Query 001783
Match_columns 1013
No_of_seqs 463 out of 3282
Neff 4.9
Searched_HMMs 29240
Date Tue Mar 26 16:34:55 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001783.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1079-1083//hhsearch_pdb/001783hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v5w_A G-protein coupled recep 1.0 1 1 515.5 25.3 290 585-910 185-485 (689)
2 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 504.6 23.2 280 585-896 28-310 (311)
3 3ubd_A Ribosomal protein S6 ki 1.0 1 1 487.0 20.8 276 587-897 22-304 (304)
4 2acx_A G protein-coupled recep 1.0 1 1 482.8 8.4 479 424-971 9-538 (576)
5 4b9d_A Serine/threonine-protei 1.0 1 1 475.7 24.1 259 587-882 22-282 (350)
6 4fie_A Serine/threonine-protei 1.0 1 1 473.0 26.7 257 589-883 151-407 (423)
7 4fih_A Serine/threonine-protei 1.0 1 1 471.9 25.0 257 589-883 74-330 (346)
8 3hyh_A Carbon catabolite-derep 1.0 1 1 461.7 23.5 259 585-882 9-268 (275)
9 4g3f_A NF-kappa-beta-inducing 1.0 1 1 461.1 23.1 256 585-877 54-310 (336)
10 3c4z_A Rhodopsin kinase; Ser/T 1.0 1 1 459.9 20.3 335 585-965 181-536 (543)
No 1
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=515.55 Aligned_cols=290 Identities=34% Similarity=0.644 Sum_probs=251.2
Q ss_pred CCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHH---HHHHHCCCCCEEEEEEEEECC
Q ss_conf 85568918998750059669999999899979999992042000178999999999---999946999733797565316
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAER---DILISVRNPFVVRFFYSFTCR 661 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkGsFGtVylAkdk~tgk~VAIKVIkks~~~~~e~ie~il~Ei---~IL~~L~HPNIVkL~~vfed~ 661 (1013)
...+++|++++.||+|+||+||+|+++.+|+.||||++.+..+........+.+|. .++..++|||||+++++|++.
T Consensus 185 ~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~ 264 (689)
T 3v5w_A 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP 264 (689)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS
T ss_pred CCCHHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC
T ss_conf 99568928888983164839999999999989999997578825255689999999999999648999871799999989
Q ss_pred CEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCC
Q ss_conf 22899997616888499998329999999999999999999998838806043699752224799399950687533445
Q 001783 662 ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1013)
Q Consensus 662 ~~lyLVMEyl~GGSL~dlL~k~g~Lse~~ir~Il~QIl~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAk~~~~ 741 (1013)
+++|||||||+||+|.+++.+.+.+++..+++|++||+.||+|||++|||||||||+|||++.+|++||+|||+|+...
T Consensus 265 ~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~- 343 (689)
T 3v5w_A 265 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS- 343 (689)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECS-
T ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCEEEECC-
T ss_conf 9889999468998299999866999999999999999999999997885416886687598089988964565566637-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHC-CCCCCCCCEEECHHHHHHHHHHCCCCC
Q ss_conf 7888999987668534799985210335565431025556898878810012-599996330522068999999399999
Q 001783 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-GTGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 742 ~s~ddls~p~~~gttL~gd~~p~ls~s~~~~~~~~~~s~vGTp~YmAPEVL~-g~~yt~ksDIWSLGVILYELLTGkpPF 820 (1013)
.....+.|||+.|||||++. +..|+.++|||||||++|||++|.+||
T Consensus 344 --------------------------------~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF 391 (689)
T 3v5w_A 344 --------------------------------KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391 (689)
T ss_dssp --------------------------------SCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred --------------------------------CCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf --------------------------------898777657867318899847999995999999999999998687999
Q ss_pred CCC---CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC--CCHHHHHHCCCCCCCCHHHHHHH--CC
Q ss_conf 999---946788756204899999999899889999998213994876999--99889970978889992267620--18
Q 001783 821 NAE---HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KA 893 (1013)
Q Consensus 821 ~~~---s~~ei~~kIl~~~~~~p~ip~~iS~elkDLI~kLLq~DPskRPg~--~TAeEILqHPFFk~Idw~~L~~~--k~ 893 (1013)
.+. +..+++..+...... +|..+|+++++||.+||++||.+|++. .+++++++||||++++|+.+..+ .+
T Consensus 392 ~~~~~~~~~~i~~~i~~~~~~---~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~~~~~~p 468 (689)
T 3v5w_A 392 RQHKTKDKHEIDRMTLTMAVE---LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 468 (689)
T ss_dssp CGGGCCCHHHHHHHHHHCCCC---CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHHTTCSCC
T ss_pred CCCCHHHHHHHHHHHCCCCCC---CCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCC
T ss_conf 999867799999850579888---87669999999999976089868799988899999669150478988997089995
Q ss_pred CCCCCCCCCCCCCCCCC
Q ss_conf 86678899878877556
Q 001783 894 AFVPTSESALDTSYFTS 910 (1013)
Q Consensus 894 pfvP~~~s~lD~s~Fss 910 (1013)
||+|......+.++|+.
T Consensus 469 P~~P~~~~~~~~~~fD~ 485 (689)
T 3v5w_A 469 PLIPPRGEVNAADAFDI 485 (689)
T ss_dssp SCCCCTTCSSTTBCCC-
T ss_pred CCCCCCCCCCCCCCCCC
T ss_conf 93699999886877777
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=504.61 Aligned_cols=280 Identities=37% Similarity=0.730 Sum_probs=250.2
Q ss_pred CCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEE
Q ss_conf 85568918998750059669999999899979999992042000178999999999999946999733797565316228
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkGsFGtVylAkdk~tgk~VAIKVIkks~~~~~e~ie~il~Ei~IL~~L~HPNIVkL~~vfed~~~l 664 (1013)
....++|++++.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.+|+.++|||||+++++|++.+++
T Consensus 28 ~~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 107 (311)
T 4aw0_A 28 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 107 (311)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred CCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEE
T ss_conf 88852368988983164849999999999989999998888877978999999999999867998989199999738989
Q ss_pred EEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCC
Q ss_conf 99997616888499998329999999999999999999998838806043699752224799399950687533445788
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEyl~GGSL~dlL~k~g~Lse~~ir~Il~QIl~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAk~~~~~s~ 744 (1013)
|||||||+||+|.+++.+.+.+++..++.|+.||+.||+|||++|||||||||+|||++.++++||+|||+|+......
T Consensus 108 yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~- 186 (311)
T 4aw0_A 108 YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES- 186 (311)
T ss_dssp EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT-
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCC-
T ss_conf 9999648998999999874999999999999999999999998878268787899698589888998768750257787-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCC
Q ss_conf 89999876685347999852103355654310255568988788100125999963305220689999993999999999
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 745 ddls~p~~~gttL~gd~~p~ls~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~yt~ksDIWSLGVILYELLTGkpPF~~~s 824 (1013)
......+.|||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+
T Consensus 187 ----------------------------~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 238 (311)
T 4aw0_A 187 ----------------------------KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238 (311)
T ss_dssp ----------------------------TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ----------------------------CCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf ----------------------------7654367556803079989768999968989989999999974989989979
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC---CHHHHHHCCCCCCCCHHHHHHHCCCCC
Q ss_conf 467887562048999999998998899999982139948769999---988997097888999226762018866
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG---GASEVKQHVFFKDINWDTLARQKAAFV 896 (1013)
Q Consensus 825 ~~ei~~kIl~~~~~~p~ip~~iS~elkDLI~kLLq~DPskRPg~~---TAeEILqHPFFk~Idw~~L~~~k~pfv 896 (1013)
..+++.+|.+....+ |..+++++++||.+||++||.+|+++. ....+++||||++++|+.+.+++||.+
T Consensus 239 ~~~~~~~i~~~~~~~---p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~~pP~l 310 (311)
T 4aw0_A 239 EGLIFAKIIKLEYDF---PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310 (311)
T ss_dssp HHHHHHHHHHTCCCC---CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCCCCC
T ss_pred HHHHHHHHHCCCCCC---CCCCCHHHHHHHHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCHHHHCCCCCCCC
T ss_conf 999999997199999---965699999999997628975780967975877987798758989899407999899
No 3
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=487.00 Aligned_cols=276 Identities=42% Similarity=0.812 Sum_probs=245.6
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEC---CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCE
Q ss_conf 5689189987500596699999998---9997999999204200017899999999999994699973379756531622
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKR---TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1013)
Q Consensus 587 ~lddYeIlk~LGkGsFGtVylAkdk---~tgk~VAIKVIkks~~~~~e~ie~il~Ei~IL~~L~HPNIVkL~~vfed~~~ 663 (1013)
..++|++++.||+|+||+||+|++. .+++.||+|++++...... ....+.+|+.+|+.++|||||+++++|++.+.
T Consensus 22 ~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 100 (304)
T 3ubd_A 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNHPFIVKLHYAFQTEGK 100 (304)
T ss_dssp CGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCCTTEECEEEEEEETTE
T ss_pred CCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHH-HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCE
T ss_conf 95565898897218883999999855887897999999815776847-89999999999987799799909999998999
Q ss_pred EEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCC
Q ss_conf 89999761688849999832999999999999999999999883880604369975222479939995068753344578
Q 001783 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 664 lyLVMEyl~GGSL~dlL~k~g~Lse~~ir~Il~QIl~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAk~~~~~s 743 (1013)
+|||||||+||+|.+++.+.+.+++..++.|+.||+.||+|||++|||||||||+|||++.+|++||+|||+|+....
T Consensus 101 ~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~-- 178 (304)
T 3ubd_A 101 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID-- 178 (304)
T ss_dssp EEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECCC--
T ss_conf 999997579988899997559999999999999999999999977995888878995786899887623663433268--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCC
Q ss_conf 88999987668534799985210335565431025556898878810012599996330522068999999399999999
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 744 ~ddls~p~~~gttL~gd~~p~ls~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~yt~ksDIWSLGVILYELLTGkpPF~~~ 823 (1013)
......+.+||+.|||||++.+..|+.++|||||||++|||++|.+||.+.
T Consensus 179 -----------------------------~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 229 (304)
T 3ubd_A 179 -----------------------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229 (304)
T ss_dssp -------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -----------------------------CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
T ss_conf -----------------------------876304544181507999965688787776361199999998598998984
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC--CCHHHHHHCCCCCCCCHHHHHHH--CCCCCC
Q ss_conf 946788756204899999999899889999998213994876999--99889970978889992267620--188667
Q 001783 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVP 897 (1013)
Q Consensus 824 s~~ei~~kIl~~~~~~p~ip~~iS~elkDLI~kLLq~DPskRPg~--~TAeEILqHPFFk~Idw~~L~~~--k~pfvP 897 (1013)
+..+++.+|.+...+ +|..+|+++.+||.+||++||.+||++ .+++++++||||++++|+.+..+ .|||+|
T Consensus 230 ~~~~~~~~i~~~~~~---~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP~~P 304 (304)
T 3ubd_A 230 DRKETMTMILKAKLG---MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304 (304)
T ss_dssp SHHHHHHHHHHCCCC---CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSSCC
T ss_pred CHHHHHHHHHCCCCC---CCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCCC
T ss_conf 999999999718999---987689999999999864698787999867899997690403789999984899949679
No 4
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=1.00 E-value=1 Score=482.79 Aligned_cols=479 Identities=28% Similarity=0.435 Sum_probs=338.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH-CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 87531243477888898668999999899877876224789871-15878778995313368877532178989999993
Q 001783 424 PSMACKTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQIDLLLA-GKGALSEHDDFPQMNELADIARCVATTPLDDDSSI 502 (1013)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~ 502 (1013)
.++.||.|.| |..+.++.+.++|++|..|+.++.+.|.. +.-.++.--+--++--+++...|.+. | +-...
T Consensus 9 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~ig~~l~~~~~~~~-~--~~~~~ 80 (576)
T 2acx_A 9 NTVLLKAREG-----GGGNRKGKSKKWRQMLQFPHISQCEELRLSLERDYHSLCERNPIGRLLFREFCATR-P--ELSRC 80 (576)
T ss_dssp -----CC------------CCCCCTTHHHHTCCCCSGGGHHHHHHSCCCHHHHHTTSHHHHHHHHHHHTTS-H--HHHHH
T ss_pred HHHHHHHHHC-----CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCC-C--CHHHH
T ss_conf 1899998745-----89986400146442368979138999986366588886402833099999998458-3--12689
Q ss_pred CHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH---------------------HHHHCCCCCCC-CCCEEE
Q ss_conf 12222110003667258786511687899999999998998---------------------64220489876-432010
Q 001783 503 PYLLSFLEDLRVVIDRRKFDALTVETFGARIEKLIREKYLQ---------------------LCELVTDDKVD-ITSTVI 560 (1013)
Q Consensus 503 ~~~l~~~~~~r~~~d~rk~~sit~e~~g~r~~~l~R~k~~~---------------------L~e~v~~d~l~-l~s~~I 560 (1013)
..++.-+.+.....+.++... ...+..+|.. +......+.+. +.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~l~~~~~~~~~~~l~~~~~ 150 (576)
T 2acx_A 81 VAFLDGVAEYEVTPDDKRKAC----------GRNLTQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTH 150 (576)
T ss_dssp HHHHHHHHHHHTSCTTTHHHH----------HHHHHHHHSCSSSCCSSTTCCHHHHHHHHHHHHHCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHH----------HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 999999986012660659999----------9999998619422112454798999999988742766899999999898
Q ss_pred CCCCCCCHHHHCCCCCCCCC--------CCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHH
Q ss_conf 68998814442024789988--------9989855689189987500596699999998999799999920420001789
Q 001783 561 EEDAPLEDDVVRSLRTSPIH--------PSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNA 632 (1013)
Q Consensus 561 ee~~~lEeevi~sl~~s~~~--------p~k~~~~lddYeIlk~LGkGsFGtVylAkdk~tgk~VAIKVIkks~~~~~e~ 632 (1013)
. .+.......+..+.+. ........++|++++.||+|+||.||+|+++.+++.||+|++.+........
T Consensus 151 -~--~l~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~ 227 (576)
T 2acx_A 151 -E--YLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG 227 (576)
T ss_dssp -H--HHTTHHHHHHHTSHHHHHHHHHHHHHTSCCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTC
T ss_pred -H--HHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHH
T ss_conf -7--6024750432211566566655455306766154189999822798799999998999789999988676432489
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCCCCHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHCCE
Q ss_conf 9999999999994699973379756531622899997616888499998329--99999999999999999999883880
Q 001783 633 VESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRV 710 (1013)
Q Consensus 633 ie~il~Ei~IL~~L~HPNIVkL~~vfed~~~lyLVMEyl~GGSL~dlL~k~g--~Lse~~ir~Il~QIl~ALeYLHs~GI 710 (1013)
...+.+|+.++..++||||+++++++.+...+|+||||++||+|.+++...+ .+++..++.|+.||+.||+|||++||
T Consensus 228 ~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gI 307 (576)
T 2acx_A 228 EAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI 307 (576)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
T ss_conf 99999999999875898772687788529989999974899909999986478899999999999999999999997898
Q ss_pred EECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf 60436997522247993999506875334457888999987668534799985210335565431025556898878810
Q 001783 711 VHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPE 790 (1013)
Q Consensus 711 IHRDIKPeNILId~~G~IKLsDFGLAk~~~~~s~ddls~p~~~gttL~gd~~p~ls~s~~~~~~~~~~s~vGTp~YmAPE 790 (1013)
+||||||+|||++.++++||+|||+|+.... .......+||+.|+|||
T Consensus 308 vHrDLKPeNILld~~g~vKL~DFGla~~~~~--------------------------------~~~~~~~~GT~~Y~APE 355 (576)
T 2acx_A 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPE--------------------------------GQTIKGRVGTVGYMAPE 355 (576)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECCT--------------------------------TCCEECCCSCGGGCCHH
T ss_pred ECCCCCHHEEEEECCCCEEEEECCCCEECCC--------------------------------CCCCCCCCCCCCCCCHH
T ss_conf 6057863418994788848976553234156--------------------------------76555667885626999
Q ss_pred HHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCC----HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 0125999963305220689999993999999999----467887562048999999998998899999982139948769
Q 001783 791 ILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH----PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRL 866 (1013)
Q Consensus 791 VL~g~~yt~ksDIWSLGVILYELLTGkpPF~~~s----~~ei~~kIl~~~~~~p~ip~~iS~elkDLI~kLLq~DPskRP 866 (1013)
++.+..|+.++|||||||++|||++|.+||.+.. ...+...+...... ++..++.++.+||.+||+.||.+||
T Consensus 356 vl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~---~p~~~s~~~~dLI~~lL~~dP~~R~ 432 (576)
T 2acx_A 356 VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE---YSERFSPQARSLCSQLLCKDPAERL 432 (576)
T ss_dssp HHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCC---CCTTSCHHHHHHHHHHTCSSGGGST
T ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC---CCCCCCHHHHHHHHHHCCCCHHHCC
T ss_conf 9808999963239999999999985899976665201278899876403446---7754798999999984539987837
Q ss_pred CCC--CHHHHHHCCCCCCCCHHHHHHH--CCCCCCCCCC-----CCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999--9889970978889992267620--1886678899-----878877556555--7998899889999899964446
Q 001783 867 GSG--GASEVKQHVFFKDINWDTLARQ--KAAFVPTSES-----ALDTSYFTSRYS--WNTTDENIYPASDFEDSSDADS 935 (1013)
Q Consensus 867 g~~--TAeEILqHPFFk~Idw~~L~~~--k~pfvP~~~s-----~lD~s~Fss~~s--~~~td~n~~~~~~~~~s~~~~s 935 (1013)
++. ++.++++||||++++|+.+... .+||.|.+.. ..|..+|..... ...++..++..+
T Consensus 433 g~~~~sa~eil~HpfF~~i~w~~l~~~~~~pp~~p~~~~~~~~~~~d~~~f~~~~~~~~~~~~~~~f~~f---------- 502 (576)
T 2acx_A 433 GCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKF---------- 502 (576)
T ss_dssp TCSSSHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCCCCC-----------------CHHHHHHHHHH----------
T ss_pred CCCCCCHHHHHHCHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHH----------
T ss_conf 8888899999729353168988895188899998983224567730176624467887883077787521----------
Q ss_pred CCCCCCCCC-CHHHHHHH-CCCC-CCCCCCCCCCCCCCC
Q ss_conf 789998886-11456521-0489-853368998763212
Q 001783 936 LSGSSSCLS-NRQEEVGD-ECGG-LAEFESGSSVNYSFS 971 (1013)
Q Consensus 936 ~sgs~s~~S-~~q~e~~~-e~~g-l~~f~~~~sv~~~f~ 971 (1013)
+..+++ +||++|.+ +|+. ++++...|+.+..++
T Consensus 503 ---~~~~~~~~~~~e~~~~~~~~~l~~~~~~g~~~~d~~ 538 (576)
T 2acx_A 503 ---ATGSVPIPWQNEMVETECFQELNVFGLDGSVPPDLD 538 (576)
T ss_dssp ---CCEECHHHHHHHHHHTTHHHHHHCBSSSCC------
T ss_pred ---CCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCC
T ss_conf ---358777640033331002555304577898997644
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=475.67 Aligned_cols=259 Identities=27% Similarity=0.524 Sum_probs=235.0
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEE
Q ss_conf 56891899875005966999999989997999999204200017899999999999994699973379756531622899
Q 001783 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1013)
Q Consensus 587 ~lddYeIlk~LGkGsFGtVylAkdk~tgk~VAIKVIkks~~~~~e~ie~il~Ei~IL~~L~HPNIVkL~~vfed~~~lyL 666 (1013)
.+++|++++.||+|+||+||+|+++.+++.||||++.+.... ....+.+.+|+.+|+.++|||||+++++|++.+.+||
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yi 100 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYI 100 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC-HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEE
T ss_conf 512558847970277939999998899989999998658789-7999999999999987799898919999998999999
Q ss_pred EEEECCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCC
Q ss_conf 99761688849999832--9999999999999999999998838806043699752224799399950687533445788
Q 001783 667 VMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 667 VMEyl~GGSL~dlL~k~--g~Lse~~ir~Il~QIl~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAk~~~~~s~ 744 (1013)
|||||+||+|.+++... ..+++..++.|+.||+.||+|||++|||||||||+|||++.+|++||+|||+|+...
T Consensus 101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~---- 176 (350)
T 4b9d_A 101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN---- 176 (350)
T ss_dssp EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCC----
T ss_pred EEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCCCCCEEEC----
T ss_conf 9948899839999997389999789999999999999999998991513597899798789998976465214406----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCC
Q ss_conf 89999876685347999852103355654310255568988788100125999963305220689999993999999999
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1013)
Q Consensus 745 ddls~p~~~gttL~gd~~p~ls~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~yt~ksDIWSLGVILYELLTGkpPF~~~s 824 (1013)
.......+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+
T Consensus 177 ---------------------------~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 229 (350)
T 4b9d_A 177 ---------------------------STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229 (350)
T ss_dssp ---------------------------HHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ---------------------------CCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf ---------------------------88541014578836039999879998959999999999999997879989969
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 4678875620489999999989988999999821399487699999889970978889
Q 001783 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 825 ~~ei~~kIl~~~~~~p~ip~~iS~elkDLI~kLLq~DPskRPg~~TAeEILqHPFFk~ 882 (1013)
..+++.+|..... +..+..+|+++.+||.+||++||.+|| ++.++|+||||+.
T Consensus 230 ~~~~~~~i~~~~~--~~~~~~~s~~~~~li~~~L~~dP~~R~---s~~e~l~hp~~~~ 282 (350)
T 4b9d_A 230 MKNLVLKIISGSF--PPVSLHYSYDLRSLVSQLFKRNPRDRP---SVNSILEKGFIAK 282 (350)
T ss_dssp HHHHHHHHHHTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSC---CHHHHHTSHHHHT
T ss_pred HHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHCCCCHHHCC---CHHHHHCCHHHHC
T ss_conf 9999999980899--999755799999999998558966790---8999963997616
No 6
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=473.02 Aligned_cols=257 Identities=32% Similarity=0.549 Sum_probs=232.3
Q ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEE
Q ss_conf 89189987500596699999998999799999920420001789999999999999469997337975653162289999
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkGsFGtVylAkdk~tgk~VAIKVIkks~~~~~e~ie~il~Ei~IL~~L~HPNIVkL~~vfed~~~lyLVM 668 (1013)
+.|+++++||+|+||+||+|+++.+|+.||||++.+.... ..+.+.+|+.+|+.++|||||+++++|.+.+.+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHH---HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEE
T ss_conf 8438616962481848999999999989999998625546---8999999999998579989871689999899999999
Q ss_pred EECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 76168884999983299999999999999999999988388060436997522247993999506875334457888999
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Eyl~GGSL~dlL~k~g~Lse~~ir~Il~QIl~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAk~~~~~s~ddls 748 (1013)
|||+||+|.+++.. +.+++..++.|+.||+.||+|||++|||||||||+|||++.+|++||+|||+|+....
T Consensus 228 Ey~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~------- 299 (423)
T 4fie_A 228 EFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK------- 299 (423)
T ss_dssp ECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCS-------
T ss_pred ECCCCCCHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEECCCCCEECCC-------
T ss_conf 69899828988761-6989999999999999999999988904465787778985899989803726547778-------
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf 98766853479998521033556543102555689887881001259999633052206899999939999999994678
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttL~gd~~p~ls~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~yt~ksDIWSLGVILYELLTGkpPF~~~s~~ei 828 (1013)
......+.+||+.|||||++.+..|+.++|||||||++|||++|.+||.+.+..++
T Consensus 300 ------------------------~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~ 355 (423)
T 4fie_A 300 ------------------------EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 355 (423)
T ss_dssp ------------------------SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred ------------------------CCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf ------------------------87643466647472799997799999689999999999999978799898699999
Q ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 8756204899999999899889999998213994876999998899709788899
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 829 ~~kIl~~~~~~p~ip~~iS~elkDLI~kLLq~DPskRPg~~TAeEILqHPFFk~I 883 (1013)
+..|.....+....+..+|+++++||.+||++||.+|+ ++.|+|+||||+..
T Consensus 356 ~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~---ta~ell~Hp~~~~~ 407 (423)
T 4fie_A 356 MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA---TAAELLKHPFLAKA 407 (423)
T ss_dssp HHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSC---CHHHHTTCGGGGGC
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCC---CHHHHHCCHHHCCC
T ss_conf 99997279988765012999999999998678956890---99999609875689
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=471.93 Aligned_cols=257 Identities=31% Similarity=0.545 Sum_probs=231.8
Q ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEE
Q ss_conf 89189987500596699999998999799999920420001789999999999999469997337975653162289999
Q 001783 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1013)
Q Consensus 589 ddYeIlk~LGkGsFGtVylAkdk~tgk~VAIKVIkks~~~~~e~ie~il~Ei~IL~~L~HPNIVkL~~vfed~~~lyLVM 668 (1013)
+.|+++++||+|+||+||+|+++.+|+.||||++.+.... ..+.+.+|+.+|+.++|||||+++++|.+.+.+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHH---HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEE
T ss_conf 7538707960272829999999899989999998527656---8999999999998679989991999999899999999
Q ss_pred EECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 76168884999983299999999999999999999988388060436997522247993999506875334457888999
Q 001783 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1013)
Q Consensus 669 Eyl~GGSL~dlL~k~g~Lse~~ir~Il~QIl~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAk~~~~~s~ddls 748 (1013)
|||+||+|.+++.+ +.+++..++.|+.||+.||+|||++|||||||||+|||++.+|++||+|||+|+.....
T Consensus 151 Ey~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~------ 223 (346)
T 4fih_A 151 EFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE------ 223 (346)
T ss_dssp CCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS------
T ss_pred ECCCCCCHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCC------
T ss_conf 69899808999871-89899999999999999999999888355627889978879998899027575366788------
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf 98766853479998521033556543102555689887881001259999633052206899999939999999994678
Q 001783 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1013)
Q Consensus 749 ~p~~~gttL~gd~~p~ls~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~yt~ksDIWSLGVILYELLTGkpPF~~~s~~ei 828 (1013)
.....+.+||+.|||||++.+..|+.++|||||||++|||++|.+||.+.+..++
T Consensus 224 -------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~ 278 (346)
T 4fih_A 224 -------------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 278 (346)
T ss_dssp -------------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred -------------------------CCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf -------------------------7753465627582799997799999689999999999999978799898599999
Q ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 8756204899999999899889999998213994876999998899709788899
Q 001783 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1013)
Q Consensus 829 ~~kIl~~~~~~p~ip~~iS~elkDLI~kLLq~DPskRPg~~TAeEILqHPFFk~I 883 (1013)
+..|.....+....+..+|+++++||.+||++||.+|| ++.|+|+||||+..
T Consensus 279 ~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~---ta~e~l~Hp~~~~~ 330 (346)
T 4fih_A 279 MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA---TAAELLKHPFLAKA 330 (346)
T ss_dssp HHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSC---CHHHHTTCGGGGGC
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCC---CHHHHHCCHHHCCC
T ss_conf 99997179998875022999999999998679956890---99999609865689
No 8
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=461.72 Aligned_cols=259 Identities=32% Similarity=0.613 Sum_probs=235.4
Q ss_pred CCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEE
Q ss_conf 85568918998750059669999999899979999992042000178999999999999946999733797565316228
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkGsFGtVylAkdk~tgk~VAIKVIkks~~~~~e~ie~il~Ei~IL~~L~HPNIVkL~~vfed~~~l 664 (1013)
+..+++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.+++.++|||||++++++.+.+.+
T Consensus 9 G~~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~ 88 (275)
T 3hyh_A 9 GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI 88 (275)
T ss_dssp -----CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CCEEECEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEE
T ss_conf 98933868999982176819999999999989999998378867878999999999999877998999299999989989
Q ss_pred EEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCC
Q ss_conf 99997616888499998329999999999999999999998838806043699752224799399950687533445788
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1013)
Q Consensus 665 yLVMEyl~GGSL~dlL~k~g~Lse~~ir~Il~QIl~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAk~~~~~s~ 744 (1013)
|+||||| +|+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+...
T Consensus 89 ~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~---- 163 (275)
T 3hyh_A 89 IMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT---- 163 (275)
T ss_dssp EEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EEEEECC-CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECC----
T ss_conf 9999278-99789999874999999999999999999999998893066687587688799989994547772667----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC-CCCCEEECHHHHHHHHHHCCCCCCCC
Q ss_conf 89999876685347999852103355654310255568988788100125999-96330522068999999399999999
Q 001783 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH-GTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 745 ddls~p~~~gttL~gd~~p~ls~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~y-t~ksDIWSLGVILYELLTGkpPF~~~ 823 (1013)
......+.+||+.|||||++.+..| +.++|||||||++|+|++|++||.+.
T Consensus 164 ----------------------------~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~ 215 (275)
T 3hyh_A 164 ----------------------------DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215 (275)
T ss_dssp ---------------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ----------------------------CCCCCCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf ----------------------------8874677028935277455068988898365687899999999887998998
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 94678875620489999999989988999999821399487699999889970978889
Q 001783 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1013)
Q Consensus 824 s~~ei~~kIl~~~~~~p~ip~~iS~elkDLI~kLLq~DPskRPg~~TAeEILqHPFFk~ 882 (1013)
+..+++..+...... +|..+|+++++||.+||++||.+|| +++|+++||||+.
T Consensus 216 ~~~~~~~~i~~~~~~---~p~~~s~~~~~li~~~L~~dP~~R~---s~~eil~hpw~k~ 268 (275)
T 3hyh_A 216 SIPVLFKNISNGVYT---LPKFLSPGAAGLIKRMLIVNPLNRI---SIHEIMQDDWFKV 268 (275)
T ss_dssp SHHHHHHHHHHTCCC---CCTTSCHHHHHHHHHHSCSSGGGSC---CHHHHHHCHHHHT
T ss_pred CHHHHHHHHHCCCCC---CCCCCCHHHHHHHHHHCCCCHHHCC---CHHHHHCCCCCCC
T ss_conf 999999999749999---9877999999999998658966891---9999971920065
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=461.12 Aligned_cols=256 Identities=26% Similarity=0.436 Sum_probs=226.9
Q ss_pred CCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEE
Q ss_conf 85568918998750059669999999899979999992042000178999999999999946999733797565316228
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkGsFGtVylAkdk~tgk~VAIKVIkks~~~~~e~ie~il~Ei~IL~~L~HPNIVkL~~vfed~~~l 664 (1013)
...++.|++.++||+|+||+||+|+++.+++.||||++++... ..+|+.+++.++|||||+++++|.+.+.+
T Consensus 54 ~~~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~ 125 (336)
T 4g3f_A 54 REEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWV 125 (336)
T ss_dssp CBTTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEE
T ss_pred HCCHHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH--------HHHHHHHHHHCCCCCCCCEEEEEEECCEE
T ss_conf 2253351768685138780999999889998999999788886--------99999999857998999399999989999
Q ss_pred EEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCC-CEEEEECCCCCCCCCCC
Q ss_conf 99997616888499998329999999999999999999998838806043699752224799-39995068753344578
Q 001783 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-HIKLTDFGLSKVGLINS 743 (1013)
Q Consensus 665 yLVMEyl~GGSL~dlL~k~g~Lse~~ir~Il~QIl~ALeYLHs~GIIHRDIKPeNILId~~G-~IKLsDFGLAk~~~~~s 743 (1013)
|||||||+||+|.+++.+.+.+++..++.|+.||+.||+|||++|||||||||+|||++.+| ++||+|||+|+......
T Consensus 126 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp EEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEECCCCEEEEEECCCCEECCCCC
T ss_conf 99996659986999998769999999999999999999999988904261677887995899979996278776856787
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCC
Q ss_conf 88999987668534799985210335565431025556898878810012599996330522068999999399999999
Q 001783 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1013)
Q Consensus 744 ~ddls~p~~~gttL~gd~~p~ls~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~yt~ksDIWSLGVILYELLTGkpPF~~~ 823 (1013)
. ..........+||+.|||||++.+..|+.++|||||||++|||++|.+||.+.
T Consensus 206 ~--------------------------~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~ 259 (336)
T 4g3f_A 206 L--------------------------GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259 (336)
T ss_dssp ----------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred C--------------------------CCCEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 6--------------------------54022178545580200899988999890899999999999999786998998
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC
Q ss_conf 946788756204899999999899889999998213994876999998899709
Q 001783 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1013)
Q Consensus 824 s~~ei~~kIl~~~~~~p~ip~~iS~elkDLI~kLLq~DPskRPg~~TAeEILqH 877 (1013)
+..+++.+|.....+++.++..+++.+.+||.+||++||.+|| ++.|+++|
T Consensus 260 ~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~---sa~el~~~ 310 (336)
T 4g3f_A 260 FRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRA---SAMELRRK 310 (336)
T ss_dssp CCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSC---CHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHCCCCHHHCC---CHHHHHHH
T ss_conf 9999999998089980025866799999999997628976895---99999999
No 10
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=1.00 E-value=1 Score=459.88 Aligned_cols=335 Identities=30% Similarity=0.579 Sum_probs=270.7
Q ss_pred CCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEE
Q ss_conf 85568918998750059669999999899979999992042000178999999999999946999733797565316228
Q 001783 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1013)
Q Consensus 585 ~~~lddYeIlk~LGkGsFGtVylAkdk~tgk~VAIKVIkks~~~~~e~ie~il~Ei~IL~~L~HPNIVkL~~vfed~~~l 664 (1013)
....++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|..++..++||||+++++++.+...+
T Consensus 181 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l 260 (543)
T 3c4z_A 181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL 260 (543)
T ss_dssp CCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CCCHHHEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEE
T ss_conf 67750568888985389969999999999959999998868742168999999999999866998870588999638878
Q ss_pred EEEEEECCCCCHHHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCC
Q ss_conf 9999761688849999832----999999999999999999999883880604369975222479939995068753344
Q 001783 665 YLVMEYLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1013)
Q Consensus 665 yLVMEyl~GGSL~dlL~k~----g~Lse~~ir~Il~QIl~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAk~~~ 740 (1013)
|+||||++||+|..++... ..+++..++.|+.||+.||.|||++||+||||||+|||++.+|++||+|||+++...
T Consensus 261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEEEECCEEEECC
T ss_conf 99997046887899998732135553499999999999999999998698415787688799279977970043014505
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEECHHHHHHHHHHCCCCC
Q ss_conf 57888999987668534799985210335565431025556898878810012599996330522068999999399999
Q 001783 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1013)
Q Consensus 741 ~~s~ddls~p~~~gttL~gd~~p~ls~s~~~~~~~~~~s~vGTp~YmAPEVL~g~~yt~ksDIWSLGVILYELLTGkpPF 820 (1013)
.. .......+||+.|+|||++.+..|+.++|||||||++|||++|.+||
T Consensus 341 ~~-------------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF 389 (543)
T 3c4z_A 341 AG-------------------------------QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389 (543)
T ss_dssp TT-------------------------------CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CC-------------------------------CCCCCCCCCCCCCCCHHHHCCCCCCHHHHCCCCHHHHHHHHHCCCCC
T ss_conf 78-------------------------------86421014775542825442789991885686429999998489998
Q ss_pred CCC----CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC--CHHHHHHCCCCCCCCHHHHHHH--C
Q ss_conf 999----9467887562048999999998998899999982139948769999--9889970978889992267620--1
Q 001783 821 NAE----HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQ--K 892 (1013)
Q Consensus 821 ~~~----s~~ei~~kIl~~~~~~p~ip~~iS~elkDLI~kLLq~DPskRPg~~--TAeEILqHPFFk~Idw~~L~~~--k 892 (1013)
.+. ...+++..+...... +|..++.++.+||.+||+.||.+||+.. +++++++||||++++|..+... .
T Consensus 390 ~~~~~~~~~~~~~~~i~~~~~~---~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~~l~~~~~~ 466 (543)
T 3c4z_A 390 RARGEKVENKELKQRVLEQAVT---YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLT 466 (543)
T ss_dssp CCTTCCCCHHHHHHHHHHCCCC---CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCHHHHHTTCSC
T ss_pred CCCCCCHHHHHHHHHHHHCCCC---CCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCC
T ss_conf 7776420078999998605667---8743699999999986649976789986568999970921117998999707899
Q ss_pred CCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCC-CHHHHHHH-CCCC-CCCCCCC
Q ss_conf 886678899-----8788775565557998899889999899964446789-998886-11456521-0489-8533689
Q 001783 893 AAFVPTSES-----ALDTSYFTSRYSWNTTDENIYPASDFEDSSDADSLSG-SSSCLS-NRQEEVGD-ECGG-LAEFESG 963 (1013)
Q Consensus 893 ~pfvP~~~s-----~lD~s~Fss~~s~~~td~n~~~~~~~~~s~~~~s~sg-s~s~~S-~~q~e~~~-e~~g-l~~f~~~ 963 (1013)
+||+|.... ..|..+|+.... ..+ +..+...+.+ +..+.+ +||++|++ +|++ +|.+.++
T Consensus 467 pp~~P~~~~~~~~~~~d~~~f~~~~~-----------~~~-~~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (543)
T 3c4z_A 467 PPFVPDSRTVYAKNIQDVGAFSTVKG-----------VAF-EKADTEFFQEFASGTCPIPWQEEMIETGVFGDLNVWRPD 534 (543)
T ss_dssp CSCCCCSSSCCSCC----CCCC---C-----------CCC-CHHHHHHHHHHCCEECHHHHHHHHHHTTHHHHHTCSCC-
T ss_pred CCCCCCCCCCCCCCCHHHHHCCCCCC-----------CCC-CCCHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHCCCCCC
T ss_conf 89778843234578224565555678-----------778-820466763577788772577765421528774477888
Q ss_pred CC
Q ss_conf 98
Q 001783 964 SS 965 (1013)
Q Consensus 964 ~s 965 (1013)
|.
T Consensus 535 ~~ 536 (543)
T 3c4z_A 535 GV 536 (543)
T ss_dssp --
T ss_pred CC
T ss_conf 76
Done!