pred CCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCc---CHHHHh
Confidence 888777766654211 00000 123588999999999999999999 999999
Q ss_pred hCCCCCCC
Q 001783 876 QHVFFKDI 883 (1013)
Q Consensus 876 qHPFFk~I 883 (1013)
+||||+..
T Consensus 289 ~h~~f~~~ 296 (309)
T cd07845 289 ESSYFKEK 296 (309)
T ss_pred cChhhccC
Confidence 99999853
No 201
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.4e-39 Score=338.69 Aligned_cols=254 Identities=31% Similarity=0.473 Sum_probs=207.9
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
+.+.....||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.++|+||+++++++...+..|+||
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 33444568999999999999999999999999887543 234567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC-CCcEEEeecCCccccccCCC
Q 001783 669 EYLNGGDLYSLLRNL-GCL--DEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~-g~L--sE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~~~~~s~ 744 (1013)
||+++++|.+++... +.+ ++..+..++.||+.||+|||++||+||||||+||+++. ++.++|+|||++......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-- 162 (268)
T cd06624 85 EQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI-- 162 (268)
T ss_pred ecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC--
Confidence 999999999999764 455 88899999999999999999999999999999999976 679999999988631000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC--CCCccceeechhHHHHHHHhCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT--GHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~--~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
........|++.|+|||++.+. .++.++|+||||+++|+|++|.+||..
T Consensus 163 -----------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 163 -----------------------------NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred -----------------------------CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 0011124588999999998764 378999999999999999999999975
Q ss_pred CChhH-HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 823 EHPQQ-IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 823 ~~~~e-i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
..... ....+. .....+.++..+++++.+||.+||+.+|.+|| ++.+++.||||
T Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~ll~~~~~ 268 (268)
T cd06624 214 LGEPQAAMFKVG-MFKIHPEIPESLSAEAKNFILRCFEPDPDKRA---SAHDLLQDPFL 268 (268)
T ss_pred ccChhhhHhhhh-hhccCCCCCcccCHHHHHHHHHHcCCCchhCC---CHHHHHhCCCC
Confidence 43221 111111 11122456677899999999999999999999 99999999997
No 202
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.9e-39 Score=344.97 Aligned_cols=256 Identities=31% Similarity=0.561 Sum_probs=220.0
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
.|...+.||.|++|.||++.+..+++.+|+|++.... ....+.+.+|+.+++.++||||+++++++...++.|+|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK---QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 4666789999999999999999999999999886432 2334568899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
|+.|++|.+++.. +.+++..+..++.||+.||+|||++||+||||+|+||+++.++.++|+|||++......
T Consensus 97 ~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~------- 168 (285)
T cd06648 97 FLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE------- 168 (285)
T ss_pred ccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC-------
Confidence 9999999999987 67999999999999999999999999999999999999999999999999987631000
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHH
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIF 829 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~ 829 (1013)
........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+.....
T Consensus 169 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~ 224 (285)
T cd06648 169 ------------------------VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAM 224 (285)
T ss_pred ------------------------CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHH
Confidence 00112356899999999999888999999999999999999999999988877777
Q ss_pred HhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 830 DNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 830 qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
..+.....+....+..++..+.+||.+||+.+|.+|| ++.++++||||+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~il~~~~~~~~ 275 (285)
T cd06648 225 KRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRA---TAAELLNHPFLAKA 275 (285)
T ss_pred HHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCc---CHHHHccCcccccC
Confidence 7766554333333345789999999999999999999 99999999999864
No 203
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.1e-39 Score=343.29 Aligned_cols=253 Identities=26% Similarity=0.445 Sum_probs=214.8
Q ss_pred cCCcEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~-----tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~ 662 (1013)
.++|.+.+.||+|+||.||+|.+.. +++.||+|+++... ..+....+.+|+++|..++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 4679999999999999999998753 46789999987543 2334578899999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcE
Q 001783 663 NLYLVMEYLNGGDLYSLLRNLG--------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHI 728 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~g--------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~V 728 (1013)
..|+||||++|++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeE
Confidence 9999999999999999997542 37889999999999999999999999999999999999999999
Q ss_pred EEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhH
Q 001783 729 KLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGI 808 (1013)
Q Consensus 729 KLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGV 808 (1013)
||+|||+++....... ........+++.|+|||++.+..++.++|||||||
T Consensus 162 kl~d~g~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 212 (280)
T cd05049 162 KIGDFGMSRDVYTTDY-----------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV 212 (280)
T ss_pred EECCcccceecccCcc-----------------------------eecCCCCcccceecChhhhccCCcchhhhHHHHHH
Confidence 9999999873110000 00112335678999999999999999999999999
Q ss_pred HHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 809 ILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 809 ILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
++|||++ |..||...+..+....+..... +..+..++..+.+||.+||+.||.+|| ++.|+++
T Consensus 213 il~e~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~eil~ 276 (280)
T cd05049 213 VLWEIFTYGKQPWYGLSNEEVIECITQGRL--LQRPRTCPSEVYDIMLGCWKRDPQQRI---NIKDIHE 276 (280)
T ss_pred HHHHHHhcCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCCcccCC---CHHHHHH
Confidence 9999998 9999988888887777765443 334567899999999999999999999 8998875
No 204
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.5e-39 Score=348.89 Aligned_cols=253 Identities=25% Similarity=0.401 Sum_probs=211.4
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCE--EEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccc
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDL--FAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRE 662 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~--VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~ 662 (1013)
..+++|++.+.||+|+||.||+|.++.++.. +|+|.++.. ........+.+|+.++.++ +||||+++++++...+
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 81 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence 4568899999999999999999999887765 466665432 2344556788999999999 8999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC
Q 001783 663 NLYLVMEYLNGGDLYSLLRNLG----------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG 726 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~g----------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG 726 (1013)
.+|+||||+++|+|.+++.+.+ .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 161 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence 9999999999999999997542 478999999999999999999999999999999999999999
Q ss_pred cEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeech
Q 001783 727 HIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSV 806 (1013)
Q Consensus 727 ~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSL 806 (1013)
.+||+|||+++.... ........++..|+|||++.+..++.++|||||
T Consensus 162 ~~kl~dfg~~~~~~~--------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 209 (303)
T cd05088 162 VAKIADFGLSRGQEV--------------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 209 (303)
T ss_pred cEEeCccccCcccch--------------------------------hhhcccCCCcccccCHHHHhccCCcccccchhh
Confidence 999999999862000 000111234678999999988889999999999
Q ss_pred hHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 807 GIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 807 GVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
||++|||+| |.+||...+..+.+..+.... .+..+..++.++.+||.+||+.+|.+|| ++++++++
T Consensus 210 G~il~ellt~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~ 276 (303)
T cd05088 210 GVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--RLEKPLNCDDEVYDLMRQCWREKPYERP---SFAQILVS 276 (303)
T ss_pred hhHHHHHHhcCCCCcccCChHHHHHHHhcCC--cCCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 999999998 999998887777776664332 1234556889999999999999999999 89999886
No 205
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-39 Score=376.17 Aligned_cols=252 Identities=24% Similarity=0.322 Sum_probs=204.0
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
..|.+.+.||+|+||.||+|.+..+++.||||.... ..+.+|+++|++++|||||++++++...+..|+||
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 469999999999999999999999999999996432 23568999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|++. ++|..++... +.+++..++.++.||+.||.|||++|||||||||+||||+.++.+||+|||+++......
T Consensus 240 e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~---- 314 (461)
T PHA03211 240 PKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSW---- 314 (461)
T ss_pred EccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccccc----
Confidence 9995 6898888654 569999999999999999999999999999999999999999999999999987411000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC----
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE---- 823 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~---- 823 (1013)
........+||+.|||||++.+..++.++|||||||+||||++|..|+...
T Consensus 315 -------------------------~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~ 369 (461)
T PHA03211 315 -------------------------STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGD 369 (461)
T ss_pred -------------------------ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCccc
Confidence 000112457999999999999999999999999999999999987654321
Q ss_pred ----ChhHHHHhhhccCCC---CCCC----------------------------CCCCCHHHHHHHHHhccCCcCCcCCC
Q 001783 824 ----HPQQIFDNILNRKIP---WPRV----------------------------PEEMSPEAHDLIDRFLTEDPHQRLGS 868 (1013)
Q Consensus 824 ----~~~ei~qkIl~~~~~---~p~l----------------------------p~~lS~elkDLI~rMLqkDPekRPg~ 868 (1013)
...++.+.+...... ++.. ...++.++.+||.+||+.||.+||
T Consensus 370 ~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RP-- 447 (461)
T PHA03211 370 ERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRP-- 447 (461)
T ss_pred ccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCc--
Confidence 112222222221111 1100 013566899999999999999999
Q ss_pred CCHHHHHhCCCCCC
Q 001783 869 GGASEVKQHVFFKD 882 (1013)
Q Consensus 869 ~TAeELLqHPFFk~ 882 (1013)
++.|+|+||||+.
T Consensus 448 -sa~elL~hp~f~~ 460 (461)
T PHA03211 448 -SAAELLRLPLFQS 460 (461)
T ss_pred -CHHHHhhCcccCC
Confidence 9999999999974
No 206
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=8.5e-40 Score=365.96 Aligned_cols=258 Identities=25% Similarity=0.363 Sum_probs=210.7
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEECCC-----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEee
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTT-----GDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYS 657 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArdk~t-----gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~ 657 (1013)
+....++|++.+.||+|+||.||+|++..+ +..||+|+++.... ......+.+|+.+++.+ +||||++++++
T Consensus 33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~~ 110 (374)
T cd05106 33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLGA 110 (374)
T ss_pred ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEeeE
Confidence 455567899999999999999999986543 35799999976432 33456788999999999 89999999999
Q ss_pred eeccceEEEEEEeccCCChHHHHHhc------------------------------------------------------
Q 001783 658 FTCRENLYLVMEYLNGGDLYSLLRNL------------------------------------------------------ 683 (1013)
Q Consensus 658 fed~~~LyLVMEy~~GGSL~dlL~~~------------------------------------------------------ 683 (1013)
+.....+|+|||||++|+|.+++...
T Consensus 111 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 111 CTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred ecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 99999999999999999999998542
Q ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 684 ----------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 684 ----------------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~--- 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN--- 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc---
Confidence 1367888999999999999999999999999999999999999999999999873110000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChh
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQ 826 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~~ 826 (1013)
........+++.|||||++.+..++.++|||||||++|||++ |+.||......
T Consensus 268 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~ 321 (374)
T cd05106 268 --------------------------YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN 321 (374)
T ss_pred --------------------------eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc
Confidence 001112345678999999999899999999999999999997 99999876655
Q ss_pred HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
..+..+...... +..+...++++.+||.+||+.||.+|| ++.++++
T Consensus 322 ~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~RP---s~~~l~~ 367 (374)
T cd05106 322 SKFYKMVKRGYQ-MSRPDFAPPEIYSIMKMCWNLEPTERP---TFSQISQ 367 (374)
T ss_pred HHHHHHHHcccC-ccCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 444444443332 234556789999999999999999999 8888875
No 207
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.4e-39 Score=345.48 Aligned_cols=257 Identities=31% Similarity=0.513 Sum_probs=208.4
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccce----
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCREN---- 663 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~---- 663 (1013)
++|++.+.||.|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.+. ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 469999999999999999999999999999999865421 2223356788999999995 6999999999887665
Q ss_pred -EEEEEEeccCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC-CCcEEEeecCCc
Q 001783 664 -LYLVMEYLNGGDLYSLLRNL-----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLS 736 (1013)
Q Consensus 664 -LyLVMEy~~GGSL~dlL~~~-----g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDFGLA 736 (1013)
.|+||||+++ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999986 898888543 35799999999999999999999999999999999999998 889999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHh
Q 001783 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 737 k~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLT 815 (1013)
+..... ........+++.|+|||++.+ ..++.++|||||||++|+|++
T Consensus 159 ~~~~~~-------------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~ 207 (295)
T cd07837 159 RAFSIP-------------------------------VKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSR 207 (295)
T ss_pred eecCCC-------------------------------ccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHc
Confidence 731000 001122357889999999875 457899999999999999999
Q ss_pred CCCCCCCCChhHHHHhhhccCC-----C------------CC--------CCCCCCCHHHHHHHHHhccCCcCCcCCCCC
Q 001783 816 GIPPFNAEHPQQIFDNILNRKI-----P------------WP--------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGG 870 (1013)
Q Consensus 816 Gk~PF~g~~~~ei~qkIl~~~~-----~------------~p--------~lp~~lS~elkDLI~rMLqkDPekRPg~~T 870 (1013)
|.+||.+.+.......+..... . ++ ...+.++.++.+||.+||..||.+|| +
T Consensus 208 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~---~ 284 (295)
T cd07837 208 KQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRI---S 284 (295)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcC---C
Confidence 9999988766555444432100 0 00 01135789999999999999999999 9
Q ss_pred HHHHHhCCCCC
Q 001783 871 ASEVKQHVFFK 881 (1013)
Q Consensus 871 AeELLqHPFFk 881 (1013)
+.+++.||||+
T Consensus 285 ~~eil~~~~~~ 295 (295)
T cd07837 285 AKAALTHPYFD 295 (295)
T ss_pred HHHHhcCCCcC
Confidence 99999999995
No 208
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=6.5e-39 Score=328.10 Aligned_cols=257 Identities=36% Similarity=0.595 Sum_probs=220.4
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--ceEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENLYLV 667 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~--~~LyLV 667 (1013)
+|++.+.||.|++|.||+|.+..+++.|++|++...... ....+.+.+|+.++++++||||+++++.+... ..+|+|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 488899999999999999999999999999998765432 44568889999999999999999999999988 899999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|||+++++|.+++.+...+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+........
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 156 (260)
T cd06606 80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET--- 156 (260)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccc---
Confidence 99999999999998877899999999999999999999999999999999999999999999999999874211000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC-hh
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH-PQ 826 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~-~~ 826 (1013)
........++..|+|||.+.+..++.++|+||||+++|+|++|..||.... ..
T Consensus 157 --------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 210 (260)
T cd06606 157 --------------------------GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM 210 (260)
T ss_pred --------------------------cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH
Confidence 001223578899999999998889999999999999999999999998765 22
Q ss_pred HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
.....+.. ....+.++..++..+.+||.+||+.||.+|| ++.++++||||
T Consensus 211 ~~~~~~~~-~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp---~~~~ll~~~~~ 260 (260)
T cd06606 211 AALYKIGS-SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRP---TADELLQHPFL 260 (260)
T ss_pred HHHHhccc-cCCCcCCCcccCHHHHHHHHHhCcCChhhCC---CHHHHhhCCCC
Confidence 22223322 2234556778899999999999999999999 99999999998
No 209
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.5e-39 Score=342.94 Aligned_cols=255 Identities=23% Similarity=0.421 Sum_probs=213.9
Q ss_pred ccCCcEEEEEeeccCceEEEEEEEC----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKR----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk----~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~ 662 (1013)
.+++|++.+.||+|+||+||+|.+. .++..||+|.+.... .......+.+|+.+++.++||||+++++++....
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 80 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ 80 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC
Confidence 4578999999999999999999853 456789999987532 2344567889999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC
Q 001783 663 NLYLVMEYLNGGDLYSLLRNL-----------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD 725 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~-----------------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d 725 (1013)
..|+||||+++++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence 999999999999999998532 247888999999999999999999999999999999999999
Q ss_pred CcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeec
Q 001783 726 GHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWS 805 (1013)
Q Consensus 726 G~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWS 805 (1013)
+.+||+|||+++...... .........++..|+|||++.+..++.++||||
T Consensus 161 ~~~kl~dfg~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s 211 (283)
T cd05090 161 LHVKISDLGLSREIYSAD-----------------------------YYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWS 211 (283)
T ss_pred CcEEeccccccccccCCc-----------------------------ceecccCCCccceecChHHhccCCCCchhhhHH
Confidence 999999999987411000 001122345678899999999888999999999
Q ss_pred hhHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 806 VGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 806 LGVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
|||++|||++ |.+||.+.+...+.+.+..... +..+..++..+.++|.+||+.||.+|| ++.+|+++
T Consensus 212 lG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~~i~~~ 279 (283)
T cd05090 212 FGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQL--LPCSEDCPPRMYSLMTECWQEGPSRRP---RFKDIHTR 279 (283)
T ss_pred HHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcccCcccCc---CHHHHHHH
Confidence 9999999998 9999988877776666655432 345677899999999999999999999 88888775
No 210
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.1e-39 Score=338.65 Aligned_cols=252 Identities=24% Similarity=0.404 Sum_probs=214.9
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEE
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~Ly 665 (1013)
....+|++.+.||.|+||.||+|.++.+++.||+|++.... .....+.+|+.+++.++||||+++++++.....+|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 78 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE
Confidence 34567999999999999999999999999999999987542 23467889999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 666 LVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
+||||+++++|.+++... ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~- 157 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD- 157 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccc-
Confidence 999999999999999654 35899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g 822 (1013)
. ........+++.|+|||.+.+..++.++|||||||++|||++ |..||.+
T Consensus 158 ------------~-----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 208 (263)
T cd05052 158 ------------T-----------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 208 (263)
T ss_pred ------------e-----------------eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 0 000112234678999999999999999999999999999998 9999998
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.+..+.+..+..... +..+..++.++.+||.+||+.||.+|| ++.++++
T Consensus 209 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~~l~~ 257 (263)
T cd05052 209 IDLSQVYELLEKGYR--MERPEGCPPKVYELMRACWQWNPSDRP---SFAEIHQ 257 (263)
T ss_pred CCHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHccCCcccCC---CHHHHHH
Confidence 888777777765322 345677899999999999999999999 8888765
No 211
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=8.8e-40 Score=352.02 Aligned_cols=256 Identities=32% Similarity=0.563 Sum_probs=218.7
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
..|+....||.|+||.||+|.+..+++.||+|++..... ...+.+.+|+.++..++||||+++++.+...+..|+||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence 345566689999999999999999999999999865432 23456789999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||+++++|..++.. ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 98 e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~------ 170 (297)
T cd06659 98 EFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD------ 170 (297)
T ss_pred ecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc------
Confidence 99999999998765 56899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
.......+|++.|+|||++.+..++.++|+|||||++|||++|+.||......+.
T Consensus 171 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~ 225 (297)
T cd06659 171 -------------------------VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA 225 (297)
T ss_pred -------------------------cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 0112245789999999999988899999999999999999999999988777666
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
...+..........+..++..+.++|.+||+.+|.+|| ++.++++||||..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rp---s~~~ll~~~~~~~ 276 (297)
T cd06659 226 MKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERA---TAQELLDHPFLLQ 276 (297)
T ss_pred HHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCc---CHHHHhhChhhcc
Confidence 66655444333344556889999999999999999999 9999999999975
No 212
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=6.1e-39 Score=330.18 Aligned_cols=254 Identities=33% Similarity=0.630 Sum_probs=221.9
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++.+.||.|++|.||+|.+..+++.||+|.+...... ......+.+|++++.+++|||++++++++.+.+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 589999999999999999999999999999999876432 3456789999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
|+++++|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~------- 152 (254)
T cd06627 80 YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDV------- 152 (254)
T ss_pred cCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCC-------
Confidence 9999999999988888999999999999999999999999999999999999999999999999998741100
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHH
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIF 829 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~ 829 (1013)
........|+..|+|||.+.+..++.++||||||+++|+|++|..||.........
T Consensus 153 ------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~ 208 (254)
T cd06627 153 ------------------------SKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAAL 208 (254)
T ss_pred ------------------------cccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence 00012346889999999998888899999999999999999999999876655544
Q ss_pred HhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 830 DNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 830 qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
..+... ..+.++..++..+.++|.+||..+|++|| ++.+++.||||
T Consensus 209 ~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---~~~~~l~~~~~ 254 (254)
T cd06627 209 FRIVQD--DHPPLPEGISPELKDFLMQCFQKDPNLRP---TAKQLLKHPWI 254 (254)
T ss_pred HHHhcc--CCCCCCCCCCHHHHHHHHHHHhCChhhCc---CHHHHhcCCCC
Confidence 444432 33456678899999999999999999999 99999999998
No 213
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.5e-39 Score=346.32 Aligned_cols=258 Identities=31% Similarity=0.513 Sum_probs=212.5
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--ceE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENL 664 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~--~~L 664 (1013)
.+++|++.+.||.|+||.||+|.+..+++.+|+|.++..... ......+.+|+.+++.++||||+++++++... ..+
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKI 81 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcE
Confidence 346899999999999999999999999999999999765432 22334567899999999999999999998877 889
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
|+||||+.+ +|.+++... ..+++..++.++.||+.||+|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 82 ~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~- 159 (293)
T cd07843 82 YMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP- 159 (293)
T ss_pred EEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCC-
Confidence 999999975 999988764 45999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC-CCccceeechhHHHHHHHhCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG-HGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~-ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
........+++.|+|||++.+.. ++.++|||||||++|+|++|.+||..
T Consensus 160 ------------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~ 209 (293)
T cd07843 160 ------------------------------LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPG 209 (293)
T ss_pred ------------------------------ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCC
Confidence 00112346788999999987644 68999999999999999999999988
Q ss_pred CChhHHHHhhhccCC-------------------CC---------CCCCCC-CCHHHHHHHHHhccCCcCCcCCCCCHHH
Q 001783 823 EHPQQIFDNILNRKI-------------------PW---------PRVPEE-MSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~-------------------~~---------p~lp~~-lS~elkDLI~rMLqkDPekRPg~~TAeE 873 (1013)
....+.+.++..... .+ ..++.. +++.+.+||++||+.||++|| ++.|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---t~~e 286 (293)
T cd07843 210 KSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRI---SAED 286 (293)
T ss_pred CChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccC---CHHH
Confidence 776665554432110 00 012222 588999999999999999999 9999
Q ss_pred HHhCCCC
Q 001783 874 VKQHVFF 880 (1013)
Q Consensus 874 LLqHPFF 880 (1013)
+++||||
T Consensus 287 ll~~~~f 293 (293)
T cd07843 287 ALKHPYF 293 (293)
T ss_pred HhcCCCC
Confidence 9999998
No 214
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.6e-39 Score=334.90 Aligned_cols=254 Identities=30% Similarity=0.540 Sum_probs=218.4
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++.+.||.|+||.||+|.++.+|..||+|.+...... ....+.+.+|+.+++.++||||+++++.+......|+|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP-VKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc-chhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 589999999999999999999999999999998765332 2234677899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCc-EEEeecCCccccccCCCCC
Q 001783 670 YLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGH-IKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~-VKLiDFGLAk~~~~~s~dd 746 (1013)
|+++++|.+++.+.. .+++..+..++.||+.||.|||++||+|+||||+||+++.++. +||+|||.+.... ..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~-~~--- 155 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN-DS--- 155 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhcc-CC---
Confidence 999999999997643 4799999999999999999999999999999999999998864 6999999886310 00
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..
T Consensus 156 ---------------------------~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 208 (257)
T cd08225 156 ---------------------------MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH 208 (257)
T ss_pred ---------------------------cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH
Confidence 00112346899999999998888999999999999999999999999988777
Q ss_pred HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
+....+..... +..+..++.++.++|.+||..+|++|| ++.++++||||
T Consensus 209 ~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rp---t~~~ll~~~~~ 257 (257)
T cd08225 209 QLVLKICQGYF--APISPNFSRDLRSLISQLFKVSPRDRP---SITSILKRPFL 257 (257)
T ss_pred HHHHHHhcccC--CCCCCCCCHHHHHHHHHHhccChhhCc---CHHHHhhCCCC
Confidence 77766655432 344567889999999999999999999 99999999997
No 215
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.9e-39 Score=345.59 Aligned_cols=260 Identities=32% Similarity=0.531 Sum_probs=211.7
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
+++|++.+.||.|+||+||+|.++.+|+.||+|.+..... .......+.+|+.+++.++||||+++++++.+..+.|+|
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence 4689999999999999999999999999999999865432 223345678899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC-CCcEEEeecCCccccccCCC
Q 001783 668 MEYLNGGDLYSLLRNLGC--LDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~--LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|||++ ++|..++..... +++..++.++.||+.||+|||++||+||||||+||+++. ++.+||+|||++......
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~-- 156 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP-- 156 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC--
Confidence 99996 488888865433 588899999999999999999999999999999999985 567999999998631000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
........|++.|+|||++.+ ..++.++|||||||++|+|++|.+||...
T Consensus 157 -----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~ 207 (294)
T PLN00009 157 -----------------------------VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGD 207 (294)
T ss_pred -----------------------------ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 001123467899999999876 45789999999999999999999999877
Q ss_pred ChhHHHHhhhccCC-C-----------------CCC--------CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 824 HPQQIFDNILNRKI-P-----------------WPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~-~-----------------~p~--------lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
...+.+.++..... + ++. ....+++++.++|.+||+.||++|| ++.++++|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp---s~~~~l~~ 284 (294)
T PLN00009 208 SEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRI---TARAALEH 284 (294)
T ss_pred CHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCc---CHHHHhcC
Confidence 66555444432100 0 000 1235788999999999999999999 99999999
Q ss_pred CCCCCC
Q 001783 878 VFFKDI 883 (1013)
Q Consensus 878 PFFk~I 883 (1013)
|||.++
T Consensus 285 ~~~~~~ 290 (294)
T PLN00009 285 EYFKDL 290 (294)
T ss_pred chHhHH
Confidence 999864
No 216
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.1e-39 Score=347.96 Aligned_cols=260 Identities=34% Similarity=0.567 Sum_probs=218.9
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEE
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~Ly 665 (1013)
...++|++++.||.|+||.||++.+..+++.||+|.+.... ....+.+.+|+.+++.++||||+++++.+...+..|
T Consensus 16 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~ 92 (293)
T cd06647 16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELW 92 (293)
T ss_pred CchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEE
Confidence 33478999999999999999999998899999999986432 223467889999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
+|+||+++++|.+++.+ ..+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus 93 lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~--- 168 (293)
T cd06647 93 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--- 168 (293)
T ss_pred EEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccc---
Confidence 99999999999999876 45889999999999999999999999999999999999999999999999987631000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
........|++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+.
T Consensus 169 ----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~ 220 (293)
T cd06647 169 ----------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP 220 (293)
T ss_pred ----------------------------ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 0011234689999999999988899999999999999999999999987765
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
......+.....+....+..++..+.+||.+||..+|.+|| ++.+++.||||+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---~~~~il~h~~~~~~ 275 (293)
T cd06647 221 LRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRG---SAKELLQHPFLKIA 275 (293)
T ss_pred hhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCc---CHHHHhcCHHHhcC
Confidence 54443333222221123445788999999999999999999 99999999999864
No 217
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=6.6e-39 Score=336.38 Aligned_cols=259 Identities=29% Similarity=0.506 Sum_probs=218.3
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccc--cccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--ceE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKAD--MIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENL 664 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~--~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~--~~L 664 (1013)
.+|++.+.||+|+||.||+|.+..+++.||+|++.... .........+.+|+.+++.++||||+++++.+.+. ..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47999999999999999999999999999999975432 12234567888999999999999999999998764 468
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
+++|||++|++|.+++.+.+.+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||+++.....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~-- 159 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI-- 159 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccc--
Confidence 999999999999999988778999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
.. .........|+..|+|||++.+..++.++|+|||||++|+|++|++||....
T Consensus 160 ------~~--------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 213 (264)
T cd06653 160 ------CM--------------------SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE 213 (264)
T ss_pred ------cc--------------------cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC
Confidence 00 0001123568999999999999889999999999999999999999998776
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
......++.... ..+.+|..+++.+.++|.+||. +|..|| ++.+++.|||.
T Consensus 214 ~~~~~~~~~~~~-~~~~~p~~~~~~~~~~i~~~l~-~~~~r~---~~~~~~~~~~~ 264 (264)
T cd06653 214 AMAAIFKIATQP-TKPMLPDGVSDACRDFLKQIFV-EEKRRP---TAEFLLRHPFV 264 (264)
T ss_pred HHHHHHHHHcCC-CCCCCCcccCHHHHHHHHHHhc-CcccCc---cHHHHhcCCCC
Confidence 655555554332 2245678899999999999999 579999 99999999983
No 218
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=6.7e-40 Score=352.13 Aligned_cols=257 Identities=32% Similarity=0.539 Sum_probs=217.7
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
+.|.....||.|+||.||++.+..++..||||.+.... ....+.+.+|+.+++.++||||+++++.+...++.|+||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 45666788999999999999999999999999986532 234567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||+++++|.+++.. +.+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 99 e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------ 171 (292)
T cd06658 99 EFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE------ 171 (292)
T ss_pred eCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc------
Confidence 99999999998855 56899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
........||+.|+|||++.+..++.++|+|||||++|||++|..||...+....
T Consensus 172 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~ 226 (292)
T cd06658 172 -------------------------VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA 226 (292)
T ss_pred -------------------------cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 0011235789999999999988899999999999999999999999988777666
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
+..+..............+..+.+||.+||..||.+|| +++++++||||+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~il~~~~~~~~ 278 (292)
T cd06658 227 MRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRA---TAQELLQHPFLKLA 278 (292)
T ss_pred HHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCc---CHHHHhhChhhhcc
Confidence 55554332222222345788999999999999999999 99999999999853
No 219
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.5e-39 Score=341.17 Aligned_cols=254 Identities=30% Similarity=0.544 Sum_probs=211.3
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++++.||.|++|.||+|++..+|..||+|+++.... ......+.+|+.+++.++||||+++++.+.+.+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 58999999999999999999999999999999876532 2233567789999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 670 YLNGGDLYSLLRNL---GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 670 y~~GGSL~dlL~~~---g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|+.+ +|.+++... ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~---- 153 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP---- 153 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC----
Confidence 9985 898888654 35899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
........+|+.|++||++.+. .++.++|||||||++|+|++|.+||.+.+.
T Consensus 154 ---------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~ 206 (284)
T cd07836 154 ---------------------------VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNN 206 (284)
T ss_pred ---------------------------ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence 0011234678999999998764 578999999999999999999999988776
Q ss_pred hHHHHhhhccC------------------CCCCC--------CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCC
Q 001783 826 QQIFDNILNRK------------------IPWPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1013)
Q Consensus 826 ~ei~qkIl~~~------------------~~~p~--------lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPF 879 (1013)
.+.+..+.... ..++. +.+.++..+.++|.+||+.||.+|| ++.++++|||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---~~~~~l~~~~ 283 (284)
T cd07836 207 EDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRI---SAHDALQHPW 283 (284)
T ss_pred HHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCC---CHHHHhcCCC
Confidence 66555543211 00010 1124678899999999999999999 9999999999
Q ss_pred C
Q 001783 880 F 880 (1013)
Q Consensus 880 F 880 (1013)
|
T Consensus 284 f 284 (284)
T cd07836 284 F 284 (284)
T ss_pred C
Confidence 8
No 220
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3.2e-39 Score=343.85 Aligned_cols=264 Identities=29% Similarity=0.461 Sum_probs=208.3
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc--
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE-- 662 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~-- 662 (1013)
...+++|++++.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.++||||+++++++....
T Consensus 8 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (310)
T cd07865 8 CDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATP 86 (310)
T ss_pred cchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCCCCCccceEEEEeccccc
Confidence 4456789999999999999999999999999999999865432 1222345668999999999999999999877653
Q ss_pred ------eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCC
Q 001783 663 ------NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1013)
Q Consensus 663 ------~LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1013)
..|+||||+.+ +|.+.+.+. ..+++..++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||+
T Consensus 87 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 87 YNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred ccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCC
Confidence 46999999965 888888654 3689999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHH
Q 001783 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELI 814 (1013)
Q Consensus 736 Ak~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELL 814 (1013)
+......... .........++..|+|||++.+. .++.++||||||+++|+|+
T Consensus 166 ~~~~~~~~~~---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~ 218 (310)
T cd07865 166 ARAFSLSKNS---------------------------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMW 218 (310)
T ss_pred cccccCCccc---------------------------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHH
Confidence 8742110000 00011234688999999998764 4788999999999999999
Q ss_pred hCCCCCCCCChhHHHHhhhccCCC-------------------CCCC----------CCCCCHHHHHHHHHhccCCcCCc
Q 001783 815 VGIPPFNAEHPQQIFDNILNRKIP-------------------WPRV----------PEEMSPEAHDLIDRFLTEDPHQR 865 (1013)
Q Consensus 815 TGk~PF~g~~~~ei~qkIl~~~~~-------------------~p~l----------p~~lS~elkDLI~rMLqkDPekR 865 (1013)
+|.+||.+.+.......+...... ++.. +...+..+.+||.+||..||.+|
T Consensus 219 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R 298 (310)
T cd07865 219 TRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKR 298 (310)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhc
Confidence 999999887665443333221100 0000 01135678899999999999999
Q ss_pred CCCCCHHHHHhCCCC
Q 001783 866 LGSGGASEVKQHVFF 880 (1013)
Q Consensus 866 Pg~~TAeELLqHPFF 880 (1013)
| +++++++||||
T Consensus 299 ~---t~~e~l~h~~f 310 (310)
T cd07865 299 I---DADTALNHDFF 310 (310)
T ss_pred c---CHHHHhcCCCC
Confidence 9 99999999998
No 221
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.9e-39 Score=340.97 Aligned_cols=255 Identities=31% Similarity=0.572 Sum_probs=220.3
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
-|++++.||.|+||.||+|.+..++..||+|++..... ......+.+|+.++..++||||+++++.+......|+|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 38889999999999999999999999999999865432 3345678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
|+++++|..++.+ +.+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++.....
T Consensus 83 ~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~-------- 153 (277)
T cd06641 83 YLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD-------- 153 (277)
T ss_pred eCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceeccc--------
Confidence 9999999999875 5689999999999999999999999999999999999999999999999999863100
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHH
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIF 829 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~ 829 (1013)
.........|+..|+|||.+.+..++.++|+|||||++|+|++|.+||.........
T Consensus 154 -----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~ 210 (277)
T cd06641 154 -----------------------TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVL 210 (277)
T ss_pred -----------------------chhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHH
Confidence 000112356889999999998888899999999999999999999999887766666
Q ss_pred HhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 830 DNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 830 qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
..+.... .+.++..++.++.++|.+||+.+|.+|| ++.++++||||...
T Consensus 211 ~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~~l~~~~~~~~ 259 (277)
T cd06641 211 FLIPKNN--PPTLEGNYSKPLKEFVEACLNKEPSFRP---TAKELLKHKFIVRF 259 (277)
T ss_pred HHHhcCC--CCCCCcccCHHHHHHHHHHccCChhhCc---CHHHHHhCHHHhhh
Confidence 6654433 2445667899999999999999999999 99999999999753
No 222
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.5e-40 Score=348.37 Aligned_cols=258 Identities=31% Similarity=0.565 Sum_probs=219.9
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
+.|++++.||.|+||.||+|.+..++..||+|++..... ....+.+.+|+.+++.++||||+++++.+......|+||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 347788899999999999999999999999999875432 234567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||+++++|.+++.. +.+++..++.++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~------ 154 (277)
T cd06642 82 EYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT------ 154 (277)
T ss_pred EccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCc------
Confidence 99999999998865 56899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
........|+..|+|||++.+..++.++|+|||||++|||++|..||........
T Consensus 155 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~ 209 (277)
T cd06642 155 -------------------------QIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV 209 (277)
T ss_pred -------------------------chhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH
Confidence 0011234688999999999998899999999999999999999999987666555
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCCh
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINW 885 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw 885 (1013)
...+.... .+..+..++.++.+||.+||..+|.+|| ++.++++||||....+
T Consensus 210 ~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~~~~~ 261 (277)
T cd06642 210 LFLIPKNS--PPTLEGQYSKPFKEFVEACLNKDPRFRP---TAKELLKHKFITRYTK 261 (277)
T ss_pred HhhhhcCC--CCCCCcccCHHHHHHHHHHccCCcccCc---CHHHHHHhHHHHHHhh
Confidence 55443332 2344566889999999999999999999 9999999999976544
No 223
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.2e-39 Score=341.20 Aligned_cols=258 Identities=31% Similarity=0.512 Sum_probs=212.9
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--ceEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENLYL 666 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~--~~LyL 666 (1013)
++|+..+.||.|++|.||+|.+..+++.||+|++..... ......+.+|+++++.++||||++++++|.+. ..+|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 469999999999999999999999999999999875432 24456788999999999999999999988654 47999
Q ss_pred EEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 667 VMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
||||++|++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~- 157 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN- 157 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccc-
Confidence 9999999999988753 35689999999999999999999999999999999999999999999999999863100
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
.......++..|+|||.+.+..++.++|||||||++|+|++|..||..
T Consensus 158 --------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 205 (287)
T cd06621 158 --------------------------------SLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPP 205 (287)
T ss_pred --------------------------------cccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCc
Confidence 001124578899999999998999999999999999999999999976
Q ss_pred C-----ChhHHHHhhhccCCC-CCCCC---CCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCC
Q 001783 823 E-----HPQQIFDNILNRKIP-WPRVP---EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1013)
Q Consensus 823 ~-----~~~ei~qkIl~~~~~-~p~lp---~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Id 884 (1013)
. ...+....+.....+ ++..+ ...++.+.+||.+||.+||.+|| ++.|+++||||++..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~eil~~~~~~~~~ 273 (287)
T cd06621 206 EGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRP---TPWDMLEHPWIKAQM 273 (287)
T ss_pred ccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCC---CHHHHHhCccccccc
Confidence 5 233444444332211 11111 23567899999999999999999 999999999998653
No 224
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.1e-38 Score=325.06 Aligned_cols=250 Identities=35% Similarity=0.609 Sum_probs=215.7
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++.+.||.|++|.||++.+..+++.|++|++..... .....+.+|+.+++.++||||+++++.+......|+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 58999999999999999999998999999999976542 355788899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 670 YLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 670 y~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
|++|++|.+++... +.+++..+..++.|++.||.|||.+|++||||+|+||+++.++.++|+|||.+......
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~------ 151 (253)
T cd05122 78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT------ 151 (253)
T ss_pred cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccc------
Confidence 99999999999776 67999999999999999999999999999999999999999999999999988631000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
.......|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+....
T Consensus 152 --------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 205 (253)
T cd05122 152 --------------------------KARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA 205 (253)
T ss_pred --------------------------ccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH
Confidence 001235688999999999988899999999999999999999999988755554
Q ss_pred HHhhhccCCCCCCCCCC--CCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCC
Q 001783 829 FDNILNRKIPWPRVPEE--MSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~--lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPF 879 (1013)
...+.... .+..+.. ++..+.++|.+||+.||.+|| ++.++++|||
T Consensus 206 ~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---t~~~~l~~~~ 253 (253)
T cd05122 206 LFKIATNG--PPGLRNPEKWSDEFKDFLKKCLQKNPEKRP---TAEQLLKHPF 253 (253)
T ss_pred HHHHHhcC--CCCcCcccccCHHHHHHHHHHccCChhhCC---CHHHHhcCCC
Confidence 44443322 2233333 489999999999999999999 9999999998
No 225
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=5.5e-39 Score=340.80 Aligned_cols=261 Identities=35% Similarity=0.593 Sum_probs=224.1
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.+.|++.+.||.|+||.||+|.+..++..||+|++..... ....+.+|+.+++.++|+||+++++.+......|+|
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 3569999999999999999999998999999999976432 456788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g-~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
+||++|++|.+++...+ .++...+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.....
T Consensus 94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~----- 168 (286)
T cd06614 94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK----- 168 (286)
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhcc-----
Confidence 99999999999998876 899999999999999999999999999999999999999999999999998763100
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
.........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..
T Consensus 169 --------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~ 222 (286)
T cd06614 169 --------------------------EKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL 222 (286)
T ss_pred --------------------------chhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH
Confidence 000112346889999999999888999999999999999999999999887776
Q ss_pred HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChh
Q 001783 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWD 886 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~ 886 (1013)
.....+.....+....+..++..+.+||.+||+.+|.+|| ++.++++|+||+...|.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~il~~~~~~~~~~~ 279 (286)
T cd06614 223 RALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRP---SAEELLQHPFLKKACPK 279 (286)
T ss_pred HHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCc---CHHHHhhChHhhccCch
Confidence 6655555433322222334889999999999999999999 99999999999986654
No 226
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=4.6e-39 Score=335.49 Aligned_cols=249 Identities=25% Similarity=0.423 Sum_probs=211.4
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.++|++++.||+|+||.||+|+++ .+..+|+|.+..... ....+.+|+.+|+.++||||+++++++.....+|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 77 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEE
Confidence 467999999999999999999885 456799998865432 235678899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|||++||+|.+++... +.+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~--- 154 (256)
T cd05114 78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE--- 154 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCc---
Confidence 9999999999999753 568999999999999999999999999999999999999999999999999987310000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~ 825 (1013)
........++..|+|||++.+..++.++|+|||||++|+|++ |++||...+.
T Consensus 155 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~ 207 (256)
T cd05114 155 ---------------------------YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN 207 (256)
T ss_pred ---------------------------eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH
Confidence 000112345678999999998889999999999999999999 9999998888
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.+....+..... +..+...+..+.+|+.+||+.||.+|| ++.++++
T Consensus 208 ~~~~~~i~~~~~--~~~~~~~~~~~~~li~~c~~~~p~~Rp---s~~~l~~ 253 (256)
T cd05114 208 YEVVEMISRGFR--LYRPKLASMTVYEVMYSCWHEKPEGRP---TFAELLR 253 (256)
T ss_pred HHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHccCCcccCc---CHHHHHH
Confidence 888887766443 234556788999999999999999999 8998875
No 227
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.9e-39 Score=340.19 Aligned_cols=256 Identities=32% Similarity=0.588 Sum_probs=216.1
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC---CCCeeEEEeeeeccceEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR---NPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~---HPNIVkL~e~fed~~~LyL 666 (1013)
.|++++.||.|+||.||+|.+..+++.||+|+++... .......+.+|+.+++.++ ||||+++++++......|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 4888999999999999999999999999999987542 2334567888999999986 9999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
||||++|++|.+++.. +.+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~---- 154 (277)
T cd06917 80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN---- 154 (277)
T ss_pred EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC----
Confidence 9999999999999866 57999999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
........|+..|+|||.+.+ ..++.++|+|||||++|+|++|.+||.....
T Consensus 155 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~ 207 (277)
T cd06917 155 ---------------------------SSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA 207 (277)
T ss_pred ---------------------------ccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 011223578999999999875 4578999999999999999999999988766
Q ss_pred hHHHHhhhccCCCCCCCCC-CCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCC
Q 001783 826 QQIFDNILNRKIPWPRVPE-EMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~-~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Id 884 (1013)
......+.... .+.++. .++.++.+||.+||+.||.+|| ++.+++.||||++..
T Consensus 208 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---~~~~il~~~~~~~~~ 262 (277)
T cd06917 208 FRAMMLIPKSK--PPRLEDNGYSKLLREFVAACLDEEPKERL---SAEELLKSKWIKAHS 262 (277)
T ss_pred hhhhhccccCC--CCCCCcccCCHHHHHHHHHHcCCCcccCc---CHHHHhhChHhhccc
Confidence 55544433322 233333 3788999999999999999999 999999999998654
No 228
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6.1e-39 Score=337.04 Aligned_cols=255 Identities=23% Similarity=0.357 Sum_probs=214.5
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCC-----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTT-----GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC 660 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~t-----gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed 660 (1013)
...++|++.+.||+|+||.||+|.++.. +..||+|.+.... .......+.+|+.++..++||||+++++++..
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVST 80 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC
Confidence 3457899999999999999999998643 4789999986543 22344678899999999999999999999999
Q ss_pred cceEEEEEEeccCCChHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEE
Q 001783 661 RENLYLVMEYLNGGDLYSLLRNL----------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKL 730 (1013)
Q Consensus 661 ~~~LyLVMEy~~GGSL~dlL~~~----------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKL 730 (1013)
....|+||||+++|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus 81 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 81 GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEE
Confidence 99999999999999999999643 23678899999999999999999999999999999999999999999
Q ss_pred eecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHH
Q 001783 731 TDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIIL 810 (1013)
Q Consensus 731 iDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVIL 810 (1013)
+|||+++...... .........+|..|+|||++.+..++.++|||||||++
T Consensus 161 ~dfg~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 211 (277)
T cd05032 161 GDFGMTRDIYETD-----------------------------YYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVL 211 (277)
T ss_pred CCcccchhhccCc-----------------------------ccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHH
Confidence 9999987311000 00011234578899999999988899999999999999
Q ss_pred HHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 811 FELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 811 YELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
|||++ |.+||.+.+..+....+.... .+..+..++.++.+||.+||+.+|.+|| |+.++++
T Consensus 212 ~el~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~l~~ 273 (277)
T cd05032 212 WEMATLAEQPYQGLSNEEVLKFVIDGG--HLDLPENCPDKLLELMRMCWQYNPKMRP---TFLEIVS 273 (277)
T ss_pred HHhhccCCCCCccCCHHHHHHHHhcCC--CCCCCCCCCHHHHHHHHHHcCCChhhCC---CHHHHHH
Confidence 99998 999999888877777776432 3445677899999999999999999999 8998876
No 229
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.5e-39 Score=339.06 Aligned_cols=251 Identities=29% Similarity=0.485 Sum_probs=204.8
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeecc--ceEEEE
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCR--ENLYLV 667 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~--~~LyLV 667 (1013)
|++++.||+|+||.||+|.+..+++.||+|++++... .... ....+|+.++.++. ||||+++++++.+. +.+|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 7889999999999999999999999999999876432 1122 23457888888885 99999999999987 889999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|||+.+ +|.+.+... +.+++..++.++.||+.||+|||++||+||||||+||+++. +.+||+|||+++.....
T Consensus 79 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~---- 152 (282)
T cd07831 79 FELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK---- 152 (282)
T ss_pred EecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC----
Confidence 999975 888888653 57899999999999999999999999999999999999999 99999999998731000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
.......+|+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+.
T Consensus 153 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~ 204 (282)
T cd07831 153 ----------------------------PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE 204 (282)
T ss_pred ----------------------------CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH
Confidence 00112467899999998754 4578899999999999999999999988776
Q ss_pred hHHHHhhhccC------------------CCCCC--------CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCC
Q 001783 826 QQIFDNILNRK------------------IPWPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1013)
Q Consensus 826 ~ei~qkIl~~~------------------~~~p~--------lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPF 879 (1013)
.+.+..+.... ..++. ....++.++.+||.+||.++|.+|| +++++++|||
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---~~~~~l~~~~ 281 (282)
T cd07831 205 LDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERI---TAKQALRHPY 281 (282)
T ss_pred HHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCccccc---CHHHHhhCCC
Confidence 65554443211 01111 1135689999999999999999999 9999999999
Q ss_pred C
Q 001783 880 F 880 (1013)
Q Consensus 880 F 880 (1013)
|
T Consensus 282 ~ 282 (282)
T cd07831 282 F 282 (282)
T ss_pred C
Confidence 8
No 230
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4.2e-39 Score=340.19 Aligned_cols=255 Identities=22% Similarity=0.348 Sum_probs=212.1
Q ss_pred ccCCcEEEEEeeccCceEEEEEEEC-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKR-----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR 661 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk-----~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~ 661 (1013)
.-++|++.+.||+|+||.||+|.++ .++..||+|++.... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 3467999999999999999999875 245689999986532 223345688999999999999999999999999
Q ss_pred ceEEEEEEeccCCChHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEe
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNLG----------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLT 731 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~dlL~~~g----------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLi 731 (1013)
...|+||||+++|+|.+++.+.. .++...+..++.|++.||.|||+.|++||||||+|||++.++.++|+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEEC
Confidence 99999999999999999996532 25678889999999999999999999999999999999999999999
Q ss_pred ecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHH
Q 001783 732 DFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILF 811 (1013)
Q Consensus 732 DFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILY 811 (1013)
|||+++....... ........+++.|||||++.+..++.++|||||||++|
T Consensus 162 dfg~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 212 (277)
T cd05062 162 DFGMTRDIYETDY-----------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 212 (277)
T ss_pred CCCCccccCCcce-----------------------------eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHH
Confidence 9999873110000 00011235678899999999888999999999999999
Q ss_pred HHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 812 ELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 812 ELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
||++ |..||.+.+..+....+..... +..+..++..+.+||.+||+.||.+|| ++.+++++
T Consensus 213 el~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~e~l~~ 274 (277)
T cd05062 213 EIATLAEQPYQGMSNEQVLRFVMEGGL--LDKPDNCPDMLFELMRMCWQYNPKMRP---SFLEIISS 274 (277)
T ss_pred HHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 9999 7999998888777776665443 345667899999999999999999999 89998875
No 231
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2e-39 Score=362.70 Aligned_cols=259 Identities=25% Similarity=0.351 Sum_probs=209.7
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEE-----CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEee
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKK-----RTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYS 657 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArd-----k~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~ 657 (1013)
+....++|++.+.||+|+||+||+|.+ ..++..||+|+++.... ....+.+.+|+.+|..+ +||||++++++
T Consensus 30 ~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~ 107 (375)
T cd05104 30 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGA 107 (375)
T ss_pred cccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeee
Confidence 344456899999999999999999974 35677899999875432 23446788999999999 89999999999
Q ss_pred eeccceEEEEEEeccCCChHHHHHhcC-----------------------------------------------------
Q 001783 658 FTCRENLYLVMEYLNGGDLYSLLRNLG----------------------------------------------------- 684 (1013)
Q Consensus 658 fed~~~LyLVMEy~~GGSL~dlL~~~g----------------------------------------------------- 684 (1013)
+......|+|||||+||+|.+++....
T Consensus 108 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
T cd05104 108 CTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRR 187 (375)
T ss_pred eccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccc
Confidence 999999999999999999999986421
Q ss_pred ----------------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 685 ----------------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 685 ----------------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 188 SVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred ccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 3678889999999999999999999999999999999999999999999998731100
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFN 821 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~ 821 (1013)
. .........++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 268 ~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~ 318 (375)
T cd05104 268 S-----------------------------NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYP 318 (375)
T ss_pred c-----------------------------cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCC
Confidence 0 0000112345678999999999999999999999999999998 899998
Q ss_pred CCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.......+.+.+..... +..+...+.++.+||.+||+.||.+|| ++.+|++.
T Consensus 319 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~eil~~ 370 (375)
T cd05104 319 GMPVDSKFYKMIKEGYR-MLSPECAPSEMYDIMKSCWDADPLKRP---TFKQIVQL 370 (375)
T ss_pred CCCchHHHHHHHHhCcc-CCCCCCCCHHHHHHHHHHccCChhHCc---CHHHHHHH
Confidence 76544444444433322 223456788999999999999999999 89988864
No 232
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=3.2e-39 Score=343.37 Aligned_cols=256 Identities=29% Similarity=0.499 Sum_probs=204.3
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.++|++++.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++.++|+||+++++++......|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 3679999999999999999999999999999999865432 12224567899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 668 MEYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|||+. ++|...+.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~---- 156 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIP---- 156 (291)
T ss_pred Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCC----
Confidence 99996 577776654 356889999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
........+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.
T Consensus 157 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~ 209 (291)
T cd07870 157 ---------------------------SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD 209 (291)
T ss_pred ---------------------------CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchh
Confidence 001123467899999999876 4578899999999999999999999976543
Q ss_pred -hHHHHhhhccC-CC----------CC----------------CCC--CCCCHHHHHHHHHhccCCcCCcCCCCCHHHHH
Q 001783 826 -QQIFDNILNRK-IP----------WP----------------RVP--EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1013)
Q Consensus 826 -~ei~qkIl~~~-~~----------~p----------------~lp--~~lS~elkDLI~rMLqkDPekRPg~~TAeELL 875 (1013)
.+.+..+.... .+ .+ ... ...+..+.+||.+||..||.+|| |+.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~---t~~~~l 286 (291)
T cd07870 210 VFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRI---SAQDAL 286 (291)
T ss_pred HHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCc---CHHHHh
Confidence 12222211100 00 00 000 01357899999999999999999 999999
Q ss_pred hCCCC
Q 001783 876 QHVFF 880 (1013)
Q Consensus 876 qHPFF 880 (1013)
.||||
T Consensus 287 ~h~~~ 291 (291)
T cd07870 287 LHPYF 291 (291)
T ss_pred cCCCC
Confidence 99998
No 233
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=9.9e-39 Score=332.37 Aligned_cols=252 Identities=31% Similarity=0.538 Sum_probs=213.2
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
++|++.+.||.|+||.||+|.+..+|+.||+|.++..........+.+.+|+.+++.++|+||+++++.+...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 67999999999999999999999999999999997655555555678899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 669 EYLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~----g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
||+++|+|..++.+. ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-- 159 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK-- 159 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCC--
Confidence 999999999998642 45899999999999999999999999999999999999999999999999998631100
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
........|++.|+|||.+.+..++.++|+|||||++|+|++|..||....
T Consensus 160 -----------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 210 (267)
T cd08224 160 -----------------------------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK 210 (267)
T ss_pred -----------------------------CcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC
Confidence 001123468899999999999889999999999999999999999996543
Q ss_pred --hhHHHHhhhccCCCCCCCCC-CCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 825 --PQQIFDNILNRKIPWPRVPE-EMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 825 --~~ei~qkIl~~~~~~p~lp~-~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
..+....+.... ++..+. .++..+.++|.+||..+|.+|| ++.+|++
T Consensus 211 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp---~~~~il~ 260 (267)
T cd08224 211 MNLYSLCKKIEKCD--YPPLPADHYSEELRDLVSRCINPDPEKRP---DISYVLQ 260 (267)
T ss_pred ccHHHHHhhhhcCC--CCCCChhhcCHHHHHHHHHHcCCCcccCC---CHHHHHH
Confidence 233444444332 233333 6888999999999999999999 8887765
No 234
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.2e-39 Score=395.80 Aligned_cols=262 Identities=30% Similarity=0.533 Sum_probs=215.8
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--ce
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--EN 663 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~--~~ 663 (1013)
..+++|++++.||+|+||+||+|+++.++..||+|++..... .......+..|+.+|..++|||||+++++|... ..
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 345789999999999999999999999999999999976543 334457788999999999999999999988653 57
Q ss_pred EEEEEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC-------CeeecccCCCceeecC--------
Q 001783 664 LYLVMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSL-------RVVHRDLKPDNLLIAH-------- 724 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLHs~-------GIIHRDIKPeNILLd~-------- 724 (1013)
+||||||+++|+|.++|.. .+.+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 9999999999999999865 25799999999999999999999984 4999999999999964
Q ss_pred ---------CCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-
Q 001783 725 ---------DGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG- 794 (1013)
Q Consensus 725 ---------dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g- 794 (1013)
.+.+||+|||+++.... .......+||+.|+|||++.+
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~--------------------------------~s~~~s~vGTp~YmAPEvL~ge 216 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGI--------------------------------ESMAHSCVGTPYYWSPELLLHE 216 (1021)
T ss_pred cccccccCCCCceEEccCCccccccc--------------------------------cccccccCCCccccCHHHHhcc
Confidence 23589999999873100 001123579999999999965
Q ss_pred -CCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHH
Q 001783 795 -TGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1013)
Q Consensus 795 -~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeE 873 (1013)
..++.++||||||||||||++|..||...+....+...+.....++ ....+.++.+||..||..+|.+|| ++.+
T Consensus 217 ~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp--i~~~S~eL~dLI~~~L~~dPeeRP---Sa~Q 291 (1021)
T PTZ00266 217 TKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP--IKGKSKELNILIKNLLNLSAKERP---SALQ 291 (1021)
T ss_pred CCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC--cCCCCHHHHHHHHHHhcCChhHCc---CHHH
Confidence 4588999999999999999999999976554444333333332222 245789999999999999999999 9999
Q ss_pred HHhCCCCCCCCh
Q 001783 874 VKQHVFFKDINW 885 (1013)
Q Consensus 874 LLqHPFFk~Idw 885 (1013)
+|.||||+.+..
T Consensus 292 lL~h~~ik~i~~ 303 (1021)
T PTZ00266 292 CLGYQIIKNVGP 303 (1021)
T ss_pred HhccHHHhhcCC
Confidence 999999987643
No 235
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=7.5e-39 Score=344.78 Aligned_cols=254 Identities=28% Similarity=0.438 Sum_probs=215.7
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
+.|++.+.||+|+||+||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 56999999999999999999999999999999987654444555677889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||+.| +|.+++.. .+.+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++....
T Consensus 95 e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~------- 166 (307)
T cd06607 95 EYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVS------- 166 (307)
T ss_pred HhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecC-------
Confidence 99975 77777654 4579999999999999999999999999999999999999999999999999886310
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc---cCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL---GTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~---g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
......|++.|+|||++. ...++.++||||||+++|||++|.+||...+
T Consensus 167 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~ 218 (307)
T cd06607 167 ----------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 218 (307)
T ss_pred ----------------------------CCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc
Confidence 011346888999999985 3557889999999999999999999998877
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
.......+.....+ ...+..++..+.+||.+||..||.+|| ++.+++.||||..
T Consensus 219 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~~ 272 (307)
T cd06607 219 AMSALYHIAQNDSP-TLSSNDWSDYFRNFVDSCLQKIPQDRP---SSEELLKHRFVLR 272 (307)
T ss_pred HHHHHHHHhcCCCC-CCCchhhCHHHHHHHHHHhcCChhhCc---CHHHHhcChhhcc
Confidence 66655544433221 112345788999999999999999999 9999999999975
No 236
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.3e-39 Score=342.23 Aligned_cols=262 Identities=27% Similarity=0.473 Sum_probs=211.0
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccceEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~LyLV 667 (1013)
++|+..+.||+|+||.||++.+..+++.||+|.+.+.... .....+.+|+.++.++. ||||+++++++..+...+++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~ 81 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWIC 81 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEE
Confidence 5678888999999999999999999999999998764322 34567889999999986 99999999999999999999
Q ss_pred EEeccCCChHHHH---H--hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 668 MEYLNGGDLYSLL---R--NLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 668 MEy~~GGSL~dlL---~--~~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
|||+.+ +|.++. . ..+.+++..+..++.|++.||+|||+ .||+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 82 MELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred EecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 999864 555443 2 23579999999999999999999997 5999999999999999999999999999863100
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC---CCCccceeechhHHHHHHHhCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT---GHGTTADWWSVGIILFELIVGIP 818 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~---~ys~ksDIWSLGVILYELLTGk~ 818 (1013)
........||+.|+|||++.+. .++.++|||||||++|+|++|++
T Consensus 161 --------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~ 208 (288)
T cd06616 161 --------------------------------SIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKF 208 (288)
T ss_pred --------------------------------CCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCC
Confidence 0011234688999999999876 68999999999999999999999
Q ss_pred CCCCCCh-hHHHHhhhccCCC-CC-CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhH
Q 001783 819 PFNAEHP-QQIFDNILNRKIP-WP-RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTL 888 (1013)
Q Consensus 819 PF~g~~~-~ei~qkIl~~~~~-~p-~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L 888 (1013)
||..... .+...++.....+ ++ ..+..++.++.+||.+||++||.+|| ++++|++||||+...|.+.
T Consensus 209 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~i~~~~~~~~~~~~~~ 278 (288)
T cd06616 209 PYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRP---KYKELLEHPFIKDYEERNV 278 (288)
T ss_pred CchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCc---CHHHHhcChhhhchhhcch
Confidence 9976542 1222222222211 11 12235889999999999999999999 9999999999998766544
No 237
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=7e-39 Score=330.84 Aligned_cols=252 Identities=28% Similarity=0.511 Sum_probs=220.9
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+|++.+.||.|+||.||+++++.+++.||+|.+...... ......+.+|+.+++.++||||+++++.+.+....|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 589999999999999999999999999999999765433 3345677889999999999999999999999999999999
Q ss_pred eccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 670 YLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 670 y~~GGSL~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
|+++++|..++.+ ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--- 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--- 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence 9999999999866 356899999999999999999999999999999999999999999999999998741000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+.
T Consensus 157 ------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~ 206 (256)
T cd08530 157 ------------------------------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM 206 (256)
T ss_pred ------------------------------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 11224688899999999999899999999999999999999999998887
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
......+.... ++..+..++.++.++|.+||+.+|.+|| ++.++++||+.
T Consensus 207 ~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~~l~~p~~ 256 (256)
T cd08530 207 QDLRYKVQRGK--YPPIPPIYSQDLQNFIRSMLQVKPKLRP---NCDKILASPAV 256 (256)
T ss_pred HHHHHHHhcCC--CCCCchhhCHHHHHHHHHHcCCCcccCC---CHHHHhcCCCC
Confidence 77766665543 3455667899999999999999999999 99999999974
No 238
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.5e-39 Score=337.14 Aligned_cols=254 Identities=30% Similarity=0.493 Sum_probs=212.6
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
+++|++.+.||.|+||.||+|+++.+++.||||.+.............+.+|+.+++.++||||+++++.+...+..|++
T Consensus 1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 36799999999999999999999999999999998765544555567889999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 668 MEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
|||++|++|.+++.. ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~- 159 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK- 159 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccC-
Confidence 999999999998864 346899999999999999999999999999999999999999999999999988631000
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
........|++.|+|||++.+..++.++|+||||+++|+|++|..||.+.
T Consensus 160 ------------------------------~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 209 (267)
T cd08229 160 ------------------------------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred ------------------------------CcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 00112356899999999999988999999999999999999999999765
Q ss_pred Ch--hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 824 HP--QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 824 ~~--~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.. ......+..... .+..+..++..+.+||.+||..||.+|| |+.+|++
T Consensus 210 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~i~~ 260 (267)
T cd08229 210 KMNLYSLCKKIEQCDY-PPLPSDHYSEELRQLVNMCINPDPEKRP---DITYVYD 260 (267)
T ss_pred cchHHHHhhhhhcCCC-CCCCcccccHHHHHHHHHhcCCCcccCC---CHHHHHH
Confidence 43 233333333221 1122346889999999999999999999 8887654
No 239
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-39 Score=375.06 Aligned_cols=259 Identities=34% Similarity=0.581 Sum_probs=235.8
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
...+..|.++++||+|.|++|.+|++..++..||||++.+....... ...+.+|+++|..++|||||++|.+.+....+
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~-~~k~~rev~imk~l~HPnIvkl~~v~~t~~~l 130 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSK-RQKLGREVDIMKSLNHPNIVKLFSVIETEATL 130 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHH-HHHHHHHHHHHHhcCCcceeeeeeeeeeccee
Confidence 44567799999999999999999999999999999999988764443 34589999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+||||+.+|.+++++.+.+...+..++.++.|++.|++|||+++|||||||.+||||+.+.++||+|||++.+..
T Consensus 131 ylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~---- 206 (596)
T KOG0586|consen 131 YLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD---- 206 (596)
T ss_pred EEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCC-CccceeechhHHHHHHHhCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH-GTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~y-s~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
......+.||++.|.|||++.+..| ++.+|+||||+++|.|++|.+||.+.
T Consensus 207 ----------------------------~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~ 258 (596)
T KOG0586|consen 207 ----------------------------YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ 258 (596)
T ss_pred ----------------------------ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc
Confidence 1123457899999999999999887 78999999999999999999999999
Q ss_pred ChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
+..++....+.+++. +|..++.++.+||+++|..+|.+|+ +.+++..|.|...
T Consensus 259 ~lk~Lr~rvl~gk~r---Ip~~ms~dce~lLrk~lvl~Pskr~---~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 259 NLKELRPRVLRGKYR---IPFYMSCDCEDLLRKFLVLNPSKRG---PCDQIMKDRWRND 311 (596)
T ss_pred ccccccchheeeeec---ccceeechhHHHHHHhhccCccccC---CHHHhhhhcccch
Confidence 998888888887765 4557899999999999999999999 9999999999864
No 240
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=4.8e-39 Score=331.61 Aligned_cols=247 Identities=51% Similarity=0.962 Sum_probs=219.1
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCCCh
Q 001783 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1013)
Q Consensus 597 LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL 676 (1013)
||.|+||.||++.+..+++.||+|++.+...........+..|+.+++.++||||+++++.+......|+||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 69999999999999989999999999887655556678899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcc
Q 001783 677 YSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTT 756 (1013)
Q Consensus 677 ~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gtt 756 (1013)
.+++...+.+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~-------------- 146 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSE-------------- 146 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccC--------------
Confidence 999988888999999999999999999999999999999999999999999999999998631100
Q ss_pred cCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhccC
Q 001783 757 LLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRK 836 (1013)
Q Consensus 757 l~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~~~ 836 (1013)
........|+..|+|||.+.+..++.++|+||||+++|+|++|..||...........+....
T Consensus 147 -----------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~ 209 (250)
T cd05123 147 -----------------GSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDP 209 (250)
T ss_pred -----------------CCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC
Confidence 011234578899999999998888999999999999999999999998887777777776643
Q ss_pred CCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCH---HHHHhCCCC
Q 001783 837 IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGA---SEVKQHVFF 880 (1013)
Q Consensus 837 ~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TA---eELLqHPFF 880 (1013)
. .++..++..+.+||.+||..||.+|| ++ +++++||||
T Consensus 210 ~---~~~~~~~~~l~~~i~~~l~~~p~~R~---~~~~~~~l~~~~~f 250 (250)
T cd05123 210 L---RFPEFLSPEARDLISGLLQKDPTKRL---GSGGAEEIKAHPFF 250 (250)
T ss_pred C---CCCCCCCHHHHHHHHHHhcCCHhhCC---CcccHHHHHhCCCC
Confidence 3 35567799999999999999999999 66 999999998
No 241
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=7.8e-39 Score=329.42 Aligned_cols=247 Identities=30% Similarity=0.453 Sum_probs=214.0
Q ss_pred EEeeccCceEEEEEEECCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEec
Q 001783 595 KPISRGAFGRVFLAKKRTT---GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYL 671 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~t---gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~ 671 (1013)
+.||+|+||.||+|.+... +..||+|++....... ..+.+.+|+.++..++|+||+++++++.....+|+||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 4689999999999999866 8899999997654322 4678899999999999999999999999999999999999
Q ss_pred cCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 672 NGGDLYSLLRNL---------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 672 ~GGSL~dlL~~~---------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
++++|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||.+......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 999999999875 77999999999999999999999999999999999999999999999999998741100
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFN 821 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~ 821 (1013)
.. ........+++.|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus 159 ~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 209 (262)
T cd00192 159 DY-----------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYP 209 (262)
T ss_pred cc-----------------------------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCC
Confidence 00 011234567889999999998889999999999999999999 699999
Q ss_pred CCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.....+..+.+.... ....+..++.++.++|.+||+.+|.+|| ++.++++|
T Consensus 210 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~l~~~ 260 (262)
T cd00192 210 GLSNEEVLEYLRKGY--RLPKPEYCPDELYELMLSCWQLDPEDRP---TFSELVER 260 (262)
T ss_pred CCCHHHHHHHHHcCC--CCCCCccCChHHHHHHHHHccCCcccCc---CHHHHHHh
Confidence 988888887777532 2345677899999999999999999999 99999876
No 242
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-40 Score=377.96 Aligned_cols=250 Identities=34% Similarity=0.565 Sum_probs=214.7
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GG 674 (1013)
-+||+|.||+||.|+++.|....|||.+.... ....+.+..|+.+.+.++|.|||++++++..++++-|.||-++||
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD---SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeeccccc---chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 46999999999999999999999999986543 345678889999999999999999999999999999999999999
Q ss_pred ChHHHHHh-cCCC--CHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC-CCcEEEeecCCccccccCCCCCCCCC
Q 001783 675 DLYSLLRN-LGCL--DEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKVGLINSTDDLSGP 750 (1013)
Q Consensus 675 SL~dlL~~-~g~L--sE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~~~~~s~ddls~p 750 (1013)
+|..+++. .|++ +|...-+|.+||++||.|||.+.|||||||-+|+||+. .|.+||+|||.++.. .+
T Consensus 658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRL--------Ag- 728 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRL--------AG- 728 (1226)
T ss_pred cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhh--------cc-
Confidence 99999975 4888 89999999999999999999999999999999999964 899999999998841 00
Q ss_pred CccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc--CCCCccceeechhHHHHHHHhCCCCCCCC-Chh-
Q 001783 751 AVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG--TGHGTTADWWSVGIILFELIVGIPPFNAE-HPQ- 826 (1013)
Q Consensus 751 ~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g--~~ys~ksDIWSLGVILYELLTGk~PF~g~-~~~- 826 (1013)
-+..+.++.||..|||||++.. .+|+.++|||||||++.||.||+|||..- +++
T Consensus 729 ----------------------inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA 786 (1226)
T KOG4279|consen 729 ----------------------INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA 786 (1226)
T ss_pred ----------------------CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH
Confidence 0122346889999999999975 46999999999999999999999999642 232
Q ss_pred HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
.+++-=+-. ..|.+|..+|.+++.||.+|+..||.+|| +|.++|+.||++.-
T Consensus 787 AMFkVGmyK--vHP~iPeelsaeak~FilrcFepd~~~R~---sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 787 AMFKVGMYK--VHPPIPEELSAEAKNFILRCFEPDPCDRP---SAKDLLQDPFLQHN 838 (1226)
T ss_pred hhhhhccee--cCCCCcHHHHHHHHHHHHHHcCCCcccCc---cHHHhccCcccccC
Confidence 222222222 23678899999999999999999999999 99999999999854
No 243
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6.9e-39 Score=341.54 Aligned_cols=251 Identities=27% Similarity=0.464 Sum_probs=212.7
Q ss_pred CCcEEEEEeeccCceEEEEEEEC-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKR-----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk-----~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~ 663 (1013)
++|.+.+.||.|+||+||++.+. .++..||+|.+.... ......+.+|+.++.+++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 56999999999999999999863 345679999886542 3445678899999999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEE
Q 001783 664 LYLVMEYLNGGDLYSLLRNLG-------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKL 730 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g-------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKL 730 (1013)
+|+||||+++++|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEe
Confidence 999999999999999997543 3899999999999999999999999999999999999999999999
Q ss_pred eecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHH
Q 001783 731 TDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIIL 810 (1013)
Q Consensus 731 iDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVIL 810 (1013)
+|||+++....... ........+++.|+|||++.+..++.++|||||||++
T Consensus 162 ~dfg~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il 212 (288)
T cd05093 162 GDFGMSRDVYSTDY-----------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL 212 (288)
T ss_pred ccCCccccccCCce-----------------------------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHH
Confidence 99999873110000 0011223567889999999998899999999999999
Q ss_pred HHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 811 FELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 811 YELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
|+|++ |.+||......+....+..... +..+..++.++.+|+.+||+.||.+|| ++.++++
T Consensus 213 ~~l~t~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~v~~ 274 (288)
T cd05093 213 WEIFTYGKQPWYQLSNNEVIECITQGRV--LQRPRTCPKEVYDLMLGCWQREPHMRL---NIKEIHS 274 (288)
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHccCChhhCC---CHHHHHH
Confidence 99998 9999998888888888776543 334567889999999999999999999 8888754
No 244
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.8e-39 Score=345.87 Aligned_cols=259 Identities=28% Similarity=0.487 Sum_probs=206.0
Q ss_pred CcEEEEEeeccCceEEEEEEECC--CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--ceEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRT--TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENLY 665 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~--tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~--~~Ly 665 (1013)
.|++.+.||+|+||.||+|.++. +++.||+|++.............+.+|+.++..++||||+++++++.+. ..+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48999999999999999999988 8999999999874322233446678899999999999999999999988 7899
Q ss_pred EEEEeccCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC----CCcEEEeecCCc
Q 001783 666 LVMEYLNGGDLYSLLRNL-----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH----DGHIKLTDFGLS 736 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~-----g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~----dG~VKLiDFGLA 736 (1013)
+||||+.+ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 99999975 777776432 36899999999999999999999999999999999999999 899999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHh
Q 001783 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 737 k~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLT 815 (1013)
+....... ........+||+.|+|||++.+. .++.++|||||||++|+|++
T Consensus 160 ~~~~~~~~----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~ 211 (316)
T cd07842 160 RLFNAPLK----------------------------PLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 211 (316)
T ss_pred cccCCCcc----------------------------cccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence 74110000 00112235789999999998774 57899999999999999999
Q ss_pred CCCCCCCCChhH---------HHHhhhc--------------------------cCCCCCC--------CCCCCCHHHHH
Q 001783 816 GIPPFNAEHPQQ---------IFDNILN--------------------------RKIPWPR--------VPEEMSPEAHD 852 (1013)
Q Consensus 816 Gk~PF~g~~~~e---------i~qkIl~--------------------------~~~~~p~--------lp~~lS~elkD 852 (1013)
|.+||.+..... .+..++. ....++. .....+.++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (316)
T cd07842 212 LEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFD 291 (316)
T ss_pred cCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHH
Confidence 999997654322 1111100 0000010 00156778999
Q ss_pred HHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 853 LIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 853 LI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
+|.+||+.||++|| ++.++++||||
T Consensus 292 ~i~~~l~~~P~~Rp---s~~eil~~~~f 316 (316)
T cd07842 292 LLRKLLEYDPTKRI---TAEEALEHPYF 316 (316)
T ss_pred HHHHHhcCCcccCc---CHHHHhcCCCC
Confidence 99999999999999 99999999998
No 245
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.1e-38 Score=333.06 Aligned_cols=251 Identities=23% Similarity=0.399 Sum_probs=210.9
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEE
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~Ly 665 (1013)
...++|+++++||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|+.+++.++||||+++++.+...+..|
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05072 3 IPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIY 77 (261)
T ss_pred CchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 34578999999999999999999974 56779999876532 23467889999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 666 LVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
++|||+++|+|.+++.+. ..++...+..++.||+.||+|||+.|++||||||+||+++.++.++|+|||++......
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~- 156 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN- 156 (261)
T ss_pred EEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCC-
Confidence 999999999999999653 46889999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g 822 (1013)
. ........++..|+|||++.+..++.++|||||||++|+|++ |..||..
T Consensus 157 ~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~ 207 (261)
T cd05072 157 E-----------------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPG 207 (261)
T ss_pred c-----------------------------eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCC
Confidence 0 000112346778999999998889999999999999999998 9999998
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
....+....+.... .++ .+..++.++.+||.+||..+|++|| +++++.+
T Consensus 208 ~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 256 (261)
T cd05072 208 MSNSDVMSALQRGY-RMP-RMENCPDELYDIMKTCWKEKAEERP---TFDYLQS 256 (261)
T ss_pred CCHHHHHHHHHcCC-CCC-CCCCCCHHHHHHHHHHccCCcccCc---CHHHHHH
Confidence 88777777765442 223 3456889999999999999999999 7777754
No 246
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=3.3e-39 Score=352.86 Aligned_cols=260 Identities=30% Similarity=0.523 Sum_probs=208.4
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc-----ce
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR-----EN 663 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~-----~~ 663 (1013)
++|++.+.||+|+||.||+|.+..+|+.||+|++.... .......+.+|+.+++.++||||+++++++... .+
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 67999999999999999999999999999999986422 233456778899999999999999999876544 35
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
+|+||||+.+ +|..++.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 83 ~~lv~e~~~~-~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 83 VYIVQELMET-DLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred EEEEehhccc-CHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 8999999965 88888754 579999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
. ........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+
T Consensus 161 ~----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~ 212 (336)
T cd07849 161 D----------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPG 212 (336)
T ss_pred c----------------------------ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 0 0001123578999999998765 5689999999999999999999999977
Q ss_pred CChhHHHHhhhccC----------------------C------CCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHH
Q 001783 823 EHPQQIFDNILNRK----------------------I------PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~----------------------~------~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeEL 874 (1013)
.+....+..+.... . ++.......+.++.+||.+||+.||.+|| ++.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp---t~~e~ 289 (336)
T cd07849 213 KDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRI---TVEEA 289 (336)
T ss_pred CCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCc---CHHHH
Confidence 65433322221100 0 00011134678899999999999999999 99999
Q ss_pred HhCCCCCCC
Q 001783 875 KQHVFFKDI 883 (1013)
Q Consensus 875 LqHPFFk~I 883 (1013)
++||||+..
T Consensus 290 l~hp~~~~~ 298 (336)
T cd07849 290 LAHPYLEQY 298 (336)
T ss_pred hcCcccccc
Confidence 999999854
No 247
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=6.5e-39 Score=352.88 Aligned_cols=256 Identities=29% Similarity=0.477 Sum_probs=212.9
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc-----
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE----- 662 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~----- 662 (1013)
.++|++++.||+|+||.||+|.+..++..||||++.+.. ........+.+|+.+|+.++||||++++++|....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 367999999999999999999999999999999986532 22334467889999999999999999999987654
Q ss_pred -eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 663 -NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 663 -~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
.+|+||||+ |++|..++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~- 169 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTD- 169 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccc-
Confidence 469999999 7799888864 579999999999999999999999999999999999999999999999999986310
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
.......|++.|+|||++.+ ..++.++|+|||||++|+|++|.+||
T Consensus 170 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf 216 (343)
T cd07880 170 ---------------------------------SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLF 216 (343)
T ss_pred ---------------------------------cCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 00113467899999999976 45889999999999999999999999
Q ss_pred CCCChhHHHHhhhccCCC----------------------------CCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHH
Q 001783 821 NAEHPQQIFDNILNRKIP----------------------------WPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~~----------------------------~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAe 872 (1013)
...+....+..++..... +......++..+.++|.+||+.||.+|| ++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~---t~~ 293 (343)
T cd07880 217 KGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRI---TAA 293 (343)
T ss_pred CCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCC---CHH
Confidence 877665555444332111 0112246788999999999999999999 999
Q ss_pred HHHhCCCCCCC
Q 001783 873 EVKQHVFFKDI 883 (1013)
Q Consensus 873 ELLqHPFFk~I 883 (1013)
+++.||||+..
T Consensus 294 ~~l~~~~~~~~ 304 (343)
T cd07880 294 EALAHPYFEEF 304 (343)
T ss_pred HHhcCccHhhh
Confidence 99999999864
No 248
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=9.2e-39 Score=333.68 Aligned_cols=252 Identities=23% Similarity=0.357 Sum_probs=209.5
Q ss_pred cEEEEEeeccCceEEEEEEECCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce----
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTT---GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN---- 663 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~t---gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~---- 663 (1013)
|++.+.||+|+||.||.|....+ +..||+|+++.... .......+.+|+.+++.++||||+++++.+.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 67889999999999999987653 47899999875432 33456788999999999999999999988766543
Q ss_pred --EEEEEEeccCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCC
Q 001783 664 --LYLVMEYLNGGDLYSLLRNL------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1013)
Q Consensus 664 --LyLVMEy~~GGSL~dlL~~~------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1013)
.+++|||+++|+|..++... ..+++..+..++.||+.||.|||++||+||||||+||++++++.+||+|||+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 79999999999999988432 3589999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh
Q 001783 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 736 Ak~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT 815 (1013)
++....... ........++..|+|||++.+..++.++|||||||++|||++
T Consensus 160 ~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~ 210 (273)
T cd05035 160 SKKIYSGDY-----------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 210 (273)
T ss_pred eeecccccc-----------------------------ccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHh
Confidence 874211000 000112345678999999998889999999999999999999
Q ss_pred -CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 816 -GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 816 -Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
|.+||.+....+.+..+.... .+..+..++.++.++|.+||+.||.+|| ++.+++++
T Consensus 211 ~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~e~~~~ 268 (273)
T cd05035 211 RGQTPYPGVENHEIYDYLRHGN--RLKQPEDCLDELYDLMYSCWRADPKDRP---TFTKLREV 268 (273)
T ss_pred CCCCCCCCCCHHHHHHHHHcCC--CCCCCcCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 999999888878777776543 2345678899999999999999999999 89988875
No 249
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.9e-39 Score=341.83 Aligned_cols=255 Identities=20% Similarity=0.344 Sum_probs=215.1
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR 661 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~-----tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~ 661 (1013)
.+.+|++++.||+|+||+||+|.+.. .++.||+|+++... .....+.+.+|..++..++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 80 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE 80 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC
Confidence 34678999999999999999998754 35789999987543 233456788999999999999999999999999
Q ss_pred ceEEEEEEeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD 725 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~dlL~~~----------------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d 725 (1013)
..+++++||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.+
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK 160 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence 9999999999999999998531 347888899999999999999999999999999999999999
Q ss_pred CcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeec
Q 001783 726 GHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWS 805 (1013)
Q Consensus 726 G~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWS 805 (1013)
+.+||+|||+++..... ..........+++.|+|||++.+..++.++||||
T Consensus 161 ~~~kl~Dfg~~~~~~~~-----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s 211 (283)
T cd05091 161 LNVKISDLGLFREVYAA-----------------------------DYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWS 211 (283)
T ss_pred CceEecccccccccccc-----------------------------hheeeccCccCCccccCHHHHhcCCCCcchhHHH
Confidence 99999999998731000 0001122345678999999999888999999999
Q ss_pred hhHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 806 VGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 806 LGVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
|||++|||++ |.+||.+....+.+..+..... +..+..++.++.+|+.+||+.+|.+|| ++.+|++.
T Consensus 212 lG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~RP---~~~~i~~~ 279 (283)
T cd05091 212 YGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQV--LPCPDDCPAWVYTLMLECWNEFPSRRP---RFKDIHSR 279 (283)
T ss_pred HHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHhCCCcccCC---CHHHHHHH
Confidence 9999999998 8999998888888888776553 345678999999999999999999999 89998874
No 250
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.2e-38 Score=338.71 Aligned_cols=258 Identities=24% Similarity=0.394 Sum_probs=215.1
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEECCC-----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEee
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTT-----GDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYS 657 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArdk~t-----gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~ 657 (1013)
+....++|++.+.||+|+||.||++.+... ...+|+|++.... .......+.+|+.++..+ +||||++++++
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 84 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGV 84 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 344557899999999999999999998643 3689999987542 233456788999999999 89999999999
Q ss_pred eeccceEEEEEEeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCcee
Q 001783 658 FTCRENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLL 721 (1013)
Q Consensus 658 fed~~~LyLVMEy~~GGSL~dlL~~~----------------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNIL 721 (1013)
+.....+|++|||+++|+|..++... +.+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 85 ~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil 164 (293)
T cd05053 85 CTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVL 164 (293)
T ss_pred EcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEE
Confidence 99999999999999999999999642 45889999999999999999999999999999999999
Q ss_pred ecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccc
Q 001783 722 IAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTA 801 (1013)
Q Consensus 722 Ld~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ks 801 (1013)
++.++.+||+|||+++...... .........++..|+|||++.+..++.++
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 215 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHID-----------------------------YYRKTTNGRLPVKWMAPEALFDRVYTHQS 215 (293)
T ss_pred EcCCCeEEeCcccccccccccc-----------------------------ceeccCCCCCCccccCHHHhccCCcCccc
Confidence 9999999999999987311000 00001122356789999999999999999
Q ss_pred eeechhHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 802 DWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 802 DIWSLGVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
|||||||++|||++ |..||.+....+.+..+..... +..+..++..+.+|+.+||..||.+|| ++.+++++
T Consensus 216 Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~eil~~ 287 (293)
T cd05053 216 DVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYR--MEKPQNCTQELYHLMRDCWHEVPSQRP---TFKQLVED 287 (293)
T ss_pred ceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcccCcccCc---CHHHHHHH
Confidence 99999999999997 9999998888777776655432 345567889999999999999999999 99999875
No 251
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=363.65 Aligned_cols=257 Identities=32% Similarity=0.590 Sum_probs=227.6
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
+-|.++.+||+|+||.||+|.++++|..+|||.+... ...+.+..|+.|++++++|+||++|+.|.....+++||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVM 107 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVM 107 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeeh
Confidence 3489999999999999999999999999999988753 35678899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|||..|++.++++. ...|++.++..+++..+.||+|||...-||||||..|||++.+|+.||+|||.|-.
T Consensus 108 EYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQ--------- 178 (502)
T KOG0574|consen 108 EYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQ--------- 178 (502)
T ss_pred hhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccch---------
Confidence 99999999999964 47899999999999999999999999999999999999999999999999998852
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
++ ..-.+.++.+|||.|||||++..-+|+..+||||||++..||..|++||..-.+..
T Consensus 179 -----------------LT-----DTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR 236 (502)
T KOG0574|consen 179 -----------------LT-----DTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR 236 (502)
T ss_pred -----------------hh-----hhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc
Confidence 11 11234578899999999999999999999999999999999999999998877765
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCC
Q 001783 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1013)
Q Consensus 828 i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Id 884 (1013)
.+-.|-....+-..-|+.+|.++.|||++||.+.|++|- ||.++++|||.++-.
T Consensus 237 AIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~---TA~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 237 AIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERK---TALRLCEHTFIKNAP 290 (502)
T ss_pred eeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHH---HHHHHhhhhhhcCCC
Confidence 554554444433345678999999999999999999999 999999999998753
No 252
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=9.9e-39 Score=337.93 Aligned_cols=253 Identities=23% Similarity=0.363 Sum_probs=212.0
Q ss_pred CCcEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~-----tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~ 663 (1013)
++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.++|+||+++++++.+...
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 679999999999999999999977 77899999886432 23344678899999999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC---cEEEeec
Q 001783 664 LYLVMEYLNGGDLYSLLRNLG-------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG---HIKLTDF 733 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g-------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG---~VKLiDF 733 (1013)
.|+||||++|++|.+++.+.+ .+++..+..++.||+.||+|||++|++||||||+|||++.++ .+||+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df 163 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF 163 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence 999999999999999997653 489999999999999999999999999999999999998765 5999999
Q ss_pred CCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHH
Q 001783 734 GLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFEL 813 (1013)
Q Consensus 734 GLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYEL 813 (1013)
|+++....... ........+++.|+|||++.+..++.++|||||||++|||
T Consensus 164 g~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el 214 (277)
T cd05036 164 GMARDIYRASY-----------------------------YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEI 214 (277)
T ss_pred ccccccCCccc-----------------------------eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHH
Confidence 99873100000 0001122345689999999988899999999999999999
Q ss_pred Hh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 814 IV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 814 LT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
++ |..||...+..+....+..... +..+..++..+.+|+.+||+.+|.+|| ++.++++|
T Consensus 215 ~~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~cl~~~p~~Rp---s~~~vl~~ 274 (277)
T cd05036 215 FSLGYMPYPGRTNQEVMEFVTGGGR--LDPPKGCPGPVYRIMTDCWQHTPEDRP---NFATILER 274 (277)
T ss_pred HcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCCcccCc---CHHHHHHH
Confidence 97 9999998887777666654322 234667899999999999999999999 99999987
No 253
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.1e-38 Score=338.90 Aligned_cols=256 Identities=26% Similarity=0.381 Sum_probs=212.5
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCC----------------CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCe
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTG----------------DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFV 651 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tg----------------k~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNI 651 (1013)
.++|++++.||+|+||.||+|.+..++ ..||+|++..... ....+.+.+|++++..++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcCCCCE
Confidence 467999999999999999999876544 5689999876432 3456788999999999999999
Q ss_pred eEEEeeeeccceEEEEEEeccCCChHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCce
Q 001783 652 VRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG-----------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNL 720 (1013)
Q Consensus 652 VkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g-----------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNI 720 (1013)
+++++++.....+++||||+++++|.+++.+.. .+++..++.++.||+.||.|||++||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 999999999999999999999999999997765 689999999999999999999999999999999999
Q ss_pred eecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCcc
Q 001783 721 LIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTT 800 (1013)
Q Consensus 721 LLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~k 800 (1013)
+++.++.++|+|||+++...... .........+|+.|+|||++.+..++.+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 212 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSD-----------------------------YYRVQGRAPLPIRWMAWESVLLGKFTTK 212 (296)
T ss_pred eecCCCceEEccccceeecccCc-----------------------------ceeecCcCCCCceecCHHHhhcCCCCcc
Confidence 99999999999999987311000 0011223467889999999998889999
Q ss_pred ceeechhHHHHHHHh--CCCCCCCCChhHHHHhhhcc-----CCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHH
Q 001783 801 ADWWSVGIILFELIV--GIPPFNAEHPQQIFDNILNR-----KIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1013)
Q Consensus 801 sDIWSLGVILYELLT--Gk~PF~g~~~~ei~qkIl~~-----~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeE 873 (1013)
+|||||||++|||++ |..||...+..+++..+... .......+..++.++.+||.+||+.||.+|| ++.+
T Consensus 213 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp---t~~e 289 (296)
T cd05051 213 SDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRP---TFRE 289 (296)
T ss_pred chhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCC---CHHH
Confidence 999999999999998 78899887777766665432 1111223456789999999999999999999 8999
Q ss_pred HHhC
Q 001783 874 VKQH 877 (1013)
Q Consensus 874 LLqH 877 (1013)
|+++
T Consensus 290 l~~~ 293 (296)
T cd05051 290 IHLF 293 (296)
T ss_pred HHHH
Confidence 8653
No 254
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=5.5e-39 Score=339.06 Aligned_cols=254 Identities=31% Similarity=0.539 Sum_probs=210.0
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEe
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy 670 (1013)
|++++.||.|++|.||+|.++.+|..||+|++..... .......+.+|+++++.++||||+++++++.+....|+||||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 6788999999999999999999999999999876432 223345678899999999999999999999999999999999
Q ss_pred ccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 671 LNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 671 ~~GGSL~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
++ ++|.+++.... .+++..+..++.||+.||+|||++|++||||+|+||+++.++.++|+|||+++.....
T Consensus 80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~------ 152 (283)
T cd07835 80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVP------ 152 (283)
T ss_pred cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCC------
Confidence 95 59999997765 6899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
........+++.|+|||++.+. .++.++|||||||++|+|++|++||...+...
T Consensus 153 -------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 207 (283)
T cd07835 153 -------------------------VRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID 207 (283)
T ss_pred -------------------------ccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0011223578899999988764 57889999999999999999999998776544
Q ss_pred HHHhhhccCC--------------------------CCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 828 IFDNILNRKI--------------------------PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 828 i~qkIl~~~~--------------------------~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
...++..... ........++..+.+||.+||+.||.+|| +++++++||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~il~~~~~ 283 (283)
T cd07835 208 QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRI---SAKAALQHPYF 283 (283)
T ss_pred HHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCc---CHHHHhcCCCC
Confidence 4333322100 00112345778999999999999999999 99999999998
No 255
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3.6e-39 Score=352.22 Aligned_cols=263 Identities=29% Similarity=0.462 Sum_probs=213.1
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec----cceE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC----RENL 664 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed----~~~L 664 (1013)
++|++.+.||.|+||.||+|.++.+|+.||+|++..... .......+.+|+.+|+.++||||++++++|.. ...+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 579999999999999999999999999999999876432 22345677889999999999999999988763 3578
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+||||+. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|||+++.......
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 162 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT 162 (334)
T ss_pred EEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence 99999995 59999998778899999999999999999999999999999999999999999999999999874111000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
. ........+|+..|+|||++.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 163 ~---------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~ 215 (334)
T cd07855 163 E---------------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGK 215 (334)
T ss_pred C---------------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCC
Confidence 0 0011123578999999999876 45899999999999999999999999876
Q ss_pred ChhHHHHhhhcc-----------------------C-----CCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHH
Q 001783 824 HPQQIFDNILNR-----------------------K-----IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1013)
Q Consensus 824 ~~~ei~qkIl~~-----------------------~-----~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELL 875 (1013)
+.......+... . .++.......+.++.+||.+||+.+|.+|| ++.+++
T Consensus 216 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~~l 292 (334)
T cd07855 216 NYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERI---TVEQAL 292 (334)
T ss_pred ChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCc---CHHHHH
Confidence 644333222210 0 000111245789999999999999999999 999999
Q ss_pred hCCCCCCC
Q 001783 876 QHVFFKDI 883 (1013)
Q Consensus 876 qHPFFk~I 883 (1013)
+||||...
T Consensus 293 ~~~~~~~~ 300 (334)
T cd07855 293 QHPFLAQY 300 (334)
T ss_pred hChhhhhc
Confidence 99999853
No 256
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.6e-39 Score=375.36 Aligned_cols=267 Identities=24% Similarity=0.352 Sum_probs=200.1
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCC-CEEEEEE--------------eeccccccHHHHHHHHHHHHHHHhcCCCCee
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTG-DLFAIKV--------------LKKADMIRKNAVESILAERDILISVRNPFVV 652 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tg-k~VALKV--------------lkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIV 652 (1013)
+++|++++.||+|+||+||+|..+... ..++.|. +.+...........+.+|+.+|..++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 468999999999999999999765322 2222221 1111111223456788999999999999999
Q ss_pred EEEeeeeccceEEEEEEeccCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCc
Q 001783 653 RFFYSFTCRENLYLVMEYLNGGDLYSLLRNL-----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGH 727 (1013)
Q Consensus 653 kL~e~fed~~~LyLVMEy~~GGSL~dlL~~~-----g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~ 727 (1013)
++++++...+..|+|||++. ++|..++... .......++.++.||+.||+|||++|||||||||+|||++.+|.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence 99999999999999999995 4788777542 22446778889999999999999999999999999999999999
Q ss_pred EEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechh
Q 001783 728 IKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVG 807 (1013)
Q Consensus 728 VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLG 807 (1013)
+||+|||+++..... ........+||+.|+|||++.+..|+.++||||||
T Consensus 306 vkL~DFGla~~~~~~------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 355 (501)
T PHA03210 306 IVLGDFGTAMPFEKE------------------------------REAFDYGWVGTVATNSPEILAGDGYCEITDIWSCG 355 (501)
T ss_pred EEEEeCCCceecCcc------------------------------cccccccccCCcCCCCchhhcCCCCCcHHHHHHHH
Confidence 999999998731000 00112246899999999999999999999999999
Q ss_pred HHHHHHHhCCCC-CCCC--ChhHHHHhhhcc----CCCCCC----------------C---------CCCCCHHHHHHHH
Q 001783 808 IILFELIVGIPP-FNAE--HPQQIFDNILNR----KIPWPR----------------V---------PEEMSPEAHDLID 855 (1013)
Q Consensus 808 VILYELLTGk~P-F~g~--~~~ei~qkIl~~----~~~~p~----------------l---------p~~lS~elkDLI~ 855 (1013)
|++|||++|..+ |... .....+.+++.. ...+|. . ...++.++.++|.
T Consensus 356 vil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 435 (501)
T PHA03210 356 LILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLV 435 (501)
T ss_pred HHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHH
Confidence 999999998754 4322 222222222110 000110 0 0135678889999
Q ss_pred HhccCCcCCcCCCCCHHHHHhCCCCCCCChhhH
Q 001783 856 RFLTEDPHQRLGSGGASEVKQHVFFKDINWDTL 888 (1013)
Q Consensus 856 rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L 888 (1013)
+||++||.+|| +|.|+|+||||.....+.+
T Consensus 436 kmL~~DP~~Rp---sa~elL~hp~f~~~~~~~~ 465 (501)
T PHA03210 436 KMLTFDWHLRP---GAAELLALPLFSAEEEEEI 465 (501)
T ss_pred HHhccCcccCc---CHHHHhhChhhhcCCchHH
Confidence 99999999999 9999999999998766554
No 257
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.1e-38 Score=331.28 Aligned_cols=246 Identities=28% Similarity=0.409 Sum_probs=205.2
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GG 674 (1013)
+.||+|+||.||+|+++.+++.||+|.+.... .......+.+|+.+++.++||||+++++++.....+|+||||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 36899999999999999999999999876432 3445577899999999999999999999999999999999999999
Q ss_pred ChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 675 DLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 675 SL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
+|.+++.+. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.... ... .
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~-~~~-------~- 149 (252)
T cd05084 79 DFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEE-DGV-------Y- 149 (252)
T ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccc-ccc-------c-
Confidence 999999764 468999999999999999999999999999999999999999999999999986310 000 0
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhHHHHhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFDNI 832 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~~ei~qkI 832 (1013)
........++..|+|||.+.+..++.++|||||||++|||++ |.+||...........+
T Consensus 150 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~ 209 (252)
T cd05084 150 --------------------ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAI 209 (252)
T ss_pred --------------------cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHH
Confidence 000001123567999999998889999999999999999997 99999877766665555
Q ss_pred hccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 833 LNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 833 l~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
..... +..+..++..+.+|+.+||+.+|.+|| ++.++++
T Consensus 210 ~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~~~~ 248 (252)
T cd05084 210 EQGVR--LPCPELCPDAVYRLMERCWEYDPGQRP---SFSTVHQ 248 (252)
T ss_pred HcCCC--CCCcccCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 44322 234567899999999999999999999 8888864
No 258
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.6e-38 Score=334.25 Aligned_cols=253 Identities=33% Similarity=0.540 Sum_probs=208.6
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc---CCCCeeEEEeeeeccce----
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV---RNPFVVRFFYSFTCREN---- 663 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L---~HPNIVkL~e~fed~~~---- 663 (1013)
|++.+.||.|+||.||+|+++.+++.||+|+++.... .......+.+|+.++..+ +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 7899999999999999999998999999999975432 222234566787777665 69999999999988776
Q ss_pred -EEEEEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccc
Q 001783 664 -LYLVMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1013)
Q Consensus 664 -LyLVMEy~~GGSL~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1013)
+|++|||+.+ +|.+++.+.. .+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++....
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 9999999975 8999887643 58999999999999999999999999999999999999999999999999986310
Q ss_pred cCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001783 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 741 ~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
.. .......|++.|+|||++.+..++.++|||||||++|+|++|.+||
T Consensus 159 ~~--------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~ 206 (287)
T cd07838 159 FE--------------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLF 206 (287)
T ss_pred CC--------------------------------cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcc
Confidence 00 0111235788999999999998999999999999999999999999
Q ss_pred CCCChhHHHHhhhccCC-----CC-----------C--------CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 821 NAEHPQQIFDNILNRKI-----PW-----------P--------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~-----~~-----------p--------~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.+.+..+.+.++..... .+ + .....++..+.+||.+||+.||.+|| +++++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---~~~~il~ 283 (287)
T cd07838 207 RGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRI---SAFEALQ 283 (287)
T ss_pred cCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCC---CHHHHhc
Confidence 98887776666643110 00 0 01124568889999999999999999 9999999
Q ss_pred CCCC
Q 001783 877 HVFF 880 (1013)
Q Consensus 877 HPFF 880 (1013)
||||
T Consensus 284 ~~~~ 287 (287)
T cd07838 284 HPYF 287 (287)
T ss_pred CcCC
Confidence 9998
No 259
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=6.1e-39 Score=351.39 Aligned_cols=259 Identities=30% Similarity=0.461 Sum_probs=212.1
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc-----ce
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR-----EN 663 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~-----~~ 663 (1013)
.+|++++.||+|+||+||+|++..+++.||||.+..... .......+.+|+.+++.++||||+++++++... ..
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 569999999999999999999999999999999875432 223345677899999999999999999887654 35
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
+|+||||+. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~-- 160 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE-- 160 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC--
Confidence 899999996 69999998888899999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
. ........||..|+|||++.+ ..++.++|||||||++|+|++|++||.+
T Consensus 161 ~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 211 (337)
T cd07858 161 K-----------------------------GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPG 211 (337)
T ss_pred C-----------------------------cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCC
Confidence 0 001123468899999999875 4689999999999999999999999987
Q ss_pred CChhHHHHhhhcc----------------------------CCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHH
Q 001783 823 EHPQQIFDNILNR----------------------------KIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1013)
Q Consensus 823 ~~~~ei~qkIl~~----------------------------~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeEL 874 (1013)
.+....+..+... ...+......+++++.+||++||+.||.+|| +++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---s~~el 288 (337)
T cd07858 212 KDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRI---TVEEA 288 (337)
T ss_pred CChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhcc---CHHHH
Confidence 6543333222210 0001112346889999999999999999999 99999
Q ss_pred HhCCCCCCC
Q 001783 875 KQHVFFKDI 883 (1013)
Q Consensus 875 LqHPFFk~I 883 (1013)
++||||..+
T Consensus 289 l~h~~~~~~ 297 (337)
T cd07858 289 LAHPYLASL 297 (337)
T ss_pred HcCcchhhh
Confidence 999999754
No 260
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.3e-38 Score=344.73 Aligned_cols=254 Identities=25% Similarity=0.372 Sum_probs=209.1
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCE----EEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDL----FAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~----VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~ 662 (1013)
...+|++++.||+|+||+||+|++..++.. ||+|+++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~- 81 (316)
T cd05108 5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTS- 81 (316)
T ss_pred chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-
Confidence 346799999999999999999998766654 8999986432 234456788999999999999999999988764
Q ss_pred eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 663 NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
..++|+||+++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 82 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccC
Confidence 578999999999999999764 4689999999999999999999999999999999999999999999999999974110
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPF 820 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF 820 (1013)
... ........++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 162 ~~~-----------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~ 212 (316)
T cd05108 162 DEK-----------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 212 (316)
T ss_pred CCc-----------------------------ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence 000 000112345678999999999999999999999999999997 99999
Q ss_pred CCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.+....+.... ......++ .+..++.++.++|.+||..||.+|| ++.+++.+
T Consensus 213 ~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rp---s~~~l~~~ 264 (316)
T cd05108 213 DGIPASEISSI-LEKGERLP-QPPICTIDVYMIMVKCWMIDADSRP---KFRELIIE 264 (316)
T ss_pred CCCCHHHHHHH-HhCCCCCC-CCCCCCHHHHHHHHHHccCChhhCc---CHHHHHHH
Confidence 88776655443 33333323 3556889999999999999999999 89999986
No 261
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.4e-38 Score=331.90 Aligned_cols=254 Identities=23% Similarity=0.323 Sum_probs=213.7
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTT---GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~t---gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
.++|++.+.||+|+||+||+|+++.+ ...||+|+++... .......+.+|+.+++.++||||+++++.+...+..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 36799999999999999999998654 4589999987543 234456788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
|+||||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++... ..
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~-~~ 159 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLE-DS 159 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccc-cc
Confidence 9999999999999999764 578999999999999999999999999999999999999999999999999987411 00
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g 822 (1013)
.. ........+++.|+|||.+.+..++.++|||||||++|+|++ |..||..
T Consensus 160 ~~----------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~ 211 (266)
T cd05033 160 EA----------------------------TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWD 211 (266)
T ss_pred cc----------------------------ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCC
Confidence 00 000112345678999999998889999999999999999998 9999988
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
....+....+..... +..+..++..+.+|+.+||+.+|.+|| ++.+++++
T Consensus 212 ~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp---~~~ei~~~ 261 (266)
T cd05033 212 MSNQDVIKAVEDGYR--LPPPMDCPSALYQLMLDCWQKDRNERP---TFSQIVST 261 (266)
T ss_pred CCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCcccCc---CHHHHHHH
Confidence 777777776654322 223567899999999999999999999 89998875
No 262
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.4e-39 Score=348.83 Aligned_cols=261 Identities=30% Similarity=0.468 Sum_probs=219.0
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc-----eE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE-----NL 664 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~-----~L 664 (1013)
+|++.+.||.|+||.||+|++..+++.||+|++.+.. ......+.+.+|+.+++.++||||+++++++.... .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 5899999999999999999999999999999987643 12344567889999999999999999999988775 79
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+||||+.+ +|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++........
T Consensus 80 ~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~ 158 (330)
T cd07834 80 YIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED 158 (330)
T ss_pred EEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence 999999974 8999998877899999999999999999999999999999999999999999999999999874110000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
.........||+.|+|||++.+. .++.++|+|||||++|+|++|.+||.+.
T Consensus 159 ----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~ 210 (330)
T cd07834 159 ----------------------------EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGR 210 (330)
T ss_pred ----------------------------ccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCC
Confidence 00112235689999999999887 7899999999999999999999999988
Q ss_pred ChhHHHHhhhccCCC----------------------------CCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHH
Q 001783 824 HPQQIFDNILNRKIP----------------------------WPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~----------------------------~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELL 875 (1013)
+..+.+..+...... +......++.++.+||.+||+++|.+|| ++++++
T Consensus 211 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~ll 287 (330)
T cd07834 211 DYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRI---TADEAL 287 (330)
T ss_pred CHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCC---CHHHHH
Confidence 877666665542111 0111234788999999999999999999 999999
Q ss_pred hCCCCCCC
Q 001783 876 QHVFFKDI 883 (1013)
Q Consensus 876 qHPFFk~I 883 (1013)
+||||+++
T Consensus 288 ~~~~~~~~ 295 (330)
T cd07834 288 AHPYLAQL 295 (330)
T ss_pred hCccHHhh
Confidence 99999864
No 263
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.4e-38 Score=330.06 Aligned_cols=246 Identities=27% Similarity=0.478 Sum_probs=208.2
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeee-eccce
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSF-TCREN 663 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~f-ed~~~ 663 (1013)
....++|++.+.||+|+||.||++... |..||+|.++... ..+.+.+|+.+++.++|+||+++++++ .....
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd05082 2 ALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 74 (256)
T ss_pred CccHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc-----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCc
Confidence 345678999999999999999999764 7889999986432 245788999999999999999999875 45567
Q ss_pred EEEEEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 664 LYLVMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
.|+||||+++++|.+++.+.+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 999999999999999997643 488999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPF 820 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF 820 (1013)
......++..|+|||++.+..++.++|||||||++|+|++ |++||
T Consensus 155 ----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~ 200 (256)
T cd05082 155 ----------------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200 (256)
T ss_pred ----------------------------------cCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence 0012234567999999999889999999999999999997 99999
Q ss_pred CCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
...+..+....+..... +..+..+++.+.+||.+||+.+|.+|| ++.++++
T Consensus 201 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~l~~ 251 (256)
T cd05082 201 PRIPLKDVVPRVEKGYK--MDAPDGCPPVVYDVMKQCWHLDAATRP---SFLQLRE 251 (256)
T ss_pred CCCCHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHhcCChhhCc---CHHHHHH
Confidence 98887777776654422 344567899999999999999999999 8888875
No 264
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=8.2e-39 Score=351.52 Aligned_cols=256 Identities=30% Similarity=0.484 Sum_probs=209.7
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc------
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE------ 662 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~------ 662 (1013)
++|.+.+.||+|+||.||+|+++.+|+.||+|++.+... .......+.+|+.+++.++||||++++++|....
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 679999999999999999999999999999999876432 2233456789999999999999999999887543
Q ss_pred eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 663 NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
.+|+||||+.+ +|..++. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~-- 168 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD-- 168 (342)
T ss_pred eEEEEeccccc-CHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC--
Confidence 46999999964 7776652 468999999999999999999999999999999999999999999999999987310
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 169 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~ 216 (342)
T cd07879 169 --------------------------------AEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFK 216 (342)
T ss_pred --------------------------------CCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCC
Confidence 00123467889999999876 458899999999999999999999999
Q ss_pred CCChhHHHHhhhccCC----------------------------CCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHH
Q 001783 822 AEHPQQIFDNILNRKI----------------------------PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~----------------------------~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeE 873 (1013)
+.+....+..+..... .+.......+.++.+||.+||+.||.+|| ++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~---~~~e 293 (342)
T cd07879 217 GKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRL---TATE 293 (342)
T ss_pred CCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCc---CHHH
Confidence 8776555444332100 00011134678899999999999999999 9999
Q ss_pred HHhCCCCCCCCh
Q 001783 874 VKQHVFFKDINW 885 (1013)
Q Consensus 874 LLqHPFFk~Idw 885 (1013)
++.||||..+..
T Consensus 294 ~l~h~~f~~~~~ 305 (342)
T cd07879 294 ALEHPYFDSFRD 305 (342)
T ss_pred HhcCcchhhccc
Confidence 999999987643
No 265
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.4e-38 Score=339.31 Aligned_cols=250 Identities=24% Similarity=0.400 Sum_probs=210.2
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCC--EEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGD--LFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk--~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~Ly 665 (1013)
++|++.+.||+|+||.||+|.++.++. .+++|.++.. ......+.+.+|+.++.++ +||||+++++++.....+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 679999999999999999999887765 4688887632 2334456788999999999 7999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEE
Q 001783 666 LVMEYLNGGDLYSLLRNLG----------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIK 729 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~g----------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VK 729 (1013)
+||||+++|+|.+++.+.+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999996532 488899999999999999999999999999999999999999999
Q ss_pred EeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHH
Q 001783 730 LTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGII 809 (1013)
Q Consensus 730 LiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVI 809 (1013)
|+|||++..... ........++..|+|||++.+..++.++|||||||+
T Consensus 160 l~dfg~~~~~~~--------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~i 207 (297)
T cd05089 160 IADFGLSRGEEV--------------------------------YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVL 207 (297)
T ss_pred ECCcCCCccccc--------------------------------eeccCCCCcCccccCchhhccCCCCchhhHHHHHHH
Confidence 999999862000 000011223557999999999889999999999999
Q ss_pred HHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 810 LFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 810 LYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
+|||++ |.+||......+.+..+..... +..+..++..+.+||.+||..+|.+|| +++++++.
T Consensus 208 l~el~t~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~~ 271 (297)
T cd05089 208 LWEIVSLGGTPYCGMTCAELYEKLPQGYR--MEKPRNCDDEVYELMRQCWRDRPYERP---PFAQISVQ 271 (297)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 999997 9999998888887777765422 334567899999999999999999999 89998765
No 266
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.9e-38 Score=338.12 Aligned_cols=268 Identities=29% Similarity=0.468 Sum_probs=209.6
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc------
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------ 661 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~------ 661 (1013)
+++|++.+.||.|+||.||+|.++.+++.||+|++...... ......+.+|+.+++.++||||+++++.+.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK-DGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC-CCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 58899999999999999999999999999999998654321 11224567899999999999999999877543
Q ss_pred --ceEEEEEEeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 662 --ENLYLVMEYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 662 --~~LyLVMEy~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
..+|+||||+.+ +|...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 164 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARP 164 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchh
Confidence 357999999975 77777754 35799999999999999999999999999999999999999999999999999874
Q ss_pred cccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCC
Q 001783 739 GLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGI 817 (1013)
Q Consensus 739 ~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk 817 (1013)
.......... .............||+.|+|||++.+. .++.++|||||||++|+|++|+
T Consensus 165 ~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~ 224 (311)
T cd07866 165 YDGPPPNPKG--------------------GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRR 224 (311)
T ss_pred ccCCCccccc--------------------CCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCC
Confidence 2111000000 000011122346789999999998764 5789999999999999999999
Q ss_pred CCCCCCChhHHHHhhhccCCC--------------------CCCC-------CCCCCHHHHHHHHHhccCCcCCcCCCCC
Q 001783 818 PPFNAEHPQQIFDNILNRKIP--------------------WPRV-------PEEMSPEAHDLIDRFLTEDPHQRLGSGG 870 (1013)
Q Consensus 818 ~PF~g~~~~ei~qkIl~~~~~--------------------~p~l-------p~~lS~elkDLI~rMLqkDPekRPg~~T 870 (1013)
+||.+.+.....+.+...... .... ...+++.+.+||.+||+.||.+|| +
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---t 301 (311)
T cd07866 225 PILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRL---T 301 (311)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCc---C
Confidence 999887776655554331100 0000 123457889999999999999999 9
Q ss_pred HHHHHhCCCC
Q 001783 871 ASEVKQHVFF 880 (1013)
Q Consensus 871 AeELLqHPFF 880 (1013)
+.+++.||||
T Consensus 302 ~~ell~~~~f 311 (311)
T cd07866 302 ASDALEHPYF 311 (311)
T ss_pred HHHHhcCCCC
Confidence 9999999998
No 267
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.1e-38 Score=331.33 Aligned_cols=246 Identities=25% Similarity=0.388 Sum_probs=205.1
Q ss_pred EeeccCceEEEEEEE--CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 596 PISRGAFGRVFLAKK--RTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 596 ~LGkG~FGtVyLArd--k~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
.||+|+||.||+|.+ +.++..+|+|+++... ......+.+.+|+.+++.++||||+++++.+. .+..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 589999999999965 4677899999987543 23445678899999999999999999998875 4567999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 674 GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
|+|.+++...+.+++..+..++.||+.||+|||++||+||||||.|||++.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~--------- 150 (257)
T cd05116 80 GPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADEN--------- 150 (257)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCC---------
Confidence 99999998878899999999999999999999999999999999999999999999999999873100000
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhHHHHhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFDNI 832 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~~ei~qkI 832 (1013)
.........+++.|+|||++.+..++.++|||||||++|||++ |.+||...+..++...+
T Consensus 151 -------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i 211 (257)
T cd05116 151 -------------------YYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMI 211 (257)
T ss_pred -------------------eeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 0000112345688999999988889999999999999999998 99999988887777777
Q ss_pred hccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 833 LNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 833 l~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
..... +..+..+++++.+||.+||+.||.+|| ++++|..
T Consensus 212 ~~~~~--~~~~~~~~~~l~~li~~~~~~~p~~Rp---~~~~i~~ 250 (257)
T cd05116 212 ESGER--MECPQRCPPEMYDLMKLCWTYGVDERP---GFAVVEL 250 (257)
T ss_pred HCCCC--CCCCCCCCHHHHHHHHHHhccCchhCc---CHHHHHH
Confidence 65432 446678999999999999999999999 6666543
No 268
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5.8e-39 Score=349.79 Aligned_cols=260 Identities=25% Similarity=0.401 Sum_probs=205.5
Q ss_pred Eeecc--CceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 596 PISRG--AFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 596 ~LGkG--~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
.||.| +||+||+|++..+|+.||+|++...... ....+.+.+|+.+++.++||||++++++|...+.+|+||||+.+
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT-EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 45666 9999999999999999999998765432 34457888999999999999999999999999999999999999
Q ss_pred CChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCC
Q 001783 674 GDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPA 751 (1013)
Q Consensus 674 GSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~ 751 (1013)
++|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.++++|||.+........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~------- 156 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ------- 156 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc-------
Confidence 9999999764 3589999999999999999999999999999999999999999999999986542100000
Q ss_pred ccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC--CCCccceeechhHHHHHHHhCCCCCCCCChhHHH
Q 001783 752 VSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT--GHGTTADWWSVGIILFELIVGIPPFNAEHPQQIF 829 (1013)
Q Consensus 752 ~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~--~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~ 829 (1013)
..... ........++..|||||++.+. .++.++|||||||++|+|++|.+||.........
T Consensus 157 -~~~~~----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~ 219 (328)
T cd08226 157 -KAKVV----------------YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQML 219 (328)
T ss_pred -ccccc----------------ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHH
Confidence 00000 0001123456789999999763 4789999999999999999999999876654444
Q ss_pred HhhhccCCCCC--------------------------------------------CCCCCCCHHHHHHHHHhccCCcCCc
Q 001783 830 DNILNRKIPWP--------------------------------------------RVPEEMSPEAHDLIDRFLTEDPHQR 865 (1013)
Q Consensus 830 qkIl~~~~~~p--------------------------------------------~lp~~lS~elkDLI~rMLqkDPekR 865 (1013)
..++......+ ..+..++..+.+||++||+.||.+|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R 299 (328)
T cd08226 220 LQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKR 299 (328)
T ss_pred HHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccC
Confidence 33332211000 0122356789999999999999999
Q ss_pred CCCCCHHHHHhCCCCCCC
Q 001783 866 LGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 866 Pg~~TAeELLqHPFFk~I 883 (1013)
| |+.++++||||+++
T Consensus 300 p---ta~e~l~~~~~~~~ 314 (328)
T cd08226 300 P---SASSLLSHAFFKQV 314 (328)
T ss_pred C---CHHHHhhCHHHHHH
Confidence 9 99999999999754
No 269
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=3.1e-38 Score=333.90 Aligned_cols=252 Identities=24% Similarity=0.378 Sum_probs=208.5
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCC----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGD----LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk----~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~ 663 (1013)
.++|++++.||.|+||+||+|++..++. .||+|+++... .......+.+|+.++..++||||+++++.+... .
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~ 82 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-T 82 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-C
Confidence 4679999999999999999999877776 48999986542 233456788999999999999999999988754 5
Q ss_pred EEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 664 LYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
.+++|||+++|+|.+++... +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 78999999999999999764 56999999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFN 821 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~ 821 (1013)
.. ........+++.|+|||++.+..++.++|||||||++|||++ |.+||.
T Consensus 163 ~~-----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 213 (279)
T cd05109 163 ET-----------------------------EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYD 213 (279)
T ss_pred cc-----------------------------eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 00 000112245678999999999899999999999999999998 999998
Q ss_pred CCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
..........+..... +..+..++.++.++|.+||..||.+|| ++.+++.
T Consensus 214 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rp---~~~~l~~ 263 (279)
T cd05109 214 GIPAREIPDLLEKGER--LPQPPICTIDVYMIMVKCWMIDSECRP---RFRELVD 263 (279)
T ss_pred CCCHHHHHHHHHCCCc--CCCCccCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 7776666555444322 233567899999999999999999999 8999885
No 270
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.2e-38 Score=351.26 Aligned_cols=259 Identities=27% Similarity=0.416 Sum_probs=209.9
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEEC-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEee
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKKR-----TTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYS 657 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArdk-----~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~ 657 (1013)
|...-++|++.+.||.|+||.||+|++. .+++.||+|+++... .......+..|+.++.++ +||||++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeee
Confidence 3444568999999999999999999754 345789999987543 233456778899999999 89999999998
Q ss_pred eecc-ceEEEEEEeccCCChHHHHHhc-----------------------------------------------------
Q 001783 658 FTCR-ENLYLVMEYLNGGDLYSLLRNL----------------------------------------------------- 683 (1013)
Q Consensus 658 fed~-~~LyLVMEy~~GGSL~dlL~~~----------------------------------------------------- 683 (1013)
+... ..+|++|||+++++|.+++...
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 7654 5789999999999999998542
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCc
Q 001783 684 --------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGT 755 (1013)
Q Consensus 684 --------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gt 755 (1013)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++......
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~------------ 227 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP------------ 227 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCc------------
Confidence 257889999999999999999999999999999999999999999999999987411000
Q ss_pred ccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhHHHHhhhc
Q 001783 756 TLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILN 834 (1013)
Q Consensus 756 tl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~~ei~qkIl~ 834 (1013)
.........++..|||||++.+..++.++|||||||++|||++ |..||.+....+.+...+.
T Consensus 228 -----------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~ 290 (337)
T cd05054 228 -----------------DYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLK 290 (337)
T ss_pred -----------------chhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHh
Confidence 0001123456788999999999999999999999999999998 9999987655444444443
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 835 RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 835 ~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
... .+..+...++++.+++.+||+.+|++|| +++++++|
T Consensus 291 ~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~RP---s~~ell~~ 329 (337)
T cd05054 291 EGT-RMRAPEYATPEIYSIMLDCWHNNPEDRP---TFSELVEI 329 (337)
T ss_pred ccC-CCCCCccCCHHHHHHHHHHccCChhhCc---CHHHHHHH
Confidence 332 2334567889999999999999999999 99999886
No 271
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.5e-38 Score=331.61 Aligned_cols=252 Identities=22% Similarity=0.351 Sum_probs=206.8
Q ss_pred cEEEEEeeccCceEEEEEEECCCCC--EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc------c
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGD--LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------E 662 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk--~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~------~ 662 (1013)
|.+.+.||+|+||.||+|++..++. .||+|.++... ......+.+.+|..+++.++||||+++++.+... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3467889999999999999987775 69999987643 2344567889999999999999999999876432 2
Q ss_pred eEEEEEEeccCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCc
Q 001783 663 NLYLVMEYLNGGDLYSLLRNL------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1013)
..+++|||+.+|+|..++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 578999999999999887421 34889999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-
Q 001783 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV- 815 (1013)
Q Consensus 737 k~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT- 815 (1013)
+....... ........+++.|+|||++.+..++.++|||||||++|||++
T Consensus 160 ~~~~~~~~-----------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~ 210 (272)
T cd05075 160 KKIYNGDY-----------------------------YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATR 210 (272)
T ss_pred cccCcccc-----------------------------eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcC
Confidence 74110000 000112356778999999999999999999999999999999
Q ss_pred CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 816 GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 816 Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
|.+||.+....+.+..+..... +..+..++..+.++|.+||+.||.+|| ++.+|+++
T Consensus 211 g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~l~~~ 267 (272)
T cd05075 211 GQTPYPGVENSEIYDYLRQGNR--LKQPPDCLDGLYSLMSSCWLLNPKDRP---SFETLRCE 267 (272)
T ss_pred CCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCcccCc---CHHHHHHH
Confidence 8999988887777777765433 234567889999999999999999999 89998864
No 272
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.7e-38 Score=340.45 Aligned_cols=255 Identities=23% Similarity=0.382 Sum_probs=211.5
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECC-------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeee
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRT-------TGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSF 658 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~-------tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~f 658 (1013)
..++|.+.+.||+|+||.||+|++.. +...+|+|+++... .......+.+|+.++..+ +||||+++++++
T Consensus 16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (307)
T cd05098 16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 93 (307)
T ss_pred ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 34779999999999999999998743 23579999987542 233456788899999999 799999999999
Q ss_pred eccceEEEEEEeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceee
Q 001783 659 TCRENLYLVMEYLNGGDLYSLLRNLG----------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLI 722 (1013)
Q Consensus 659 ed~~~LyLVMEy~~GGSL~dlL~~~g----------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILL 722 (1013)
.....+|+||||+++|+|.+++...+ .++...+..++.||+.||+|||++|++||||||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 173 (307)
T cd05098 94 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 173 (307)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE
Confidence 99999999999999999999997542 47888999999999999999999999999999999999
Q ss_pred cCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccce
Q 001783 723 AHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTAD 802 (1013)
Q Consensus 723 d~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksD 802 (1013)
+.++.+||+|||+++...... .........+++.|+|||++.+..++.++|
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 224 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHID-----------------------------YYKKTTNGRLPVKWMAPEALFDRIYTHQSD 224 (307)
T ss_pred cCCCcEEECCCcccccccccc-----------------------------hhhccccCCCccceeChHHhccCCCCcHHH
Confidence 999999999999987310000 000011223557899999999988999999
Q ss_pred eechhHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 803 WWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 803 IWSLGVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
||||||++|||++ |..||.+....++...+.... .+..+..++.++.+||.+||..+|.+|| ++.+++++
T Consensus 225 vwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~evl~~ 295 (307)
T cd05098 225 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH--RMDKPSNCTNELYMMMRDCWHAVPSQRP---TFKQLVED 295 (307)
T ss_pred HHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCC--CCCCCCcCCHHHHHHHHHHcccChhhCc---CHHHHHHH
Confidence 9999999999998 899998887777776665433 2345667899999999999999999999 89988875
No 273
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=365.90 Aligned_cols=261 Identities=35% Similarity=0.627 Sum_probs=227.0
Q ss_pred cEEE--EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 591 FEII--KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 591 YeIl--k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
|+|. ++||.|.||+||-|+++.+|+.||||++.|.+..... ...+.+|+.||+.+.||.||.+--.|++.+.+++||
T Consensus 564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVM 642 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVM 642 (888)
T ss_pred HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEe
Confidence 6664 7899999999999999999999999999987765443 478999999999999999999999999999999999
Q ss_pred EeccCCChHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC---cEEEeecCCccccccCC
Q 001783 669 EYLNGGDLYSLLR--NLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG---HIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 669 Ey~~GGSL~dlL~--~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG---~VKLiDFGLAk~~~~~s 743 (1013)
|-+.| ++..+|. ..++|++...++++.||+.||.|||-+||+|+||||+|||+.... ++||||||+|++.
T Consensus 643 EKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiI---- 717 (888)
T KOG4236|consen 643 EKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARII---- 717 (888)
T ss_pred hhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeec----
Confidence 99966 7777663 458999999999999999999999999999999999999997654 6999999999952
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
.....+++.+|||.|+|||++.+++|+..-|+||+|||+|--|.|..||..+
T Consensus 718 ----------------------------gEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 718 ----------------------------GEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred ----------------------------chhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 0123356789999999999999999999999999999999999999999753
Q ss_pred ChhHHHHhhhccCCCCCC-CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCC-hhhHhh
Q 001783 824 HPQQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN-WDTLAR 890 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~~p~-lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Id-w~~L~~ 890 (1013)
+++-.+|.+...-+|. -+.++++++.|||..+|+..-.+|. +.+..|.|||+++.. |..|+.
T Consensus 770 --EdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRy---svdk~lsh~Wlq~yq~w~DLRe 833 (888)
T KOG4236|consen 770 --EDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRY---SVDKSLSHPWLQDYQTWLDLRE 833 (888)
T ss_pred --cchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhc---chHhhccchhhhcchHHHHHHH
Confidence 3455666666555553 3468999999999999999999999 999999999999864 766654
No 274
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3e-38 Score=331.13 Aligned_cols=250 Identities=22% Similarity=0.377 Sum_probs=211.4
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.++|++++.||+|+||+||+|.+.. +..+|+|.+..... ....+.+|+.++..++||||+++++++.....+|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEE
Confidence 4679999999999999999998754 45699998875432 235688999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|||+.+|+|.+++... ..+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||+++......
T Consensus 78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~--- 154 (256)
T cd05113 78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE--- 154 (256)
T ss_pred EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCc---
Confidence 9999999999999764 468999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~ 825 (1013)
........++..|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus 155 ---------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~ 207 (256)
T cd05113 155 ---------------------------YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN 207 (256)
T ss_pred ---------------------------eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH
Confidence 000112245678999999998889999999999999999998 9999988887
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.+....+...... ..+...+..+.+++.+||..||.+|| ++.+|+.+
T Consensus 208 ~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~~ll~~ 254 (256)
T cd05113 208 SETVEKVSQGLRL--YRPHLASEKVYAIMYSCWHEKAEERP---TFQQLLSS 254 (256)
T ss_pred HHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcCCCcccCC---CHHHHHHh
Confidence 7777777665432 23456789999999999999999999 99999875
No 275
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.1e-38 Score=331.11 Aligned_cols=250 Identities=23% Similarity=0.412 Sum_probs=209.8
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
..+|++.+.||+|+||.||+|+++ ++..+|+|++.+... ....+.+|+.+++.++||||+++++++......|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 357999999999999999999886 567899999875432 124577899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|||++|++|.+++... +.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~--- 154 (256)
T cd05059 78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ--- 154 (256)
T ss_pred EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccc---
Confidence 9999999999999764 568999999999999999999999999999999999999999999999999987310000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~ 825 (1013)
........++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+.
T Consensus 155 ---------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 207 (256)
T cd05059 155 ---------------------------YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN 207 (256)
T ss_pred ---------------------------ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH
Confidence 000011234567999999999899999999999999999999 8999988777
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.+....+..... +..+...+.++.+|+.+||..+|.+|| ++.++++.
T Consensus 208 ~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp---t~~~~l~~ 254 (256)
T cd05059 208 SEVVESVSAGYR--LYRPKLAPTEVYTIMYSCWHEKPEDRP---AFKKLLSQ 254 (256)
T ss_pred HHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHhcCChhhCc---CHHHHHHH
Confidence 777766654322 234556899999999999999999999 99999874
No 276
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.4e-38 Score=331.57 Aligned_cols=248 Identities=23% Similarity=0.392 Sum_probs=213.1
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
.+|++++.||.|+||.||+|.+.. +..+|+|++..... .....+.+|+.+++.++||||+++++++......|+||
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL---LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch---hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence 579999999999999999999977 88999999876532 23456888999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 669 EYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++..... .
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~----~ 157 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKE----D 157 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCC----c
Confidence 999999999999753 4589999999999999999999999999999999999999999999999999863100 0
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~ 825 (1013)
........++..|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus 158 ---------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~ 210 (261)
T cd05148 158 ---------------------------VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN 210 (261)
T ss_pred ---------------------------cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 000112346778999999998889999999999999999998 8999998888
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.+++..+..... +..+..+++.+.++|.+||+.||.+|| ++.+|++
T Consensus 211 ~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rp---t~~~l~~ 256 (261)
T cd05148 211 HEVYDQITAGYR--MPCPAKCPQEIYKIMLECWAAEPEDRP---SFKALRE 256 (261)
T ss_pred HHHHHHHHhCCc--CCCCCCCCHHHHHHHHHHcCCCchhCc---CHHHHHH
Confidence 888887775422 234567899999999999999999999 8888775
No 277
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=6.5e-38 Score=326.23 Aligned_cols=245 Identities=28% Similarity=0.464 Sum_probs=211.5
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
..++|++.+.||.|+||.||+|... |+.||+|.++.... ..+.+.+|+.+++.++|+||+++++.+.+....|+
T Consensus 4 ~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 77 (256)
T cd05039 4 NSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYI 77 (256)
T ss_pred ChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEE
Confidence 4578999999999999999999874 78999999876432 45778999999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 667 VMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~--- 154 (256)
T cd05039 78 VTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQ--- 154 (256)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccc---
Confidence 999999999999997765 699999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAE 823 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~ 823 (1013)
......++..|+|||++.+..++.++|||||||++|+|++ |..||...
T Consensus 155 -------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 203 (256)
T cd05039 155 -------------------------------GQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 203 (256)
T ss_pred -------------------------------ccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 0011234567999999988889999999999999999997 99999888
Q ss_pred ChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
+..+....+..... +..+..+++.+.+||.+||..+|.+|| ++.++++
T Consensus 204 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~ 251 (256)
T cd05039 204 PLKDVVPHVEKGYR--MEAPEGCPPEVYKVMKDCWELDPAKRP---TFKQLRE 251 (256)
T ss_pred CHHHHHHHHhcCCC--CCCccCCCHHHHHHHHHHhccChhhCc---CHHHHHH
Confidence 87777666554322 244567899999999999999999999 8888876
No 278
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=7.6e-38 Score=339.41 Aligned_cols=255 Identities=27% Similarity=0.433 Sum_probs=216.0
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
-|...+.||+|+||+||+|++..++..||+|++.............+.+|+.+++.++|||++++++++.+....|+|||
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 37778899999999999999999999999999976544445556778899999999999999999999999999999999
Q ss_pred eccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 670 YLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 670 y~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
|+.| +|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 102 ~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~--------- 171 (313)
T cd06633 102 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKS--------- 171 (313)
T ss_pred cCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCccc---------
Confidence 9964 78777755 456899999999999999999999999999999999999999999999999987520
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc---cCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL---GTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~---g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
.......|+..|+|||++. +..++.++|||||||++|+|++|.+||...+.
T Consensus 172 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~ 225 (313)
T cd06633 172 --------------------------SPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 225 (313)
T ss_pred --------------------------CCCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 0012356889999999985 35578899999999999999999999988776
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCC
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Id 884 (1013)
......+.....+. .....++..+.+||.+||+++|.+|| ++.++++||||...+
T Consensus 226 ~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~P~~Rp---~~~~~l~~~~~~~~~ 280 (313)
T cd06633 226 MSALYHIAQNDSPT-LQSNEWTDSFRGFVDYCLQKIPQERP---ASAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHHHHhcCCCC-CCccccCHHHHHHHHHHccCChhhCc---CHHHHhcCcccCCCc
Confidence 55555554433221 12345778899999999999999999 999999999998654
No 279
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.1e-38 Score=328.58 Aligned_cols=250 Identities=24% Similarity=0.387 Sum_probs=210.0
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
..++|++.+.||.|+||.||+|.+. +++.||+|.++.... ..+.+.+|+.+++.++||||+++++++...+.+|+
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 78 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYI 78 (261)
T ss_pred chhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeee
Confidence 3467999999999999999999975 457899999876432 23567889999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 667 VMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
||||++|++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++......
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 157 (261)
T cd05068 79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI- 157 (261)
T ss_pred eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc-
Confidence 999999999999997653 68999999999999999999999999999999999999999999999999987411000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAE 823 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~ 823 (1013)
........++..|+|||++.+..++.++|+|||||++|||++ |+.||.+.
T Consensus 158 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 208 (261)
T cd05068 158 -----------------------------YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGM 208 (261)
T ss_pred -----------------------------ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 000011223467999999999889999999999999999999 99999988
Q ss_pred ChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
+....+..+.... .. ..+..++..+.+++.+||+.+|.+|| ++.+|++
T Consensus 209 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~l~~~P~~Rp---~~~~l~~ 256 (261)
T cd05068 209 TNAEVLQQVDQGY-RM-PCPPGCPKELYDIMLDCWKEDPDDRP---TFETLQW 256 (261)
T ss_pred CHHHHHHHHHcCC-CC-CCCCcCCHHHHHHHHHHhhcCcccCC---CHHHHHH
Confidence 8877777765442 22 24567889999999999999999999 8887764
No 280
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3e-38 Score=331.43 Aligned_cols=255 Identities=35% Similarity=0.604 Sum_probs=211.3
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--ceEEEEE
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENLYLVM 668 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~--~~LyLVM 668 (1013)
|++++.||.|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++... ...|+||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 789999999999999999999999999999998754 2233446788999999999999999999999988 8999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||+++ +|..++.+. ..+++..+..++.||+.||+|||+.|++|+||||+||+++.++.+||+|||++.......
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~---- 154 (287)
T cd07840 80 EYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN---- 154 (287)
T ss_pred ccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCC----
Confidence 99975 899988765 579999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
........++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+..
T Consensus 155 --------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~ 208 (287)
T cd07840 155 --------------------------SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL 208 (287)
T ss_pred --------------------------cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 001122457889999998875 45789999999999999999999999887766
Q ss_pred HHHHhhhccCCC-----CCC----------------------CCCC-CCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCC
Q 001783 827 QIFDNILNRKIP-----WPR----------------------VPEE-MSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHV 878 (1013)
Q Consensus 827 ei~qkIl~~~~~-----~p~----------------------lp~~-lS~elkDLI~rMLqkDPekRPg~~TAeELLqHP 878 (1013)
.....+...... ++. .... ++..+.++|.+||+.+|.+|| ++.++++||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp---~~~~~l~~~ 285 (287)
T cd07840 209 EQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRI---SADQALQHE 285 (287)
T ss_pred HHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCc---CHHHHhhCc
Confidence 655554431100 000 0112 388999999999999999999 999999999
Q ss_pred CC
Q 001783 879 FF 880 (1013)
Q Consensus 879 FF 880 (1013)
||
T Consensus 286 ~~ 287 (287)
T cd07840 286 YF 287 (287)
T ss_pred CC
Confidence 98
No 281
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4.3e-38 Score=335.88 Aligned_cols=252 Identities=27% Similarity=0.428 Sum_probs=211.6
Q ss_pred cCCcEEEEEeeccCceEEEEEEEC-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKR-----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk-----~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~ 662 (1013)
..+|.+.+.||+|+||.||+|++. .++..+++|.+.... ......+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 467999999999999999999864 345679999886543 233467889999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC
Q 001783 663 NLYLVMEYLNGGDLYSLLRNLG----------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG 726 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~g----------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG 726 (1013)
..++||||+++++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence 9999999999999999997542 378999999999999999999999999999999999999999
Q ss_pred cEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeech
Q 001783 727 HIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSV 806 (1013)
Q Consensus 727 ~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSL 806 (1013)
.++|+|||+++...... .........|++.|+|||++.+..++.++|||||
T Consensus 161 ~~~l~dfg~a~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 211 (291)
T cd05094 161 LVKIGDFGMSRDVYSTD-----------------------------YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 211 (291)
T ss_pred cEEECCCCcccccCCCc-----------------------------eeecCCCCCcceeecChHHhccCCCCchhhHHHH
Confidence 99999999987311000 0001123457889999999999999999999999
Q ss_pred hHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 807 GIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 807 GVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
||++|||++ |.+||...+..+..+.+..... +..+..++..+.+||.+||+.||.+|| ++.++++
T Consensus 212 G~il~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~v~~ 277 (291)
T cd05094 212 GVILWEIFTYGKQPWFQLSNTEVIECITQGRV--LERPRVCPKEVYDIMLGCWQREPQQRL---NIKEIYK 277 (291)
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCC--CCCCccCCHHHHHHHHHHcccChhhCc---CHHHHHH
Confidence 999999998 9999988887777776655433 334566889999999999999999999 8888775
No 282
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.8e-38 Score=334.52 Aligned_cols=252 Identities=27% Similarity=0.445 Sum_probs=211.4
Q ss_pred cCCcEEEEEeeccCceEEEEEEEC-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKR-----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk-----~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~ 662 (1013)
..+|++.++||+|+||.||+|+.. .++..+|+|.+.... ......+.+|++++..++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVLQHQHIVRFYGVCTEGR 80 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence 357899999999999999999753 356789999886542 344568899999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCc
Q 001783 663 NLYLVMEYLNGGDLYSLLRNLG---------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGH 727 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~g---------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~ 727 (1013)
..|++|||+++|+|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.++.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCC
Confidence 9999999999999999997643 4789999999999999999999999999999999999999999
Q ss_pred EEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechh
Q 001783 728 IKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVG 807 (1013)
Q Consensus 728 VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLG 807 (1013)
+||+|||+++...... .........+++.|+|||++.+..++.++||||||
T Consensus 161 ~kL~dfg~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 211 (280)
T cd05092 161 VKIGDFGMSRDIYSTD-----------------------------YYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFG 211 (280)
T ss_pred EEECCCCceeEcCCCc-----------------------------eeecCCCccccccccCHHHhccCCcCchhhHHHHH
Confidence 9999999987311000 00011223467889999999999999999999999
Q ss_pred HHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 808 IILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 808 VILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
|++|||++ |.+||......+....+..... +..+..+++.+.+||.+||+.||.+|| ++.+|++
T Consensus 212 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~P~~Rp---~~~~l~~ 276 (280)
T cd05092 212 VVLWEIFTYGKQPWYQLSNTEAIECITQGRE--LERPRTCPPEVYAIMQGCWQREPQQRM---VIKDIHS 276 (280)
T ss_pred HHHHHHHcCCCCCCccCCHHHHHHHHHcCcc--CCCCCCCCHHHHHHHHHHccCChhhCC---CHHHHHH
Confidence 99999998 9999988777777766655432 234567899999999999999999999 8888875
No 283
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.2e-38 Score=328.30 Aligned_cols=250 Identities=25% Similarity=0.433 Sum_probs=208.1
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEE
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~Ly 665 (1013)
...++|++++.||+|+||.||+|.+. .+..+|+|.+...... .+.+.+|+.+++.++||||+++++.+. ....|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~ 76 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIY 76 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcE
Confidence 34578999999999999999999875 5667999998764331 246889999999999999999998875 45689
Q ss_pred EEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 666 LVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
++|||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 999999999999999753 458999999999999999999999999999999999999999999999999987310000
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g 822 (1013)
........++..|+|||++.+..++.++|||||||++|+|++ |.+||.+
T Consensus 157 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~ 206 (260)
T cd05070 157 ------------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG 206 (260)
T ss_pred ------------------------------cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCC
Confidence 000112345678999999988889999999999999999999 9999998
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.+..+....+.... . +..+...+..+.+||.+||+++|.+|| ++.++++
T Consensus 207 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~l~~ 255 (260)
T cd05070 207 MNNREVLEQVERGY-R-MPCPQDCPISLHELMLQCWKKDPEERP---TFEYLQS 255 (260)
T ss_pred CCHHHHHHHHHcCC-C-CCCCCcCCHHHHHHHHHHcccCcccCc---CHHHHHH
Confidence 88777777775432 2 234567899999999999999999999 7877763
No 284
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=8.2e-38 Score=339.22 Aligned_cols=254 Identities=28% Similarity=0.451 Sum_probs=217.2
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
..|...+.||+|+||.||+|++..++..||+|++........+....+.+|+.+++.++|||++++++++......|+||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 34889999999999999999999999999999987654444555678899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||+.| +|.+++.. ...+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++....
T Consensus 105 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~------- 176 (317)
T cd06635 105 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS------- 176 (317)
T ss_pred eCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC-------
Confidence 99975 78777754 4568999999999999999999999999999999999999999999999999876310
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc---cCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL---GTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~---g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
......|++.|+|||++. +..++.++|||||||++|+|++|.+||...+
T Consensus 177 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~ 228 (317)
T cd06635 177 ----------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 228 (317)
T ss_pred ----------------------------CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc
Confidence 011246889999999984 3567899999999999999999999998877
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
.......+.....+. .....+++.+.+||.+||+.+|.+|| ++.++++|+|+..
T Consensus 229 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~il~~~~~~~ 282 (317)
T cd06635 229 AMSALYHIAQNESPT-LQSNEWSDYFRNFVDSCLQKIPQDRP---TSEELLKHMFVLR 282 (317)
T ss_pred HHHHHHHHHhccCCC-CCCccccHHHHHHHHHHccCCcccCc---CHHHHHhChhhhc
Confidence 766666665544322 22446788999999999999999999 9999999999964
No 285
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=4.5e-38 Score=342.69 Aligned_cols=274 Identities=28% Similarity=0.414 Sum_probs=215.4
Q ss_pred CCcEE-EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHH-----------HHHHHHHHHHHHHhcCCCCeeEEEe
Q 001783 589 DDFEI-IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKN-----------AVESILAERDILISVRNPFVVRFFY 656 (1013)
Q Consensus 589 ddYeI-lk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e-----------~ie~~l~Ei~IL~~L~HPNIVkL~e 656 (1013)
++|.. .+.||.|+||+||+|.+..+++.||+|+++........ ....+.+|+.++..++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45765 47799999999999999999999999998764322110 1125678999999999999999999
Q ss_pred eeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCc
Q 001783 657 SFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1013)
Q Consensus 657 ~fed~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1013)
++...+..|+||||+. |+|.+++.....+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~ 166 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLA 166 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccce
Confidence 9999999999999997 599999988788999999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHh
Q 001783 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 737 k~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLT 815 (1013)
............ .... ............+++.|+|||++.+. .++.++|||||||++|+|++
T Consensus 167 ~~~~~~~~~~~~----~~~~-------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~t 229 (335)
T PTZ00024 167 RRYGYPPYSDTL----SKDE-------------TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLT 229 (335)
T ss_pred eecccccccccc----cccc-------------cccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHh
Confidence 742111000000 0000 00001122335678999999999764 46899999999999999999
Q ss_pred CCCCCCCCChhHHHHhhhccCCC-----CC--------------------CCCCCCCHHHHHHHHHhccCCcCCcCCCCC
Q 001783 816 GIPPFNAEHPQQIFDNILNRKIP-----WP--------------------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGG 870 (1013)
Q Consensus 816 Gk~PF~g~~~~ei~qkIl~~~~~-----~p--------------------~lp~~lS~elkDLI~rMLqkDPekRPg~~T 870 (1013)
|.+||.+.+..+.+..+...... |+ ......+.++.+||.+||+.+|.+|| +
T Consensus 230 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---s 306 (335)
T PTZ00024 230 GKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERI---S 306 (335)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhcc---C
Confidence 99999988776666555431100 00 01134578899999999999999999 9
Q ss_pred HHHHHhCCCCCCC
Q 001783 871 ASEVKQHVFFKDI 883 (1013)
Q Consensus 871 AeELLqHPFFk~I 883 (1013)
+++++.||||+..
T Consensus 307 ~~~~l~~~~~~~~ 319 (335)
T PTZ00024 307 AKEALKHEYFKSD 319 (335)
T ss_pred HHHHhcCcccCCC
Confidence 9999999999853
No 286
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=7.6e-38 Score=326.52 Aligned_cols=246 Identities=24% Similarity=0.351 Sum_probs=204.9
Q ss_pred EEeeccCceEEEEEEECCCC---CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEec
Q 001783 595 KPISRGAFGRVFLAKKRTTG---DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYL 671 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tg---k~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~ 671 (1013)
++||+|+||.||+|.+..++ ..||+|.+...... ...+.+.+|+.+++.++||||+++++++. .+..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46999999999999876554 78999998765432 34567889999999999999999999776 45689999999
Q ss_pred cCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCC
Q 001783 672 NGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPA 751 (1013)
Q Consensus 672 ~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~ 751 (1013)
++|+|.+++.+.+.+++..+..++.|++.||+|||..||+||||||+|||++.++.+||+|||+++.......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~------- 150 (257)
T cd05060 78 PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD------- 150 (257)
T ss_pred CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCc-------
Confidence 9999999998878899999999999999999999999999999999999999999999999999873110000
Q ss_pred ccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhHHHH
Q 001783 752 VSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFD 830 (1013)
Q Consensus 752 ~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~~ei~q 830 (1013)
.........++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+...
T Consensus 151 ---------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~ 209 (257)
T cd05060 151 ---------------------YYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIA 209 (257)
T ss_pred ---------------------ccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence 0000111235578999999998889999999999999999998 999998888777766
Q ss_pred hhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 831 NILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 831 kIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.+..... ...+..++..+.+||.+||..+|.+|| ++.++++
T Consensus 210 ~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp---~~~~l~~ 250 (257)
T cd05060 210 MLESGER--LPRPEECPQEIYSIMLSCWKYRPEDRP---TFSELES 250 (257)
T ss_pred HHHcCCc--CCCCCCCCHHHHHHHHHHhcCChhhCc---CHHHHHH
Confidence 6654432 235667899999999999999999999 7877765
No 287
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=5.5e-38 Score=345.79 Aligned_cols=254 Identities=30% Similarity=0.470 Sum_probs=208.7
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc------c
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------E 662 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~------~ 662 (1013)
++|++++.||+|+||.||+|.+..+++.||+|++.+... .....+.+.+|+.++..++||||+++++++... .
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 95 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccc
Confidence 679999999999999999999999999999999876432 223346678899999999999999999988643 3
Q ss_pred eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 663 NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
..|++++++ |++|.+++.. ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~-- 171 (345)
T cd07877 96 DVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-- 171 (345)
T ss_pred cEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccc--
Confidence 478899887 7799888765 469999999999999999999999999999999999999999999999999987310
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|++||.
T Consensus 172 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~ 219 (345)
T cd07877 172 --------------------------------DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 219 (345)
T ss_pred --------------------------------ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 00123468899999999876 568899999999999999999999998
Q ss_pred CCChhHHHHhhhccCC-----------------------C-----CCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHH
Q 001783 822 AEHPQQIFDNILNRKI-----------------------P-----WPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~-----------------------~-----~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeE 873 (1013)
..+....+..+..... . +.......++++.+||.+||+.||.+|| ++.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~---t~~e 296 (345)
T cd07877 220 GTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---TAAQ 296 (345)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcC---CHHH
Confidence 7665444443322110 0 0111124678899999999999999999 9999
Q ss_pred HHhCCCCCC
Q 001783 874 VKQHVFFKD 882 (1013)
Q Consensus 874 LLqHPFFk~ 882 (1013)
++.||||+.
T Consensus 297 ~l~h~~f~~ 305 (345)
T cd07877 297 ALAHAYFAQ 305 (345)
T ss_pred HhcChhhhh
Confidence 999999985
No 288
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.4e-38 Score=347.94 Aligned_cols=255 Identities=30% Similarity=0.482 Sum_probs=213.2
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce----
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN---- 663 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~---- 663 (1013)
-++|++.+.||.|+||.||+|++..+++.||+|++..... .......+.+|+.+++.++||||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccc-hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3679999999999999999999999999999999875432 23344667889999999999999999988876554
Q ss_pred --EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 664 --LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 664 --LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
+|+|+||+ |++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~- 169 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD- 169 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccc-
Confidence 89999999 6699999876 569999999999999999999999999999999999999999999999999987310
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
.......+|..|+|||++.+ ..++.++|||||||++|+|++|++||
T Consensus 170 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf 216 (343)
T cd07851 170 ---------------------------------DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLF 216 (343)
T ss_pred ---------------------------------ccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 00123468889999999875 46789999999999999999999999
Q ss_pred CCCChhHHHHhhhccCCC----------------------------CCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHH
Q 001783 821 NAEHPQQIFDNILNRKIP----------------------------WPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~~----------------------------~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAe 872 (1013)
.+.+..+.+..+...... +......+++.+.+||.+||+.||.+|| |+.
T Consensus 217 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rp---t~~ 293 (343)
T cd07851 217 PGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRI---TAA 293 (343)
T ss_pred CCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCC---CHH
Confidence 887776665555432110 0011234689999999999999999999 999
Q ss_pred HHHhCCCCCC
Q 001783 873 EVKQHVFFKD 882 (1013)
Q Consensus 873 ELLqHPFFk~ 882 (1013)
+|++||||..
T Consensus 294 ell~h~~~~~ 303 (343)
T cd07851 294 EALAHPYLAE 303 (343)
T ss_pred HHhcCCCccc
Confidence 9999999985
No 289
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1e-37 Score=337.56 Aligned_cols=254 Identities=24% Similarity=0.381 Sum_probs=211.2
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECC-------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeee
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRT-------TGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSF 658 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~-------tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~f 658 (1013)
..++|.+.+.||+|+||.||+|++.. ....||+|+++... .......+.+|+.+++.+ +||||+++++++
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 34679999999999999999998642 34579999987532 234456788999999999 699999999999
Q ss_pred eccceEEEEEEeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceee
Q 001783 659 TCRENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLI 722 (1013)
Q Consensus 659 ed~~~LyLVMEy~~GGSL~dlL~~~----------------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILL 722 (1013)
.....+|+||||+++|+|.+++... ..++...+..++.||+.||.|||++||+||||||+|||+
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 167 (314)
T cd05099 88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV 167 (314)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE
Confidence 9999999999999999999999653 247888999999999999999999999999999999999
Q ss_pred cCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccce
Q 001783 723 AHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTAD 802 (1013)
Q Consensus 723 d~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksD 802 (1013)
+.++.+||+|||+++....... ........+++.|||||++.+..++.++|
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 218 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDY-----------------------------YKKTSNGRLPVKWMAPEALFDRVYTHQSD 218 (314)
T ss_pred cCCCcEEEcccccccccccccc-----------------------------ccccccCCCCccccCHHHHccCCcCccch
Confidence 9999999999999873100000 00011123456899999999988999999
Q ss_pred eechhHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 803 WWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 803 IWSLGVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
||||||++|+|++ |..||.+....+.+..+..... +..+..++.++.+||.+||..||.+|| ++.++++
T Consensus 219 iwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp---s~~~ll~ 288 (314)
T cd05099 219 VWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR--MDKPSNCTHELYMLMRECWHAVPTQRP---TFKQLVE 288 (314)
T ss_pred hhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCcccCc---CHHHHHH
Confidence 9999999999999 8999998888887777765432 334667889999999999999999999 8888886
No 290
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=6.5e-38 Score=329.56 Aligned_cols=253 Identities=28% Similarity=0.447 Sum_probs=214.7
Q ss_pred CCcEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~-----tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~ 663 (1013)
++|++++.||.|+||+||+|+.+. +.+.||+|.+.... .......+.+|+.+++.++||||+++++++.+...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 679999999999999999999754 34689999886532 23355778999999999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecC
Q 001783 664 LYLVMEYLNGGDLYSLLRNLG---------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFG 734 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g---------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFG 734 (1013)
.|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~ 162 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLS 162 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccc
Confidence 999999999999999997655 68999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHH
Q 001783 735 LSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELI 814 (1013)
Q Consensus 735 LAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELL 814 (1013)
+++..... .........++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 163 ~~~~~~~~------------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~ 212 (275)
T cd05046 163 LSKDVYNS------------------------------EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVF 212 (275)
T ss_pred cccccCcc------------------------------cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHH
Confidence 98631000 001122345678899999998888899999999999999999
Q ss_pred h-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 815 V-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 815 T-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
+ |..||...........+......++ .+..++..+.++|.+||+.+|.+|| ++.+++++
T Consensus 213 ~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~i~~~l~~~p~~Rp---~~~~~l~~ 272 (275)
T cd05046 213 TQGELPFYGLSDEEVLNRLQAGKLELP-VPEGCPSRLYKLMTRCWAVNPKDRP---SFSELVSA 272 (275)
T ss_pred hCCCCCccccchHHHHHHHHcCCcCCC-CCCCCCHHHHHHHHHHcCCCcccCC---CHHHHHHH
Confidence 8 8899988777777777765554443 3457889999999999999999999 99999875
No 291
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=6.4e-38 Score=355.71 Aligned_cols=259 Identities=24% Similarity=0.355 Sum_probs=209.9
Q ss_pred CCCcccCCcEEEEEeeccCceEEEEEEECCC-----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEe
Q 001783 583 KDRTSIDDFEIIKPISRGAFGRVFLAKKRTT-----GDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFY 656 (1013)
Q Consensus 583 k~~~~lddYeIlk~LGkG~FGtVyLArdk~t-----gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e 656 (1013)
++....++|++.+.||+|+||.||+|.+... +..||||+++... .....+.+.+|+.+|..+. ||||+++++
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~ 108 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLG 108 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEE
Confidence 4455567899999999999999999987533 3479999997542 2344568899999999996 999999999
Q ss_pred eeeccceEEEEEEeccCCChHHHHHhc-----------------------------------------------------
Q 001783 657 SFTCRENLYLVMEYLNGGDLYSLLRNL----------------------------------------------------- 683 (1013)
Q Consensus 657 ~fed~~~LyLVMEy~~GGSL~dlL~~~----------------------------------------------------- 683 (1013)
++.....+|||||||++|+|.+++...
T Consensus 109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 109 ACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred EEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 999999999999999999999988542
Q ss_pred -------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCce
Q 001783 684 -------------------------------------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNL 720 (1013)
Q Consensus 684 -------------------------------------------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNI 720 (1013)
..+++..+..++.||+.||+|||++||+||||||+||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Ni 268 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNV 268 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhE
Confidence 1367788899999999999999999999999999999
Q ss_pred eecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCcc
Q 001783 721 LIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTT 800 (1013)
Q Consensus 721 LLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~k 800 (1013)
|++.++.+||+|||+++....... ........|++.|+|||++.+..++.+
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 319 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSN-----------------------------YVSKGSTFLPVKWMAPESIFDNLYTTL 319 (400)
T ss_pred EEeCCCEEEEEeCCcceecccccc-----------------------------ccccCCcCCCcceEChhhhcCCCCCch
Confidence 999999999999999873110000 001123467889999999999999999
Q ss_pred ceeechhHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 801 ADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 801 sDIWSLGVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
+|||||||++|||++ |..||........+......... +..+..++.++.+||.+||+.||.+|| ++.+|.+
T Consensus 320 ~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RP---t~~~l~~ 392 (400)
T cd05105 320 SDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYR-MAKPDHATQEVYDIMVKCWNSEPEKRP---SFLHLSD 392 (400)
T ss_pred hhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCC-CCCCccCCHHHHHHHHHHCccCHhHCc---CHHHHHH
Confidence 999999999999997 99999876544444333333332 234567899999999999999999999 7766655
No 292
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4.1e-38 Score=335.43 Aligned_cols=259 Identities=32% Similarity=0.506 Sum_probs=209.8
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc----
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE---- 662 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~---- 662 (1013)
..++|++.+.||+|+||.||+|.++.+|+.||+|+++.... .......+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45789999999999999999999999999999999875432 1223356678999999999999999999887655
Q ss_pred ------eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCC
Q 001783 663 ------NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1013)
Q Consensus 663 ------~LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1013)
.+|+||||+++ +|...+... ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~ 162 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGL 162 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccc
Confidence 79999999986 777777654 4699999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHH
Q 001783 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELI 814 (1013)
Q Consensus 736 Ak~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELL 814 (1013)
+........ .......+++.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 163 ~~~~~~~~~------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~ 212 (302)
T cd07864 163 ARLYNSEES------------------------------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 212 (302)
T ss_pred cccccCCcc------------------------------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHH
Confidence 873110000 00112356788999999875 35789999999999999999
Q ss_pred hCCCCCCCCChhHHHHhhhccCCC-----CC----------------------CCCCCCCHHHHHHHHHhccCCcCCcCC
Q 001783 815 VGIPPFNAEHPQQIFDNILNRKIP-----WP----------------------RVPEEMSPEAHDLIDRFLTEDPHQRLG 867 (1013)
Q Consensus 815 TGk~PF~g~~~~ei~qkIl~~~~~-----~p----------------------~lp~~lS~elkDLI~rMLqkDPekRPg 867 (1013)
+|++||...+..+....+...... ++ .....++..+.+||.+||+.||.+||
T Consensus 213 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp- 291 (302)
T cd07864 213 TKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRC- 291 (302)
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCC-
Confidence 999999877665554444331100 00 01224688999999999999999999
Q ss_pred CCCHHHHHhCCCC
Q 001783 868 SGGASEVKQHVFF 880 (1013)
Q Consensus 868 ~~TAeELLqHPFF 880 (1013)
++.+++.||||
T Consensus 292 --~~~~il~~~~~ 302 (302)
T cd07864 292 --TAEEALNSPWL 302 (302)
T ss_pred --CHHHHhcCCCC
Confidence 99999999997
No 293
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-39 Score=363.53 Aligned_cols=247 Identities=28% Similarity=0.472 Sum_probs=211.6
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~ 663 (1013)
+....+.+.+++.||+|.||+||+|.+.. ...||+|.++...+ ..+.+.+|+++|++|+|++||++++++...+.
T Consensus 201 wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~p 275 (468)
T KOG0197|consen 201 WEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSM----SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEP 275 (468)
T ss_pred eeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEecccc----ChhHHHHHHHHHHhCcccCeEEEEEEEecCCc
Confidence 34444568889999999999999999953 34799999986543 23567799999999999999999999999889
Q ss_pred EEEEEEeccCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 664 LYLVMEYLNGGDLYSLLRN--LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~--~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
+|||||||+.|+|.++++. .+.+...+...++.|||.|++||+++++|||||...||||+++..+||+|||||+..
T Consensus 276 iyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~-- 353 (468)
T KOG0197|consen 276 IYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLI-- 353 (468)
T ss_pred eEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccccccccc--
Confidence 9999999999999999986 467999999999999999999999999999999999999999999999999999931
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPF 820 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF 820 (1013)
.. ++.. .....--...|+|||.+....++.++||||||++||||+| |+.||
T Consensus 354 ~d-----------------~~Y~-----------~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py 405 (468)
T KOG0197|consen 354 GD-----------------DEYT-----------ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPY 405 (468)
T ss_pred CC-----------------Ccee-----------ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCC
Confidence 00 0000 0111123457999999999999999999999999999998 99999
Q ss_pred CCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCC
Q 001783 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLG 867 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg 867 (1013)
.+.+..++.+.+..+. .+| .|..+|+++.+++..||+.+|++||+
T Consensus 406 ~~msn~ev~~~le~Gy-Rlp-~P~~CP~~vY~lM~~CW~~~P~~RPt 450 (468)
T KOG0197|consen 406 PGMSNEEVLELLERGY-RLP-RPEGCPDEVYELMKSCWHEDPEDRPT 450 (468)
T ss_pred CCCCHHHHHHHHhccC-cCC-CCCCCCHHHHHHHHHHhhCCcccCCC
Confidence 9999999999887654 344 57899999999999999999999993
No 294
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.1e-38 Score=329.34 Aligned_cols=254 Identities=28% Similarity=0.499 Sum_probs=214.6
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc--cHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI--RKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~--~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
+|.+.+.||+|+||+||++.+..++..+++|+++..... .......+..|..+++.++||||+++++.+.+....|+|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 489999999999999999999888888888887653321 122334567899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 668 MEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
|||+++++|.+++.. ...+++..++.++.|++.||.|||++|++|+||||+||+++. +.++|+|||+++.....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~- 158 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS- 158 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCC-
Confidence 999999999998854 356899999999999999999999999999999999999975 67999999998741100
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||...
T Consensus 159 ------------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~ 208 (260)
T cd08222 159 ------------------------------CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ 208 (260)
T ss_pred ------------------------------cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 00112346889999999998888999999999999999999999999887
Q ss_pred ChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
........+.... .+..+..++.++.++|.+||..||.+|| ++.++++||||
T Consensus 209 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~ 260 (260)
T cd08222 209 NFLSVVLRIVEGP--TPSLPETYSRQLNSIMQSMLNKDPSLRP---SAAEILRNPFI 260 (260)
T ss_pred cHHHHHHHHHcCC--CCCCcchhcHHHHHHHHHHhcCChhhCc---CHHHHhhCCCC
Confidence 7766666665433 3455677899999999999999999999 99999999997
No 295
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.2e-37 Score=327.13 Aligned_cols=256 Identities=24% Similarity=0.371 Sum_probs=211.9
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCC---EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGD---LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk---~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
+.+|++.+.||+|+||.||+|.++.+++ .||+|++++.. .......+..|+.+++.++||||+++++++......
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 4679999999999999999999987665 69999987542 344557889999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
|+||||+++|+|.+++... +.+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++..... .
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~-~ 159 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED-D 159 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCcccccccc-C
Confidence 9999999999999999754 5689999999999999999999999999999999999999999999999999863110 0
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g 822 (1013)
... +. ........++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 160 ~~~----------------~~---------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~ 214 (269)
T cd05065 160 TSD----------------PT---------YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 214 (269)
T ss_pred ccc----------------cc---------cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCC
Confidence 000 00 000011123567999999998899999999999999999886 9999998
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.+..+....+... ...+ .+..++..+.+++.+||..+|.+|| ++.++++
T Consensus 215 ~~~~~~~~~i~~~-~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 263 (269)
T cd05065 215 MSNQDVINAIEQD-YRLP-PPMDCPTALHQLMLDCWQKDRNARP---KFGQIVS 263 (269)
T ss_pred CCHHHHHHHHHcC-CcCC-CcccCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 8877777776433 2222 3457889999999999999999999 8888876
No 296
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.1e-37 Score=325.99 Aligned_cols=248 Identities=24% Similarity=0.415 Sum_probs=207.5
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
-++|+++++||+|+||.||+|... +++.||+|.+..... ....+.+|+.+++.++||||+++++.+. .+.+|++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYII 78 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEE
Confidence 467999999999999999999864 578899999875442 2356889999999999999999998764 5678999
Q ss_pred EEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 668 MEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
|||+.+++|.+++... ..+++..+..++.|++.||+|||+.|++||||||+||+++.++.++|+|||++.......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-- 156 (260)
T cd05067 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE-- 156 (260)
T ss_pred EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC--
Confidence 9999999999998653 358999999999999999999999999999999999999999999999999986311000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEH 824 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~ 824 (1013)
........++..|+|||++.+..++.++|||||||++|||++ |++||.+.+
T Consensus 157 ----------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 208 (260)
T cd05067 157 ----------------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT 208 (260)
T ss_pred ----------------------------cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence 000112346778999999998889999999999999999999 999999887
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
..+....+.... . +..+...+.++.+||.+||..+|.+|| +++++++
T Consensus 209 ~~~~~~~~~~~~-~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~ 255 (260)
T cd05067 209 NPEVIQNLERGY-R-MPRPDNCPEELYELMRLCWKEKPEERP---TFEYLRS 255 (260)
T ss_pred hHHHHHHHHcCC-C-CCCCCCCCHHHHHHHHHHccCChhhCC---CHHHHHH
Confidence 777766664432 2 234567889999999999999999999 8888775
No 297
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.9e-38 Score=335.87 Aligned_cols=257 Identities=22% Similarity=0.377 Sum_probs=213.9
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEEC-------CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEe
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKR-------TTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFY 656 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk-------~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e 656 (1013)
....++|++.+.||+|+||.||+|++. ..+..||+|++.... .......+.+|+.++..+ +||||+++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 445678999999999999999999853 234579999987532 234457788999999999 8999999999
Q ss_pred eeeccceEEEEEEeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCce
Q 001783 657 SFTCRENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNL 720 (1013)
Q Consensus 657 ~fed~~~LyLVMEy~~GGSL~dlL~~~----------------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNI 720 (1013)
.+.....+|+||||+++|+|.+++.+. ..++...+..++.||+.||.|||++||+||||||+||
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 999999999999999999999999753 2367788899999999999999999999999999999
Q ss_pred eecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCcc
Q 001783 721 LIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTT 800 (1013)
Q Consensus 721 LLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~k 800 (1013)
|++.++.+||+|||+++....... ........+++.|+|||++.+..++.+
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 219 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDY-----------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQ 219 (304)
T ss_pred EEcCCCcEEECCCccceecccccc-----------------------------cccccCCCCCceeeCchhhccCCCCch
Confidence 999999999999999873110000 001122356788999999999889999
Q ss_pred ceeechhHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 801 ADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 801 sDIWSLGVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
+|||||||++|+|++ |..||.+.+..+++..+..... ...+..++.++.+||.+||..+|.+|| ++.++++.
T Consensus 220 ~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp---s~~e~l~~ 292 (304)
T cd05101 220 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR--MDKPANCTNELYMMMRDCWHAIPSHRP---TFKQLVED 292 (304)
T ss_pred hhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcccChhhCC---CHHHHHHH
Confidence 999999999999998 8999998888888777755432 234567899999999999999999999 89998875
No 298
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1e-37 Score=328.00 Aligned_cols=254 Identities=24% Similarity=0.355 Sum_probs=210.6
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCC---EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGD---LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk---~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
.++|++.+.||+|+||.||+|+++.++. .+|+|.++... .......+.+|+.++..++||||+++++++...+.+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 3679999999999999999999865543 79999986543 233456788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
|+||||++|++|.+++.+. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 9999999999999999765 468999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g 822 (1013)
. .........++..|+|||++.+..++.++|+|||||++|||++ |..||..
T Consensus 161 ~----------------------------~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~ 212 (267)
T cd05066 161 E----------------------------AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWE 212 (267)
T ss_pred c----------------------------eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCccc
Confidence 0 0000112334678999999998889999999999999999886 9999988
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
....+....+.... .. ..+..+++.+.+|+.+||+++|.+|| ++.++++
T Consensus 213 ~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 261 (267)
T cd05066 213 MSNQDVIKAIEEGY-RL-PAPMDCPAALHQLMLDCWQKDRNERP---KFEQIVS 261 (267)
T ss_pred CCHHHHHHHHhCCC-cC-CCCCCCCHHHHHHHHHHcccCchhCC---CHHHHHH
Confidence 77777776665542 22 23456889999999999999999999 7777764
No 299
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.1e-38 Score=338.84 Aligned_cols=254 Identities=31% Similarity=0.557 Sum_probs=214.1
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEe
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy 670 (1013)
|+...+||+|+||.||++..+.+++.||+|++.... ......+.+|+.+++.++||||+++++.|...++.|+||||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 444577999999999999999999999999875432 23456788999999999999999999999999999999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCC
Q 001783 671 LNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGP 750 (1013)
Q Consensus 671 ~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p 750 (1013)
+++++|.+++.. +.+++..++.++.||+.||+|||+.||+|+||||+||+++.++.++|+|||++......
T Consensus 99 ~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~-------- 169 (292)
T cd06657 99 LEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-------- 169 (292)
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccc--------
Confidence 999999998754 56899999999999999999999999999999999999999999999999987631000
Q ss_pred CccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHH
Q 001783 751 AVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFD 830 (1013)
Q Consensus 751 ~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~q 830 (1013)
........||+.|+|||.+.+..++.++|+|||||++|+|++|.+||.+....+...
T Consensus 170 -----------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~ 226 (292)
T cd06657 170 -----------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK 226 (292)
T ss_pred -----------------------cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 001123568999999999988888999999999999999999999998877666555
Q ss_pred hhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 831 NILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 831 kIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
.+.............++..+.++|.+||+.||.+|| ++.++++||||..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~---~~~~ll~~~~~~~ 275 (292)
T cd06657 227 MIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRA---TAAELLKHPFLAK 275 (292)
T ss_pred HHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCc---CHHHHhcChHHhc
Confidence 554332221222345789999999999999999999 9999999999975
No 300
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=5.9e-38 Score=344.76 Aligned_cols=259 Identities=29% Similarity=0.481 Sum_probs=208.3
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc-------
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------- 661 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~------- 661 (1013)
.+|++.+.||.|+||.||+|.++.+++.||+|++..... ...+.+.+|+.+++.++||||+++++.+...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 579999999999999999999999999999999876432 3456788999999999999999999776654
Q ss_pred -------ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC-CCcEEEeec
Q 001783 662 -------ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDF 733 (1013)
Q Consensus 662 -------~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDF 733 (1013)
..+|+||||+. ++|..++.. +.+++..++.++.||+.||+|||++||+||||||+||+++. ++.+||+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCc
Confidence 35899999997 489888864 56899999999999999999999999999999999999975 567899999
Q ss_pred CCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHH
Q 001783 734 GLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFE 812 (1013)
Q Consensus 734 GLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYE 812 (1013)
|+++... .... .........||..|+|||++.+ ..++.++|||||||++|+
T Consensus 160 g~~~~~~--~~~~--------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~e 211 (342)
T cd07854 160 GLARIVD--PHYS--------------------------HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE 211 (342)
T ss_pred ccceecC--Cccc--------------------------cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHH
Confidence 9986310 0000 0000122368899999998764 568899999999999999
Q ss_pred HHhCCCCCCCCChhHHHHhhhccC---------------------------CCCCCCCCCCCHHHHHHHHHhccCCcCCc
Q 001783 813 LIVGIPPFNAEHPQQIFDNILNRK---------------------------IPWPRVPEEMSPEAHDLIDRFLTEDPHQR 865 (1013)
Q Consensus 813 LLTGk~PF~g~~~~ei~qkIl~~~---------------------------~~~p~lp~~lS~elkDLI~rMLqkDPekR 865 (1013)
|++|..||.+.+..+....+.... .++......++.++.+||.+||+.||.+|
T Consensus 212 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 291 (342)
T cd07854 212 MLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDR 291 (342)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhc
Confidence 999999998776555444433211 00001123578899999999999999999
Q ss_pred CCCCCHHHHHhCCCCCCC
Q 001783 866 LGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 866 Pg~~TAeELLqHPFFk~I 883 (1013)
| ++.++++||||+.+
T Consensus 292 ~---t~~ell~h~~~~~~ 306 (342)
T cd07854 292 L---TAEEALMHPYMSCY 306 (342)
T ss_pred c---CHHHHhCCCccccc
Confidence 9 99999999999854
No 301
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=9.5e-38 Score=337.02 Aligned_cols=258 Identities=24% Similarity=0.368 Sum_probs=212.8
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEE-----CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEee
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKK-----RTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYS 657 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArd-----k~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~ 657 (1013)
+....++|++.+.||+|+||.||+|.+ ..++..||+|+++... .....+.+.+|+.+++++ +||||+++++.
T Consensus 30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 107 (302)
T cd05055 30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGA 107 (302)
T ss_pred ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEE
Confidence 344556899999999999999999975 3355689999987543 234456789999999999 79999999999
Q ss_pred eeccceEEEEEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCC
Q 001783 658 FTCRENLYLVMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1013)
Q Consensus 658 fed~~~LyLVMEy~~GGSL~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1013)
+...+.+|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++||+|+||||+|||++.++.++|+|||+
T Consensus 108 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 108 CTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred EecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcc
Confidence 999999999999999999999997543 389999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh
Q 001783 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 736 Ak~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT 815 (1013)
++....... ........+++.|+|||++.+..++.++|||||||++|+|++
T Consensus 188 ~~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t 238 (302)
T cd05055 188 ARDIMNDSN-----------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238 (302)
T ss_pred cccccCCCc-----------------------------eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHh
Confidence 873110000 000112356788999999999889999999999999999998
Q ss_pred -CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 816 -GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 816 -Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
|.+||........+......... +..+...++++.+|+.+||.++|++|| ++.++++
T Consensus 239 ~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rp---t~~ell~ 296 (302)
T cd05055 239 LGSNPYPGMPVDSKFYKLIKEGYR-MAQPEHAPAEIYDIMKTCWDADPLKRP---TFKQIVQ 296 (302)
T ss_pred CCCCCcCCCCchHHHHHHHHcCCc-CCCCCCCCHHHHHHHHHHcCCCchhCc---CHHHHHH
Confidence 99999887766555555443332 234556789999999999999999999 8988876
No 302
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.8e-37 Score=323.20 Aligned_cols=251 Identities=24% Similarity=0.379 Sum_probs=211.3
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEE
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~Ly 665 (1013)
...++|++.+.||.|+||.||+|.+. .++.||+|.+..... ..+.+.+|+.+++.++||||+++++++......|
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY 77 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceE
Confidence 34578999999999999999999975 557899999875432 2356789999999999999999999999989999
Q ss_pred EEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 666 LVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
+||||+++++|.+++... ..++...+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||+++.....
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~- 156 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD- 156 (261)
T ss_pred EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccch-
Confidence 999999999999999764 36899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g 822 (1013)
.........++..|+|||.+.+..++.++|+|||||++|+|++ |+.||.+
T Consensus 157 -----------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 207 (261)
T cd05034 157 -----------------------------EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPG 207 (261)
T ss_pred -----------------------------hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 0000112235678999999998889999999999999999998 9999998
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.+.......+..... ...+...+.++.+++.+||+.+|.+|| +++++++
T Consensus 208 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~l~~ 256 (261)
T cd05034 208 MTNREVLEQVERGYR--MPRPPNCPEELYDLMLQCWDKDPEERP---TFEYLQS 256 (261)
T ss_pred CCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcccCcccCC---CHHHHHH
Confidence 887777777765422 223556789999999999999999999 8887764
No 303
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=4.1e-38 Score=330.49 Aligned_cols=254 Identities=33% Similarity=0.580 Sum_probs=211.7
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEe
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy 670 (1013)
|++.+.||.|++|.||+|.+..+++.+|+|.+..... .......+.+|+.+++.++||||+++++.+.....+|+||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 6788999999999999999999999999999876543 223456788899999999999999999999999999999999
Q ss_pred ccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 671 LNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 671 ~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
+.+ +|.+++... +.+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~------ 152 (283)
T cd05118 80 MDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV------ 152 (283)
T ss_pred cCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc------
Confidence 975 888888663 579999999999999999999999999999999999999999999999999886311000
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
.......++..|+|||.+.+. .++.++|+|||||++|+|++|++||...+..+.
T Consensus 153 -------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~ 207 (283)
T cd05118 153 -------------------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ 207 (283)
T ss_pred -------------------------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 011224678899999999876 789999999999999999999999988776555
Q ss_pred HHhhhccCCC-------------------C--------CCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 829 FDNILNRKIP-------------------W--------PRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 829 ~qkIl~~~~~-------------------~--------p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
+..+...... + ......++.++.+||.+||.+||.+|| ++.+++.||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp---~~~~ll~~~~~ 283 (283)
T cd05118 208 LFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRI---TAEQALAHPYF 283 (283)
T ss_pred HHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCc---CHHHHhhCCCC
Confidence 4444321000 0 011234788999999999999999999 99999999997
No 304
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.6e-37 Score=325.49 Aligned_cols=254 Identities=23% Similarity=0.345 Sum_probs=211.4
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCC---EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGD---LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk---~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
.++|+..+.||+|+||.||+|.++.++. .+|+|.++... .....+.+.+|+.++..++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence 3579999999999999999999876655 79999886542 233456788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
|+||||+++++|.+++... +.+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 9999999999999999764 578999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g 822 (1013)
. ..........++.|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 162 ~----------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~ 213 (268)
T cd05063 162 E----------------------------GTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWD 213 (268)
T ss_pred c----------------------------cceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCc
Confidence 0 0000111234567999999998889999999999999999997 9999988
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.+..+....+.... ..+ .+..++.++.+|+.+||+.+|.+|| ++.++++
T Consensus 214 ~~~~~~~~~i~~~~-~~~-~~~~~~~~~~~li~~c~~~~p~~Rp---~~~~i~~ 262 (268)
T cd05063 214 MSNHEVMKAINDGF-RLP-APMDCPSAVYQLMLQCWQQDRARRP---RFVDIVN 262 (268)
T ss_pred CCHHHHHHHHhcCC-CCC-CCCCCCHHHHHHHHHHcCCCcccCc---CHHHHHH
Confidence 88777777776532 222 3456889999999999999999999 8888775
No 305
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=9.5e-38 Score=328.43 Aligned_cols=248 Identities=25% Similarity=0.419 Sum_probs=205.9
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.++|++.++||+|+||.||+|++..+ ..||+|++++... ..+.+.+|+.+++.++||||+++++.+. ....|+|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv 78 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIV 78 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEE
Confidence 36799999999999999999998655 4599999876432 2246788999999999999999998875 4568999
Q ss_pred EEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 668 MEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
|||+++|+|.+++.+. ..+++..+..++.|++.||+|||+.||+||||||+||+++.++.++|+|||+++.... ..
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~--~~ 156 (262)
T cd05071 79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NE 156 (262)
T ss_pred EEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccc--cc
Confidence 9999999999999763 3589999999999999999999999999999999999999999999999999863100 00
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEH 824 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~ 824 (1013)
........++..|+|||++.+..++.++|||||||++|+|++ |.+||.+..
T Consensus 157 ----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~ 208 (262)
T cd05071 157 ----------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 208 (262)
T ss_pred ----------------------------cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 000112346778999999998889999999999999999999 899998888
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
..+....+.... .. ..+..++..+.+||.+||+.||.+|| ++.++++
T Consensus 209 ~~~~~~~~~~~~-~~-~~~~~~~~~l~~li~~~l~~~p~~Rp---~~~~~~~ 255 (262)
T cd05071 209 NREVLDQVERGY-RM-PCPPECPESLHDLMCQCWRKEPEERP---TFEYLQA 255 (262)
T ss_pred hHHHHHHHhcCC-CC-CCccccCHHHHHHHHHHccCCcccCC---CHHHHHH
Confidence 777777665432 22 23457889999999999999999999 7777664
No 306
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.1e-37 Score=327.55 Aligned_cols=245 Identities=26% Similarity=0.391 Sum_probs=200.7
Q ss_pred EeeccCceEEEEEEEC--CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 596 PISRGAFGRVFLAKKR--TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 596 ~LGkG~FGtVyLArdk--~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++.++||||+++++++.. ...|+||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCC
Confidence 3899999999999775 445679999987542 24445678999999999999999999998764 578999999999
Q ss_pred CChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCc
Q 001783 674 GDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAV 752 (1013)
Q Consensus 674 GSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~ 752 (1013)
++|.+++.. .+.+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~-------- 150 (257)
T cd05115 79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDS-------- 150 (257)
T ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCcc--------
Confidence 999999975 45799999999999999999999999999999999999999999999999999873110000
Q ss_pred cCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhHHHHh
Q 001783 753 SGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFDN 831 (1013)
Q Consensus 753 ~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~~ei~qk 831 (1013)
.........+++.|+|||++.+..++.++|||||||++|+|++ |..||......+....
T Consensus 151 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~ 210 (257)
T cd05115 151 --------------------YYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSF 210 (257)
T ss_pred --------------------ceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH
Confidence 0000112234678999999998889999999999999999996 9999998887777666
Q ss_pred hhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 832 ILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 832 Il~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
+..... +..+...++++.++|.+||..||.+|| ++.+|++
T Consensus 211 ~~~~~~--~~~~~~~~~~l~~li~~c~~~~~~~Rp---~~~~i~~ 250 (257)
T cd05115 211 IEQGKR--LDCPAECPPEMYALMKDCWIYKWEDRP---NFAKVEE 250 (257)
T ss_pred HHCCCC--CCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 655432 345677899999999999999999999 5655544
No 307
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.3e-37 Score=341.06 Aligned_cols=255 Identities=31% Similarity=0.517 Sum_probs=208.6
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec-cceEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC-RENLYL 666 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed-~~~LyL 666 (1013)
-++|++++.||.|+||.||+|.++.+++.||+|++.+... .....+.+.+|+.++..++||||++++++|.. ...+|+
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 3679999999999999999999999999999998865432 22344677899999999999999999999876 567999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
||||+ +++|..++.. ..+++..+..++.||+.||.|||++||+||||||.|||++.++.++|+|||++....
T Consensus 88 v~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~------ 159 (328)
T cd07856 88 VTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQD------ 159 (328)
T ss_pred Eeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccC------
Confidence 99998 5689888864 468899999999999999999999999999999999999999999999999886210
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
.......|++.|+|||++.+ ..++.++|||||||++|+|++|++||.....
T Consensus 160 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~ 211 (328)
T cd07856 160 ----------------------------PQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH 211 (328)
T ss_pred ----------------------------CCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 00123467889999999876 5689999999999999999999999987654
Q ss_pred hHHHHhhhcc----------------------------CCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 826 QQIFDNILNR----------------------------KIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 826 ~ei~qkIl~~----------------------------~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
...+..+... ..+.......++..+.++|.+||+.+|++|| ++++++.|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---t~~ell~~ 288 (328)
T cd07856 212 VNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRI---SAAEALAH 288 (328)
T ss_pred HHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCC---CHHHHhcC
Confidence 3322221110 0001111235788999999999999999999 99999999
Q ss_pred CCCCC
Q 001783 878 VFFKD 882 (1013)
Q Consensus 878 PFFk~ 882 (1013)
|||..
T Consensus 289 ~~~~~ 293 (328)
T cd07856 289 PYLAP 293 (328)
T ss_pred Ccccc
Confidence 99974
No 308
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.2e-37 Score=333.27 Aligned_cols=260 Identities=30% Similarity=0.528 Sum_probs=210.2
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccce
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~ 663 (1013)
....++|++.+.||.|+||+||+|.+..+++.||||++++... ......+..|+.++... .||||+++++++.+...
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~ 88 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSD 88 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCe
Confidence 4456889999999999999999999998999999999976532 22334566677766666 49999999999999999
Q ss_pred EEEEEEeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 664 LYLVMEYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
+|+||||+.+ +|..++.. .+.+++..+..++.||+.||.|||+ .||+||||+|+||+++.++.+||+|||++....
T Consensus 89 ~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~- 166 (296)
T cd06618 89 VFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV- 166 (296)
T ss_pred EEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhcc-
Confidence 9999999854 77777755 3578999999999999999999997 699999999999999999999999999986310
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC----CCccceeechhHHHHHHHhCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG----HGTTADWWSVGIILFELIVGI 817 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~----ys~ksDIWSLGVILYELLTGk 817 (1013)
.. .......|++.|+|||++.+.. ++.++||||||+++|+|++|+
T Consensus 167 ~~-------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 215 (296)
T cd06618 167 DS-------------------------------KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215 (296)
T ss_pred CC-------------------------------CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCC
Confidence 00 0011235788999999997654 788999999999999999999
Q ss_pred CCCCCCC-hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 818 PPFNAEH-PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 818 ~PF~g~~-~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
.||.... ..+.+..+.....+.......++.++.+||.+||..||.+|| +++++++||||..
T Consensus 216 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---~~~~il~~~~~~~ 278 (296)
T cd06618 216 FPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRP---KYRELLQHPFIRR 278 (296)
T ss_pred CCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCC---CHHHHhcChhhhc
Confidence 9997633 234455555443222122234789999999999999999999 9999999999984
No 309
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.2e-37 Score=380.55 Aligned_cols=273 Identities=26% Similarity=0.414 Sum_probs=210.1
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
+++|+++++||+|+||.||+|++..+|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 46899999999999999999999999999999999765433444567889999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCc
Q 001783 668 MEYLNGGDLYSLLRNL-----------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~-----------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1013)
|||++||+|.+++.+. ..++...+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence 9999999999998642 23456677889999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhC
Q 001783 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVG 816 (1013)
Q Consensus 737 k~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG 816 (1013)
+....... ........... . ...........+||+.|||||++.+..++.++|||||||++|||+||
T Consensus 161 k~i~~~~~-~~~~l~~~~~~--------s----~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG 227 (932)
T PRK13184 161 IFKKLEEE-DLLDIDVDERN--------I----CYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTL 227 (932)
T ss_pred eecccccc-ccccccccccc--------c----cccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHC
Confidence 74211100 00000000000 0 00001112346899999999999999999999999999999999999
Q ss_pred CCCCCCCChhHHHHhhh-ccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 817 IPPFNAEHPQQIFDNIL-NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 817 k~PF~g~~~~ei~qkIl-~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
..||............. ...... .....+++.+.+++.+||+.||.+|++ +++++++
T Consensus 228 ~~PF~~~~~~ki~~~~~i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~s--s~eeLl~ 285 (932)
T PRK13184 228 SFPYRRKKGRKISYRDVILSPIEV-APYREIPPFLSQIAMKALAVDPAERYS--SVQELKQ 285 (932)
T ss_pred CCCCCCcchhhhhhhhhccChhhc-cccccCCHHHHHHHHHHccCChhhCcC--HHHHHHH
Confidence 99998765543332211 111111 112367899999999999999999983 4444443
No 310
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1e-37 Score=331.42 Aligned_cols=253 Identities=23% Similarity=0.407 Sum_probs=211.3
Q ss_pred cCCcEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~-----tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~ 662 (1013)
.++|++.+.||.|+||.||+|.+.. ++..||+|++.... .......+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 4679999999999999999998753 67899999987543 2334567889999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcC----------------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCce
Q 001783 663 NLYLVMEYLNGGDLYSLLRNLG----------------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNL 720 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~g----------------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNI 720 (1013)
.+|+||||+++|+|.+++.... .+++..+..++.||+.||.|||++|++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 9999999999999999996431 367888999999999999999999999999999999
Q ss_pred eecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCcc
Q 001783 721 LIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTT 800 (1013)
Q Consensus 721 LLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~k 800 (1013)
|++.++.++|+|||++........ ........++..|+|||++.+..++.+
T Consensus 162 l~~~~~~~~l~dfg~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 212 (288)
T cd05050 162 LVGENMVVKIADFGLSRNIYSADY-----------------------------YKASENDAIPIRWMPPESIFYNRYTTE 212 (288)
T ss_pred EecCCCceEECccccceecccCcc-----------------------------ccccCCCccChhhcCHHHHhcCCCCch
Confidence 999999999999999863110000 000112244667999999998899999
Q ss_pred ceeechhHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 801 ADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 801 sDIWSLGVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
+|||||||++|||++ |..||.+.+..+....+..... +..+..++.++.+||.+||+.||.+|| ++.|+++
T Consensus 213 ~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~el~~ 284 (288)
T cd05050 213 SDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNV--LSCPDNCPLELYNLMRLCWSKLPSDRP---SFASINR 284 (288)
T ss_pred hHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHcccCcccCC---CHHHHHH
Confidence 999999999999997 8899988888887777765443 234567899999999999999999999 8888764
No 311
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=8.3e-38 Score=341.25 Aligned_cols=261 Identities=30% Similarity=0.447 Sum_probs=209.2
Q ss_pred CcEEEEEeeccCceEEEEEEECCC--CCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeec----cc
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTT--GDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTC----RE 662 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~t--gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed----~~ 662 (1013)
+|++.+.||+|+||.||+|++..+ +..||+|++.... ........+.+|+.+++.+ +||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 489999999999999999999888 8999999986432 2223346778899999998 59999999986433 24
Q ss_pred eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 663 NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
.+|++|||+. ++|.+++.....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~ 158 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN 158 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence 6889999986 599999988788999999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
.. ..........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.
T Consensus 159 ~~---------------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~ 211 (332)
T cd07857 159 PG---------------------------ENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFK 211 (332)
T ss_pred cc---------------------------cccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCC
Confidence 00 00011224579999999998876 568999999999999999999999998
Q ss_pred CCChhHHHHhhhccC----------------------------CCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHH
Q 001783 822 AEHPQQIFDNILNRK----------------------------IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~----------------------------~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeE 873 (1013)
..+....+..++... ..++......+..+.+||.+||+.||.+|| ++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---t~~~ 288 (332)
T cd07857 212 GKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRI---SVEE 288 (332)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCC---CHHH
Confidence 766544433322210 111122234688999999999999999999 9999
Q ss_pred HHhCCCCCC
Q 001783 874 VKQHVFFKD 882 (1013)
Q Consensus 874 LLqHPFFk~ 882 (1013)
++.||||..
T Consensus 289 ll~~~~~~~ 297 (332)
T cd07857 289 ALEHPYLAI 297 (332)
T ss_pred HhcChhhhh
Confidence 999999964
No 312
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.8e-37 Score=327.12 Aligned_cols=242 Identities=26% Similarity=0.408 Sum_probs=202.0
Q ss_pred EeeccCceEEEEEEECCCCC--EEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceEEEEEEecc
Q 001783 596 PISRGAFGRVFLAKKRTTGD--LFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYLN 672 (1013)
Q Consensus 596 ~LGkG~FGtVyLArdk~tgk--~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~LyLVMEy~~ 672 (1013)
.||+|+||.||+|++..++. .+|+|.++.. ........+.+|+.++.++ +||||+++++++.....+|+||||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 58999999999999988776 4688877642 2234456788999999999 79999999999999999999999999
Q ss_pred CCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCc
Q 001783 673 GGDLYSLLRNLG----------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1013)
Q Consensus 673 GGSL~dlL~~~g----------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1013)
+|+|.+++...+ .+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||++
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence 999999997542 4789999999999999999999999999999999999999999999999997
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-
Q 001783 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV- 815 (1013)
Q Consensus 737 k~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT- 815 (1013)
..... ........++..|+|||++.+..++.++|||||||++|||++
T Consensus 160 ~~~~~--------------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~ 207 (270)
T cd05047 160 RGQEV--------------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL 207 (270)
T ss_pred cccch--------------------------------hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcC
Confidence 52000 000111234667999999998889999999999999999997
Q ss_pred CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 816 GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 816 Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
|..||.+.+..+.+..+..... ...+..++.++.+|+.+||..||.+|| ++.++++
T Consensus 208 g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~ 263 (270)
T cd05047 208 GGTPYCGMTCAELYEKLPQGYR--LEKPLNCDDEVYDLMRQCWREKPYERP---SFAQILV 263 (270)
T ss_pred CCCCccccCHHHHHHHHhCCCC--CCCCCcCCHHHHHHHHHHcccChhhCC---CHHHHHH
Confidence 9999988877777776654321 234556889999999999999999999 8888875
No 313
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.7e-37 Score=320.23 Aligned_cols=249 Identities=29% Similarity=0.453 Sum_probs=212.9
Q ss_pred cEEEEEeeccCceEEEEEEECCCC----CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTG----DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tg----k~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
+++.+.||.|+||.||+|++...+ ..||+|+++.... ......+..|+.++..++||||+++++.+.+.+..|+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 457789999999999999998766 8999999865432 2255788899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 667 VMEYLNGGDLYSLLRNLGC--LDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g~--LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
+|||+++++|.+++..... +++..+..++.||+.||+|||+.|++||||||+||+++.++.++|+|||+++......
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~- 157 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD- 157 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccc-
Confidence 9999999999999976544 9999999999999999999999999999999999999999999999999987411000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAE 823 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~ 823 (1013)
. .......+++.|+|||.+.+..++.++|+|||||++|+|++ |.+||...
T Consensus 158 -------------------~----------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~ 208 (258)
T smart00219 158 -------------------Y----------YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM 208 (258)
T ss_pred -------------------c----------cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 0 00001237889999999988889999999999999999998 89999988
Q ss_pred ChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
+.....+.+..... +..+..++.++.+++.+||..||.+|| ++.++++
T Consensus 209 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rp---t~~~ll~ 256 (258)
T smart00219 209 SNEEVLEYLKKGYR--LPKPENCPPEIYKLMLQCWAEDPEDRP---TFSELVE 256 (258)
T ss_pred CHHHHHHHHhcCCC--CCCCCcCCHHHHHHHHHHCcCChhhCc---CHHHHHh
Confidence 88888877766543 334566899999999999999999999 9999886
No 314
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=9.5e-38 Score=333.89 Aligned_cols=254 Identities=24% Similarity=0.374 Sum_probs=206.7
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCC--------------CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTG--------------DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRF 654 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tg--------------k~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL 654 (1013)
.+|++.+.||+|+||.||+|++..++ ..||+|+++... .......+.+|++++..++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 57999999999999999999875432 358999987532 23445678899999999999999999
Q ss_pred EeeeeccceEEEEEEeccCCChHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceee
Q 001783 655 FYSFTCRENLYLVMEYLNGGDLYSLLRNLG------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLI 722 (1013)
Q Consensus 655 ~e~fed~~~LyLVMEy~~GGSL~dlL~~~g------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILL 722 (1013)
++++......|+||||+++++|.+++.... .+++..+..++.||+.||+|||++|++||||||+|||+
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill 162 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV 162 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence 999999999999999999999999986432 36788899999999999999999999999999999999
Q ss_pred cCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccce
Q 001783 723 AHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTAD 802 (1013)
Q Consensus 723 d~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksD 802 (1013)
+.++.+||+|||++....... .........+++.|+|||++.+..++.++|
T Consensus 163 ~~~~~~kl~dfg~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 213 (295)
T cd05097 163 GNHYTIKIADFGMSRNLYSGD-----------------------------YYRIQGRAVLPIRWMAWESILLGKFTTASD 213 (295)
T ss_pred cCCCcEEecccccccccccCc-----------------------------ceeccCcCcCceeecChhhhccCCcCchhh
Confidence 999999999999986310000 000112235678899999999888999999
Q ss_pred eechhHHHHHHHh--CCCCCCCCChhHHHHhhhc-----cCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHH
Q 001783 803 WWSVGIILFELIV--GIPPFNAEHPQQIFDNILN-----RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1013)
Q Consensus 803 IWSLGVILYELLT--Gk~PF~g~~~~ei~qkIl~-----~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELL 875 (1013)
||||||++|+|++ |..||...+..+....+.. ....+...+..+++.+.+||.+||..||.+|| ++++|+
T Consensus 214 vwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RP---s~~~i~ 290 (295)
T cd05097 214 VWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRP---TFNKIH 290 (295)
T ss_pred HHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCc---CHHHHH
Confidence 9999999999998 6789988776666555432 11112233456789999999999999999999 888876
Q ss_pred h
Q 001783 876 Q 876 (1013)
Q Consensus 876 q 876 (1013)
+
T Consensus 291 ~ 291 (295)
T cd05097 291 H 291 (295)
T ss_pred H
Confidence 5
No 315
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.6e-37 Score=330.76 Aligned_cols=251 Identities=25% Similarity=0.435 Sum_probs=207.9
Q ss_pred CcEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~-----tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
+|++.+.||+|+||.||+|.+.. ....+|+|++..... ......+.+|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 48899999999999999998753 235789998865432 23456788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCce
Q 001783 665 YLVMEYLNGGDLYSLLRNL------------------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNL 720 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~------------------------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNI 720 (1013)
|+||||+.+|+|.+++... ..+++..+..++.|++.||+|||++||+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 9999999999999998642 2478889999999999999999999999999999999
Q ss_pred eecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCcc
Q 001783 721 LIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTT 800 (1013)
Q Consensus 721 LLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~k 800 (1013)
|+++++.+||+|||+++....... ........++..|+|||++.+..++.+
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~ 209 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDS-----------------------------YVKRSKGRIPVKWMAIESLFDHIYTTQ 209 (290)
T ss_pred EEcCCCcEEeccccccccccCccc-----------------------------hhcccCCCCCccccCHHHHccCCcchH
Confidence 999999999999999873110000 001112346778999999998889999
Q ss_pred ceeechhHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 801 ADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 801 sDIWSLGVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
+|||||||++|||++ |..||.+..+.++++.+... .. +..+..++.++.+||.+||+.+|.+|| ++.++++
T Consensus 210 ~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~i~~cl~~~P~~Rp---~~~~i~~ 281 (290)
T cd05045 210 SDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTG-YR-MERPENCSEEMYNLMLTCWKQEPDKRP---TFADISK 281 (290)
T ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-CC-CCCCCCCCHHHHHHHHHHccCCcccCC---CHHHHHH
Confidence 999999999999998 99999988887776655433 22 234667899999999999999999999 8888765
No 316
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-37 Score=339.36 Aligned_cols=258 Identities=23% Similarity=0.365 Sum_probs=212.8
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEECCC-------CCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEE
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTT-------GDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFF 655 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArdk~t-------gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~ 655 (1013)
+.....+|++.+.||+|+||.||+|++... +..||+|+++... .......+.+|+.++.++ +||||++++
T Consensus 7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 84 (334)
T cd05100 7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLL 84 (334)
T ss_pred cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeee
Confidence 334445799999999999999999987432 2368999887532 234557888999999999 799999999
Q ss_pred eeeeccceEEEEEEeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCc
Q 001783 656 YSFTCRENLYLVMEYLNGGDLYSLLRNLG----------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDN 719 (1013)
Q Consensus 656 e~fed~~~LyLVMEy~~GGSL~dlL~~~g----------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeN 719 (1013)
+.+.....+|++|||+++|+|.+++.+.. .++...+..++.||+.||.|||++||+||||||+|
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N 164 (334)
T cd05100 85 GACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARN 164 (334)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccce
Confidence 99999999999999999999999997532 36778888999999999999999999999999999
Q ss_pred eeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCc
Q 001783 720 LLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGT 799 (1013)
Q Consensus 720 ILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ 799 (1013)
||++.++.+||+|||+++...... .........++..|+|||++.+..++.
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~ 215 (334)
T cd05100 165 VLVTEDNVMKIADFGLARDVHNID-----------------------------YYKKTTNGRLPVKWMAPEALFDRVYTH 215 (334)
T ss_pred EEEcCCCcEEECCcccceeccccc-----------------------------ccccccCCCcCceEcCHHHhccCCcCc
Confidence 999999999999999987310000 000011234567899999999999999
Q ss_pred cceeechhHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 800 TADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 800 ksDIWSLGVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
++|||||||++|||++ |..||.+.+..+.+..+..... +..+..++.++.+||.+||+.+|.+|| ++.+++++
T Consensus 216 ~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp---s~~ell~~ 289 (334)
T cd05100 216 QSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHR--MDKPANCTHELYMIMRECWHAVPSQRP---TFKQLVED 289 (334)
T ss_pred hhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcccChhhCc---CHHHHHHH
Confidence 9999999999999998 8999998888887777655432 234567889999999999999999999 99999986
No 317
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=7.5e-38 Score=328.30 Aligned_cols=254 Identities=34% Similarity=0.588 Sum_probs=211.6
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEe
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy 670 (1013)
|++.+.||.|+||.||+|++..+++.||+|++.... ......+.+..|+.+++.++||||+++++++.+....|+||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 678899999999999999999999999999998654 2233346778899999999999999999999999999999999
Q ss_pred ccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 671 LNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 671 ~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
+++ +|.+++.+. ..+++..+..++.||+.||+|||++||+||||+|+||+++.++.++|+|||+++.....
T Consensus 80 ~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~------- 151 (282)
T cd07829 80 CDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIP------- 151 (282)
T ss_pred cCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCC-------
Confidence 974 999999876 57999999999999999999999999999999999999999999999999998731000
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCChhHH
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei 828 (1013)
........++..|+|||.+.+. .++.++|+|||||++|||++|.+||...+..+.
T Consensus 152 ------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~ 207 (282)
T cd07829 152 ------------------------LRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ 207 (282)
T ss_pred ------------------------ccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence 0011223567889999999876 789999999999999999999999988776555
Q ss_pred HHhhhcc------------------CCCCCC--------CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 829 FDNILNR------------------KIPWPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 829 ~qkIl~~------------------~~~~p~--------lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
+.++... ...++. ....++..+.++|.+||..||.+|| ++++++.||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp---~~~~~l~~p~~ 282 (282)
T cd07829 208 LFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRI---SAKEALKHPYF 282 (282)
T ss_pred HHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCC---CHHHHhhCcCC
Confidence 4444321 001111 1123578999999999999999999 99999999998
No 318
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.1e-37 Score=329.18 Aligned_cols=253 Identities=20% Similarity=0.311 Sum_probs=206.1
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCE----EEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDL----FAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~----VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~ 662 (1013)
..++|++++.||+|+||+||+|.+..++.. +++|++... ........+..|+.++..++||||+++++++. ..
T Consensus 5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~ 81 (279)
T cd05111 5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GA 81 (279)
T ss_pred CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CC
Confidence 347899999999999999999999877764 666766432 12334467778888999999999999999875 45
Q ss_pred eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 663 NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
..+++|||+++|+|.+++... +.+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 678999999999999999764 5789999999999999999999999999999999999999999999999999874110
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPF 820 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF 820 (1013)
... ........|+..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 162 ~~~-----------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~ 212 (279)
T cd05111 162 DDK-----------------------------KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPY 212 (279)
T ss_pred CCc-----------------------------ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCC
Confidence 000 001123457788999999998889999999999999999998 99999
Q ss_pred CCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.+.........+..... +..+..++.++.+++.+||..||.+|| ++.++++
T Consensus 213 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~c~~~~p~~Rp---s~~el~~ 263 (279)
T cd05111 213 AGMRPHEVPDLLEKGER--LAQPQICTIDVYMVMVKCWMIDENVRP---TFKELAN 263 (279)
T ss_pred CCCCHHHHHHHHHCCCc--CCCCCCCCHHHHHHHHHHcCCCcccCc---CHHHHHH
Confidence 88777665544433322 234456788999999999999999999 8998876
No 319
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=5.6e-38 Score=337.35 Aligned_cols=255 Identities=26% Similarity=0.408 Sum_probs=201.7
Q ss_pred CceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCCChHHHH
Q 001783 601 AFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLL 680 (1013)
Q Consensus 601 ~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL~dlL 680 (1013)
++|.||+++...+++.||+|+++.... .......+.+|+.+++.++||||++++++|...+..|++|||+++|+|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 556778888888999999999976532 3345678999999999999999999999999999999999999999999999
Q ss_pred Hhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccC
Q 001783 681 RNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLL 758 (1013)
Q Consensus 681 ~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~ 758 (1013)
.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||.+........ ..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~--~~---------- 158 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGK--RQ---------- 158 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccc--cc----------
Confidence 764 4589999999999999999999999999999999999999999999999998863211000 00
Q ss_pred CCCCcccchhhhhhhhhccccccCCCCCCCchhhcc--CCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhccC
Q 001783 759 GDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG--TGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRK 836 (1013)
Q Consensus 759 gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g--~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~~~ 836 (1013)
...........++..|+|||++.+ ..++.++|+|||||++|||++|..||................
T Consensus 159 ------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~ 226 (314)
T cd08216 159 ------------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGT 226 (314)
T ss_pred ------------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Confidence 000011234567889999999976 458899999999999999999999998755433322211110
Q ss_pred CC-------CC------------------------CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 837 IP-------WP------------------------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 837 ~~-------~p------------------------~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
.+ ++ .....++.++.+||.+||++||.+|| +++++++||||+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~ll~~p~~~~~ 301 (314)
T cd08216 227 VPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRP---SASQLLNHSFFKQC 301 (314)
T ss_pred CccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCc---CHHHHhcCchHhhh
Confidence 00 00 01123457899999999999999999 99999999999865
No 320
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.1e-37 Score=322.04 Aligned_cols=247 Identities=24% Similarity=0.362 Sum_probs=207.7
Q ss_pred EEeeccCceEEEEEEECC-CCC--EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEec
Q 001783 595 KPISRGAFGRVFLAKKRT-TGD--LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYL 671 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~-tgk--~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~ 671 (1013)
+.||+|+||.||+|.+.. .++ .||+|.+...... ...+.+.+|+.++++++||||+++++.+.. ..+|+||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 368999999999999865 333 6999999875432 566788999999999999999999999988 8899999999
Q ss_pred cCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 672 NGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 672 ~GGSL~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
++|+|.+++.+.. .+++..+..++.||+.||+|||++|++||||||+||+++.++.+||+|||+++.......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~----- 152 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED----- 152 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccccccccc-----
Confidence 9999999997754 689999999999999999999999999999999999999999999999999874110000
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhHH
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQI 828 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~~ei 828 (1013)
.........++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+.
T Consensus 153 -----------------------~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~ 209 (257)
T cd05040 153 -----------------------HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI 209 (257)
T ss_pred -----------------------ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 0001113467889999999999899999999999999999998 9999988887777
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
...+...... ...+..++..+.+++.+||+.+|.+|| ++.++++
T Consensus 210 ~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~~~~ 253 (257)
T cd05040 210 LKKIDKEGER-LERPEACPQDIYNVMLQCWAHNPADRP---TFAALRE 253 (257)
T ss_pred HHHHHhcCCc-CCCCccCCHHHHHHHHHHCCCCcccCC---CHHHHHH
Confidence 7776653332 234567889999999999999999999 8888875
No 321
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.3e-37 Score=334.48 Aligned_cols=255 Identities=27% Similarity=0.416 Sum_probs=214.4
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
..|...+.||+|+||.||+|+++.++..+|+|.+.............+.+|+.+++.++|+|++++++++......|+||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 44888899999999999999999999999999987543334445567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||+. |+|.+.+.. ...+++..+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++....
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~------- 166 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------- 166 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeec-------
Confidence 9997 588777754 4568999999999999999999999999999999999999999999999999886310
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc---CCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG---TGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g---~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
......|++.|+|||++.+ ..++.++|||||||++|+|++|..||...+
T Consensus 167 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 218 (308)
T cd06634 167 ----------------------------PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 218 (308)
T ss_pred ----------------------------CcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc
Confidence 0113468899999999853 457889999999999999999999998766
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
.......+.....+. .....++..+.+||.+||..+|.+|| +++++++||||...
T Consensus 219 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~P~~Rp---~~~~ll~~~~~~~~ 273 (308)
T cd06634 219 AMSALYHIAQNESPA-LQSGHWSEYFRNFVDSCLQKIPQDRP---TSEVLLKHRFVLRE 273 (308)
T ss_pred HHHHHHHHhhcCCCC-cCcccccHHHHHHHHHHhhCCcccCC---CHHHHhhCcccccc
Confidence 555554444433221 12346888999999999999999999 99999999999864
No 322
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.1e-37 Score=320.55 Aligned_cols=250 Identities=23% Similarity=0.403 Sum_probs=210.8
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
..+|++.+.||.|+||.||+|.+. .+..+|+|++...... ...+.+|+.+++.++||||+++++++......|+|
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence 367999999999999999999885 4678999998754321 24578899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|||+.+++|.+++... +.+++..++.++.|++.||+|||++|++||||||+||+++.++.++|+|||++.......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 154 (256)
T cd05112 78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ--- 154 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCc---
Confidence 9999999999999764 568999999999999999999999999999999999999999999999999986310000
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCCh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHP 825 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~ 825 (1013)
........++..|+|||++.+..++.++|||||||++|||++ |.+||.....
T Consensus 155 ---------------------------~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 207 (256)
T cd05112 155 ---------------------------YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN 207 (256)
T ss_pred ---------------------------ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 000112345678999999998889999999999999999998 9999998887
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
....+.+...... ..+...+..+.+|+.+||+.+|.+|| ++.+++++
T Consensus 208 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~Rp---~~~~~l~~ 254 (256)
T cd05112 208 SEVVETINAGFRL--YKPRLASQSVYELMQHCWKERPEDRP---SFSLLLHQ 254 (256)
T ss_pred HHHHHHHhCCCCC--CCCCCCCHHHHHHHHHHcccChhhCC---CHHHHHHh
Confidence 7777776554322 22445789999999999999999999 99999874
No 323
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.8e-37 Score=326.87 Aligned_cols=252 Identities=35% Similarity=0.521 Sum_probs=206.7
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccceEEEEEE
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~LyLVME 669 (1013)
|++.+.||.|+||+||+|....+++.||||.+...... .......+|+..+..++ ||||+++++.+...+..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 78899999999999999999989999999998754321 12234457889999999 9999999999999999999999
Q ss_pred eccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 670 YLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|+ +|+|.+++.... .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||+++.....
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~----- 152 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR----- 152 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC-----
Confidence 99 779999987754 7899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
.......|+..|+|||++.+ ..++.++|+||||+++|+|++|++||......
T Consensus 153 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~ 205 (283)
T cd07830 153 ---------------------------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEI 205 (283)
T ss_pred ---------------------------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChH
Confidence 00122468899999998854 45789999999999999999999999877665
Q ss_pred HHHHhhhccCC-------------------CCC--------CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCC
Q 001783 827 QIFDNILNRKI-------------------PWP--------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1013)
Q Consensus 827 ei~qkIl~~~~-------------------~~p--------~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPF 879 (1013)
+.+..+..... .++ ......+..+.+||++||+.||.+|| ++.|++.|||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp---t~~ei~~~~~ 282 (283)
T cd07830 206 DQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRP---TASQALQHPY 282 (283)
T ss_pred HHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCC---CHHHHhhCCC
Confidence 55444332100 000 01123368899999999999999999 9999999999
Q ss_pred C
Q 001783 880 F 880 (1013)
Q Consensus 880 F 880 (1013)
|
T Consensus 283 ~ 283 (283)
T cd07830 283 F 283 (283)
T ss_pred C
Confidence 8
No 324
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.2e-37 Score=342.98 Aligned_cols=259 Identities=27% Similarity=0.422 Sum_probs=206.7
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEE-----CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEee
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKK-----RTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYS 657 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArd-----k~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~ 657 (1013)
|....++|++.+.||+|+||+||+|++ ..+++.||||+++... .......+.+|+.+|..+ +||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA 79 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcce
Confidence 344557899999999999999999985 3567899999987542 233456788999999999 68999999988
Q ss_pred eecc-ceEEEEEEeccCCChHHHHHhc-----------------------------------------------------
Q 001783 658 FTCR-ENLYLVMEYLNGGDLYSLLRNL----------------------------------------------------- 683 (1013)
Q Consensus 658 fed~-~~LyLVMEy~~GGSL~dlL~~~----------------------------------------------------- 683 (1013)
+... ..+|+|||||++|+|.+++...
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 80 CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 7654 5689999999999999998642
Q ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 684 --------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 684 --------------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~------ 233 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP------ 233 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCc------
Confidence 136778888999999999999999999999999999999999999999999987311000
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhHH
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQI 828 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~~ei 828 (1013)
.........+++.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus 234 -----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 290 (343)
T cd05103 234 -----------------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 290 (343)
T ss_pred -----------------------chhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH
Confidence 0001112346778999999999999999999999999999997 9999977554333
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
+......... +..+...++++.+++.+||+.||.+|| ++.+|++|
T Consensus 291 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~cl~~~p~~Rp---s~~eil~~ 335 (343)
T cd05103 291 FCRRLKEGTR-MRAPDYTTPEMYQTMLDCWHGEPSQRP---TFSELVEH 335 (343)
T ss_pred HHHHHhccCC-CCCCCCCCHHHHHHHHHHccCChhhCc---CHHHHHHH
Confidence 3333322222 234556788999999999999999999 99999987
No 325
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.1e-37 Score=323.02 Aligned_cols=248 Identities=24% Similarity=0.409 Sum_probs=205.7
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.++|++.+.||+|+||.||+|.+..+ ..+|+|.+..... ..+.+.+|+.+++.++||||+++++++. .+..|+|
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIV 78 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEE
Confidence 36799999999999999999988654 4699998765432 2356788999999999999999998875 4568999
Q ss_pred EEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 668 MEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
|||+.+|+|.+++... ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++.......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~-- 156 (260)
T cd05069 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE-- 156 (260)
T ss_pred EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCc--
Confidence 9999999999999764 347899999999999999999999999999999999999999999999999987310000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEH 824 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~ 824 (1013)
........++..|+|||++.+..++.++|||||||++|+|++ |.+||.+..
T Consensus 157 ----------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 208 (260)
T cd05069 157 ----------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV 208 (260)
T ss_pred ----------------------------ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 000112346778999999998889999999999999999999 999999888
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
..+....+.... . +..+..++..+.+||.+||.+||.+|| +++++++
T Consensus 209 ~~~~~~~~~~~~-~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 255 (260)
T cd05069 209 NREVLEQVERGY-R-MPCPQGCPESLHELMKLCWKKDPDERP---TFEYIQS 255 (260)
T ss_pred HHHHHHHHHcCC-C-CCCCcccCHHHHHHHHHHccCCcccCc---CHHHHHH
Confidence 777777665432 2 234567899999999999999999999 8887765
No 326
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.2e-37 Score=325.93 Aligned_cols=253 Identities=23% Similarity=0.349 Sum_probs=199.5
Q ss_pred CCc-EEEEEeeccCceEEEEEEE----CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--
Q 001783 589 DDF-EIIKPISRGAFGRVFLAKK----RTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR-- 661 (1013)
Q Consensus 589 ddY-eIlk~LGkG~FGtVyLArd----k~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~-- 661 (1013)
++| ++++.||+|+||+||++.. ..++..||+|+++.... ......+.+|+++|+.++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 80 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG 80 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 345 9999999999999988753 35788999999875422 23446778999999999999999999987653
Q ss_pred ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
..+|+||||+++++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||+++....
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 468999999999999999976 4599999999999999999999999999999999999999999999999999873110
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
. . ..........++..|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 160 ~-~---------------------------~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~ 211 (283)
T cd05080 160 G-H---------------------------EYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQ 211 (283)
T ss_pred c-c---------------------------hhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCC
Confidence 0 0 00001112345677999999998889999999999999999999999986
Q ss_pred CCChh--HH------------HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 822 AEHPQ--QI------------FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 822 g~~~~--ei------------~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
..... +. ......... .+..+..++.++.+|+.+||+.||.+|| +++++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp---s~~~i~~ 276 (283)
T cd05080 212 SPPKKFEEMIGPKQGQMTVVRLIELLERGM-RLPCPKNCPQEVYILMKNCWETEAKFRP---TFRSLIP 276 (283)
T ss_pred CCcchhhhhhcccccccchhhhhhhhhcCC-CCCCCCCCCHHHHHHHHHHhccChhhCC---CHHHHHH
Confidence 43211 00 011111111 1223567889999999999999999999 8888875
No 327
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=6.7e-38 Score=342.15 Aligned_cols=264 Identities=31% Similarity=0.517 Sum_probs=212.0
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeecc--ceE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCR--ENL 664 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~--~~L 664 (1013)
.++|++.+.||.|+||.||+|.+..+++.||+|.+.+... .......+.+|+.++..+ +||||+++++++... ..+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4679999999999999999999998999999998865322 223345677899999999 999999999988654 368
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
|+||||+.+ +|..++.+. .+++..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|||+++.......
T Consensus 85 ~lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~ 162 (337)
T cd07852 85 YLVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE 162 (337)
T ss_pred EEEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence 999999975 999998765 789999999999999999999999999999999999999999999999999874211000
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
. ..........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 163 ~--------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~ 216 (337)
T cd07852 163 N--------------------------PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGT 216 (337)
T ss_pred c--------------------------ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCC
Confidence 0 00011223578999999998865 45789999999999999999999999876
Q ss_pred ChhHHHHhhhccC----------------------------CCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHH
Q 001783 824 HPQQIFDNILNRK----------------------------IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1013)
Q Consensus 824 ~~~ei~qkIl~~~----------------------------~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELL 875 (1013)
...+....+.... .........++.++.+||.+||+.||.+|| ++.+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp---s~~~il 293 (337)
T cd07852 217 STLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRL---TAEEAL 293 (337)
T ss_pred ChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCccccc---CHHHHh
Confidence 6554433332211 001112234789999999999999999999 999999
Q ss_pred hCCCCCCC
Q 001783 876 QHVFFKDI 883 (1013)
Q Consensus 876 qHPFFk~I 883 (1013)
+||||+..
T Consensus 294 ~~~~~~~~ 301 (337)
T cd07852 294 EHPYVAQF 301 (337)
T ss_pred hChhhhhh
Confidence 99999864
No 328
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.6e-37 Score=324.96 Aligned_cols=252 Identities=25% Similarity=0.371 Sum_probs=211.0
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCC----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGD----LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk----~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~ 663 (1013)
..+|++.+.||+|+||+||+|.++.+|. .+|+|++.+... ......+.+|+.++..++||||+++++++.. ..
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cc
Confidence 4679999999999999999999877665 589998876532 3455678899999999999999999998887 78
Q ss_pred EEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 664 LYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
.|+||||+++|+|.+++.+. +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 99999999999999999764 56999999999999999999999999999999999999999999999999998741100
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFN 821 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~ 821 (1013)
.. ........++..|+|||.+.+..++.++|+|||||++|||++ |..||.
T Consensus 163 ~~-----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 213 (279)
T cd05057 163 EK-----------------------------EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYE 213 (279)
T ss_pred cc-----------------------------ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCC
Confidence 00 000011234678999999988889999999999999999998 999999
Q ss_pred CCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
+....++...+..... ...+...+..+.+++.+||..||.+|| ++.++++
T Consensus 214 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~p~~Rp---~~~~l~~ 263 (279)
T cd05057 214 GIPAVEIPDLLEKGER--LPQPPICTIDVYMVLVKCWMIDAESRP---TFKELIN 263 (279)
T ss_pred CCCHHHHHHHHhCCCC--CCCCCCCCHHHHHHHHHHcCCChhhCC---CHHHHHH
Confidence 9888887777765432 233556889999999999999999999 7877764
No 329
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.4e-37 Score=329.81 Aligned_cols=254 Identities=23% Similarity=0.388 Sum_probs=204.6
Q ss_pred CCcEEEEEeeccCceEEEEEEECC----------------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCee
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRT----------------TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVV 652 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~----------------tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIV 652 (1013)
++|++.+.||+|+||+||+|++.. ++..||+|++.... .......+.+|+.+++.++||||+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcc
Confidence 579999999999999999996532 34579999987542 234456888999999999999999
Q ss_pred EEEeeeeccceEEEEEEeccCCChHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCcee
Q 001783 653 RFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG-----------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLL 721 (1013)
Q Consensus 653 kL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g-----------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNIL 721 (1013)
++++++...+.+|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 99999999999999999999999999997642 3667789999999999999999999999999999999
Q ss_pred ecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccc
Q 001783 722 IAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTA 801 (1013)
Q Consensus 722 Ld~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ks 801 (1013)
++.++.++|+|||+++....... ........+++.|+|||+..+..++.++
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~ 213 (296)
T cd05095 163 VGKNYTIKIADFGMSRNLYSGDY-----------------------------YRIQGRAVLPIRWMSWESILLGKFTTAS 213 (296)
T ss_pred EcCCCCEEeccCcccccccCCcc-----------------------------eeccCcCcCccccCCHHHHhcCCccchh
Confidence 99999999999999873110000 0011223456789999999888899999
Q ss_pred eeechhHHHHHHHh--CCCCCCCCChhHHHHhhhc-----cCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHH
Q 001783 802 DWWSVGIILFELIV--GIPPFNAEHPQQIFDNILN-----RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1013)
Q Consensus 802 DIWSLGVILYELLT--Gk~PF~g~~~~ei~qkIl~-----~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeEL 874 (1013)
|||||||++|||++ |..||...+..+....... ........+..++..+.+||.+||+.||.+|| ++.+|
T Consensus 214 DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~~i 290 (296)
T cd05095 214 DVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERP---SFQEI 290 (296)
T ss_pred hhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCC---CHHHH
Confidence 99999999999998 7899987766665543321 11111223456789999999999999999999 88877
Q ss_pred Hh
Q 001783 875 KQ 876 (1013)
Q Consensus 875 Lq 876 (1013)
++
T Consensus 291 ~~ 292 (296)
T cd05095 291 HA 292 (296)
T ss_pred HH
Confidence 64
No 330
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.1e-37 Score=324.53 Aligned_cols=232 Identities=31% Similarity=0.514 Sum_probs=193.6
Q ss_pred cCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCCChHHH
Q 001783 600 GAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSL 679 (1013)
Q Consensus 600 G~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL~dl 679 (1013)
|.||+||+|+++.+++.||+|.+.+.. ...+|...+....||||+++++.+...+..|+||||++||+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 899999999999999999999987643 123344555566799999999999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCC
Q 001783 680 LRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLG 759 (1013)
Q Consensus 680 L~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~g 759 (1013)
+.+.+.+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++....
T Consensus 76 l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~------------------- 136 (237)
T cd05576 76 ISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVE------------------- 136 (237)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccc-------------------
Confidence 9887789999999999999999999999999999999999999999999999999875210
Q ss_pred CCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhccCCCC
Q 001783 760 DEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPW 839 (1013)
Q Consensus 760 d~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~~~~~~ 839 (1013)
.......++..|+|||.+.+..++.++|+||+||++|||++|..||...... . .....
T Consensus 137 ---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~-----~~~~~- 194 (237)
T cd05576 137 ---------------DSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-I-----NTHTT- 194 (237)
T ss_pred ---------------cccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-c-----ccccc-
Confidence 0011235677899999998888999999999999999999999988643221 0 00111
Q ss_pred CCCCCCCCHHHHHHHHHhccCCcCCcCCC--CCHHHHHhCCCC
Q 001783 840 PRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFF 880 (1013)
Q Consensus 840 p~lp~~lS~elkDLI~rMLqkDPekRPg~--~TAeELLqHPFF 880 (1013)
..++..+++.+.+||.+||+.||.+|++. .+++++++||||
T Consensus 195 ~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 195 LNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 13456789999999999999999999954 246999999998
No 331
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.7e-37 Score=319.02 Aligned_cols=246 Identities=25% Similarity=0.352 Sum_probs=206.5
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GG 674 (1013)
++||.|+||.||+|.+.. ++.||+|++...... .....+.+|+.+++.++||||+++++++......|+||||+.|+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 368999999999999977 999999998765432 34567899999999999999999999999999999999999999
Q ss_pred ChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 675 DLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 675 SL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
+|.+++... ..+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 78 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~--------- 148 (251)
T cd05041 78 SLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY--------- 148 (251)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcc---------
Confidence 999999664 5689999999999999999999999999999999999999999999999999873100000
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhHHHHhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFDNI 832 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~~ei~qkI 832 (1013)
........++..|+|||++.+..++.++|||||||++|+|++ |..||...........+
T Consensus 149 --------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~ 208 (251)
T cd05041 149 --------------------TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERI 208 (251)
T ss_pred --------------------eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHH
Confidence 000011234667999999998889999999999999999999 89999888776666666
Q ss_pred hccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 833 LNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 833 l~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.... . ...+..++.++.+||.+||+.+|.+|| ++.++++.
T Consensus 209 ~~~~-~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~ell~~ 248 (251)
T cd05041 209 ESGY-R-MPAPQLCPEEIYRLMLQCWAYDPENRP---SFSEIYNE 248 (251)
T ss_pred hcCC-C-CCCCccCCHHHHHHHHHHhccChhhCc---CHHHHHHH
Confidence 5432 1 234567889999999999999999999 99999863
No 332
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=360.54 Aligned_cols=247 Identities=23% Similarity=0.414 Sum_probs=212.9
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~ 663 (1013)
|...++...-++-||.|+-|-||+|+.. ++.||||.++.- -..++.-|++|+||||+.+.+++.....
T Consensus 119 WeiPFe~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~el----------kETdIKHLRkLkH~NII~FkGVCtqsPc 186 (904)
T KOG4721|consen 119 WEIPFEEISELEWLGSGAQGAVFLGRLH--NETVAVKKVREL----------KETDIKHLRKLKHPNIITFKGVCTQSPC 186 (904)
T ss_pred ccCCHHHhhhhhhhccCcccceeeeecc--CceehhHHHhhh----------hhhhHHHHHhccCcceeeEeeeecCCce
Confidence 4555666777788999999999999874 688999976521 1256778999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
+|||||||..|.|..+|+....++......|..+|+.|+.|||.+.|||||||.-||||..+..|||+|||.++..
T Consensus 187 yCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~---- 262 (904)
T KOG4721|consen 187 YCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKEL---- 262 (904)
T ss_pred eEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhh----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998731
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
......-+++||..|||||++.+.+.+.++|||||||+|||||||..||..-
T Consensus 263 ----------------------------~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdV 314 (904)
T KOG4721|consen 263 ----------------------------SDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDV 314 (904)
T ss_pred ----------------------------hhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCcccc
Confidence 0112234689999999999999999999999999999999999999999876
Q ss_pred ChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCC
Q 001783 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHV 878 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHP 878 (1013)
+...++--+-.+-..+ .+|..+++.++=||++||+..|..|| ++.+||.|-
T Consensus 315 dssAIIwGVGsNsL~L-pvPstcP~GfklL~Kqcw~sKpRNRP---SFrqil~Hl 365 (904)
T KOG4721|consen 315 DSSAIIWGVGSNSLHL-PVPSTCPDGFKLLLKQCWNSKPRNRP---SFRQILLHL 365 (904)
T ss_pred chheeEEeccCCcccc-cCcccCchHHHHHHHHHHhcCCCCCc---cHHHHHHHH
Confidence 6554443333333333 35788999999999999999999999 899999993
No 333
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-38 Score=358.17 Aligned_cols=256 Identities=28% Similarity=0.479 Sum_probs=206.2
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccceEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~LyLVM 668 (1013)
.|++++.||.||.++||++..- +.+.||+|.+... ..+...+..+.+|+.+|.+++ |.+||+||++-..++.+||||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 4999999999999999999874 4456666655432 235567889999999999995 899999999999999999999
Q ss_pred EeccCCChHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGC-LDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~-LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||=+ -||..+|.+... ++...+++|..|++.|+.++|..||||.||||.|+|+- .|.+||+|||+|.....+.+
T Consensus 440 E~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT--- 514 (677)
T KOG0596|consen 440 ECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT--- 514 (677)
T ss_pred eccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcccc---
Confidence 9764 499999987644 45468999999999999999999999999999999985 47999999999984222211
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC-----------CCccceeechhHHHHHHHhC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG-----------HGTTADWWSVGIILFELIVG 816 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~-----------ys~ksDIWSLGVILYELLTG 816 (1013)
.-...+.+||+.||+||.+.... .+.++||||||||||+|+.|
T Consensus 515 --------------------------sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYg 568 (677)
T KOG0596|consen 515 --------------------------SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYG 568 (677)
T ss_pred --------------------------ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhc
Confidence 11234679999999999997543 35789999999999999999
Q ss_pred CCCCCCCC-hhHHHHhhhcc--CCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 817 IPPFNAEH-PQQIFDNILNR--KIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 817 k~PF~g~~-~~ei~qkIl~~--~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
++||..-. ...-+..|..- ..+||.++... ++.++++.||.+||.+|| ++.+||+|||+.-+
T Consensus 569 ktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~--~li~~mK~CL~rdPkkR~---si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 569 KTPFGQIINQIAKLHAITDPNHEIEFPDIPEND--ELIDVMKCCLARDPKKRW---SIPELLQHPFLQIQ 633 (677)
T ss_pred CCchHHHHHHHHHHHhhcCCCccccccCCCCch--HHHHHHHHHHhcCcccCC---CcHHHhcCcccccc
Confidence 99996533 33334444443 33566665543 499999999999999999 99999999999853
No 334
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=5.7e-37 Score=317.50 Aligned_cols=245 Identities=25% Similarity=0.390 Sum_probs=204.7
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCC
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GG 674 (1013)
++||.|+||.||+|... ++..||+|++.... .......+.+|+.+++.++||||+++++.+......|+||||++++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 36899999999999864 68899999987542 2334457889999999999999999999999999999999999999
Q ss_pred ChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001783 675 DLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1013)
Q Consensus 675 SL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~ 753 (1013)
+|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++...... .
T Consensus 78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~-~--------- 147 (250)
T cd05085 78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG-I--------- 147 (250)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccc-c---------
Confidence 999998754 46899999999999999999999999999999999999999999999999998631000 0
Q ss_pred CcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhHHHHhh
Q 001783 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFDNI 832 (1013)
Q Consensus 754 gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~~ei~qkI 832 (1013)
........+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+
T Consensus 148 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~ 207 (250)
T cd05085 148 --------------------YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQV 207 (250)
T ss_pred --------------------cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence 000112244678999999998889999999999999999998 99999888777776666
Q ss_pred hccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 833 LNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 833 l~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
..... ...+..++..+.+|+.+||..+|.+|| ++.++++.
T Consensus 208 ~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~~ 247 (250)
T cd05085 208 EKGYR--MSCPQKCPDDVYKVMQRCWDYKPENRP---KFSELQKE 247 (250)
T ss_pred HcCCC--CCCCCCCCHHHHHHHHHHcccCcccCC---CHHHHHHH
Confidence 54322 244567899999999999999999999 88888763
No 335
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=394.28 Aligned_cols=259 Identities=36% Similarity=0.611 Sum_probs=223.4
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+++-...||.|.||.||-|.+..+|...|+|-++..... ......+.+|..+|..++|||+|++|++=...+.+||.||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 466677899999999999999999999999998765544 5566788899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
||.||+|.+++...+..+|...+.|..|++.||.|||+.|||||||||+||+++.+|-+|++|||.|+....+ ..+
T Consensus 1315 yC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~-~~~--- 1390 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN-AQT--- 1390 (1509)
T ss_pred HhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCc-hhc---
Confidence 9999999999998888999999999999999999999999999999999999999999999999999842111 100
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc---CCCCccceeechhHHHHHHHhCCCCCCC-CCh
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG---TGHGTTADWWSVGIILFELIVGIPPFNA-EHP 825 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g---~~ys~ksDIWSLGVILYELLTGk~PF~g-~~~ 825 (1013)
+ .......+|||.|||||++.+ .++..+.|||||||++.||.||+.||.. ++.
T Consensus 1391 ---------------~--------~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne 1447 (1509)
T KOG4645|consen 1391 ---------------M--------PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE 1447 (1509)
T ss_pred ---------------C--------CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch
Confidence 0 112346799999999999986 5678899999999999999999999965 444
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCC
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk 881 (1013)
..+...+..+.. |.+|+.+|++.+|||.+||+.||++|+ ++.||+.|-|=+
T Consensus 1448 ~aIMy~V~~gh~--Pq~P~~ls~~g~dFle~Cl~~dP~~Rw---~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1448 WAIMYHVAAGHK--PQIPERLSSEGRDFLEHCLEQDPKMRW---TASQLLEHAFGK 1498 (1509)
T ss_pred hHHHhHHhccCC--CCCchhhhHhHHHHHHHHHhcCchhhh---HHHHHHHhhccc
Confidence 445445444433 677888999999999999999999999 999999998765
No 336
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=362.19 Aligned_cols=254 Identities=28% Similarity=0.438 Sum_probs=224.7
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
-|.-++.||.|+||-||.|++..+...||||.+.-+.-...+.-..++.|+.+|..++|||+|.+.++|..+...|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 37788999999999999999999999999999986655556667899999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 670 YLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 670 y~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
||-| +-.+++.-. .++.+..+..|..+.+.||.|||+.+.||||||..|||+++.|.|||+|||.|...
T Consensus 107 YClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~--------- 176 (948)
T KOG0577|consen 107 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM--------- 176 (948)
T ss_pred HHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhc---------
Confidence 9965 777777432 57999999999999999999999999999999999999999999999999998631
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc---CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG---TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g---~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
...++++|||.||||||+.. ..|+-++||||||++..||...+||+...+.
T Consensus 177 --------------------------~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA 230 (948)
T KOG0577|consen 177 --------------------------APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 230 (948)
T ss_pred --------------------------CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH
Confidence 12357899999999999974 5699999999999999999999999988888
Q ss_pred hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 826 ~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
...+..|..+..|-.. ...+|..++.|+..||++-|.+|| |.+++|.|+|...-
T Consensus 231 MSALYHIAQNesPtLq-s~eWS~~F~~Fvd~CLqKipqeRp---tse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 231 MSALYHIAQNESPTLQ-SNEWSDYFRNFVDSCLQKIPQERP---TSEELLKHRFVLRE 284 (948)
T ss_pred HHHHHHHHhcCCCCCC-CchhHHHHHHHHHHHHhhCcccCC---cHHHHhhcchhccC
Confidence 8888888776654322 457899999999999999999999 99999999998653
No 337
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=9.5e-37 Score=319.38 Aligned_cols=250 Identities=22% Similarity=0.377 Sum_probs=207.1
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEE
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~Ly 665 (1013)
...++|++.+.||+|+||.||+|.+. .+..+|+|++.... ...+.+.+|+.+++.++|+||+++++.+.. ...|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~ 76 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIY 76 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh----hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeE
Confidence 34578999999999999999999864 45679999887532 235678899999999999999999999887 7889
Q ss_pred EEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 666 LVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
++|||+++++|.+++.+. ..++...+..++.||+.||.|||+.|++||||||+||+++.++.+||+|||++.... ..
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~-~~ 155 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE-DN 155 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeecc-CC
Confidence 999999999999999763 357888999999999999999999999999999999999999999999999986310 00
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g 822 (1013)
. ........++..|+|||++.+..++.++|+|||||++|+|++ |.+||.+
T Consensus 156 ~-----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~ 206 (260)
T cd05073 156 E-----------------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 206 (260)
T ss_pred C-----------------------------cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCC
Confidence 0 000112346678999999998889999999999999999998 9999998
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.+.......+.... . ...+...+.++.+++.+||+.+|.+|| ++.++++
T Consensus 207 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~l~~ 255 (260)
T cd05073 207 MSNPEVIRALERGY-R-MPRPENCPEELYNIMMRCWKNRPEERP---TFEYIQS 255 (260)
T ss_pred CCHHHHHHHHhCCC-C-CCCcccCCHHHHHHHHHHcccCcccCc---CHHHHHH
Confidence 87777666655432 2 223467889999999999999999999 7777654
No 338
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=6.3e-37 Score=321.84 Aligned_cols=252 Identities=27% Similarity=0.400 Sum_probs=209.0
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTT---GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~t---gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
.++|.+.+.||+|+||.||+|.+... ...||+|.+.... .....+.+.+|+.+++.++||||+++++++.+ ...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCc
Confidence 35699999999999999999987644 3478999876532 23455688999999999999999999998875 457
Q ss_pred EEEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g-~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
|+||||+++|+|.+++.+.+ .+++..+..++.||+.||+|||++|++||||||+|||++.++.++|+|||+++......
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 89999999999999997643 58999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g 822 (1013)
........+++.|+|||.+.+..++.++|||||||++|||++ |..||..
T Consensus 162 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~ 211 (270)
T cd05056 162 ------------------------------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQG 211 (270)
T ss_pred ------------------------------ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCC
Confidence 000112235678999999988889999999999999999996 9999988
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.+..+....+..... +..+..++..+.+||.+||..+|.+|| ++.+++..
T Consensus 212 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~~~~~ 261 (270)
T cd05056 212 VKNNDVIGRIENGER--LPMPPNCPPTLYSLMTKCWAYDPSKRP---RFTELKAQ 261 (270)
T ss_pred CCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 877776666654432 235678899999999999999999999 88888764
No 339
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=5.1e-37 Score=319.79 Aligned_cols=243 Identities=26% Similarity=0.450 Sum_probs=205.1
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
.+++|++.+.||+|+||.||++. .+++.||+|+++... ....+.+|+.++..++||||+++++++... ..|+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred cHHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence 45789999999999999999986 468889999986532 235788999999999999999999988754 5799
Q ss_pred EEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCC
Q 001783 667 VMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
||||+.+++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||++.....
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~--- 152 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSM--- 152 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccc---
Confidence 999999999999997653 489999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAE 823 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~ 823 (1013)
......++..|+|||.+.+..++.++|+|||||++|+|++ |.+||...
T Consensus 153 -------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 201 (254)
T cd05083 153 -------------------------------GVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM 201 (254)
T ss_pred -------------------------------cCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC
Confidence 0011233567999999998889999999999999999997 99999988
Q ss_pred ChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 824 ~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
+..+....+..... +..+..++..+.+||.+||+.+|.+|| ++.+++.
T Consensus 202 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~ 249 (254)
T cd05083 202 SLKEVKECVEKGYR--MEPPEGCPADVYVLMTSCWETEPKKRP---SFHKLRE 249 (254)
T ss_pred CHHHHHHHHhCCCC--CCCCCcCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 87777666654322 234567899999999999999999999 8888765
No 340
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=369.58 Aligned_cols=256 Identities=28% Similarity=0.477 Sum_probs=211.4
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEee-eecc-----
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYS-FTCR----- 661 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~-fed~----- 661 (1013)
..++|.+.|.+|||+.||+|++...|..||+|.+-.. .+...+.+.+|+++|+.|+ |+|||.+++. ....
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 3588999999999999999999888899999987654 5677889999999999997 9999999983 2221
Q ss_pred -ceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCCCceeecCCCcEEEeecCCc
Q 001783 662 -ENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLR--VVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1013)
Q Consensus 662 -~~LyLVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~G--IIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1013)
-.++|.||||.||.|-++|... ..|++.++..|+.|+++|+.+||... |||||||-|||||..+|+.||||||.|
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 2478999999999999999743 56999999999999999999999988 999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc---cCCCCccceeechhHHHHHH
Q 001783 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL---GTGHGTTADWWSVGIILFEL 813 (1013)
Q Consensus 737 k~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~---g~~ys~ksDIWSLGVILYEL 813 (1013)
.......+ ....+. ..+ ..-...-|+.|+|||++. +.+.+.++|||||||+||-|
T Consensus 194 tt~~~~~~----------------~~~e~~---~ve---~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkL 251 (738)
T KOG1989|consen 194 TTKILSPT----------------SAQEVN---YVE---EEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKL 251 (738)
T ss_pred ccccCCCc----------------cHHHHH---HHH---HHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHH
Confidence 73111100 000000 001 111235789999999974 67889999999999999999
Q ss_pred HhCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 814 IVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 814 LTGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
+....||..... -.|++..+.+|.. ...+..+++||+.||+.||.+|| ++-+++.+
T Consensus 252 Cy~t~PFe~sg~----laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~~RP---nI~Qv~~~ 307 (738)
T KOG1989|consen 252 CYFTTPFEESGK----LAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPDERP---NIYQVLEE 307 (738)
T ss_pred HHhCCCcCcCcc----eeEEeccccCCCC-ccHHHHHHHHHHHHhccCcccCC---CHHHHHHH
Confidence 999999976533 3688889988875 46899999999999999999999 88887765
No 341
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.4e-37 Score=326.43 Aligned_cols=249 Identities=31% Similarity=0.517 Sum_probs=205.2
Q ss_pred EEEEEeeccCceEEEEEEEC----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 592 EIIKPISRGAFGRVFLAKKR----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 592 eIlk~LGkG~FGtVyLArdk----~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.+.+.||.|+||.||+|.+. ..+..|+||+++.. ......+.+.+|++++.+++||||+++++++...+.+++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccc
Confidence 56789999999999999987 44668999999542 2344578899999999999999999999999988889999
Q ss_pred EEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 668 MEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
||||++|+|.+++... ..+++.....++.||+.||.|||+++|+|+||+++|||++.++.+||+|||++.......
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~-- 157 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS-- 157 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS--
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 9999999999999886 679999999999999999999999999999999999999999999999999987410000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEH 824 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~ 824 (1013)
.........+...|+|||++.+..++.++||||||+++|||++ |+.||...+
T Consensus 158 ---------------------------~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~ 210 (259)
T PF07714_consen 158 ---------------------------KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD 210 (259)
T ss_dssp ---------------------------SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC
T ss_pred ---------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0011123356678999999998889999999999999999999 789999888
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
..++...+..... +..+..++..+.++|.+||..||.+|| ++.+|++
T Consensus 211 ~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~C~~~~p~~RP---s~~~i~~ 257 (259)
T PF07714_consen 211 NEEIIEKLKQGQR--LPIPDNCPKDIYSLIQQCWSHDPEKRP---SFQEILQ 257 (259)
T ss_dssp HHHHHHHHHTTEE--TTSBTTSBHHHHHHHHHHT-SSGGGS-----HHHHHH
T ss_pred ccccccccccccc--ceeccchhHHHHHHHHHHcCCChhhCc---CHHHHHh
Confidence 8888888754433 345677899999999999999999999 8998875
No 342
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=9.6e-37 Score=322.10 Aligned_cols=253 Identities=21% Similarity=0.319 Sum_probs=209.5
Q ss_pred cCCcEEEEEeeccCceEEEEEEECC----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec-cc
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRT----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC-RE 662 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~----tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed-~~ 662 (1013)
-++|++.+.||+|+||.||+|.+.. ++..|++|++... ........+.+|..+++.++||||+++++++.. ..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 3679999999999999999999876 3578999988643 234556788999999999999999999997665 56
Q ss_pred eEEEEEEeccCCChHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecC
Q 001783 663 NLYLVMEYLNGGDLYSLLRNL--------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFG 734 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~--------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFG 734 (1013)
..++++||+++|+|..++... ..+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g 162 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNA 162 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCC
Confidence 789999999999999998653 358999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHH
Q 001783 735 LSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELI 814 (1013)
Q Consensus 735 LAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELL 814 (1013)
+++....... ........++..|+|||++.+..++.++|||||||++||++
T Consensus 163 ~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~ 213 (280)
T cd05043 163 LSRDLFPMDY-----------------------------HCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELM 213 (280)
T ss_pred CcccccCCce-----------------------------EEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHh
Confidence 9873111000 00001234567899999999988999999999999999999
Q ss_pred h-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 815 V-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 815 T-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
+ |++||...+..++...+.... .+ ..+..+++++.+++.+||..||++|| ++.++++
T Consensus 214 ~~g~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~~~~ 271 (280)
T cd05043 214 TLGQTPYVEIDPFEMAAYLKDGY-RL-AQPINCPDELFAVMACCWALDPEERP---SFSQLVQ 271 (280)
T ss_pred cCCCCCcCcCCHHHHHHHHHcCC-CC-CCCCcCCHHHHHHHHHHcCCChhhCC---CHHHHHH
Confidence 8 999999887777666555432 22 23456789999999999999999999 8888875
No 343
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=7.7e-37 Score=324.61 Aligned_cols=253 Identities=24% Similarity=0.351 Sum_probs=202.2
Q ss_pred cEEEEEeeccCceEEEEEEE----CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--ceE
Q 001783 591 FEIIKPISRGAFGRVFLAKK----RTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENL 664 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArd----k~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~--~~L 664 (1013)
|++++.||+|+||.||+|+. +.++..||+|.++... .......+.+|+.+++.++||||+++++++... ...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 89999999999999999984 4578899999986542 234456789999999999999999999988875 578
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
|+||||++|++|.+++.+. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++......
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 9999999999999999664 458999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~ 823 (1013)
. .........|+..|+|||++.+..++.++|||||||++|||+++..|+...
T Consensus 164 ~----------------------------~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~ 215 (284)
T cd05079 164 E----------------------------YYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSP 215 (284)
T ss_pred c----------------------------ceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccc
Confidence 0 000112345778899999999888999999999999999999987765321
Q ss_pred Ch--------------hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 824 HP--------------QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 824 ~~--------------~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.. ............. ...+..++..+.+||.+||+.||.+|| ++.+++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~il~~ 279 (284)
T cd05079 216 MTLFLKMIGPTHGQMTVTRLVRVLEEGKR-LPRPPNCPEEVYQLMRKCWEFQPSKRT---TFQNLIEG 279 (284)
T ss_pred cchhhhhcccccccccHHHHHHHHHcCcc-CCCCCCCCHHHHHHHHHHccCCcccCc---CHHHHHHH
Confidence 10 0111111111112 224567899999999999999999999 99998874
No 344
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.8e-37 Score=348.86 Aligned_cols=260 Identities=26% Similarity=0.360 Sum_probs=212.7
Q ss_pred CCCcccCCcEEEEEeeccCceEEEEEEEC-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEe
Q 001783 583 KDRTSIDDFEIIKPISRGAFGRVFLAKKR-----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFY 656 (1013)
Q Consensus 583 k~~~~lddYeIlk~LGkG~FGtVyLArdk-----~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e 656 (1013)
.+....++|.+.+.||+|+||.||+|++. .+++.||+|+++... .....+.+.+|+.+|..+. ||||+++++
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~ 108 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLG 108 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence 45666778999999999999999999964 345689999997643 2333457889999999997 999999999
Q ss_pred eeeccceEEEEEEeccCCChHHHHHhcC----------------------------------------------------
Q 001783 657 SFTCRENLYLVMEYLNGGDLYSLLRNLG---------------------------------------------------- 684 (1013)
Q Consensus 657 ~fed~~~LyLVMEy~~GGSL~dlL~~~g---------------------------------------------------- 684 (1013)
++.....+|+|||||++|+|.+++++.+
T Consensus 109 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
T cd05107 109 ACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD 188 (401)
T ss_pred EEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence 9999999999999999999999996532
Q ss_pred ----------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCC
Q 001783 685 ----------------------------------------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPD 718 (1013)
Q Consensus 685 ----------------------------------------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPe 718 (1013)
.++...+..++.||+.||+|||+.||+||||||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~ 268 (401)
T cd05107 189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAAR 268 (401)
T ss_pred ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcc
Confidence 2566778889999999999999999999999999
Q ss_pred ceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCC
Q 001783 719 NLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHG 798 (1013)
Q Consensus 719 NILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys 798 (1013)
|||++.++.+||+|||+++....... ........|++.|||||++.+..++
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~ 319 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSN-----------------------------YISKGSTFLPLKWMAPESIFNNLYT 319 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccc-----------------------------cccCCCcCCCCceeChHHhcCCCCC
Confidence 99999999999999999873110000 0011234678899999999988899
Q ss_pred ccceeechhHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 799 TTADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 799 ~ksDIWSLGVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.++|||||||++|||++ |..||......+.....+..... +..+..++.++.+||.+||+.+|.+|| ++.+|++.
T Consensus 320 ~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~l~~li~~cl~~~P~~RP---s~~ell~~ 395 (401)
T cd05107 320 TLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYR-MAKPAHASDEIYEIMQKCWEEKFEIRP---DFSQLVHL 395 (401)
T ss_pred cHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCChhHCc---CHHHHHHH
Confidence 99999999999999998 89999876555554444433322 234667899999999999999999999 88888864
No 345
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1e-36 Score=320.07 Aligned_cols=247 Identities=23% Similarity=0.339 Sum_probs=194.7
Q ss_pred EEeeccCceEEEEEEECC--CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEecc
Q 001783 595 KPISRGAFGRVFLAKKRT--TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLN 672 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~--tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~ 672 (1013)
+.||+|+||+||+|.... ....+|+|.+.... .......+.+|+.+++.++||||+++++.+.....+|+||||++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 358999999999997532 34578888765432 23345678899999999999999999999999999999999999
Q ss_pred CCChHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 673 GGDLYSLLRNLG-----CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 673 GGSL~dlL~~~g-----~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
+|+|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~---- 154 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED---- 154 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccch----
Confidence 999999997642 24678889999999999999999999999999999999999999999999986310000
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-------CCCCccceeechhHHHHHHHh-CCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-------TGHGTTADWWSVGIILFELIV-GIPP 819 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-------~~ys~ksDIWSLGVILYELLT-Gk~P 819 (1013)
.........+++.|+|||++.. ..++.++|||||||++|||++ |.+|
T Consensus 155 -------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p 209 (269)
T cd05042 155 -------------------------YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQP 209 (269)
T ss_pred -------------------------heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCC
Confidence 0000122356788999999753 356889999999999999999 8899
Q ss_pred CCCCChhHHHHhhhccC-CC--CCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 820 FNAEHPQQIFDNILNRK-IP--WPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 820 F~g~~~~ei~qkIl~~~-~~--~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
|......+....+.... .. .+..+..++..+.+++..|+ .||.+|| ++++|++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rp---t~~~v~~ 265 (269)
T cd05042 210 YPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRP---TAEEVHE 265 (269)
T ss_pred CCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCccccc---CHHHHHH
Confidence 98777666655544332 22 23345578899999999998 4999999 7777765
No 346
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-37 Score=355.70 Aligned_cols=265 Identities=30% Similarity=0.462 Sum_probs=228.5
Q ss_pred CCCCCCCCCcccCCcEEEEEeeccCceEEEEEEECCCCC---E-EEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCee
Q 001783 577 SPIHPSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGD---L-FAIKVLKKADMIRKNAVESILAERDILISVRNPFVV 652 (1013)
Q Consensus 577 sp~~P~k~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk---~-VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIV 652 (1013)
.|+....|....++-.+.++||+|+||.||+|+.+..+. . ||+|..+.........+..+++|.++|+.++|||||
T Consensus 145 ~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVV 224 (474)
T KOG0194|consen 145 RPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVV 224 (474)
T ss_pred ccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEE
Confidence 455566788888998899999999999999999875432 3 899998865555677889999999999999999999
Q ss_pred EEEeeeeccceEEEEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEe
Q 001783 653 RFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLT 731 (1013)
Q Consensus 653 kL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g-~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLi 731 (1013)
++|++......+|||||+|+||+|.++|++.+ .++..+...++.+.+.||+|||++++|||||-.+|+|++.++.+||+
T Consensus 225 r~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKIS 304 (474)
T KOG0194|consen 225 RFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKIS 304 (474)
T ss_pred EEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeC
Confidence 99999999999999999999999999999886 49999999999999999999999999999999999999999999999
Q ss_pred ecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHH
Q 001783 732 DFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILF 811 (1013)
Q Consensus 732 DFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILY 811 (1013)
|||+++.+..... ......-...|+|||.+...-|++++||||+||++|
T Consensus 305 DFGLs~~~~~~~~-------------------------------~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~ 353 (474)
T KOG0194|consen 305 DFGLSRAGSQYVM-------------------------------KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLW 353 (474)
T ss_pred ccccccCCcceee-------------------------------ccccccCcceecChhhhccCccccccchhheeeeEE
Confidence 9999985210000 000112356899999999999999999999999999
Q ss_pred HHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 812 ELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 812 ELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
|+++ |..||.+....++..+|....++.+ .+...+.++..++.+|+..||++|| ++.++.+
T Consensus 354 Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~-~~~~~p~~~~~~~~~c~~~~p~~R~---tm~~i~~ 415 (474)
T KOG0194|consen 354 EIFENGAEPYPGMKNYEVKAKIVKNGYRMP-IPSKTPKELAKVMKQCWKKDPEDRP---TMSTIKK 415 (474)
T ss_pred eeeccCCCCCCCCCHHHHHHHHHhcCccCC-CCCCCHHHHHHHHHHhccCChhhcc---CHHHHHH
Confidence 9998 8899999999999999977665543 4667889999999999999999999 6666654
No 347
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=6.1e-37 Score=320.57 Aligned_cols=245 Identities=26% Similarity=0.440 Sum_probs=202.4
Q ss_pred EeeccCceEEEEEEECCCC------CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 596 PISRGAFGRVFLAKKRTTG------DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 596 ~LGkG~FGtVyLArdk~tg------k~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
.||+|+||.||+|+++... +.+|+|.+.+.. .......+.+|+.+++.++||||+++++++......|+|||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 5899999999999986544 689999886532 12345678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC-----cEEEeecCCcc
Q 001783 670 YLNGGDLYSLLRNL-------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-----HIKLTDFGLSK 737 (1013)
Q Consensus 670 y~~GGSL~dlL~~~-------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG-----~VKLiDFGLAk 737 (1013)
|++|++|.+++.+. ..+++..+..++.||+.||.|||++|++|+||||+||+++.++ .++|+|||+++
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 99999999999642 3478899999999999999999999999999999999999887 89999999987
Q ss_pred ccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-C
Q 001783 738 VGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-G 816 (1013)
Q Consensus 738 ~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G 816 (1013)
...... .........++..|+|||++.+..++.++|||||||++|+|++ |
T Consensus 160 ~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g 210 (269)
T cd05044 160 DIYKSD-----------------------------YYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLG 210 (269)
T ss_pred cccccc-----------------------------ccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcC
Confidence 311000 0001112356788999999999889999999999999999998 9
Q ss_pred CCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 817 IPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 817 k~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
..||...+..+....+..... +..+..++..+.+||.+||..+|.+|| +++++++
T Consensus 211 ~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 265 (269)
T cd05044 211 QQPYPALNNQEVLQHVTAGGR--LQKPENCPDKIYQLMTNCWAQDPSERP---TFDRIQE 265 (269)
T ss_pred CCCCcccCHHHHHHHHhcCCc--cCCcccchHHHHHHHHHHcCCCcccCC---CHHHHHH
Confidence 999988777776666544321 234567889999999999999999999 8888765
No 348
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.8e-37 Score=323.56 Aligned_cols=237 Identities=23% Similarity=0.389 Sum_probs=194.5
Q ss_pred EeeccCceEEEEEEECCCCC-------EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 596 PISRGAFGRVFLAKKRTTGD-------LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 596 ~LGkG~FGtVyLArdk~tgk-------~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
.||.|+||+||+|.++.++. .||+|++.... ....+.+.+|..+++.++||||+++++++......++||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 68999999999999866544 38888875432 344567888999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCc--------EEEeecCCcccc
Q 001783 669 EYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGH--------IKLTDFGLSKVG 739 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g-~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~--------VKLiDFGLAk~~ 739 (1013)
||+++|+|..++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.++. ++|+|||++...
T Consensus 79 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 79 EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred ecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 9999999999997654 5899999999999999999999999999999999999987765 689999987521
Q ss_pred ccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhC-C
Q 001783 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVG-I 817 (1013)
Q Consensus 740 ~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG-k 817 (1013)
. ......|++.|+|||++.+ ..++.++|||||||++|+|++| .
T Consensus 159 ~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~ 203 (258)
T cd05078 159 L-----------------------------------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGD 203 (258)
T ss_pred C-----------------------------------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCC
Confidence 0 0112468889999999987 4579999999999999999998 5
Q ss_pred CCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 818 PPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 818 ~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
+||.......... +..... .++...+.++.+||.+||+.||.+|| +++++++.
T Consensus 204 ~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~~ 256 (258)
T cd05078 204 KPLSALDSQKKLQ-FYEDRH---QLPAPKWTELANLINQCMDYEPDFRP---SFRAIIRD 256 (258)
T ss_pred CChhhccHHHHHH-HHHccc---cCCCCCcHHHHHHHHHHhccChhhCC---CHHHHHHh
Confidence 7776655544332 222222 34556778999999999999999999 99999874
No 349
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-38 Score=362.50 Aligned_cols=244 Identities=34% Similarity=0.558 Sum_probs=210.5
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCCeeEEEeeeeccceEE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~-L~HPNIVkL~e~fed~~~Ly 665 (1013)
..++|++...+|.|+||.|-.+.+..+++.+++|++.+.. ....+|+.++.. -+||||+++++.+.+..+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 3567999999999999999999999999999999998752 223456655544 47999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceee-cCCCcEEEeecCCccccccCCC
Q 001783 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLI-AHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILL-d~dG~VKLiDFGLAk~~~~~s~ 744 (1013)
+|||++.|+-|.+.+...+.+. ..+..|++||+.|+.|||++|||||||||+|||+ +..|+++|+|||.++..
T Consensus 393 ~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~----- 466 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSEL----- 466 (612)
T ss_pred eeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhC-----
Confidence 9999999999999998776665 8888999999999999999999999999999999 68999999999998731
Q ss_pred CCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 745 ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
+....+.|-|..|.|||++...+|+.+|||||||++||+||+|+.||....
T Consensus 467 -----------------------------~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P 517 (612)
T KOG0603|consen 467 -----------------------------ERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHP 517 (612)
T ss_pred -----------------------------chhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCC
Confidence 000224577889999999999999999999999999999999999997655
Q ss_pred hh-HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 825 PQ-QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 825 ~~-ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
.. ++..+|.. +.+...+|.+++|||++||+.||.+|| ++.+++.||||
T Consensus 518 ~~~ei~~~i~~-----~~~s~~vS~~AKdLl~~LL~~dP~~Rl---~~~~i~~h~w~ 566 (612)
T KOG0603|consen 518 AGIEIHTRIQM-----PKFSECVSDEAKDLLQQLLQVDPALRL---GADEIGAHPWF 566 (612)
T ss_pred chHHHHHhhcC-----CccccccCHHHHHHHHHhccCChhhCc---ChhhhccCcch
Confidence 54 55555533 333478999999999999999999999 99999999999
No 350
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.3e-36 Score=316.83 Aligned_cols=249 Identities=24% Similarity=0.324 Sum_probs=199.8
Q ss_pred EEeeccCceEEEEEEECC---CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeee-ccceEEEEEEe
Q 001783 595 KPISRGAFGRVFLAKKRT---TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFT-CRENLYLVMEY 670 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~---tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fe-d~~~LyLVMEy 670 (1013)
+.||+|+||.||+|.+.. .+..||+|.+... ......+.+.+|+.+++.++||||+++++.+. .+...|+||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 368999999999998753 3457999987542 22345578889999999999999999999765 45568999999
Q ss_pred ccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 671 LNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 671 ~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
+.+|+|.+++.+. ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~----- 153 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY----- 153 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcc-----
Confidence 9999999999764 4567788889999999999999999999999999999999999999999999873110000
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhHH
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQI 828 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~~~ei 828 (1013)
. .........+++.|+|||.+.+..++.++|||||||++|||++ |.+||...+..+.
T Consensus 154 ---------------~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~ 211 (262)
T cd05058 154 ---------------Y-------SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDI 211 (262)
T ss_pred ---------------e-------eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 0 0000122356778999999998889999999999999999999 5778887777666
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 829 ~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
...+..... +..+..++..+.+++.+||..+|++|| ++.++++.
T Consensus 212 ~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~~il~~ 255 (262)
T cd05058 212 TVYLLQGRR--LLQPEYCPDPLYEVMLSCWHPKPEMRP---TFSELVSR 255 (262)
T ss_pred HHHHhcCCC--CCCCCcCCHHHHHHHHHHcCCChhhCC---CHHHHHHH
Confidence 666654432 234556789999999999999999999 88888763
No 351
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.5e-36 Score=321.30 Aligned_cols=253 Identities=28% Similarity=0.423 Sum_probs=200.3
Q ss_pred CCcEEEEEeeccCceEEEEEEE----CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec--cc
Q 001783 589 DDFEIIKPISRGAFGRVFLAKK----RTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC--RE 662 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArd----k~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed--~~ 662 (1013)
.+|++++.||+|+||+||+|.. ..++..||+|.+.... ....+.+.+|+.++..++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 4699999999999999999984 4578899999986542 3445678899999999999999999987644 34
Q ss_pred eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 663 NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
.+|+||||+++|+|.+++.+. +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 689999999999999999764 4689999999999999999999999999999999999999999999999999874110
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
. .. . ........++..|+|||++.+..++.++|||||||++|||++|..|+.
T Consensus 161 ~-~~------------------~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~ 212 (284)
T cd05081 161 D-KE------------------Y---------YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSC 212 (284)
T ss_pred C-Cc------------------c---------eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCC
Confidence 0 00 0 000111234556999999998889999999999999999999877764
Q ss_pred CCChhH---------------HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 822 AEHPQQ---------------IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 822 g~~~~e---------------i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
...... ....++..... +..+..++.++.+||.+||..+|++|| |+.+|++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rp---t~~ei~~ 278 (284)
T cd05081 213 SPPAEFMRMMGNDKQGQMIVYHLIELLKNNGR-LPAPPGCPAEIYAIMKECWNNDPSQRP---SFSELAL 278 (284)
T ss_pred CcchhhhhhcccccccccchHHHHHHHhcCCc-CCCCCCCCHHHHHHHHHHccCChhhCC---CHHHHHH
Confidence 322110 01112222222 223567889999999999999999999 9999876
No 352
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.1e-36 Score=318.38 Aligned_cols=247 Identities=25% Similarity=0.347 Sum_probs=194.7
Q ss_pred EEeeccCceEEEEEEEC--CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEecc
Q 001783 595 KPISRGAFGRVFLAKKR--TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLN 672 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk--~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~ 672 (1013)
+.||+|+||.||+|... .++..+|+|.++.... ......+.+|+.+++.++||||+++++.+.+...+|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 35899999999999864 3456799998865432 2334578889999999999999999999999999999999999
Q ss_pred CCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 673 GGDLYSLLRNL-----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 673 GGSL~dlL~~~-----g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
+|+|.+++... ..+++..+..++.|++.||+|||++||+||||||+||+++.++++||+|||+++..... .
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~---~- 154 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE---D- 154 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCc---c-
Confidence 99999999653 23567788899999999999999999999999999999999999999999998631000 0
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-------CCCccceeechhHHHHHHHh-CCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-------GHGTTADWWSVGIILFELIV-GIPP 819 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-------~ys~ksDIWSLGVILYELLT-Gk~P 819 (1013)
.........|++.|+|||++.+. .++.++|||||||++|||++ |.+|
T Consensus 155 -------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p 209 (269)
T cd05087 155 -------------------------YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQP 209 (269)
T ss_pred -------------------------eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCC
Confidence 00011234678899999998643 35789999999999999996 9999
Q ss_pred CCCCChhHHHHhhhcc-CC--CCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 820 FNAEHPQQIFDNILNR-KI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 820 F~g~~~~ei~qkIl~~-~~--~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
|......+........ .. +.+......++.+.+++.+|+ .+|.+|| ++++|+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp---t~~~l~~ 265 (269)
T cd05087 210 YRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRP---SAEEVHL 265 (269)
T ss_pred CCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCC---CHHHHHH
Confidence 9876665554433222 11 122333457889999999999 5899999 8888874
No 353
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.3e-36 Score=325.49 Aligned_cols=254 Identities=22% Similarity=0.337 Sum_probs=206.8
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCC----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGD----LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk----~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~ 662 (1013)
..++|++++.||+|+||.||+|.+..++. .||+|++.... .......+.+|+.+++.++||||+++++.+...
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~- 81 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP- 81 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence 34679999999999999999999987776 46888876532 233345688999999999999999999988754
Q ss_pred eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 663 NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
..++++||+++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 82 TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccC
Confidence 578999999999999999765 3689999999999999999999999999999999999999999999999999873110
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPF 820 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF 820 (1013)
.. .........++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 162 ~~-----------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~ 212 (303)
T cd05110 162 DE-----------------------------KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 212 (303)
T ss_pred cc-----------------------------cccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 00 0001112356788999999999999999999999999999997 99999
Q ss_pred CCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 821 ~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.+....+....+... ..+ ..+..++..+.+++.+||..+|++|| ++.++++.
T Consensus 213 ~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~li~~c~~~~p~~Rp---~~~~l~~~ 264 (303)
T cd05110 213 DGIPTREIPDLLEKG-ERL-PQPPICTIDVYMVMVKCWMIDADSRP---KFKELAAE 264 (303)
T ss_pred CCCCHHHHHHHHHCC-CCC-CCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 887665554444332 222 23456788999999999999999999 88888774
No 354
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.1e-36 Score=315.82 Aligned_cols=252 Identities=30% Similarity=0.532 Sum_probs=209.9
Q ss_pred CcEEEEEeeccCceEEEEEEECC-CCCEEEEEEeecccc-------ccHHHHHHHHHHHHHHHh-cCCCCeeEEEeeeec
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRT-TGDLFAIKVLKKADM-------IRKNAVESILAERDILIS-VRNPFVVRFFYSFTC 660 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~-tgk~VALKVlkk~~~-------~~~e~ie~~l~Ei~IL~~-L~HPNIVkL~e~fed 660 (1013)
+|++.+.||+|+||.||+|.+.. +++.+|+|.+..... ........+.+|+.++.. ++||||+++++.+..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48889999999999999999987 688999998864321 223445667788888875 799999999999999
Q ss_pred cceEEEEEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCC
Q 001783 661 RENLYLVMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1013)
Q Consensus 661 ~~~LyLVMEy~~GGSL~dlL~~----~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1013)
.+..|+||||++|++|.+++.. ...+++..++.++.|++.||.|||. .||+|+||||+|||++.++.++|+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999988743 3468999999999999999999996 7899999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh
Q 001783 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 736 Ak~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT 815 (1013)
+..... ........|+..|+|||++.+..++.++|+||||+++|+|++
T Consensus 161 ~~~~~~--------------------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~ 208 (269)
T cd08528 161 AKQKQP--------------------------------ESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCT 208 (269)
T ss_pred eeeccc--------------------------------ccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHh
Confidence 873100 001223568999999999998889999999999999999999
Q ss_pred CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 816 GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 816 Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
|++||...........+...... +.....+++.+.+||.+||+.||.+|| ++.++..+
T Consensus 209 g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rp---~~~e~~~~ 266 (269)
T cd08528 209 LQPPFYSTNMLSLATKIVEAVYE-PLPEGMYSEDVTDVITSCLTPDAEARP---DIIQVSAM 266 (269)
T ss_pred CCCcccccCHHHHHHHHhhccCC-cCCcccCCHHHHHHHHHHCCCCCccCC---CHHHHHHH
Confidence 99999887776666666554332 222336789999999999999999999 88887764
No 355
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.1e-36 Score=313.56 Aligned_cols=235 Identities=21% Similarity=0.312 Sum_probs=193.0
Q ss_pred EEeeccCceEEEEEEECCCC----------CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 595 KPISRGAFGRVFLAKKRTTG----------DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tg----------k~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
+.||+|+||.||+|.+..++ ..+++|++..... ....+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 36899999999999998776 3578887654321 15778899999999999999999999888 778
Q ss_pred EEEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC-------cEEEeecCCc
Q 001783 665 YLVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-------HIKLTDFGLS 736 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g-~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG-------~VKLiDFGLA 736 (1013)
|+||||+++|+|.+++...+ .++...+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||++
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 99999999999999998765 799999999999999999999999999999999999999887 8999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC--CCCccceeechhHHHHHHH
Q 001783 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT--GHGTTADWWSVGIILFELI 814 (1013)
Q Consensus 737 k~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~--~ys~ksDIWSLGVILYELL 814 (1013)
..... .....++..|+|||++.+. .++.++|||||||++|+|+
T Consensus 156 ~~~~~-----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~ 200 (259)
T cd05037 156 ITVLS-----------------------------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEIC 200 (259)
T ss_pred ccccc-----------------------------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHH
Confidence 73100 1123567789999999876 7899999999999999999
Q ss_pred h-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 815 V-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 815 T-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
+ |..||...+.......... ... .+......+.+||.+||..+|.+|| ++.++++
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~il~ 256 (259)
T cd05037 201 SNGEEPLSTLSSSEKERFYQD-QHR---LPMPDCAELANLINQCWTYDPTKRP---SFRAILR 256 (259)
T ss_pred hCCCCCcccCCchhHHHHHhc-CCC---CCCCCchHHHHHHHHHhccChhhCC---CHHHHHH
Confidence 9 6888877654433333221 111 1222347899999999999999999 8998876
No 356
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.6e-36 Score=316.95 Aligned_cols=254 Identities=25% Similarity=0.389 Sum_probs=204.7
Q ss_pred CCcEEEEEeeccCceEEEEEEEC----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec--cc
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKR----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC--RE 662 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk----~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed--~~ 662 (1013)
.+|++++.||+|+||.||+|... .++..||+|+++..... .....+.+|+.+++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 56889999999999999999864 34789999999765432 356788999999999999999999998877 56
Q ss_pred eEEEEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 663 NLYLVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~g-~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
..|+||||+++++|.+++.... .+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 7999999999999999997654 699999999999999999999999999999999999999999999999999874110
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
. .. .........++..|+|||.+.+..++.++|||||||++|||++|..||.
T Consensus 162 ~-~~---------------------------~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~ 213 (284)
T cd05038 162 D-KD---------------------------YYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQ 213 (284)
T ss_pred C-Cc---------------------------ceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcc
Confidence 0 00 0000112345567999999998889999999999999999999999986
Q ss_pred CCChhH--------------HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 822 AEHPQQ--------------IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 822 g~~~~e--------------i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
...... .....+.....++ .+..++.++.+|+.+||..+|.+|| ++.+|++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rp---t~~ei~~ 278 (284)
T cd05038 214 SPPAEFLRMIGIAQGQMIVTRLLELLKEGERLP-RPPSCPDEVYDLMKLCWEAEPQDRP---SFADLIL 278 (284)
T ss_pred cccchhccccccccccccHHHHHHHHHcCCcCC-CCccCCHHHHHHHHHHhccChhhCC---CHHHHHH
Confidence 543211 1122222222222 3456788999999999999999999 8888876
No 357
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.5e-36 Score=317.66 Aligned_cols=238 Identities=20% Similarity=0.291 Sum_probs=192.5
Q ss_pred EEeeccCceEEEEEEECC------------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc
Q 001783 595 KPISRGAFGRVFLAKKRT------------TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~------------tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~ 662 (1013)
+.||+|+||.||+|.... ....+|+|++.... ......+..|..++..++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 368999999999998532 22358888876532 334457788999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCc-------EEEeecC
Q 001783 663 NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGH-------IKLTDFG 734 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~-------VKLiDFG 734 (1013)
..++||||+++|+|..++.+. +.+++..+..++.||+.||+|||++||+||||||+|||++.++. ++++|||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 999999999999999988754 56899999999999999999999999999999999999987664 8999999
Q ss_pred CccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc-cCCCCccceeechhHHHHHH
Q 001783 735 LSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-GTGHGTTADWWSVGIILFEL 813 (1013)
Q Consensus 735 LAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~-g~~ys~ksDIWSLGVILYEL 813 (1013)
++.... ......|+..|+|||++. +..++.++|||||||++|||
T Consensus 158 ~~~~~~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el 202 (262)
T cd05077 158 IPITVL-----------------------------------SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEI 202 (262)
T ss_pred CCcccc-----------------------------------CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHH
Confidence 886310 011246788999999987 46689999999999999999
Q ss_pred H-hCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 814 I-VGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 814 L-TGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
+ +|..||......+... +...... .....+.++.+||.+||+.||.+|| ++.+|+++
T Consensus 203 ~~~~~~p~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~li~~cl~~dp~~Rp---~~~~il~~ 260 (262)
T cd05077 203 CYNGEIPLKDKTLAEKER-FYEGQCM---LVTPSCKELADLMTHCMNYDPNQRP---FFRAIMRD 260 (262)
T ss_pred HhCCCCCCCCcchhHHHH-HHhcCcc---CCCCChHHHHHHHHHHcCCChhhCc---CHHHHHHh
Confidence 8 5899998765544322 2222221 2233567899999999999999999 99999875
No 358
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3e-36 Score=316.03 Aligned_cols=252 Identities=21% Similarity=0.350 Sum_probs=205.4
Q ss_pred cEEEEEeeccCceEEEEEEEC---CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc-----
Q 001783 591 FEIIKPISRGAFGRVFLAKKR---TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE----- 662 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk---~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~----- 662 (1013)
|++.+.||+|+||.||+|.++ .+++.||||++.... ......+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 677889999999999999865 357899999987543 23345677889999999999999999999886532
Q ss_pred -eEEEEEEeccCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCC
Q 001783 663 -NLYLVMEYLNGGDLYSLLRNL------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1013)
Q Consensus 663 -~LyLVMEy~~GGSL~dlL~~~------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1013)
..++++||+.+|+|..++... ..++...+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 257899999999999887432 2478999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh
Q 001783 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 736 Ak~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT 815 (1013)
++....... ........+++.|++||.+.+..++.++|||||||++|+|++
T Consensus 160 ~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~ 210 (273)
T cd05074 160 SKKIYSGDY-----------------------------YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMT 210 (273)
T ss_pred cccccCCcc-----------------------------eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhh
Confidence 873110000 000112345678999999998889999999999999999999
Q ss_pred -CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 816 -GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 816 -Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
|.+||.+.+..+.+..+..... ...+...+..+.+++.+||..+|.+|| ++.+++++
T Consensus 211 ~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p~~Rp---s~~~~~~~ 268 (273)
T cd05074 211 RGQTPYAGVENSEIYNYLIKGNR--LKQPPDCLEDVYELMCQCWSPEPKCRP---SFQHLRDQ 268 (273)
T ss_pred CCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 8999988887777766655432 233456889999999999999999999 88888764
No 359
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-37 Score=357.15 Aligned_cols=253 Identities=25% Similarity=0.496 Sum_probs=218.5
Q ss_pred EEEEEeeccCceEEEEEEECCCCCEEEEEEeecccc-ccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce--EEEEE
Q 001783 592 EIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM-IRKNAVESILAERDILISVRNPFVVRFFYSFTCREN--LYLVM 668 (1013)
Q Consensus 592 eIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~-~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~--LyLVM 668 (1013)
+.-.+||+|+|-+||+|.+..+|..||--.++..+. ......+++..|+.+|+.|+||||+++|+++.+..+ +-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 445679999999999999999999998555443332 345567899999999999999999999999998765 88999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCCCceeecC-CCcEEEeecCCccccccCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLR--VVHRDLKPDNLLIAH-DGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~G--IIHRDIKPeNILLd~-dG~VKLiDFGLAk~~~~~s~d 745 (1013)
|++..|+|+.++++.+.++...++.|++||+.||.|||++. |||||||-+||+|+. .|.|||+|+|||++.
T Consensus 123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~------ 196 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL------ 196 (632)
T ss_pred ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHh------
Confidence 99999999999999999999999999999999999999885 999999999999976 599999999999841
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCC-CCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFN-AEH 824 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~-g~~ 824 (1013)
......+.+|||.|||||++. ..|+..+||||||++|.||.|+..||. ..+
T Consensus 197 ---------------------------r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n 248 (632)
T KOG0584|consen 197 ---------------------------RKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN 248 (632)
T ss_pred ---------------------------hccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC
Confidence 112234579999999999998 779999999999999999999999996 567
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
+.++|+++..+..|- .+..--.+++++||.+||.. ..+|| +|.|||+||||..-
T Consensus 249 ~AQIYKKV~SGiKP~-sl~kV~dPevr~fIekCl~~-~~~R~---sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 249 PAQIYKKVTSGIKPA-ALSKVKDPEVREFIEKCLAT-KSERL---SAKELLKDPFFDED 302 (632)
T ss_pred HHHHHHHHHcCCCHH-HhhccCCHHHHHHHHHHhcC-chhcc---CHHHHhhChhhccc
Confidence 889999998876531 12222368999999999998 89999 99999999999864
No 360
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.9e-36 Score=320.71 Aligned_cols=237 Identities=24% Similarity=0.349 Sum_probs=192.5
Q ss_pred EeeccCceEEEEEEECCC------------------------CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCe
Q 001783 596 PISRGAFGRVFLAKKRTT------------------------GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFV 651 (1013)
Q Consensus 596 ~LGkG~FGtVyLArdk~t------------------------gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNI 651 (1013)
.||+|+||.||+|....+ ...||+|++.... ......+.+|..+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCCCCCe
Confidence 589999999999975321 2358889886432 2344677889999999999999
Q ss_pred eEEEeeeeccceEEEEEEeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC----
Q 001783 652 VRFFYSFTCRENLYLVMEYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG---- 726 (1013)
Q Consensus 652 VkL~e~fed~~~LyLVMEy~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG---- 726 (1013)
+++++++......|+||||+++|+|..++.+ .+.+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccC
Confidence 9999999999999999999999999999865 46789999999999999999999999999999999999997644
Q ss_pred ---cEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccce
Q 001783 727 ---HIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTAD 802 (1013)
Q Consensus 727 ---~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksD 802 (1013)
.+||+|||++.... ......|+..|+|||++.+ ..++.++|
T Consensus 159 ~~~~~kl~d~g~~~~~~-----------------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~~D 203 (274)
T cd05076 159 TSPFIKLSDPGVSFTAL-----------------------------------SREERVERIPWIAPECVPGGNSLSTAAD 203 (274)
T ss_pred ccceeeecCCccccccc-----------------------------------cccccccCCcccCchhhcCCCCCCcHHH
Confidence 48999999875210 0012357788999999876 56899999
Q ss_pred eechhHHHHHHH-hCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 803 WWSVGIILFELI-VGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 803 IWSLGVILYELL-TGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
||||||++|||+ +|..||......+.... ..... ..+...++.+.+||.+||+.+|.+|| ++.+++++
T Consensus 204 v~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp---s~~~il~~ 272 (274)
T cd05076 204 KWSFGTTLLEICFDGEVPLKERTPSEKERF-YEKKH---RLPEPSCKELATLISQCLTYEPTQRP---SFRTILRD 272 (274)
T ss_pred HHHHHHHHHHHHhCCCCCccccChHHHHHH-HHhcc---CCCCCCChHHHHHHHHHcccChhhCc---CHHHHHHh
Confidence 999999999995 79999987766554332 22222 23345667899999999999999999 99999875
No 361
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=7.2e-36 Score=315.20 Aligned_cols=246 Identities=20% Similarity=0.310 Sum_probs=195.3
Q ss_pred EeeccCceEEEEEEECCCC--CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccC
Q 001783 596 PISRGAFGRVFLAKKRTTG--DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 596 ~LGkG~FGtVyLArdk~tg--k~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
.||+|+||+||+++....+ ..+++|.++... .....+.+.+|+.+++.++||||+++++.+......|+||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 5899999999999764332 345666655432 233457889999999999999999999999999999999999999
Q ss_pred CChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 674 GDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 674 GSL~dlL~~~----g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
|+|.+++.+. ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.++|+|||++.......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~------ 153 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED------ 153 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcch------
Confidence 9999999754 346777888999999999999999999999999999999999999999999876210000
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-------CCCCccceeechhHHHHHHHh-CCCCCC
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-------TGHGTTADWWSVGIILFELIV-GIPPFN 821 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-------~~ys~ksDIWSLGVILYELLT-Gk~PF~ 821 (1013)
........+|+..|+|||++.. ..++.++|||||||++|||++ |.+||.
T Consensus 154 -----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 210 (268)
T cd05086 154 -----------------------YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYS 210 (268)
T ss_pred -----------------------hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCC
Confidence 0011124578899999999853 245789999999999999997 678998
Q ss_pred CCChhHHHHhhhccCC---CCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 822 AEHPQQIFDNILNRKI---PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~---~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
..+..+.+..+..... ..+.++..+++.+.+++..|| .+|.+|| ++++|++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp---~~~~i~~ 264 (268)
T cd05086 211 HLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRA---TAEEVHR 264 (268)
T ss_pred CCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCC---CHHHHHH
Confidence 7777777776654322 123445568899999999999 5799999 8998875
No 362
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-37 Score=321.38 Aligned_cols=262 Identities=26% Similarity=0.385 Sum_probs=213.4
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc----
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE---- 662 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~---- 662 (1013)
.-++|++.+.||+|||+.||+++...++..||+|.+.... .+..+..++|++..++++||||++++++...+.
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence 3467999999999999999999999999999999987654 456788999999999999999999987765443
Q ss_pred -eEEEEEEeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCCCceeecCCCcEEEeecCC
Q 001783 663 -NLYLVMEYLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSLR--VVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1013)
Q Consensus 663 -~LyLVMEy~~GGSL~dlL~~~----g~LsE~~ar~Ia~QIL~ALeYLHs~G--IIHRDIKPeNILLd~dG~VKLiDFGL 735 (1013)
..||++.|...|+|.+.+.+. ..++|.++..|+.+|+.||++||+.. ++||||||.|||+.+.+.++|.|||.
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccC
Confidence 499999999999999999653 36999999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc---CCCCccceeechhHHHHH
Q 001783 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG---TGHGTTADWWSVGIILFE 812 (1013)
Q Consensus 736 Ak~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g---~~ys~ksDIWSLGVILYE 812 (1013)
+...... + ........-+.......|..|+|||.+.- ...+.++|||||||+||+
T Consensus 176 ~~~a~i~---------i-------------~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa 233 (302)
T KOG2345|consen 176 ATQAPIQ---------I-------------EGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYA 233 (302)
T ss_pred ccccceE---------e-------------echHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHH
Confidence 8742110 0 00111122233445568899999999864 446899999999999999
Q ss_pred HHhCCCCCCCCCh--hHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 813 LIVGIPPFNAEHP--QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 813 LLTGk~PF~g~~~--~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
|+.|..||...-. ..+.-.+.+....+|.-.. +|+.+.+||+.||+.||.+|| ++.+++.+
T Consensus 234 ~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~-yse~l~~lik~mlqvdP~qRP---~i~~ll~~ 296 (302)
T KOG2345|consen 234 MMFGESPFERIYQQGGSLALAVQNAQISIPNSSR-YSEALHQLIKSMLQVDPNQRP---TIPELLSK 296 (302)
T ss_pred HHHcCCcchHHhhcCCeEEEeeeccccccCCCCC-ccHHHHHHHHHHhcCCcccCC---CHHHHHHH
Confidence 9999999953211 1122334455666776444 899999999999999999999 99998875
No 363
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.5e-35 Score=318.72 Aligned_cols=256 Identities=14% Similarity=0.227 Sum_probs=191.8
Q ss_pred CCcEEEEEeeccCceEEEEEEECCC---CCEEEEEEeeccccccHHH--------HHHHHHHHHHHHhcCCCCeeEEEee
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTT---GDLFAIKVLKKADMIRKNA--------VESILAERDILISVRNPFVVRFFYS 657 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~t---gk~VALKVlkk~~~~~~e~--------ie~~l~Ei~IL~~L~HPNIVkL~e~ 657 (1013)
++|++.+.||+|+||+||+|++..+ +..+|+|+........... ......+...+..++|++|++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5799999999999999999999877 6778888754322110000 0112233344556789999999987
Q ss_pred eeccc----eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeec
Q 001783 658 FTCRE----NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDF 733 (1013)
Q Consensus 658 fed~~----~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDF 733 (1013)
+.... ..|++||++.. ++.+.+......++..++.++.||+.||+|||++||+||||||+|||++.++.++|+||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DF 170 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDY 170 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEc
Confidence 65543 45788888744 77777776666789999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHH
Q 001783 734 GLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFEL 813 (1013)
Q Consensus 734 GLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYEL 813 (1013)
|+|+....+.... ...........||+.|+|||++.+..++.++|||||||++|||
T Consensus 171 Gla~~~~~~~~~~------------------------~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el 226 (294)
T PHA02882 171 GIASHFIIHGKHI------------------------EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKW 226 (294)
T ss_pred CCceeeccCCccc------------------------ccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 9997421110000 0000112335799999999999999999999999999999999
Q ss_pred HhCCCCCCCCCh-hH--------HHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 814 IVGIPPFNAEHP-QQ--------IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 814 LTGk~PF~g~~~-~e--------i~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
++|.+||.+... .. ....+...... +..+++.+.+++..|+..+|.+|| +.++|++
T Consensus 227 ~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~rp---~~~~l~~ 291 (294)
T PHA02882 227 AGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIK----IKNANKFIYDFIECVTKLSYEEKP---DYDALIK 291 (294)
T ss_pred HhCCCCCCccccchHHHHHhHHHHHHHhhhhhhc----cCCCCHHHHHHHHHHHhCCCCCCC---CHHHHHH
Confidence 999999987632 21 22333322222 235688999999999999999999 8888765
No 364
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-37 Score=310.21 Aligned_cols=259 Identities=32% Similarity=0.558 Sum_probs=218.9
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
.+|.-+++||+|.||+||+|+++.++++||+|.++..+. .+......++|+-+|+.++|.|||++++....++.+-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 457778899999999999999999999999999876542 3334567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
|||.. +|..+... +|.++.+.++.++.|++.||.++|++++.|||+||.|+||+.+|.+||+|||+|+..-.
T Consensus 81 e~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgi------ 153 (292)
T KOG0662|consen 81 EFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGI------ 153 (292)
T ss_pred HHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCC------
Confidence 99965 88888765 47899999999999999999999999999999999999999999999999999983100
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHH-hCCCCCCCCCh
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELI-VGIPPFNAEHP 825 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELL-TGk~PF~g~~~ 825 (1013)
| -+-....+-|.+|.+|.++.|. -|+...|+||.|||+.|+. .|++.|.+.+.
T Consensus 154 ---------------p----------vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv 208 (292)
T KOG0662|consen 154 ---------------P----------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV 208 (292)
T ss_pred ---------------c----------eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH
Confidence 0 0112235779999999999984 5899999999999999998 49999999998
Q ss_pred hHHHHhhhccC-----CCCC------------CCC---------CCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCC
Q 001783 826 QQIFDNILNRK-----IPWP------------RVP---------EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1013)
Q Consensus 826 ~ei~qkIl~~~-----~~~p------------~lp---------~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPF 879 (1013)
.+...+|.... -.|| .+| +.++...+||++++|.-+|.+|+ +|++.++|||
T Consensus 209 ddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qri---saeaalqhpy 285 (292)
T KOG0662|consen 209 DDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRI---SAEAALQHPY 285 (292)
T ss_pred HHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCccccc---CHHHHhcCcc
Confidence 88888886521 1122 111 24566789999999999999999 9999999999
Q ss_pred CCCC
Q 001783 880 FKDI 883 (1013)
Q Consensus 880 Fk~I 883 (1013)
|.+.
T Consensus 286 f~d~ 289 (292)
T KOG0662|consen 286 FSDF 289 (292)
T ss_pred cccc
Confidence 9853
No 365
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-37 Score=337.64 Aligned_cols=254 Identities=30% Similarity=0.547 Sum_probs=208.5
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC--C----CeeEEEeeeecc
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN--P----FVVRFFYSFTCR 661 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~H--P----NIVkL~e~fed~ 661 (1013)
..+|++++.+|+|.||+|..|.+..++..||||+++.- ....+..+-|+++|.++.+ | -+|.+.++|.-.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 36799999999999999999999999999999998753 2345667789999999842 3 378888999999
Q ss_pred ceEEEEEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC---------------
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH--------------- 724 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~--------------- 724 (1013)
++.|||+|.+ |.++++++.+++ .++..+++.+++||+.+++|||+.+++|.||||+|||+.+
T Consensus 164 ghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 164 GHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred CceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999999998 669999998764 5899999999999999999999999999999999999842
Q ss_pred -----CCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCc
Q 001783 725 -----DGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGT 799 (1013)
Q Consensus 725 -----dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ 799 (1013)
+-.|+|+|||.|+.. .+...+.+.|..|+|||++++.+++.
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~----------------------------------~e~hs~iVsTRHYRAPEViLgLGwS~ 288 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFD----------------------------------HEHHSTIVSTRHYRAPEVILGLGWSQ 288 (415)
T ss_pred eccCCCcceEEEecCCccee----------------------------------ccCcceeeeccccCCchheeccCcCC
Confidence 235899999999841 01124568899999999999999999
Q ss_pred cceeechhHHHHHHHhCCCCCCCCChhH---HHHhhhc------------------cCCCCCCCC---------------
Q 001783 800 TADWWSVGIILFELIVGIPPFNAEHPQQ---IFDNILN------------------RKIPWPRVP--------------- 843 (1013)
Q Consensus 800 ksDIWSLGVILYELLTGk~PF~g~~~~e---i~qkIl~------------------~~~~~p~lp--------------- 843 (1013)
+|||||+||||+|+++|...|+.....+ +.+.|+. +...|++..
T Consensus 289 pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl 368 (415)
T KOG0671|consen 289 PCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPL 368 (415)
T ss_pred ccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccH
Confidence 9999999999999999999998766555 4444433 011111100
Q ss_pred -------CCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 844 -------EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 844 -------~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
...-.++.|||++||..||.+|+ |+.|+|.||||+..
T Consensus 369 ~~~~~~~d~e~~~LfDLl~~mL~fDP~~Ri---Tl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 369 KKYMLQDDLEHVQLFDLLRRMLEFDPARRI---TLREALSHPFFARL 412 (415)
T ss_pred HHHhccCcHHHhHHHHHHHHHHccCccccc---cHHHHhcCHHhhcC
Confidence 00123588999999999999999 99999999999864
No 366
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-36 Score=348.04 Aligned_cols=258 Identities=20% Similarity=0.329 Sum_probs=214.1
Q ss_pred CCCCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc
Q 001783 582 SKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR 661 (1013)
Q Consensus 582 ~k~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~ 661 (1013)
..|.+..++..+...||.|.||+||+|++- ..||||+++..... .+..+.|.+|+.++++-+|.||+-+.+++...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt-~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPT-PEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc---cceEEEEEecCCCC-HHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 456777788999999999999999999985 35999999887654 44789999999999999999999999999888
Q ss_pred ceEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccc
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1013)
.. .||+.+|.|-+|+.+++-. ..|.....+.|+.||++|+.|||.++|||||||..||++.+++.|||+||||+....
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT 539 (678)
T ss_pred ce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeee
Confidence 77 9999999999999999654 468899999999999999999999999999999999999999999999999987411
Q ss_pred cCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc---CCCCccceeechhHHHHHHHhCC
Q 001783 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG---TGHGTTADWWSVGIILFELIVGI 817 (1013)
Q Consensus 741 ~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g---~~ys~ksDIWSLGVILYELLTGk 817 (1013)
.. .+ ........|...|||||+++. .+|++.+||||||+++|||+||.
T Consensus 540 ~w---------------~g--------------~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~ 590 (678)
T KOG0193|consen 540 RW---------------SG--------------EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGE 590 (678)
T ss_pred ee---------------cc--------------ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCc
Confidence 10 00 011123457889999999975 56899999999999999999999
Q ss_pred CCCCCCChhHHHHhhhccC--CCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 818 PPFNAEHPQQIFDNILNRK--IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 818 ~PF~g~~~~ei~qkIl~~~--~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.||...+.++++-++-.+. .+......+++.++++|+..||.+++++|| ...+||.
T Consensus 591 lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP---~F~~il~ 648 (678)
T KOG0193|consen 591 LPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERP---LFPQLLS 648 (678)
T ss_pred CCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCc---cHHHHHH
Confidence 9999666666554443331 122233456888999999999999999999 6776665
No 367
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=322.18 Aligned_cols=259 Identities=29% Similarity=0.512 Sum_probs=217.1
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccceEE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~Ly 665 (1013)
.+++.+.+..||.|+.|.||+++.+.+|...|||.+.+.. ..+..++++..++++...+ .|+||+.|++|..+..++
T Consensus 90 dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~--Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~ 167 (391)
T KOG0983|consen 90 DINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVF 167 (391)
T ss_pred ChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC--CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHH
Confidence 4577888999999999999999999999999999998764 3455678888888877664 899999999999999999
Q ss_pred EEEEeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 666 LVMEYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
+.||.|.. -+..++++ .+.++|..+-.+..-++.||.||-. +||||||+||+|||+|..|+|||||||++-.. .+
T Consensus 168 IcMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrl-vd- 244 (391)
T KOG0983|consen 168 ICMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VD- 244 (391)
T ss_pred HHHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeeccccccee-ec-
Confidence 99999843 44455543 3679999999999999999999995 68999999999999999999999999998531 11
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc---CCCCccceeechhHHHHHHHhCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG---TGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g---~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
........|-+.|||||.+.- ..|+-.+||||||++++||.||..||
T Consensus 245 ------------------------------SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy 294 (391)
T KOG0983|consen 245 ------------------------------SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPY 294 (391)
T ss_pred ------------------------------ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCC
Confidence 011223478899999999964 45899999999999999999999999
Q ss_pred CCC-ChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 821 NAE-HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 821 ~g~-~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
.+. ...+++.++++...+......++|+.+.+|+..||++|+.+|| .-.++|+|||+...
T Consensus 295 ~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP---~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 295 KGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRP---KYNKLLEHPFIKRY 355 (391)
T ss_pred CCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCc---chHHHhcCcceeec
Confidence 874 4667888888866543333345899999999999999999999 89999999999854
No 368
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.2e-36 Score=367.71 Aligned_cols=273 Identities=30% Similarity=0.482 Sum_probs=208.8
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec-------
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC------- 660 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed------- 660 (1013)
+.+|+.++.||+||||.||+|+++-+|+.||||.+.... .......+.+|+.+|.+|+|||||++|.++.+
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 578999999999999999999999999999999987654 44556789999999999999999999843300
Q ss_pred --------------------------------------------------------------------------------
Q 001783 661 -------------------------------------------------------------------------------- 660 (1013)
Q Consensus 661 -------------------------------------------------------------------------------- 660 (1013)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------c--------ceEEEEEEeccCCChHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHh
Q 001783 661 ------------------------R--------ENLYLVMEYLNGGDLYSLLRNLGCL-DEDVARVYIAEVVLALEYLHS 707 (1013)
Q Consensus 661 ------------------------~--------~~LyLVMEy~~GGSL~dlL~~~g~L-sE~~ar~Ia~QIL~ALeYLHs 707 (1013)
+ ..+||-||||+.-.|.+++.++... ....++.+++||+.||.|+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh
Confidence 0 1269999999987777777765544 578899999999999999999
Q ss_pred CCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCC
Q 001783 708 LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYL 787 (1013)
Q Consensus 708 ~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~Ym 787 (1013)
+|||||||||.||+++.+++|||+|||+|+.............. ..+..-+ ......++.+||..|+
T Consensus 716 ~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~-~~~~~~g------------~~~~~~Ts~VGTalYv 782 (1351)
T KOG1035|consen 716 QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLS-FSTNRAG------------SNDGDLTSQVGTALYV 782 (1351)
T ss_pred CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccC-ccccccC------------CCCcccccccceeeee
Confidence 99999999999999999999999999999842110000000000 0000000 1112345689999999
Q ss_pred CchhhccCC---CCccceeechhHHHHHHHhCCCCCCCC-ChhHHHHhhhccCCCCC-CCCCCCCHHHHHHHHHhccCCc
Q 001783 788 APEILLGTG---HGTTADWWSVGIILFELIVGIPPFNAE-HPQQIFDNILNRKIPWP-RVPEEMSPEAHDLIDRFLTEDP 862 (1013)
Q Consensus 788 APEVL~g~~---ys~ksDIWSLGVILYELLTGk~PF~g~-~~~ei~qkIl~~~~~~p-~lp~~lS~elkDLI~rMLqkDP 862 (1013)
|||++.+.. |+.++|+||||+|++||+. ||... ....++.++.....+++ .+....-+....+|++||+.||
T Consensus 783 APEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP 859 (1351)
T KOG1035|consen 783 APELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDP 859 (1351)
T ss_pred cHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCC
Confidence 999998754 9999999999999999985 56532 33444555554444443 1122334567789999999999
Q ss_pred CCcCCCCCHHHHHhCCCCC
Q 001783 863 HQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 863 ekRPg~~TAeELLqHPFFk 881 (1013)
.+|| ||.|+|++.||-
T Consensus 860 ~kRP---tA~eLL~s~llp 875 (1351)
T KOG1035|consen 860 SKRP---TATELLNSELLP 875 (1351)
T ss_pred ccCC---CHHHHhhccCCC
Confidence 9999 999999999997
No 369
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.9e-36 Score=356.09 Aligned_cols=257 Identities=27% Similarity=0.432 Sum_probs=218.7
Q ss_pred cccCCcEEEEEeeccCceEEEEEEEC-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKR-----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC 660 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk-----~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed 660 (1013)
....+.+..+.||+|+||+||+|+.. .....||||.++... .......|.+|+++|..++|||||+|++++..
T Consensus 483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~ 560 (774)
T KOG1026|consen 483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCRE 560 (774)
T ss_pred echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc
Confidence 44567888999999999999999864 345689999998654 34466899999999999999999999999999
Q ss_pred cceEEEEEEeccCCChHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC
Q 001783 661 RENLYLVMEYLNGGDLYSLLRNL--------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG 726 (1013)
Q Consensus 661 ~~~LyLVMEy~~GGSL~dlL~~~--------------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG 726 (1013)
++.+|||+|||..|||.++|+.. +.|+..+...++.||+.|++||-++.+|||||-.+|+||.++-
T Consensus 561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENL 640 (774)
T ss_pred CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccce
Confidence 99999999999999999999643 1278899999999999999999999999999999999999999
Q ss_pred cEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeech
Q 001783 727 HIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSV 806 (1013)
Q Consensus 727 ~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSL 806 (1013)
.|||+||||++..+ +.|... ......-..+|||||.|+...|+.++||||+
T Consensus 641 ~VKIsDfGLsRdiY--ssDYYk---------------------------~~~~t~lPIRWMppEsIly~kFTteSDVWs~ 691 (774)
T KOG1026|consen 641 VVKISDFGLSRDIY--SSDYYK---------------------------VRGNTLLPIRWMPPESILYGKFTTESDVWSF 691 (774)
T ss_pred EEEecccccchhhh--hhhhhc---------------------------ccCCceeeeecCCHHHhhcCcccchhhhhhh
Confidence 99999999998421 111100 0011233568999999999999999999999
Q ss_pred hHHHHHHHh-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHH
Q 001783 807 GIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1013)
Q Consensus 807 GVILYELLT-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELL 875 (1013)
||+|||+++ |+.||++-+.+++++.|..+.. ...|+.+|.++.+|+..||+.+|.+||++..+...|
T Consensus 692 GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l--L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L 759 (774)
T KOG1026|consen 692 GVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL--LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRL 759 (774)
T ss_pred hhhhhhhhccccCcccccchHHHHHHHHcCCc--ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence 999999997 9999999999999999998876 457999999999999999999999999433333333
No 370
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.6e-37 Score=332.89 Aligned_cols=263 Identities=30% Similarity=0.524 Sum_probs=208.1
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCC----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec-cc
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGD----LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC-RE 662 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk----~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed-~~ 662 (1013)
+..|++++.||+|+||.||+|..+.++. .||||.++...- ....-....+|+.+++.++||||+.|..+|.. +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 4679999999999999999996655433 789999875421 12233567799999999999999999999988 77
Q ss_pred eEEEEEEeccCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC----CcEEEeec
Q 001783 663 NLYLVMEYLNGGDLYSLLRNL-----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD----GHIKLTDF 733 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~-----g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d----G~VKLiDF 733 (1013)
.++|++||.+. +|+.+|+-. ..++...++.++.||+.|+.|||++-|+||||||.|||+..+ |.|||+||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 89999999987 999998532 469999999999999999999999999999999999999887 89999999
Q ss_pred CCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHH
Q 001783 734 GLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFE 812 (1013)
Q Consensus 734 GLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYE 812 (1013)
|+|+... +.... -......+-|.+|+|||.+.| ..|+.++|+||+|||+.|
T Consensus 181 GlaR~~~-~plkp---------------------------l~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaE 232 (438)
T KOG0666|consen 181 GLARLFN-NPLKP---------------------------LASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAE 232 (438)
T ss_pred cHHHHhh-ccccc---------------------------cccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHH
Confidence 9998521 10000 011224678999999999998 458999999999999999
Q ss_pred HHhCCCCCCCCC---------hhHHHHhhhccC-----CCCCC---CC--------------------------CCCCHH
Q 001783 813 LIVGIPPFNAEH---------PQQIFDNILNRK-----IPWPR---VP--------------------------EEMSPE 849 (1013)
Q Consensus 813 LLTGk~PF~g~~---------~~ei~qkIl~~~-----~~~p~---lp--------------------------~~lS~e 849 (1013)
|||-.|.|.+.. ..+...+|++-. ..||. .| ..-++.
T Consensus 233 lLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~ 312 (438)
T KOG0666|consen 233 LLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPS 312 (438)
T ss_pred HHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCch
Confidence 999999997632 123344444311 11111 11 112456
Q ss_pred HHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 850 AHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 850 lkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
+.+|+.+||++||.+|+ ||+++++|+||...
T Consensus 313 a~~LL~klL~yDP~kRI---ta~qAleh~yF~~d 343 (438)
T KOG0666|consen 313 ALDLLQKLLTYDPIKRI---TAEQALEHPYFTED 343 (438)
T ss_pred HHHHHHHHhccCchhhc---cHHHHhcccccccC
Confidence 99999999999999999 99999999999864
No 371
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=9.9e-35 Score=293.10 Aligned_cols=243 Identities=48% Similarity=0.850 Sum_probs=207.9
Q ss_pred CceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCCChHHHH
Q 001783 601 AFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLL 680 (1013)
Q Consensus 601 ~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL~dlL 680 (1013)
+||.||+|.+..+++.+|+|++........ .+.+.+|+..++.++|+||+++++.+......+++|||+.+++|..++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 589999999998999999999976543221 578889999999999999999999999999999999999999999999
Q ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCC
Q 001783 681 RNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGD 760 (1013)
Q Consensus 681 ~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd 760 (1013)
.....++...+..++.+++.+|.|||+.||+|+||+|.||+++.++.++|+|||.+......
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~------------------ 140 (244)
T smart00220 79 KKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPG------------------ 140 (244)
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccc------------------
Confidence 87666999999999999999999999999999999999999999999999999998741100
Q ss_pred CCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC-CChhHHHHhhhccCCCC
Q 001783 761 EEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA-EHPQQIFDNILNRKIPW 839 (1013)
Q Consensus 761 ~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g-~~~~ei~qkIl~~~~~~ 839 (1013)
.......|+..|++||.+.+..++.++||||||+++|+|++|..||.. .......+.+.......
T Consensus 141 --------------~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~ 206 (244)
T smart00220 141 --------------GLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF 206 (244)
T ss_pred --------------cccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC
Confidence 012245688899999999988899999999999999999999999987 55555555555444332
Q ss_pred CCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 840 PRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 840 p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
......++.++.+++.+||..+|.+|| ++.++++||||
T Consensus 207 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~~~~~~~~ 244 (244)
T smart00220 207 PPPEWKISPEAKDLIRKLLVKDPEKRL---TAEEALQHPFF 244 (244)
T ss_pred ccccccCCHHHHHHHHHHccCCchhcc---CHHHHhhCCCC
Confidence 222222889999999999999999999 99999999997
No 372
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-35 Score=330.93 Aligned_cols=152 Identities=28% Similarity=0.479 Sum_probs=133.4
Q ss_pred chhhhcccCCCCCCCCCCCcccC--CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHH
Q 001783 567 EDDVVRSLRTSPIHPSKDRTSID--DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILI 644 (1013)
Q Consensus 567 Eee~l~sl~~sp~~P~k~~~~ld--dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~ 644 (1013)
+++-...|..+.|||+.++..+. +|.+.++||+|-|++||+|.+..+.++|||||++... ...+..+.|+.+|+
T Consensus 54 eqE~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----hYtEaAlDEIklL~ 129 (590)
T KOG1290|consen 54 EQEDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----HYTEAALDEIKLLQ 129 (590)
T ss_pred cccChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----HHHHHHHHHHHHHH
Confidence 45556789999999999998887 5999999999999999999999999999999998643 35567788999998
Q ss_pred hcC-----C---CCeeEEEeeeecc----ceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh-CC
Q 001783 645 SVR-----N---PFVVRFFYSFTCR----ENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHS-LR 709 (1013)
Q Consensus 645 ~L~-----H---PNIVkL~e~fed~----~~LyLVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs-~G 709 (1013)
+++ | .+||+|++.|... .|+|||+|++ |-+|..+|.+. +.++...++.|++||+.||.|||+ +|
T Consensus 130 ~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg 208 (590)
T KOG1290|consen 130 QVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECG 208 (590)
T ss_pred HHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcC
Confidence 873 3 3799999999764 5899999999 67999999764 569999999999999999999994 79
Q ss_pred eeecccCCCceeec
Q 001783 710 VVHRDLKPDNLLIA 723 (1013)
Q Consensus 710 IIHRDIKPeNILLd 723 (1013)
|||.||||+|||+.
T Consensus 209 IIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 209 IIHTDLKPENVLLC 222 (590)
T ss_pred ccccCCCcceeeee
Confidence 99999999999994
No 373
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.5e-34 Score=342.02 Aligned_cols=262 Identities=22% Similarity=0.328 Sum_probs=182.2
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCC----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEee---
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTT----GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYS--- 657 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~t----gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~--- 657 (1013)
....++|++.+.||+|+||+||+|++..+ +..||+|.+..... .+...++ .+....+.++..+...
T Consensus 128 ~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e--~l~~~~~~~~~~~~~~~~~ 200 (566)
T PLN03225 128 SFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE--RVRRACPNSCADFVYGFLE 200 (566)
T ss_pred CCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH--HHHhhchhhHHHHHHhhhc
Confidence 44668999999999999999999999988 89999998764321 1111111 1112222222222221
Q ss_pred ---eeccceEEEEEEeccCCChHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHHhCCeeecc
Q 001783 658 ---FTCRENLYLVMEYLNGGDLYSLLRNLGC--------------------LDEDVARVYIAEVVLALEYLHSLRVVHRD 714 (1013)
Q Consensus 658 ---fed~~~LyLVMEy~~GGSL~dlL~~~g~--------------------LsE~~ar~Ia~QIL~ALeYLHs~GIIHRD 714 (1013)
......++|||||+.+++|.+++..... ..+..+..++.||+.||+|||++||+|||
T Consensus 201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRD 280 (566)
T PLN03225 201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRD 280 (566)
T ss_pred ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCc
Confidence 2345679999999999999999865321 12345678999999999999999999999
Q ss_pred cCCCceeecC-CCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc
Q 001783 715 LKPDNLLIAH-DGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL 793 (1013)
Q Consensus 715 IKPeNILLd~-dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~ 793 (1013)
|||+|||++. ++.+||+|||+|+..... ........+||+.|||||++.
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~------------------------------~~~~~~~~~~t~~Y~APE~~~ 330 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVG------------------------------INYIPKEFLLDPRYAAPEQYI 330 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccc------------------------------cccCCcccccCCCccChHHhh
Confidence 9999999986 689999999999731000 001123468999999999775
Q ss_pred cCC----------------------CCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhc-cCCCC-----------
Q 001783 794 GTG----------------------HGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILN-RKIPW----------- 839 (1013)
Q Consensus 794 g~~----------------------ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~-~~~~~----------- 839 (1013)
... ++.++|||||||+||||+++..|+... ...+..++. ....+
T Consensus 331 ~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~ 408 (566)
T PLN03225 331 MSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSN--LIQFNRQLKRNDYDLVAWRKLVEPRA 408 (566)
T ss_pred ccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchH--HHHHHHHHHhcCCcHHHHHHhhcccc
Confidence 332 344669999999999999977665322 112222111 11000
Q ss_pred -CC------CCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhH
Q 001783 840 -PR------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTL 888 (1013)
Q Consensus 840 -p~------lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L 888 (1013)
+. ........+++||.+||++||.+|| |+.++|+||||.+..+..+
T Consensus 409 ~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~---ta~e~L~Hpff~~~~~~~~ 461 (566)
T PLN03225 409 SPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRI---SAKAALAHPYFDREGLLGL 461 (566)
T ss_pred chhhhhhhhhccccchHHHHHHHHHccCCcccCC---CHHHHhCCcCcCCCCcccc
Confidence 00 0111234567999999999999999 9999999999998776533
No 374
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=329.83 Aligned_cols=265 Identities=29% Similarity=0.487 Sum_probs=216.6
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccc----cccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc-ce
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKAD----MIRKNAVESILAERDILISVRNPFVVRFFYSFTCR-EN 663 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~----~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~-~~ 663 (1013)
++|-++.+||+|||+.||+|.+....++||+|+-.... ..+.+..++..+|.+|.+.|+||.||++|++|.-+ +.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 56999999999999999999999999999999864322 22345678899999999999999999999999754 56
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--CeeecccCCCceeecC---CCcEEEeecCCccc
Q 001783 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSL--RVVHRDLKPDNLLIAH---DGHIKLTDFGLSKV 738 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~--GIIHRDIKPeNILLd~---dG~VKLiDFGLAk~ 738 (1013)
+|-|+|||+|.+|..+++....+++..++.|+.||+.||.||.+. .|||-||||.|||+-. .|.|||+||||+++
T Consensus 543 FCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred ceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 999999999999999999999999999999999999999999975 5999999999999954 58899999999996
Q ss_pred cccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc----CCCCccceeechhHHHHHHH
Q 001783 739 GLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG----TGHGTTADWWSVGIILFELI 814 (1013)
Q Consensus 739 ~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g----~~ys~ksDIWSLGVILYELL 814 (1013)
...++.+ .+. ....+.-..||.+|++||.+.- ...+.++||||+|||+|.++
T Consensus 623 MdddSy~-----~vd-------------------GmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQCl 678 (775)
T KOG1151|consen 623 MDDDSYN-----SVD-------------------GMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCL 678 (775)
T ss_pred ccCCccC-----ccc-------------------ceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhh
Confidence 3222111 110 0122344689999999999863 23588999999999999999
Q ss_pred hCCCCCCCCCh-hHHHHh--hhc-cCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCC
Q 001783 815 VGIPPFNAEHP-QQIFDN--ILN-RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 815 TGk~PF~g~~~-~ei~qk--Il~-~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk 881 (1013)
.|+-||..... .++++. |++ ..+.||.- +-++.++++||++||++.-++|. ++.++..||||.
T Consensus 679 YGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~---DV~qLA~dpyll 745 (775)
T KOG1151|consen 679 YGRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRI---DVQQLACDPYLL 745 (775)
T ss_pred ccCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhh---hHHHHccCcccc
Confidence 99999976533 233222 222 34455543 45899999999999999999999 999999999996
No 375
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=324.32 Aligned_cols=251 Identities=29% Similarity=0.416 Sum_probs=195.7
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc-eEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE-NLYL 666 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~-~LyL 666 (1013)
.++|.--..||+|+||.||+|... +|..||||.+....... ...|.+|+.+|.+++|||+|+|+++|.+.+ +.+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~L 149 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLL 149 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEE
Confidence 367888889999999999999985 45899999876543221 345999999999999999999999999998 5999
Q ss_pred EEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 667 VMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLR---VVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~G---IIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
|+|||++|+|.+++.... .+++.....|+.+++.||+|||... ||||||||+|||+|.+.+.||+|||+|+.+..
T Consensus 150 VYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 150 VYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred EEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence 999999999999997764 8999999999999999999999743 99999999999999999999999999974211
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccc-cCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSA-VGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~-vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF 820 (1013)
. . ....+. .||.+|+|||.+.....+.++||||||++|.||+||+.|.
T Consensus 230 ~--~-----------------------------~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~ 278 (361)
T KOG1187|consen 230 G--D-----------------------------TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAV 278 (361)
T ss_pred c--c-----------------------------cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCccc
Confidence 0 0 001112 7999999999999888999999999999999999999888
Q ss_pred CCCC---h---hHHHHhhhccC-CC---CCCCC-CCCC--HH---HHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 821 NAEH---P---QQIFDNILNRK-IP---WPRVP-EEMS--PE---AHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 821 ~g~~---~---~ei~qkIl~~~-~~---~p~lp-~~lS--~e---lkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
.... . .+.....+... .. -|.+. ...+ .. +..+..+|++.+|.+|| +..++.+
T Consensus 279 d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP---~m~~Vv~ 347 (361)
T KOG1187|consen 279 DQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERP---TMSQVVK 347 (361)
T ss_pred CCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCc---CHHHHHH
Confidence 6432 1 11111111111 00 11222 2222 22 55667899999999999 6666543
No 376
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=8.7e-36 Score=336.03 Aligned_cols=265 Identities=29% Similarity=0.483 Sum_probs=222.4
Q ss_pred CCCCCCCCCcccCC-cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC------C
Q 001783 577 SPIHPSKDRTSIDD-FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN------P 649 (1013)
Q Consensus 577 sp~~P~k~~~~ldd-YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~H------P 649 (1013)
..||.+.++..++. |.+....|+|-||+|..|.+..-|..||||+|..... ..+.=+.|++||++|+. -
T Consensus 419 EGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~----M~KtGl~EleiLkKL~~AD~Edk~ 494 (752)
T KOG0670|consen 419 EGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV----MHKTGLKELEILKKLNDADPEDKF 494 (752)
T ss_pred cceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH----HhhhhhHHHHHHHHhhccCchhhh
Confidence 45677778877775 9999999999999999999999999999999987543 33445689999999963 4
Q ss_pred CeeEEEeeeeccceEEEEEEeccCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC
Q 001783 650 FVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG---CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG 726 (1013)
Q Consensus 650 NIVkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g---~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG 726 (1013)
|+++|+-.|...+|+|||+|.+. .+|.+++++.| .|....++.|+.|++.||..|-.+||+|.||||+|||++...
T Consensus 495 Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k 573 (752)
T KOG0670|consen 495 HCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESK 573 (752)
T ss_pred HHHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCc
Confidence 89999999999999999999985 49999998876 388889999999999999999999999999999999999864
Q ss_pred -cEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeec
Q 001783 727 -HIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWS 805 (1013)
Q Consensus 727 -~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWS 805 (1013)
.+||||||.|.....+ . .+.+.-+..|.|||+++|.+|++..|+||
T Consensus 574 ~iLKLCDfGSA~~~~en---------------------e------------itPYLVSRFYRaPEIiLG~~yd~~iD~WS 620 (752)
T KOG0670|consen 574 NILKLCDFGSASFASEN---------------------E------------ITPYLVSRFYRAPEIILGLPYDYPIDTWS 620 (752)
T ss_pred ceeeeccCccccccccc---------------------c------------ccHHHHHHhccCcceeecCcccCCcccee
Confidence 6899999998741110 0 11234456799999999999999999999
Q ss_pred hhHHHHHHHhCCCCCCCCChhHHHHhhhccCCCCCC--------------------------------------------
Q 001783 806 VGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPR-------------------------------------------- 841 (1013)
Q Consensus 806 LGVILYELLTGk~PF~g~~~~ei~qkIl~~~~~~p~-------------------------------------------- 841 (1013)
+||+||||+||+..|++.+..+++.-.+..+.+||.
T Consensus 621 vgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkd 700 (752)
T KOG0670|consen 621 VGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKD 700 (752)
T ss_pred eceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchh
Confidence 999999999999999999988888777765544442
Q ss_pred ----------CCC---CCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 842 ----------VPE---EMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 842 ----------lp~---~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
+|. .+-.++.+||.+||..||++|+ ++.++|+||||..
T Consensus 701 l~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRi---t~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 701 LGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRI---TVNQALKHPFITE 751 (752)
T ss_pred HHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcC---CHHHHhcCCcccC
Confidence 000 0124689999999999999999 9999999999974
No 377
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=342.31 Aligned_cols=257 Identities=32% Similarity=0.549 Sum_probs=221.8
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeec-----cc
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTC-----RE 662 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed-----~~ 662 (1013)
+-|+++.+||.|.+|+||+++++.+++..|+|++.... +..+.+..|.+||+.. .|||++.+|++|.- ++
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 55999999999999999999999999999999987543 2335667888898876 69999999998864 35
Q ss_pred eEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccc
Q 001783 663 NLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1013)
.++||||||.||+..+++++. ..+.|+.+..|+++++.||.+||.+.+||||||-.|||++.+|.|||+|||++...
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl- 173 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL- 173 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee-
Confidence 799999999999999999764 56999999999999999999999999999999999999999999999999998631
Q ss_pred cCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHHHHHHh
Q 001783 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 741 ~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLT 815 (1013)
.....++++.+|||.|||||++.. ..|+..+|+||||++..||-.
T Consensus 174 ------------------------------dsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIElad 223 (953)
T KOG0587|consen 174 ------------------------------DSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAE 223 (953)
T ss_pred ------------------------------ecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcC
Confidence 012345678899999999999964 347889999999999999999
Q ss_pred CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 816 GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 816 Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
|.+|+....+...+-.|-.+..+-..-|..+++++.+||..||.+|-.+|| +..++|+|||.++-
T Consensus 224 G~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP---~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 224 GAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRP---STEELLKHPFITEQ 288 (953)
T ss_pred CCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCc---chhhhccCCccccc
Confidence 999998888876666665554433344678999999999999999999999 99999999999843
No 378
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-34 Score=348.35 Aligned_cols=253 Identities=24% Similarity=0.406 Sum_probs=215.8
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCC-----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGD-----LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk-----~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~ 662 (1013)
-+..++.+.||+|+||.||.|....-.. .||+|.+++. .....+..|++|..+|+.++|||||++++++.+..
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~ 768 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG 768 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence 3568889999999999999998764322 4888887754 35667889999999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCC
Q 001783 663 NLYLVMEYLNGGDLYSLLRNL-------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~~-------g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1013)
..+|++|||.||||..+|++. ..++......++.||+.|++||+++++|||||..+|+|++....|||+|||+
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccch
Confidence 999999999999999999875 3489999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh
Q 001783 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 736 Ak~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT 815 (1013)
|+.. ...+.. +......-...|||||.+....++.++|||||||+|||++|
T Consensus 849 ArDi--y~~~yy---------------------------r~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifs 899 (1025)
T KOG1095|consen 849 ARDI--YDKDYY---------------------------RKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFS 899 (1025)
T ss_pred hHhh--hhchhe---------------------------eccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHh
Confidence 9831 111000 00000123458999999999999999999999999999998
Q ss_pred -CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 816 -GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 816 -Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
|..||.+.+..+++...+.+. . ...|..++..+.++|.+||+.+|++|| +...|++
T Consensus 900 lG~~PY~~~~n~~v~~~~~~gg-R-L~~P~~CP~~ly~lM~~CW~~~pe~RP---~F~~i~~ 956 (1025)
T KOG1095|consen 900 LGATPYPSRSNFEVLLDVLEGG-R-LDPPSYCPEKLYQLMLQCWKHDPEDRP---SFRTIVE 956 (1025)
T ss_pred CCCCCCCCcchHHHHHHHHhCC-c-cCCCCCCChHHHHHHHHHccCChhhCc---cHHHHHh
Confidence 999999999999988777765 3 345789999999999999999999999 7777776
No 379
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-35 Score=338.76 Aligned_cols=242 Identities=32% Similarity=0.480 Sum_probs=194.3
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc------e
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE------N 663 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~------~ 663 (1013)
-|..-+.||+||||.||+++++.+|+.||||.+++.. .....+...+|+++|++++|||||+++++=++.. .
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence 3777889999999999999999999999999998754 2344578889999999999999999998766544 4
Q ss_pred EEEEEEeccCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC--CC--cEEEeecCCc
Q 001783 664 LYLVMEYLNGGDLYSLLRNL---GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH--DG--HIKLTDFGLS 736 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~---g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~--dG--~VKLiDFGLA 736 (1013)
..+|||||.||||+..+.+. ..|++.....++..+..||.|||++|||||||||.||++-. +| ..||+|||.|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 68999999999999999654 46999999999999999999999999999999999999843 34 3699999999
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHh
Q 001783 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIV 815 (1013)
Q Consensus 737 k~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLT 815 (1013)
+.. ..+....+.+||+.|.+||++.. ..|+..+|.|||||++|++.|
T Consensus 172 rel--------------------------------~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caT 219 (732)
T KOG4250|consen 172 REL--------------------------------DDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECAT 219 (732)
T ss_pred ccC--------------------------------CCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhc
Confidence 831 01123567899999999999985 789999999999999999999
Q ss_pred CCCCCCCC----ChhHHHHhhhccCC-------------------CCCCCCCCCCH----HHHHHHHHhccCCcCCcC
Q 001783 816 GIPPFNAE----HPQQIFDNILNRKI-------------------PWPRVPEEMSP----EAHDLIDRFLTEDPHQRL 866 (1013)
Q Consensus 816 Gk~PF~g~----~~~ei~qkIl~~~~-------------------~~p~lp~~lS~----elkDLI~rMLqkDPekRP 866 (1013)
|..||-.. +..++...+...+. .+| +|..+++ .+...+..+|..+|.+|.
T Consensus 220 G~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP-~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 220 GELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLP-QPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred cCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCC-CcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 99999532 22223333332111 122 2344443 345677889999999998
No 380
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-36 Score=317.77 Aligned_cols=262 Identities=29% Similarity=0.478 Sum_probs=213.3
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc-------
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------- 661 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~------- 661 (1013)
+.|+-+.+||+|.||.||+|+.+.+|+.||+|++-... .+...-...++|+++|..++|+|++.+++.+...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmen-eKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhc-cccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 56888899999999999999999999999998764322 1223345678999999999999999998776543
Q ss_pred -ceEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccc
Q 001783 662 -ENLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVG 739 (1013)
Q Consensus 662 -~~LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~ 739 (1013)
..+||||.+|.. +|..++.+. ..++...++.++.+++.||.|+|++.|+|||+||+|+||+.+|.+||+|||+++..
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~f 174 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAF 174 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence 349999999987 999999765 57999999999999999999999999999999999999999999999999999742
Q ss_pred ccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCC
Q 001783 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIP 818 (1013)
Q Consensus 740 ~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk~ 818 (1013)
.... .. .....+..+-|.+|++||.+.| ..|+++.|||+.|||+.||+||.+
T Consensus 175 s~~~--n~-------------------------~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrsp 227 (376)
T KOG0669|consen 175 STSK--NV-------------------------VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSP 227 (376)
T ss_pred eccc--cc-------------------------CCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCc
Confidence 1110 00 0112345678999999999998 569999999999999999999999
Q ss_pred CCCCCChhHHHHhhhccCC-----CCCC--------------CCC-------------CCCHHHHHHHHHhccCCcCCcC
Q 001783 819 PFNAEHPQQIFDNILNRKI-----PWPR--------------VPE-------------EMSPEAHDLIDRFLTEDPHQRL 866 (1013)
Q Consensus 819 PF~g~~~~ei~qkIl~~~~-----~~p~--------------lp~-------------~lS~elkDLI~rMLqkDPekRP 866 (1013)
.|.+.+..+.+..|..-.. .||. ++. .-.+++.||+.+||..||.+|+
T Consensus 228 imqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~ 307 (376)
T KOG0669|consen 228 IMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRI 307 (376)
T ss_pred cccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCc
Confidence 9999888777666643111 1111 111 1245899999999999999999
Q ss_pred CCCCHHHHHhCCCCCC
Q 001783 867 GSGGASEVKQHVFFKD 882 (1013)
Q Consensus 867 g~~TAeELLqHPFFk~ 882 (1013)
+++++++|.||..
T Consensus 308 ---~ad~alnh~~F~k 320 (376)
T KOG0669|consen 308 ---DADQALNHDFFWK 320 (376)
T ss_pred ---chHhhhchhhhhc
Confidence 9999999999964
No 381
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.3e-32 Score=321.38 Aligned_cols=264 Identities=22% Similarity=0.333 Sum_probs=190.6
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEEC----------------CCCCEEEEEEeeccccccH-----------HHHHHHH
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKR----------------TTGDLFAIKVLKKADMIRK-----------NAVESIL 637 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk----------------~tgk~VALKVlkk~~~~~~-----------e~ie~~l 637 (1013)
+...++|++.++||+|+||+||+|... ..++.||||.++....... ...+...
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 345689999999999999999999752 3456899999864321100 0112334
Q ss_pred HHHHHHHhcCCCCe-----eEEEeeeec--------cceEEEEEEeccCCChHHHHHhcC--------------------
Q 001783 638 AERDILISVRNPFV-----VRFFYSFTC--------RENLYLVMEYLNGGDLYSLLRNLG-------------------- 684 (1013)
Q Consensus 638 ~Ei~IL~~L~HPNI-----VkL~e~fed--------~~~LyLVMEy~~GGSL~dlL~~~g-------------------- 684 (1013)
.|+.++.+++|.++ ++++++|.. ....||||||+.+++|.+++....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 56777777766554 566666543 356899999999999999886421
Q ss_pred ----CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCC
Q 001783 685 ----CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGD 760 (1013)
Q Consensus 685 ----~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd 760 (1013)
.+++..++.++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+++..... .
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~-~---------------- 363 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTG-I---------------- 363 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccC-C----------------
Confidence 2356778899999999999999999999999999999999999999999998631000 0
Q ss_pred CCcccchhhhhhhhhccccccCCCCCCCchhhccCC--------------------CC--ccceeechhHHHHHHHhCCC
Q 001783 761 EEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG--------------------HG--TTADWWSVGIILFELIVGIP 818 (1013)
Q Consensus 761 ~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~--------------------ys--~ksDIWSLGVILYELLTGk~ 818 (1013)
........+|+.|+|||++.... |+ ...||||+||++|+|++|..
T Consensus 364 -------------~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l 430 (507)
T PLN03224 364 -------------NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPEL 430 (507)
T ss_pred -------------ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCC
Confidence 00011234589999999986432 22 24799999999999999875
Q ss_pred -CCCCCC-----------hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCc---CCcCCCCCHHHHHhCCCCCC
Q 001783 819 -PFNAEH-----------PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDP---HQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 819 -PF~g~~-----------~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDP---ekRPg~~TAeELLqHPFFk~ 882 (1013)
||.... ....++.+......++ .....++.++|||.+||+++| .+|+ |++|+|+||||..
T Consensus 431 ~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~-~~d~~s~~~~dLi~~LL~~~~~~~~~Rl---Sa~eaL~Hp~f~~ 505 (507)
T PLN03224 431 RPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFS-LLDRNKEAGWDLACKLITKRDQANRGRL---SVGQALSHRFFLP 505 (507)
T ss_pred CCccchhhhhhHHhhccchHHHHHhhcccCCCcc-cccccChHHHHHHHHHhccCCCCcccCC---CHHHHhCCCCcCC
Confidence 775321 1111222222333343 345678999999999999876 6899 9999999999964
No 382
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=305.17 Aligned_cols=256 Identities=29% Similarity=0.486 Sum_probs=213.0
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc-----
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE----- 662 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~----- 662 (1013)
..+|.-++.+|.|+- .|..|-+.-+++.||+|.+.... ......++..+|..++..++|+||++++.+|....
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf-~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPF-QNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcc-ccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 467999999999998 88889999999999999987663 23334567889999999999999999999997654
Q ss_pred -eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 663 -NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 663 -~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
.+|+|||+|.. +|.+.+. -.++-..++.++.|+++|++|||+.||+||||||+||++..++.+||.|||+|+...
T Consensus 94 ~e~y~v~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~- 169 (369)
T KOG0665|consen 94 QEVYLVMELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED- 169 (369)
T ss_pred HhHHHHHHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccC-
Confidence 58999999975 9999887 347889999999999999999999999999999999999999999999999998310
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
+ .-..+.++.|..|.|||++.+.+|...+||||+||++.||++|...|.
T Consensus 170 --~-----------------------------~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~ 218 (369)
T KOG0665|consen 170 --T-----------------------------DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP 218 (369)
T ss_pred --c-----------------------------ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec
Confidence 0 012335789999999999999999999999999999999999999999
Q ss_pred CCChhHHHHhhhccC---------------------------CCCCC-CC-----------CCCCHHHHHHHHHhccCCc
Q 001783 822 AEHPQQIFDNILNRK---------------------------IPWPR-VP-----------EEMSPEAHDLIDRFLTEDP 862 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~---------------------------~~~p~-lp-----------~~lS~elkDLI~rMLqkDP 862 (1013)
|.+.-+.+.++.... ..+.. +| ..-+..++||+.+||..||
T Consensus 219 g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~p 298 (369)
T KOG0665|consen 219 GKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDP 298 (369)
T ss_pred CchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccCh
Confidence 987766666654310 00000 11 1124569999999999999
Q ss_pred CCcCCCCCHHHHHhCCCCCCCCh
Q 001783 863 HQRLGSGGASEVKQHVFFKDINW 885 (1013)
Q Consensus 863 ekRPg~~TAeELLqHPFFk~Idw 885 (1013)
++|. +++++|+||||+ -|
T Consensus 299 e~Ri---sv~daL~HPY~~--vw 316 (369)
T KOG0665|consen 299 EKRI---SVDDALRHPYIK--VW 316 (369)
T ss_pred hhcc---cHHHHhcCCeee--ee
Confidence 9999 999999999998 46
No 383
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-34 Score=328.05 Aligned_cols=277 Identities=40% Similarity=0.758 Sum_probs=244.2
Q ss_pred EeeccCceEEEEEEE---CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccceEEEEEEec
Q 001783 596 PISRGAFGRVFLAKK---RTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLVMEYL 671 (1013)
Q Consensus 596 ~LGkG~FGtVyLArd---k~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~LyLVMEy~ 671 (1013)
++|.|+||.|++++. ...|..||+|++++......... +...|..++..++ ||++|++++.|+.+..+|+++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999999865 35678899999988765444433 7778999999987 999999999999999999999999
Q ss_pred cCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCC
Q 001783 672 NGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPA 751 (1013)
Q Consensus 672 ~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~ 751 (1013)
.||+|...+.....+.+...+.+..+++.|++++|+.||+|||+|++||+++.+|++++.|||+++....
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~---------- 149 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK---------- 149 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHh----------
Confidence 9999999999988999999999999999999999999999999999999999999999999999984110
Q ss_pred ccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHh
Q 001783 752 VSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDN 831 (1013)
Q Consensus 752 ~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qk 831 (1013)
. ...|||..|||||++. ++..++||||+|+++|||+||..||.. ++...
T Consensus 150 ----------------------~---~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~ 198 (612)
T KOG0603|consen 150 ----------------------E---KIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKR 198 (612)
T ss_pred ----------------------h---hhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHH
Confidence 0 0129999999999998 788999999999999999999999988 77888
Q ss_pred hhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCC--CHHHHHhCCCCCCCChhhHhhh--cCCccCCCCCCCCCCC
Q 001783 832 ILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSY 907 (1013)
Q Consensus 832 Il~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~--TAeELLqHPFFk~Idw~~L~~~--kppfvP~~~s~lDts~ 907 (1013)
|+..... .|..++..+.+++..|+.++|..|++.+ .+.++++|+||..|+|+.+..+ +++|.|......|+.+
T Consensus 199 Il~~~~~---~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~ 275 (612)
T KOG0603|consen 199 ILKAELE---MPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITERDVAQ 275 (612)
T ss_pred HhhhccC---CchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccchhhhhh
Confidence 8876654 4567999999999999999999999974 8999999999999999988664 6899999999999999
Q ss_pred ccccccCCCC
Q 001783 908 FTSRYSWNTT 917 (1013)
Q Consensus 908 Fss~~s~~~~ 917 (1013)
|+..|+..+.
T Consensus 276 fd~eft~~~P 285 (612)
T KOG0603|consen 276 FDPEFTSQVP 285 (612)
T ss_pred cCchhccCCc
Confidence 9987765443
No 384
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-32 Score=310.23 Aligned_cols=263 Identities=24% Similarity=0.391 Sum_probs=220.7
Q ss_pred CCCCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc
Q 001783 582 SKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR 661 (1013)
Q Consensus 582 ~k~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~ 661 (1013)
-+|.+.-.+..+..+||-|.||.||.+.|+.....||||.++...+ .++.|+.|..+|+.++|||+|+|+++|..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM----eveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch----hHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 4566666678889999999999999999999999999999986543 678999999999999999999999999999
Q ss_pred ceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccc
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVG 739 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~ 739 (1013)
..+|||+|||..|+|.+++++. ..++.-.+..++.||..|++||..+++|||||...|.|+..+..||++||||+++.
T Consensus 336 pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 336 PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 9999999999999999999765 34777777788889999999999999999999999999999999999999999952
Q ss_pred ccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCC
Q 001783 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIP 818 (1013)
Q Consensus 740 ~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~ 818 (1013)
. +.+.. . .....-...|.|||-|.-..++.++|||+|||+|||+.| |..
T Consensus 416 t-------------gDTYT-----A------------HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMs 465 (1157)
T KOG4278|consen 416 T-------------GDTYT-----A------------HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMS 465 (1157)
T ss_pred c-------------CCcee-----c------------ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCC
Confidence 1 11100 0 001122457999999999999999999999999999997 999
Q ss_pred CCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 819 PFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 819 PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
||.+.+..++|.-+-++ +.+ .-|++|++...+|++.||++.|.+||++..+.+.++..|-
T Consensus 466 PYPGidlSqVY~LLEkg-yRM-~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 466 PYPGIDLSQVYGLLEKG-YRM-DGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred CCCCccHHHHHHHHhcc-ccc-cCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 99999998888766544 333 4588999999999999999999999955444444444443
No 385
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-34 Score=300.93 Aligned_cols=260 Identities=25% Similarity=0.446 Sum_probs=211.6
Q ss_pred cccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCCeeEEEeeeeccceE
Q 001783 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 586 ~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~-L~HPNIVkL~e~fed~~~L 664 (1013)
+.-++.+-+..||.|+||+|++-.++.+|+..|||.+..... +....+++.|.+...+ -+.||||++|++...++..
T Consensus 61 F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdc 138 (361)
T KOG1006|consen 61 FTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDC 138 (361)
T ss_pred cccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCce
Confidence 344567778899999999999999999999999999986653 4445678888876554 5789999999999999999
Q ss_pred EEEEEeccCCChHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 665 YLVMEYLNGGDLYSLLR-----NLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~-----~~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
+|.||+|+- +|..+.+ ....++|..+-.+..-.+.||+||-+ ..||||||||+|||++..|.|||||||++-.
T Consensus 139 WiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 139 WICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQ 217 (361)
T ss_pred eeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHh
Confidence 999999964 6654432 23579999999999999999999995 6899999999999999999999999998752
Q ss_pred cccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc--CCCCccceeechhHHHHHHHhC
Q 001783 739 GLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG--TGHGTTADWWSVGIILFELIVG 816 (1013)
Q Consensus 739 ~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g--~~ys~ksDIWSLGVILYELLTG 816 (1013)
. ......+...|-..|||||.+.. .+|+-++|+||||++|||+.||
T Consensus 218 L--------------------------------v~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG 265 (361)
T KOG1006|consen 218 L--------------------------------VDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATG 265 (361)
T ss_pred H--------------------------------HHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecC
Confidence 0 11122334578889999999974 5689999999999999999999
Q ss_pred CCCCCCCC-hhHHHHhhhccCCCCCCCCCC---CCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 817 IPPFNAEH-PQQIFDNILNRKIPWPRVPEE---MSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 817 k~PF~g~~-~~ei~qkIl~~~~~~p~lp~~---lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
..||.+.+ ..+.+.++..+..+....+.+ .+..+..||.-||.+|-..|| ...+++++||++..
T Consensus 266 ~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rp---ky~~Lk~~~fyr~y 333 (361)
T KOG1006|consen 266 NFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRP---KYDDLKKFPFYRMY 333 (361)
T ss_pred CCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCc---chhhhhcCchhhhh
Confidence 99998754 344555555565544333333 889999999999999999999 89999999999853
No 386
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.98 E-value=2.3e-32 Score=312.67 Aligned_cols=245 Identities=24% Similarity=0.397 Sum_probs=205.7
Q ss_pred CCcEEEEEeeccCceEEEEEEECCC----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTT----GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~t----gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
+...+.+.||.|.||.||.|....- .--||||+.+.... .+..+.|+.|.-+|+.++|||||+|++++.+. ..
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t--~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~ 465 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT--PDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PM 465 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC--hhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ce
Confidence 3455668899999999999986432 23689999887542 33468899999999999999999999998754 68
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCC
Q 001783 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s 743 (1013)
+||||+++.|.|..+++.+ ..|+......|..||+.||.|||+.++|||||..+|||+.....|||+||||++.. .+
T Consensus 466 WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~-ed- 543 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYL-ED- 543 (974)
T ss_pred eEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhc-cc-
Confidence 9999999999999999765 56999999999999999999999999999999999999999999999999999841 10
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g 822 (1013)
.. + .......-...|||||.+.-..++.++|||-|||++||+|. |.-||.+
T Consensus 544 -----------------~~-y----------YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg 595 (974)
T KOG4257|consen 544 -----------------DA-Y----------YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG 595 (974)
T ss_pred -----------------cc-h----------hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc
Confidence 00 0 11111233567999999998999999999999999999996 9999999
Q ss_pred CChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC
Q 001783 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS 868 (1013)
Q Consensus 823 ~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~ 868 (1013)
-...+++..|-++.. +..|+.+++.+..|+.+||.++|.+||.+
T Consensus 596 vkNsDVI~~iEnGeR--lP~P~nCPp~LYslmskcWayeP~kRPrf 639 (974)
T KOG4257|consen 596 VKNSDVIGHIENGER--LPCPPNCPPALYSLMSKCWAYEPSKRPRF 639 (974)
T ss_pred ccccceEEEecCCCC--CCCCCCCChHHHHHHHHHhccCcccCCcH
Confidence 888888877766543 45788999999999999999999999953
No 387
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.98 E-value=4.3e-33 Score=290.95 Aligned_cols=256 Identities=31% Similarity=0.534 Sum_probs=208.2
Q ss_pred CCCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeecc
Q 001783 583 KDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCR 661 (1013)
Q Consensus 583 k~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~ 661 (1013)
.|+ ..++|++++++|+|.|++||-|.+..++..++||+++.- ..+.+.+|+.||..+. ||||++|++...+.
T Consensus 33 ~wg-~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp 105 (338)
T KOG0668|consen 33 DWG-NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDP 105 (338)
T ss_pred ecc-ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCc
Confidence 344 568899999999999999999999999999999999753 3467889999999997 99999999999876
Q ss_pred c--eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC-CcEEEeecCCccc
Q 001783 662 E--NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD-GHIKLTDFGLSKV 738 (1013)
Q Consensus 662 ~--~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d-G~VKLiDFGLAk~ 738 (1013)
. ..-||+||+++.+...+. +.|+.-.++.|+.||+.||.|||++||+|||+||.|++|+.. ..++|+|+|||.+
T Consensus 106 ~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEF 182 (338)
T KOG0668|consen 106 ESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 182 (338)
T ss_pred cccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhh
Confidence 4 578999999987776665 457888999999999999999999999999999999999974 5799999999975
Q ss_pred cccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCC
Q 001783 739 GLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGI 817 (1013)
Q Consensus 739 ~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTGk 817 (1013)
.. .....+..+.+..|--||.+.. +.|++.-|+|||||++..|+..+
T Consensus 183 YH--------------------------------p~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrk 230 (338)
T KOG0668|consen 183 YH--------------------------------PGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 230 (338)
T ss_pred cC--------------------------------CCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhcc
Confidence 10 0112334567778899999986 56899999999999999999988
Q ss_pred CCC-CCCChhHHHHhhhc-----------------------------cCCCCCCCC-----CCCCHHHHHHHHHhccCCc
Q 001783 818 PPF-NAEHPQQIFDNILN-----------------------------RKIPWPRVP-----EEMSPEAHDLIDRFLTEDP 862 (1013)
Q Consensus 818 ~PF-~g~~~~ei~qkIl~-----------------------------~~~~~p~lp-----~~lS~elkDLI~rMLqkDP 862 (1013)
-|| .+.+..+.+-+|.+ ...+|..+. .-.++++.|||.++|.+|.
T Consensus 231 epFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDH 310 (338)
T KOG0668|consen 231 EPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDH 310 (338)
T ss_pred CcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhcc
Confidence 887 45554444444432 011111111 1257999999999999999
Q ss_pred CCcCCCCCHHHHHhCCCCCCC
Q 001783 863 HQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 863 ekRPg~~TAeELLqHPFFk~I 883 (1013)
.+|| ||.|.+.||||..+
T Consensus 311 qeRl---TakEam~HpyF~~~ 328 (338)
T KOG0668|consen 311 QERL---TAKEAMAHPYFAPV 328 (338)
T ss_pred cccc---chHHHhcCchHHHH
Confidence 9999 99999999999754
No 388
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.98 E-value=5.2e-32 Score=335.61 Aligned_cols=240 Identities=24% Similarity=0.329 Sum_probs=188.2
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
..|...+.||+|+||.||+|+++.++..||+|.++.... ....|+.++++++|||||++++++.+....|+||
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 456777899999999999999999999999999865332 1124578899999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLH---SLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLH---s~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
||+++|+|.++++. +++..+..++.||+.||+||| +.+|+||||||+||+++.++..++. ||.+....
T Consensus 763 Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~----- 833 (968)
T PLN00113 763 EYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC----- 833 (968)
T ss_pred eCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc-----
Confidence 99999999999964 789999999999999999999 6799999999999999998888775 66543100
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
......||+.|||||++.+..++.++|||||||++|||+||+.||.....
T Consensus 834 ------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~ 883 (968)
T PLN00113 834 ------------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG 883 (968)
T ss_pred ------------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC
Confidence 01123689999999999999999999999999999999999999954221
Q ss_pred -----hHHHHhhhccC-C---CCCCC------CCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 826 -----QQIFDNILNRK-I---PWPRV------PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 826 -----~ei~qkIl~~~-~---~~p~l------p~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.+..+...... . .-+.. +.....++.+++.+||+.||.+|| ++.++++.
T Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP---t~~evl~~ 947 (968)
T PLN00113 884 VHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARP---CANDVLKT 947 (968)
T ss_pred CCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCc---CHHHHHHH
Confidence 11111100000 0 00111 111223577899999999999999 89998874
No 389
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.8e-33 Score=298.84 Aligned_cols=260 Identities=28% Similarity=0.494 Sum_probs=213.2
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccc-----eEE
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE-----NLY 665 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~-----~Ly 665 (1013)
.+--+.||.|+||.||.+.+..+|+.||+|.+..- ...-..-+.+.+|+.+|..++|.|++..++..+... .+|
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv-fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV-FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchH-HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 44456799999999999999999999999987642 222334578899999999999999999988776543 478
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
+++|+|.. +|..+|-..+.++.+.++-+++||+.||+|||+.||.||||||.|+|++.+..+||||||+|+....
T Consensus 134 V~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~---- 208 (449)
T KOG0664|consen 134 VLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ---- 208 (449)
T ss_pred HHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccch----
Confidence 99999965 9999998888999999999999999999999999999999999999999999999999999995211
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
......+..+-|-.|+|||+++|. .|+.++||||+|||+.|||..+..|...+
T Consensus 209 --------------------------d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~ 262 (449)
T KOG0664|consen 209 --------------------------RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG 262 (449)
T ss_pred --------------------------hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC
Confidence 112223345678899999999984 58999999999999999999999999888
Q ss_pred hhHHHHhhhc-----------------------cCCCCCCC--------CCCCCHHHHHHHHHhccCCcCCcCCCCCHHH
Q 001783 825 PQQIFDNILN-----------------------RKIPWPRV--------PEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1013)
Q Consensus 825 ~~ei~qkIl~-----------------------~~~~~p~l--------p~~lS~elkDLI~rMLqkDPekRPg~~TAeE 873 (1013)
+.+.++.|.. ....-|.+ +..-..++.+++.+||..||.+|. +.++
T Consensus 263 PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkri---s~~~ 339 (449)
T KOG0664|consen 263 PIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRI---SVEE 339 (449)
T ss_pred hHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccc---cHhh
Confidence 8777666644 11111111 123346788999999999999999 8999
Q ss_pred HHhCCCCCCCCh
Q 001783 874 VKQHVFFKDINW 885 (1013)
Q Consensus 874 LLqHPFFk~Idw 885 (1013)
.+.|++..+.+.
T Consensus 340 A~~~~~~~e~R~ 351 (449)
T KOG0664|consen 340 ALQHRYLEEGRL 351 (449)
T ss_pred hcccccccccce
Confidence 999999986543
No 390
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-32 Score=315.81 Aligned_cols=253 Identities=23% Similarity=0.359 Sum_probs=212.5
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCC-CC--EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTT-GD--LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~t-gk--~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
.++..++++||+|.||.|+.|.|... |+ .||||+++...... ....|++|+.+|.+|+|||+++||++..+ ..+
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence 35677889999999999999998753 33 68999997654322 67899999999999999999999999988 678
Q ss_pred EEEEEeccCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 665 YLVMEYLNGGDLYSLLRN--LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~--~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
.||||++++|+|.+.|++ .+.|.......|+.||+.|+.||..+++|||||-..|||+-....|||+||||.+-. ..
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaL-g~ 264 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRAL-GE 264 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceecc-CC
Confidence 999999999999999987 356889999999999999999999999999999999999999999999999998831 11
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFN 821 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~ 821 (1013)
..+ ...+ .....-...|+|||.|....++.++|+|++||+||||++ |..||.
T Consensus 265 ned----------------~Yvm-----------~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~ 317 (1039)
T KOG0199|consen 265 NED----------------MYVM-----------APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWV 317 (1039)
T ss_pred CCc----------------ceEe-----------cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCC
Confidence 000 0000 111223557999999999999999999999999999997 899999
Q ss_pred CCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
+....+++++|-.+. . ...|+.+++++.+++..||..+|.+|| ++..|.+
T Consensus 318 G~~g~qIL~~iD~~e-r-LpRPk~csedIY~imk~cWah~paDRp---tFsair~ 367 (1039)
T KOG0199|consen 318 GCRGIQILKNIDAGE-R-LPRPKYCSEDIYQIMKNCWAHNPADRP---TFSAIRE 367 (1039)
T ss_pred CCCHHHHHHhccccc-c-CCCCCCChHHHHHHHHHhccCCccccc---cHHHHHH
Confidence 999999999987433 2 345788999999999999999999999 6665543
No 391
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.97 E-value=6.3e-32 Score=308.18 Aligned_cols=254 Identities=25% Similarity=0.359 Sum_probs=210.2
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
+...+.++||+|.||.|.+|+-. .+..||+|+++... .......|..|+++|.+|+||||++|++++..++.+|+||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDA--TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred hheehhhhhcCcccceeEEEEec-CceEEEEeecCccc--chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence 45788899999999999999873 47899999998654 3445578999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 669 EYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
|||..|+|.+++.+. ..+.......++.||+.|++||.+.+||||||.+.|+|++.++++||+|||+++-...
T Consensus 615 EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys----- 689 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS----- 689 (807)
T ss_pred HHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCccccccccc-----
Confidence 999999999999876 3345556667999999999999999999999999999999999999999999983110
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHH--hCCCCCCCCC
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELI--VGIPPFNAEH 824 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELL--TGk~PF~g~~ 824 (1013)
++. .+.....+-..+|||||.+....++.++|+|+||+++||++ +...||....
T Consensus 690 --g~y----------------------y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt 745 (807)
T KOG1094|consen 690 --GDY----------------------YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT 745 (807)
T ss_pred --CCc----------------------eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh
Confidence 000 00112245677999999999999999999999999999987 4789998877
Q ss_pred hhHHHHhhhcc-----CCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 825 PQQIFDNILNR-----KIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 825 ~~ei~qkIl~~-----~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.+++.++...- ....+..|.-++..+.+||.+||..|-.+|| +.+++-.|
T Consensus 746 ~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RP---sFe~lh~~ 800 (807)
T KOG1094|consen 746 DEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRP---SFEQLHLF 800 (807)
T ss_pred HHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCC---CHHHHHHH
Confidence 77776665331 1123345677999999999999999999999 78877543
No 392
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.97 E-value=5.8e-32 Score=316.05 Aligned_cols=256 Identities=24% Similarity=0.367 Sum_probs=220.5
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCC---EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGD---LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk---~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~ 663 (1013)
......|-++||.|.||+|+.|+.+..|+ .||||.++... .+++...|+.|..||-+++||||++|.++......
T Consensus 627 d~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P 704 (996)
T KOG0196|consen 627 DPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP 704 (996)
T ss_pred ChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce
Confidence 34567888999999999999999986664 79999998653 45667899999999999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 664 LYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
++||+|||++|+|..+|+.+ +.|+..++.-+++.|+.|++||-++|+|||||...|||++.+-..|++||||+++ +.+
T Consensus 705 vMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRv-led 783 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRV-LED 783 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceee-ccc
Confidence 99999999999999999765 7799999999999999999999999999999999999999999999999999995 221
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFN 821 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~ 821 (1013)
..+. .. .+....-..+|.|||.+....++.++||||+|++|||.++ |..||.
T Consensus 784 d~~~-------~y--------------------tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYW 836 (996)
T KOG0196|consen 784 DPEA-------AY--------------------TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 836 (996)
T ss_pred CCCc-------cc--------------------cccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccc
Confidence 1100 00 0011122468999999999999999999999999999885 999999
Q ss_pred CCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
..+.++++..|..+. .+| -|.+++..+..|+..||++|-.+|| ...+|+.+
T Consensus 837 dmSNQdVIkaIe~gy-RLP-pPmDCP~aL~qLMldCWqkdR~~RP---~F~qiV~~ 887 (996)
T KOG0196|consen 837 DMSNQDVIKAIEQGY-RLP-PPMDCPAALYQLMLDCWQKDRNRRP---KFAQIVST 887 (996)
T ss_pred ccchHHHHHHHHhcc-CCC-CCCCCcHHHHHHHHHHHHHHhhcCC---CHHHHHHH
Confidence 999999999997654 344 3678999999999999999999999 88888775
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=4.2e-32 Score=319.83 Aligned_cols=246 Identities=30% Similarity=0.418 Sum_probs=197.4
Q ss_pred EEEeeccCceE-EEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceEEEEEEec
Q 001783 594 IKPISRGAFGR-VFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYL 671 (1013)
Q Consensus 594 lk~LGkG~FGt-VyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~LyLVMEy~ 671 (1013)
-+.+|.|+.|+ ||+|.. .|+.||||.+-. +......+|+..|+.. +|||||++|..-++...+||.+|+|
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY--EGREVAVKRLLE------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred HHHcccCCCCcEEEEEee--CCceehHHHHhh------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 35689999986 889886 478999997643 3446778999999987 5999999999999999999999999
Q ss_pred cCCChHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC---C--CcEEEeecCCccccccC
Q 001783 672 NGGDLYSLLRNLG----CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH---D--GHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 672 ~GGSL~dlL~~~g----~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~---d--G~VKLiDFGLAk~~~~~ 742 (1013)
.. +|.+++...+ .......+..+.|++.||++||+.+||||||||.||||.. + ..++|+|||+++.....
T Consensus 586 ~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~ 664 (903)
T KOG1027|consen 586 AC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG 664 (903)
T ss_pred hh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence 75 9999998731 1122456788999999999999999999999999999976 3 36899999999841110
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhC-CCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVG-IPPFN 821 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG-k~PF~ 821 (1013)
...-.+..+..||-+|+|||++.....+.++||+||||++|..++| ..||.
T Consensus 665 ----------------------------~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFG 716 (903)
T KOG1027|consen 665 ----------------------------KSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFG 716 (903)
T ss_pred ----------------------------cchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCC
Confidence 0111224567899999999999998888999999999999999985 89997
Q ss_pred CCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCC
Q 001783 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk 881 (1013)
.... .-.+|+.+......+......++.|||.+||..+|..|| +|.++|.||||=
T Consensus 717 d~~~--R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RP---sa~~VL~HPlFW 771 (903)
T KOG1027|consen 717 DSLE--RQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRP---SATDVLNHPLFW 771 (903)
T ss_pred chHH--hhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCC---CHHHHhCCCccC
Confidence 5443 334677766554443332223899999999999999999 999999999993
No 394
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.97 E-value=4.3e-32 Score=325.66 Aligned_cols=269 Identities=50% Similarity=0.901 Sum_probs=224.3
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
.-++|+.++.|-.|+||-||+++|+.+.+.+|+|+ ++..+.-+ .||....+|++|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~lilR----------nilt~a~npfvv-------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLILR----------NILTFAGNPFVV-------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcc-cccchhhh----------ccccccCCccee--------------
Confidence 34789999999999999999999999999999965 43322111 155555666666
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCC
Q 001783 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~dd 746 (1013)
||-.+.++..+.++.+. +.|++|||+-||+|||+||+|.||+.-|++|++|||+++.+....+..
T Consensus 136 -------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 -------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred -------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 56677777777777654 789999999999999999999999999999999999999654322211
Q ss_pred CCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001783 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1013)
Q Consensus 747 ls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ 826 (1013)
++.. .+. .+ ...-.....||||.|+||||+..++|+..+|||++|+|+||.+.|..||.+++++
T Consensus 201 ----------l~eg---~I~-k~--t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe 264 (1205)
T KOG0606|consen 201 ----------LKEG---HIE-KD--THEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE 264 (1205)
T ss_pred ----------hhhc---chH-HH--HHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH
Confidence 1100 000 00 1112234569999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHhhhcCCccCCCCCCCCCC
Q 001783 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSESALDTS 906 (1013)
Q Consensus 827 ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~~~kppfvP~~~s~lDts 906 (1013)
+++..++.....||+-.+..+++++++|.++|..+|..|+|-+++-++.+|+||+.++|..|.++++.|+|......|++
T Consensus 265 elfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~~llRqkaefvpql~~eddts 344 (1205)
T KOG0606|consen 265 ELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWKSLLRQKAEFVPQLESEDDTS 344 (1205)
T ss_pred HHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccchhhhhhccccccccccccch
Confidence 99999999999998877789999999999999999999999889999999999999999999999999999999999999
Q ss_pred Ccccc
Q 001783 907 YFTSR 911 (1013)
Q Consensus 907 ~Fss~ 911 (1013)
||+++
T Consensus 345 yfdTR 349 (1205)
T KOG0606|consen 345 YFDTR 349 (1205)
T ss_pred hhccc
Confidence 99873
No 395
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-32 Score=310.17 Aligned_cols=203 Identities=28% Similarity=0.517 Sum_probs=181.4
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHH-----HHHHHHHHHHHHhcC---CCCeeEEEeee
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNA-----VESILAERDILISVR---NPFVVRFFYSF 658 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~-----ie~~l~Ei~IL~~L~---HPNIVkL~e~f 658 (1013)
.+.+|..++.||.|+||.|++|.++.+...|+||.+.|.++..... ...+-.|+.||..++ |+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 4578999999999999999999999999999999999877543333 335667999999998 99999999999
Q ss_pred eccceEEEEEEec-cCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcc
Q 001783 659 TCRENLYLVMEYL-NGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1013)
Q Consensus 659 ed~~~LyLVMEy~-~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1013)
++++++||+||-- +|.+|+++|..++.++|.+++.|++|++.|+++||+.||||||||-+|++++.+|.+||+|||.|.
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa 718 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAA 718 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchh
Confidence 9999999999975 456999999999999999999999999999999999999999999999999999999999999886
Q ss_pred ccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCC-CccceeechhHHHHHHHhC
Q 001783 738 VGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH-GTTADWWSVGIILFELIVG 816 (1013)
Q Consensus 738 ~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~y-s~ksDIWSLGVILYELLTG 816 (1013)
.. +......++||..|.|||++.|..| +..-|||+||++||.++..
T Consensus 719 ~~---------------------------------ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyk 765 (772)
T KOG1152|consen 719 YT---------------------------------KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYK 765 (772)
T ss_pred hh---------------------------------cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEec
Confidence 31 1122346899999999999999887 7889999999999999999
Q ss_pred CCCCCC
Q 001783 817 IPPFNA 822 (1013)
Q Consensus 817 k~PF~g 822 (1013)
..||+.
T Consensus 766 enpyyn 771 (772)
T KOG1152|consen 766 ENPYYN 771 (772)
T ss_pred cCCCcC
Confidence 999974
No 396
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=315.97 Aligned_cols=258 Identities=32% Similarity=0.535 Sum_probs=225.7
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
-++|+++..+|.|+||.||+|+++.+++..|+|+++... .....-+..|+-+++.++|||||-+++.|.....+++.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep---~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP---GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccC---CccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 478999999999999999999999999999999998643 33456677899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCC
Q 001783 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1013)
Q Consensus 668 MEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddl 747 (1013)
||||.||+|.+..+--+.+++.++.+..++.+.||+|||++|=+|||||-.|||+++.|.+||+|||.+-..
T Consensus 91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqi-------- 162 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQI-------- 162 (829)
T ss_pred EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhh--------
Confidence 999999999999888899999999999999999999999999999999999999999999999999986520
Q ss_pred CCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhh---ccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001783 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEIL---LGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 748 s~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL---~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~ 824 (1013)
+ ..-.+..++.|||.|||||+. +..+|+..||||++|++..|+-.-++|-....
T Consensus 163 ------------------t-----ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh 219 (829)
T KOG0576|consen 163 ------------------T-----ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH 219 (829)
T ss_pred ------------------h-----hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc
Confidence 0 112345689999999999986 35679999999999999999999999877777
Q ss_pred hhHHHHhhhccCCCCCCC--CCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 825 PQQIFDNILNRKIPWPRV--PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~l--p~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
+......+.+..++-|.+ +...++.+.+|++.+|.++|.+|| +++.+|+|||...
T Consensus 220 pmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRp---taeklL~h~fvs~ 276 (829)
T KOG0576|consen 220 PMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRP---TAEKLLQHPFVSQ 276 (829)
T ss_pred hHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCC---Chhhheeceeecc
Confidence 766665555555554443 346899999999999999999999 9999999999874
No 397
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=6.3e-31 Score=293.01 Aligned_cols=284 Identities=24% Similarity=0.422 Sum_probs=208.4
Q ss_pred CCcEEEEEeeccCceEEEEEEECC---CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccceE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRT---TGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~---tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~L 664 (1013)
+.|.++.+||.|+|++||++.+.. .+++||+|.+.... ...++.+|+++|..+. +.||+++.+++..++.+
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v 110 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV 110 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence 569999999999999999999887 78899999887543 3467899999999884 88999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC-CCcEEEeecCCccccccCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~~~~~s 743 (1013)
++||||++.-+..++... ++-..++.|++.++.||.++|.+|||||||||.|+|.+. .+.-.|+|||||.......
T Consensus 111 ~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~ 187 (418)
T KOG1167|consen 111 AIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQ 187 (418)
T ss_pred EEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhh
Confidence 999999999888888765 678899999999999999999999999999999999986 5788999999997311111
Q ss_pred --CC--CC--------CCCCccCcccCCCCCc-ccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHH
Q 001783 744 --TD--DL--------SGPAVSGTTLLGDEEP-QLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGII 809 (1013)
Q Consensus 744 --~d--dl--------s~p~~~gttl~gd~~~-~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVI 809 (1013)
.. .. .+.....+...+...+ ..................||++|+|||++... ..+.++||||.|||
T Consensus 188 ~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI 267 (418)
T KOG1167|consen 188 QTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVI 267 (418)
T ss_pred hhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccce
Confidence 00 00 1111111111110000 00000011123344577899999999999874 47899999999999
Q ss_pred HHHHHhCCCCCCCC-ChhHHHHhhhc--------------cC------C----------CCCCC----------------
Q 001783 810 LFELIVGIPPFNAE-HPQQIFDNILN--------------RK------I----------PWPRV---------------- 842 (1013)
Q Consensus 810 LYELLTGk~PF~g~-~~~ei~qkIl~--------------~~------~----------~~p~l---------------- 842 (1013)
+.-++++..||... +.......|.. +. . .|..+
T Consensus 268 ~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~ 347 (418)
T KOG1167|consen 268 LLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTERE 347 (418)
T ss_pred eehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeec
Confidence 99999999998432 11111111100 00 0 00000
Q ss_pred --CCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 843 --PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 843 --p~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
.+..+..+.||+.+||+.||.+|. ||+++|+||||...
T Consensus 348 ~~~d~~~~~~~dlLdk~le~np~kRi---tAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 348 IGSDVFPALLLDLLDKCLELNPQKRI---TAEDALKHPFFDEA 387 (418)
T ss_pred cccccccHHHHHHHHHHccCChhhcc---cHHHHhcCcCCcch
Confidence 122456899999999999999999 99999999999854
No 398
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9.7e-30 Score=303.57 Aligned_cols=257 Identities=28% Similarity=0.453 Sum_probs=210.3
Q ss_pred CCCcccCCcEEEEEeeccCceEEEEEEEC---C----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEE
Q 001783 583 KDRTSIDDFEIIKPISRGAFGRVFLAKKR---T----TGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRF 654 (1013)
Q Consensus 583 k~~~~lddYeIlk~LGkG~FGtVyLArdk---~----tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL 654 (1013)
.+...-++..+.+.||+|+||.|++|... . ....||+|.++.... ....+.+..|+.+|..+ .||||+.+
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhh
Confidence 45555566677789999999999999753 1 145799999876543 25678899999999987 59999999
Q ss_pred EeeeeccceEEEEEEeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCC
Q 001783 655 FYSFTCRENLYLVMEYLNGGDLYSLLRNLG----------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPD 718 (1013)
Q Consensus 655 ~e~fed~~~LyLVMEy~~GGSL~dlL~~~g----------------~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPe 718 (1013)
++++...+.+++|+||+..|+|..+++..+ .++......++.||+.|++||++.++|||||-.+
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR 447 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR 447 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence 999999999999999999999999997655 3888999999999999999999999999999999
Q ss_pred ceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccC--CCCCCCchhhccCC
Q 001783 719 NLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVG--TPDYLAPEILLGTG 796 (1013)
Q Consensus 719 NILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vG--Tp~YmAPEVL~g~~ 796 (1013)
|||+..+..+||+|||+|+..... + ........| ...|||||.+....
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~--~----------------------------~y~~~~~~~~LP~kWmApEsl~~~~ 497 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNK--D----------------------------YYRTKSSAGTLPVKWMAPESLFDRV 497 (609)
T ss_pred hEEecCCCEEEEccccceeccCCC--C----------------------------ceEecCCCCccceeecCHHHhccCc
Confidence 999999999999999999831100 0 000011122 34599999999999
Q ss_pred CCccceeechhHHHHHHHh-CCCCCCCCC-hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHH
Q 001783 797 HGTTADWWSVGIILFELIV-GIPPFNAEH-PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1013)
Q Consensus 797 ys~ksDIWSLGVILYELLT-Gk~PF~g~~-~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeEL 874 (1013)
|+.++||||+|++||||++ |..||.+.. ..++++.+..+.. ...|..+++++.++++.||+.+|++|| +..++
T Consensus 498 ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r--~~~P~~c~~eiY~iM~~CW~~~p~~RP---~F~~~ 572 (609)
T KOG0200|consen 498 FTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNR--MEQPEHCSDEIYDLMKSCWNADPEDRP---TFSEC 572 (609)
T ss_pred ccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHhCCCcccCC---CHHHH
Confidence 9999999999999999998 899999855 5666664544433 456788999999999999999999999 66655
Q ss_pred Hh
Q 001783 875 KQ 876 (1013)
Q Consensus 875 Lq 876 (1013)
..
T Consensus 573 ~~ 574 (609)
T KOG0200|consen 573 VE 574 (609)
T ss_pred HH
Confidence 54
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=3e-29 Score=245.27 Aligned_cols=212 Identities=43% Similarity=0.769 Sum_probs=186.3
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCCCh
Q 001783 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1013)
Q Consensus 597 LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL 676 (1013)
||.|++|.||++....+++.+++|++....... ....+.+|+.+++.+.|++|+++++++......+++||++.|++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999998889999999987654211 356789999999999999999999999999999999999999999
Q ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC-CCcEEEeecCCccccccCCCCCCCCCCccC
Q 001783 677 YSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKVGLINSTDDLSGPAVSG 754 (1013)
Q Consensus 677 ~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~~~~~s~ddls~p~~~g 754 (1013)
.+++... ..++...+..++.+++.+|++||+.|++|+||+|.||+++. ++.++|+|||.+.......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~----------- 147 (215)
T cd00180 79 KDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK----------- 147 (215)
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc-----------
Confidence 9999875 57899999999999999999999999999999999999999 8999999999987311000
Q ss_pred cccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhh
Q 001783 755 TTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1013)
Q Consensus 755 ttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl 833 (1013)
.......+...|++||.+... .++.+.|+|+||+++|+|
T Consensus 148 --------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------- 187 (215)
T cd00180 148 --------------------SLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------- 187 (215)
T ss_pred --------------------chhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------
Confidence 012234678899999999887 788999999999999999
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCC
Q 001783 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHV 878 (1013)
Q Consensus 834 ~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHP 878 (1013)
..+.+++.+||+.||.+|| ++.++++|+
T Consensus 188 --------------~~~~~~l~~~l~~~p~~R~---~~~~l~~~~ 215 (215)
T cd00180 188 --------------PELKDLIRKMLQKDPEKRP---SAKEILEHL 215 (215)
T ss_pred --------------HHHHHHHHHHhhCCcccCc---CHHHHhhCC
Confidence 6789999999999999999 999999885
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=6.9e-29 Score=249.99 Aligned_cols=214 Identities=45% Similarity=0.752 Sum_probs=183.4
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEe
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy 670 (1013)
|.+.+.||.|++|+||++.+..+++.+|+|.+...... .....+.+|+..+..++|+|++++++.+......++++|+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 67889999999999999999988999999999865432 2457888999999999999999999999999999999999
Q ss_pred ccCCChHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001783 671 LNGGDLYSLLRNLGC-LDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1013)
Q Consensus 671 ~~GGSL~dlL~~~g~-LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~ 749 (1013)
+++++|.+++..... +++..+..++.+++.+|.|||++|++|+||+|.||+++.++.++|+|||++.......
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~------ 152 (225)
T smart00221 79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL------ 152 (225)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc------
Confidence 999999999988766 8999999999999999999999999999999999999999999999999987411000
Q ss_pred CCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhh-ccCCCCccceeechhHHHHHHHhCCCCCCC--CChh
Q 001783 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEIL-LGTGHGTTADWWSVGIILFELIVGIPPFNA--EHPQ 826 (1013)
Q Consensus 750 p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL-~g~~ys~ksDIWSLGVILYELLTGk~PF~g--~~~~ 826 (1013)
........++..|++||.+ ....++.++|+|+||+++|+|++|+.||.. .+..
T Consensus 153 ------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~ 208 (225)
T smart00221 153 ------------------------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTS 208 (225)
T ss_pred ------------------------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHH
Confidence 0012235688899999999 667788899999999999999999999987 4444
Q ss_pred HHHHhhhccC
Q 001783 827 QIFDNILNRK 836 (1013)
Q Consensus 827 ei~qkIl~~~ 836 (1013)
.+.+.+..+.
T Consensus 209 ~~~~~~~~~~ 218 (225)
T smart00221 209 LLSDVWSFGV 218 (225)
T ss_pred HHHHHHhcCC
Confidence 6666666554
No 401
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1e-28 Score=276.56 Aligned_cols=249 Identities=25% Similarity=0.417 Sum_probs=192.2
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh--cCCCCeeEEEeeeeccc---
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS--VRNPFVVRFFYSFTCRE--- 662 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~--L~HPNIVkL~e~fed~~--- 662 (1013)
-.+.++++.||+|-||+||+|+++ |..||||++...+ .....+|.+|.+. |+|+||+.++++-...+
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD------ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred hheeEEEEEecCccccceeecccc--CCceEEEEecccc------hhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 356899999999999999999986 7889999997532 3567788888875 69999999997765443
Q ss_pred -eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--------CCeeecccCCCceeecCCCcEEEeec
Q 001783 663 -NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS--------LRVVHRDLKPDNLLIAHDGHIKLTDF 733 (1013)
Q Consensus 663 -~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs--------~GIIHRDIKPeNILLd~dG~VKLiDF 733 (1013)
.+|||++|.+.|+|+++|.+ ..++.+....++..++.||++||. -.|.|||||..|||+..+|..-|+|+
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL 360 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 360 (513)
T ss_pred EEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence 69999999999999999988 679999999999999999999994 24999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC----C--Cccceeechh
Q 001783 734 GLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG----H--GTTADWWSVG 807 (1013)
Q Consensus 734 GLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~----y--s~ksDIWSLG 807 (1013)
|||....... +. -....+..+||.+|||||+|...- + -..+||||||
T Consensus 361 GLAv~h~~~t-~~--------------------------idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafg 413 (513)
T KOG2052|consen 361 GLAVRHDSDT-DT--------------------------IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFG 413 (513)
T ss_pred eeeEEecccC-Cc--------------------------ccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHH
Confidence 9997422111 10 012245679999999999997532 1 2467999999
Q ss_pred HHHHHHHh-----C-----CCCCCCC-----ChhHHHHhhhccCCCCCCCCCCCC-----HHHHHHHHHhccCCcCCcCC
Q 001783 808 IILFELIV-----G-----IPPFNAE-----HPQQIFDNILNRKIPWPRVPEEMS-----PEAHDLIDRFLTEDPHQRLG 867 (1013)
Q Consensus 808 VILYELLT-----G-----k~PF~g~-----~~~ei~qkIl~~~~~~p~lp~~lS-----~elkDLI~rMLqkDPekRPg 867 (1013)
.++||+.. | ++||+.- +.+++..-+...+. .|.+|..++ ..+..|++.||..||.-|+
T Consensus 414 LVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~-RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRl- 491 (513)
T KOG2052|consen 414 LVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKL-RPNIPNRWKSDPALRVMAKLMKECWYANPAARL- 491 (513)
T ss_pred HHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeeccc-CCCCCcccccCHHHHHHHHHHHHhhcCCchhhh-
Confidence 99999985 2 6788642 33344333332222 244444332 2466789999999999999
Q ss_pred CCCHHHHHh
Q 001783 868 SGGASEVKQ 876 (1013)
Q Consensus 868 ~~TAeELLq 876 (1013)
||-.|++
T Consensus 492 --tALriKK 498 (513)
T KOG2052|consen 492 --TALRIKK 498 (513)
T ss_pred --HHHHHHH
Confidence 7766654
No 402
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3.3e-29 Score=281.94 Aligned_cols=243 Identities=24% Similarity=0.417 Sum_probs=189.1
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh--cCCCCeeEEEeeeeccc---
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS--VRNPFVVRFFYSFTCRE--- 662 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~--L~HPNIVkL~e~fed~~--- 662 (1013)
+...++++.||+|.||.||+|+.. ++.||||++.. ...+.+.+|.+|... +.|+||++++.+-....
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~ 280 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADR 280 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc--CceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccc
Confidence 566788899999999999999874 69999999864 345788899999875 68999999997765544
Q ss_pred -eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---------CCeeecccCCCceeecCCCcEEEee
Q 001783 663 -NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS---------LRVVHRDLKPDNLLIAHDGHIKLTD 732 (1013)
Q Consensus 663 -~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs---------~GIIHRDIKPeNILLd~dG~VKLiD 732 (1013)
.++||+||.+.|+|.+++.. ..+++.....++..+++||+|||+ ..|+|||||..||||..++...|+|
T Consensus 281 ~eywLVt~fh~kGsL~dyL~~-ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLKA-NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred cceeEEeeeccCCcHHHHHHh-ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 68999999999999999987 468999999999999999999995 4699999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC-CC-----ccceeech
Q 001783 733 FGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG-HG-----TTADWWSV 806 (1013)
Q Consensus 733 FGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~-ys-----~ksDIWSL 806 (1013)
||||..... . . ........+||.+|||||+|.|.- .. ...||||+
T Consensus 360 FGLAl~~~p---------~-------------~-------~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYam 410 (534)
T KOG3653|consen 360 FGLALRLEP---------G-------------K-------PQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAM 410 (534)
T ss_pred cceeEEecC---------C-------------C-------CCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHH
Confidence 999985210 0 0 001122369999999999998742 22 46799999
Q ss_pred hHHHHHHHhCC------------CCCC-----CCChhHHHHhhhccCCCCCCCCCC-----CCHHHHHHHHHhccCCcCC
Q 001783 807 GIILFELIVGI------------PPFN-----AEHPQQIFDNILNRKIPWPRVPEE-----MSPEAHDLIDRFLTEDPHQ 864 (1013)
Q Consensus 807 GVILYELLTGk------------~PF~-----g~~~~ei~qkIl~~~~~~p~lp~~-----lS~elkDLI~rMLqkDPek 864 (1013)
|.+||||++.. +||. ..+.+++...++..+ ..|.+|.. --.-+++.|..||..||+-
T Consensus 411 gLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK-~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeA 489 (534)
T KOG3653|consen 411 GLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKK-QRPKIPDAWRKHAGMAVLCETIEECWDHDAEA 489 (534)
T ss_pred HHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhc-cCCCChhhhhcCccHHHHHHHHHHHcCCchhh
Confidence 99999999742 2332 123444444444433 33444432 2356889999999999999
Q ss_pred cCCCC
Q 001783 865 RLGSG 869 (1013)
Q Consensus 865 RPg~~ 869 (1013)
|++++
T Consensus 490 RLTA~ 494 (534)
T KOG3653|consen 490 RLTAG 494 (534)
T ss_pred hhhhH
Confidence 99443
No 403
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=9.5e-29 Score=289.81 Aligned_cols=248 Identities=23% Similarity=0.323 Sum_probs=206.5
Q ss_pred cEEEEEeeccCceEEEEEEECCCCC----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEE
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGD----LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk----~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyL 666 (1013)
.+..++||.|+||+||+|.+...|+ +||+|++.... ..+.-..++.|.-+|.+++|||+++|++++.... +.|
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQL 774 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHH
Confidence 5567899999999999999875554 68999886543 2334568899999999999999999999988776 889
Q ss_pred EEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCC
Q 001783 667 VMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~d 745 (1013)
|++||++|.|.++++.. +.+.......|..||+.||.|||.++++||||-.+|||+..-.++||+|||+|+....+..
T Consensus 775 vtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~- 853 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK- 853 (1177)
T ss_pred HHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccc-
Confidence 99999999999999765 6799999999999999999999999999999999999999999999999999985211110
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEH 824 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk~PF~g~~ 824 (1013)
........-.+.|||=|.+....|+.++||||+||++||++| |..||.+..
T Consensus 854 ----------------------------ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~ 905 (1177)
T KOG1025|consen 854 ----------------------------EYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP 905 (1177)
T ss_pred ----------------------------cccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC
Confidence 001112233567999999999999999999999999999998 999999988
Q ss_pred hhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHH
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1013)
Q Consensus 825 ~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELL 875 (1013)
..++-..+..+.. ...|+.++.++.-++.+||..|+..|| +++++.
T Consensus 906 ~~eI~dlle~geR--LsqPpiCtiDVy~~mvkCwmid~~~rp---~fkel~ 951 (1177)
T KOG1025|consen 906 AEEIPDLLEKGER--LSQPPICTIDVYMVMVKCWMIDADSRP---TFKELA 951 (1177)
T ss_pred HHHhhHHHhcccc--CCCCCCccHHHHHHHHHHhccCcccCc---cHHHHH
Confidence 8877666655443 345788999999999999999999999 555544
No 404
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=1.7e-28 Score=253.80 Aligned_cols=214 Identities=32% Similarity=0.569 Sum_probs=177.3
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceEEEE
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~LyLV 667 (1013)
++...+..||+|+||.|-+.++..+|...|+|-+...- ..+..++.++|+++..+. ..|++|.+|+.+.....+++.
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc 123 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC 123 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence 45667788999999999999999999999999987543 234457788899887664 789999999999999999999
Q ss_pred EEeccCCChHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCccccccC
Q 001783 668 MEYLNGGDLYSLL----RNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 668 MEy~~GGSL~dlL----~~~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1013)
||.|.. +|..+. .+.+.++|..+-.++..++.||.|||+ ..|||||+||+||||+.+|+||+||||++-. +.+
T Consensus 124 ME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~-L~d 201 (282)
T KOG0984|consen 124 MELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGY-LVD 201 (282)
T ss_pred HHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccccccee-ehh
Confidence 999965 775543 455789999999999999999999996 5899999999999999999999999999752 111
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc----CCCCccceeechhHHHHHHHhCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG----TGHGTTADWWSVGIILFELIVGIP 818 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g----~~ys~ksDIWSLGVILYELLTGk~ 818 (1013)
+ -..+...|--.|||||.+.. .+|+-++||||||++++||.+++.
T Consensus 202 S-------------------------------iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~ 250 (282)
T KOG0984|consen 202 S-------------------------------IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRF 250 (282)
T ss_pred h-------------------------------hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccc
Confidence 0 01112457778999999864 479999999999999999999999
Q ss_pred CCCC-CChhHHHHhhhccCC
Q 001783 819 PFNA-EHPQQIFDNILNRKI 837 (1013)
Q Consensus 819 PF~g-~~~~ei~qkIl~~~~ 837 (1013)
||.. .++.+.+.+++....
T Consensus 251 PY~~w~tpF~qLkqvVeep~ 270 (282)
T KOG0984|consen 251 PYESWGTPFQQLKQVVEEPS 270 (282)
T ss_pred cccccCCHHHHHHHHhcCCC
Confidence 9964 577788888877654
No 405
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.95 E-value=3e-26 Score=232.37 Aligned_cols=261 Identities=39% Similarity=0.695 Sum_probs=210.1
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC-CeeEEEeeeeccceEEEEEE
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNP-FVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HP-NIVkL~e~fed~~~LyLVME 669 (1013)
|.+.+.||.|+||.||++.+. ..+++|.+.............+.+|..++..+.|+ +|+++++.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 788999999999999999987 78999999876554444578899999999999988 79999999988888999999
Q ss_pred eccCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC-cEEEeecCCccccccCCCC
Q 001783 670 YLNGGDLYSLLRNLG---CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-HIKLTDFGLSKVGLINSTD 745 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g---~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG-~VKLiDFGLAk~~~~~s~d 745 (1013)
++.+++|..++.... .+++..+..++.|++.+|.|+|+.|++||||||+||+++..+ .++++|||+++........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999998887664 799999999999999999999999999999999999999988 7999999998731100000
Q ss_pred CCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc---CCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG---TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 746 dls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g---~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
.. ........+||..|+|||.+.+ ..+....|+||+|++++++++|..||..
T Consensus 159 -------------------~~------~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~ 213 (384)
T COG0515 159 -------------------SS------IPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEG 213 (384)
T ss_pred -------------------cc------ccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 00 0012346789999999999988 5788999999999999999999999877
Q ss_pred CCh----hHHHHhhhccCCC-CC-CCCCCC----CHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 823 EHP----QQIFDNILNRKIP-WP-RVPEEM----SPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 823 ~~~----~ei~qkIl~~~~~-~p-~lp~~l----S~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
... ......+.....+ .. ...... ...+.+++.+++..+|..|. +..+...++|...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~---~~~~~~~~~~~~~ 280 (384)
T COG0515 214 EKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRL---SSSSDLSHDLLAH 280 (384)
T ss_pred CCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcC---CHHHHhhchHhhC
Confidence 663 4555555444432 11 111111 25789999999999999999 7777777755543
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=2.8e-28 Score=298.29 Aligned_cols=223 Identities=16% Similarity=0.181 Sum_probs=153.3
Q ss_pred CCeeEEEeee-------eccceEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCce
Q 001783 649 PFVVRFFYSF-------TCRENLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNL 720 (1013)
Q Consensus 649 PNIVkL~e~f-------ed~~~LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNI 720 (1013)
+||++++++| .....++++||++ +++|.+++... ..+++..++.|+.||+.||+|||++|||||||||+||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~Ni 111 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCF 111 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhE
Confidence 4777777776 2334688889988 55999999753 5699999999999999999999999999999999999
Q ss_pred eecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCC--CCcc--cchhhhh---hhhhccccccCCCCCCCchhhc
Q 001783 721 LIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGD--EEPQ--LTASEHQ---QERRKKRSAVGTPDYLAPEILL 793 (1013)
Q Consensus 721 LLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd--~~~~--lt~s~~~---~~~~~~~s~vGTp~YmAPEVL~ 793 (1013)
||+..|.+|++|||++.....+... ...+....+... .... ....... .........+||+.|||||++.
T Consensus 112 Ll~~~~~~k~~d~~~~~~~~~~~~~---~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 188 (793)
T PLN00181 112 VMSSFNHVSFIESASCSDSGSDEDA---TTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDN 188 (793)
T ss_pred EEcccCcEEEeeccccCcccccccC---cccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhc
Confidence 9988888888888887632111000 000000000000 0000 0000000 0000112357999999999999
Q ss_pred cCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHH
Q 001783 794 GTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1013)
Q Consensus 794 g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeE 873 (1013)
+..|+.++|||||||+||||++|.+||.... ..+..+..... +.......+...+++.+||++||.+|| ++.+
T Consensus 189 ~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~~~P~~Rp---s~~e 261 (793)
T PLN00181 189 GSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--PPQILLNWPKEASFCLWLLHPEPSCRP---SMSE 261 (793)
T ss_pred cCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--ChhhhhcCHHHHHHHHHhCCCChhhCc---ChHH
Confidence 9999999999999999999999999876432 22222222211 111112245678999999999999999 9999
Q ss_pred HHhCCCCCC
Q 001783 874 VKQHVFFKD 882 (1013)
Q Consensus 874 LLqHPFFk~ 882 (1013)
+++||||..
T Consensus 262 il~h~~~~~ 270 (793)
T PLN00181 262 LLQSEFINE 270 (793)
T ss_pred Hhhchhhhh
Confidence 999999975
No 407
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3e-27 Score=252.12 Aligned_cols=240 Identities=27% Similarity=0.425 Sum_probs=187.8
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEe-eeeccceEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFY-SFTCRENLY 665 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e-~fed~~~Ly 665 (1013)
.+.|.|.+.||+|-||++.+|+++.++..+++|.+.+... ....|.+|...--.| .|.||+.-|+ .|++.+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t----t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT----TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh----hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 3569999999999999999999999999999999987643 456777887765555 4889998775 688888999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC--CCcEEEeecCCccccccCC
Q 001783 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH--DGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~--dG~VKLiDFGLAk~~~~~s 743 (1013)
++|||++.|+|..-+.. ..+-|...+.++.|++.||.|+|++++||||||.+||||-. .-.|||||||+.+.
T Consensus 99 F~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k----- 172 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRK----- 172 (378)
T ss_pred EeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccc-----
Confidence 99999999999988866 44889999999999999999999999999999999999943 34799999999763
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC---C--CCccceeechhHHHHHHHhCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT---G--HGTTADWWSVGIILFELIVGIP 818 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~---~--ys~ksDIWSLGVILYELLTGk~ 818 (1013)
.|++. ...--+..|.+||+.... . .++.+|+|.||+++|.+|||.+
T Consensus 173 ---------~g~tV--------------------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~ 223 (378)
T KOG1345|consen 173 ---------VGTTV--------------------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKF 223 (378)
T ss_pred ---------cCcee--------------------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCC
Confidence 01110 001234569999987532 2 3678999999999999999999
Q ss_pred CCCCCCh----hHHHHhhhccC-CCCCCCCCCCCHHHHHHHHHhccCCcCCcC
Q 001783 819 PFNAEHP----QQIFDNILNRK-IPWPRVPEEMSPEAHDLIDRFLTEDPHQRL 866 (1013)
Q Consensus 819 PF~g~~~----~ei~qkIl~~~-~~~p~lp~~lS~elkDLI~rMLqkDPekRP 866 (1013)
||..... -.-+.+...+. ...|.....+++.+..+.++.|..+|.+|-
T Consensus 224 PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drc 276 (378)
T KOG1345|consen 224 PWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRC 276 (378)
T ss_pred cchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccc
Confidence 9974321 11233333322 223444456899999999999999999994
No 408
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=1.2e-26 Score=230.03 Aligned_cols=161 Identities=26% Similarity=0.319 Sum_probs=129.7
Q ss_pred CChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCc
Q 001783 674 GDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAV 752 (1013)
Q Consensus 674 GSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~ 752 (1013)
|+|.+++... +.+++..++.++.||+.||+|||+++ ||+|||++.++.+|+ ||+++...
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~------------ 60 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKT------------ 60 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeec------------
Confidence 6899999864 56999999999999999999999998 999999999999999 99987410
Q ss_pred cCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh-hHHHHh
Q 001783 753 SGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP-QQIFDN 831 (1013)
Q Consensus 753 ~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~-~ei~qk 831 (1013)
.....||+.|||||++.+..|+.++|||||||++|||++|+.||..... ...+..
T Consensus 61 ------------------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~ 116 (176)
T smart00750 61 ------------------------PEQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEI 116 (176)
T ss_pred ------------------------cccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHH
Confidence 0012689999999999999999999999999999999999999976543 233333
Q ss_pred hhccCCCC-C---CCCCCCCH--HHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCC
Q 001783 832 ILNRKIPW-P---RVPEEMSP--EAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 832 Il~~~~~~-p---~lp~~lS~--elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk 881 (1013)
+....... + ..+..++. ++.+||.+||..||.+|| ++.++++|+|+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp---~~~~ll~~~~~~ 169 (176)
T smart00750 117 LLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRRE---AANHYLAHCRAL 169 (176)
T ss_pred HHHHhccCCccccccHHHHHhhhhHHHHHHHHHhccccccc---CHHHHHHHHHHH
Confidence 33322111 0 11223334 699999999999999999 999999999875
No 409
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.92 E-value=1.5e-24 Score=239.85 Aligned_cols=252 Identities=20% Similarity=0.285 Sum_probs=204.9
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCC-----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeec-cc
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGD-----LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC-RE 662 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk-----~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed-~~ 662 (1013)
.+++....+-+|.||.||.|.+++... .|-+|.++.. ...-++..++.|.-+|..+.|||+..+.++..+ ..
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~ 361 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA 361 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC
Confidence 457777889999999999998875433 3445655432 234567889999999999999999999887655 45
Q ss_pred eEEEEEEeccCCChHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecC
Q 001783 663 NLYLVMEYLNGGDLYSLLRN--------LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFG 734 (1013)
Q Consensus 663 ~LyLVMEy~~GGSL~dlL~~--------~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFG 734 (1013)
..++++.++.-|+|..++.. .+.++..+...++.|++.|++|||+.||||.||..+|.+|++.-.+||+|=.
T Consensus 362 ~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsa 441 (563)
T KOG1024|consen 362 TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSA 441 (563)
T ss_pred cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccch
Confidence 67888899989999999961 1347888888999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHH
Q 001783 735 LSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELI 814 (1013)
Q Consensus 735 LAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELL 814 (1013)
+++..+.... ..+||+ ......||+||.+.+..|+.++|+|||||+||||+
T Consensus 442 LSRDLFP~DY-----------hcLGDn------------------EnRPvkWMslEal~n~~yssasDvWsfGVllWELm 492 (563)
T KOG1024|consen 442 LSRDLFPGDY-----------HCLGDN------------------ENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELM 492 (563)
T ss_pred hccccCcccc-----------cccCCC------------------CCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHH
Confidence 9984221111 112221 12345799999999999999999999999999999
Q ss_pred h-CCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHh
Q 001783 815 V-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1013)
Q Consensus 815 T-Gk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLq 876 (1013)
| |+.||..-++.++...+..+.. ...|.++++++..++..||..+|++|| +.+|+..
T Consensus 493 tlg~~PyaeIDPfEm~~ylkdGyR--laQP~NCPDeLf~vMacCWallpeeRP---sf~Qlv~ 550 (563)
T KOG1024|consen 493 TLGKLPYAEIDPFEMEHYLKDGYR--LAQPFNCPDELFTVMACCWALLPEERP---SFSQLVI 550 (563)
T ss_pred hcCCCCccccCHHHHHHHHhccce--ecCCCCCcHHHHHHHHHHHhcCcccCC---CHHHHHH
Confidence 8 9999999999999888876653 345789999999999999999999999 7777654
No 410
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=1.2e-25 Score=267.74 Aligned_cols=262 Identities=27% Similarity=0.395 Sum_probs=203.6
Q ss_pred EEEEEeeccCceEEEEEEECCCCCEEEEEEeec---cccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 592 EIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKK---ADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 592 eIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk---~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
.....+|.|++|.|+.+......+.++.|.+.. ...........+..|.-+-..+.|||++..+..+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 456789999999999998887777777776542 12222333333666777777889999988777776666556669
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
|||++ +|+.++...+.+....+..++.||+.||+|||.+||.||||||+|+++..+|.+||+|||.+.+......
T Consensus 401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e---- 475 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE---- 475 (601)
T ss_pred hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcc----
Confidence 99999 9999999888899999999999999999999999999999999999999999999999999875321110
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCc-cceeechhHHHHHHHhCCCCCCCCChhH
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGT-TADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~-ksDIWSLGVILYELLTGk~PF~g~~~~e 827 (1013)
.........+|+..|+|||++.+..|++ .+||||.|++++.|.+|+.||......+
T Consensus 476 -----------------------~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~ 532 (601)
T KOG0590|consen 476 -----------------------KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSD 532 (601)
T ss_pred -----------------------hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccc
Confidence 0012234679999999999999999965 6799999999999999999997544332
Q ss_pred HH--HhhhccCC----CCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCC
Q 001783 828 IF--DNILNRKI----PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1013)
Q Consensus 828 i~--qkIl~~~~----~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Id 884 (1013)
.. ...-.... ....+...++.+.+.+|.+||+.||.+|. |+++|++.+||+.|.
T Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~---ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 533 NSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRI---TIEQILNDEWIRSIE 592 (601)
T ss_pred cchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhhee---cHHHHhhChHhhhcc
Confidence 21 11111110 01123345788999999999999999999 999999999999874
No 411
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=5.3e-24 Score=240.43 Aligned_cols=176 Identities=22% Similarity=0.167 Sum_probs=132.6
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECC-CCCEEEEEEeecccc--ccHHHHHHHHHHHHHHHhcCCCCeeE-EEeeeec
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRT-TGDLFAIKVLKKADM--IRKNAVESILAERDILISVRNPFVVR-FFYSFTC 660 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~-tgk~VALKVlkk~~~--~~~e~ie~~l~Ei~IL~~L~HPNIVk-L~e~fed 660 (1013)
....++|++.+.||+|+||+||+|+++. +++.||||++..... ......+.+.+|+.+|..++|+||+. ++..
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 3445779999999999999999999876 678889998753211 12334567899999999999999985 4432
Q ss_pred cceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccc-CCCceeecCCCcEEEeecCCcccc
Q 001783 661 RENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDL-KPDNLLIAHDGHIKLTDFGLSKVG 739 (1013)
Q Consensus 661 ~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDI-KPeNILLd~dG~VKLiDFGLAk~~ 739 (1013)
+..|||||||+|++|.. +.. .. ...++.|++.||.|||++||+|||| ||+|||++.++.+||+|||+|+..
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-ARP---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hCc---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 45799999999999973 211 11 1467899999999999999999999 999999999999999999999852
Q ss_pred ccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhcc
Q 001783 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG 794 (1013)
Q Consensus 740 ~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g 794 (1013)
..... ...........+.+|++.|+|||.+..
T Consensus 163 ~~~~~-----------------------~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 163 RRRGA-----------------------LYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ccCcc-----------------------hhhhhhhhhhhhhhccCccCCcccCCh
Confidence 11000 000001112236789999999999864
No 412
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=3.1e-23 Score=228.88 Aligned_cols=251 Identities=23% Similarity=0.310 Sum_probs=190.5
Q ss_pred CcEEEEEeeccCceEEEEEEECCCC-CEEEEEEeeccccccHHHHHHHHHHHHHHHhcC----CCCeeEEEeee-eccce
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTG-DLFAIKVLKKADMIRKNAVESILAERDILISVR----NPFVVRFFYSF-TCREN 663 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tg-k~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~----HPNIVkL~e~f-ed~~~ 663 (1013)
.|.+.+.||+|+||.||+|.+..++ ..+|+|+......... ..+..|..++..+. .+++..+++.+ .....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 7999999999999999999998764 6899998765432111 15667888888776 26899999999 57788
Q ss_pred EEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC-----CcEEEeecCCc
Q 001783 664 LYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD-----GHIKLTDFGLS 736 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d-----G~VKLiDFGLA 736 (1013)
-|+||+.+ |.+|.++.... +.++...+..++.|++.+|++||+.|+|||||||.|+++... ..+.|.|||+|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999988 77999988654 579999999999999999999999999999999999999865 36999999999
Q ss_pred ccc--ccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHH
Q 001783 737 KVG--LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELI 814 (1013)
Q Consensus 737 k~~--~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELL 814 (1013)
+.. ....... ............||..|+++.+..+...+...|+||++.++.+|+
T Consensus 175 r~~~~~~~~~~~-----------------------~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~ 231 (322)
T KOG1164|consen 175 RRFKYVGDSGGN-----------------------LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELL 231 (322)
T ss_pred ccccccCCCCcc-----------------------cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHh
Confidence 831 1110000 000011123467999999999999999999999999999999999
Q ss_pred hCCCCCCCCChhHHHHhhhccCCCC--CCCCCCCCHHHHHHHHHhccCCcCCcCC
Q 001783 815 VGIPPFNAEHPQQIFDNILNRKIPW--PRVPEEMSPEAHDLIDRFLTEDPHQRLG 867 (1013)
Q Consensus 815 TGk~PF~g~~~~ei~qkIl~~~~~~--p~lp~~lS~elkDLI~rMLqkDPekRPg 867 (1013)
.|..||.+.........+....... .......+.++..+...+-..+...+|.
T Consensus 232 ~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pd 286 (322)
T KOG1164|consen 232 KGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPD 286 (322)
T ss_pred cCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCC
Confidence 9999997654322222222211111 1122345677888888888788899993
No 413
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.8e-22 Score=212.99 Aligned_cols=275 Identities=22% Similarity=0.305 Sum_probs=209.6
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC-CCeeEEEeeeeccceEE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN-PFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~H-PNIVkL~e~fed~~~Ly 665 (1013)
....|.++++||.|+||.+|+|....+|..||||+-.... ....+.-|..+...+++ ..|+.+..++.+..+-.
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV 87 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence 4578999999999999999999999999999999865432 12345678888888875 67888888899999999
Q ss_pred EEEEeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC---CcEEEeecCCcccccc
Q 001783 666 LVMEYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD---GHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL~~-~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d---G~VKLiDFGLAk~~~~ 741 (1013)
|||+++ |.+|.++..- ...++...+...+-|++.-|+|+|.+++|||||||+|+|+.-+ ..+.|+|||+|+....
T Consensus 88 lVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 88 LVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred eeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 999998 7799888743 2568999999999999999999999999999999999999754 4689999999985221
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
..+. .....+..+...||..|.+-....+...+...|+-|+|.+|..+.-|..||.
T Consensus 167 ~~t~------------------------~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQ 222 (341)
T KOG1163|consen 167 IRTR------------------------QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQ 222 (341)
T ss_pred cccc------------------------ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccc
Confidence 1110 0111223456789999999988888888999999999999999999999998
Q ss_pred CC---ChhHHHHhhhccCCCCC--CCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCC-------CCChhhHh
Q 001783 822 AE---HPQQIFDNILNRKIPWP--RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK-------DINWDTLA 889 (1013)
Q Consensus 822 g~---~~~ei~qkIl~~~~~~p--~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk-------~Idw~~L~ 889 (1013)
+- +..+-+++|...+...| .+-.++|.++.-.|.-|-..--++-|...=..++..--|+. -.||..+.
T Consensus 223 glka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~lk 302 (341)
T KOG1163|consen 223 GLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTMLK 302 (341)
T ss_pred ccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHHH
Confidence 64 44566777776655433 23467888888888888777666666332233333222221 24788876
Q ss_pred hh
Q 001783 890 RQ 891 (1013)
Q Consensus 890 ~~ 891 (1013)
++
T Consensus 303 qk 304 (341)
T KOG1163|consen 303 QK 304 (341)
T ss_pred HH
Confidence 54
No 414
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=7e-22 Score=215.80 Aligned_cols=247 Identities=22% Similarity=0.329 Sum_probs=192.3
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccceEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~LyLVM 668 (1013)
.|++.++||+|+||..++|.+.-++++||||.-.... ..-.+..|....+.|. .++|...|++.++..+-.|||
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC-----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 5999999999999999999999999999999864322 2245566777777664 689999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC-----cEEEeecCCccccccC
Q 001783 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-----HIKLTDFGLSKVGLIN 742 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG-----~VKLiDFGLAk~~~~~ 742 (1013)
|++ |-+|.++..-- ..|+...+..++.|++.-++|+|++.+|+|||||+|+||..-+ .|.|+|||+|+...-.
T Consensus 104 dLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred hhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 998 77998888654 4699999999999999999999999999999999999997543 5899999999953221
Q ss_pred CCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC
Q 001783 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1013)
Q Consensus 743 s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~g 822 (1013)
.+. .....+...+..||.+||+-...+|...+...|+-|||-++...|-|..||.+
T Consensus 183 ~Tk------------------------qHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG 238 (449)
T KOG1165|consen 183 KTK------------------------QHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 238 (449)
T ss_pred ccc------------------------ccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence 111 11122344577899999999999999999999999999999999999999975
Q ss_pred ---CChhHHHHhhhccCCCCC--CCCCCCCHHHHHHHHHhccCCcCCcC
Q 001783 823 ---EHPQQIFDNILNRKIPWP--RVPEEMSPEAHDLIDRFLTEDPHQRL 866 (1013)
Q Consensus 823 ---~~~~ei~qkIl~~~~~~p--~lp~~lS~elkDLI~rMLqkDPekRP 866 (1013)
.+..+-+++|-..+..-| .+-.+++.++..-++-.-..+-.+-|
T Consensus 239 LKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~P 287 (449)
T KOG1165|consen 239 LKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETP 287 (449)
T ss_pred ccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCC
Confidence 566777777765443222 22345666655555444333444444
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.86 E-value=6.9e-22 Score=203.96 Aligned_cols=140 Identities=25% Similarity=0.214 Sum_probs=110.9
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHH-----------------------HHHHHHHHHHHHHhcCCCC
Q 001783 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKN-----------------------AVESILAERDILISVRNPF 650 (1013)
Q Consensus 594 lk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e-----------------------~ie~~l~Ei~IL~~L~HPN 650 (1013)
...||+|+||.||+|.+. +|+.||+|+++........ .......|..+|..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 457999999999999996 8999999999764321111 0123345999999998777
Q ss_pred eeEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCeeecccCCCceeecCCCcEE
Q 001783 651 VVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYL-HSLRVVHRDLKPDNLLIAHDGHIK 729 (1013)
Q Consensus 651 IVkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYL-Hs~GIIHRDIKPeNILLd~dG~VK 729 (1013)
+...... ... ..+|||||++|++|...+.+.+.+++..+..++.||+.+|.|| |+.||+||||||+|||++ ++.++
T Consensus 81 v~~p~~~-~~~-~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~ 157 (190)
T cd05147 81 IPCPEPI-LLK-SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLY 157 (190)
T ss_pred CCCCcEE-Eec-CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEE
Confidence 6433222 222 2389999999988876654557899999999999999999999 799999999999999998 58899
Q ss_pred EeecCCcc
Q 001783 730 LTDFGLSK 737 (1013)
Q Consensus 730 LiDFGLAk 737 (1013)
|+|||+|.
T Consensus 158 LiDFG~a~ 165 (190)
T cd05147 158 IIDVSQSV 165 (190)
T ss_pred EEEccccc
Confidence 99999987
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.85 E-value=7.1e-21 Score=195.12 Aligned_cols=141 Identities=23% Similarity=0.148 Sum_probs=112.5
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccH-----------------------HHHHHHHHHHHHHHhcCCCC
Q 001783 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRK-----------------------NAVESILAERDILISVRNPF 650 (1013)
Q Consensus 594 lk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~-----------------------e~ie~~l~Ei~IL~~L~HPN 650 (1013)
.+.||+|+||.||+|.+. +|+.||||+++....... .......+|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999987 899999999986521100 01223467899999999998
Q ss_pred eeEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEE
Q 001783 651 VVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIK 729 (1013)
Q Consensus 651 IVkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VK 729 (1013)
|.....+... ..||||||++|+++.........+++..+..++.|++.+|.+||. +||+||||||+|||++ ++.++
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~ 157 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPY 157 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEE
Confidence 7544333322 248999999998665443344678889999999999999999999 9999999999999998 89999
Q ss_pred EeecCCccc
Q 001783 730 LTDFGLSKV 738 (1013)
Q Consensus 730 LiDFGLAk~ 738 (1013)
|+|||+|+.
T Consensus 158 liDFG~a~~ 166 (190)
T cd05145 158 IIDVSQAVE 166 (190)
T ss_pred EEEccccee
Confidence 999999974
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.85 E-value=7.2e-21 Score=203.09 Aligned_cols=138 Identities=17% Similarity=0.211 Sum_probs=114.9
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHH------HHHHHHHHHhcCCCCeeEEEeeeecc-
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVES------ILAERDILISVRNPFVVRFFYSFTCR- 661 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~------~l~Ei~IL~~L~HPNIVkL~e~fed~- 661 (1013)
++|++++.||.|+||.||++.. ++..+|+|++............. +.+|+..+.++.||+|..+..++...
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred CceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 5799999999999999999765 46689999997654444444444 57899999999999999998886644
Q ss_pred -------ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecC
Q 001783 662 -------ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFG 734 (1013)
Q Consensus 662 -------~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFG 734 (1013)
...+|||||++|.+|.++. .+++. .+.+|+.+|..||+.|++||||||+|||++.+| ++|+|||
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg 179 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMP----EISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLS 179 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhh----hccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECC
Confidence 3589999999999998873 23332 456999999999999999999999999999988 9999999
Q ss_pred Ccc
Q 001783 735 LSK 737 (1013)
Q Consensus 735 LAk 737 (1013)
..+
T Consensus 180 ~~~ 182 (232)
T PRK10359 180 GKR 182 (232)
T ss_pred Ccc
Confidence 876
No 418
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.84 E-value=1.3e-20 Score=206.61 Aligned_cols=233 Identities=26% Similarity=0.356 Sum_probs=150.9
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC----------CCeeEEEee---
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN----------PFVVRFFYS--- 657 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~H----------PNIVkL~e~--- 657 (1013)
+...+.||.|+++.||.+.+..||+.+|+|++...........+.+.+|.-....+.+ -.++..++.
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 6677899999999999999999999999999876554444456666666544433222 111111111
Q ss_pred ------eecc---c-----eEEEEEEeccCCChHHHHHh---cCCC---CHHHHHH-HHHHHHHHHHHHHhCCeeecccC
Q 001783 658 ------FTCR---E-----NLYLVMEYLNGGDLYSLLRN---LGCL---DEDVARV-YIAEVVLALEYLHSLRVVHRDLK 716 (1013)
Q Consensus 658 ------fed~---~-----~LyLVMEy~~GGSL~dlL~~---~g~L---sE~~ar~-Ia~QIL~ALeYLHs~GIIHRDIK 716 (1013)
+... . +.+++|+-+.+ ||.+++.- .... ....++. +..|++..+++||+.||+|+|||
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred cCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 1111 1 34778888854 88887642 2222 1223333 34799999999999999999999
Q ss_pred CCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-
Q 001783 717 PDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT- 795 (1013)
Q Consensus 717 PeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~- 795 (1013)
|+|++++.+|.++|+||+..... | ........+..|.+||.....
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~--------------g--------------------~~~~~~~~~~~~~PPe~~~~~~ 218 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRA--------------G--------------------TRYRCSEFPVAFTPPELESCAG 218 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEET--------------T--------------------EEEEGGGS-TTTS-HHHHHHHT
T ss_pred eeeEEEcCCCCEEEcChHHHeec--------------C--------------------ceeeccCCCcccCChhhhhhhc
Confidence 99999999999999999876520 0 001112345779999987542
Q ss_pred -------CCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCc
Q 001783 796 -------GHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQR 865 (1013)
Q Consensus 796 -------~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekR 865 (1013)
.++.+.|.|+||+++|.|+||..||........... .|..+. ++++..++||.+||++||.+|
T Consensus 219 ~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 219 QFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 468899999999999999999999987654332221 233444 789999999999999999988
No 419
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.84 E-value=6.3e-22 Score=238.85 Aligned_cols=244 Identities=27% Similarity=0.379 Sum_probs=184.2
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccc-cccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKAD-MIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~-~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVM 668 (1013)
+|...+.||.+-|=+|.+|++.+ | .|++||+-+.. ...-......+.|+. ...++|||++.+.-+-......|||-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 68889999999999999998853 4 49999987654 222223333344444 56678999999988877888899999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
+|... +|++.+...+.+..-+.++|+.||+.||.-+|+.||+|+|||.+||||+.-+.+.|+||..-|.....
T Consensus 101 qyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP------ 173 (1431)
T KOG1240|consen 101 QYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP------ 173 (1431)
T ss_pred HHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCC------
Confidence 99976 99999998888999999999999999999999999999999999999999999999999865531111
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC-----------CCccceeechhHHHHHHHh-C
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG-----------HGTTADWWSVGIILFELIV-G 816 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~-----------ys~ksDIWSLGVILYELLT-G 816 (1013)
.|+-..++.+.. +...-..|+|||.+.... .+++.||||+||++.||++ |
T Consensus 174 ----------eDNPadf~fFFD--------TSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg 235 (1431)
T KOG1240|consen 174 ----------EDNPADFTFFFD--------TSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEG 235 (1431)
T ss_pred ----------CCCcccceEEEe--------cCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcC
Confidence 111111111110 111123599999986522 4678899999999999997 8
Q ss_pred CCCCCCC-----------ChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 817 IPPFNAE-----------HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 817 k~PF~g~-----------~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.|||.-. +++..+++| -+..++.||..|++.||.+|+ +|++.|+.
T Consensus 236 ~PlF~LSQL~aYr~~~~~~~e~~Le~I-------------ed~~~Rnlil~Mi~rdPs~Rl---SAedyL~~ 291 (1431)
T KOG1240|consen 236 RPLFTLSQLLAYRSGNADDPEQLLEKI-------------EDVSLRNLILSMIQRDPSKRL---SAEDYLQK 291 (1431)
T ss_pred CCcccHHHHHhHhccCccCHHHHHHhC-------------cCccHHHHHHHHHccCchhcc---CHHHHHHh
Confidence 9999421 222222222 123679999999999999999 99999987
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=5.3e-21 Score=212.39 Aligned_cols=273 Identities=27% Similarity=0.378 Sum_probs=190.8
Q ss_pred CcccCCcEEEEEeeccCceEEEEEEECCCC-----------------------------------CEEEEEEeeccccc-
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTG-----------------------------------DLFAIKVLKKADMI- 628 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkG~FGtVyLArdk~tg-----------------------------------k~VALKVlkk~~~~- 628 (1013)
++.+++|+|...||+|....||.|+...+| -+.|||.+-.....
T Consensus 153 kFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s 232 (598)
T KOG4158|consen 153 KFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDS 232 (598)
T ss_pred ccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCC
Confidence 567899999999999999999998754311 12456655322211
Q ss_pred -cHHHHHHHHHHHH------HH--------Hh--------cCCCCeeEEEeeeecc------------------------
Q 001783 629 -RKNAVESILAERD------IL--------IS--------VRNPFVVRFFYSFTCR------------------------ 661 (1013)
Q Consensus 629 -~~e~ie~~l~Ei~------IL--------~~--------L~HPNIVkL~e~fed~------------------------ 661 (1013)
.....+.+.+|.- ++ +. -.|||||+++.+|.+.
T Consensus 233 ~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~ 312 (598)
T KOG4158|consen 233 GDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGA 312 (598)
T ss_pred chHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccccc
Confidence 1112222323321 11 11 2599999999888653
Q ss_pred ---ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeec--CCC--cEEEeecC
Q 001783 662 ---ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIA--HDG--HIKLTDFG 734 (1013)
Q Consensus 662 ---~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd--~dG--~VKLiDFG 734 (1013)
..+|+||..++. +|..++.. ...+....+.++.|+++|+.|||++||.|||+|.+|||+. +++ .+.|+|||
T Consensus 313 g~~~tlylvMkrY~~-tLr~yl~~-~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFG 390 (598)
T KOG4158|consen 313 GEPKTLYLVMKRYRQ-TLREYLWT-RHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFG 390 (598)
T ss_pred CCCceEEEehhcchh-hHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccc
Confidence 248999999876 99999866 3467788889999999999999999999999999999994 344 57899999
Q ss_pred CccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCC------CccceeechhH
Q 001783 735 LSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH------GTTADWWSVGI 808 (1013)
Q Consensus 735 LAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~y------s~ksDIWSLGV 808 (1013)
.+-- +..+.+.-+..+ ..-..-|....||||+....+- -.++|.|+.|.
T Consensus 391 CcLA---d~~hGlqlpy~S----------------------~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~Ga 445 (598)
T KOG4158|consen 391 CCLA---DDNHGLQLPYES----------------------DEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGA 445 (598)
T ss_pred eeee---cccccccccccc----------------------ccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhh
Confidence 8752 222212211111 0112457788999999875331 25789999999
Q ss_pred HHHHHHhCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCCCh
Q 001783 809 ILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINW 885 (1013)
Q Consensus 809 ILYELLTGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~Idw 885 (1013)
+.||+++...||++....-+ ..-.-..-++|.+|+.+++.+++|+..+|+.||.+|++..-|..+++--.|..-+|
T Consensus 446 laYEIfg~~NPFY~rGem~L-~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~LsLw~~~~~ 521 (598)
T KOG4158|consen 446 LAYEIFGRSNPFYKRGEMLL-DTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNLSLWRMGED 521 (598)
T ss_pred hHHHHhccCCcccccchhee-chhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHHHHHhcCchH
Confidence 99999999999987432211 11111233567889999999999999999999999998777777877655554444
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=1.9e-19 Score=190.07 Aligned_cols=203 Identities=21% Similarity=0.238 Sum_probs=143.7
Q ss_pred EEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccH-HHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccceEEEEEE
Q 001783 592 EIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRK-NAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 592 eIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~-e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~LyLVME 669 (1013)
.+...|+.|+||+|+++.. .+..++.+.+........ -....+.+|+++|+++. |++|++++++ +..|++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 4567899999999998765 577788776654432111 12235789999999995 4789999875 45799999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccc-CCCceeecCCCcEEEeecCCccccccCCCCCCC
Q 001783 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDL-KPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDI-KPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls 748 (1013)
|+.|.+|...+.. . ...++.|++.+|+++|++||+|||| ||+|||++.+|.++|+|||+|........
T Consensus 79 yI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~---- 147 (218)
T PRK12274 79 YLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR---- 147 (218)
T ss_pred eecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch----
Confidence 9999998765422 1 1357889999999999999999999 79999999999999999999974110000
Q ss_pred CCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccC-CCC-ccceeechhHHHHHHHhCCCCCCCCCh
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHG-TTADWWSVGIILFELIVGIPPFNAEHP 825 (1013)
Q Consensus 749 ~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys-~ksDIWSLGVILYELLTGk~PF~g~~~ 825 (1013)
..-.+.......- .+.-..+++.|+.|+...-. ..+ ...+|++.|+-+|.++|+..|+.+++.
T Consensus 148 ------------~~r~L~~rDl~~l--lk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 148 ------------WMRLLAREDLRHL--LKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred ------------HHHHHHHHHHHHH--HHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 0000000000000 01112378899999876432 223 567999999999999999999876543
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.79 E-value=9.1e-19 Score=184.45 Aligned_cols=135 Identities=16% Similarity=0.214 Sum_probs=108.6
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-----CCCCeeEEEeeeeccc---eEE
Q 001783 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-----RNPFVVRFFYSFTCRE---NLY 665 (1013)
Q Consensus 594 lk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-----~HPNIVkL~e~fed~~---~Ly 665 (1013)
.+.||+|+||.||. +..++.. +||++..... ...+.+.+|+.+++.+ +||||++++++++++. .++
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 46799999999995 7777666 6998865422 2346789999999999 6799999999999874 444
Q ss_pred -EEEEe--ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHhCCeeecccCCCceeecCC----CcEEEeecCCcc
Q 001783 666 -LVMEY--LNGGDLYSLLRNLGCLDEDVARVYIAEVVLAL-EYLHSLRVVHRDLKPDNLLIAHD----GHIKLTDFGLSK 737 (1013)
Q Consensus 666 -LVMEy--~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~AL-eYLHs~GIIHRDIKPeNILLd~d----G~VKLiDFGLAk 737 (1013)
+|||| +.+|+|.+++.+ +.+++. ..++.|++.++ +|||+++||||||||+|||++.. +.++|+||+.+.
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred EEEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 78999 557999999976 456666 35688888888 99999999999999999999743 379999955443
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.77 E-value=1.7e-18 Score=184.98 Aligned_cols=143 Identities=22% Similarity=0.139 Sum_probs=115.1
Q ss_pred CcEEEEEeeccCceEEEEEE-ECCCCCEEEEEEeecccccc---------------------HHHHHHHHHHHHHHHhcC
Q 001783 590 DFEIIKPISRGAFGRVFLAK-KRTTGDLFAIKVLKKADMIR---------------------KNAVESILAERDILISVR 647 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLAr-dk~tgk~VALKVlkk~~~~~---------------------~e~ie~~l~Ei~IL~~L~ 647 (1013)
.|.+.+.||+|+||.||+|. +..+|+.||||+++...... ......+.+|..++..+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 38888999999999999999 67789999999997543110 001234568999999997
Q ss_pred CC--CeeEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCCCceeecC
Q 001783 648 NP--FVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLR-VVHRDLKPDNLLIAH 724 (1013)
Q Consensus 648 HP--NIVkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~G-IIHRDIKPeNILLd~ 724 (1013)
+. .++++++. ...||||||++|++|...+.....+....+..++.||+.+|.+||..| |+||||||+|||++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~- 183 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH- 183 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence 53 34455542 235899999999888776644456777778899999999999999999 99999999999999
Q ss_pred CCcEEEeecCCcc
Q 001783 725 DGHIKLTDFGLSK 737 (1013)
Q Consensus 725 dG~VKLiDFGLAk 737 (1013)
++.++|+|||.|.
T Consensus 184 ~~~i~LiDFg~a~ 196 (237)
T smart00090 184 DGKVVIIDVSQSV 196 (237)
T ss_pred CCCEEEEEChhhh
Confidence 8899999999987
No 424
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.75 E-value=7.5e-19 Score=188.02 Aligned_cols=243 Identities=20% Similarity=0.328 Sum_probs=196.0
Q ss_pred CCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce
Q 001783 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 584 ~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~ 663 (1013)
.+..+.+..++.+|.+...|+.|++++.. ..++.|+++..... ...-..|..|.-.|+.+.||||+.+++++....+
T Consensus 185 ~gid~~~lnl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t-~risrdfneefp~lrifshpnilpvlgacnsppn 261 (448)
T KOG0195|consen 185 TGIDVSSLNLITKLAESHSGELWRGRWQG--NDIVAKILNVREVT-ARISRDFNEEFPALRIFSHPNILPVLGACNSPPN 261 (448)
T ss_pred cCcchhhhhhhhhhccCCCcccccccccC--cchhhhhhhhhhcc-hhhcchhhhhCcceeeecCCchhhhhhhccCCCC
Confidence 35667788889999999999999999953 34566887654432 2234677888888989999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCC--eeecccCCCceeecCCCcEEEe--ecCCcc
Q 001783 664 LYLVMEYLNGGDLYSLLRNLGC--LDEDVARVYIAEVVLALEYLHSLR--VVHRDLKPDNLLIAHDGHIKLT--DFGLSK 737 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g~--LsE~~ar~Ia~QIL~ALeYLHs~G--IIHRDIKPeNILLd~dG~VKLi--DFGLAk 737 (1013)
+.++..||+.|+|+.+++.... ++..++..++.+|+.|++|||+.. |.---|....++|+++-..+|+ |--++.
T Consensus 262 lv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf 341 (448)
T KOG0195|consen 262 LVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF 341 (448)
T ss_pred ceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee
Confidence 9999999999999999987643 688899999999999999999864 3334578888999988776653 322221
Q ss_pred ccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCC---CccceeechhHHHHHHH
Q 001783 738 VGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH---GTTADWWSVGIILFELI 814 (1013)
Q Consensus 738 ~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~y---s~ksDIWSLGVILYELL 814 (1013)
. .....-.|.||+||.+...+- -.++|+|||++++|||.
T Consensus 342 q--------------------------------------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~ 383 (448)
T KOG0195|consen 342 Q--------------------------------------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELN 383 (448)
T ss_pred e--------------------------------------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhh
Confidence 0 112345789999999987654 36789999999999999
Q ss_pred hCCCCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCC
Q 001783 815 VGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS 868 (1013)
Q Consensus 815 TGk~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~ 868 (1013)
|...||..-++.+.-.+|...... +.+|++++.....|+.-|+..||.+||.+
T Consensus 384 trevpfadlspmecgmkialeglr-v~ippgis~hm~klm~icmnedpgkrpkf 436 (448)
T KOG0195|consen 384 TREVPFADLSPMECGMKIALEGLR-VHIPPGISRHMNKLMNICMNEDPGKRPKF 436 (448)
T ss_pred ccccccccCCchhhhhhhhhcccc-ccCCCCccHHHHHHHHHHhcCCCCcCCCc
Confidence 999999998888877777665543 57889999999999999999999999943
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=1.2e-18 Score=213.95 Aligned_cols=194 Identities=23% Similarity=0.349 Sum_probs=155.0
Q ss_pred cCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC---CCCeeEEEeeeeccceE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR---NPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~---HPNIVkL~e~fed~~~L 664 (1013)
.+.|.|-+.||+|+||+||.|.+.. |+.||||+-+....-. +.--.+++.+|+ -+-|..+..++.-.+.-
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE------fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE------FYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee------eeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 3569999999999999999999976 9999999977654211 111222333333 23455555666666778
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC-------CCcEEEeecCCcc
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-------DGHIKLTDFGLSK 737 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-------dG~VKLiDFGLAk 737 (1013)
+||+||.+.|+|.+++...+.+++..+.+++.|++..|+.||..+|||+||||+|+||.. +--++|+|||-+.
T Consensus 770 ~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred eeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 999999999999999998889999999999999999999999999999999999999953 2359999999876
Q ss_pred ccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCC
Q 001783 738 VGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGI 817 (1013)
Q Consensus 738 ~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk 817 (1013)
-. .... ...+....++|-.+-.+|+..|.++++.+|.|.|+.++|.||.|+
T Consensus 850 Dm---------~lfp--------------------~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 850 DM---------KLFP--------------------DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred ee---------eEcC--------------------CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 20 0000 112344578899999999999999999999999999999999985
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=8.9e-18 Score=172.23 Aligned_cols=137 Identities=29% Similarity=0.348 Sum_probs=114.7
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccc-----cHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI-----RKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~-----~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
+.||+|++|.||+|.+ .|..+++|+....... .......+.+|..++..+.|++|+....++.+....++|||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 5799999999999987 6778999986543221 11223567889999999999988777666777778899999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
|++|++|.+++..... ....++.+|+.+|.+||+.|++|+|++|.|||++ ++.++|+|||++..
T Consensus 80 ~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999999865432 7788999999999999999999999999999999 78999999999873
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=1.7e-19 Score=215.36 Aligned_cols=263 Identities=27% Similarity=0.433 Sum_probs=210.8
Q ss_pred cCCcEEEEEeeccCceEEEEEEEC-CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccceEE
Q 001783 588 IDDFEIIKPISRGAFGRVFLAKKR-TTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 588 lddYeIlk~LGkG~FGtVyLArdk-~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~Ly 665 (1013)
...|.+.+.||+|+|+.|-++... .....+|+|.+.... ........+..|..+-..+. |+|++.+++.....+..+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 456999999999999999998874 345567777766543 23445566777888888887 999999999999999999
Q ss_pred EEEEeccCCChHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHH-hCCeeecccCCCceeecCCC-cEEEeecCCcccccc
Q 001783 666 LVMEYLNGGDLYSLL-RNLG-CLDEDVARVYIAEVVLALEYLH-SLRVVHRDLKPDNLLIAHDG-HIKLTDFGLSKVGLI 741 (1013)
Q Consensus 666 LVMEy~~GGSL~dlL-~~~g-~LsE~~ar~Ia~QIL~ALeYLH-s~GIIHRDIKPeNILLd~dG-~VKLiDFGLAk~~~~ 741 (1013)
++++|..|++++.-+ .... ..+...+..++.|+..+|.|+| ..++.||||||+|.+++..+ .++++|||+|.....
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999999999 5554 6788899999999999999999 99999999999999999999 999999999974211
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccC-CCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCC
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVG-TPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPP 819 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vG-Tp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTGk~P 819 (1013)
. ..........+| ++.|+|||...+. ......|+||.|+++.-+++|..|
T Consensus 178 ~----------------------------~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p 229 (601)
T KOG0590|consen 178 K----------------------------NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELP 229 (601)
T ss_pred c----------------------------CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCC
Confidence 0 001122334678 9999999999985 457889999999999999999999
Q ss_pred CCCCChhHH-HHhhhccCCC-CCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 820 FNAEHPQQI-FDNILNRKIP-WPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 820 F~g~~~~ei-~qkIl~~~~~-~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
+........ +......... -...+..++..+.+++.++|..+|..|. +.+++..+||+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~---s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 230 WDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRL---SIEELKLDNWLSS 291 (601)
T ss_pred ccccccccccceeecccccccccCccccCChhhhhcccccccCCchhcc---ccccccccccccc
Confidence 975443332 2222222211 1234567899999999999999999999 9999999999987
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.72 E-value=2.9e-17 Score=167.24 Aligned_cols=133 Identities=26% Similarity=0.287 Sum_probs=107.4
Q ss_pred EeeccCceEEEEEEECCCCCEEEEEEeeccccc-----cHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEe
Q 001783 596 PISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI-----RKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1013)
Q Consensus 596 ~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~-----~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy 670 (1013)
.||+|+||+||+|.+ ++..+++|+....... .......+.+|..++..+.|+++.....++......++||||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 389999999999984 5788999986542211 122346778999999999888655444444556677999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 671 LNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 671 ~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
++|++|.+++..... .++.|++.+|.+||+.|++|+|++|.|||++ ++.++++|||++..
T Consensus 79 ~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999998765321 7889999999999999999999999999999 89999999999874
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.71 E-value=4.2e-17 Score=167.48 Aligned_cols=136 Identities=20% Similarity=0.208 Sum_probs=107.8
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccH-------------------HHHHHHHHHHHHHHhcCCC--
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRK-------------------NAVESILAERDILISVRNP-- 649 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~-------------------e~ie~~l~Ei~IL~~L~HP-- 649 (1013)
|.+.+.||.|+||.||+|... +|+.||||++........ ........|..++..+.|+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 777889999999999999874 799999999765321000 1112366788889888777
Q ss_pred CeeEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEE
Q 001783 650 FVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIK 729 (1013)
Q Consensus 650 NIVkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VK 729 (1013)
.++..+. ....|+||||++|++|..+... .....++.+|+.++.++|..||+||||||+||+++.++.++
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~ 165 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIY 165 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEE
Confidence 4444443 2346899999999998765431 34567889999999999999999999999999999999999
Q ss_pred EeecCCcc
Q 001783 730 LTDFGLSK 737 (1013)
Q Consensus 730 LiDFGLAk 737 (1013)
|+|||++.
T Consensus 166 liDfg~~~ 173 (198)
T cd05144 166 IIDWPQMV 173 (198)
T ss_pred EEECCccc
Confidence 99999986
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=1.4e-16 Score=188.04 Aligned_cols=138 Identities=25% Similarity=0.225 Sum_probs=111.6
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeecccc-----ccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM-----IRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~-----~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~L 664 (1013)
.|...+.||+|+||+||++.+... .+++|+...... ......+.+.+|+.++..++|++|+....++......
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred ccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 356678999999999999987543 344444322111 1122346788999999999999998877777777778
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
++||||++|++|.+++. ....++.|++.+|.|||+.||+||||||+|||+ .++.++|+|||+++.
T Consensus 412 ~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999999885 346789999999999999999999999999999 678999999999984
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.68 E-value=1.7e-16 Score=159.81 Aligned_cols=136 Identities=22% Similarity=0.265 Sum_probs=98.7
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHH---------------------HHHHHHHHHHhcCCCC--
Q 001783 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVE---------------------SILAERDILISVRNPF-- 650 (1013)
Q Consensus 594 lk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie---------------------~~l~Ei~IL~~L~HPN-- 650 (1013)
.+.||+|+||+||+|.+. +++.||||++............ ....|...+..+.+.+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999986 8999999998764321111111 1135566666654432
Q ss_pred eeEEEeeeeccceEEEEEEeccCCChHHH-HHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcE
Q 001783 651 VVRFFYSFTCRENLYLVMEYLNGGDLYSL-LRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHI 728 (1013)
Q Consensus 651 IVkL~e~fed~~~LyLVMEy~~GGSL~dl-L~~~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~V 728 (1013)
+.+.+.. ...++||||++|+.+... +.... . ...++.++.+++.++.++|. .||+||||||+||+++ ++.+
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~ 153 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKV 153 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh-h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcE
Confidence 4455443 235899999999544321 11111 1 16688899999999999999 9999999999999999 8999
Q ss_pred EEeecCCcc
Q 001783 729 KLTDFGLSK 737 (1013)
Q Consensus 729 KLiDFGLAk 737 (1013)
+|+|||.+.
T Consensus 154 ~liDfg~a~ 162 (187)
T cd05119 154 YIIDVPQAV 162 (187)
T ss_pred EEEECcccc
Confidence 999999986
No 432
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=1.4e-17 Score=191.45 Aligned_cols=183 Identities=28% Similarity=0.449 Sum_probs=137.0
Q ss_pred ceEEEEEEeccCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNLG---CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~dlL~~~g---~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
.++||.|++|.-.+|.++|.+.. ..+......++.|++.|++| +|.+|||+||.||....++.+||.|||+...
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence 36899999999999999997543 36777888999999999999 9999999999999999999999999999763
Q ss_pred cccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CC
Q 001783 739 GLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GI 817 (1013)
Q Consensus 739 ~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-Gk 817 (1013)
..... . .. .........+||..||+||.+.+..|+.++||||||+||+||+. -.
T Consensus 406 ~~~~~-----~--------------~~------~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~ 460 (516)
T KOG1033|consen 406 QDKDE-----T--------------VA------PAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFS 460 (516)
T ss_pred cccCC-----c--------------cc------chhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhc
Confidence 11100 0 00 01112345689999999999999999999999999999999997 23
Q ss_pred CCCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 818 PPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 818 ~PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
.+|. ....+..+..+.++ |.+..+. ++-.+|+.+||...|.+|| ++.+.--|+|.
T Consensus 461 T~~e---r~~t~~d~r~g~ip-~~~~~d~-p~e~~ll~~lls~~p~~RP---~~~~~~~~~~~ 515 (516)
T KOG1033|consen 461 TQFE---RIATLTDIRDGIIP-PEFLQDY-PEEYTLLQQLLSPSPEERP---SAIEVALHEFL 515 (516)
T ss_pred cHHH---HHHhhhhhhcCCCC-hHHhhcC-cHHHHHHHHhcCCCcccCc---hHHHHhhhhhc
Confidence 3332 12223333333322 1222222 4567899999999999999 78777777764
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.63 E-value=2.4e-15 Score=141.61 Aligned_cols=132 Identities=23% Similarity=0.305 Sum_probs=112.3
Q ss_pred EEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC--CCeeEEEeeeeccceEEEEEEe
Q 001783 593 IIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN--PFVVRFFYSFTCRENLYLVMEY 670 (1013)
Q Consensus 593 Ilk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~H--PNIVkL~e~fed~~~LyLVMEy 670 (1013)
+++.||.|.++.||++.... ..+++|++..... ...+.+|..++..+.| .++++++..+...+..|++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 45789999999999999843 7899999865432 3567889999999976 5899999988888889999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 671 LNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSL---RVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 671 ~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~---GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
++|+.+..+ +......++.+++.+|++||.. +++|+|++|+|||++..+.++++|||++..
T Consensus 75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 999777644 5566677889999999999984 799999999999999989999999999874
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.61 E-value=6.9e-15 Score=157.45 Aligned_cols=137 Identities=20% Similarity=0.327 Sum_probs=106.1
Q ss_pred EEee-ccCceEEEEEEECCCCCEEEEEEeeccccc----------cHHHHHHHHHHHHHHHhcCCCCe--eEEEeeeecc
Q 001783 595 KPIS-RGAFGRVFLAKKRTTGDLFAIKVLKKADMI----------RKNAVESILAERDILISVRNPFV--VRFFYSFTCR 661 (1013)
Q Consensus 595 k~LG-kG~FGtVyLArdk~tgk~VALKVlkk~~~~----------~~e~ie~~l~Ei~IL~~L~HPNI--VkL~e~fed~ 661 (1013)
..|| .||.|+||.+... +..++||.+...... .......+.+|..++..+.|++| ++.+.+....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 7888889988763 778999988643210 11233567889999999998875 6666654332
Q ss_pred c----eEEEEEEeccC-CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCc
Q 001783 662 E----NLYLVMEYLNG-GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1013)
Q Consensus 662 ~----~LyLVMEy~~G-GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1013)
. ..++|||+++| .+|.+++.. +.+++.. +.||+.+|.+||++||+||||||+|||++.++.++|+|||.+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 2 23599999997 689988865 4566543 568999999999999999999999999999999999999998
Q ss_pred cc
Q 001783 737 KV 738 (1013)
Q Consensus 737 k~ 738 (1013)
..
T Consensus 190 ~~ 191 (239)
T PRK01723 190 EL 191 (239)
T ss_pred cc
Confidence 74
No 435
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.57 E-value=1.4e-14 Score=168.44 Aligned_cols=197 Identities=27% Similarity=0.382 Sum_probs=150.9
Q ss_pred HHhcCCCCeeEEEeeeeccceEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-eecccCCCce
Q 001783 643 LISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRV-VHRDLKPDNL 720 (1013)
Q Consensus 643 L~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~ALeYLHs~GI-IHRDIKPeNI 720 (1013)
|+.+.|.|+.++++.+.+...+++|.+||..|+|.+.+... ..++.-....++++|+.||+|||...| .|+.+++.|.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 35678999999999999999999999999999999999874 457888888899999999999998766 9999999999
Q ss_pred eecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCC----
Q 001783 721 LIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG---- 796 (1013)
Q Consensus 721 LLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~---- 796 (1013)
+++....+||+|||+...... +.. .... ....-...|.|||.+.+..
T Consensus 81 lvd~~w~lklt~~Gl~~~~~~--~~~--------------~~~~-------------~~~~~~~lw~aPellr~~~~~~~ 131 (484)
T KOG1023|consen 81 LVDSRWVLKLTDFGLNSLLEE--TAE--------------PEAH-------------HPIRKALLWTAPELLRGALSQSL 131 (484)
T ss_pred eeeeeEEEEechhhhcccccc--ccc--------------cccc-------------chhHHHHhccCHHHhcccccccc
Confidence 999999999999999764110 000 0000 0001223589999998742
Q ss_pred ---CCccceeechhHHHHHHHhCCCCCCCC----ChhHHHHhhhc-cCC-CCCCCC--CCCCHHHHHHHHHhccCCcCCc
Q 001783 797 ---HGTTADWWSVGIILFELIVGIPPFNAE----HPQQIFDNILN-RKI-PWPRVP--EEMSPEAHDLIDRFLTEDPHQR 865 (1013)
Q Consensus 797 ---ys~ksDIWSLGVILYELLTGk~PF~g~----~~~ei~qkIl~-~~~-~~p~lp--~~lS~elkDLI~rMLqkDPekR 865 (1013)
.+.+.|+||+|+++||+++...||... .+.++...+.+ ... ..|.++ ..+.+++..++..||..+|.+|
T Consensus 132 ~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~r 211 (484)
T KOG1023|consen 132 ESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKR 211 (484)
T ss_pred cccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhC
Confidence 356789999999999999999999752 23455555554 221 223222 1456689999999999999999
Q ss_pred CCC
Q 001783 866 LGS 868 (1013)
Q Consensus 866 Pg~ 868 (1013)
|+.
T Consensus 212 Ps~ 214 (484)
T KOG1023|consen 212 PSI 214 (484)
T ss_pred ccH
Confidence 943
No 436
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.43 E-value=7.9e-14 Score=162.80 Aligned_cols=260 Identities=24% Similarity=0.249 Sum_probs=193.7
Q ss_pred CcEEEEEeec--cCceEEEEEEE--CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceE
Q 001783 590 DFEIIKPISR--GAFGRVFLAKK--RTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 590 dYeIlk~LGk--G~FGtVyLArd--k~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~L 664 (1013)
.+.+.+.+|. |.+|.||.+.. ..++..+|+|.-+... .....-.+=++|....+.+ .|++.++.+..++..+.+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~-s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPF-SPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCC-CCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 3777788999 99999999998 8899999999743321 1111112334555555555 489999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCC-CCHHHHHHHHHHHHH----HHHHHHhCCeeecccCCCceeecCC-CcEEEeecCCccc
Q 001783 665 YLVMEYLNGGDLYSLLRNLGC-LDEDVARVYIAEVVL----ALEYLHSLRVVHRDLKPDNLLIAHD-GHIKLTDFGLSKV 738 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~-LsE~~ar~Ia~QIL~----ALeYLHs~GIIHRDIKPeNILLd~d-G~VKLiDFGLAk~ 738 (1013)
|+-+|+|. .+|..+...... +++..++.++.+... ||.++|..+++|-|+||.||++..+ ...+++|||+...
T Consensus 194 fiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~ 272 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSK 272 (524)
T ss_pred eeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEE
Confidence 99999995 688888877654 899999999999999 9999999999999999999999999 8899999998763
Q ss_pred cccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCC
Q 001783 739 GLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIP 818 (1013)
Q Consensus 739 ~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~ 818 (1013)
.-... .. ..........|...|++||++.+. ++...|||+||.++.+..+|..
T Consensus 273 i~~~~---~~-----------------------~~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~ 325 (524)
T KOG0601|consen 273 ISDGN---FS-----------------------SVFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSH 325 (524)
T ss_pred ccCCc---cc-----------------------cceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhcc
Confidence 10000 00 000111223577889999998765 7899999999999999998876
Q ss_pred CCCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCCC
Q 001783 819 PFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 819 PF~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~I 883 (1013)
++..... ..+..+-+...+ .++....+..+...+..|+..+|..|+ +++.+++|++....
T Consensus 326 ~~~~g~~-~~W~~~r~~~ip-~e~~~~~s~~l~~~~~~~~d~~~~~~~---~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 326 LPSVGKN-SSWSQLRQGYIP-LEFCEGGSSSLRSVTSQMLDEDPRLRL---TAQILTALNVIHSK 385 (524)
T ss_pred cccCCCC-CCccccccccCc-hhhhcCcchhhhhHHHHhcCcchhhhh---HHHHHhccccccch
Confidence 6543311 011122111111 233445677788899999999999999 99999999999853
No 437
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.39 E-value=2.7e-13 Score=160.51 Aligned_cols=144 Identities=23% Similarity=0.358 Sum_probs=97.9
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc-------------------------------cHHHHHH
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI-------------------------------RKNAVES 635 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~-------------------------------~~e~ie~ 635 (1013)
.+.+|+. +.||.|++|.||.|+.+.+|+.||||+.++.... -.+..+.
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3566777 8999999999999999888999999999753100 0012233
Q ss_pred HHHHHHHHHhc----------CCCCeeEEEeeeec-cceEEEEEEeccCCChHHH--HHhcC----CCCHHHHHHHHHHH
Q 001783 636 ILAERDILISV----------RNPFVVRFFYSFTC-RENLYLVMEYLNGGDLYSL--LRNLG----CLDEDVARVYIAEV 698 (1013)
Q Consensus 636 ~l~Ei~IL~~L----------~HPNIVkL~e~fed-~~~LyLVMEy~~GGSL~dl--L~~~g----~LsE~~ar~Ia~QI 698 (1013)
+.+|++++... .+...+.+-.+|.+ ....+|||||+.|+.|.++ +...+ .+.+..+..++.|+
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi 276 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV 276 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 34444443322 12222222222222 2346799999999999874 33333 25555566666665
Q ss_pred HHHHHHHHhCCeeecccCCCceeecCCC----cEEEeecCCccc
Q 001783 699 VLALEYLHSLRVVHRDLKPDNLLIAHDG----HIKLTDFGLSKV 738 (1013)
Q Consensus 699 L~ALeYLHs~GIIHRDIKPeNILLd~dG----~VKLiDFGLAk~ 738 (1013)
+ ..|++|+|+||.||+++.+| .++++|||++..
T Consensus 277 f-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~ 313 (537)
T PRK04750 277 F-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGS 313 (537)
T ss_pred H-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEE
Confidence 5 59999999999999999888 999999999763
No 438
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.33 E-value=6.5e-12 Score=145.79 Aligned_cols=138 Identities=23% Similarity=0.329 Sum_probs=94.9
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeecccccc-------------------------------HHHHH------HHH
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIR-------------------------------KNAVE------SIL 637 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~-------------------------------~e~ie------~~l 637 (1013)
+.||.|++|.||+|+.+ +|+.||||+.+...... .+... .+.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 67999999999999974 78999999986431000 00001 233
Q ss_pred HHHHHHHhc----C-CCC--eeEEEeeeeccceEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHHhC
Q 001783 638 AERDILISV----R-NPF--VVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVL-ALEYLHSL 708 (1013)
Q Consensus 638 ~Ei~IL~~L----~-HPN--IVkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~-g~LsE~~ar~Ia~QIL~-ALeYLHs~ 708 (1013)
+|...+.++ . +++ |++++..+ ....+|||||++|++|.++.... ..++ ...++.+++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDR--TSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhh--cCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhC
Confidence 455444444 2 333 23333322 33468999999999998876432 1222 2345555555 47889999
Q ss_pred CeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 709 RVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 709 GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
|++|+|+||.||+++.+|.++|+|||++..
T Consensus 277 g~~H~D~hPgNilv~~~g~i~liDfG~~~~ 306 (437)
T TIGR01982 277 GFFHADLHPGNIFVLKDGKIIALDFGIVGR 306 (437)
T ss_pred CceeCCCCcccEEECCCCcEEEEeCCCeeE
Confidence 999999999999999999999999999863
No 439
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.32 E-value=5.3e-12 Score=124.70 Aligned_cols=128 Identities=19% Similarity=0.306 Sum_probs=96.0
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCC-eeEEEeeeeccceEEEEEEecc
Q 001783 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPF-VVRFFYSFTCRENLYLVMEYLN 672 (1013)
Q Consensus 594 lk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPN-IVkL~e~fed~~~LyLVMEy~~ 672 (1013)
++.|+.|.++.||+++.. +..|++|+...... ....+.+|..++..+.+.+ +++++.... ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 467899999999999864 77899999754321 1123567888888876544 345555433 33589999999
Q ss_pred CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe-----eecccCCCceeecCCCcEEEeecCCccc
Q 001783 673 GGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRV-----VHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 673 GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GI-----IHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
|.++... ......++.+++.+|..||..++ +|+|++|.||+++ ++.++++|||.+..
T Consensus 75 G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 9887643 11123457799999999999885 9999999999999 67899999999874
No 440
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.30 E-value=2.3e-12 Score=150.76 Aligned_cols=250 Identities=26% Similarity=0.274 Sum_probs=188.1
Q ss_pred ccCCcEEEEEeeccCceEEEEEEEC-CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCCeeEEEeeeeccceE
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKR-TTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk-~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L-~HPNIVkL~e~fed~~~L 664 (1013)
...+|..+..||.|.|+.|+.+... .++..|++|.+.+........ ..-+.|+.+...+ .|.+++.++..|....+.
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~d-i~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASD-IFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhh-hcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 3567999999999999999988766 788899999887654322222 2334566666555 588999999999888899
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC-CcEEEeecCCccccccCC
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD-GHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d-G~VKLiDFGLAk~~~~~s 743 (1013)
|+-.|||.++++...+.-...+++...+....|++.++.++|++.++|+|+||+||++..+ +..++.|||.++....
T Consensus 342 ~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~-- 419 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF-- 419 (524)
T ss_pred cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccce--
Confidence 9999999999988877655678999999999999999999999999999999999999886 7788999998751000
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCC--CchhhccCCCCccceeechhHHHHHHHhCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYL--APEILLGTGHGTTADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~Ym--APEVL~g~~ys~ksDIWSLGVILYELLTGk~PF~ 821 (1013)
......++-+++ +|+.+....+..+.|++|||..+++.++|.+.-.
T Consensus 420 --------------------------------~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~ 467 (524)
T KOG0601|consen 420 --------------------------------SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE 467 (524)
T ss_pred --------------------------------ecccccccccccccchhhccccccccccccccccccccccccCcccCc
Confidence 001122333444 4555556778999999999999999999875322
Q ss_pred CCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCC
Q 001783 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFF 880 (1013)
... ....|..+.. +..+ ..+.++..+...++..++..|+ .+.++..|.=|
T Consensus 468 ~~~---~~~~i~~~~~--p~~~-~~~~~~q~~~kv~~~~~~~~~~---l~~~l~~~~~~ 517 (524)
T KOG0601|consen 468 SGV---QSLTIRSGDT--PNLP-GLKLQLQVLLKVMINPDRKRRP---SAVELSLHSEF 517 (524)
T ss_pred ccc---cceeeecccc--cCCC-chHHhhhhhhhhhcCCccccch---hhhhhcccchh
Confidence 211 1223333332 3333 3348899999999999999999 88888887655
No 441
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.26 E-value=5e-11 Score=125.17 Aligned_cols=138 Identities=22% Similarity=0.179 Sum_probs=101.5
Q ss_pred EEeeccCceEEEEEEECC------CCCEEEEEEeeccccc-------------------cHHHHHHH----HHHHHHHHh
Q 001783 595 KPISRGAFGRVFLAKKRT------TGDLFAIKVLKKADMI-------------------RKNAVESI----LAERDILIS 645 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~------tgk~VALKVlkk~~~~-------------------~~e~ie~~----l~Ei~IL~~ 645 (1013)
..||.|--+.||.|.... .+..+|||+++..... .......+ .+|...|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998643 3579999998642100 01112233 379999988
Q ss_pred cCC--CCeeEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCeeecccCCCceee
Q 001783 646 VRN--PFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYL-HSLRVVHRDLKPDNLLI 722 (1013)
Q Consensus 646 L~H--PNIVkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYL-Hs~GIIHRDIKPeNILL 722 (1013)
+.. -++++++.+ ..-+|||||+.+..+..-.-+...+++..+..++.+++.+|..| |+.||||+||+|.|||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~ 158 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW 158 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 853 456666654 45689999997754533222333466667778889999999999 89999999999999999
Q ss_pred cCCCcEEEeecCCcc
Q 001783 723 AHDGHIKLTDFGLSK 737 (1013)
Q Consensus 723 d~dG~VKLiDFGLAk 737 (1013)
. ++.+.|+|||.|.
T Consensus 159 ~-~~~v~iIDF~qav 172 (197)
T cd05146 159 H-DGKVWFIDVSQSV 172 (197)
T ss_pred E-CCcEEEEECCCce
Confidence 7 5789999999886
No 442
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.25 E-value=6.9e-11 Score=140.03 Aligned_cols=169 Identities=22% Similarity=0.357 Sum_probs=130.7
Q ss_pred EEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCCChHHHHHhcCCC
Q 001783 607 LAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCL 686 (1013)
Q Consensus 607 LArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g~L 686 (1013)
.|..+.++.+|.+.+++...- ...+.+.+-+.-|+.++||||+++++.++..+++|||+|.+. .|..++.+.+
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~-- 102 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG-- 102 (690)
T ss_pred ccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH--
Confidence 456678899999998876542 345567777888999999999999999999999999999984 6778887644
Q ss_pred CHHHHHHHHHHHHHHHHHHH-hCCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccc
Q 001783 687 DEDVARVYIAEVVLALEYLH-SLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQL 765 (1013)
Q Consensus 687 sE~~ar~Ia~QIL~ALeYLH-s~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~l 765 (1013)
...+...+.||+.||.||| +.+++|++|.-..|+++..|+.||.+|-++.... +..
T Consensus 103 -~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~-------------~~~--------- 159 (690)
T KOG1243|consen 103 -KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKAS-------------GFN--------- 159 (690)
T ss_pred -HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccc-------------cCC---------
Confidence 7788889999999999997 7889999999999999999999999998875210 000
Q ss_pred chhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhC
Q 001783 766 TASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVG 816 (1013)
Q Consensus 766 t~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG 816 (1013)
. ......---.|..|+.+.... -..|.|-|||+++|++.|
T Consensus 160 -~--------~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 160 -A--------PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred -c--------ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence 0 000011112366676654333 467999999999999998
No 443
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.12 E-value=3.5e-10 Score=115.66 Aligned_cols=141 Identities=18% Similarity=0.246 Sum_probs=107.1
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC--CCeeEEEeeeecc---ceEEEEE
Q 001783 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN--PFVVRFFYSFTCR---ENLYLVM 668 (1013)
Q Consensus 594 lk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~H--PNIVkL~e~fed~---~~LyLVM 668 (1013)
++.||.|.++.||++... +|+.|++|+....... .....+.+|..++..+.+ ..+++++.+.... +..|+||
T Consensus 3 ~~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~ 79 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM 79 (223)
T ss_pred ceecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence 367899999999999874 3678999997654321 123567889999998875 3457777666554 3678999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-----------------------------------------
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS----------------------------------------- 707 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs----------------------------------------- 707 (1013)
||++|.+|...+.. ..+++.....++.+++.+|.+||+
T Consensus 80 e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 80 ERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred EEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 99999888765532 356777777777788888888873
Q ss_pred ---------------CCeeecccCCCceeecC--CCcEEEeecCCccc
Q 001783 708 ---------------LRVVHRDLKPDNLLIAH--DGHIKLTDFGLSKV 738 (1013)
Q Consensus 708 ---------------~GIIHRDIKPeNILLd~--dG~VKLiDFGLAk~ 738 (1013)
..++|+|++|.|||++. ++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 24699999999999998 66789999998874
No 444
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.10 E-value=1.6e-10 Score=127.68 Aligned_cols=215 Identities=23% Similarity=0.339 Sum_probs=152.3
Q ss_pred HHHHHHhcCCCCeeEEEeeeeccc-----eEEEEEEeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001783 639 ERDILISVRNPFVVRFFYSFTCRE-----NLYLVMEYLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSLR 709 (1013)
Q Consensus 639 Ei~IL~~L~HPNIVkL~e~fed~~-----~LyLVMEy~~GGSL~dlL~~~----g~LsE~~ar~Ia~QIL~ALeYLHs~G 709 (1013)
-.+-|..+.|.|||+++.++.+.. ...++.|||..|+|.++|++. ..+.....++|+-||+.||.|||+..
T Consensus 117 vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~ 196 (458)
T KOG1266|consen 117 VFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC
Confidence 344455667999999998887654 488999999999999999754 35788888999999999999999875
Q ss_pred --eeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCC
Q 001783 710 --VVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYL 787 (1013)
Q Consensus 710 --IIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~Ym 787 (1013)
|+|+++.-+-|++..+|-||+.--.... ++. .+ . . .....+..-.|-++|.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s------~h~----s~-------------~---~-~~~~Ek~~~~~~~g~~ 249 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDS------THP----SV-------------N---S-TREAEKSVNTSLPGFS 249 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccc------cch----hh-------------h---h-hhHhhhhccccCCccc
Confidence 9999999999999999988874221111 100 00 0 0 0011122335678899
Q ss_pred CchhhccCCCCccceeechhHHHHHHHhCCCC-CCCCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcC
Q 001783 788 APEILLGTGHGTTADWWSVGIILFELIVGIPP-FNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRL 866 (1013)
Q Consensus 788 APEVL~g~~ys~ksDIWSLGVILYELLTGk~P-F~g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRP 866 (1013)
|||.=.....+.++|||++|....||..|..- -.+.+....-..|.+.-.. + -..--+++|++||+..|..||
T Consensus 250 a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~---l---en~lqr~~i~kcl~~eP~~rp 323 (458)
T KOG1266|consen 250 APESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIG---L---ENGLQRGSITKCLEGEPNGRP 323 (458)
T ss_pred cCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheee---c---cCccccCcCcccccCCCCCCc
Confidence 99976666677899999999999999987643 3333332222223221111 0 112235789999999999999
Q ss_pred CCCCHHHHHhCCCCCCCChhhHh
Q 001783 867 GSGGASEVKQHVFFKDINWDTLA 889 (1013)
Q Consensus 867 g~~TAeELLqHPFFk~Idw~~L~ 889 (1013)
++.+++.||.+-++.-..+.
T Consensus 324 ---~ar~llfHpllfeVhslkll 343 (458)
T KOG1266|consen 324 ---DARLLLFHPLLFEVHSLKLL 343 (458)
T ss_pred ---chhhhhcCceeeecchHHHH
Confidence 99999999998877655443
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.04 E-value=1.3e-09 Score=113.56 Aligned_cols=134 Identities=26% Similarity=0.269 Sum_probs=100.1
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeec-----cccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEE
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKK-----ADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk-----~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVME 669 (1013)
..+++|+-+.++.+... |..+.+|.=.+ +.+...-..++..+|..+|..+.--.|..-.-++.+.....|+||
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 35789999999999663 44566665322 222233345678889999988865554444444566677789999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
|++|-.|.+.+... . -.++..+-.-+.-||..||||+||.++||++...+ +.++||||+.+
T Consensus 80 ~I~G~~lkd~l~~~---~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA---R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc---c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999999888764 1 34566677777889999999999999999997765 99999999984
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.89 E-value=1.7e-08 Score=105.21 Aligned_cols=144 Identities=22% Similarity=0.250 Sum_probs=106.9
Q ss_pred EEEEeeccCceEEEEEEECCCCCEEEEEEe-----eccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEE
Q 001783 593 IIKPISRGAFGRVFLAKKRTTGDLFAIKVL-----KKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 593 Ilk~LGkG~FGtVyLArdk~tgk~VALKVl-----kk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLV 667 (1013)
.+..|-+|+-+.|+.+.. .|+.+.||.= ..+.+...-...+..+|.++|.++.--.|.--.-+|.+...-+|+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 567889999999999976 4777777753 223333344457888999999887644443333346666677899
Q ss_pred EEeccC-CChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCC---cEEEeecCCccc
Q 001783 668 MEYLNG-GDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG---HIKLTDFGLSKV 738 (1013)
Q Consensus 668 MEy~~G-GSL~dlL~~~g--~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG---~VKLiDFGLAk~ 738 (1013)
|||++| -++.+++.... .........++..|-..|.-||.++|||+||..+||++..+| .+.|+|||++..
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 999987 47888886542 233333467888999999999999999999999999997765 358999999863
No 447
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.76 E-value=4.3e-08 Score=102.48 Aligned_cols=126 Identities=24% Similarity=0.280 Sum_probs=83.3
Q ss_pred EEEEEEECCCCCEEEEEEeecccc-----------------------ccHHHHHHHHHHHHHHHhcCCC--CeeEEEeee
Q 001783 604 RVFLAKKRTTGDLFAIKVLKKADM-----------------------IRKNAVESILAERDILISVRNP--FVVRFFYSF 658 (1013)
Q Consensus 604 tVyLArdk~tgk~VALKVlkk~~~-----------------------~~~e~ie~~l~Ei~IL~~L~HP--NIVkL~e~f 658 (1013)
.||.|.. ..|..+|+|+.+.... ..........+|.+.|..+..- ++++++.+.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888887 4677999999864210 0111235677899999999765 566776442
Q ss_pred eccceEEEEEEecc--CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHhCCeeecccCCCceeecCCCcEEEeecCC
Q 001783 659 TCRENLYLVMEYLN--GGDLYSLLRNLGCLDEDVARVYIAEVVLALEY-LHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1013)
Q Consensus 659 ed~~~LyLVMEy~~--GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeY-LHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1013)
.-+|||||+. |..+..+.... ++......++.+++..+.. +|+.||||+||.+.|||++.+ .+.|+|||.
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~q 152 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQ 152 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTT
T ss_pred ----CCEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCc
Confidence 3479999998 65554433321 2244566777788885555 579999999999999999887 999999998
Q ss_pred cc
Q 001783 736 SK 737 (1013)
Q Consensus 736 Ak 737 (1013)
+.
T Consensus 153 av 154 (188)
T PF01163_consen 153 AV 154 (188)
T ss_dssp EE
T ss_pred ce
Confidence 87
No 448
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.71 E-value=2.2e-07 Score=101.98 Aligned_cols=131 Identities=15% Similarity=0.101 Sum_probs=92.1
Q ss_pred EEEEEECCCCCEEEEEEeecccccc---H-----HHHHHHHHHHHHHHhcCCCCe--eEEEeeeec-----cceEEEEEE
Q 001783 605 VFLAKKRTTGDLFAIKVLKKADMIR---K-----NAVESILAERDILISVRNPFV--VRFFYSFTC-----RENLYLVME 669 (1013)
Q Consensus 605 VyLArdk~tgk~VALKVlkk~~~~~---~-----e~ie~~l~Ei~IL~~L~HPNI--VkL~e~fed-----~~~LyLVME 669 (1013)
|+.+.. .|+.|.||......... . .....+.+|...+..+..-+| +.+..+++. ...-+||||
T Consensus 38 vvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 38 TLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred EEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 444443 46678888664322110 0 011246788888877743332 333334432 235789999
Q ss_pred eccCC-ChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecC-------CCcEEEeecCCcc
Q 001783 670 YLNGG-DLYSLLRN--LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-------DGHIKLTDFGLSK 737 (1013)
Q Consensus 670 y~~GG-SL~dlL~~--~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-------dG~VKLiDFGLAk 737 (1013)
++++- +|.+++.. ....+......++.+++..+.-||..||+|+|+++.|||++. ++.+.|+||+.+.
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 99885 89998864 244667788899999999999999999999999999999975 4679999999875
No 449
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.70 E-value=1.4e-08 Score=121.14 Aligned_cols=168 Identities=23% Similarity=0.354 Sum_probs=120.7
Q ss_pred HHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhh
Q 001783 697 EVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERR 775 (1013)
Q Consensus 697 QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~ 775 (1013)
+++.||.|+|. .++||++|.|++|.++.+|..||+.|+.+..... .++ .+ .. ...+.++
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~-~~~---~p----~~---~yd~~lp--------- 166 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANG-PTE---YP----FS---EYDPPLP--------- 166 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCC-CCc---cc----cc---cCCCCCC---------
Confidence 45599999995 5899999999999999999999999998763111 010 00 00 0111111
Q ss_pred ccccccCCCCCCCchhhccCCCCccceeechhHHHHHHH-hCCCCCCCCChhHHHHhhhc-cCCCCCCCCCCCCHHHHHH
Q 001783 776 KKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELI-VGIPPFNAEHPQQIFDNILN-RKIPWPRVPEEMSPEAHDL 853 (1013)
Q Consensus 776 ~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELL-TGk~PF~g~~~~ei~qkIl~-~~~~~p~lp~~lS~elkDL 853 (1013)
....-...|.|||++.+...+.++|++||||++|.+. .|+.-|.+......+..-.. ...........+++++++=
T Consensus 167 --~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~ 244 (700)
T KOG2137|consen 167 --LLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRES 244 (700)
T ss_pred --hhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHH
Confidence 1123456799999999988899999999999999999 67777765543332222211 1111223456789999999
Q ss_pred HHHhccCCcCCcCCCCCHHHHHhCCCCCCCChhhHh
Q 001783 854 IDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLA 889 (1013)
Q Consensus 854 I~rMLqkDPekRPg~~TAeELLqHPFFk~Idw~~L~ 889 (1013)
|.++|..++..|| ++..++.-|||.+..-..|.
T Consensus 245 l~k~l~~~~~~rp---~~~~l~~~~ff~D~~~~aLr 277 (700)
T KOG2137|consen 245 LKKLLNGDSAVRP---TLDLLLSIPFFSDPGLKALR 277 (700)
T ss_pred HHHHhcCCcccCc---chhhhhcccccCCchhhhhh
Confidence 9999999999999 99999999999986555543
No 450
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.63 E-value=4.2e-07 Score=106.05 Aligned_cols=211 Identities=18% Similarity=0.226 Sum_probs=153.1
Q ss_pred ceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc----ceEEEEEEeccC-CCh
Q 001783 602 FGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR----ENLYLVMEYLNG-GDL 676 (1013)
Q Consensus 602 FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~----~~LyLVMEy~~G-GSL 676 (1013)
-.+.|+|....+|..|++|.+...+.... .....-+++++++.|+|||++.++|.+. ..++||++|.++ ++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 35899999999999999999854332211 2234557789999999999999999853 358999999986 577
Q ss_pred HHHHHh---------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcccccc
Q 001783 677 YSLLRN---------------LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 677 ~dlL~~---------------~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1013)
.++.-. ....+|..+|.|+.||..||.++|+.|+.-+-|.|.+||++.+-.|+|+.-|..-+...
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 776521 12368999999999999999999999999999999999999988888877665432110
Q ss_pred CCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCC-C
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPP-F 820 (1013)
Q Consensus 742 ~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTGk~P-F 820 (1013)
+. . |-+.+. .+-|.=.||.++..|.||..- +
T Consensus 446 d~-------------------------------------------~--~~le~~---Qq~D~~~lG~ll~aLAt~~~ns~ 477 (655)
T KOG3741|consen 446 DP-------------------------------------------T--EPLESQ---QQNDLRDLGLLLLALATGTENSN 477 (655)
T ss_pred CC-------------------------------------------C--cchhHH---hhhhHHHHHHHHHHHhhcccccc
Confidence 00 0 111111 345777899999999999532 2
Q ss_pred CCCChhHH-HHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhC
Q 001783 821 NAEHPQQI-FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 821 ~g~~~~ei-~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqH 877 (1013)
.....++. ... +....+.+++++|.-+...++.++ ++.+++.|
T Consensus 478 ~~d~~~~s~~~~----------I~~~yS~D~rn~v~yl~s~~~~~k----sI~~llp~ 521 (655)
T KOG3741|consen 478 RTDSTQSSHLTR----------ITTTYSTDLRNVVEYLESLNFREK----SIQDLLPM 521 (655)
T ss_pred cccchHHHHHHH----------hhhhhhHHHHHHHHHHHhcCcccc----cHHHHHHH
Confidence 22222222 111 234578899999999999888863 68888877
No 451
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.57 E-value=8.1e-09 Score=122.10 Aligned_cols=256 Identities=23% Similarity=0.260 Sum_probs=176.6
Q ss_pred CCCCCCCCCCCcccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCC-eeE
Q 001783 575 RTSPIHPSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPF-VVR 653 (1013)
Q Consensus 575 ~~sp~~P~k~~~~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPN-IVk 653 (1013)
..+.|.|.+.......|....-+++|+++++++.+...+...+ .+++... ....-++++|.+++||| .+.
T Consensus 228 TkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--------l~~rl~~eLLdK~n~P~~~v~ 298 (829)
T KOG0576|consen 228 TKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--------LSRRLAIELLDKVNNPNPVVR 298 (829)
T ss_pred hccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--------hhhHHHHHHHHHccCCCCccc
Confidence 4566667776767777888888999999999999876655544 6665432 34556889999999999 777
Q ss_pred EEeeeeccceEEEEEEeccCC-ChHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEe
Q 001783 654 FFYSFTCRENLYLVMEYLNGG-DLYSLL-RNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLT 731 (1013)
Q Consensus 654 L~e~fed~~~LyLVMEy~~GG-SL~dlL-~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLi 731 (1013)
.++.++.+.+..++|+++.++ +....+ ...-.+.+-+...+.+.-+.+|+|||+.-=+||| |||..+ +..++.
T Consensus 299 ~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~ 373 (829)
T KOG0576|consen 299 YLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLL 373 (829)
T ss_pred ccccCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccc
Confidence 788888888999999999887 222111 1111233444455666777899999998778998 777655 678999
Q ss_pred ecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHH
Q 001783 732 DFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILF 811 (1013)
Q Consensus 732 DFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILY 811 (1013)
||+.... ++ .....++..+|+.++|||+.....+....|.|++|+--.
T Consensus 374 ~~~v~~~--------------------------L~------~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~ 421 (829)
T KOG0576|consen 374 DFAVPPQ--------------------------LT------RTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAI 421 (829)
T ss_pred cccCCcc--------------------------cC------cccccccCCCCCCCCCchhhcccccccCCCccCCCcchh
Confidence 9997642 00 001356789999999999999999999999999999877
Q ss_pred HHHhCCCCCCCCChhHHHHhhhccCCCCCCCC--CCCCHHHH-HHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 812 ELIVGIPPFNAEHPQQIFDNILNRKIPWPRVP--EEMSPEAH-DLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 812 ELLTGk~PF~g~~~~ei~qkIl~~~~~~p~lp--~~lS~elk-DLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
+|--|.+|-... ......+-... ..+.+. ...++... ++...|+..-|..|+ .+..++.|.+|.+
T Consensus 422 ~~ap~~pPr~~P--~~~~~~~g~~p-~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pk---v~mgacfsKvfng 489 (829)
T KOG0576|consen 422 QMAPGLPPRSSP--PAVLPMIGNGP-NSPMLTDKSAWSPVFHRDFPAPCLNGLPPTPK---VHMGACFSKVFNG 489 (829)
T ss_pred hcCCCCCCCCCC--ccccCCCCCCC-CccccchhhhcCcccccCCcccccCCCCCCCc---chhhHHHHHHhcc
Confidence 888787775431 11111111111 001110 01111122 467788888888888 8888899988875
No 452
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.52 E-value=5e-07 Score=94.82 Aligned_cols=105 Identities=26% Similarity=0.296 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHhcCCCC--eeEEEeeeecc----ceEEEEEEeccCC-ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001783 634 ESILAERDILISVRNPF--VVRFFYSFTCR----ENLYLVMEYLNGG-DLYSLLRNLGCLDEDVARVYIAEVVLALEYLH 706 (1013)
Q Consensus 634 e~~l~Ei~IL~~L~HPN--IVkL~e~fed~----~~LyLVMEy~~GG-SL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLH 706 (1013)
....+|...+..+..-. +++.+.+.+.. ...|||+|+++|- +|.+++.....++......++.+++..+.-||
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence 46677888777664332 34444444432 2468999999984 89999987655788888999999999999999
Q ss_pred hCCeeecccCCCceeecCCC---cEEEeecCCccc
Q 001783 707 SLRVVHRDLKPDNLLIAHDG---HIKLTDFGLSKV 738 (1013)
Q Consensus 707 s~GIIHRDIKPeNILLd~dG---~VKLiDFGLAk~ 738 (1013)
..||+|+|++|.|||++.++ .+.|+||+-++.
T Consensus 136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999999999999999887 899999998774
No 453
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.37 E-value=1e-06 Score=96.77 Aligned_cols=137 Identities=23% Similarity=0.258 Sum_probs=101.2
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc-------c------------HHHHHHHHHHHHHHHhcCCC--
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI-------R------------KNAVESILAERDILISVRNP-- 649 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~-------~------------~e~ie~~l~Ei~IL~~L~HP-- 649 (1013)
+.+...||-|--|.||.|.+. .|..+|||.-+..... . .-......+|.++|..+...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 455678999999999999985 7889999975421100 0 01123567888899888654
Q ss_pred CeeEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEE
Q 001783 650 FVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIK 729 (1013)
Q Consensus 650 NIVkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VK 729 (1013)
.|++.++ .+...+||||++|-.|...- ++.+.+..++..|+.-+.-+-..||||+|+.+-|||++.+|.+.
T Consensus 172 ~VP~P~~----~nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~ 242 (304)
T COG0478 172 KVPKPIA----WNRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIV 242 (304)
T ss_pred CCCCccc----cccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEE
Confidence 5665543 35678999999996665332 23455566677777777777799999999999999999999999
Q ss_pred EeecCCcc
Q 001783 730 LTDFGLSK 737 (1013)
Q Consensus 730 LiDFGLAk 737 (1013)
++||--+.
T Consensus 243 vIDwPQ~v 250 (304)
T COG0478 243 VIDWPQAV 250 (304)
T ss_pred EEeCcccc
Confidence 99998665
No 454
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.31 E-value=1e-05 Score=82.87 Aligned_cols=138 Identities=27% Similarity=0.377 Sum_probs=82.9
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC--CeeEEEeeeec---cceEEEEE
Q 001783 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNP--FVVRFFYSFTC---RENLYLVM 668 (1013)
Q Consensus 594 lk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HP--NIVkL~e~fed---~~~LyLVM 668 (1013)
++.|+.|..+.||++.... ..+++|+.... .....+.+|..++..+... .+++++..... ....+++|
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~ 74 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM 74 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH-----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence 5789999999999998854 58999986543 3446677888888777432 35566653322 23579999
Q ss_pred EeccCCChHH----------------HHH---hc--C--CCCHHH------HHHH---------------HHHHHH-HHH
Q 001783 669 EYLNGGDLYS----------------LLR---NL--G--CLDEDV------ARVY---------------IAEVVL-ALE 703 (1013)
Q Consensus 669 Ey~~GGSL~d----------------lL~---~~--g--~LsE~~------ar~I---------------a~QIL~-ALe 703 (1013)
++++|..+.. .+. .. . .+.... .... +..+.. .++
T Consensus 75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (239)
T PF01636_consen 75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQ 154 (239)
T ss_dssp EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred EEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHH
Confidence 9999987777 111 11 0 011000 0000 111222 233
Q ss_pred HHH-------hCCeeecccCCCceeec-CCCcEEEeecCCccc
Q 001783 704 YLH-------SLRVVHRDLKPDNLLIA-HDGHIKLTDFGLSKV 738 (1013)
Q Consensus 704 YLH-------s~GIIHRDIKPeNILLd-~dG~VKLiDFGLAk~ 738 (1013)
.++ ...++|+|+.|.|||++ .++.+-|+||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 155 ELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 333 24699999999999999 667778999998864
No 455
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.30 E-value=5e-06 Score=95.35 Aligned_cols=230 Identities=16% Similarity=0.269 Sum_probs=147.0
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCCeeE--------EEeeeeccceE
Q 001783 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVR--------FFYSFTCRENL 664 (1013)
Q Consensus 594 lk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~-L~HPNIVk--------L~e~fed~~~L 664 (1013)
.+.||+|+-+.+|-.-.- .-.+-|++.+.-.... ...+..|.. -.||-+-. |++. .....+
T Consensus 16 gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~------aqk~a~la~~p~~p~~~~rvaWPqa~L~G~-~~~~~i 85 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQ------AQKVAELAATPDAPLLNYRVAWPQATLHGG-RRGKVI 85 (637)
T ss_pred CccccCCccceeeecchh---hchhheeecCCCchHH------HHHHHHhccCCCCcchhhhhcccHHHhhCC-Ccccee
Confidence 356999999999955322 2235588876542111 112223333 24553222 1111 112237
Q ss_pred EEEEEeccCCChHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecCCcc
Q 001783 665 YLVMEYLNGGDLYSLLR-------NLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1013)
Q Consensus 665 yLVMEy~~GGSL~dlL~-------~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1013)
.+.|..+.|..--..+. ......+..+...++.|+.+.+.||..|.+-+|+.++|+|+.+++.|.|.|=..-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccccee
Confidence 78899888753222221 12447888999999999999999999999999999999999999999998754322
Q ss_pred ccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHH
Q 001783 738 VGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFE 812 (1013)
Q Consensus 738 ~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~ksDIWSLGVILYE 812 (1013)
+. .........+|.+.|.+||.-. +..-+...|-|.||+++++
T Consensus 166 i~--------------------------------~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~ 213 (637)
T COG4248 166 IN--------------------------------ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFH 213 (637)
T ss_pred ec--------------------------------cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHH
Confidence 10 0011233468999999999754 3445778999999999999
Q ss_pred HHhC-CCCCCCC-------ChhHHHHhhhccC-----------CCCCCC--CCCCCHHHHHHHHHhccCC--cCCcCC
Q 001783 813 LIVG-IPPFNAE-------HPQQIFDNILNRK-----------IPWPRV--PEEMSPEAHDLIDRFLTED--PHQRLG 867 (1013)
Q Consensus 813 LLTG-k~PF~g~-------~~~ei~qkIl~~~-----------~~~p~l--p~~lS~elkDLI~rMLqkD--PekRPg 867 (1013)
+|.| +.||.+- ++-+ ..|..+. .+-|.- ..-+++.+..|..+|++.- +.-||+
T Consensus 214 lL~ggrHPysGI~~~~~ap~p~E--~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~ 289 (637)
T COG4248 214 LLFGGRHPYSGIPLISDAPNPLE--TDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPT 289 (637)
T ss_pred HHhcCCCCCCcccccCCCCCcch--hhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCC
Confidence 9986 9999753 1211 1222211 111111 1246788999999999843 457994
No 456
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.22 E-value=1.8e-05 Score=85.24 Aligned_cols=138 Identities=22% Similarity=0.339 Sum_probs=89.5
Q ss_pred CCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHH------HHHHHHHHHhcCC---CCeeEEEeeee
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVES------ILAERDILISVRN---PFVVRFFYSFT 659 (1013)
Q Consensus 589 ddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~------~l~Ei~IL~~L~H---PNIVkL~e~fe 659 (1013)
.+|.+++++-......|.+-.- +|+.|++|............... ..+++..+..+.. -....++.+.+
T Consensus 31 ~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 31 NNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred CCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 5699999999888888887764 57889999876533222221111 1223333333322 12222222221
Q ss_pred -----ccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEEEeecC
Q 001783 660 -----CRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFG 734 (1013)
Q Consensus 660 -----d~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFG 734 (1013)
-....+|+|||++|..|.++.. +++. +...|..+|.-||+.|+.|+|..|.|++++.++ ++++||+
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e~----~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iID~~ 179 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIED----IDED----LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IRIIDTQ 179 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchh----cCHH----HHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EEEEECc
Confidence 1234568999999987765532 3332 445677889999999999999999999998654 9999998
Q ss_pred Ccc
Q 001783 735 LSK 737 (1013)
Q Consensus 735 LAk 737 (1013)
..+
T Consensus 180 ~k~ 182 (229)
T PF06176_consen 180 GKR 182 (229)
T ss_pred ccc
Confidence 655
No 457
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.18 E-value=4.7e-06 Score=99.17 Aligned_cols=137 Identities=22% Similarity=0.348 Sum_probs=87.0
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeecccc---------------------------ccH----HHHHHH------H
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM---------------------------IRK----NAVESI------L 637 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~---------------------------~~~----e~ie~~------l 637 (1013)
..|+.++-|.||.|+.+ +|+.|||||....-. .-. +..+.+ .
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 67899999999999985 499999999864210 000 111122 2
Q ss_pred HHHHHHHhc-----CCCC--eeEEEeeeeccceEEEEEEeccCCChHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001783 638 AERDILISV-----RNPF--VVRFFYSFTCRENLYLVMEYLNGGDLYSLL--RNLGCLDEDVARVYIAEVVLALEYLHSL 708 (1013)
Q Consensus 638 ~Ei~IL~~L-----~HPN--IVkL~e~fed~~~LyLVMEy~~GGSL~dlL--~~~g~LsE~~ar~Ia~QIL~ALeYLHs~ 708 (1013)
+|...+.++ +.|+ |+++|.-+ ...-.|+|||++|-.+.+.. +. ..++...+...+.++. +.-+=..
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~--t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f--~~q~~~d 284 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEY--TTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAF--LRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhc--cCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHH--HHHHHhc
Confidence 333333332 1343 33343222 33458999999999888874 44 3455333222222211 2223348
Q ss_pred CeeecccCCCceeecCCCcEEEeecCCcc
Q 001783 709 RVVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1013)
Q Consensus 709 GIIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1013)
|++|.|.+|.||+++.+|.+.+.|||+..
T Consensus 285 gffHaDpHpGNi~v~~~g~i~~lDfGi~g 313 (517)
T COG0661 285 GFFHADPHPGNILVRSDGRIVLLDFGIVG 313 (517)
T ss_pred CccccCCCccceEEecCCcEEEEcCccee
Confidence 99999999999999999999999999865
No 458
>PRK09902 hypothetical protein; Provisional
Probab=98.16 E-value=1.7e-05 Score=84.90 Aligned_cols=139 Identities=15% Similarity=0.208 Sum_probs=100.6
Q ss_pred eccCceEEEEEEECCCCCEEEEEEeecc---ccccHHHHHHHHHHHHHHHhcCCCC--eeEEEeeeec----cceEEEEE
Q 001783 598 SRGAFGRVFLAKKRTTGDLFAIKVLKKA---DMIRKNAVESILAERDILISVRNPF--VVRFFYSFTC----RENLYLVM 668 (1013)
Q Consensus 598 GkG~FGtVyLArdk~tgk~VALKVlkk~---~~~~~e~ie~~l~Ei~IL~~L~HPN--IVkL~e~fed----~~~LyLVM 668 (1013)
|.||-|-|+..... |+.|=+|.-... ..........+.+|...|..+..-+ ++++...-.. ....+||+
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 56888889987653 345777764311 0111234568889999998875322 4444422111 12478999
Q ss_pred EeccC-CChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCc--EEEeecCCccc
Q 001783 669 EYLNG-GDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGH--IKLTDFGLSKV 738 (1013)
Q Consensus 669 Ey~~G-GSL~dlL~~~--g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~--VKLiDFGLAk~ 738 (1013)
|-+.| .+|.+++.+. ...++.....++.+|+.+|.-||..|+.|+|+-+.|||++.+|. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 98864 5898888663 35678888899999999999999999999999999999987777 99999987763
No 459
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.13 E-value=2.3e-05 Score=83.90 Aligned_cols=134 Identities=16% Similarity=0.114 Sum_probs=83.7
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCC--eeEEEeeeeccceEEEEEEecc
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPF--VVRFFYSFTCRENLYLVMEYLN 672 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPN--IVkL~e~fed~~~LyLVMEy~~ 672 (1013)
..||.|..+.||+. .+..+++|+..... ....+.+|.+++..+..-. +++.+.+....+..++|||+++
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecC
Confidence 56899999999974 24457889876422 1234678999998875432 4677777777778899999999
Q ss_pred CCC-hH--------------HHH-------Hhc--CCCCHH-HHHHHHHH----------HHH-HHHHHH----hCCeee
Q 001783 673 GGD-LY--------------SLL-------RNL--GCLDED-VARVYIAE----------VVL-ALEYLH----SLRVVH 712 (1013)
Q Consensus 673 GGS-L~--------------dlL-------~~~--g~LsE~-~ar~Ia~Q----------IL~-ALeYLH----s~GIIH 712 (1013)
|.+ +. ..+ +.. ...+.. ....+-.+ +.. ...+|. ...++|
T Consensus 78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H 157 (226)
T TIGR02172 78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH 157 (226)
T ss_pred CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence 964 11 111 110 001100 00111000 111 122222 234789
Q ss_pred cccCCCceeecCCCcEEEeecCCccc
Q 001783 713 RDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 713 RDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
+|+.|.||+++.++ +.|+||+.+..
T Consensus 158 gD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 158 GDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred cCCCCCcEEEcCCC-cEEEechhcCc
Confidence 99999999999888 99999998864
No 460
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.97 E-value=6.7e-05 Score=81.97 Aligned_cols=137 Identities=25% Similarity=0.224 Sum_probs=92.2
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHH---------------------HHHHHHHHHHHHHhcC--CCCe
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKN---------------------AVESILAERDILISVR--NPFV 651 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e---------------------~ie~~l~Ei~IL~~L~--HPNI 651 (1013)
..|..|--+.||+|.. .++..+|+|+++.....-.. .......|..-|.++. +-.+
T Consensus 54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv 132 (268)
T COG1718 54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV 132 (268)
T ss_pred eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4778888899999986 56889999999753221111 1123345666665553 2233
Q ss_pred eEEEeeeeccceEEEEEEeccCCCh-HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEE
Q 001783 652 VRFFYSFTCRENLYLVMEYLNGGDL-YSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIK 729 (1013)
Q Consensus 652 VkL~e~fed~~~LyLVMEy~~GGSL-~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VK 729 (1013)
++-+.++ +-.|||||+...-+ .-.|.. -.+....+..+..+++..+.-|-. .|+||+||..-|||+. +|.+.
T Consensus 133 P~Pi~~~----~nVLvMEfIg~~g~pAP~LkD-v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~ 206 (268)
T COG1718 133 PEPIAFR----NNVLVMEFIGDDGLPAPRLKD-VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPY 206 (268)
T ss_pred CCceeec----CCeEEEEeccCCCCCCCCccc-CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEE
Confidence 4444332 34799999954311 111111 123334688888899999988887 9999999999999999 88999
Q ss_pred EeecCCccc
Q 001783 730 LTDFGLSKV 738 (1013)
Q Consensus 730 LiDFGLAk~ 738 (1013)
|+|||-|..
T Consensus 207 iID~~QaV~ 215 (268)
T COG1718 207 IIDVSQAVT 215 (268)
T ss_pred EEECccccc
Confidence 999998863
No 461
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.90 E-value=3.5e-05 Score=97.06 Aligned_cols=239 Identities=23% Similarity=0.252 Sum_probs=156.1
Q ss_pred eeccCceEEEEEEECCC----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccce----EEEEE
Q 001783 597 ISRGAFGRVFLAKKRTT----GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN----LYLVM 668 (1013)
Q Consensus 597 LGkG~FGtVyLArdk~t----gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~----LyLVM 668 (1013)
|..-.+|+|++.++... -.++-++.-.-.-...+..+.....|...+..+.|+|++.++.+...... +.+..
T Consensus 186 ls~~~~~~l~l~k~~~~~qs~~~~~~~s~~~~~~~~~k~~i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~ 265 (1351)
T KOG1035|consen 186 LSHLTQGTLLLVKWVEQAQSLSEPIEISHDYESTPCGKKEIQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQ 265 (1351)
T ss_pred eccccCceEEEEehhhhHHhhcCcccccCcccCccchHHHHHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHH
Confidence 56667778887766321 11111111000000112334455567777888999999999887665433 34556
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCC---ceeecCCCcEEEe--ecCCccccccCC
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPD---NLLIAHDGHIKLT--DFGLSKVGLINS 743 (1013)
Q Consensus 669 Ey~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPe---NILLd~dG~VKLi--DFGLAk~~~~~s 743 (1013)
|+|.+.++...+..-+.++...++.+..+++.||.|+|+....|.-+.-. +-..+..+.+.++ ||+.++.....
T Consensus 266 ~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~- 344 (1351)
T KOG1035|consen 266 EICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDN- 344 (1351)
T ss_pred hhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCCc-
Confidence 88999999999999999999999999999999999999985555444433 3334445566666 77766521100
Q ss_pred CCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCcc--ceeechhHHHHHHHhCCCCCC
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTT--ADWWSVGIILFELIVGIPPFN 821 (1013)
Q Consensus 744 ~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~k--sDIWSLGVILYELLTGk~PF~ 821 (1013)
.......-+..+.|||.+....+..+ .|+|.+|.....+..|..+-.
T Consensus 345 -------------------------------~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~ 393 (1351)
T KOG1035|consen 345 -------------------------------EKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISE 393 (1351)
T ss_pred -------------------------------ccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccc
Confidence 01112334556788998887766554 699999999999998764321
Q ss_pred CCChhHHHHhhhccCCCCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCCC
Q 001783 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 822 g~~~~ei~qkIl~~~~~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk~ 882 (1013)
.. .....+ ++........+++.+|+..++++|+ ++.+++.|+|.+.
T Consensus 394 ~~---~~~~~~---------l~~~~~~~~~d~~~~~~~~~~~~Rl---~~~~ll~~~f~~~ 439 (1351)
T KOG1035|consen 394 KS---AVPVSL---------LDVLSTSELLDALPKCLDEDSEERL---SALELLTHPFLRF 439 (1351)
T ss_pred cc---cchhhh---------hccccchhhhhhhhhhcchhhhhcc---chhhhhhchhccc
Confidence 10 011111 1112222678899999999999999 9999999999863
No 462
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.88 E-value=0.00011 Score=77.96 Aligned_cols=135 Identities=17% Similarity=0.134 Sum_probs=82.9
Q ss_pred EeeccCc-eEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCeeEEEeeeeccceEEEEEEeccC
Q 001783 596 PISRGAF-GRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLVMEYLNG 673 (1013)
Q Consensus 596 ~LGkG~F-GtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNIVkL~e~fed~~~LyLVMEy~~G 673 (1013)
.|-.|.+ +.||.+... +..+.+|+..... ...+.+|++++..+. +--+++++.+....+..++|||+++|
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 76 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPG 76 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCC
Confidence 3445555 789988653 3678888875432 234567888887763 34466777777766678999999999
Q ss_pred CChHHHH----------------HhcCCCCH-------H------HHHHHHH----------------HHHHHHHHH---
Q 001783 674 GDLYSLL----------------RNLGCLDE-------D------VARVYIA----------------EVVLALEYL--- 705 (1013)
Q Consensus 674 GSL~dlL----------------~~~g~LsE-------~------~ar~Ia~----------------QIL~ALeYL--- 705 (1013)
.+|.... .+...++. . .....+. .+...+..|
T Consensus 77 ~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (244)
T cd05150 77 VPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEAT 156 (244)
T ss_pred ccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhh
Confidence 7765331 11011110 0 0000000 011112222
Q ss_pred ----HhCCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 706 ----HSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 706 ----Hs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
....++|+|+.|.|||++.++.+.|+||+.|..
T Consensus 157 ~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 157 RPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred CCCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 123489999999999999987788999998864
No 463
>PLN02876 acyl-CoA dehydrogenase
Probab=97.80 E-value=0.0002 Score=89.92 Aligned_cols=145 Identities=18% Similarity=0.346 Sum_probs=91.0
Q ss_pred EEEEeeccCceEEEEEEECCCC--CEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCCe--eEEEeeeecc---ceE
Q 001783 593 IIKPISRGAFGRVFLAKKRTTG--DLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFV--VRFFYSFTCR---ENL 664 (1013)
Q Consensus 593 Ilk~LGkG~FGtVyLArdk~tg--k~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~-HPNI--VkL~e~fed~---~~L 664 (1013)
.++.|+.|.+..+|+......+ ..+++|+........ ....+.+|..+|+.+. |++| ++++.++.+. +..
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~--~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~ 119 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ--SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTA 119 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc--cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCc
Confidence 3677899999999998775432 467788754332111 1246779999999885 6654 7777776654 467
Q ss_pred EEEEEeccCCChHH--------------------HH---HhcC----------C---CCHHHHHHHHHH-----------
Q 001783 665 YLVMEYLNGGDLYS--------------------LL---RNLG----------C---LDEDVARVYIAE----------- 697 (1013)
Q Consensus 665 yLVMEy~~GGSL~d--------------------lL---~~~g----------~---LsE~~ar~Ia~Q----------- 697 (1013)
|+||||++|..+.+ .+ +... . +...++..+..+
T Consensus 120 flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~ 199 (822)
T PLN02876 120 FYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPP 199 (822)
T ss_pred eEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCC
Confidence 89999999864321 11 1100 0 011223222111
Q ss_pred ----HHHHHHHHHh-----------CCeeecccCCCceeecCC-Cc-EEEeecCCcccc
Q 001783 698 ----VVLALEYLHS-----------LRVVHRDLKPDNLLIAHD-GH-IKLTDFGLSKVG 739 (1013)
Q Consensus 698 ----IL~ALeYLHs-----------~GIIHRDIKPeNILLd~d-G~-VKLiDFGLAk~~ 739 (1013)
+...+.+|.. ..+||+|++|.|||++.+ +. +-|.||+++..+
T Consensus 200 ~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 200 RNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred CChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 2233556632 359999999999999853 33 579999998753
No 464
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.75 E-value=0.00013 Score=87.20 Aligned_cols=138 Identities=25% Similarity=0.370 Sum_probs=86.4
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccc----------------------------cHHHHHHHHHHHHHH---
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI----------------------------RKNAVESILAERDIL--- 643 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~----------------------------~~e~ie~~l~Ei~IL--- 643 (1013)
+.||.-+.|.|+.|+.+. |+.|||||-+..-.. -.+..+.+..|++.+
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 679999999999999865 999999986542100 001112222333332
Q ss_pred -------HhcCCCC------eeEEEeeeeccceEEEEEEeccCCChHHH--HHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001783 644 -------ISVRNPF------VVRFFYSFTCRENLYLVMEYLNGGDLYSL--LRNLGCLDEDVARVYIAEVVLALEYLHSL 708 (1013)
Q Consensus 644 -------~~L~HPN------IVkL~e~fed~~~LyLVMEy~~GGSL~dl--L~~~g~LsE~~ar~Ia~QIL~ALeYLHs~ 708 (1013)
..+.|-+ |+++|..+.. .-.|+||||+|..+.+. |.+.+ ++...+...+.+... +-|=..
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st--~RVLtME~~~G~~i~Dl~~i~~~g-i~~~~i~~~l~~~~~--~qIf~~ 320 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDLST--KRVLTMEYVDGIKINDLDAIDKRG-ISPHDILNKLVEAYL--EQIFKT 320 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhcCc--ceEEEEEecCCccCCCHHHHHHcC-CCHHHHHHHHHHHHH--HHHHhc
Confidence 2223333 5555544433 35899999999866544 44433 454433333222211 122247
Q ss_pred CeeecccCCCceeecC----CCcEEEeecCCccc
Q 001783 709 RVVHRDLKPDNLLIAH----DGHIKLTDFGLSKV 738 (1013)
Q Consensus 709 GIIHRDIKPeNILLd~----dG~VKLiDFGLAk~ 738 (1013)
|++|.|-+|.||++.. ++.+.|.|||+...
T Consensus 321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~ 354 (538)
T KOG1235|consen 321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAV 354 (538)
T ss_pred CCccCCCCCCcEEEecCCCCCccEEEEccccccc
Confidence 8999999999999984 56899999999763
No 465
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.74 E-value=0.00034 Score=74.63 Aligned_cols=128 Identities=24% Similarity=0.337 Sum_probs=90.6
Q ss_pred CCcEEEEEeeccCc-eEEEEEEECCCCCEEEEEEeeccc----------ccc--------HHHHHHHHHHHHHHHhcC--
Q 001783 589 DDFEIIKPISRGAF-GRVFLAKKRTTGDLFAIKVLKKAD----------MIR--------KNAVESILAERDILISVR-- 647 (1013)
Q Consensus 589 ddYeIlk~LGkG~F-GtVyLArdk~tgk~VALKVlkk~~----------~~~--------~e~ie~~l~Ei~IL~~L~-- 647 (1013)
.+++.++.||.|.- |.||+++. .|+.||||+++.-. ... ......|..|-+...+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 68999999999999 99999986 57899999943210 000 023346777877766654
Q ss_pred -CCCe--eEEEeeeecc------------------ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001783 648 -NPFV--VRFFYSFTCR------------------ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLH 706 (1013)
Q Consensus 648 -HPNI--VkL~e~fed~------------------~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLH 706 (1013)
+.++ |++++++.-. ....||.||++... .+.. .-+.+|+.-|..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~----~~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQI----RDIPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccch----hHHHHHHHHHHHHH
Confidence 4455 8998877322 11357888876633 1222 23557788888999
Q ss_pred hCCeeecccCCCceeecCCCcEEEeecCCc
Q 001783 707 SLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1013)
Q Consensus 707 s~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1013)
..||+-+|+++.|.. .-||+|||.+
T Consensus 182 k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HCCeeeccCcccccc-----CCEEEecccC
Confidence 999999999999975 2489999964
No 466
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.63 E-value=0.00029 Score=74.95 Aligned_cols=72 Identities=17% Similarity=0.163 Sum_probs=45.4
Q ss_pred EEeeccCce-EEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC---CeeEEEeeeecc---ceEEEE
Q 001783 595 KPISRGAFG-RVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNP---FVVRFFYSFTCR---ENLYLV 667 (1013)
Q Consensus 595 k~LGkG~FG-tVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HP---NIVkL~e~fed~---~~LyLV 667 (1013)
+.|+.|+.. .||.. +..+++|+..... ....+.+|..+|..+... -+.++++..... ...|++
T Consensus 3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~~~-----~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l 72 (235)
T cd05155 3 EPVDSGGTDNATFRL-----GDDMSVRLPSAAG-----YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSV 72 (235)
T ss_pred eeccCCCcccceEEc-----CCceEEEcCCccc-----hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEE
Confidence 457777766 58975 2347778754321 234678899998877532 344555443332 235889
Q ss_pred EEeccCCCh
Q 001783 668 MEYLNGGDL 676 (1013)
Q Consensus 668 MEy~~GGSL 676 (1013)
|++++|.++
T Consensus 73 ~~~i~G~~l 81 (235)
T cd05155 73 YRWLEGETA 81 (235)
T ss_pred EEeecCCCC
Confidence 999999766
No 467
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.48 E-value=0.0017 Score=69.00 Aligned_cols=131 Identities=23% Similarity=0.272 Sum_probs=91.9
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeecccc-------------ccHHHHHHHHHHHHHHHhcC------CCCeeEEE
Q 001783 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM-------------IRKNAVESILAERDILISVR------NPFVVRFF 655 (1013)
Q Consensus 595 k~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~-------------~~~e~ie~~l~Ei~IL~~L~------HPNIVkL~ 655 (1013)
..||.|+.=.||. |.. ..-..|||+..... ..........+|+.....+. +.+|.+++
T Consensus 7 ~~i~~G~~R~cy~--HP~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQ--HPD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEE--CCC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 4689999999994 333 34467899876540 00112355666666655554 78999999
Q ss_pred eeeeccceEEEEEEeccC------CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCC--C-
Q 001783 656 YSFTCRENLYLVMEYLNG------GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD--G- 726 (1013)
Q Consensus 656 e~fed~~~LyLVMEy~~G------GSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d--G- 726 (1013)
+..+++..+.+|+|.+.. -+|.+++.+ +.+++ .+.. .+-.-.+||-+.+|+.+|++|.||++... |
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~-~~~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~ 158 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKE-GGLTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGE 158 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHc-CCccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEEecCCCc
Confidence 999999999999998743 368888855 44665 3333 33445568889999999999999999653 2
Q ss_pred -cEEEeec
Q 001783 727 -HIKLTDF 733 (1013)
Q Consensus 727 -~VKLiDF 733 (1013)
.+.|+|-
T Consensus 159 ~~lvlIDG 166 (199)
T PF10707_consen 159 FRLVLIDG 166 (199)
T ss_pred eEEEEEeC
Confidence 4777773
No 468
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.47 E-value=9.1e-06 Score=103.59 Aligned_cols=253 Identities=19% Similarity=0.122 Sum_probs=165.4
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCC-CEEEEEEeeccccc--cHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc--
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTG-DLFAIKVLKKADMI--RKNAVESILAERDILISVRNPFVVRFFYSFTCR-- 661 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tg-k~VALKVlkk~~~~--~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~-- 661 (1013)
.+..|++.--+|-|.++ ++++.... .-+.+|+.+..+.. .+-..+....|++.++...|+++...+.-....
T Consensus 1227 ~~e~~EV~l~i~~~~~~---R~k~Lr~kid~Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s 1303 (2724)
T KOG1826|consen 1227 AMEHSEVNLGISNHFHF---RNKWLRSKIDWFKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSES 1303 (2724)
T ss_pred Hhhhhheeeecccceee---ccchHhhhhceeEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCC
Confidence 34567776666666554 33332211 12456665543321 122345666777777788899988776555443
Q ss_pred ceEEEEEEeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC-----CeeecccCCCceeecCCCcEEEee
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSL-----RVVHRDLKPDNLLIAHDGHIKLTD 732 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~dlL~~~----g~LsE~~ar~Ia~QIL~ALeYLHs~-----GIIHRDIKPeNILLd~dG~VKLiD 732 (1013)
...|.+++|+.+|.++..|-+. +.+.+..+.....+.+.+..-+|+. -.+|+++|+-|.+|..+-.+|+.+
T Consensus 1304 ~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk 1383 (2724)
T KOG1826|consen 1304 TEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGK 1383 (2724)
T ss_pred hHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcccccc
Confidence 3478999999999999999653 3455555555555557888887753 278999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHH
Q 001783 733 FGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFE 812 (1013)
Q Consensus 733 FGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYE 812 (1013)
+|+.+.. +. ........++++.|++|++...-.++.++|+|..|+-+|+
T Consensus 1384 ~gLdKIk--np-----------------------------~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~ 1432 (2724)
T KOG1826|consen 1384 GGLDKIK--NP-----------------------------VLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYL 1432 (2724)
T ss_pred ccccccc--Cc-----------------------------hHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 9998830 00 0112235688999999999988889888999999999999
Q ss_pred HHhCCCCCCCCChhHHHHhhhccCC---CCCCCCCCCCHHHHHHHHHhccCCcCCcCCCCCHHHHHhCCCCC
Q 001783 813 LIVGIPPFNAEHPQQIFDNILNRKI---PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1013)
Q Consensus 813 LLTGk~PF~g~~~~ei~qkIl~~~~---~~p~lp~~lS~elkDLI~rMLqkDPekRPg~~TAeELLqHPFFk 881 (1013)
...|..+|-. ..+.++++.. .+-.++.-.|.++......+|-+.-..|| .-...+.-+.|.
T Consensus 1433 rs~~n~~fi~-----flq~~Lkgiidn~tf~sIe~l~pgdaNve~~~~Ll~K~~~rp---~q~isls~d~~a 1496 (2724)
T KOG1826|consen 1433 RSDGNAYFIF-----FLQPALKGIIDNHTFFSIEKLKPGDANVEALHRLLWKYMERP---GQYISLSRDHFA 1496 (2724)
T ss_pred HhcccHHHHH-----HHHHHHcCcccccccccccccCCCcccHHHHHHHHHHhhhcc---hhhhhccccccc
Confidence 9999888743 2233333221 11222222344444455555555567888 556666666554
No 469
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.39 E-value=0.00067 Score=71.23 Aligned_cols=130 Identities=22% Similarity=0.331 Sum_probs=90.9
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCee-EEEeeeeccceEEEEEE
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVV-RFFYSFTCRENLYLVME 669 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIV-kL~e~fed~~~LyLVME 669 (1013)
.++.+.||+|.+|.||++.+. |..+|+|+-.... ....+..|.++|..+...++. ++|.+..+ ++.||
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds-----~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me 92 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEWR--GGEVALKVRRRDS-----PRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRME 92 (201)
T ss_pred hhhhhhhhcccccEEEEeecc--CceEEEEEecCCc-----chhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhh
Confidence 345678999999999999985 5689999865432 345677899999888766654 44443332 35599
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccC-CCceeecCCCcEEEeecCCccc
Q 001783 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLK-PDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 670 y~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIK-PeNILLd~dG~VKLiDFGLAk~ 738 (1013)
|+.|-.|...-... +..+ +..++.+---|-..||-|..|. |..++|..++.+.|+||..|+.
T Consensus 93 ~i~G~~L~~~~~~~---~rk~----l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 93 YIDGRPLGKLEIGG---DRKH----LLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhcCcchhhhhhcc---cHHH----HHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 99998887665431 2222 3344555445677899999986 5555555666999999998873
No 470
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.37 E-value=0.002 Score=67.92 Aligned_cols=137 Identities=16% Similarity=0.223 Sum_probs=80.3
Q ss_pred EEEeeccCceEEEEEEECC-CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC-CCeeEEEeeeeccceEEEEEEec
Q 001783 594 IKPISRGAFGRVFLAKKRT-TGDLFAIKVLKKADMIRKNAVESILAERDILISVRN-PFVVRFFYSFTCRENLYLVMEYL 671 (1013)
Q Consensus 594 lk~LGkG~FGtVyLArdk~-tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~H-PNIVkL~e~fed~~~LyLVMEy~ 671 (1013)
++.|..|-...||++.... .++.|++|+...... ..-...+|..++..+.. ...++++..+.. .+||||+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~----~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~----~~l~e~i 74 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE----LIIDRERELRIHKLLSKHGLAPKLYATFQN----GLIYEFI 74 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc----ceecHHHHHHHHHHHHhCCCCCeEEEEeCC----cEEEEee
Confidence 4677888888999997543 356889998754221 11122367777777743 334555554432 3799999
Q ss_pred cCCChHH--------------HHHh---cC-CC----------C-HHHHHHHHHH----------------------HH-
Q 001783 672 NGGDLYS--------------LLRN---LG-CL----------D-EDVARVYIAE----------------------VV- 699 (1013)
Q Consensus 672 ~GGSL~d--------------lL~~---~g-~L----------s-E~~ar~Ia~Q----------------------IL- 699 (1013)
+|.++.. .+.+ .. .. . ...+..+... +.
T Consensus 75 ~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 154 (235)
T cd05157 75 PGRTLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRD 154 (235)
T ss_pred CCCcCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHH
Confidence 9876521 1111 11 01 0 1122222111 11
Q ss_pred --HHHH-HHH----hCCeeecccCCCceeecC-CCcEEEeecCCccc
Q 001783 700 --LALE-YLH----SLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKV 738 (1013)
Q Consensus 700 --~ALe-YLH----s~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~ 738 (1013)
..|. .+- ..+++|+|+.|.|||++. ++.+.|+||..|..
T Consensus 155 ~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 155 EISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred HHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 1111 111 246999999999999998 57899999998863
No 471
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.22 E-value=0.0062 Score=71.11 Aligned_cols=80 Identities=18% Similarity=0.145 Sum_probs=54.7
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeecccc-c-c--HHHHHHHHHHHHHHHhcC---CCCeeEEEeeeeccceEEE
Q 001783 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM-I-R--KNAVESILAERDILISVR---NPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 594 lk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~-~-~--~e~ie~~l~Ei~IL~~L~---HPNIVkL~e~fed~~~LyL 666 (1013)
.+.||.|.+..||.+.....++.++||.-..... . . .-..++...|.+.|..+. ..++++++.+ +.+..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 4679999999999999864445899997431100 0 0 123456777888887753 3467788766 4456789
Q ss_pred EEEeccCCC
Q 001783 667 VMEYLNGGD 675 (1013)
Q Consensus 667 VMEy~~GGS 675 (1013)
|||++++..
T Consensus 109 VME~L~~~~ 117 (401)
T PRK09550 109 VMEDLSDHK 117 (401)
T ss_pred EEecCCCcc
Confidence 999998643
No 472
>PRK10593 hypothetical protein; Provisional
Probab=97.06 E-value=0.0067 Score=67.69 Aligned_cols=77 Identities=13% Similarity=0.043 Sum_probs=54.4
Q ss_pred EEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC---CCeeEEEeeeec---cceEEE
Q 001783 593 IIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN---PFVVRFFYSFTC---RENLYL 666 (1013)
Q Consensus 593 Ilk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~H---PNIVkL~e~fed---~~~LyL 666 (1013)
-.+.||.|..+.||..... ++ .+.+|+.+... ....+.+|...|+.+.- -.++++++.+.. .+..+|
T Consensus 18 ~~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~~~~-----~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~L 90 (297)
T PRK10593 18 RVECISEQPYAALWALYDS-QG-NPMPLMARSFS-----TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVL 90 (297)
T ss_pred eeeecCCccceeEEEEEcC-CC-CEEEEEecccc-----cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEE
Confidence 3567999999999988642 23 46778743210 12467889998888743 357788876654 356899
Q ss_pred EEEeccCCCh
Q 001783 667 VMEYLNGGDL 676 (1013)
Q Consensus 667 VMEy~~GGSL 676 (1013)
|||+++|+++
T Consensus 91 VmE~i~G~~~ 100 (297)
T PRK10593 91 LLERLRGVSV 100 (297)
T ss_pred EEeccCCEec
Confidence 9999998764
No 473
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.04 E-value=0.0019 Score=67.67 Aligned_cols=97 Identities=23% Similarity=0.250 Sum_probs=77.3
Q ss_pred HHHHHHHHhcCC-CCeeEEEeeeeccceEEEEEEeccCCChHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHh---CC
Q 001783 637 LAERDILISVRN-PFVVRFFYSFTCRENLYLVMEYLNGGDLYSL---LRNLGCLDEDVARVYIAEVVLALEYLHS---LR 709 (1013)
Q Consensus 637 l~Ei~IL~~L~H-PNIVkL~e~fed~~~LyLVMEy~~GGSL~dl---L~~~g~LsE~~ar~Ia~QIL~ALeYLHs---~G 709 (1013)
.+|.-+|+.+.+ ++++++++++-. ++|.||...+++... +...-..++.....++.+++..+++|+. ..
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 357777888876 699999998842 578999987766422 1122235888999999999999999997 44
Q ss_pred eeecccCCCceeecCCCcEEEeecCCcc
Q 001783 710 VVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1013)
Q Consensus 710 IIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1013)
+.-.|++|+|+-++++|++|++|...+.
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~ 110 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVF 110 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcc
Confidence 7779999999999999999999998765
No 474
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=96.98 E-value=0.002 Score=69.40 Aligned_cols=132 Identities=20% Similarity=0.224 Sum_probs=75.6
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCC-eeEEEeeeeccceEEEEEEeccCCC
Q 001783 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPF-VVRFFYSFTCRENLYLVMEYLNGGD 675 (1013)
Q Consensus 597 LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPN-IVkL~e~fed~~~LyLVMEy~~GGS 675 (1013)
+..|-.+.+|+.. .+++.|++|+....... -. -...+|..+++.+.... .++++.... -++||||++|..
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~--~~-~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~ 74 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKA--LG-VDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEV 74 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCccccc--cc-CcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcc
Confidence 4557778899886 35667888976542110 00 12356888887775332 234444332 268999999866
Q ss_pred hHH--------------HHH---hcC----CCC-HHHHHHHHHHH---------HHHHHHHHh--------CCeeecccC
Q 001783 676 LYS--------------LLR---NLG----CLD-EDVARVYIAEV---------VLALEYLHS--------LRVVHRDLK 716 (1013)
Q Consensus 676 L~d--------------lL~---~~g----~Ls-E~~ar~Ia~QI---------L~ALeYLHs--------~GIIHRDIK 716 (1013)
+.. .+. ... .++ ...+..+..++ ...+..+-. ..++|+|+.
T Consensus 75 ~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~ 154 (256)
T TIGR02721 75 ITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVH 154 (256)
T ss_pred cccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCC
Confidence 531 111 111 111 11222222222 111222211 258999999
Q ss_pred CCceeecCCCcEEEeecCCccc
Q 001783 717 PDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 717 PeNILLd~dG~VKLiDFGLAk~ 738 (1013)
|.|||++.++ +.|+||..|..
T Consensus 155 ~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 155 AYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred cCcEEEeCCC-CEEEeccccCc
Confidence 9999999877 78999998874
No 475
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.97 E-value=0.005 Score=68.27 Aligned_cols=141 Identities=21% Similarity=0.245 Sum_probs=82.3
Q ss_pred CcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC--CeeEEEeee------ecc
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNP--FVVRFFYSF------TCR 661 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HP--NIVkL~e~f------ed~ 661 (1013)
....++.++.|....||++.. .+| .+++|+..... . ...+..|..++..|... .+++++... ...
T Consensus 23 ~~~~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~--~---~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~ 95 (307)
T TIGR00938 23 ELLSLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV--K---AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLA 95 (307)
T ss_pred CceeccccCCccccceEEEEe-CCC-cEEEEEecCCC--C---HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcC
Confidence 344567788888889998864 334 57789875421 1 12344566666665322 234443321 223
Q ss_pred ceEEEEEEeccCCChH-----------HHH---Hhc-CCCC--------HHH-----HH----------HHHHHHHHHHH
Q 001783 662 ENLYLVMEYLNGGDLY-----------SLL---RNL-GCLD--------EDV-----AR----------VYIAEVVLALE 703 (1013)
Q Consensus 662 ~~LyLVMEy~~GGSL~-----------dlL---~~~-g~Ls--------E~~-----ar----------~Ia~QIL~ALe 703 (1013)
+..+++|+|++|..+. ..+ +.. ..++ ... .. .....+...++
T Consensus 96 g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~ 175 (307)
T TIGR00938 96 GKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELD 175 (307)
T ss_pred CeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHH
Confidence 5678999999985431 111 110 0010 000 00 01112334555
Q ss_pred HHH-------hCCeeecccCCCceeecCCCcEEEeecCCcc
Q 001783 704 YLH-------SLRVVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1013)
Q Consensus 704 YLH-------s~GIIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1013)
++. ..+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 176 ~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 176 YLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred HHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 554 2689999999999999988877899999876
No 476
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=96.82 E-value=0.011 Score=64.54 Aligned_cols=138 Identities=19% Similarity=0.161 Sum_probs=82.5
Q ss_pred EEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC--CeeEEEee------eeccceE
Q 001783 593 IIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNP--FVVRFFYS------FTCRENL 664 (1013)
Q Consensus 593 Ilk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HP--NIVkL~e~------fed~~~L 664 (1013)
-++.|..|....+|++.. .+..+++|+.... ....+..|..++..+.+. .+++++.. ....+..
T Consensus 18 ~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~~------~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~ 89 (296)
T cd05153 18 SFEGISAGIENTNYFVTT--DSGRYVLTLFEKV------SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKP 89 (296)
T ss_pred heecccCccccceEEEEe--CCCcEEEEEcCCC------ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCce
Confidence 356778888889998865 3346889987641 123455677777666432 24444431 1234567
Q ss_pred EEEEEeccCCChHH-----------HH---Hhc-CCCCH--------HHHH------------HHHHHHHHHHHHHHh--
Q 001783 665 YLVMEYLNGGDLYS-----------LL---RNL-GCLDE--------DVAR------------VYIAEVVLALEYLHS-- 707 (1013)
Q Consensus 665 yLVMEy~~GGSL~d-----------lL---~~~-g~LsE--------~~ar------------~Ia~QIL~ALeYLHs-- 707 (1013)
++|+++++|..+.. .+ +.. ..+.. .... .....+..++.++.+
T Consensus 90 ~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 169 (296)
T cd05153 90 AALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFD 169 (296)
T ss_pred EEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhh
Confidence 89999999866421 11 110 00000 0000 011123334455443
Q ss_pred -----CCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 708 -----LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 708 -----~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
.+++|+|+.|.|||++.++.+.|+||+.+..
T Consensus 170 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 170 PSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred hhcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 4799999999999999887788999998763
No 477
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.77 E-value=0.0078 Score=66.20 Aligned_cols=76 Identities=12% Similarity=0.101 Sum_probs=47.4
Q ss_pred EEEeeccCceEEEEEEECC------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCC-eeEEEeeeeccceEEE
Q 001783 594 IKPISRGAFGRVFLAKKRT------TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPF-VVRFFYSFTCRENLYL 666 (1013)
Q Consensus 594 lk~LGkG~FGtVyLArdk~------tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPN-IVkL~e~fed~~~LyL 666 (1013)
++.|..|-...||++.... .++.|++|+..... .......+|..++..+.... .+++++.+.. .+
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~----~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~ 74 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV----ELLIDRERELVVFARLSERNLGPKLYGIFPN----GR 74 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC----cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cc
Confidence 4556667777899887543 25789999976532 11234467777777764322 3456655542 35
Q ss_pred EEEeccCCChH
Q 001783 667 VMEYLNGGDLY 677 (1013)
Q Consensus 667 VMEy~~GGSL~ 677 (1013)
|+||++|..+.
T Consensus 75 v~e~i~G~~l~ 85 (302)
T cd05156 75 IEEFIPSRTLT 85 (302)
T ss_pred hhheeCCCcCC
Confidence 89999887653
No 478
>PRK05231 homoserine kinase; Provisional
Probab=96.73 E-value=0.022 Score=63.19 Aligned_cols=31 Identities=32% Similarity=0.358 Sum_probs=26.7
Q ss_pred CCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 708 LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 708 ~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
.|+||+|+.|.|||++.+...-|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 4899999999999998665568999998863
No 479
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.49 E-value=0.0021 Score=72.96 Aligned_cols=136 Identities=15% Similarity=0.179 Sum_probs=94.0
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc------cH-----------HH--HHHHHHHHHHHHhcCC-C-
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI------RK-----------NA--VESILAERDILISVRN-P- 649 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~------~~-----------e~--ie~~l~Ei~IL~~L~H-P- 649 (1013)
|.+...||-|.-+-||.+-+ ..|.++++|+-...+.. .+ -. .-...+|...|+.+.. -
T Consensus 94 ~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 66778899999999999988 56888999964322110 00 00 1134567777777642 2
Q ss_pred CeeEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCCCceeecCCCcEE
Q 001783 650 FVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIK 729 (1013)
Q Consensus 650 NIVkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VK 729 (1013)
-|++.+ +.+..|+|||++.|..|.+.-+-. + +..+...++.-+.-|-.+|+||+|..-=||+++++++++
T Consensus 173 pVPkpi----D~~RH~Vvmelv~g~Pl~~v~~v~---d---~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i~ 242 (465)
T KOG2268|consen 173 PVPKPI----DHNRHCVVMELVDGYPLRQVRHVE---D---PPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKIV 242 (465)
T ss_pred CCCCcc----cccceeeHHHhhcccceeeeeecC---C---hHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCEE
Confidence 133333 335678999999998886554221 1 233444566667778899999999999999999999999
Q ss_pred EeecCCcc
Q 001783 730 LTDFGLSK 737 (1013)
Q Consensus 730 LiDFGLAk 737 (1013)
++||--+.
T Consensus 243 vIDFPQmv 250 (465)
T KOG2268|consen 243 VIDFPQMV 250 (465)
T ss_pred EeechHhh
Confidence 99997553
No 480
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.01 E-value=0.046 Score=60.53 Aligned_cols=30 Identities=40% Similarity=0.633 Sum_probs=25.7
Q ss_pred CeeecccCCCceeecCCCc-EEEeecCCccc
Q 001783 709 RVVHRDLKPDNLLIAHDGH-IKLTDFGLSKV 738 (1013)
Q Consensus 709 GIIHRDIKPeNILLd~dG~-VKLiDFGLAk~ 738 (1013)
.++|+|++|.|||++.++. .-|+||+.+..
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 4899999999999997565 46999999875
No 481
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.95 E-value=0.11 Score=56.92 Aligned_cols=30 Identities=20% Similarity=0.418 Sum_probs=26.5
Q ss_pred CCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 708 LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 708 ~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
.+++|+|+.+.|||++. +.+.|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~ 216 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI 216 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence 57999999999999987 6789999997763
No 482
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=95.79 E-value=0.059 Score=62.41 Aligned_cols=76 Identities=21% Similarity=0.154 Sum_probs=48.8
Q ss_pred EeeccCceEEEEEEECCCCCEEEEEEeecc-c---cccHHHHHHHHHHHHHHHhcC--CC-CeeEEEeeeeccceEEEEE
Q 001783 596 PISRGAFGRVFLAKKRTTGDLFAIKVLKKA-D---MIRKNAVESILAERDILISVR--NP-FVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 596 ~LGkG~FGtVyLArdk~tgk~VALKVlkk~-~---~~~~e~ie~~l~Ei~IL~~L~--HP-NIVkL~e~fed~~~LyLVM 668 (1013)
.||.|....||++.....++.++||.-... + ..-.-...+..-|...|+... -| .++++|. .+++...+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence 479999999999998544467999864311 0 011223456667888886653 24 5666653 3455567999
Q ss_pred EeccC
Q 001783 669 EYLNG 673 (1013)
Q Consensus 669 Ey~~G 673 (1013)
|+++.
T Consensus 80 EdL~~ 84 (370)
T TIGR01767 80 EDLSH 84 (370)
T ss_pred hhCcc
Confidence 99954
No 483
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=95.76 E-value=0.064 Score=62.18 Aligned_cols=141 Identities=28% Similarity=0.268 Sum_probs=90.7
Q ss_pred EEEEeeccCceEEEEEEECCCCCEEEEEEeecccccc----------------------HHHH-HHHHHHHHHHHhcCCC
Q 001783 593 IIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIR----------------------KNAV-ESILAERDILISVRNP 649 (1013)
Q Consensus 593 Ilk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~----------------------~e~i-e~~l~Ei~IL~~L~HP 649 (1013)
+-..|..|--+-||.|.. .+|..+|||+++-+-+.- +..+ -....|.+-|.+++..
T Consensus 148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 345678899999999876 578889999987532110 1111 1223466666666544
Q ss_pred CeeEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeecccCCCceeecCCCcE
Q 001783 650 FVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLH-SLRVVHRDLKPDNLLIAHDGHI 728 (1013)
Q Consensus 650 NIVkL~e~fed~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLH-s~GIIHRDIKPeNILLd~dG~V 728 (1013)
.|+----... ....|||+|+.+.....=..+.-.++...++.+-.|++.-+.-|- .+++||.||.--|+|+ .+|.+
T Consensus 227 GIP~PePIlL--k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly-hdG~l 303 (520)
T KOG2270|consen 227 GIPCPEPILL--KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY-HDGKL 303 (520)
T ss_pred CCCCCCceee--ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE-ECCEE
Confidence 4321110000 234799999953221111112235777778887778777777664 6899999999999998 46899
Q ss_pred EEeecCCcc
Q 001783 729 KLTDFGLSK 737 (1013)
Q Consensus 729 KLiDFGLAk 737 (1013)
.|+|-+-+.
T Consensus 304 yiIDVSQSV 312 (520)
T KOG2270|consen 304 YIIDVSQSV 312 (520)
T ss_pred EEEEccccc
Confidence 999999776
No 484
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=95.74 E-value=0.088 Score=60.00 Aligned_cols=140 Identities=21% Similarity=0.295 Sum_probs=79.0
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC--CCeeEEEeeeeccc--eEEE
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN--PFVVRFFYSFTCRE--NLYL 666 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~H--PNIVkL~e~fed~~--~LyL 666 (1013)
..++..+-.|..-.+|..... ++.+++. ... ............+|..+|+.+.- .-+...++.+.++. ..|.
T Consensus 27 ~~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~-~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~ 102 (321)
T COG3173 27 LLIVEEISGGWSNDTFRLGDT--GQKYVLR-KPP-RGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFY 102 (321)
T ss_pred CceeeeccCCcccceEEEecC--CceEEEe-cCC-ccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceE
Confidence 334444433333344444432 6777777 221 11223344566778888877643 12344555555544 6799
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHH-HHHHHHH------------------------------------------
Q 001783 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIA-EVVLALE------------------------------------------ 703 (1013)
Q Consensus 667 VMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~-QIL~ALe------------------------------------------ 703 (1013)
||+|+.|..+...... ......++. .+...|.
T Consensus 103 v~~~veGe~~~~~~~~-----~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~ 177 (321)
T COG3173 103 VMEWVEGEVVWSALPP-----ESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRI 177 (321)
T ss_pred EEEEecceeccCcCCc-----ccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCC
Confidence 9999998433221110 000011111 3333333
Q ss_pred --------HHHh--------CCeeecccCCCceeecCCCcEEEeecCCcccc
Q 001783 704 --------YLHS--------LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVG 739 (1013)
Q Consensus 704 --------YLHs--------~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~ 739 (1013)
+|+. -.++|+|+.+.|||++.++-+=+.||+++.++
T Consensus 178 p~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 178 PLADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred chHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 3332 24799999999999999998999999998853
No 485
>PLN02236 choline kinase
Probab=95.51 E-value=0.12 Score=59.09 Aligned_cols=139 Identities=19% Similarity=0.215 Sum_probs=79.6
Q ss_pred EEEEEeeccCceEEEEEEECC----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCe-eEEEeeeeccceEEE
Q 001783 592 EIIKPISRGAFGRVFLAKKRT----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFV-VRFFYSFTCRENLYL 666 (1013)
Q Consensus 592 eIlk~LGkG~FGtVyLArdk~----tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNI-VkL~e~fed~~~LyL 666 (1013)
.-++.|-.|-.-.+|++.... .++.|.+|+..... ...+. -.+|..++..+..-++ .++++.+... .
T Consensus 39 ~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t---~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g----~ 110 (344)
T PLN02236 39 LQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV---ELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG----R 110 (344)
T ss_pred EEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC---Ceeec-hHHHHHHHHHHHHcCCCCceEEEECCc----e
Confidence 334455557778899887532 34689999876532 11122 2567777777653333 3555655432 5
Q ss_pred EEEeccCCChHHH--------------H---HhcC----C--CCHHHHHHHHHHH-----------------HHHHHHH-
Q 001783 667 VMEYLNGGDLYSL--------------L---RNLG----C--LDEDVARVYIAEV-----------------VLALEYL- 705 (1013)
Q Consensus 667 VMEy~~GGSL~dl--------------L---~~~g----~--LsE~~ar~Ia~QI-----------------L~ALeYL- 705 (1013)
|++|++|.+|... + +... . .....+..++.++ ...+..|
T Consensus 111 v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~ 190 (344)
T PLN02236 111 VEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLE 190 (344)
T ss_pred EEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHH
Confidence 8999988665311 1 1111 0 1122233333221 1111111
Q ss_pred ---H----hCCeeecccCCCceeecC-CCcEEEeecCCccc
Q 001783 706 ---H----SLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKV 738 (1013)
Q Consensus 706 ---H----s~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~ 738 (1013)
. ...++|+|+++.|||+++ ++.+.|+||..|..
T Consensus 191 ~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 191 KELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred HHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 1 236899999999999986 47899999998863
No 486
>PLN02756 S-methyl-5-thioribose kinase
Probab=95.10 E-value=0.19 Score=59.13 Aligned_cols=77 Identities=19% Similarity=0.134 Sum_probs=50.8
Q ss_pred EEEEeeccCceEEEEEEECCCCCEEEEEEeecccc-cc---HHHHHHHHHHHHHHHhcC---CCCeeEEEeeeeccceEE
Q 001783 593 IIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM-IR---KNAVESILAERDILISVR---NPFVVRFFYSFTCRENLY 665 (1013)
Q Consensus 593 Ilk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~-~~---~e~ie~~l~Ei~IL~~L~---HPNIVkL~e~fed~~~Ly 665 (1013)
..+.||.|....||++.+. +..|+||.-..... .. .....+...|...|+.+. ..++++++.+.. +.-+
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~v 111 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMAL 111 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCE
Confidence 4678899999999999873 45688987541111 00 013445556666666553 247888887766 4467
Q ss_pred EEEEeccC
Q 001783 666 LVMEYLNG 673 (1013)
Q Consensus 666 LVMEy~~G 673 (1013)
++||++++
T Consensus 112 lvME~L~~ 119 (418)
T PLN02756 112 IGMRYLEP 119 (418)
T ss_pred EEEeecCC
Confidence 88999977
No 487
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=94.60 E-value=0.24 Score=55.56 Aligned_cols=76 Identities=20% Similarity=0.312 Sum_probs=47.4
Q ss_pred cEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC---CCCeeEEEeeeeccceEEEE
Q 001783 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR---NPFVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 591 YeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~---HPNIVkL~e~fed~~~LyLV 667 (1013)
.+-.+.|+-|....+|... .+++.|-+|+-... ....+..|..-|+.|. --.+++++.+....+.-|||
T Consensus 19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~------~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLl 90 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNSES------GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLL 90 (288)
T ss_dssp --EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGG------GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEE
T ss_pred eeeeEecCCCChhheEEEE--CCCccEEEEecChh------hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEE
Confidence 3446778989999999887 67788999986522 2245677777777763 34678888888877778999
Q ss_pred EEeccCC
Q 001783 668 MEYLNGG 674 (1013)
Q Consensus 668 MEy~~GG 674 (1013)
|||++.+
T Consensus 91 le~l~~~ 97 (288)
T PF03881_consen 91 LEFLEMG 97 (288)
T ss_dssp EE-----
T ss_pred EEeecCC
Confidence 9999876
No 488
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=94.50 E-value=0.21 Score=56.57 Aligned_cols=139 Identities=15% Similarity=0.169 Sum_probs=76.4
Q ss_pred CcEEEEEeeccCceEEEEEEECCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCe-eEEEeeeeccceEE
Q 001783 590 DFEIIKPISRGAFGRVFLAKKRTT---GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFV-VRFFYSFTCRENLY 665 (1013)
Q Consensus 590 dYeIlk~LGkG~FGtVyLArdk~t---gk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNI-VkL~e~fed~~~Ly 665 (1013)
+.++. .|..|=...+|++..... +..|.+|+...... ..-.-.+|..+++.+..-++ +++++.+.. +
T Consensus 16 ~i~i~-~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~----~~IdR~~E~~il~~l~~~gl~P~~l~~~~~-G--- 86 (330)
T PLN02421 16 DFSVE-RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD----YVIDRERELQAIKYLSAAGFGAKLLGVFGN-G--- 86 (330)
T ss_pred ceEEE-EeCCcccceEEEEEecCCCCCCceEEEEEecCCcC----eEechHHHHHHHHHHHhcCCCCceeEEeCC-c---
Confidence 34444 444466778888865432 34788998754221 11122467777777754333 455655532 2
Q ss_pred EEEEeccCCChHH--------------HH---HhcC-C----C-CHHHHHHHHHHH----------------------HH
Q 001783 666 LVMEYLNGGDLYS--------------LL---RNLG-C----L-DEDVARVYIAEV----------------------VL 700 (1013)
Q Consensus 666 LVMEy~~GGSL~d--------------lL---~~~g-~----L-sE~~ar~Ia~QI----------------------L~ 700 (1013)
+|.+|++|..|.. .+ +... . . -...+..++.++ ..
T Consensus 87 ~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 166 (330)
T PLN02421 87 MIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRD 166 (330)
T ss_pred EeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHH
Confidence 5889988765521 11 1111 0 1 112233333222 11
Q ss_pred HHHH----HHhC----CeeecccCCCceeecC-CCcEEEeecCCcc
Q 001783 701 ALEY----LHSL----RVVHRDLKPDNLLIAH-DGHIKLTDFGLSK 737 (1013)
Q Consensus 701 ALeY----LHs~----GIIHRDIKPeNILLd~-dG~VKLiDFGLAk 737 (1013)
-+.. +... -++|.|+.+.|||+++ ++.++|+||..|-
T Consensus 167 ~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 167 EIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred HHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 1111 1122 2799999999999975 5789999999886
No 489
>PRK12396 5-methylribose kinase; Reviewed
Probab=94.12 E-value=0.25 Score=58.00 Aligned_cols=78 Identities=22% Similarity=0.160 Sum_probs=51.9
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeecc-c--cccHHHHHHHHHHHHHHHhcC--CC-CeeEEEeeeeccceEEEE
Q 001783 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKA-D--MIRKNAVESILAERDILISVR--NP-FVVRFFYSFTCRENLYLV 667 (1013)
Q Consensus 594 lk~LGkG~FGtVyLArdk~tgk~VALKVlkk~-~--~~~~e~ie~~l~Ei~IL~~L~--HP-NIVkL~e~fed~~~LyLV 667 (1013)
++.||.|.-..||++.+...++.++||.-... + ..-.-..++..-|...|+... -| +++++|. .+.+...+|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~--~D~e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL--FDSVMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE--ECcHHhhHH
Confidence 67899999999999998544567888863211 0 011223567777888887653 24 5667764 345566789
Q ss_pred EEeccC
Q 001783 668 MEYLNG 673 (1013)
Q Consensus 668 MEy~~G 673 (1013)
||+++.
T Consensus 112 MEdL~~ 117 (409)
T PRK12396 112 MEDLSD 117 (409)
T ss_pred HHhCcc
Confidence 999854
No 490
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=93.94 E-value=0.55 Score=52.42 Aligned_cols=30 Identities=17% Similarity=0.197 Sum_probs=28.0
Q ss_pred CeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 709 RVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 709 GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
+++|+|+.+.|||++.++.+.++||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 799999999999999999999999998874
No 491
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=92.97 E-value=0.17 Score=60.89 Aligned_cols=163 Identities=21% Similarity=0.304 Sum_probs=104.3
Q ss_pred HHHHHHHHHHhcCCCCeeEEEeeeecc-ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Q 001783 635 SILAERDILISVRNPFVVRFFYSFTCR-ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHR 713 (1013)
Q Consensus 635 ~~l~Ei~IL~~L~HPNIVkL~e~fed~-~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs~GIIHR 713 (1013)
.++-...+++.+.|+|...++++-... ....+|||++. -+|.+.+.... +-.. +++ .+|+.|-
T Consensus 28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~-~Sled~~~~~~-l~~~-------s~~-------~~~~~~~ 91 (725)
T KOG1093|consen 28 QILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYT-MSLEDILKTGN-LKDE-------SLL-------AHGVLHL 91 (725)
T ss_pred HHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhc-cchHHHHHhcc-cchh-------hhc-------cccccee
Confidence 455667788999999999888776653 45889999995 59999887643 2111 111 2233222
Q ss_pred ccCCCceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCcccchhhhhhhhhccccccCCCCCCCchhhc
Q 001783 714 DLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL 793 (1013)
Q Consensus 714 DIKPeNILLd~dG~VKLiDFGLAk~~~~~s~ddls~p~~~gttl~gd~~~~lt~s~~~~~~~~~~s~vGTp~YmAPEVL~ 793 (1013)
|| ++.+| -++.. ..+..|
T Consensus 92 -----~~-------~~~td-~~~t~--------------------------------------~~~~~~----------- 109 (725)
T KOG1093|consen 92 -----NI-------IYITD-HFLTK--------------------------------------YPSPIG----------- 109 (725)
T ss_pred -----hh-------hhccc-ccccc--------------------------------------CCCCCC-----------
Confidence 11 22233 11100 001111
Q ss_pred cCCCCccceeechhHHHHHHHhCCCCCCCCChhHHHHhhhccCCCCC---------CCCCCCCHHHHHHHHHhccCCcCC
Q 001783 794 GTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWP---------RVPEEMSPEAHDLIDRFLTEDPHQ 864 (1013)
Q Consensus 794 g~~ys~ksDIWSLGVILYELLTGk~PF~g~~~~ei~qkIl~~~~~~p---------~lp~~lS~elkDLI~rMLqkDPek 864 (1013)
+++||||+|.++.++.-|...|......+....+.+-...-. .+.-.++....+++.+|+...|..
T Consensus 110 -----pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~i 184 (725)
T KOG1093|consen 110 -----PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPII 184 (725)
T ss_pred -----cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCcccccc
Confidence 399999999999999999888766655555555544221100 011135667888999999999999
Q ss_pred cCCCCCHHHHHhCCCCCCC
Q 001783 865 RLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 865 RPg~~TAeELLqHPFFk~I 883 (1013)
|| ...++.+|+-|.++
T Consensus 185 r~---l~~~~~k~~i~~ev 200 (725)
T KOG1093|consen 185 RP---LPMELSKRCSFTEV 200 (725)
T ss_pred cc---chhHHhcCccHHHH
Confidence 99 88999999988765
No 492
>PTZ00384 choline kinase; Provisional
Probab=92.84 E-value=0.81 Score=53.44 Aligned_cols=29 Identities=28% Similarity=0.323 Sum_probs=24.7
Q ss_pred CCeeecccCCCceeecCCCcEEEeecCCcc
Q 001783 708 LRVVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1013)
Q Consensus 708 ~GIIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1013)
..++|.|+-+.|||.+. +.+.++||-.|.
T Consensus 227 ~VfCHNDL~~gNIL~~~-~~l~lID~EYA~ 255 (383)
T PTZ00384 227 VLFCHNDLFFTNILDFN-QGIYFIDFDFAG 255 (383)
T ss_pred eeeeeccCCcccEEecC-CCEEEEEecccc
Confidence 46899999999998754 569999999876
No 493
>PRK06148 hypothetical protein; Provisional
Probab=92.52 E-value=2 Score=56.08 Aligned_cols=30 Identities=37% Similarity=0.591 Sum_probs=26.2
Q ss_pred CCeeecccCCCceeecCCC--cEE-EeecCCcc
Q 001783 708 LRVVHRDLKPDNLLIAHDG--HIK-LTDFGLSK 737 (1013)
Q Consensus 708 ~GIIHRDIKPeNILLd~dG--~VK-LiDFGLAk 737 (1013)
.++||.|+.+.|||++.++ .+. |+|||-+.
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~ 235 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAV 235 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence 5799999999999999875 565 99999876
No 494
>PRK11768 serine/threonine protein kinase; Provisional
Probab=92.24 E-value=1.4 Score=49.94 Aligned_cols=29 Identities=28% Similarity=0.436 Sum_probs=24.7
Q ss_pred CCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 708 LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 708 ~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
.++||+|+.+.|||++ + .+.|+||+-+..
T Consensus 196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~ 224 (325)
T PRK11768 196 LLRLHGDCHPGNILWR-D-GPHFVDLDDARM 224 (325)
T ss_pred ccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence 4789999999999995 3 578999998763
No 495
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=91.39 E-value=0.37 Score=56.09 Aligned_cols=73 Identities=26% Similarity=0.428 Sum_probs=54.5
Q ss_pred ccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCCCceeecCCCcEEEeecCCccc
Q 001783 660 CRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1013)
Q Consensus 660 d~~~LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1013)
...+.|++|++- |++|. .+ ..-..+++..++.+.+..|.-+.. ..+=|||+.-.||||+ +|+|.|+||-+|+.
T Consensus 297 e~~y~yl~~kdh-gt~is-~i---k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 297 ETLYLYLHFKDH-GTPIS-II---KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred CceEEEEEEecC-Cceee-ee---ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence 344678888875 44543 22 223456777788887777776664 4689999999999999 99999999999984
No 496
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=90.51 E-value=1 Score=49.58 Aligned_cols=115 Identities=16% Similarity=0.200 Sum_probs=70.5
Q ss_pred cCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeeccceEEEEEEeccCCChHHH
Q 001783 600 GAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSL 679 (1013)
Q Consensus 600 G~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~~~LyLVMEy~~GGSL~dl 679 (1013)
|+.++.-.+..+- |- ..+|.+......- ...-+.++.++++++. .|++|..- +.-.+.+++|+|.....
T Consensus 73 ~gNsTl~~~kt~i-G~-L~lKKi~slp~~~--~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i--- 141 (308)
T PF07387_consen 73 NGNSTLLIGKTKI-GP-LFLKKIRSLPCCI--NDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI--- 141 (308)
T ss_pred CCceEEEEecccc-ch-hhhhhccCCCccc--chhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc---
Confidence 4445554444332 33 3455444322110 1234577888888764 58888732 33457799999954111
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccCCCceeecCCCcEEEeecCC
Q 001783 680 LRNLGCLDEDVARVYIAEVVLALEYLHS--LRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1013)
Q Consensus 680 L~~~g~LsE~~ar~Ia~QIL~ALeYLHs--~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1013)
...-++.+ =+.+|.-.|+ .+.+|+|..|+||+.|..|.+||.|=+.
T Consensus 142 ---------~~~N~i~a-gi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~ 189 (308)
T PF07387_consen 142 ---------NFSNFITA-GIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVC 189 (308)
T ss_pred ---------chhHHHHH-hHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhh
Confidence 11111221 1456777884 4799999999999999999999999874
No 497
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=89.60 E-value=1.9 Score=47.45 Aligned_cols=29 Identities=34% Similarity=0.635 Sum_probs=25.3
Q ss_pred eeecccCCCceeecCC--C---cEEEeecCCccc
Q 001783 710 VVHRDLKPDNLLIAHD--G---HIKLTDFGLSKV 738 (1013)
Q Consensus 710 IIHRDIKPeNILLd~d--G---~VKLiDFGLAk~ 738 (1013)
++|+|++..|||+..+ | .++++||-+++.
T Consensus 217 l~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~ 250 (294)
T PF02958_consen 217 LCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARY 250 (294)
T ss_pred EEcCccCHHhEeEccccccccccceeeccccccC
Confidence 8999999999999764 3 699999998874
No 498
>PTZ00296 choline kinase; Provisional
Probab=85.53 E-value=7.3 Score=46.51 Aligned_cols=28 Identities=29% Similarity=0.534 Sum_probs=24.1
Q ss_pred CeeecccCCCceeecCCCcEEEeecCCcc
Q 001783 709 RVVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1013)
Q Consensus 709 GIIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1013)
.++|.|+-+.|||.+.+ .++|+||-.|.
T Consensus 285 VfCHNDl~~~NiL~~~~-~l~LIDfEYAg 312 (442)
T PTZ00296 285 VFCHNDLQENNIINTNK-CLRLIDFEYSG 312 (442)
T ss_pred eEEeCCCCccceeecCC-CEEEEeecccc
Confidence 58999999999987654 49999999876
No 499
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=85.21 E-value=2.3 Score=50.41 Aligned_cols=61 Identities=30% Similarity=0.298 Sum_probs=44.2
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHhCCeeecccCCCceeecCC
Q 001783 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEY-LHSLRVVHRDLKPDNLLIAHD 725 (1013)
Q Consensus 664 LyLVMEy~~GGSL~dlL~~~g~LsE~~ar~Ia~QIL~ALeY-LHs~GIIHRDIKPeNILLd~d 725 (1013)
..|+-+|..|.++..++... ..++...+.++.-...||-- |--.+++|.|+.|.||++..+
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~~-~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~ 381 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKWK-SQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFN 381 (565)
T ss_pred ceeeeeccccccHHhhhhcc-cChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEec
Confidence 56777889998998888653 34566666666655555443 335689999999999999643
No 500
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=84.38 E-value=0.23 Score=59.44 Aligned_cols=73 Identities=27% Similarity=0.483 Sum_probs=61.1
Q ss_pred ccCCcEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCCeeEEEeeeecc
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR 661 (1013)
Q Consensus 587 ~lddYeIlk~LGkG~FGtVyLArdk~tgk~VALKVlkk~~~~~~e~ie~~l~Ei~IL~~L~HPNIVkL~e~fed~ 661 (1013)
..++|+....+|.|+||+|+-+..+.++..||||.+.... ........++|..-+..+.|++|++++..|...
T Consensus 47 ~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn--~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~ 119 (516)
T KOG1033|consen 47 EANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKN--REESRSRVLREVSSLAEFEHPGIKRYFHAWYER 119 (516)
T ss_pred hhccccccccccccCccccCCccccccchhhHHHHhcccc--hhhhhhhhhccccchhhhcccchhhheeceecC
Confidence 3477999999999999999999999888899999886543 234446778888889999999999999888654
Done!