BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001788
(1013 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359484916|ref|XP_002266859.2| PREDICTED: chaperone protein ClpB-like [Vitis vinifera]
Length = 1060
Score = 1336 bits (3457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 714/1070 (66%), Positives = 833/1070 (77%), Gaps = 69/1070 (6%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAGLSTIQQTLTPEAASVLNHSIAEA RRNHGQTTPLHVAATLL SPSG+LRQACI+SH
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLGSPSGFLRQACIRSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQ 120
PNSSHPLQCRALELCFSVALERLPTA QN+SPGL+PPISNALMAALKRAQAHQRRGCPEQ
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTA-QNISPGLEPPISNALMAALKRAQAHQRRGCPEQ 119
Query: 121 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNS-SPI 179
QQQPLLAVKVEL+QLIISILDDPSVSRVMREASFSSPAVKATIEQS+NS + + S SPI
Sbjct: 120 QQQPLLAVKVELQQLIISILDDPSVSRVMREASFSSPAVKATIEQSMNSPPTPNVSPSPI 179
Query: 180 GL-GFR-----------PSSRNLYMNPRL------------------------------- 196
GL GFR +RNLY+NPRL
Sbjct: 180 GLGGFRGPGAPTSTPTPTPTRNLYLNPRLQQQGNAATAAAANQSGHQRAEEVKRVVDILL 239
Query: 197 --QQAGGVCGGQSEPEMVVRESLAKIESKEL-DGVLKNVQIIRLDKDFT---CDKAGIVS 250
++ V G+SEPE V++E L +IE ++ DG LKNV++I L ++ + D+ I +
Sbjct: 240 RTKKRNPVLVGESEPEAVMKELLRRIEKRDFGDGPLKNVEVISLHRELSLNNSDRTQIPT 299
Query: 251 KLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAE----VV 306
KLK+LG L+E + G G +ILDLGDLKWLVEQ V + GV SGT+ QQV++E V
Sbjct: 300 KLKELGRLVEARIGGG-SIILDLGDLKWLVEQPV-NLGVAGSGTV--GQQVVSEAGRAAV 355
Query: 307 AEIGKLVARFG-GGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMF 365
AE+GKL+A FG G GRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAA+TP+ G+F
Sbjct: 356 AEMGKLLATFGEGSNGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAARTPVPGLF 415
Query: 366 PRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAK 425
R G+NGILSSSVESL+P+K+ F T ALPRRVSEN+DPA++MSCC QC++NYEQEL K
Sbjct: 416 SRFGTNGILSSSVESLTPMKN-FPTAITALPRRVSENMDPAQKMSCCPQCMENYEQELGK 474
Query: 426 L-SKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQK 484
L +EFEKSSSEVKSEV+R LPQWL NAKA DGD KT +Q++ KDQ+LIWKQK Q+L K
Sbjct: 475 LEGQEFEKSSSEVKSEVSRSSLPQWLKNAKALDGDVKTTDQSQTKDQELIWKQKPQDLLK 534
Query: 485 KWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQL 544
KWNDTCL+ HPNFH +L ERI P LSMTGLYN+ LL RQ FQPK+Q RNLG+TLQL
Sbjct: 535 KWNDTCLHLHPNFHQPNLNSERITPTALSMTGLYNATLLGRQAFQPKLQPTRNLGETLQL 594
Query: 545 NSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNK 604
NSN+V++QP E+AV+P SPVRTDLVLGR+K+ E+ EK H E VKDF CISSE NK
Sbjct: 595 NSNLVANQPCEQAVTPPGSPVRTDLVLGRTKINETTTEKIHKEHVKDFFQCISSE-SLNK 653
Query: 605 LHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKG 664
HE QND+L PLD DS K+LLK L EKV WQQ+AA VATTVTQCK+GNGKRR AGSKG
Sbjct: 654 FHELQNDKL-SPLDADSVKKLLKGLAEKVSWQQDAARTVATTVTQCKMGNGKRRSAGSKG 712
Query: 665 DMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEA 724
D+WLLF GPDR+GKKKMA+ALSELV G +PIMI LG RRD E ++ RGKTA+D+I EA
Sbjct: 713 DIWLLFTGPDRIGKKKMAAALSELVCGVNPIMICLGSRRDDGELDMNFRGKTAVDRIAEA 772
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
V+RN FSVI+LEDIDEADM+V+G+IKRAMERGRLVDS+GRE+SLGNVIFILTA+WL D+
Sbjct: 773 VRRNHFSVIMLEDIDEADMLVQGSIKRAMERGRLVDSHGREVSLGNVIFILTANWLVDNR 832
Query: 785 KFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGLSFD 844
K LS L+E+KL S+A G WQL+LS K+ KRRA+WL +E+RSTKPRKE GS LSFD
Sbjct: 833 KSLSNSTLLNEEKLASIAGGGWQLKLSASEKSAKRRANWLHDEDRSTKPRKENGSALSFD 892
Query: 845 LNKAADVGDDK-DGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKP 903
LN+AAD DD+ DGS NSSDLT+DHE+E G NR L P TS S++LLNSVD+ I FKP
Sbjct: 893 LNQAADTEDDRADGSRNSSDLTIDHEDEQGPENRCL--PPTSA-SRELLNSVDNVITFKP 949
Query: 904 VDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGRTGLEDWTEKVLVPS 963
VDF IR V + I +KFSS++GD LSI++ DEALEK++GGVWLGR+GLE+W EKVLVP
Sbjct: 950 VDFNPIRHQVRSCIARKFSSVMGDKLSIQVEDEALEKILGGVWLGRSGLEEWAEKVLVPG 1009
Query: 964 LHQLKLRLPNNATAATDESATVRLE-LDDGSGSRSHGELLPSSIRVVVEG 1012
HQLK + + A + + VRLE D S SR +G+ LPS I VVV G
Sbjct: 1010 FHQLKASMSSTDAACDESTMLVRLEFFDSDSDSRGYGDWLPSKITVVVGG 1059
>gi|449506714|ref|XP_004162827.1| PREDICTED: uncharacterized LOC101218254 [Cucumis sativus]
Length = 1055
Score = 1226 bits (3173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 655/1061 (61%), Positives = 791/1061 (74%), Gaps = 61/1061 (5%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAGLSTIQQTLTPEAASVLNHSIAEA RRNHGQTTPLHVAATLL+SP+G+LRQACIKSH
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLSSPTGFLRQACIKSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQ 120
PNSSHPLQCRALELCFSVALERLPTAQ N SPG +PPISNALMAALKRAQAHQRRGCPEQ
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTAQ-NASPGAEPPISNALMAALKRAQAHQRRGCPEQ 119
Query: 121 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIG 180
QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS+NS S+S G
Sbjct: 120 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSMNSPAPASSSPIGG 179
Query: 181 LGFRPSS----RNLYMNPRLQQAGGVCG---------------------------GQSEP 209
LGFRPS RNLY+NPRLQQ G V G+SEP
Sbjct: 180 LGFRPSPVGPPRNLYLNPRLQQQGSVAPPVQQRGEEVRKVFDILLRSKKRNPVLVGESEP 239
Query: 210 EMVVRESLAKIESKEL-DGVLKNVQIIRLDKDF-TCDKAGIVSKLKDLGALIET---KFG 264
E VV+E L +IE++EL DG L NVQ+I DK+ + D+ I +LK+LG L+E+ K
Sbjct: 240 EAVVKELLRRIENRELGDGTLGNVQVIHFDKEICSSDRLQIGGRLKELGDLVESRMEKLN 299
Query: 265 NGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAE----VVAEIGKLVARFGGGG 320
G+ILD+GDLKWLV Q + G SGT+QQQ V++E V E+GKL+A++G GG
Sbjct: 300 GSGGIILDMGDLKWLVHQPPATGGGSGSGTVQQQ--VVSEGGRAAVMEMGKLLAKYGNGG 357
Query: 321 G-RLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVE 379
G RLWLIGTATCETYLRCQVYH SMENDWDLQAVPIAA+ PL G+FPRLG+ GIL+S VE
Sbjct: 358 GSRLWLIGTATCETYLRCQVYHASMENDWDLQAVPIAARAPLPGLFPRLGTTGILNSPVE 417
Query: 380 SLSPLKSAFQTTAAALPRR--VSENLDPARRMSCCRQCLQNYEQELAKL-SKEFEKSSSE 436
SLS +K T + +P R + ENLD +R+ SCC QC+QNYE+EL K + E +K SS
Sbjct: 418 SLSSIKGF--PTISTIPMRPLMHENLDSSRKSSCCSQCMQNYERELEKFVANELDKPSSV 475
Query: 437 VKSEVARP-LLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHP 495
K E A+ LP WL NAKA D D K E T+N D++L+ KQK+QELQKKW DTCL HP
Sbjct: 476 TKPEGAKASALPPWLQNAKAQDEDAKKHETTDNLDKELMRKQKAQELQKKWQDTCLRLHP 535
Query: 496 NFHP-SSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSN-MVSSQP 553
NFH + G ER PV L +TGLY+ NLL QP QPK+QLN+ G+TLQL +N +++S+P
Sbjct: 536 NFHNLNKFGLERTAPVSLPLTGLYSPNLLGHQPSQPKLQLNKGFGETLQLKTNPLLASKP 595
Query: 554 AERAVSPL--NSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQND 611
+E+ S L SPVRT+L LGR E E+TH E VKD LGCISS P +NK+ E ++
Sbjct: 596 SEKVASILRPGSPVRTELALGRKNDSEILAEETHKERVKDLLGCISSGP-ENKVCELRSS 654
Query: 612 QLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFM 671
+ + D DS+KRLLK ++EKVWWQQEAASA+AT+VTQ KLGNGKRRG KGDMWLLF+
Sbjct: 655 KFIETSDIDSYKRLLKGILEKVWWQQEAASALATSVTQFKLGNGKRRGTVPKGDMWLLFL 714
Query: 672 GPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE-EPEVRVRGKTALDKIGEAVKRNPF 730
GPDRVGKKKMA+AL+ELVSG++PI I LG +R + E E+ +RG+T LD+I EA++RN F
Sbjct: 715 GPDRVGKKKMATALAELVSGSNPITICLGSKRKSDGESEISIRGRTVLDRISEAIRRNRF 774
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQG 790
SVI+L+D DE+D++VRG+I+RAMERGR DS+GREISLGN+IFILTA W+PD +K LS G
Sbjct: 775 SVIVLDDFDESDLLVRGSIRRAMERGRFTDSHGREISLGNIIFILTATWIPDDMKHLSNG 834
Query: 791 ITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGLSFDLNKAAD 850
L+E+K LA WQL+LS+ +T KRRA W EER KPR ETGS ++FDLN+ AD
Sbjct: 835 NMLEEEKFAGLARRTWQLKLSVSEQTVKRRAEWAQGEERCLKPRLETGSAIAFDLNECAD 894
Query: 851 VGDDK-DGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRI 909
D+K DGS NSSD+T DHE EHG R L + +T++ S+++LN+VD AIVFKPVDF I
Sbjct: 895 AEDEKTDGSLNSSDVTTDHETEHGLNTRQL-SFTTASASREMLNTVDDAIVFKPVDFSPI 953
Query: 910 RRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGRTGLEDWTEKVLVPSLHQLKL 969
+ +T++I KKFSSI+G+ +S+E+ + A+EK+ GVWLG T +E+WTE LVPSL +LK
Sbjct: 954 KHSITSSIKKKFSSIVGEKMSLELQENAVEKITSGVWLGNTNVEEWTENFLVPSLKELKA 1013
Query: 970 RLPNNATAATDESATVRLELDDGSGSRSHGELLPSSIRVVV 1010
RLP TA ES V+LE D G RS LP SI+V+V
Sbjct: 1014 RLP---TANAFESMVVKLESDADLGCRSSEGQLPCSIKVIV 1051
>gi|449465230|ref|XP_004150331.1| PREDICTED: uncharacterized protein LOC101218254 [Cucumis sativus]
Length = 1055
Score = 1225 bits (3169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/1061 (61%), Positives = 791/1061 (74%), Gaps = 61/1061 (5%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAGLSTIQQTLTPEAASVLNHSIAEA RRNHGQTTPLHVAATLL+SP+G+LRQACIKSH
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLSSPTGFLRQACIKSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQ 120
PNSSHPLQCRALELCFSVALERLPTAQ N SPG +PPISNALMAALKRAQAHQRRGCPEQ
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTAQ-NASPGAEPPISNALMAALKRAQAHQRRGCPEQ 119
Query: 121 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIG 180
QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS+NS S+S G
Sbjct: 120 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSMNSPAPASSSPIGG 179
Query: 181 LGFRPSS----RNLYMNPRLQQAGGVCG---------------------------GQSEP 209
LGFRPS RNLY+NPRLQQ G V G+SEP
Sbjct: 180 LGFRPSPVGPPRNLYLNPRLQQQGSVAPPVQQRGEEVRKVFDILLRSKKRNPVLVGESEP 239
Query: 210 EMVVRESLAKIESKEL-DGVLKNVQIIRLDKDF-TCDKAGIVSKLKDLGALIET---KFG 264
E VV+E L +IE++EL DG L NVQ+I DK+ + D+ I +LK+LG L+E+ K
Sbjct: 240 EAVVKELLRRIENRELGDGTLGNVQVIHFDKEICSSDRLQIGGRLKELGDLVESRMEKLN 299
Query: 265 NGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAE----VVAEIGKLVARFGGGG 320
G+ILD+GDLKWLV Q + G SGT+QQQ V++E V E+GKL+A++G GG
Sbjct: 300 GSGGIILDMGDLKWLVHQPPATGGGSGSGTVQQQ--VVSEGGRAAVMEMGKLLAKYGNGG 357
Query: 321 G-RLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVE 379
G RLWLIGTATCETYLRCQVYH SMENDWDLQAVPIAA+ PL G+FPRLG+ GIL+S VE
Sbjct: 358 GSRLWLIGTATCETYLRCQVYHASMENDWDLQAVPIAARAPLPGLFPRLGTTGILNSPVE 417
Query: 380 SLSPLKSAFQTTAAALPRR--VSENLDPARRMSCCRQCLQNYEQELAKL-SKEFEKSSSE 436
SLS +K T + +P R + ENLD +R+ SCC QC+QNYE+EL K + E +K SS
Sbjct: 418 SLSSIKGF--PTISTIPMRPLMHENLDSSRKSSCCSQCMQNYERELEKFVANELDKPSSV 475
Query: 437 VKSEVARP-LLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHP 495
K E A+ LP WL NAKA D D K E T+N D++L+ KQK+QELQKKW DTCL HP
Sbjct: 476 TKPEGAKASALPPWLQNAKAQDEDAKKHETTDNLDKELMRKQKAQELQKKWQDTCLRLHP 535
Query: 496 NFHP-SSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSN-MVSSQP 553
NFH + G ER PV L +TGLY+ NLL QP QPK+QLN+ G+TLQL +N +++S+P
Sbjct: 536 NFHNLNKFGLERTAPVSLPLTGLYSPNLLGHQPSQPKLQLNKGFGETLQLKTNPLLASKP 595
Query: 554 AERAVSPL--NSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQND 611
+E+ S L SPVRT+L LGR E E+TH E VKD LGCISS P +NK+ E ++
Sbjct: 596 SEKVASILRPGSPVRTELALGRKNDSEILAEETHKERVKDLLGCISSGP-ENKVCELRSS 654
Query: 612 QLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFM 671
+ + D DS+KRLLK ++EKVWWQQEAASA+AT+VTQ KLGNGKRRG KGDMWLLF+
Sbjct: 655 KFIETSDIDSYKRLLKGILEKVWWQQEAASALATSVTQFKLGNGKRRGTVPKGDMWLLFL 714
Query: 672 GPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE-EPEVRVRGKTALDKIGEAVKRNPF 730
GPDRVGKKKMA+AL+ELVSG++PI I LG +R + E E+ +RG+T LD+I EA++RN F
Sbjct: 715 GPDRVGKKKMATALAELVSGSNPITICLGSKRKSDGESEISIRGRTVLDRISEAIRRNRF 774
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQG 790
SVI+L+D DE+D++VRG+I+RAMERGR DS+GREISLGN+IFILTA W+PD +K LS G
Sbjct: 775 SVIVLDDFDESDLLVRGSIRRAMERGRFTDSHGREISLGNIIFILTATWIPDDMKHLSNG 834
Query: 791 ITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGLSFDLNKAAD 850
L+E+K LA WQL+LS+ +T KRRA W EER KPR E+GS ++FDLN+ AD
Sbjct: 835 NMLEEEKFAGLARRTWQLKLSVSEQTVKRRAEWAQGEERCLKPRLESGSAIAFDLNECAD 894
Query: 851 VGDDK-DGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRI 909
D+K DGS NSSD+T DHE EHG R L + +T++ S+++LN+VD AIVFKPVDF I
Sbjct: 895 AEDEKTDGSLNSSDVTTDHETEHGLNTRQL-SFTTASASREMLNTVDDAIVFKPVDFSPI 953
Query: 910 RRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGRTGLEDWTEKVLVPSLHQLKL 969
+ +T++I KKFSSI+G+ +S+E+ + A+EK+ GVWLG T +E+WTE LVPSL +LK
Sbjct: 954 KHSITSSIKKKFSSIVGEKMSLELQENAVEKITSGVWLGNTNVEEWTENFLVPSLKELKA 1013
Query: 970 RLPNNATAATDESATVRLELDDGSGSRSHGELLPSSIRVVV 1010
RLP TA ES V+LE D G RS LP SI+V+V
Sbjct: 1014 RLP---TANAFESMVVKLESDADLGCRSSEGQLPCSIKVIV 1051
>gi|356547789|ref|XP_003542291.1| PREDICTED: uncharacterized protein LOC100785122 [Glycine max]
Length = 1036
Score = 1209 bits (3127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 646/1061 (60%), Positives = 790/1061 (74%), Gaps = 75/1061 (7%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAGLSTIQQTLTPEAASVLNHSIAEA RRNHGQTTPLHVAATLLASPSG+LRQACIKSH
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLASPSGFLRQACIKSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQ 120
PNSSHPLQCRALELCFSVALERLPT+Q N S ++PPISNALMAALKRAQAHQRRG PEQ
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTSQ-NTSSSMEPPISNALMAALKRAQAHQRRGYPEQ 119
Query: 121 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIG 180
QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN+ S NS G
Sbjct: 120 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNAVPSTVNS---G 176
Query: 181 LGFRPSS---------RNLYMNPRL----------QQAGG-----------------VCG 204
LGFRPS+ RNLY+NPRL Q G +
Sbjct: 177 LGFRPSAVAPVNSAPGRNLYLNPRLQQQQQQGSTAQHRGDEVKRILDILLRTKKRNPILV 236
Query: 205 GQSEPEMVVRESLAKIESKEL-DGVLKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKF 263
G+SEPE ++E + KIE+KEL +G N +I L+K+ DKA I ++LK+LG LIET+
Sbjct: 237 GESEPEAAIKEVIKKIENKELGEGAFANAHVIHLEKELPSDKAQIPARLKELGDLIETRI 296
Query: 264 GNGD--GVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEV----VAEIGKLVARFG 317
GN GV +DLGDLKWLVEQ V G +QQ LAE VAE+G+LV++FG
Sbjct: 297 GNSGCGGVFVDLGDLKWLVEQPVGFGIGGGLGNMQQL--TLAEAGRAAVAEMGRLVSKFG 354
Query: 318 -GGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSS 376
GG GRLWL+GTATCETYLRCQVYHP+MENDWDLQAVPI + L G+FPRLG+NG L +
Sbjct: 355 EGGAGRLWLLGTATCETYLRCQVYHPTMENDWDLQAVPITTRASLPGIFPRLGTNGFLGT 414
Query: 377 SVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSE 436
S+ESLSPLK+ TT L RR SEN+DPA CC QC+Q+ EQE+A++ KE EKS +E
Sbjct: 415 SLESLSPLKTLSTTTIPPL-RRASENVDPAAVSICCPQCMQSCEQEVAEMLKETEKSDTE 473
Query: 437 VKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPN 496
+KSE A+P LPQWL NAK + + K +Q +N++ ++ K+++QE+QKKW+D+CL+ HP
Sbjct: 474 LKSEAAKPSLPQWLQNAKTNKDNGKVMDQAQNQEVNV--KKRTQEIQKKWHDSCLSLHPK 531
Query: 497 FHPSSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAER 556
FH ++ ER+VP LSMTGLYN NLL RQ FQPK+ LN+NLG +LQL+SN P+E
Sbjct: 532 FHQLNVSTERLVPTSLSMTGLYNMNLLGRQ-FQPKIPLNKNLGTSLQLSSNPTPIHPSEH 590
Query: 557 AVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKP 616
VSP PV TDLVLG++K ++ PE+TH E + DFL C+SSE Q+K E Q+ +L
Sbjct: 591 VVSPQQIPVTTDLVLGQTKPADATPEETHKEGINDFLSCLSSES-QDKFDELQSKKL--- 646
Query: 617 LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRV 676
LD DSFK+LLK L EKVWWQQ+AASAVATTVTQCKLGNGKRR SKGD WLLF+GPDR+
Sbjct: 647 LDADSFKKLLKGLTEKVWWQQDAASAVATTVTQCKLGNGKRR---SKGDTWLLFVGPDRI 703
Query: 677 GKKKMASALSELVSGAS-PIMIPLGPRR-DHEEPEVRVRGKTALDKIGEAVKRNPFSVIL 734
GKKKMA+ALSELVSG++ PI+IPL RR D + +RGKTALD+I EA++RNP SVI+
Sbjct: 704 GKKKMAAALSELVSGSTNPIIIPLAQRRADGDSDAPHLRGKTALDRIAEAIRRNPLSVIV 763
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLD 794
LEDIDEA++++RG+I+RAME+GR DS+GREISLGNV+FILTA+WLP+ + LS G LD
Sbjct: 764 LEDIDEANILLRGSIRRAMEQGRFPDSHGREISLGNVMFILTANWLPEDFRCLSNGSPLD 823
Query: 795 EKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGLSFDLNKAADVGDD 854
E+KL +LA G WQLR+S+ + +KRR SWL +E+RS KPRKE SGLSFDLN+AAD +D
Sbjct: 824 EEKLENLAKGGWQLRISVGKRASKRRPSWLSDEDRSLKPRKEVNSGLSFDLNEAADDAED 883
Query: 855 --KDGSHNSSDLTVDHEE-EHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRR 911
DGS NSSD TV+HE+ H L P ++LL+SVD AIVFKP++F +RR
Sbjct: 884 GRGDGSLNSSDFTVEHEDNNHDVGGSLSAVP------RELLDSVDDAIVFKPLNFDLLRR 937
Query: 912 DVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGRTGLEDWTEKVLVPSLHQLKLRL 971
+ +++I K+FS+++G+ +SIE+ EAL+K+ GVWLG+T +++W +K LVPS HQLK L
Sbjct: 938 NFSSSIIKRFSAVVGNGVSIEVQGEALDKITSGVWLGQTTIDEWMDKALVPSFHQLKKNL 997
Query: 972 PNNATAATDESATVRLELDDGSGSR-SHGELLPSSIRVVVE 1011
N+ T + S RLE DDG R E LP+++RVV E
Sbjct: 998 -NSTTHDHNSSMLFRLE-DDGYSDRWGSQEWLPATVRVVGE 1036
>gi|356562493|ref|XP_003549505.1| PREDICTED: uncharacterized protein LOC100809965 [Glycine max]
Length = 1034
Score = 1196 bits (3093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/1060 (60%), Positives = 789/1060 (74%), Gaps = 75/1060 (7%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAGLSTIQQTLTPEAASVLNHSIAEA RRNHGQTTPLHVAATLLASPSG+LRQACIKSH
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLASPSGFLRQACIKSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQ 120
PNSSHPLQCRALELCFSVALERLPT+Q N ++PPISNALMAALKRAQAHQRRG PEQ
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTSQ-NTGSSMEPPISNALMAALKRAQAHQRRGYPEQ 119
Query: 121 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIG 180
QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN+ + NS G
Sbjct: 120 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNAVPATVNS---G 176
Query: 181 LGFRPSS---------RNLYMNPRLQQAGG------------------------VCGGQS 207
LGFRPS+ RNLY+NPRLQQ G + G+S
Sbjct: 177 LGFRPSAVAPVNSAPGRNLYLNPRLQQQGSAAQHRGDEVKRILDILHRTKKRNPILVGES 236
Query: 208 EPEMVVRESLAKIESKEL-DGVLKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKFGNG 266
EPE ++E + KIE+KEL +G N +I L+K+ DKA I ++L++LG LIE++ GN
Sbjct: 237 EPEAAIKEVIKKIENKELGEGGFANAHVIHLEKELPSDKAQIPARLQELGDLIESRIGNS 296
Query: 267 D--GVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEV----VAEIGKLVARFG-GG 319
GV +DLGDLKWLVEQ V G +QQ LAE VAEIG+LV++FG GG
Sbjct: 297 GCGGVFVDLGDLKWLVEQPVGFGVGGGLGNMQQL--TLAEAGRAAVAEIGRLVSKFGEGG 354
Query: 320 GGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVE 379
GRLWL+GTATCETYLRCQVYHP+MENDWDLQAVPI ++ PL G+FPRLG+NGIL +S+E
Sbjct: 355 AGRLWLLGTATCETYLRCQVYHPTMENDWDLQAVPITSRAPLPGIFPRLGTNGILGTSLE 414
Query: 380 SLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKS 439
SL PLK+ TT +L RR SEN+DP+ CC QC+Q+ EQE+A++ +E +KS +E+KS
Sbjct: 415 SLLPLKTLSTTTIPSL-RRASENIDPSAVSICCPQCMQSCEQEVAEMLEETKKSDTELKS 473
Query: 440 EVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHP 499
E A+P LPQWL NAK ++ + K +Q +N++ ++ K++++E+QKKW+D+CL+ HP FH
Sbjct: 474 EAAKPSLPQWLQNAKTNNDNGKVMDQAQNQEVNV--KKRTKEIQKKWHDSCLSLHPKFHQ 531
Query: 500 SSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVS 559
++ E +VP PLSMTGLYN NLL RQ FQPK+ N+NLG +LQL+SN P E AVS
Sbjct: 532 LNVSTETLVPTPLSMTGLYNMNLLGRQ-FQPKILRNKNLGTSLQLSSNPTPIHPPEHAVS 590
Query: 560 PLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDP 619
P PV TDLVLG++K ++ PE+TH E + DFL C+SSE Q+K E Q+ +L +D
Sbjct: 591 PKQMPVTTDLVLGQTKPADAVPEETHKEGINDFLSCLSSES-QDKFDELQSKKL---IDA 646
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKK 679
DSFK+LLK L EKVWWQQ+AASAVA+TVTQCKLGNGKRR SKGD WLLF+GPDR+GKK
Sbjct: 647 DSFKKLLKGLTEKVWWQQDAASAVASTVTQCKLGNGKRR---SKGDTWLLFVGPDRIGKK 703
Query: 680 KMASALSELVSGASPIMIPLGPRR----DHEEPEVRVRGKTALDKIGEAVKRNPFSVILL 735
KMA+ALSEL SG++PI+IPL RR D + P +R GKTALD+I EA++RNP SVI+L
Sbjct: 704 KMAAALSELASGSNPIIIPLAQRRGDAGDSDAPHLR--GKTALDRIAEAIRRNPLSVIVL 761
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDE 795
EDIDEA++++RG+I+RAME+GR DS+GREISLGNV+FILTA+WLP+ + LS LDE
Sbjct: 762 EDIDEANILLRGSIRRAMEQGRFPDSHGREISLGNVMFILTANWLPEDFRCLSNESLLDE 821
Query: 796 KKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGLSFDLNKAADVGDDK 855
+KL +LA G WQLR+S + +KRR SWL +E+RS KPRKE SG+SFDLN+AA +
Sbjct: 822 EKLENLAKGGWQLRISAGKRASKRRPSWLSDEDRSLKPRKEVNSGVSFDLNEAAADAAED 881
Query: 856 ---DGSHNSSDLTVDHEEE-HGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRR 911
DGS NSSD TV+HE+ H L P ++LL+SVD AIVFKP++F +RR
Sbjct: 882 DRGDGSLNSSDFTVEHEDNYHDVGGSLSAVP------RELLDSVDDAIVFKPLNFDLLRR 935
Query: 912 DVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGRTGLEDWTEKVLVPSLHQLKLRL 971
+ +++I K+FSS++G+ +SIE+ EAL+K+ GVWLG+T +++W +KVLVP HQLK L
Sbjct: 936 NFSSSIAKRFSSVVGNGVSIEVQGEALDKITSGVWLGQTTIDEWMDKVLVPCFHQLKKNL 995
Query: 972 PNNATAATDESATVRLELDDGSGSRSHGELLPSSIRVVVE 1011
N++T D S RLE D S R E LP+++RVV E
Sbjct: 996 -NSSTHDHDSSMLFRLEDDGYSDRRGSQEWLPATVRVVGE 1034
>gi|357479855|ref|XP_003610213.1| Chaperone protein clpB [Medicago truncatula]
gi|355511268|gb|AES92410.1| Chaperone protein clpB [Medicago truncatula]
Length = 1025
Score = 1166 bits (3017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/1064 (59%), Positives = 769/1064 (72%), Gaps = 92/1064 (8%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAGLSTIQQTLTPEAASVLNHSIAEA RRNHGQTTPLHVAATLLASPSGYLRQACIKSH
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVS-PGLDPPISNALMAALKRAQAHQRRGCPE 119
PNSSHPLQCRALELCFSVALERLPT+Q S ++PPISNALMAALKRAQAHQRRG PE
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTSQNASSTSAMEPPISNALMAALKRAQAHQRRGYPE 120
Query: 120 QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNS---SCSVSNS 176
QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNS S NS
Sbjct: 121 QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSVAPSPVTVNS 180
Query: 177 SPIGLGFRPS--------SRNLYMNPRLQQAGG--------------------------- 201
+P+ +GFRP +RNLYMNPRLQQ GG
Sbjct: 181 NPM-MGFRPGMVTPGAAPTRNLYMNPRLQQQGGAAALSGAHKGDEVKRVVEILMRTKKRN 239
Query: 202 -VCGGQSEPEMVVRESLAKIESKEL-DGVLKNVQIIRLDKDFTCDKAGIVSKLKDLGALI 259
V G+SEPE +RE L KIE+KEL +GV N I L+K+ D+ I ++K+LG LI
Sbjct: 240 PVLVGESEPEAAIREVLKKIENKELGEGVFSNAHAIYLEKELPSDRGQIPVRIKELGDLI 299
Query: 260 ETKFGNGD---GVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEV----VAEIGKL 312
E++ GN GV ++LGDLKWLVEQ V FG+ N QQ LAE VAE+G+L
Sbjct: 300 ESRLGNSGSCGGVFINLGDLKWLVEQPV-GFGLGN-----MQQPALAEAGRAAVAEMGRL 353
Query: 313 VARFGGGG-GRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSN 371
VA+FG GG G+LWL+GTATCETYLRCQVYHPSMENDWDLQAVPI ++PL GMFPRLG+N
Sbjct: 354 VAKFGEGGVGKLWLLGTATCETYLRCQVYHPSMENDWDLQAVPITTRSPLPGMFPRLGTN 413
Query: 372 GILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRM--SCCRQCLQNYEQELAKLSKE 429
GIL +++ESLSPLK+ T L R SEN+DPA +CC QC+++ EQE+A + KE
Sbjct: 414 GILGTTLESLSPLKTLTPTPITPL-TRASENVDPAAAAAPTCCPQCMRSCEQEIADMLKE 472
Query: 430 FEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDT 489
EKS SE+K + RP LPQWL NA+ ++ + K +Q ++ Q+ K+++QE+QKKW+D+
Sbjct: 473 TEKSDSELKPDATRPPLPQWLQNARTNNDNAKVMDQAQSNGQEGNVKKRTQEIQKKWHDS 532
Query: 490 CLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMV 549
CLN HP FH ++ ERIVP P SMT LYN NLL RQ FQPKVQ N+NLG +LQL+S +
Sbjct: 533 CLNLHPKFHQQNVSTERIVPTPFSMTNLYNVNLLGRQ-FQPKVQPNKNLGCSLQLSSIPI 591
Query: 550 SSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQ 609
Q +E SP S V T+LVLG++K ++ PE++H E + DFL +SSE Q+K E
Sbjct: 592 PIQQSEHTASPRKSTVTTELVLGQTKPSDTIPEESHRERINDFLSSLSSES-QDKFDELH 650
Query: 610 NDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLL 669
+ +L D DSFKRLLK+L EKVWWQQ+AASA+AT VTQCKLG
Sbjct: 651 SKKL---FDTDSFKRLLKTLTEKVWWQQDAASAIATAVTQCKLG---------------- 691
Query: 670 FMGPDRVGKKKMASALSELVSGASPIMIPLGPRR-DHEEPEVRVRGKTALDKIGEAVKRN 728
PDR+GKK+MA+ALSELVSG++PI+I L RR D + + RGKT LD+I E ++RN
Sbjct: 692 ---PDRIGKKRMAAALSELVSGSNPIVISLAQRRGDGDSNAHQFRGKTVLDRIVETIRRN 748
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLS 788
P SVI+LEDIDEA+ ++RGNIKRAME+GR DS+GREISLGNV+FILT++WLP+ L +LS
Sbjct: 749 PHSVIMLEDIDEANTLLRGNIKRAMEQGRFPDSHGREISLGNVMFILTSNWLPEDLSYLS 808
Query: 789 QGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGLSFDLNKA 848
G LD++KL +LASG WQLRLS+ K +KRR SWL EERS KPRKE GLSFDLN+A
Sbjct: 809 NGAPLDDEKLENLASGGWQLRLSVTKKVSKRRPSWLSNEERSLKPRKELNLGLSFDLNEA 868
Query: 849 ADVGDDK-DGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFG 907
ADV +D+ DGSHNSSD TVDHEE + S S P ++LL+SVD AIVFKP++F
Sbjct: 869 ADVEEDRADGSHNSSDFTVDHEENNHNGG------SPSKP-RELLDSVDDAIVFKPLNFD 921
Query: 908 RIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGRTGLEDWTEKVLVPSLHQL 967
IR++ + +I K+FS+++G+ +SIE+ +EAL+K+ GVWLG+T +++W EKVLVPS HQL
Sbjct: 922 LIRQNFSASIAKRFSAVVGNGISIEVQEEALDKITSGVWLGQTTIDEWMEKVLVPSFHQL 981
Query: 968 KLRLPNNATAATDESATVRLELDDGSGSRSHGELLPSSIRVVVE 1011
++ + S VRLE D S RS ELLP+S+RV E
Sbjct: 982 NKSYNSSNLDEHESSLLVRLEDDGYSDRRSSQELLPASVRVAAE 1025
>gi|255584936|ref|XP_002533182.1| ATP binding protein, putative [Ricinus communis]
gi|223527016|gb|EEF29205.1| ATP binding protein, putative [Ricinus communis]
Length = 983
Score = 1120 bits (2898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/996 (61%), Positives = 728/996 (73%), Gaps = 98/996 (9%)
Query: 103 MAALKRAQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKAT 162
MAALKRAQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKAT
Sbjct: 1 MAALKRAQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKAT 60
Query: 163 IEQSLNSSCSVSNSSP----------------IGLGFRP--------------SSRNLYM 192
IEQSL+ + S ++SS G GFR ++RNLY+
Sbjct: 61 IEQSLSMNSSSNSSSGAGGGGGGGCGVSNSSSFGFGFRTPGAVMQVPVPGHATANRNLYV 120
Query: 193 NPRLQQA--------------------------GGVCGGQSEPEMVVRESLAKIESKEL- 225
NPRLQQ V G+SEPEMVV+E L +IE+KE+
Sbjct: 121 NPRLQQGSVAQSGQQRNEEVKRVVDILLKNKKRNPVLVGESEPEMVVKELLKRIENKEIG 180
Query: 226 DGVLKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKFGNGD--GVILDLGDLKWLVEQQ 283
+G+LKNV +I L+KDF DKA I SK+ +LG IET+ G+ D GVILDLGDLKWLVEQ
Sbjct: 181 EGLLKNVHVIHLEKDF-LDKAQISSKIVELGDSIETRIGDLDCGGVILDLGDLKWLVEQA 239
Query: 284 VTSFGVPNSGTLQQQQQVLAEV----VAEIGKLVARFGG-GGGRLWLIGTATCETYLRCQ 338
V+ P + +QQQQQ++++ V+E+GKL+ RFG GR+WLIGTATCETYLRCQ
Sbjct: 240 VS---FPATAGVQQQQQIVSDAGKVAVSEMGKLLTRFGERSNGRVWLIGTATCETYLRCQ 296
Query: 339 VYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRR 398
VYHPSMENDWDLQAVPIA + PL GMFPRLG NGILSSSVESLSPLK F T AL RR
Sbjct: 297 VYHPSMENDWDLQAVPIAPRAPLPGMFPRLGPNGILSSSVESLSPLK-GFPTVTPALLRR 355
Query: 399 VSENLDPARRMSCCRQCLQNYEQELAKLS-KEFEKSSSEVKSEVARPLLPQWLHNAKAHD 457
+EN DPARR SCC QC+Q+YEQELAK++ KE E+SSSE+KSE + LLPQWL NAK+ D
Sbjct: 356 PTENFDPARRTSCCPQCMQSYEQELAKITPKESERSSSELKSEATQTLLPQWLKNAKSQD 415
Query: 458 GDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGL 517
D K+ +QT KDQ+L+ KQKS ELQKKW+DTCL HP +H ++ ERI LSMT L
Sbjct: 416 IDTKSFDQTATKDQELMSKQKSVELQKKWHDTCLRLHPGYHQPNVVSERITQPALSMTNL 475
Query: 518 YNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVS-------------------SQPAERAV 558
YN NL ARQPFQPK+ LNRNLG T QLNS + SQ +AV
Sbjct: 476 YNPNLHARQPFQPKLGLNRNLGGTPQLNSKICGTPQLNPQLNSTIDRSPQSPSQSHGQAV 535
Query: 559 SPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLD 618
+P SPVRTDLVLG++K E+ PE H E KDFLG ++SEP Q KL E Q +L LD
Sbjct: 536 TPPGSPVRTDLVLGQAKSKENTPEIGHGERTKDFLGRVASEP-QPKLTELQAIKLLNALD 594
Query: 619 PDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGK 678
DSFKRLL+ L+EKVWWQ++AASAVATTVT+CKLGNGK+RG SKGD+WLLF GPDRVGK
Sbjct: 595 ADSFKRLLRGLLEKVWWQRDAASAVATTVTRCKLGNGKQRGNSSKGDIWLLFTGPDRVGK 654
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDI 738
KKMA ALS+LV G++PIM+ LG RD E +V RGKTA+D+I EAV+RNPFSVI+LEDI
Sbjct: 655 KKMALALSDLVYGSNPIMVSLGSCRDDRESDVNFRGKTAVDRIVEAVRRNPFSVIMLEDI 714
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKL 798
DEADM+VRG+IKRAMERGRL DS+GREISLGNVIFILTA+WLPD+LKFLS G +LDE KL
Sbjct: 715 DEADMIVRGSIKRAMERGRLSDSHGREISLGNVIFILTANWLPDNLKFLSNGTSLDETKL 774
Query: 799 TSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGLSFDLNKAADVGDDK-DG 857
SL SG WQLRLS+ KT KRRASWL +E R KPRK+ SGLSFDLN+AAD +DK DG
Sbjct: 775 ASLVSGGWQLRLSLCEKTAKRRASWLHDEVRPAKPRKD--SGLSFDLNEAADAEEDKADG 832
Query: 858 SHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAI 917
S NSSDLT+DHE+E NRLL TP+TS+ S++LL SVD IVFK VD G +R +++N++
Sbjct: 833 SRNSSDLTIDHEDEQSLNNRLL-TPTTSSVSRELLKSVDDNIVFKSVDLGSLRSEISNSV 891
Query: 918 TKKFSSIIGDALSIEILDEALEKLVGGVWLGRTGLEDWTEKVLVPSLHQLKLRLPNNATA 977
TKKFS+II + S++I D+ALEK+ G+WL R LE+WTE+ LVPS+ QLKL+LP
Sbjct: 892 TKKFSTIISEGFSLDIQDDALEKIAAGLWLSRGSLEEWTEEALVPSIRQLKLKLPTYG-- 949
Query: 978 ATDESATVRLELDDGSGSRSHGELLPSSIRVVVEGL 1013
+ES +RLE D SGSRS G+ LPSSIRV V+GL
Sbjct: 950 --EESRVIRLEPDGDSGSRSDGDWLPSSIRVAVDGL 983
>gi|449464332|ref|XP_004149883.1| PREDICTED: uncharacterized protein LOC101218882 [Cucumis sativus]
Length = 1029
Score = 1045 bits (2703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 570/1054 (54%), Positives = 733/1054 (69%), Gaps = 66/1054 (6%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAGL TI QTLT +AA++LN +IAEA+RRNHGQTTP+HVAATLLASP+ +LRQACIKSH
Sbjct: 1 MRAGLGTILQTLTSDAATILNQAIAEAARRNHGQTTPVHVAATLLASPTAFLRQACIKSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQ 120
PNSSHPLQCRALELCFSVALERLPTAQ N+S +PPISNALMAALKRAQAHQRRG E
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTAQ-NLSAASEPPISNALMAALKRAQAHQRRGSSEL 119
Query: 121 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIG 180
QQPLLAVKVE EQL+ISILDDPSVSR+MREASFSSPAVK IE+SLNSS SV NSSPIG
Sbjct: 120 PQQPLLAVKVEFEQLVISILDDPSVSRIMREASFSSPAVKGIIERSLNSSASVVNSSPIG 179
Query: 181 LGFRPSS----RNLYMNPRLQQA--------------------------GGVCGGQSEPE 210
L SS R+LY+NPR Q + G SE +
Sbjct: 180 LRSSHSSPSPNRSLYLNPRFHQGSVNQLGRPREEEVKRIVDILRRPTKRNPIVVGDSETD 239
Query: 211 MVVRESLAKIESKEL-DGVLKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKFGNGDG- 268
++ E +I KEL +G L+N +IIRL+K+F D+ I +KL +L L+ ++
Sbjct: 240 AMLEEFFRRINKKELSEGSLENAEIIRLEKEFASDREQIPTKLDELEDLVASQLAKSSSG 299
Query: 269 -VILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIG 327
+ILDLG+L+WL +Q +S +Q+ IGKL+ RF G RLWLIG
Sbjct: 300 SIILDLGNLEWLFDQPASSVSEAGRAAVQK-----------IGKLLTRFNG---RLWLIG 345
Query: 328 TATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSA 387
TATCET+LRCQ+YHPS+E+DWDL VP+ AK P SG++PR G+ IL S +ESLSPLK
Sbjct: 346 TATCETFLRCQIYHPSIESDWDLHVVPVVAKAPRSGLYPRFGTKEILGSPIESLSPLK-F 404
Query: 388 FQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKL-SKEFEKSSSEVKSEVARPLL 446
F T + R SE+L+ R++CC QC+Q YEQEL KL ++E EKSSS VK++ L
Sbjct: 405 FPTPPISQLRNESESLNYGSRITCCSQCMQKYEQELHKLINEESEKSSSGVKTDSNSSPL 464
Query: 447 PQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSL-GHE 505
P WL AK H + ++ + +NKD +L+ KQ++QELQKKWN TCL HPNFH S +
Sbjct: 465 PHWLQKAKDHSPNAESVDSKQNKDTELMVKQRTQELQKKWNTTCLQIHPNFHQSKIFSST 524
Query: 506 RIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVSPLNSPV 565
+ +S GLYN NLL QP QP+++LN++LG TLQLN N +QP++ ++ +
Sbjct: 525 GNMLTGISTMGLYNQNLLKCQPCQPRLELNKSLGRTLQLNMNPQPNQPSD------HNSI 578
Query: 566 RTDLVLGRSKVLESAPEKTHIEPVKDFLG-CISSEPPQNKLHESQNDQLQKPLDPDSFKR 624
RTDL+LG+ K + PE+T + +FLG +S + K + Q+ +L D DS+K+
Sbjct: 579 RTDLILGQEKFSGNIPEQTRKDCTIEFLGQNHNSSKSEMKSLDIQSAKLLGITDVDSYKK 638
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
+LK LM KVWWQ++AAS VA T+TQ KLGN KR+GAGSKGD+WLLF GPD+VGK+KMASA
Sbjct: 639 ILKVLMGKVWWQRDAASTVANTITQRKLGNRKRQGAGSKGDIWLLFAGPDKVGKRKMASA 698
Query: 685 LSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMV 744
+SELVSG+ + I LG +R+ + RG+T LD+I EAV++NPFSVI+LE+IDEAD++
Sbjct: 699 ISELVSGSIMVTICLGSQRNGRGLDNNFRGRTPLDQIAEAVRKNPFSVIVLENIDEADVL 758
Query: 745 VRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASG 804
RG++KRA+E GRL+DSYGREISLGN+IFILT WLPD LK+ S + EK+L +LA
Sbjct: 759 FRGSLKRAIESGRLIDSYGREISLGNIIFILTTVWLPDDLKWFSDHNSFGEKELATLAGE 818
Query: 805 EWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGLSFDLNKAADVGDDK-DGSHNSSD 863
WQLRLS+ K +KRR +WL EER TK RK T GL FDLN+AA+ DD DGSHNSSD
Sbjct: 819 SWQLRLSLSEKQSKRRGNWLCNEERFTKTRKGTNPGLFFDLNEAANAEDDTPDGSHNSSD 878
Query: 864 LTVDHEEEHGFTNRLLMTPSTSTPS-QDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFS 922
LT+DHE+E+G + M +T++P+ +L + VD AI+FKPV+F I +D+ +I +KF
Sbjct: 879 LTIDHEDEYGLSK---MESTTASPALTELQDIVDDAIIFKPVNFNHITQDIKTSINEKFF 935
Query: 923 SIIG-DALSIEILDEALEKLVGGVWLGRTGLEDWTEKVLVPSLHQLKLRLPNNATAATDE 981
+IIG + +SIE+ D+AL+K++ GVWL T LE+W EK LVPS + LK P + D
Sbjct: 936 TIIGVEGISIELQDQALQKILAGVWLSNTSLEEWAEKALVPSFNHLKACFPKTTGSTRDN 995
Query: 982 SATVRLELDDGSGSRSHGELLPSSIRVV--VEGL 1013
V LELD SG+R+ G+ LPS+I+VV V+GL
Sbjct: 996 PIVVTLELDRESGNRNRGDWLPSNIKVVTAVDGL 1029
>gi|449529860|ref|XP_004171916.1| PREDICTED: uncharacterized protein LOC101223687 [Cucumis sativus]
Length = 1029
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/1054 (53%), Positives = 732/1054 (69%), Gaps = 66/1054 (6%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAGL TI QTLT +AA++LN +IAEA+RRNHGQTTP+HVAATLLASP+ +LRQACIKSH
Sbjct: 1 MRAGLGTILQTLTSDAATILNQAIAEAARRNHGQTTPVHVAATLLASPTAFLRQACIKSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQ 120
PNSSHPLQCRALELCFSVALERLPTAQ N+S +PPISNALMAALKRAQAHQRRG E
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTAQ-NLSAASEPPISNALMAALKRAQAHQRRGSSEL 119
Query: 121 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIG 180
QQPLLAVKVE EQL+ISILDDPSVSR+MREASFSSPAVK IE+SLNSS SV NSSPIG
Sbjct: 120 PQQPLLAVKVEFEQLVISILDDPSVSRIMREASFSSPAVKGIIERSLNSSASVVNSSPIG 179
Query: 181 LGFRPSS----RNLYMNPRLQQA--------------------------GGVCGGQSEPE 210
L SS R+LY+NPR Q + G SE +
Sbjct: 180 LRSSHSSPSPNRSLYLNPRFHQGSVNQLGKPREEEVKRIVDILRRPTKRNPIVVGDSETD 239
Query: 211 MVVRESLAKIESKEL-DGVLKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKFGNGDG- 268
++ E +I KEL +G L+N +IIRL+K+F D+ I +KL +L L+ ++
Sbjct: 240 AMLEEFFRRINKKELSEGSLENAEIIRLEKEFASDREQIPTKLDELEDLVASQLAKSSSG 299
Query: 269 -VILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIG 327
+ILDLG+L+WL +Q +S +Q+ IGKL+ RF G RLWLIG
Sbjct: 300 SIILDLGNLEWLFDQPASSVSEAGRAAVQK-----------IGKLLTRFNG---RLWLIG 345
Query: 328 TATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSA 387
TATCET+LRCQ+YHPS+E+DWDL VP+ AK P SG++PR G+ IL S +ESLSPLK
Sbjct: 346 TATCETFLRCQIYHPSIESDWDLHVVPVVAKAPRSGLYPRFGTKEILGSPIESLSPLK-F 404
Query: 388 FQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKL-SKEFEKSSSEVKSEVARPLL 446
F T + R SE+L+ R++CC QC+Q YEQEL KL ++E EKSS VK++ L
Sbjct: 405 FPTPPISQLRNESESLNYGSRLTCCSQCMQKYEQELHKLINEESEKSSPGVKTDSNSSPL 464
Query: 447 PQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSL-GHE 505
P WL AK H + ++ + +NKD +L+ KQ++QELQKKWN TCL HPNFH S +
Sbjct: 465 PHWLQKAKDHSPNAESVDSKQNKDTELMVKQRTQELQKKWNTTCLQIHPNFHQSKIFSST 524
Query: 506 RIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVSPLNSPV 565
+ +S GLYN NLL QP QP+++LN++LG TLQLN N +QP++ ++ +
Sbjct: 525 GNMLTGISTMGLYNQNLLKCQPCQPRLELNKSLGRTLQLNMNPQPNQPSD------HNSI 578
Query: 566 RTDLVLGRSKVLESAPEKTHIEPVKDFLG-CISSEPPQNKLHESQNDQLQKPLDPDSFKR 624
RTDL+LG+ K + PE+T + +FLG +S + K + Q+ +L D DS+K+
Sbjct: 579 RTDLILGQEKFSGNIPEQTRKDCTIEFLGQNHNSSKSEMKSLDIQSAKLLGITDVDSYKK 638
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
+LK LM KVWWQ++AAS VA T+TQ KLGN KR+GAGSKGD+WLLF GPD+VGK+KMASA
Sbjct: 639 ILKVLMGKVWWQRDAASTVANTITQRKLGNRKRQGAGSKGDIWLLFAGPDKVGKRKMASA 698
Query: 685 LSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMV 744
+SELVSG+ + I LG +R+ + RG+T LD+I EAV++NPFSVI+LE+IDEAD++
Sbjct: 699 ISELVSGSIMVTICLGSQRNGRGLDNNFRGRTPLDQIAEAVRKNPFSVIVLENIDEADVL 758
Query: 745 VRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASG 804
RG++KRA+E GRL+DSYGREISLGN+IFILT WLPD LK+ S + EK+L +LA
Sbjct: 759 FRGSLKRAIESGRLIDSYGREISLGNIIFILTTVWLPDDLKWFSDHNSFGEKELATLAGE 818
Query: 805 EWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGLSFDLNKAADVGDDK-DGSHNSSD 863
WQLRLS+ K +KRR +WL EER TK RK T GL FDLN+AA+ DD DGSHNSSD
Sbjct: 819 SWQLRLSLSEKQSKRRGNWLCNEERFTKTRKGTNPGLLFDLNEAANAEDDTPDGSHNSSD 878
Query: 864 LTVDHEEEHGFTNRLLMTPSTSTPS-QDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFS 922
LT+DHE+E+G + M +T++P+ +L + VD AI+FKPV+F I +D+ +I +KF
Sbjct: 879 LTIDHEDEYGLSK---MESTTASPALTELQDIVDDAIIFKPVNFNHITQDIKTSINEKFF 935
Query: 923 SIIG-DALSIEILDEALEKLVGGVWLGRTGLEDWTEKVLVPSLHQLKLRLPNNATAATDE 981
+IIG + +SIE+ D+AL+K++ GVWL T LE+W EK LVPS + LK P + D
Sbjct: 936 TIIGVEGISIELQDQALQKILAGVWLSNTSLEEWAEKALVPSFNHLKACFPKTTGSTRDN 995
Query: 982 SATVRLELDDGSGSRSHGELLPSSIRVV--VEGL 1013
V LELD SG+R+ G+ LPS+I+VV V+GL
Sbjct: 996 PIVVTLELDRESGNRNRGDWLPSNIKVVTAVDGL 1029
>gi|15242850|ref|NP_200579.1| heat shock protein-like protein [Arabidopsis thaliana]
gi|9759268|dbj|BAB09589.1| 101 kDa heat shock protein; HSP101-like protein [Arabidopsis
thaliana]
gi|332009558|gb|AED96941.1| heat shock protein-like protein [Arabidopsis thaliana]
Length = 990
Score = 1018 bits (2631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/1068 (55%), Positives = 733/1068 (68%), Gaps = 136/1068 (12%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAGLSTIQQTLTPEAA+VLN SIAEA+RRNHGQTTPLHVAATLLASP+G+LR+ACI+SH
Sbjct: 1 MRAGLSTIQQTLTPEAATVLNQSIAEAARRNHGQTTPLHVAATLLASPAGFLRRACIRSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQ 120
PNSSHPLQCRALELCFSVALERLPTA +PG DPPISNALMAALKRAQAHQRRGCPEQ
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTA--TTTPGNDPPISNALMAALKRAQAHQRRGCPEQ 118
Query: 121 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCS---VSNSS 177
QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN+S + + + S
Sbjct: 119 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNNSVTPTPIPSVS 178
Query: 178 PIGLGFRPS-----SRNLYMNPRLQQAGG---------------------------VCGG 205
+GL FRP +RN Y+NPRLQQ V G
Sbjct: 179 SVGLNFRPGGGGPMTRNSYLNPRLQQNASSVQSGVSKNDDVERVMDILGRAKKKNPVLVG 238
Query: 206 QSEPEMVVRESLAKIESKELDGV-LKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKFG 264
SEP V+RE L KIE E+ + +KN +++ L+ + + DKA ++K+L L++T+
Sbjct: 239 DSEPGRVIREILKKIEVGEVGNLAVKNSKVVSLE-EISSDKA---LRIKELDGLLQTRLK 294
Query: 265 NGD-----GVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEV----VAEIGKLVAR 315
N D GVILDLGDLKWLVEQ P+S Q V E+ V E+ +L+ +
Sbjct: 295 NSDPIGGGGVILDLGDLKWLVEQ-------PSS--TQPPATVAVEIGRTAVVELRRLLEK 345
Query: 316 FGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILS 375
F G RLW IGTATCETYLRCQVYHPS+E DWDLQAV +AAK P SG+FPRL +N
Sbjct: 346 FEG---RLWFIGTATCETYLRCQVYHPSVETDWDLQAVSVAAKAPASGVFPRLANN---- 398
Query: 376 SSVESLSPLKSAFQTTAAALPRRVSENLDPARR-MSCCRQCLQNYEQELAKLSKEFEKSS 434
+ES +PLKS PA R + CC QCLQ+YE+ELA++ SS
Sbjct: 399 --LESFTPLKSFV----------------PANRTLKCCPQCLQSYERELAEIDS---VSS 437
Query: 435 SEVKSEVARP-LLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQ 493
EVKSEVA+P LPQWL AK D + + K +E+QKKWND C+
Sbjct: 438 PEVKSEVAQPKQLPQWLLKAKP---------------VDRLPQAKIEEVQKKWNDACVRL 482
Query: 494 HPNFHPSSLGHERIVPVPLSMT---GLYNSNLLARQPFQPKVQLNRNLGDTLQLN--SNM 548
HP+FH +ERIVP+P+ +T Y+ N+L RQP QPK+Q NR L + + L S +
Sbjct: 483 HPSFHNK---NERIVPIPVPITLTTSPYSPNMLLRQPLQPKLQPNRELRERVHLKPMSPL 539
Query: 549 VSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHES 608
V+ Q ++ SP SPV+TDLVLGR++ E A + V+DFLGCISSE QN + S
Sbjct: 540 VAEQAKKK--SPPGSPVQTDLVLGRAEDSEKAGDVQ----VRDFLGCISSESVQNNNNIS 593
Query: 609 --QNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDM 666
Q + L LD D FK+LLK + EKVWWQ +AA+AVA TV+QCKLGNGKRRG SKGD+
Sbjct: 594 VLQKENLGNSLDIDLFKKLLKGMTEKVWWQNDAAAAVAATVSQCKLGNGKRRGVLSKGDV 653
Query: 667 WLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEAVK 726
WLLF GPDRVGK+KM SALS LV G +PIMI LG R+D + RGKTALDKI E VK
Sbjct: 654 WLLFSGPDRVGKRKMVSALSSLVYGTNPIMIQLGSRQDAGDGNSSFRGKTALDKIAETVK 713
Query: 727 RNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK- 785
R+PFSVILLEDIDEADM+VRG+IK+AM+RGR+ DS+GREISLGNVIF++TA W K
Sbjct: 714 RSPFSVILLEDIDEADMLVRGSIKQAMDRGRIRDSHGREISLGNVIFVMTASWHFAGTKT 773
Query: 786 -FLSQGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWL-DEEERSTKPRKETGSGLSF 843
FL +E KL LAS W+LRL +R K KRRASWL +EER TKP+KE GSGLSF
Sbjct: 774 SFLD-----NEAKLRDLASESWRLRLCMREKFGKRRASWLCSDEERLTKPKKEHGSGLSF 828
Query: 844 DLNKAADVGDDKDGSHNSSDLTVDH-EEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFK 902
DLN+AAD DGSHN+SDLT D+ ++E GF+ +L + D+++ VD A+ F+
Sbjct: 829 DLNQAADT---DDGSHNTSDLTTDNDQDEQGFSGKLSLQ-CVPFAFHDMVSRVDDAVAFR 884
Query: 903 PVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGRTGLEDWTEKVLVP 962
VDF +RR +T ++++F +IIG++LS+E+ +EAL++++ GVWLG+T LE+W EK +VP
Sbjct: 885 AVDFAAVRRRITETLSERFETIIGESLSVEVEEEALQRILSGVWLGQTELEEWIEKAIVP 944
Query: 963 SLHQLKLRLPNNATAATDESATVRLELDDGSGSRSHGELLPSSIRVVV 1010
L QLK R+ ++ T + RLELD+ SG R+ G+LLP++I + V
Sbjct: 945 VLSQLKARVSSSGTYG--DCTVARLELDEDSGERNAGDLLPTTITLAV 990
>gi|297736015|emb|CBI24053.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/708 (67%), Positives = 567/708 (80%), Gaps = 10/708 (1%)
Query: 309 IGKLVARFG-GGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPR 367
+GKL+A FG G GRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAA+TP+ G+F R
Sbjct: 1 MGKLLATFGEGSNGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAARTPVPGLFSR 60
Query: 368 LGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKL- 426
G+NGILSSSVESL+P+K+ F T ALPRRVSEN+DPA++MSCC QC++NYEQEL KL
Sbjct: 61 FGTNGILSSSVESLTPMKN-FPTAITALPRRVSENMDPAQKMSCCPQCMENYEQELGKLE 119
Query: 427 SKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKW 486
+EFEKSSSEVKSEV+R LPQWL NAKA DGD KT +Q++ KDQ+LIWKQK Q+L KKW
Sbjct: 120 GQEFEKSSSEVKSEVSRSSLPQWLKNAKALDGDVKTTDQSQTKDQELIWKQKPQDLLKKW 179
Query: 487 NDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNS 546
NDTCL+ HPNFH +L ERI P LSMTGLYN+ LL RQ FQPK+Q RNLG+TLQLNS
Sbjct: 180 NDTCLHLHPNFHQPNLNSERITPTALSMTGLYNATLLGRQAFQPKLQPTRNLGETLQLNS 239
Query: 547 NMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLH 606
N+V++QP E+AV+P SPVRTDLVLGR+K+ E+ EK H E VKDF CISSE NK H
Sbjct: 240 NLVANQPCEQAVTPPGSPVRTDLVLGRTKINETTTEKIHKEHVKDFFQCISSES-LNKFH 298
Query: 607 ESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDM 666
E QND+L PLD DS K+LLK L EKV WQQ+AA VATTVTQCK+GNGKRR AGSKGD+
Sbjct: 299 ELQNDKLS-PLDADSVKKLLKGLAEKVSWQQDAARTVATTVTQCKMGNGKRRSAGSKGDI 357
Query: 667 WLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEAVK 726
WLLF GPDR+GKKKMA+ALSELV G +PIMI LG RRD E ++ RGKTA+D+I EAV+
Sbjct: 358 WLLFTGPDRIGKKKMAAALSELVCGVNPIMICLGSRRDDGELDMNFRGKTAVDRIAEAVR 417
Query: 727 RNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKF 786
RN FSVI+LEDIDEADM+V+G+IKRAMERGRLVDS+GRE+SLGNVIFILTA+WL D+ K
Sbjct: 418 RNHFSVIMLEDIDEADMLVQGSIKRAMERGRLVDSHGREVSLGNVIFILTANWLVDNRKS 477
Query: 787 LSQGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGLSFDLN 846
LS L+E+KL S+A G WQL+LS K+ KRRA+WL +E+RSTKPRKE GS LSFDLN
Sbjct: 478 LSNSTLLNEEKLASIAGGGWQLKLSASEKSAKRRANWLHDEDRSTKPRKENGSALSFDLN 537
Query: 847 KAADVGDDK-DGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVD 905
+AAD DD+ DGS NSSDLT+DHE+E G NR L P TS S++LLNSVD+ I FKPVD
Sbjct: 538 QAADTEDDRADGSRNSSDLTIDHEDEQGPENRCL--PPTSA-SRELLNSVDNVITFKPVD 594
Query: 906 FGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGRTGLEDWTEKVLVPSLH 965
F IR V + I +KFSS++GD LSI++ DEALEK++GGVWLGR+GLE+W EKVLVP H
Sbjct: 595 FNPIRHQVRSCIARKFSSVMGDKLSIQVEDEALEKILGGVWLGRSGLEEWAEKVLVPGFH 654
Query: 966 QLKLRLPNNATAATDESATVRLE-LDDGSGSRSHGELLPSSIRVVVEG 1012
QLK + + A + + VRLE D S SR +G+ LPS I VVV G
Sbjct: 655 QLKASMSSTDAACDESTMLVRLEFFDSDSDSRGYGDWLPSKITVVVGG 702
>gi|15234709|ref|NP_194764.1| heat shock-related protein [Arabidopsis thaliana]
gi|7269935|emb|CAB81028.1| putative protein [Arabidopsis thaliana]
gi|332660355|gb|AEE85755.1| heat shock-related protein [Arabidopsis thaliana]
Length = 924
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/1076 (47%), Positives = 651/1076 (60%), Gaps = 219/1076 (20%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRA L TIQQTLTPEAA+VLN SIAEA+RRNHG TTPLHVAATLL+S SGYLRQACIKSH
Sbjct: 1 MRADLITIQQTLTPEAATVLNQSIAEATRRNHGHTTPLHVAATLLSSSSGYLRQACIKSH 60
Query: 61 PNSSHPLQCRALELCFSVALERL-----------PTAQQNVSPGLDPPISNALMAALKRA 109
PNSSHPLQCRALELCFSVALERL ++ + S +P +SNAL AALKRA
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTTSTTTTTTSSSSSSSPSQTQEPLLSNALTAALKRA 120
Query: 110 QAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNS 169
QAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK+ IEQSL
Sbjct: 121 QAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKSAIEQSLIG 180
Query: 170 SCSVSNS-----------SPIGLGFR----PSSRNLYMNPRLQQAG-------------- 200
+ SVSNS S IG G+R P +RNLY+NPRLQQ G
Sbjct: 181 N-SVSNSRQTGSPGIINPSAIGFGYRSVPAPVNRNLYLNPRLQQPGVGMQSGMMIQRTDE 239
Query: 201 ---------------GVCGGQSEPEMVVRESLAKIESKEL-DGVLKNVQIIRLDKDFTCD 244
V G SEP ++V+E L KIE+ E DG L+N Q+IRL+K+
Sbjct: 240 AKRVIEIMIRTRKRNPVLVGDSEPHILVKEILEKIENGEFSDGALRNFQVIRLEKELV-- 297
Query: 245 KAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAE 304
+ + ++L ++ L+ET+ G G V LDLGDLKWLVE + G
Sbjct: 298 -SQLATRLGEISGLVETRIGGGGVV-LDLGDLKWLVEHPAANGG---------------- 339
Query: 305 VVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGM 364
V E+ KL+ R+ GRL IGTATCETYLRCQVY+PSMENDWDLQA+PIAAK+ L +
Sbjct: 340 AVVEMRKLLERY---KGRLCFIGTATCETYLRCQVYYPSMENDWDLQAIPIAAKSSLPAI 396
Query: 365 FPRLGSNG-----ILSS---SVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCL 416
FPRLGSN +LS+ S+ES+SP +S FQ P +MSCC +CL
Sbjct: 397 FPRLGSNNNNNAMLLSNNIISIESISPTRS-FQI--------------PMSKMSCCSRCL 441
Query: 417 QNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWK 476
Q+YE ++AK+ K+ + R +LPQWL NAKA+D DK KDQ ++
Sbjct: 442 QSYENDVAKVEKDLTGDN--------RSVLPQWLQNAKANDDGDKKL----TKDQQIV-- 487
Query: 477 QKSQELQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNR 536
ELQKKWND CL HPN S ERI P LSM
Sbjct: 488 ----ELQKKWNDLCLRLHPNQSVS----ERIAPSTLSM---------------------- 517
Query: 537 NLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCI 596
+++N+ ++P SPV TDLVLGR S+PEK
Sbjct: 518 -----MKINT--------RSDITPPGSPVGTDLVLGRPNRGLSSPEK------------- 551
Query: 597 SSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK 656
K E++ +L D D FK+LLK L + VWWQ +AAS+VA +T+CK GNGK
Sbjct: 552 -------KTREARFGKLGDSFDIDLFKKLLKGLAKSVWWQHDAASSVAAAITECKHGNGK 604
Query: 657 RRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKT 716
SKGD+WL+F GPDR GK KMASALS+LVSG+ PI I LG ++ + +RGKT
Sbjct: 605 -----SKGDIWLMFTGPDRAGKSKMASALSDLVSGSQPITISLGSSSRMDDG-LNIRGKT 658
Query: 717 ALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT 776
ALD+ EAV+RNPF+VI+LEDIDEAD+++R N+K A+ERGR+ DSYGRE+SLGNVI ILT
Sbjct: 659 ALDRFAEAVRRNPFAVIVLEDIDEADILLRNNVKIAIERGRICDSYGREVSLGNVIIILT 718
Query: 777 ADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSI--RGKTTKRRASWLDEEERSTKPR 834
A+ SL ++DE +L SL + W+LRLS+ KT KR+ +WL + TK R
Sbjct: 719 AN---SSLGSAKNVASIDETRLESLVNKGWELRLSVCNSSKTRKRKPNWLYSDNDQTKQR 775
Query: 835 KETGSGLSFDLNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNS 894
KE + FDLN+AA+ +SSD+TV+H++E L+
Sbjct: 776 KE----ICFDLNEAAEF-------DSSSDVTVEHDQE-----------DNGNLVHKLVGL 813
Query: 895 VDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGRTGLED 954
VD AI+F+PVDF I+ ++ K+FS+ + D L++EI D+ALE++ G +WL + LE+
Sbjct: 814 VDDAILFRPVDFDSIKSKTAESLKKRFSNGLADGLTVEIEDDALERIAGAIWLSKISLEE 873
Query: 955 WTEKVLVPSLHQLKLRLPNNATAATDESATVRLELDDGSGSRSHGELLPSSIRVVV 1010
W E+ + SL+ +K R+ ++ E + +R+EL+D R G LPSSIR VV
Sbjct: 874 WLEEAMGSSLNSVKSRV------SSSEDSVIRIELEDDLNDRISGGYLPSSIRTVV 923
>gi|413916916|gb|AFW56848.1| hypothetical protein ZEAMMB73_979207 [Zea mays]
Length = 1023
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/1086 (43%), Positives = 634/1086 (58%), Gaps = 136/1086 (12%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRA LSTIQQTLTPEAA+ L +I EA+RR HGQTTPLHVAA LLA+P+G LRQAC ++
Sbjct: 1 MRADLSTIQQTLTPEAAAALARAIDEAARRRHGQTTPLHVAAALLAAPAGLLRQACARAA 60
Query: 61 PNSS-----------HPLQCRALELCFSVALERLPTAQQNVSPGL----DPPISNALMAA 105
+ HPLQCRALELCFSVAL+RLP A + PP+SNAL+AA
Sbjct: 61 AAGAGPGAAGSAGGAHPLQCRALELCFSVALDRLPAAASAAAAAASHASGPPVSNALVAA 120
Query: 106 LKRAQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ 165
LKRAQA QRRGCPE QQPLLAVKVELEQL++SILDDPSVSRVMREASFSS AVK TIEQ
Sbjct: 121 LKRAQAQQRRGCPEAAQQPLLAVKVELEQLVLSILDDPSVSRVMREASFSSSAVKTTIEQ 180
Query: 166 ---------SLNSSCSVSNSSPIGLGFRPSSR----NLYMNPRLQ--------------- 197
S S+ +V+ ++ + P SR N YMNPRL
Sbjct: 181 SLASPSPPPSAVSTPTVAATTTLAPSPSPLSRLGSANAYMNPRLAAAAGGGGDDARKVLD 240
Query: 198 ------QAGGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKD---FTCDKAGI 248
+ V G + P+ V++E++ +I L +++ L+ D DKA +
Sbjct: 241 VMLKPARRNPVLVGDAGPDAVLKEAVRRIPMAG-SPSLAGAKVLPLESDLAKLAGDKAAL 299
Query: 249 VSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAE 308
+++ DLG +I+ + V+LDLGDLKWLV+ G + VV+E
Sbjct: 300 AARIGDLGPVIQRLLVDHGAVVLDLGDLKWLVD-----------GPAAAASEGGKAVVSE 348
Query: 309 IGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRL 368
+ +L+ +F G G++W +GTA C TYLRC+VYHP+ME +WDLQAV IA PL+G R
Sbjct: 349 MARLLRQF--GSGKVWAVGTAACATYLRCKVYHPTMEAEWDLQAVSIARSAPLAGAALRP 406
Query: 369 GSNGILSSSVESLSPLKSAFQTTAAAL---PRRVSENLDPARRMSCCRQCLQNYEQELAK 425
GS GIL +SV LS T AL P S+N A+ + C C +Y++ELAK
Sbjct: 407 GSTGILGNSVGMLSHTLRPMPVTPTALRWPPGAGSDNPLMAKPVMCL-LCKGSYDRELAK 465
Query: 426 LSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKK 485
L+ E +K + ++E A+P LP W+ +++Q + K+Q+L K+ ++EL+KK
Sbjct: 466 LAAE-QKENPASRAEAAKPGLPHWMQ---------PSSDQPQTKEQELKRKEAAEELEKK 515
Query: 486 WNDTCLNQHPNFHPS---SLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTL 542
W +TC H N + SLG +VP P P +PK+Q +R TL
Sbjct: 516 WRETCARTHGNRAGAPALSLGLAALVPRP---------------PVEPKIQHSRGGVPTL 560
Query: 543 QLNSNMVSSQ---PAERAVSPLNSPVRTDLVLG---RSKVLESAPEKTHIEPVKDFLGCI 596
Q+N+N + +E SPL SPV+TDL LG +E+ ++ + E
Sbjct: 561 QMNTNWEKPEGTPTSELRKSPLGSPVKTDLALGPMDPGATVENDQKENYTE--------- 611
Query: 597 SSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK 656
L Q ++ D +SFKRLLK L +KV WQ +AASA+A V QC+ G+GK
Sbjct: 612 -------GLTSMQKAKIAGISDIESFKRLLKVLTQKVSWQSDAASAIAAVVIQCRTGSGK 664
Query: 657 RRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGP----RRDHEEPEVRV 712
RR G++GD+WLLF+GPD+ GK+KM +ALSEL+ A P+++ G +D
Sbjct: 665 RRNIGTRGDIWLLFVGPDQAGKRKMVNALSELMVNAQPVVVNFGGDSRLSKDGNGLNPGF 724
Query: 713 RGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVI 772
GKT+LD++ EAV++NP SVI+LE ID+ D VVRG IKRAME GRLVDS GRE+SLGNVI
Sbjct: 725 WGKTSLDRVTEAVRQNPCSVIILEGIDQVDAVVRGKIKRAMETGRLVDSRGREVSLGNVI 784
Query: 773 FILTADWLPDSL---KFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEER 829
F+LT +WLP+ L KF + + DE ++ +AS WQL LSI K K RA WL ++ R
Sbjct: 785 FVLTTNWLPEELRRPKF--ETLLQDEGRMLEVASSNWQLELSIEDKQVKHRADWLCDDAR 842
Query: 830 STKPRKET--GSGLSFDLNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTP 887
K KE G GLS DLN A DD DGS NSSDL+V+ E E G L + ST P
Sbjct: 843 PAKVAKELSGGQGLSLDLNLAVGALDDTDGSRNSSDLSVEQEHEKGH---LAVKCSTPAP 899
Query: 888 SQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWL 947
DLLN VD AIVF+PVDF R+ VT+ I+ KF S+IG S I ++A++++ G +WL
Sbjct: 900 DYDLLNLVDDAIVFRPVDFAPFRKTVTDCISAKFDSVIGSCNSFRIDEDAVDRMAGSIWL 959
Query: 948 GRTGLEDWTEKVLVPSLHQLKLRLPNNATAATDESATVRLELDDGSGSRSHGELLPSSIR 1007
LEDW EKVL+PS+ +L + + + A A V + G G LP+++
Sbjct: 960 TDEKLEDWAEKVLMPSIERLWCNVKHYSGRAVVRIAAVTDKALPRLGWAREG--LPATVP 1017
Query: 1008 VVVEGL 1013
+ ++G+
Sbjct: 1018 IAIDGM 1023
>gi|242078685|ref|XP_002444111.1| hypothetical protein SORBIDRAFT_07g008090 [Sorghum bicolor]
gi|241940461|gb|EES13606.1| hypothetical protein SORBIDRAFT_07g008090 [Sorghum bicolor]
Length = 1051
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/1111 (41%), Positives = 624/1111 (56%), Gaps = 158/1111 (14%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRA LSTIQQTLTPEAA+ L +I EA+RR HGQTTPLHVAA LLA+P+G LRQAC ++
Sbjct: 1 MRADLSTIQQTLTPEAAAALARAIDEAARRRHGQTTPLHVAAALLAAPAGLLRQACARAA 60
Query: 61 PNSS-----------HPLQCRALELCFSVALERLPTAQQNVSPGL-DPPISNALMAALKR 108
+ HPL CRALELCFSVAL+RLP A PP+SNAL+AALKR
Sbjct: 61 AAGAGPGAGGGAGGAHPLPCRALELCFSVALDRLPAAASAAVAHAAGPPVSNALVAALKR 120
Query: 109 AQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN 168
AQA QRRGCPE QQPLLAVKVELEQL++SILDDPSVSRVMREASFSS AVK TIEQSL
Sbjct: 121 AQAQQRRGCPEAAQQPLLAVKVELEQLVLSILDDPSVSRVMREASFSSAAVKTTIEQSLA 180
Query: 169 S------------------------------SCSVSNSSPIGLGFRPSSRNLYMNPRLQQ 198
S + + + + N Y+NPRL
Sbjct: 181 SPSPPPAAVSTATVAATTPLAPSPSPLPRVGTANAYINPRLAAAAGGGGDNAYINPRLAA 240
Query: 199 AGGVCG--------------------------------------GQSEPEMVVRESLAKI 220
G G G + P+ V++E + +I
Sbjct: 241 VAGGAGDNAYINPRLAAAVGGGGDDARKVLDVMLKPARRNPVLVGDAGPDAVLKEVVRRI 300
Query: 221 ESKELDGVLKNVQIIRLDKD---FTCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLK 277
L +++ L+ D CDKA + +++ DLGA ++ + V+LDLGDLK
Sbjct: 301 PMAG-SPALAGAKVLPLEGDLAKLACDKAAMAARIGDLGASVQRLLADHGAVVLDLGDLK 359
Query: 278 WLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCETYLRC 337
WLV+ G + VV+E+ +L+ RF G G++W +GTA C TYLRC
Sbjct: 360 WLVD-----------GPAAAASEAGKAVVSEMARLLRRF--GSGKVWAVGTAACATYLRC 406
Query: 338 QVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAAL-- 395
+VYHP+ME +WDLQAVPIA PL+G R G GIL +SV LSP T AL
Sbjct: 407 KVYHPTMEAEWDLQAVPIARSAPLAGAGLRSGGTGILGNSVGMLSPTLRPMPLTPTALRW 466
Query: 396 PRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKA 455
P + + + C C +Y++ELAKL+ E +K E +P LP W+
Sbjct: 467 PPGAGSDHPLMAKPTMCMLCKGSYDRELAKLAAE-QKEKPTSCPEAVKPGLPHWMQ---- 521
Query: 456 HDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMT 515
+++QT+ K+Q+L K+ ++EL+KKW +TC H N + V +PL+
Sbjct: 522 -----PSSDQTQTKEQELKRKEAAEELEKKWRETCACTHGNRAGAP-----AVSLPLAA- 570
Query: 516 GLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNM---VSSQPAERAVSPLNSPVRTDLVLG 572
L +R P +PK+QL R TL++N++ + +E SP SPV+TDL LG
Sbjct: 571 ------LASRPPVEPKLQLARGGVPTLKMNTSWDKPEGTPTSELRKSPPGSPVKTDLALG 624
Query: 573 ---RSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSL 629
+E ++ + E L Q ++ D +SFKRLLK L
Sbjct: 625 PLDPGATVEKDQKENYTE----------------GLTAMQKAKIAGISDIESFKRLLKVL 668
Query: 630 MEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELV 689
EKV WQ +AASA+A V QC+ G+GKRR G++GD+WLLF+GPD+ GK+KMA+ALSEL+
Sbjct: 669 TEKVSWQSDAASAIAAVVIQCRTGSGKRRNIGTRGDIWLLFVGPDQAGKRKMANALSELM 728
Query: 690 SGASPIMIPL-GPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGN 748
A P++I G R ++ GKT+LD++ EAV++NP SVI+LE ID+ D+VVRG
Sbjct: 729 VNAQPVVINFGGDSRLGKDGNAGFWGKTSLDRVTEAVRQNPCSVIVLEGIDQVDVVVRGK 788
Query: 749 IKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL---KFLSQGITLDEKKLTSLASGE 805
IKRAME GRL DS GRE+SLGNV+F+LT +WLP+ L KF + + DE ++ +AS
Sbjct: 789 IKRAMETGRLPDSRGREVSLGNVVFVLTTNWLPEELRRPKF--ETLLQDEGRMFEVASSN 846
Query: 806 WQLRLSIRGKTTKRRASWLDEEERSTKPRKET--GSGLSFDLNKAADVGDDKDGSHNSSD 863
WQL LSI K K RA WL ++ R K KE G GLS DLN A DD +GS NSSD
Sbjct: 847 WQLELSIGDKQIKHRADWLCDDARPAKVAKELSGGPGLSLDLNLAVGALDDTEGSRNSSD 906
Query: 864 LTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSS 923
L+V+ ++E G L + ST P DLLN VD AIVF+PVDF R+ VT+ I+ KF S
Sbjct: 907 LSVEQDQEKGH---LAVKCSTPDPDCDLLNLVDDAIVFRPVDFAPFRKTVTDCISAKFDS 963
Query: 924 IIGDALSIEILDEALEKLVGGVWLGRTGLEDWTEKVLVPSLHQLKLRLPN-NATAATDES 982
+I + S I ++A++ + G +WL LEDW EKVL+PS+ +L + + + A +
Sbjct: 964 VIRSSNSFRIDEDAVDHMAGSIWLTDEKLEDWAEKVLMPSIERLWRNVKHYSGRAVVRLA 1023
Query: 983 ATVRLELDDGSGSRSHGELLPSSIRVVVEGL 1013
A L G R E LP+++ + ++G+
Sbjct: 1024 AVTDKALPRWGGGR---EGLPATVPIAIDGM 1051
>gi|224142299|ref|XP_002324496.1| predicted protein [Populus trichocarpa]
gi|222865930|gb|EEF03061.1| predicted protein [Populus trichocarpa]
Length = 543
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/548 (65%), Positives = 427/548 (77%), Gaps = 7/548 (1%)
Query: 467 ENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQ 526
+ KDQ+L+ KQK ELQK W+D CL+ HP +H +LG ERI LSMT L+N NLL RQ
Sbjct: 2 QTKDQELMLKQKRLELQKNWHDRCLHLHPAYHQPNLGSERIAQPALSMTNLHNHNLLPRQ 61
Query: 527 PFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHI 586
PFQPK+ LN+ TL N N++ SQPA RA +P SPVRTDLVLGR KV+ PEK H
Sbjct: 62 PFQPKLSLNKKPDRTLVFNPNLLPSQPAGRATTPPGSPVRTDLVLGRPKVVGETPEKEHE 121
Query: 587 EPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
+ KDFL C+ SEP N +E + +L LD DSFK+LLK L+EKVWWQ++AASAVATT
Sbjct: 122 DRTKDFLSCVPSEPRPN-FNELHSVKLLSKLDADSFKKLLKGLLEKVWWQRDAASAVATT 180
Query: 647 VTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
VTQCKLG+GK R GSKGD+WLLF GPDR GKKKMASALSELV GA+PIM+ LG R+
Sbjct: 181 VTQCKLGHGKGRSTGSKGDIWLLFTGPDRAGKKKMASALSELVCGANPIMVCLGSWREDG 240
Query: 707 EPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREI 766
E EV RGKT LD+I EAV+RNPFSVI+LEDIDEADM+VRG+IKRAMERGR+ DS GREI
Sbjct: 241 ESEVSFRGKTVLDRIAEAVRRNPFSVIILEDIDEADMLVRGSIKRAMERGRIADSLGREI 300
Query: 767 SLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDE 826
SLGNVIFILTA+ LPD+LKFLS GI+LDEKKL SLASG WQLRL++ +T KRRA+WL +
Sbjct: 301 SLGNVIFILTANRLPDNLKFLSNGISLDEKKLASLASGGWQLRLTLSERTAKRRANWLHD 360
Query: 827 EERSTKPRKETGSGLSFDLNKAADVGDDK-DGSHNSSDLTVDHEEEHGFTNRLLMTPSTS 885
EERS KPRK+ G+ L+FDLN+AA+ GDDK DGSHNSSDLTVDHE+E NRLL T +TS
Sbjct: 361 EERSAKPRKDLGTALAFDLNEAAETGDDKADGSHNSSDLTVDHEDEDALNNRLL-TSATS 419
Query: 886 TPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGV 945
+ S++LLN VD IVFK DF IR D++N+ITKKFS+I + + IEI DEALEK+VGG+
Sbjct: 420 SVSKELLNLVDDHIVFKHADFSSIRHDISNSITKKFSTIFSNQMQIEIQDEALEKIVGGI 479
Query: 946 WLGRTGLEDWTEKVLVPSLHQLKLRLPNNATAATDESATVRLELDDGSGSRSHGELLPSS 1005
WL RTGLE+WT+ VLVPSL QLKLRLP +ES +RLE D S SRSHG+ LPSS
Sbjct: 480 WLARTGLEEWTDNVLVPSLRQLKLRLP----ICANESTIIRLEPDTDSDSRSHGDWLPSS 535
Query: 1006 IRVVVEGL 1013
IRVVV+GL
Sbjct: 536 IRVVVDGL 543
>gi|413922132|gb|AFW62064.1| hypothetical protein ZEAMMB73_199434 [Zea mays]
Length = 1028
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1032 (43%), Positives = 599/1032 (58%), Gaps = 117/1032 (11%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRA LSTIQQTLTPEAA+ L +I EA+RR HGQTTPLHVAA LLA+P+G LRQAC ++
Sbjct: 1 MRADLSTIQQTLTPEAAAALARAIDEAARRRHGQTTPLHVAAALLAAPAGLLRQACARAA 60
Query: 61 PNSS-----------HPLQCRALELCFSVALERLPTAQQNVSPGLD--PPISNALMAALK 107
+ HPLQCRALELCFSVAL+RLP A + PP+SNAL+AALK
Sbjct: 61 ATGAGPGAAGGAGGAHPLQCRALELCFSVALDRLPAAAAASAAAHASGPPVSNALVAALK 120
Query: 108 RAQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSL 167
RAQA QRRGCPE QQPLLAVKVELEQL++SILDDPSVSRVMREASFSS AVK TIEQSL
Sbjct: 121 RAQAQQRRGCPEAAQQPLLAVKVELEQLVLSILDDPSVSRVMREASFSSAAVKTTIEQSL 180
Query: 168 N--------SSCSVSNSSPIGLGFRPSSR----NLYMNPRLQ------------------ 197
S+ +V+ ++P+ P R N Y+NPRL
Sbjct: 181 PSPSAAAVVSTPTVAATTPVAPSPSPFPRVGPTNAYINPRLAAAAGVGGGRDDVRKVLDV 240
Query: 198 -----QAGGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKD---FTCDKAGIV 249
+ V G + P+ V+RE++ +I + + L +++ L+ D DKA +
Sbjct: 241 MLKPARRNPVLVGDAGPDAVLREAVRRIPTSD-SHALAGAKVLPLEADLAKLAGDKAAMA 299
Query: 250 SKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEI 309
+++ DLGA+++ + V+LDLGDLKWLV+ G + VV+E+
Sbjct: 300 ARIGDLGAMVQRILADHGAVVLDLGDLKWLVD-----------GPAAAASEGGKAVVSEM 348
Query: 310 GKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLG 369
+L+ F G ++W +GTA C TYLRC+VYHP+ME DWDLQAVPIA PL+G R G
Sbjct: 349 ARLLGPF--GSRKVWAVGTAACATYLRCKVYHPTMEADWDLQAVPIARSAPLAGAALRPG 406
Query: 370 SNGILSSSVESLSPLKSAFQTTAAAL--PRRVSENLDPARRMSCCRQCLQNYEQELAKLS 427
GIL +SV LSP T AL P + + + C C +Y++ELAKL
Sbjct: 407 GIGILGNSVGMLSPALRPMPVTPTALRWPPGAGSDHPLKAKPAMCLLCKGSYDRELAKLL 466
Query: 428 KEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWN 487
E +K E A+P LP W+ ++ +Q + K+Q+L + ++EL+KKW+
Sbjct: 467 AE-QKEKPASSPEAAKPGLPHWMQPSR---------DQPQTKEQELKQNEAAEELEKKWH 516
Query: 488 DTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSN 547
+TC H N R V L + L R P +PK+Q TL++N+N
Sbjct: 517 ETCARTHSN---------RTV---APALSLPLAALAPRPPVEPKLQPASGGVPTLKMNTN 564
Query: 548 MVSSQ---PAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNK 604
+ +E SP SPV+TDL LG ++ EK E + L +
Sbjct: 565 WKEPEGTPTSELRKSPPGSPVKTDLALGPLDP-DATMEKDQKENYTEGLTAM-------- 615
Query: 605 LHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKG 664
Q ++ D +SFKRLLK+L EKV WQ +AASA+A V QC+ +GKRR G++G
Sbjct: 616 ----QKAKIAGISDIESFKRLLKALTEKVSWQSDAASAIAAAVIQCRTASGKRRNIGTRG 671
Query: 665 DMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLG-----PRRDHEEPEVRVRGKTALD 719
D+WLLF+GPD+ GK+KMA+ALSE + A P++I G + + P GKT+LD
Sbjct: 672 DIWLLFVGPDQAGKRKMANALSEQMVNAEPVVINFGGDSRWGKDGNGRPNPGFWGKTSLD 731
Query: 720 KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
++ EAV++NP SVI+LE ID+ D VVRG I RAM+ GRL DS GRE+SLGNVIF+LT DW
Sbjct: 732 RVTEAVRQNPCSVIVLEGIDQVDAVVRGKINRAMDTGRLPDSRGREVSLGNVIFVLTTDW 791
Query: 780 LPDSLKFLSQGITL-DEKKLTSLASGEWQLRLSIRGKTT-KRRASWLDEEERSTKPRKET 837
LP+ L+ L DE K+ A +WQL LSI K K +A WL + R K +E
Sbjct: 792 LPEELRRPKFDTPLQDEGKMLEAAHSDWQLELSIGDKQQLKHQADWLCNDARPAKVAREL 851
Query: 838 --GSGLSFDLNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSV 895
G GLS DLN A DD +GS NSSDL+V+ E+E G + + ST P DLLN V
Sbjct: 852 SGGHGLSLDLNLAVGASDDTEGSRNSSDLSVEQEQEKGH---VAVKCSTPAPDSDLLNLV 908
Query: 896 DSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGRTGLEDW 955
D AIVF+PVDF R+ VT+ ++ KF S+ + S + ++A++++ VWL LEDW
Sbjct: 909 DDAIVFRPVDFAPFRKAVTDCVSAKFDSVTRGSSSFRVDEDAVDRMAASVWLTDEKLEDW 968
Query: 956 TEKVLVPSLHQL 967
E+VL PS+ +L
Sbjct: 969 AEEVLTPSIERL 980
>gi|40253563|dbj|BAD05509.1| 101 kDa heat shock protein; HSP101-like protein [Oryza sativa
Japonica Group]
Length = 1041
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/1096 (41%), Positives = 619/1096 (56%), Gaps = 138/1096 (12%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRA LSTIQQTLTPEAA+ L ++ EA RR HGQTTPLHVAA LLA+P+G LRQAC ++
Sbjct: 1 MRADLSTIQQTLTPEAAAALARAMDEAGRRRHGQTTPLHVAAALLAAPAGLLRQACARAA 60
Query: 61 PNSS---------------HPLQCRALELCFSVALERLPTAQQNVSPGL----DPPISNA 101
+ HPL CRALELCFSVAL+RLP A + PP+SNA
Sbjct: 61 SAAGVGGGGGAAAGAGAGAHPLHCRALELCFSVALDRLPAAAAAAAAAHGAGASPPVSNA 120
Query: 102 LMAALKRAQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKA 161
L+AALKRAQA QRRGCPE QQPLLAVKVELEQL++SILDDPSVSRVMREASFSS AVK+
Sbjct: 121 LVAALKRAQAQQRRGCPEAAQQPLLAVKVELEQLVLSILDDPSVSRVMREASFSSAAVKS 180
Query: 162 TIEQSLN--SSCSVSNSSPI-----------GLGFRPSSRNLYMNPRLQ----------- 197
IEQSL+ S C + +S R + N Y+NPRL
Sbjct: 181 IIEQSLSAPSPCPSAAASTTTAGPGPLSPSPSPLPRAGAANAYLNPRLAAAAAVASGGGG 240
Query: 198 -----------------QAGGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKD 240
+ V G + P+ V++E++ +I + L +++ L+ +
Sbjct: 241 GGGDDARKVIDVMLKPTRRNPVLVGDAGPDAVLKEAIRRIPTAGFPA-LAGAKVLPLEAE 299
Query: 241 ---FTCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQ 297
DKA + +++ DLGA++E G GV+LDLGDLKWLV+ G
Sbjct: 300 LAKLAGDKAAMAARIGDLGAVVERLLGEHGGVVLDLGDLKWLVD-----------GPAAA 348
Query: 298 QQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAA 357
+ VAE+G+L+ RFG G +W + TA C TYLRC+VYHP ME +WDL AVPIA
Sbjct: 349 ASEGGKAAVAEMGRLLRRFGRAG--VWAVCTAACTTYLRCKVYHPGMEAEWDLHAVPIAR 406
Query: 358 KTPLSGMFP-----RLGSNGILSSSVESLSPLKSAFQTTAAAL--PRRVSENLDPARRMS 410
R G +GIL+SS+ LSP T AL P S+ PA + +
Sbjct: 407 GGAPIAAAAAGSALRPGGSGILNSSMGMLSPALRPMPVTPTALRWPPPGSDQ-SPAAKPA 465
Query: 411 CCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKD 470
C C +YE+ELAKL E + + E A+P LP WL + +Q + K+
Sbjct: 466 MCLLCKGSYERELAKLEAE-QTDKPASRPEAAKPGLPHWLQLSN---------DQNKAKE 515
Query: 471 QDLIWKQKSQELQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPFQP 530
Q+L K+ EL++KW +TC H S+ + VPL + R P +P
Sbjct: 516 QELKLKRSKDELERKWRETCARIH-----SACPMAPALSVPL-------ATFTPRPPVEP 563
Query: 531 KVQLNRNLG-DTLQLNSNMVSSQPA---ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHI 586
K+ + R TL++N + A E SP SPV+TDLVL R +
Sbjct: 564 KLGVARGAAVPTLKMNPSWEKPSVAPTLELRKSPPASPVKTDLVLCR------------L 611
Query: 587 EPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
+P + + L Q ++ D +SFKRLLK L EKV WQ +AASA+A
Sbjct: 612 DPGTNPAVENEQKESCEGLTALQKAKIAGISDIESFKRLLKGLTEKVSWQSDAASAIAAV 671
Query: 647 VTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLG-----P 701
V QC+ G+GKRR G++GDMWLLF+GPD+ GK+KM +ALSEL++ P+++ G
Sbjct: 672 VIQCRSGSGKRRNVGTRGDMWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFGGDSRLG 731
Query: 702 RRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDS 761
R ++ P + GKTALD++ EAV++NPFSVI+LE ID+ D+VV G IKRAME GRL DS
Sbjct: 732 RVGNDGPNMGFWGKTALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDS 791
Query: 762 YGREISLGNVIFILTADWLPDSLKFLS-QGITLDEKKLTSLASGEWQLRLSIRGKTTKRR 820
GRE+SLGNVIF+LT +W+P+ LK + + + E+++ S WQL LSI K K R
Sbjct: 792 RGREVSLGNVIFVLTTNWVPEELKGSNVETLLRGEERMLESTSSSWQLELSIGDKQVKHR 851
Query: 821 ASWLDEEERSTKPRKETGS--GLSFDLNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRL 878
A WL ++ R K KE S GLS DLN A DD +GSHNSSD++V+ E+E G +L
Sbjct: 852 ADWLCDDVRPAKLAKELSSSHGLSLDLNLAVGALDDTEGSHNSSDVSVEQEQEKG---QL 908
Query: 879 LMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEAL 938
+ ST P D+L VD AIVF+PVDF R+ VT+ I+ KF S++G + S I ++A+
Sbjct: 909 AVKRSTPAPGSDILELVDDAIVFRPVDFTPFRKTVTDCISAKFESVMGSSSSFRIDEDAV 968
Query: 939 EKLVGGVWLGRTGLEDWTEKVLVPSLHQLKLRLPNNATAATDE-SATVRLELDDGSGSRS 997
+ +VG VWL +EDW EKVL PS+ +L + +++ + +A L G R
Sbjct: 969 DWMVGSVWLTDEKIEDWAEKVLKPSIERLWHNVKHDSGRSIIRLTAVAAKALPRWGGGR- 1027
Query: 998 HGELLPSSIRVVVEGL 1013
E LP ++ + ++G+
Sbjct: 1028 --EGLPVAVTIAIDGM 1041
>gi|115475559|ref|NP_001061376.1| Os08g0250900 [Oryza sativa Japonica Group]
gi|113623345|dbj|BAF23290.1| Os08g0250900, partial [Oryza sativa Japonica Group]
Length = 972
Score = 634 bits (1634), Expect = e-178, Method: Compositional matrix adjust.
Identities = 417/1017 (41%), Positives = 569/1017 (55%), Gaps = 123/1017 (12%)
Query: 65 HPLQCRALELCFSVALERLPTAQQNVSPGL----DPPISNALMAALKRAQAHQRRGCPEQ 120
HPL CRALELCFSVAL+RLP A + PP+SNAL+AALKRAQA QRRGCPE
Sbjct: 11 HPLHCRALELCFSVALDRLPAAAAAAAAAHGAGASPPVSNALVAALKRAQAQQRRGCPEA 70
Query: 121 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN--SSCSVSNSSP 178
QQPLLAVKVELEQL++SILDDPSVSRVMREASFSS AVK+ IEQSL+ S C + +S
Sbjct: 71 AQQPLLAVKVELEQLVLSILDDPSVSRVMREASFSSAAVKSIIEQSLSAPSPCPSAAAST 130
Query: 179 I-----------GLGFRPSSRNLYMNPRLQ----------------------------QA 199
R + N Y+NPRL +
Sbjct: 131 TTAGPGPLSPSPSPLPRAGAANAYLNPRLAAAAAVASGGGGGGGDDARKVIDVMLKPTRR 190
Query: 200 GGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKD---FTCDKAGIVSKLKDLG 256
V G + P+ V++E++ +I + L +++ L+ + DKA + +++ DLG
Sbjct: 191 NPVLVGDAGPDAVLKEAIRRIPTAGFPA-LAGAKVLPLEAELAKLAGDKAAMAARIGDLG 249
Query: 257 ALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARF 316
A++E G GV+LDLGDLKWLV+ G + VAE+G+L+ RF
Sbjct: 250 AVVERLLGEHGGVVLDLGDLKWLVD-----------GPAAAASEGGKAAVAEMGRLLRRF 298
Query: 317 GGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFP-----RLGSN 371
G G +W + TA C TYLRC+VYHP ME +WDL AVPIA R G +
Sbjct: 299 GRAG--VWAVCTAACTTYLRCKVYHPGMEAEWDLHAVPIARGGAPIAAAAAGSALRPGGS 356
Query: 372 GILSSSVESLSPLKSAFQTTAAAL--PRRVSENLDPARRMSCCRQCLQNYEQELAKLSKE 429
GIL+SS+ LSP T AL P S+ PA + + C C +YE+ELAKL E
Sbjct: 357 GILNSSMGMLSPALRPMPVTPTALRWPPPGSDQ-SPAAKPAMCLLCKGSYERELAKLEAE 415
Query: 430 FEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDT 489
+ + E A+P LP WL + +Q + K+Q+L K+ EL++KW +T
Sbjct: 416 -QTDKPASRPEAAKPGLPHWLQLSN---------DQNKAKEQELKLKRSKDELERKWRET 465
Query: 490 CLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLG-DTLQLNSNM 548
C H S+ + VPL + R P +PK+ + R TL++N +
Sbjct: 466 CARIH-----SACPMAPALSVPL-------ATFTPRPPVEPKLGVARGAAVPTLKMNPSW 513
Query: 549 VSSQPA---ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKL 605
A E SP SPV+TDLVL R ++P + + L
Sbjct: 514 EKPSVAPTLELRKSPPASPVKTDLVLCR------------LDPGTNPAVENEQKESCEGL 561
Query: 606 HESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGD 665
Q ++ D +SFKRLLK L EKV WQ +AASA+A V QC+ G+GKRR G++GD
Sbjct: 562 TALQKAKIAGISDIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNVGTRGD 621
Query: 666 MWLLFMGPDRVGKKKMASALSELVSGASPIMIPLG-----PRRDHEEPEVRVRGKTALDK 720
MWLLF+GPD+ GK+KM +ALSEL++ P+++ G R ++ P + GKTALD+
Sbjct: 622 MWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFGGDSRLGRVGNDGPNMGFWGKTALDR 681
Query: 721 IGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWL 780
+ EAV++NPFSVI+LE ID+ D+VV G IKRAME GRL DS GRE+SLGNVIF+LT +W+
Sbjct: 682 VTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDSRGREVSLGNVIFVLTTNWV 741
Query: 781 PDSLKFLS-QGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGS 839
P+ LK + + + E+++ S WQL LSI K K RA WL ++ R K KE S
Sbjct: 742 PEELKGSNVETLLRGEERMLESTSSSWQLELSIGDKQVKHRADWLCDDVRPAKLAKELSS 801
Query: 840 --GLSFDLNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDS 897
GLS DLN A DD +GSHNSSD++V+ E+E G +L + ST P D+L VD
Sbjct: 802 SHGLSLDLNLAVGALDDTEGSHNSSDVSVEQEQEKG---QLAVKRSTPAPGSDILELVDD 858
Query: 898 AIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGRTGLEDWTE 957
AIVF+PVDF R+ VT+ I+ KF S++G + S I ++A++ +VG VWL +EDW E
Sbjct: 859 AIVFRPVDFTPFRKTVTDCISAKFESVMGSSSSFRIDEDAVDWMVGSVWLTDEKIEDWAE 918
Query: 958 KVLVPSLHQLKLRLPNNATAATDE-SATVRLELDDGSGSRSHGELLPSSIRVVVEGL 1013
KVL PS+ +L + +++ + +A L G R E LP ++ + ++G+
Sbjct: 919 KVLKPSIERLWHNVKHDSGRSIIRLTAVAAKALPRWGGGR---EGLPVAVTIAIDGM 972
>gi|147815203|emb|CAN74565.1| hypothetical protein VITISV_004969 [Vitis vinifera]
Length = 959
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 309/516 (59%), Positives = 371/516 (71%), Gaps = 59/516 (11%)
Query: 177 SPIGLG-FR------PS-SRNLYMNPRLQQAGG--------------------------- 201
SPIGLG FR P+ +RNLY+NPRLQQ G
Sbjct: 12 SPIGLGGFRGPCAPTPTPTRNLYLNPRLQQQGNAATAAAAANQSGHQRAEKVKRVVDILL 71
Query: 202 -------VCGGQSEPEMVVRESLAKIESKEL-DGVLKNVQIIRLDKDFT---CDKAGIVS 250
V G+SEPE V++E L +IE ++ DG LKNV++I L ++ + D+ I +
Sbjct: 72 RTKKRNPVLVGESEPEAVMKELLRRIEKRDFGDGPLKNVEVISLHRELSLNNSDRTQIPT 131
Query: 251 KLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEV----V 306
KLK+LG L+E + G G +ILDLGDLKWLVEQ V + GV SGT+ QQ V++E V
Sbjct: 132 KLKELGRLVEARIGGGS-IILDLGDLKWLVEQPV-NLGVAGSGTVGQQ--VVSEAGRAAV 187
Query: 307 AEIGKLVARFG-GGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMF 365
AE+GKL+A FG G GRLWLIGTATCETYLR QVYHPSMENDWDLQAVPIAA+TP+ G+F
Sbjct: 188 AEMGKLLAMFGEGSNGRLWLIGTATCETYLRFQVYHPSMENDWDLQAVPIAARTPVPGLF 247
Query: 366 PRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAK 425
R G+NGILSSSVESL+P+K+ F T ALPRRVSEN+DPA++MSCC QC++NYEQEL K
Sbjct: 248 SRFGTNGILSSSVESLTPMKN-FPTAITALPRRVSENMDPAQKMSCCPQCMENYEQELGK 306
Query: 426 L-SKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQK 484
L +EFEKSSSEVKSEV+R LPQWL NAKA DGD KT +Q++ KDQ+LIWKQK Q+L K
Sbjct: 307 LEGQEFEKSSSEVKSEVSRSSLPQWLKNAKALDGDVKTTDQSQTKDQELIWKQKPQDLLK 366
Query: 485 KWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQL 544
KWNDTCL+ HPNFH +L ERI P LSM+GLYN+ LL RQ FQPK+Q RNLG+TLQL
Sbjct: 367 KWNDTCLHLHPNFHQHNLNSERITPTALSMSGLYNATLLGRQAFQPKLQPTRNLGETLQL 426
Query: 545 NSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNK 604
NSN+V++QP E+AV+P SPVRTDLVLGR+K+ E+ EK H E V DF CISSE NK
Sbjct: 427 NSNLVANQPCEQAVTPPGSPVRTDLVLGRTKINETTTEKIHKEHVIDFFQCISSE-SLNK 485
Query: 605 LHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAA 640
HE QND+L PLD DS K+LLK L EKV WQQ+AA
Sbjct: 486 FHELQNDKLS-PLDADSVKKLLKGLAEKVSWQQDAA 520
>gi|224091889|ref|XP_002309387.1| predicted protein [Populus trichocarpa]
gi|222855363|gb|EEE92910.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 511 bits (1315), Expect = e-141, Method: Compositional matrix adjust.
Identities = 291/415 (70%), Positives = 322/415 (77%), Gaps = 55/415 (13%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAA LL SPSG+LRQACIKSH
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAAILLGSPSGFLRQACIKSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQ 120
PNSSHPLQCRALELCFSVALERLPTA QN+SPGLDPPISNALMAALKRAQAHQRRGCPEQ
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTA-QNLSPGLDPPISNALMAALKRAQAHQRRGCPEQ 119
Query: 121 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNS---S 177
QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN+S + SNS S
Sbjct: 120 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNASTN-SNSAANS 178
Query: 178 PIGLGFRP----------SSRNLYMNPRLQQA--------------------------GG 201
IG+GFR ++RNLY+NPRLQQ
Sbjct: 179 GIGMGFRAPGAVAVPAPVTNRNLYVNPRLQQGSVGQSGAQRNEEVKKVIDILLKSKKRNP 238
Query: 202 VCGGQSEPEMVVRESLAKIESKEL-DGVLKNVQIIRLDKDFTCDKAGIVSKLKDLGALIE 260
V G+SEP+MVV+E L +IE+KE+ D LKNV +I L+K F DKA I +K+ +LG LIE
Sbjct: 239 VLVGESEPQMVVQEVLKRIENKEVGDWPLKNVHVIHLEKGFL-DKAQIAAKIVELGGLIE 297
Query: 261 TKFGNGD--GVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEV----VAEIGKLV- 313
T+ N D GVILDLGDLKWLVEQQV+ G SG + QQQQ++++V VAE+ KL+
Sbjct: 298 TRIRNLDCGGVILDLGDLKWLVEQQVSLTG---SGGV-QQQQIVSDVGRSAVAEMRKLLG 353
Query: 314 -ARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPR 367
G GGG++WLIGTATCETYLRCQVYHPSMENDWDLQAVPIAA+ L G F R
Sbjct: 354 RFGEGSGGGKVWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAARAHLPGTFHR 408
>gi|125560773|gb|EAZ06221.1| hypothetical protein OsI_28463 [Oryza sativa Indica Group]
Length = 682
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 293/725 (40%), Positives = 410/725 (56%), Gaps = 63/725 (8%)
Query: 309 IGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFP-- 366
+G+L+ RFG G +W + TA C TYLRC+VYHP ME +WDL AVPIA
Sbjct: 1 MGRLLRRFGRAG--VWAVCTAACTTYLRCKVYHPGMEAEWDLHAVPIARGGAPIAAAAAG 58
Query: 367 ---RLGSNGILSSSVESLSPLKSAFQTTAAAL--PRRVSENLDPARRMSCCRQCLQNYEQ 421
R G +GIL+SS+ LSP T AL P S+ PA + + C C +YE+
Sbjct: 59 SALRPGGSGILNSSMGMLSPALRPMPVTPTALRWPPPGSDQ-SPAAKPAMCLLCKGSYER 117
Query: 422 ELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQE 481
ELAKL E + + E A+P LP WL + +Q + K+Q+L K+ E
Sbjct: 118 ELAKLEAE-QTDKPASRPEAAKPGLPHWLQLSN---------DQNKAKEQELKLKRSKDE 167
Query: 482 LQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLG-D 540
L++KW +TC H S+ + VPL+ R P +PK+ + R
Sbjct: 168 LERKWRETCARIH-----SACPMAPALSVPLA-------TFTPRPPVEPKLGVARGAAVP 215
Query: 541 TLQLNSNMVSSQPA---ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCIS 597
TL++N + A E SP SPV+TDLVL R ++P +
Sbjct: 216 TLKMNPSWEKPSVAPTLELRKSPPASPVKTDLVLCR------------LDPGTNPAVENE 263
Query: 598 SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR 657
+ L Q ++ D +SFKRLLK L EKV WQ +AASA+A V QC+ G+GKR
Sbjct: 264 QKESCEGLTALQKAKIAGISDIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKR 323
Query: 658 RGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLG-----PRRDHEEPEVRV 712
R G++GDMWLLF+GPD+ GK+KM +ALSEL++ P+++ G R ++ P +
Sbjct: 324 RNVGTRGDMWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFGGDSRLGRVGNDGPNMGF 383
Query: 713 RGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVI 772
GKTALD++ EAV++NPFSVI+LE ID+ D+VV G IKRAME GRL DS GRE+SLGNVI
Sbjct: 384 WGKTALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDSRGREVSLGNVI 443
Query: 773 FILTADWLPDSLKFLS-QGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERST 831
F+LT +W+P+ LK + + + E+++ S WQL LSI K K RA WL ++ R
Sbjct: 444 FVLTTNWVPEELKGSNVETLLRGEERMLESTSSSWQLELSIGDKQVKHRADWLCDDVRPA 503
Query: 832 KPRKETGS--GLSFDLNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQ 889
K KE S GLS DLN A DD +GSHNSSD++V+ E+E G +L + ST P
Sbjct: 504 KLAKELSSSHGLSLDLNLAVGALDDTEGSHNSSDVSVEQEQEKG---QLAVKRSTPAPGS 560
Query: 890 DLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGR 949
D+L VD AIVF+PVDF R+ VT+ I+ KF S++G + S I ++A++ +VG VWL
Sbjct: 561 DILELVDDAIVFRPVDFTPFRKTVTDCISAKFESVMGSSSSFRIDEDAVDWMVGSVWLTD 620
Query: 950 TGLEDWTEKVLVPSLHQLKLRLPNNATAATDE-SATVRLELDDGSGSRSHGELLPSSIRV 1008
+EDW EKVL PS+ +L + +++ + +A L G R E LP ++ +
Sbjct: 621 EKIEDWAEKVLKPSIERLWHNVKHDSGRSIIRLTAVAAKALPRWGGGR---EGLPVAVTI 677
Query: 1009 VVEGL 1013
++G+
Sbjct: 678 AIDGM 682
>gi|242066778|ref|XP_002454678.1| hypothetical protein SORBIDRAFT_04g035490 [Sorghum bicolor]
gi|241934509|gb|EES07654.1| hypothetical protein SORBIDRAFT_04g035490 [Sorghum bicolor]
Length = 955
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 370/1083 (34%), Positives = 531/1083 (49%), Gaps = 212/1083 (19%)
Query: 3 AGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPN 62
A L + LTP+AA+VL+ + A+ASRR H TTPLH AA LL+ P+ LR AC
Sbjct: 11 ATLPSAAPPLTPDAAAVLSRAAADASRRRHAHTTPLHAAAALLSGPAPLLRDACAAGL-A 69
Query: 63 SSHPLQCRALELCFSVALERLPTAQQ-------NVSPGLDPPISNALMAALKRAQAHQRR 115
S HPL+CRAL+LCFSVAL+RLPT+ + PP+SNAL AALKRA AH RR
Sbjct: 70 SPHPLRCRALDLCFSVALDRLPTSTELQHHHDGAFHAAAAPPLSNALAAALKRAYAHHRR 129
Query: 116 ---GCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCS 172
G E +V + L+++ILDDPSV+RVMREASFSS AVKA + +SL+ +
Sbjct: 130 IGSGGVEADDH-----RVGVPHLVLAILDDPSVARVMREASFSSTAVKAAMLRSLSDPAA 184
Query: 173 VSNSSPIG--LGFRPSS---------------RNLYMNPRLQQAGGVCGGQSEPEMVVRE 215
+ + + R +S R NP L G + + VV+E
Sbjct: 185 PDAGAFVSARVMHRQASHGREEEVAKVVEVLKRGKKRNPVL------VGDTVDVDAVVQE 238
Query: 216 SLAKIESKELDGVLKNVQIIRLDKDF----TCDKAGIVSKLKDLGALIETKFGNGDGVIL 271
+ I+ + L N ++I K+F D+A + +K+K+LG + + + GV++
Sbjct: 239 VITLIQRQRL----GNARVISFPKEFGDPVDMDRAQLTAKIKELGETVRSASSSA-GVVV 293
Query: 272 DLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLA-----EVVAEIGKLVARFGGGGGRLWLI 326
+LG+L+WLVE++ S + G Q++++ + V E+ +++ G G R+W+I
Sbjct: 294 NLGNLQWLVEEKCAS----HQGEQQEKRRDVVLDTARAAVDEMARVLNLSGEGEHRVWVI 349
Query: 327 GTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLS-----GMFPRLGSN-GILSSSVES 380
GTATC TY++CQVYHP +E++WDLQAVPI + P G+ P +G+N GILSSSVE
Sbjct: 350 GTATCATYMKCQVYHPGLESEWDLQAVPITPRPPPPPPPPLGLSPSVGANRGILSSSVEV 409
Query: 381 LSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSE 440
LS T + P + R S C C++ YE+E A E +SSE
Sbjct: 410 LS-------TAMTSSPMQ--------RAPSLCSACIEGYERERA------EMASSERAPC 448
Query: 441 VARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPS 500
A + WL G A++ + K +++ EL+++W D C H + P
Sbjct: 449 PAEQPMSLWLQIGTPSSGRPAPADRAQEKAREV------DELRRRWRDRCAQLHSHGRP- 501
Query: 501 SLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVSP 560
PL +N G T+ +NM + P R
Sbjct: 502 ----------PLVTCSEWN-------------------GATIL--ANMQAPPPVVRPSVQ 530
Query: 561 LNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPD 620
V TDL LG + +P
Sbjct: 531 PRGAVDTDLALGLAAA--------------------------------------RPACET 552
Query: 621 SFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L++ L E V WQ EAA+AVA T+ + + G +RRG D W++F GPD GK+
Sbjct: 553 DDKLLVRRLTEAVRWQPEAAAAVACTIAKARSGVARRRGKADV-DAWVVFAGPDVAGKRS 611
Query: 681 MASALSELVSGASPIMIPLG-PRR--DHEEPEVRVRGKTALDKIGEAVKRNPFSVILLED 737
MA ALS+ V G + + L P+ D E V RG+TALD++ EA++ NPF V++L+
Sbjct: 612 MAEALSKSVFGTGAVTVRLSWPQAGDDGGESVVSCRGQTALDRMAEAIRANPFRVVVLDG 671
Query: 738 IDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW---LPDSLKFLSQGITLD 794
+D AD VVRG+I RA+E GRL DS+GR+++LG IF++ + W LPD L SQ
Sbjct: 672 VDHADSVVRGSILRAIESGRLSDSHGRDVALGTNIFVVMSQWSPPLPDHLMRSSQEA--- 728
Query: 795 EKKLTSLASGEWQLRLS-IRGKTTKRRASWLDEEERSTKPRKETG-SGLSFDLNKA---- 848
E L L W L I G +R L+ +R TK RK + L DLN +
Sbjct: 729 EPFLPDL---PWNLEHGMITGGKKRRPEQLLEAGDRCTKARKHSAREPLPLDLNLSMSDD 785
Query: 849 -ADVGDDK--DGSHN-SSDLTVDHEEEHG---FTNRLLMTPSTSTPSQDLLNSVDSAIVF 901
D DD +GS N SSDLTV+HE+E+G ++ R P+ S +L+ +VD +VF
Sbjct: 786 HTDAVDDSGGEGSRNSSSDLTVEHEQEYGQPAYSARCSAPPTVS----ELIKAVDGVVVF 841
Query: 902 K-PVDFGRI-RRDVTNAIT---KKFSSIIGDALSIEILDEALEKLVGGVWLGRTG----- 951
K PV+ + +R V++ + KF I S+ + D L +L G G
Sbjct: 842 KPPVNLEPLMKRSVSDLVVPAANKFGEITVGGWSVHVDDSLLGRLAAGAARAAAGATAAT 901
Query: 952 -LEDWTEKVLVP-SLHQLKLRLPNNATAATDESATVRLELDDGSGSRSHGELLPSSIRVV 1009
+E WT +VL P S+ Q K L N + ATV +G G R E+ P + V
Sbjct: 902 PMEAWTGEVLCPSSIRQFKRSLSTNDV----DGATV-----EGGGRRKDSEMFP-MMPVT 951
Query: 1010 VEG 1012
V+G
Sbjct: 952 VDG 954
>gi|125602736|gb|EAZ42061.1| hypothetical protein OsJ_26621 [Oryza sativa Japonica Group]
Length = 733
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 290/781 (37%), Positives = 416/781 (53%), Gaps = 63/781 (8%)
Query: 248 IVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVA 307
+ +++ DLGA++E G GV+LDLGDLKWLV+ + + + + A
Sbjct: 1 MAARIGDLGAVVERLLGEHGGVVLDLGDLKWLVDGPAAAASEGGKAPVAENGAPSPSIRA 60
Query: 308 EIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPR 367
+ V R GG L + P + +G R
Sbjct: 61 R--RRVGRLHGGVHHLPPLQGLPPGDGGGLGPSKPC-----PIARGGAPIAAAAAGSALR 113
Query: 368 LGSNGILSSSVESLSPLKSAFQTTAAAL--PRRVSENLDPARRMSCCRQCLQNYEQELAK 425
G +GIL+SS+ LSP T AL P S+ PA + + C C +YE+ELAK
Sbjct: 114 PGGSGILNSSMGMLSPALRPMPVTPTALRWPPPGSDQ-SPAAKPAMCLLCKGSYERELAK 172
Query: 426 LSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKK 485
L E + + E A+P LP WL + +Q + K+Q+L K+ EL++K
Sbjct: 173 LEAE-QTDKPASRPEAAKPGLPHWLQLSN---------DQNKAKEQELKLKRSKDELERK 222
Query: 486 WNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLG-DTLQL 544
W +TC H S+ + VPL+ R P +PK+ + R TL++
Sbjct: 223 WRETCARIH-----SACPMAPALSVPLA-------TFTPRPPVEPKLGVARGAAVPTLKM 270
Query: 545 NSNMVSSQPA---ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPP 601
N + A E SP SPV+TDLVL R ++P + +
Sbjct: 271 NPSWEKPSVAPTLELRKSPPASPVKTDLVLCR------------LDPGTNPAVENEQKES 318
Query: 602 QNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAG 661
L Q ++ D +SFKRLLK L EKV WQ +AASA+A V QC+ G+GKRR G
Sbjct: 319 CEGLTALQKAKIAGISDIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNVG 378
Query: 662 SKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLG-----PRRDHEEPEVRVRGKT 716
++GDMWLLF+GPD+ GK+KM +ALSEL++ P+++ G R ++ P + GKT
Sbjct: 379 TRGDMWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFGGDSRLGRVGNDGPNMGFWGKT 438
Query: 717 ALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT 776
ALD++ EAV++NPFSVI+LE ID+ D+VV G IKRAME GRL DS GRE+SLGNVIF+LT
Sbjct: 439 ALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDSRGREVSLGNVIFVLT 498
Query: 777 ADWLPDSLKFLS-QGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRK 835
+W+P+ LK + + + E+++ S WQL LSI K K RA WL ++ R K K
Sbjct: 499 TNWVPEELKGSNVETLLRGEERMLESTSSSWQLELSIGDKQVKHRADWLCDDVRPAKLAK 558
Query: 836 ETGS--GLSFDLNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLN 893
E S GLS DLN A DD +GSHNSSD++V+ E+E G +L + ST P D+L
Sbjct: 559 ELSSSHGLSLDLNLAVGALDDTEGSHNSSDVSVEQEQEKG---QLAVKRSTPAPGSDILE 615
Query: 894 SVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGRTGLE 953
VD AIVF+PVDF R+ VT+ I+ KF S++G + S I ++A++ +VG VWL +E
Sbjct: 616 LVDDAIVFRPVDFTPFRKTVTDCISAKFESVMGSSSSFRIDEDAVDWMVGSVWLTDEKIE 675
Query: 954 DWTEKVLVPSLHQLKLRLPNNATAATDE-SATVRLELDDGSGSRSHGELLPSSIRVVVEG 1012
DW EKVL PS+ +L + +++ + +A L G R E LP ++ + ++G
Sbjct: 676 DWAEKVLKPSIERLWHNVKHDSGRSIIRLTAVAAKALPRWGGGR---EGLPVAVTIAIDG 732
Query: 1013 L 1013
+
Sbjct: 733 M 733
>gi|147865471|emb|CAN83664.1| hypothetical protein VITISV_031478 [Vitis vinifera]
Length = 828
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 284/821 (34%), Positives = 414/821 (50%), Gaps = 110/821 (13%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQ LT EAA V+ ++ A RR H Q TPLHVA T+LA+ +G LR AC++SH
Sbjct: 1 MRAGGCTVQQALTAEAAGVVKQAVTLARRRGHAQVTPLHVANTMLAATNGLLRTACLQSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGL-----DPPISNALMAALKRAQAHQRR 115
SHPLQC+ALELCF+VAL RLP + SP L P ISNAL+AA KRAQAHQRR
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASTS--SPMLGPHSQHPSISNALVAAFKRAQAHQRR 115
Query: 116 GCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSN 175
G E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VK+ +EQ++ S + +
Sbjct: 116 GSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAV--SLEICS 173
Query: 176 SSPIGLGFRPSSRNLYM---NPRLQQAGGVCGGQSEPE-------MVVRESLAKIESKEL 225
+P + + NL + +P + Q G G + P+ M VR + K++ ++
Sbjct: 174 QAP-SVSSKSKESNLLVLSQSPPMGQIGVKLGKPTVPDPVRNEDVMSVRGVMDKVDKGDV 232
Query: 226 DGVLKNVQIIRL--DKDF--TCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVE 281
L++V++I L DF + + G KL +L +L+++ G GVIL L DLKW
Sbjct: 233 PEALRDVKLISLPPSSDFWTSLQRRGPNRKLGELKSLVKSCVGR--GVILYLEDLKW--- 287
Query: 282 QQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYH 341
T + +S + + ++ E+GKLV F G GR WL+G AT +TY RC+ H
Sbjct: 288 --TTDYRASSSEQGRNYYCPVEHMIMELGKLVCGF-GENGRFWLMGIATFQTYSRCRTGH 344
Query: 342 PSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSE 401
PS+E W L + I A + + P S L+S F + A
Sbjct: 345 PSLETIWSLHPLTIPASSLALSLMPD--------------SDLQSQFSSKKAGSGTSNWL 390
Query: 402 NLD--PARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGD 459
L+ ++++CC C N+E E + +S S+ LP WL K
Sbjct: 391 MLEGGAEKQLTCCADCSANFENEARSI------PTSTCNSDSTTSTLPTWLQQYK----- 439
Query: 460 DKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPS--SLGHERIVPVPLSMTGL 517
D+ + + N DQD + ++L KKWN C + H H S +L + P +
Sbjct: 440 DENKKLSRN-DQDCV---AVRDLCKKWNSICSSAHKQPHSSEKTLTFSSLSPSSSTSGFS 495
Query: 518 YNS---NLLARQPFQPKVQLNRNLGDTLQLNSNMV--SSQPAERAVSPLNSPVRTDLVLG 572
Y+ NL P V+ ++ D S + + +P+ R P +S +
Sbjct: 496 YDQQYPNLHQTHQGWPVVEHKQSWRDNHFWVSEALNKTYEPSLRMYIPEHSDRKYASNPN 555
Query: 573 RSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEK 632
+ S+ + +E V+ F K L+ ++ L +L +K
Sbjct: 556 STPNSASSSDVMEMEYVQRF----------------------KELNAENLNTLCNALEKK 593
Query: 633 VWWQQEAASAVATTVTQCKLGNGKRRG----AGSKGDMWLLFMGPDRVGKKKMASALSEL 688
V WQ++ +A+T+ QC+ G +R+G + +K + W F G D K+K+A L+ L
Sbjct: 594 VPWQKDIIPDIASTILQCRSGMVRRKGKVKNSETKEETWFFFQGVDMDAKEKIARELARL 653
Query: 689 VSGASPIMIPLG------PRRDHEEPEVRVRGK-----TALDKIGEAVKRNPFSVILLED 737
V G+ + + R D E R + + +++ EAV NP V L ED
Sbjct: 654 VFGSQNNFVSIALSSFSSTRADSTEDLRNKRSRDEQSCSYIERFAEAVGSNPHRVFLAED 713
Query: 738 IDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+++AD + IKRA ERGR+ +S G EISL + I IL+ +
Sbjct: 714 VEQADYCSQMGIKRATERGRITNSNGEEISLSDAIIILSCE 754
>gi|225440714|ref|XP_002275038.1| PREDICTED: chaperone protein ClpB1-like [Vitis vinifera]
Length = 848
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 287/843 (34%), Positives = 416/843 (49%), Gaps = 134/843 (15%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQ LT EAA V+ ++ A RR H Q TPLHVA T+LA+ +G LR AC++SH
Sbjct: 1 MRAGGCTVQQALTAEAAGVVKQAVTLARRRGHAQVTPLHVANTMLAATNGLLRTACLQSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGL-----DPPISNALMAALKRAQAHQRR 115
SHPLQC+ALELCF+VAL RLP + SP L P ISNAL+AA KRAQAHQRR
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASTS--SPMLGPHSQHPSISNALVAAFKRAQAHQRR 115
Query: 116 GCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN-SSCS-- 172
G E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VK+ +EQ+++ CS
Sbjct: 116 GSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQA 175
Query: 173 --------------VSNSSPIG-----LGFRPSS-------------RNLYMNPRLQQAG 200
+S S P+G LG +P+ NL MN R +
Sbjct: 176 PSVSSKSKESNLLVLSQSPPMGQIGVKLG-KPTVPDPVRNEDVMSVIENL-MNKRRKNTV 233
Query: 201 GVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFTC---DKAGIVSKLKDLGA 257
V + E VVR + K++ ++ L++V++I L F+ + + KL +L +
Sbjct: 234 IVGECLATIEGVVRGVMDKVDKGDVPEALRDVKLISLPL-FSFGHHSREEVEQKLGELKS 292
Query: 258 LIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFG 317
L+++ G GVIL L DLKW T + +S + + ++ E+GKLV F
Sbjct: 293 LVKSCVGR--GVILYLEDLKW-----TTDYRASSSEQGRNYYCPVEHMIMELGKLVCGF- 344
Query: 318 GGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSS 377
G GR WL+G AT +TY RC+ HPS+E W L + I A + + P
Sbjct: 345 GENGRFWLMGIATFQTYSRCRTGHPSLETIWSLHPLTIPASSLALSLMPD---------- 394
Query: 378 VESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEV 437
S K+ T+ + +E ++++CC C N+E E + +S
Sbjct: 395 -SQFSSKKAGSGTSNWLMLEGGAE-----KQLTCCADCSANFENEARSI------PTSTC 442
Query: 438 KSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNF 497
S+ LP WL K D+ + + N DQD + ++L KKWN C + H
Sbjct: 443 NSDSTTSTLPTWLQQYK-----DENKKLSRN-DQDCV---AVRDLCKKWNSICSSAHKQP 493
Query: 498 HPS--SLGHERIVPVPLSMTGLYNS---NLLARQPFQPKVQLNRNLGDTLQLNSNMV--S 550
H S +L + P + Y+ NL P V+ ++ D S + +
Sbjct: 494 HSSEKTLTFSSLSPSSSTSGFSYDQQYPNLHQTHQGWPVVEHKQSWRDNHFWVSEALNKT 553
Query: 551 SQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQN 610
+P+ R P +S + + S+ + +E V+ F
Sbjct: 554 YEPSLRMYIPEHSDRKYASNPNSTPNSASSSDVMEMEYVQRF------------------ 595
Query: 611 DQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRG----AGSKGDM 666
K L+ ++ L +L +KV WQ++ +A+T+ QC+ G +R+G + +K +
Sbjct: 596 ----KELNAENLNTLCNALEKKVPWQKDIIPDIASTILQCRSGMVRRKGKVKNSETKEET 651
Query: 667 WLLFMGPDRVGKKKMASALSELVSGASPIMIPLG------PRRDHEEPEVRVRGK----- 715
W F G D K+K+A L+ LV G+ + + R D E R +
Sbjct: 652 WFFFQGVDMDAKEKIARELARLVFGSQNNFVSIALSSFSSTRADSTEDLRNKRSRDEQSC 711
Query: 716 TALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFIL 775
+ +++ EAV NP V L ED+++AD + IKRA ERGR+ +S G EISL + I IL
Sbjct: 712 SYIERFAEAVGSNPHRVFLAEDVEQADYCSQMGIKRATERGRITNSNGEEISLSDAIIIL 771
Query: 776 TAD 778
+ +
Sbjct: 772 SCE 774
>gi|15231233|ref|NP_190817.1| heat shock protein-like protein [Arabidopsis thaliana]
gi|4886278|emb|CAB43425.1| putative protein [Arabidopsis thaliana]
gi|44917467|gb|AAS49058.1| At3g52490 [Arabidopsis thaliana]
gi|332645430|gb|AEE78951.1| heat shock protein-like protein [Arabidopsis thaliana]
Length = 815
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 283/820 (34%), Positives = 419/820 (51%), Gaps = 118/820 (14%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T++Q LT +AA+V+ ++ A RR H Q TPLHVA+T+L++P+G LR AC++SH
Sbjct: 1 MRAGGCTVEQALTADAANVVKQAMGLARRRGHAQVTPLHVASTMLSAPTGLLRTACLQSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD----PPISNALMAALKRAQAHQRRG 116
+HPLQCRALELCF+VAL RLPT+ + G+ P ISNAL AA KRAQAHQRRG
Sbjct: 61 ---THPLQCRALELCFNVALNRLPTSTGSPMLGVPTSPFPSISNALGAAFKRAQAHQRRG 117
Query: 117 CPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN-SSCSVSN 175
E QQQP+LAVK+E+EQLIISILDDPSVSRVMREA FSSP VK +EQ+++ CS +
Sbjct: 118 SIESQQQPILAVKIEVEQLIISILDDPSVSRVMREAGFSSPQVKTKVEQAVSLEICSKTT 177
Query: 176 SSPI---GLGFRPSSRNLYMN-----PRLQQAGGVCGGQSEPEM--VVRESLAKIESKEL 225
SS G P MN ++ V G+ + VV+ + K++ K++
Sbjct: 178 SSSKPKEGKLLTPVRNEDVMNVINNLVDKKRRNFVIVGECLATIDGVVKTVMEKVDKKDV 237
Query: 226 DGVLKNVQIIRLDKDFTC----DKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVE 281
VLK+V+ I L F+ +A + KL++L L+++ G GVIL+LGDL W VE
Sbjct: 238 PEVLKDVKFITL--SFSSFGQPSRADVERKLEELETLVKSCVGK--GVILNLGDLNWFVE 293
Query: 282 QQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARF-GGGGGRLWLIGTATCETYLRCQVY 340
+ + N+ V+ ++ EIGKL G GR WL+G AT +TY+RC+
Sbjct: 294 SRTRGSSLYNNN---DSYCVVEHMIMEIGKLACGLVMGDHGRFWLMGLATSQTYVRCKSG 350
Query: 341 HPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVS 400
PS+E+ W L + I A SN + S V + + L + S
Sbjct: 351 QPSLESLWCLTTLTIPAT-----------SNSLRLSLV------------SESELEVKKS 387
Query: 401 ENLD-----PARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKA 455
EN+ + ++S C +C +E E F KSS+ S V LP WL K
Sbjct: 388 ENVSLQLQQSSDQLSFCEECSVKFESE-----ARFLKSSN---SNVTTVALPAWLQQYKK 439
Query: 456 HDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTC--LNQHPNFHPSSLGHERIVPVPLS 513
+ Q + D D I +EL KWN C +++ P+ +L +
Sbjct: 440 EN-------QNSHTDSDSI-----KELVVKWNSICDSIHKRPSLKTLTLSSPTSSFSGST 487
Query: 514 MTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGR 573
+ + L P ++ N T + +S + + + +S +T+LV
Sbjct: 488 QPSISTLHHLQTNGDWPVIETN-----THRHHSVVHETSHLRLFIPEHDSEQKTELVC-- 540
Query: 574 SKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ-KPLDPDSFKRLLKSLMEK 632
S P T ++SE + E ++ + K ++ ++ L +L K
Sbjct: 541 -----SNPNST-----------MNSEASSSDAMELEHASSRFKEMNAENLATLCAALESK 584
Query: 633 VWWQQEAASAVATTVTQCKLGNGKRRGAGS---KGDMWLLFMGPDRVGKKKMASALSELV 689
V WQ++ +A TV +C+ G+ R+ G+ K D W+ F G D K+K+A L++LV
Sbjct: 585 VPWQKDLVPELAKTVLKCRSGSSTRKINGNEDKKEDTWMFFQGLDVDAKEKIARELAKLV 644
Query: 690 SGA--SPIMIPLGPRRDHEEPEV------RVRGKTAL---DKIGEAVKRNPFSVILLEDI 738
G+ S + I L R+R + +L ++ EAV +P VIL+EDI
Sbjct: 645 FGSQDSFVSICLSSFSSTRSDSAEDLRNKRLRDEQSLSYIERFSEAVSLDPNRVILVEDI 704
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++AD + + KRA+ERGR+ +S G E SL + I IL+ +
Sbjct: 705 EQADYLSQVGFKRAVERGRVCNSSGEEASLKDAIVILSCE 744
>gi|51536536|gb|AAU05506.1| At3g52490 [Arabidopsis thaliana]
Length = 837
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 284/838 (33%), Positives = 419/838 (50%), Gaps = 132/838 (15%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T++Q LT +AA+V+ ++ A RR H Q TPLHVA+T+L++P+G LR AC++SH
Sbjct: 1 MRAGGCTVEQALTADAANVVKQAMGLARRRGHAQVTPLHVASTMLSAPTGLLRTACLQSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD----PPISNALMAALKRAQAHQRRG 116
+HPLQCRALELCF+VAL RLPT+ + G+ P ISNAL AA KRAQAHQRRG
Sbjct: 61 ---THPLQCRALELCFNVALNRLPTSTGSPMLGVPTSPFPSISNALGAAFKRAQAHQRRG 117
Query: 117 CPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN-SSCSVSN 175
E QQQP+LAVK+E+EQLIISILDDPSVSRVMREA FSSP VK +EQ+++ CS +
Sbjct: 118 SIESQQQPILAVKIEVEQLIISILDDPSVSRVMREAGFSSPQVKTKVEQAVSLEICSKTT 177
Query: 176 SSPI---GLGFRPSSRNLYMN-----PRLQQAGGVCGGQSEPEM--VVRESLAKIESKEL 225
SS G P MN ++ V G+ + VV+ + K++ K++
Sbjct: 178 SSSKPKEGKLLTPVRNEDVMNVINNLVDKKRRNFVIVGECLATIDGVVKTVMEKVDKKDV 237
Query: 226 DGVLKNVQIIRL-------------DKDFTCDKAGIVSKLKDLGALIETKFGN------- 265
VLK+V+ I L ++ +A + KL++L A +E K
Sbjct: 238 PEVLKDVKFITLSFSSFGQPSRADVERKLEELEADVERKLEELEADVERKLEELETLVKS 297
Query: 266 --GDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARF-GGGGGR 322
G GVIL+LGDL W VE + + N+ V+ ++ EIGKL G GR
Sbjct: 298 CVGKGVILNLGDLNWFVESRTRGSSLYNNN---DSYCVVEHMIMEIGKLACGLVMGDHGR 354
Query: 323 LWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLS 382
WL+G AT +TY+RC+ PS+E+ W L + I A SN + S V
Sbjct: 355 FWLMGLATSQTYVRCKSGQPSLESLWCLTTLTIPAT-----------SNSLRLSLV---- 399
Query: 383 PLKSAFQTTAAALPRRVSENLD-----PARRMSCCRQCLQNYEQELAKLSKEFEKSSSEV 437
+ + L + SEN+ + ++S C +C +E E F KSS+
Sbjct: 400 --------SESELEVKKSENVSLQLQQSSDQLSFCEECSVKFESE-----ARFLKSSN-- 444
Query: 438 KSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTC--LNQHP 495
S V LP WL K + Q + D D I +EL KWN C +++ P
Sbjct: 445 -SNVTTVALPAWLQQYKKEN-------QNSHTDSDSI-----KELVVKWNSICDSIHKRP 491
Query: 496 NFHPSSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAE 555
+ +L + + + L P ++ N T + +S + +
Sbjct: 492 SLKTLTLSSPTSSFSGSTQPSISTLHHLQTNGDWPVIETN-----THRHHSVVHETSHLR 546
Query: 556 RAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ- 614
+ +S +T+LV S P T ++SE + E ++ +
Sbjct: 547 LFIPEHDSEQKTELVC-------SNPNST-----------MNSEASSSDAMELEHASSRF 588
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGS---KGDMWLLFM 671
K ++ ++ L +L KV WQ++ +A TV +C+ G+ R+ G+ K D W+ F
Sbjct: 589 KEMNAENLATLCAALESKVPWQKDLVPELAKTVLKCRSGSSTRKINGNEDKKEDTWMFFQ 648
Query: 672 GPDRVGKKKMASALSELVSGA--SPIMIPLGPRRDHEEPEV------RVRGKTAL---DK 720
G D K+K+A L++LV G+ S + I L R+R + +L ++
Sbjct: 649 GLDVDAKEKIARELAKLVFGSQDSFVSICLSSFSSTRSDSAEDLRNKRLRDEQSLSYIER 708
Query: 721 IGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
EAV +P VIL+EDI++AD + + KRA+ERGR+ +S G E SL + I IL+ +
Sbjct: 709 FSEAVSLDPNRVILVEDIEQADYLSQVGFKRAVERGRVCNSSGEEASLKDAIVILSCE 766
>gi|297735465|emb|CBI17905.3| unnamed protein product [Vitis vinifera]
Length = 974
Score = 345 bits (886), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 357/1100 (32%), Positives = 495/1100 (45%), Gaps = 222/1100 (20%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQTLT EAASVL HS++ A RR H Q TPLHVAATLL+S + LR+AC+KS
Sbjct: 1 MRAGACTLQQTLTTEAASVLKHSLSLARRRGHAQVTPLHVAATLLSSRASLLRRACLKSQ 60
Query: 61 PN-SSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
PN S+HPLQCRALELCF+VAL RLPT + G P +SNAL+AALKRAQAHQRRGC E
Sbjct: 61 PNQSTHPLQCRALELCFNVALNRLPTTPGPLLHG-QPSLSNALIAALKRAQAHQRRGCIE 119
Query: 120 -QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSC----SVS 174
QQQQPLL +KVELEQLIISILDDPSVSRVMREA FSS AVK +E S SS ++
Sbjct: 120 QQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKNNLEDSSASSVFQCYNII 179
Query: 175 NSSPIG-------------LGFRPSSRNLYMNP-------------------RLQQAGGV 202
N S L F P + L NP R ++ V
Sbjct: 180 NPSTFWQTHILAYSSEQNPLLFSP-QKKLSSNPITDSTSVKEDLKLVLEVLLRKKRRNTV 238
Query: 203 CGGQ--SEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFT------CDKAGIVSKLKD 254
G S E +V E + +IE E+ LK+ ++ F+ + + L D
Sbjct: 239 IVGDSVSTTEGLVAELMGRIERGEVPEELKSAHFVKF--QFSPVTLRFMKREEVEMNLSD 296
Query: 255 LGALIET-KFGNGDGVILDLGDLKWLVEQQVTSF--GVPNSGTLQQQQQVLAEVVAEIGK 311
L +++ G G G I+ GDLKW VE V+ G PN + +VAEIG+
Sbjct: 297 LKRKVDSLASGGGGGAIIYAGDLKWTVEAAVSDRDGGFPNGEA--SAYNPIDHLVAEIGR 354
Query: 312 LVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSN 371
L++ + R+WL+ TA+ +TY+RCQ+ PS+E W LQAV + P G+ L ++
Sbjct: 355 LLSDYTTSNTRVWLMATASYQTYMRCQMKQPSLEIQWALQAVSV----PSGGLGLSLHAS 410
Query: 372 GILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFE 431
+ S S + +T P E D ++SCC +C NYE+E+ +
Sbjct: 411 SVHDS--RSQNQAHHVLETK----PFAAKEEHD---KLSCCAECTANYEKEVGLFKSGQQ 461
Query: 432 KSSSEVKSEVARPLLPQWL--HNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDT 489
K LLP WL H +A DD EL++KWN
Sbjct: 462 K------------LLPSWLQAHGVEARQKDDLV------------------ELRRKWNRL 491
Query: 490 C--LNQHPNFHPSSL----GHERIVPVPLSMTGLYNSNLLARQP--FQPKVQLNRNLGDT 541
C L+Q + SS I P L+ NS L P+ + ++
Sbjct: 492 CHSLHQGSYSYTSSYPWWPNQNSIFP-DLNSISFTNSALKPNHASSLVPRFRRQQSCHIE 550
Query: 542 LQLNSNMVSSQPAERAVSPLNSP----VRTDLVLGRSKVLESAPEKTHIEPVKDFLGCIS 597
+ M Q E ++ L V+ L LG S +S
Sbjct: 551 FSFGNGMHKQQSVEPSLDCLKKTEGKDVKITLALGTSVYSDSG----------------- 593
Query: 598 SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR 657
KL E + ++ + D + K L E V WQ EA S +A + K
Sbjct: 594 ------KLPELKGEKTIRLRD------ICKLLEENVPWQSEAISPIAEALIDSK------ 635
Query: 658 RGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTA 717
SK + WLL G D +GK+++A A++E V G++ ++ + R+ G T
Sbjct: 636 ---SSKKETWLLLQGNDSIGKRRLAHAIAESVFGSADLVFRMNMRKLDN-------GVTP 685
Query: 718 LDKI-GEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT 776
+I EA++ + V+++ED+D A+ + E G DS RE S G IFILT
Sbjct: 686 CSEILTEALRAHQKLVVMVEDVDFAEPQFMKFLADGCETGEFRDSSKREGSFGQAIFILT 745
Query: 777 ADWLPDSLKFLSQGITLDEKK--LTSLASGEWQLRLSIRGKTT-----KRRASWLDEEER 829
DS + E+K +S+ + Q+ L+I T KR+A L E
Sbjct: 746 TG---DSSSY-------QERKGNKSSVIHMKLQINLTIPTLGTPNMDHKRKADCLISVEP 795
Query: 830 STKPRKETGSGLSF---DLNKAADVGDD-----KDGSHNSSDLT----VDHEEEHGFTNR 877
E LSF DLN AD D+ ++ S SSDLT D + HGF
Sbjct: 796 GNSKILEFTRQLSFNTLDLNIRADEDDESKDKPRELSPISSDLTRETATDIQNPHGF--- 852
Query: 878 LLMTPSTSTPSQDLLNSVDSAIVFK-PVDFGRIRRDVTNAITKKFSSIIGDA---LSIEI 933
L S+++ FK D R R+ + K + D+ +S +
Sbjct: 853 --------------LESIENRFTFKRKADQDREMREAFLSKIKGSFEVGYDSENTVSFSV 898
Query: 934 LDEALEKLVGGV-WLGRTGLEDWTEKVLVPSLHQLKLRLPNNATAATDESATVRLEL--- 989
+ LE+++ G + E W ++V S+ +K+ E VRL L
Sbjct: 899 EQKLLEEVLAGCDSFLNSLFEKWLKEVFQTSVKTVKI--------GGKEGMEVRLRLVGK 950
Query: 990 -DDGSGSRSHGELLPSSIRV 1008
+ G G LP I+V
Sbjct: 951 GEKGLEDGFMGSSLPKKIQV 970
>gi|359485128|ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247938 [Vitis vinifera]
Length = 1045
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 355/1147 (30%), Positives = 510/1147 (44%), Gaps = 245/1147 (21%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQTLT EAASVL HS++ A RR H Q TPLHVAATLL+S + LR+AC+KS
Sbjct: 1 MRAGACTLQQTLTTEAASVLKHSLSLARRRGHAQVTPLHVAATLLSSRASLLRRACLKSQ 60
Query: 61 PN-SSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
PN S+HPLQCRALELCF+VAL RLPT + G P +SNAL+AALKRAQAHQRRGC E
Sbjct: 61 PNQSTHPLQCRALELCFNVALNRLPTTPGPLLHG-QPSLSNALIAALKRAQAHQRRGCIE 119
Query: 120 -QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSP 178
QQQQPLL +KVELEQLIISILDDPSVSRVMREA FSS AVK +E S SS SS
Sbjct: 120 QQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKNNLEDSSASSVFQCYSSS 179
Query: 179 IGLGFRPSS-------RNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKIESKELDGV--- 228
G+ P S R++ +NP + SE ++ K+ S +
Sbjct: 180 GGVFSSPCSPSPTETHRDI-INPSTFWQTHILAYSSEQNPLLFSPQKKLSSNPITDSTSV 238
Query: 229 ---LKNVQIIRLDK---------DFTCDKAGIVSKL-------------------KDLGA 257
LK V + L K D G+V++L K +
Sbjct: 239 KEDLKLVLEVLLRKKRRNTVIVGDSVSTTEGLVAELMGRIERGEVPEELKSAHFVKFQFS 298
Query: 258 LIETKFGNGDGVILDLGDLK----------------------WLVEQQVTSF--GVPNSG 293
+ +F + V ++L DLK W VE V+ G PN
Sbjct: 299 PVTLRFMKREEVEMNLSDLKRKVDSLASGGGGGAIIYAGDLKWTVEAAVSDRDGGFPNGE 358
Query: 294 TLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAV 353
+ +VAEIG+L++ + R+WL+ TA+ +TY+RCQ+ PS+E W LQAV
Sbjct: 359 A--SAYNPIDHLVAEIGRLLSDYTTSNTRVWLMATASYQTYMRCQMKQPSLEIQWALQAV 416
Query: 354 PIAAKTPLSGMFPRLGSNGILSSS---VESLSPLKSAFQTTAAAL----PRRVSENLDPA 406
+ P G+ L ++ +++ + E +S S Q A + P E D
Sbjct: 417 SV----PSGGLGLSLHASSLINKAEDHCEKVSVHDSRSQNQAHHVLETKPFAAKEEHD-- 470
Query: 407 RRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWL--HNAKAHDGDDKTAE 464
++SCC +C NYE+E+ +K LLP WL H +A DD
Sbjct: 471 -KLSCCAECTANYEKEVGLFKSGQQK------------LLPSWLQAHGVEARQKDDLV-- 515
Query: 465 QTENKDQDLIWKQKSQELQKKWNDTCLNQHP------NFHPSSLGHERIVPVPLSMTGLY 518
EL++KWN C + H + S ++ ++ S T Y
Sbjct: 516 ----------------ELRRKWNRLCHSLHQGRSNQNHLSSSMFSNQNLLGKSYSYTSSY 559
Query: 519 ----NSNLL------------ARQP-----FQPKVQLNRNLGDTLQLNSNMVSSQPAERA 557
N N + A +P P+ + ++ + M Q E +
Sbjct: 560 PWWPNQNSIFPDLNSISFTNSALKPNHASSLVPRFRRQQSCHIEFSFGNGMHKQQSVEPS 619
Query: 558 VSPLNSP----VRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQL 613
+ L V+ L LG S +S KL E + ++
Sbjct: 620 LDCLKKTEGKDVKITLALGTSVYSDSG-----------------------KLPELKGEKT 656
Query: 614 QKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGP 673
+ D + K L E V WQ EA S +A + K SK + WLL G
Sbjct: 657 IRLRD------ICKLLEENVPWQSEAISPIAEALIDSK---------SSKKETWLLLQGN 701
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKI-GEAVKRNPFSV 732
D +GK+++A A++E V G++ ++ + R+ G T +I EA++ + V
Sbjct: 702 DSIGKRRLAHAIAESVFGSADLVFRMNMRKLD-------NGVTPCSEILTEALRAHQKLV 754
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGIT 792
+++ED+D A+ + E G DS RE S G IFILT DS +
Sbjct: 755 VMVEDVDFAEPQFMKFLADGCETGEFRDSSKREGSFGQAIFILTTG---DSSSY------ 805
Query: 793 LDEKK--LTSLASGEWQLRLSIRGKTT-----KRRASWLDEEERSTKPR--KETGSGL-S 842
E+K +S+ + Q+ L+I T KR+A W D R+ PR +E GS L S
Sbjct: 806 -QERKGNKSSVIHMKLQINLTIPTLGTPNMDHKRKAEW-DLSNRTKSPRTDEEEGSCLIS 863
Query: 843 FDLNKAADVGDDKDGSHNSSDLTV--DHEEEHGFTNRLL------MTPSTSTPSQD---L 891
+ + + + S N+ DL + D ++E R L +T T+T Q+
Sbjct: 864 VEPGNSKILEFTRQLSFNTLDLNIRADEDDESKDKPRELSPISSDLTRETATDIQNPHGF 923
Query: 892 LNSVDSAIVFK-PVDFGRIRRDVTNAITKKFSSIIGDA---LSIEILDEALEKLVGGV-W 946
L S+++ FK D R R+ + K + D+ +S + + LE+++ G
Sbjct: 924 LESIENRFTFKRKADQDREMREAFLSKIKGSFEVGYDSENTVSFSVEQKLLEEVLAGCDS 983
Query: 947 LGRTGLEDWTEKVLVPSLHQLKLRLPNNATAATDESATVRLELDDGSGSRS-----HGEL 1001
+ E W ++V S+ +K+ E VRL L G G + G
Sbjct: 984 FLNSLFEKWLKEVFQTSVKTVKI--------GGKEGMEVRLRL-VGKGEKGLEDGFMGSS 1034
Query: 1002 LPSSIRV 1008
LP I+V
Sbjct: 1035 LPKKIQV 1041
>gi|297745889|emb|CBI15945.3| unnamed protein product [Vitis vinifera]
Length = 955
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 298/1019 (29%), Positives = 485/1019 (47%), Gaps = 148/1019 (14%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +S +Q LT EAA L+ ++ A RR+H QTT LH + LLA PS LR AC ++
Sbjct: 1 MPTPVSIARQCLTDEAARALDDAVGVARRRSHAQTTSLHAISALLAFPSSTLRDACARAR 60
Query: 61 PNSSHP-LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
++ P LQ RALEL V+L+RLP+++ +PP+SN+LMAA+KR+QA QRR PE
Sbjct: 61 SSAYSPRLQFRALELSVGVSLDRLPSSKALE----EPPVSNSLMAAIKRSQASQRRH-PE 115
Query: 120 -----QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK-ATIEQSLNSS--- 170
QQ Q ++VEL+ I+SILDDP VSRV EA F S +K A I+ L+
Sbjct: 116 NFHLQQQNQTASFLRVELKHFILSILDDPIVSRVFGEAGFRSCDIKIAMIQPPLSPVSRF 175
Query: 171 ----------CSVSNSSPIGLGFRPSSRNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKI 220
C++++S P +R + P +G G E + E L +
Sbjct: 176 PRTRCPPIFLCNLTDSDP--------ARRTFSFPFAGVSGS--GDGDENSRRIGEVLTRK 225
Query: 221 ESKE--LDGV-----LKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKFGNGDGVILDL 273
K L GV L+ + + + DK G+ KLK+LG + E +G G+ ++
Sbjct: 226 TGKNPLLIGVCSSDALRCFADCFVGRGGSEDKLGL--KLKELGHMAEQY--SGPGIAVNF 281
Query: 274 GDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTA-TCE 332
G+LK LV + + VV+++ L+ LWL+G++ + E
Sbjct: 282 GELKALVGDDAPG-------------EAASFVVSKLTSLLK----AHPNLWLMGSSGSYE 324
Query: 333 TYLRCQVYHPSMENDWDLQAVPI-AAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTT 391
TYL+ PS+E DWDL +PI ++++ + G R SS + S P F T
Sbjct: 325 TYLKFLTQFPSIEEDWDLHLLPITSSRSSVEGFCSR-------SSLMGSFVPFAGFFST- 376
Query: 392 AAALPRRVSENLDPARR-MSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWL 450
P L+ + ++ C C + EQE++ + K S+ ++ LP WL
Sbjct: 377 ----PTDFKNPLNSTNQSITLCHLCNEKCEQEVSAILK---GGSTISLADRYSGTLPSWL 429
Query: 451 HNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSLGHERIVPV 510
A +K A+ + KD K +QKKW D C H H PV
Sbjct: 430 --LMAEPDTNKGADAVKAKDDGRALNDKVLGVQKKWYDICQRLH---HAPPYPKSIFQPV 484
Query: 511 PLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLV 570
P Q P V + ++ +L ++ S+ E SP SP
Sbjct: 485 P--------------QIPLPVVSESESVNFQSKLAGSVSKSKQVETRSSPWFSPCPL--- 527
Query: 571 LGRSKVLESAPEKTHIEPVKDF-----LGCISSEPPQN------KLHESQNDQLQKPLDP 619
L AP++T + LG + + Q + H+ + + +D
Sbjct: 528 ----PNLSLAPDRTSSSCITSVTTDLGLGTLYASNSQETKRLNLQGHKERMNYFSGQMDA 583
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKK 679
FK L ++L KV WQ EA A++ TV+ C+ GN +R G+ KGD+WL F+GPD+VGKK
Sbjct: 584 RDFKSLWRALASKVGWQDEAICAISQTVSSCRTGNARRHGSNLKGDIWLSFLGPDKVGKK 643
Query: 680 KMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDID 739
++A+AL+E++ +S ++ + H + RGKT D I +++ P V+ LE+ID
Sbjct: 644 RIAAALAEIMFRSSKSLVSVDLGYQHG----KFRGKTITDYIAGELRKKPQLVVFLENID 699
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLS--QGITLDEKK 797
+AD++V+ ++ +A+ G+ DS+GREIS+ ++IF+ TA + +S + + E++
Sbjct: 700 KADLLVQTSLSQAIRTGKFPDSHGREISINHMIFVTTATSKKGNRNLVSGKEPVEFSEER 759
Query: 798 LTSLASGEWQLRLSIRGKTTK-RRASWLDEE---ERSTKPRKETGSGLSFDLNKAADVGD 853
+ L + WQ+++ I T + R++ ++++ E S + K + S L DLN + +
Sbjct: 760 I--LGAKSWQMKILIGCVTGEASRSNGMNQDKYLEMSKRACKASNSYL--DLNLPVEELE 815
Query: 854 DKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDV 913
+ S N ++ E ++ L+ +D + FKP +F + + +
Sbjct: 816 EDVDSANCDSDSLSESSEAWL--------------EEFLDQMDEKVTFKPFNFDAVAQKL 861
Query: 914 TNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGRTG--LEDWTEKVLVPSLHQLKLR 970
I+ F IIG + +EI E + +++ WL G ++DW E+VL S + + R
Sbjct: 862 LKEISLNFQKIIGSDIQLEIDSEVMVQILAAAWLSEKGGAVDDWVEQVLSKSFTEARQR 920
>gi|255585368|ref|XP_002533380.1| conserved hypothetical protein [Ricinus communis]
gi|223526773|gb|EEF28998.1| conserved hypothetical protein [Ricinus communis]
Length = 1112
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 317/1109 (28%), Positives = 516/1109 (46%), Gaps = 203/1109 (18%)
Query: 7 TIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHP 66
T +Q LTPEAA L+ +++ A RR H QTT LH + LL+ PS LR AC+++ ++ P
Sbjct: 7 TARQCLTPEAAHALDEAVSVARRRGHSQTTSLHAVSALLSIPSSILRDACVRARNSAYTP 66
Query: 67 -LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE-----Q 120
LQ +ALELC SV+L+R+P +Q + DPP+SN+LMAA+KR+QA+QRR PE Q
Sbjct: 67 RLQFKALELCLSVSLDRVPASQLSEQ---DPPVSNSLMAAIKRSQANQRRQ-PENFHLYQ 122
Query: 121 QQQ----PLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSS------ 170
QQQ + +KVEL+ LI+SILDDP VSRV E+ F S +K I + L
Sbjct: 123 QQQCSTTSVSCIKVELQNLILSILDDPVVSRVFGESGFRSSEIKLAIVRPLPQVLRLSQR 182
Query: 171 --------CSVSNSSPIGLGFRPSS----------------------RNLYMNPRLQQAG 200
C++S+ S G G R S RN NP L
Sbjct: 183 FRGPPMFLCNLSDHSDPGPGRRGFSFPFFSGFTDGDENCRRIGEVLVRNKGRNPLLV--- 239
Query: 201 GVCGGQSEPEMVVRESLAKIESKELDGV----LKNVQIIRLDKDF------TCDKAGIVS 250
GVC + S ++ K D V L +++I ++ D DK +
Sbjct: 240 GVCAYDT------LASFNQLVEKRKDYVLPVELSGLRVICIESDVMKFASENFDKGCVDL 293
Query: 251 KLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIG 310
+ +++G +E G G++++LGDLK + + + ++G +++ +V ++
Sbjct: 294 RFEEVGRFVEQNL--GPGLVVNLGDLKAFISSE-NDYSNSSNGL----NDLMSYIVEKLT 346
Query: 311 KLVARFGGGGGRLWLIG-TATCETYLRCQVYHPSMENDWDLQAVPIAA-KTPLSGMFPRL 368
+++ + G ++WLIG TA+ E YL+ PS+E DWDLQ +PI + +T + PR
Sbjct: 347 RMLQLY---GRKVWLIGTTASYEGYLKFVSRFPSVEKDWDLQLLPITSFRTSMPESCPR- 402
Query: 369 GSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARR-MSCCRQCLQNYEQELAKLS 427
SS +ES P F T P ++ +L + + +S C C + EQE+ +S
Sbjct: 403 ------SSLMESFIPFGGFFST-----PSELNGSLSSSYQCISRCHLCNEKCEQEVLAVS 451
Query: 428 KEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWN 487
K +S ++ + LP WL A+ G +K + D D++ K LQKKW+
Sbjct: 452 KGGCVASV---ADQYQSNLPSWLQMAEL--GTNKGLDVKTRDDGDVL-SAKVAGLQKKWD 505
Query: 488 DTCLNQH----------PNFHPSSLGHERI--------------------------VP-- 509
C H P+ P+ +G + + VP
Sbjct: 506 SICWRLHLTRPQGSNTLPSGFPTVVGFQLVEDKKDDAEKGSSNNTNAPLDGNRCMNVPID 565
Query: 510 ----------VPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVS 559
VPLS + N+ + + K + + + G + + S RA
Sbjct: 566 LQKISRRQLGVPLSAASVANTESVKQWERPSKEEDHESDGLRSPCSYSNSSIADGNRASP 625
Query: 560 PLNSPVRTDLVLGRSKVLESA----PEKTH-IEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
+ V TDL L S + S PE H +E +D G S P + ++ S +D L
Sbjct: 626 TSATSVTTDLGLRISPISTSYDTKKPENKHYVELSRDLSGSFS--PNNDVINGSISDHLA 683
Query: 615 -----------KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSK 663
+ DP SFK L+++L EKV Q EA ++ T+ + N + +G+ K
Sbjct: 684 HSSSFSSLDIGRQFDPTSFKMLVRALTEKVSCQDEAVHLISQTIAHYRTRNERHQGSSLK 743
Query: 664 GDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP--LGPRRD----HEEP----EVRVR 713
D+W F+GPDR K+K+A+AL+E++ G+S +I L P+ H E +V R
Sbjct: 744 RDIWFNFLGPDRCSKRKIAAALAEIIFGSSENLISADLSPQDGIVNMHSEEVHAYDVMFR 803
Query: 714 GKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIF 773
GKT +D + + + P +V+ LE++D+AD+ + ++ RA+ G+ DS+GRE+ + N IF
Sbjct: 804 GKTIIDYVAGELGKKPLAVVFLENVDKADVQAQNSLSRAIRTGKFSDSHGREVGINNAIF 863
Query: 774 ILTADWLPD-SLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTK 832
+ T+ D L T E+++ + Q+ I ++ L+ K
Sbjct: 864 VTTSTLGDDKKLSSTKDFSTYSEERILRIKGQPMQML--IEQAPAEKMVQNLNHSPVMRK 921
Query: 833 ---------PRKETGSGLSFDLNKAADVGDDKDGSHNSS----DLTVDHEE------EHG 873
RK G+ + + +K ++V +H +S DL + EE E+G
Sbjct: 922 VPSSSVFVNKRKLVGANQNVNRHKTSEVAKR---AHKTSSRYLDLNLPAEENDMQIIENG 978
Query: 874 FTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEI 933
++ M+ ++ QD L+ +D +VFKP DF + + I F I+G ++I
Sbjct: 979 DSDNDSMSSNSKAWLQDFLDQLDRIVVFKPFDFDALGERILTGINDSFHKIVGSECLLDI 1038
Query: 934 LDEALEKLVGGVWLG--RTGLEDWTEKVL 960
+ E+L+ +L + +E+W E+VL
Sbjct: 1039 DSKVTEQLLAAAYLSPRKRVVEEWMEQVL 1067
>gi|147803027|emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]
Length = 1032
Score = 331 bits (848), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 347/1101 (31%), Positives = 489/1101 (44%), Gaps = 240/1101 (21%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQTLT EAASVL HS++ A RR H Q TPLHVAATLL+S + LR+AC+KS
Sbjct: 1 MRAGACTLQQTLTTEAASVLKHSLSLARRRGHAQVTPLHVAATLLSSRASLLRRACLKSQ 60
Query: 61 PN-SSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
PN S+HPLQCRALELCF+VAL RLPT + G P +SNAL+AALKRAQAHQRRGC E
Sbjct: 61 PNQSTHPLQCRALELCFNVALNRLPTTPGPLLHG-QPSLSNALIAALKRAQAHQRRGCIE 119
Query: 120 -QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSP 178
QQQQPLL +KVELEQLIISILDDPSVSRVMREA FSS AVK +E S SS SS
Sbjct: 120 QQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKNNLEDSSASSVFQCYSSS 179
Query: 179 IGLGFRPSS-------RNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKIESKELDGV--- 228
G+ P S R++ +NP + SE ++ K+ S +
Sbjct: 180 GGVFSSPCSPSPTETHRDI-INPSTFWQTHILAYSSEQNPLLFSPQKKLSSNTITDSTSV 238
Query: 229 ---LKNVQIIRLDK---------DFTCDKAGIVSKL-------------------KDLGA 257
LK V + L K D G+V++L K +
Sbjct: 239 KEDLKLVLEVLLRKKRRNTVIVGDSVSTTEGLVAELMGRIERGEVPEELKSAHFVKFQFS 298
Query: 258 LIETKFGNGDGVILDLGDLK----------------------WLVEQQVTS----FGVPN 291
+ +F + V ++L DLK W VE V+ F
Sbjct: 299 PVTLRFMKREEVEMNLSDLKRKVDSLASGGGGGAIIYAGDLKWTVEAAVSDRDGGFPSGE 358
Query: 292 SGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQ 351
+ ++AE+ G+L++ + R+WL+ TA+ +TY+RCQ+ PS+E W LQ
Sbjct: 359 ASAYNPIDHLVAEI----GRLLSDYTTSNTRVWLMATASYQTYMRCQMKQPSLEIQWALQ 414
Query: 352 AVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSC 411
AV + P G+ L ++ + S S + +T P E D ++SC
Sbjct: 415 AVSV----PSGGLGLSLHASSVHDS--RSQNQAHHVLETK----PFAAKEEHD---KLSC 461
Query: 412 CRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWL--HNAKAHDGDDKTAEQTENK 469
C +C NYE+E+ +K LLP WL H +A DD
Sbjct: 462 CAECTANYEKEVGLFKSGQQK------------LLPSWLQAHGVEARQKDDLV------- 502
Query: 470 DQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQ--- 526
EL++KWN C + H S+ H LS + N NLL +
Sbjct: 503 -----------ELRRKWNRLCHSLHQG--RSNQNH-------LSSSMFSNQNLLGKSYSY 542
Query: 527 ----PFQPKVQ-----LNRNLGDTLQLNSNMVSS-QPAERAVSPLNSPVRTDLVLGRSKV 576
P+ P LN L N SS P R + V+ + +
Sbjct: 543 TSSYPWWPNQNSIFPDLNSISFTNSALKPNHASSLVPRFRRQQSCHIEFSFGNVMHKQQS 602
Query: 577 LESAPE---KTHIEPVKDFLGC-ISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEK 632
+E + + KT + VK L S KL E + ++ + D + K L E
Sbjct: 603 VEPSLDCLKKTEGKDVKITLALGTSVYSDSGKLPELKGEKTIRLRD------ICKLLEEN 656
Query: 633 VWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGA 692
V WQ EA S +A + K SK + WLL G D +GK+++A A++E V G+
Sbjct: 657 VPWQSEAISPIAEALIDSK---------SSKKETWLLLQGNDSIGKRRLAHAIAESVFGS 707
Query: 693 SPIMIPLGPRRDHEEPEVRVRGKTALDKI-GEAVKRNPFSVILLEDIDEADMVVRGNIKR 751
+ ++ + R+ G T +I EA++ + V+++ED+D A+ +
Sbjct: 708 ADLVFRMNMRKLDN-------GVTPCSEILTEALRAHQKLVVMVEDVDFAEPQFMKFLAD 760
Query: 752 AMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKK--LTSLASGEWQLR 809
E G DS RE S G IFILT DS + E+K +S+ + Q+
Sbjct: 761 GCETGEFRDSSKREGSFGQAIFILTTG---DSSSY-------QERKGNKSSVIHMKLQIN 810
Query: 810 LSIRGKTT-----KRRASWLDEEERSTKPR--KETGSGL--------------------S 842
L+I T KR+A W D R+ PR +E GS L +
Sbjct: 811 LTIPTLGTPNMDHKRKAEW-DLSNRTKSPRTDEEEGSCLISVEPGNSKILEFTRQLSFNT 869
Query: 843 FDLNKAADVGDD-----KDGSHNSSDLT----VDHEEEHGFTNRLLMTPSTSTPSQDLLN 893
DLN AD D+ ++ S SSDLT D + HGF L
Sbjct: 870 LDLNIRADEDDESKDKPRELSPISSDLTRETATDIQNPHGF-----------------LE 912
Query: 894 SVDSAIVFK-PVDFGRIRRDVTNAITKKFSSIIGDA---LSIEILDEALEKLVGGV-WLG 948
S+++ FK D R R+ + K + D+ +S + + LE+++ G
Sbjct: 913 SIENRFTFKRKADQDREMREAFLSKIKGSFEVGYDSENTVSFSVEQKLLEEVLAGCDSFL 972
Query: 949 RTGLEDWTEKVLVPSLHQLKL 969
+ E W ++V S+ +K+
Sbjct: 973 NSLFEKWLKEVFQTSVKTVKI 993
>gi|225464404|ref|XP_002269046.1| PREDICTED: uncharacterized protein LOC100254987 [Vitis vinifera]
Length = 840
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 268/831 (32%), Positives = 400/831 (48%), Gaps = 120/831 (14%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG+ ++QQ LT +AAS++ ++ A RR H Q TPLHVA+ +LAS SG LR AC++SH
Sbjct: 1 MRAGVCSVQQVLTADAASMVKQAVTLARRRGHAQVTPLHVASVMLASSSGLLRSACLRSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGL-----DPPISNALMAALKRAQAHQRR 115
SHPLQC+ALELCF+VAL RLP + SP L P +SNAL+AA KRAQAHQRR
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASSS--SPLLAPHSSHPSLSNALVAAFKRAQAHQRR 115
Query: 116 GCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSN 175
E QQQP+LA+KVE+EQLIISIL DPSVSRVMREA FSS ++ IEQ++ S V +
Sbjct: 116 ASIENQQQPILALKVEIEQLIISILHDPSVSRVMREAGFSSTQLRTNIEQAV--SLDVCS 173
Query: 176 SSPIGLGFRPSSRNLYMNPRLQQA------------------GGVCGGQS--EPEMVVRE 215
SP S+ + +N +A V G++ E VVR
Sbjct: 174 QSP---AVSSLSKEITLNNPFDEAQEEDVKSLLDAFTSKRRRNTVVVGETLASAEGVVRG 230
Query: 216 SLAKIESKELDGVLKNVQIIRLD----KDFTCDKAGIVSKLKDLGALIETKFGNGDGVIL 271
+ K E ++ G L+ VQ I L K+ + K + KL L L+++ G V+L
Sbjct: 231 LMNKFERGDVPGDLRYVQFISLPLFSLKNLS--KEEVEQKLVKLTCLLKSYVCRG--VVL 286
Query: 272 DLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATC 331
LGDLKW+ E + N G + + ++ E+G+++ G G R+WL+GTAT
Sbjct: 287 YLGDLKWVSEFE------SNYGERRNYCSPVEHIIMELGRMMCGIGDRG-RMWLLGTATF 339
Query: 332 ETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTT 391
+TY+RC+ HPS+E W+L P+ G+ L SN L+ FQ+
Sbjct: 340 QTYMRCKAGHPSLETIWELH--PLTIPVGSLGLGLNLDSN------------LQGRFQSK 385
Query: 392 AAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEK-SSSEVKSEVARPLLPQWL 450
A+ S + ++C C N+++E ++ F S+ + LP WL
Sbjct: 386 ASGDGTSWSLLQSGDKHLTCSTNCSDNFDKESQSIACSFRNGESTTTITTSTSSSLPSWL 445
Query: 451 HNAKAHD-GDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSLGHERIVP 509
K DD+ Q +D W + KK + T + NF S I
Sbjct: 446 QKEKRRKIMDDQECVQV--RDLCNKWNSFCSSVHKKAHST--EKALNFSSPSPSSTSISS 501
Query: 510 VPLSMTGLYNSNLLARQPFQPK-------VQLNRNLGDTLQLNSNMVSSQPAERAVSPLN 562
L ++L +PK ++ N+ + L+ +M AER N
Sbjct: 502 YDQCSPNLQQNHLSWPAIIEPKPPLKEHQFWISENVDEGLEPKFSM---HIAER-----N 553
Query: 563 SPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSF 622
P+ DL+ + SA IE + G K L+ ++
Sbjct: 554 FPI-PDLLSNPNSSPNSASSSEAIEDGEGLYGF-------------------KELNAENL 593
Query: 623 KRLLKSLMEKVWWQQEAASAVATTVTQCK----LGNGKRRGAGSKGDMWLLFMGPDRVGK 678
+ L +L +V WQ++ +A+T+ +C+ G K + K + WLLF+G D GK
Sbjct: 594 RILCNALERRVPWQKDIIPEIASTILECRSGTLRGKNKLKQREDKEETWLLFLGVDFQGK 653
Query: 679 KKMASALSELVSGASPIMIPLG------PRRDHEEPEVRVRGK-----TALDKIGEAVKR 727
K+A +++LV G+ I +G R D E + + + + ++K EAV
Sbjct: 654 DKIAREIAKLVFGSQSKFISIGLSSLGSTRADSTEDFLSKQARDEPVGSYIEKFAEAVHE 713
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
NP V +ED+++ D + +KR +E GR+ + G SL + I I + +
Sbjct: 714 NPHRVFFIEDVEQLDYSSQMGVKRGIESGRIQIAGGEAFSLEDAIIIFSCE 764
>gi|225434576|ref|XP_002279036.1| PREDICTED: uncharacterized protein LOC100241532 [Vitis vinifera]
Length = 1106
Score = 326 bits (835), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 314/1121 (28%), Positives = 509/1121 (45%), Gaps = 201/1121 (17%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +S +Q LT EAA L+ ++ A RR+H QTT LH + LLA PS LR AC ++
Sbjct: 1 MPTPVSIARQCLTDEAARALDDAVGVARRRSHAQTTSLHAISALLAFPSSTLRDACARAR 60
Query: 61 PNSSHP-LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
++ P LQ RALEL V+L+RLP+++ +PP+SN+LMAA+KR+QA QRR PE
Sbjct: 61 SSAYSPRLQFRALELSVGVSLDRLPSSKALE----EPPVSNSLMAAIKRSQASQRRH-PE 115
Query: 120 -----QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK-ATIEQSLNSS--- 170
QQ Q ++VEL+ I+SILDDP VSRV EA F S +K A I+ L+
Sbjct: 116 NFHLQQQNQTASFLRVELKHFILSILDDPIVSRVFGEAGFRSCDIKIAMIQPPLSPVSRF 175
Query: 171 ----------CSVSNSSPIGLGFRPS---------------------SRNLYMNPRLQQA 199
C++++S P F +R NP L
Sbjct: 176 PRTRCPPIFLCNLTDSDPARRTFSFPFAGVSGSGDGDENSRRIGEVLTRKTGKNPLLI-- 233
Query: 200 GGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFTC--------DKAGIVSK 251
GVC S+ + + + + L + + +I ++K+ + DK G+ K
Sbjct: 234 -GVC--SSDALRCFADCVERRKGDVLPAEIAGLNLICIEKEISEFVGRGGSEDKLGL--K 288
Query: 252 LKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGK 311
LK+LG + E +G G+ ++ G+LK LV + + VV+++
Sbjct: 289 LKELGHMAEQY--SGPGIAVNFGELKALVGDDAPG-------------EAASFVVSKLTS 333
Query: 312 LVARFGGGGGRLWLIGTA-TCETYLRCQVYHPSMENDWDLQAVPI-AAKTPLSGMFPRLG 369
L+ LWL+G++ + ETYL+ PS+E DWDL +PI ++++ + G R
Sbjct: 334 LLK----AHPNLWLMGSSGSYETYLKFLTQFPSIEEDWDLHLLPITSSRSSVEGFCSR-- 387
Query: 370 SNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARR-MSCCRQCLQNYEQELAKLSK 428
SS + S P F T P L+ + ++ C C + EQE++ + K
Sbjct: 388 -----SSLMGSFVPFAGFFST-----PTDFKNPLNSTNQSITLCHLCNEKCEQEVSAILK 437
Query: 429 EFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWND 488
S+ ++ LP WL A +K A+ + KD K +QKKW D
Sbjct: 438 ---GGSTISLADRYSGTLPSWL--LMAEPDTNKGADAVKAKDDGRALNDKVLGVQKKWYD 492
Query: 489 TCLN-QHPNFHPSSL--------GHERIVPVP-------------------LSMTGLYNS 520
C H +P S+ G E +P LS + N
Sbjct: 493 ICQRLHHAPPYPKSIFQPVPQVSGAECYGFIPDRRETSSKDSSPSESGSANLSPSTTMNL 552
Query: 521 NLLARQPFQ---PKVQLNRNLGDTLQLNSNMVSSQPAERAVSPLNSP------------- 564
++ Q P V + ++ +L ++ S+ E SP SP
Sbjct: 553 QKISPSKIQIPLPVVSESESVNFQSKLAGSVSKSKQVETRSSPWFSPCPLPNLSLAPDRT 612
Query: 565 -------VRTDLVLGRSKVLESAPEKT-----HIEPVKDFLGCISSE----PPQNKLHES 608
V TDL LG S K H E + F G +S+E N
Sbjct: 613 SSSCITSVTTDLGLGTLYASNSQETKRLNLQGHKERMNYFSGSVSAEFDVVSVNNSSQIG 672
Query: 609 QNDQLQKP-----LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSK 663
Q+ P +D FK L ++L KV WQ EA A++ TV+ C+ GN +R G+ K
Sbjct: 673 QSPSCSVPDLGGQMDARDFKSLWRALASKVGWQDEAICAISQTVSSCRTGNARRHGSNLK 732
Query: 664 GDMWLLFMGPDRVGKKKMASALSELV--SGASPIMIPLGPRRDHEEPE------------ 709
GD+WL F+GPD+VGKK++A+AL+E++ S S + + LG + +
Sbjct: 733 GDIWLSFLGPDKVGKKRIAAALAEIMFRSSKSLVSVDLGYQHGSNQSNSIFDQHELNSCG 792
Query: 710 VRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLG 769
+ RGKT D I +++ P V+ LE+ID+AD++V+ ++ +A+ G+ DS+GREIS+
Sbjct: 793 IEFRGKTITDYIAGELRKKPQLVVFLENIDKADLLVQTSLSQAIRTGKFPDSHGREISIN 852
Query: 770 NVIFILTADWLPDSLKFLS--QGITLDEKKLTSLASGEWQLRLSIRGKTTK-RRASWLD- 825
++IF+ TA + +S + + E+++ L + WQ+++ I T + R++ ++
Sbjct: 853 HMIFVTTATSKKGNRNLVSGKEPVEFSEERI--LGAKSWQMKILIGCVTGEASRSNGMNV 910
Query: 826 --------EEERSTKPRKETGSGLSFDLNKAADVGDDKDGSHNSS---DLTVDHEEEHGF 874
+ST RK +G + +K ++ + NS +L V+ EE
Sbjct: 911 LVTPREGTSNPKSTSKRKFIDTGSFAEQDKYLEMSKRACKASNSYLDLNLPVEELEEDVD 970
Query: 875 TNRLLMTPSTSTPS---QDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSI 931
+ + + ++ L+ +D + FKP +F + + + I+ F IIG + +
Sbjct: 971 SANCDSDSLSESSEAWLEEFLDQMDEKVTFKPFNFDAVAQKLLKEISLNFQKIIGSDIQL 1030
Query: 932 EILDEALEKLVGGVWLGRTG--LEDWTEKVLVPSLHQLKLR 970
EI E + +++ WL G ++DW E+VL S + + R
Sbjct: 1031 EIDSEVMVQILAAAWLSEKGGAVDDWVEQVLSKSFTEARQR 1071
>gi|449499195|ref|XP_004160747.1| PREDICTED: uncharacterized LOC101216395 [Cucumis sativus]
Length = 1109
Score = 325 bits (833), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 322/1127 (28%), Positives = 490/1127 (43%), Gaps = 221/1127 (19%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +S +Q L P+AA L+ ++A A RR H QTT LH + LL+ PS LR AC ++
Sbjct: 1 MPTAVSLARQCLAPDAAHALDEAVAVAHRRGHAQTTSLHAISALLSLPSSALRDACARAR 60
Query: 61 PNSSHP--LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCP 118
+++ LQ +ALELC SV+L+R+P+ Q + DPP+SN+LMAA+KR+QA+QRR P
Sbjct: 61 KTTAYSPRLQFKALELCLSVSLDRVPSTQISD----DPPVSNSLMAAIKRSQANQRRQ-P 115
Query: 119 EQ--------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ---SL 167
E Q + VKVEL+ ++SILDDP VSRV EA F S +K I + L
Sbjct: 116 ENFHLYHQLSHQSSIACVKVELQHFLLSILDDPVVSRVFGEAGFRSSEIKLAIIRPFPQL 175
Query: 168 NSSCSVSNSSPIGL-------------------GFRPSSRNLYMNPRLQQAGGVCGGQSE 208
S S P+ L GFR N N R+ + G G++
Sbjct: 176 LRYTSRSRGPPLFLCNLMDCSDPNRRGFLFPLSGFRDGDNN-DNNRRIGEVLGRNRGRN- 233
Query: 209 PEMV----------VRESLAKIESKELDGVLKNVQIIRLDKDFTCDKAGIVSKLKDLGAL 258
P +V ++ K L L V+ I L+ DF+ +S+ ++G+L
Sbjct: 234 PLLVGVSAYVALKGFTNAIEKRNDNFLPEELAGVRTICLENDFS----RYLSENSEMGSL 289
Query: 259 IETKF---------GNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEI 309
KF G+I++ GDLK V + T + VV ++
Sbjct: 290 -NMKFVEVVQMVEQSPKPGLIVNFGDLKAFVGENST-------------DDRASHVVGQL 335
Query: 310 GKLVARFGGGGGRLWLIGTATC-ETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRL 368
KLV G ++WLIG A+ ETYL PS+E DWDL +PI + P S +PR
Sbjct: 336 KKLV---DVHGDKVWLIGAASSYETYLSFVTKFPSIEKDWDLHLLPITSLRPES--YPR- 389
Query: 369 GSNGILSSSVESLSPLKSAFQTTA-AALPRRVSENLDPARRMSCCRQCLQNYEQELAKLS 427
SS + S PL F T + A +P VS P+R C QC ++ E+E+ S
Sbjct: 390 ------SSLMGSFVPLGGFFSTPSDATIPLNVSYQ-HPSR----CLQCDKSCEEEVIAAS 438
Query: 428 KEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWN 487
K + SE + LP W+ + + D A + +D L+ K QKKW+
Sbjct: 439 KGV---FTPPLSEQYQSSLPSWMQMTELSNFD---AFDAKTRDDGLVLSAKIAGFQKKWD 492
Query: 488 DTCLNQHPN--------------FH--------------------------PSSLGHERI 507
+ C H FH P+ L
Sbjct: 493 NICQRLHHGPPLKEAPMFPTVVGFHATEDKREDAAVINSSTSACASSHKDSPTDLNSRNF 552
Query: 508 VPVPLSMTGLYNSNLL------ARQPFQPKVQLNRNLGDTLQLNS-------NMVSSQPA 554
+ +P L SN + + F K+Q + L+L S ++ S
Sbjct: 553 MDLP--KVSLLRSNTFPLSGKASNENFLSKLQEGTPKIENLELRSRNSPFSLSISSVDDE 610
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVK-----DFLGCISSE---------- 599
R SP V TDL LG + S K + P D GC S+
Sbjct: 611 NRTSSPSAGSVTTDLGLGIVSLPTSYKLKKPLNPKSADFPSDLSGCCSTNVDLVNGRVCN 670
Query: 600 ---PPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK 656
P + + +D S RLLK E+V+WQ +A S ++ T++Q +
Sbjct: 671 GFTPSSSCSSSPEQRGQVNAMDVKSLFRLLK---ERVFWQDQAVSIISQTISQ-----RQ 722
Query: 657 RRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMI------------PLGPRRD 704
R G+ +GD+W F+GPD+ GKK++ A++E++ G I P PR
Sbjct: 723 RHGSNLRGDIWFNFVGPDKFGKKRVGIAVAEIMYGNKDQFICVDLSSQDGMVNPNTPRVR 782
Query: 705 HEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGR 764
E R GKT LD + +++ P S+++LE++D+A+++ + + +A++ G+L D GR
Sbjct: 783 SYSAEFR--GKTVLDFVAAELRKQPLSIVMLENVDKAELLDQNRLSQAIQTGKLSDLQGR 840
Query: 765 EISLGNVIFILTADWLPDSLKFL---SQGITLDEKKLTSLASGEWQLRLSIR---GKTTK 818
E+S+ N IF+ T L + Q + EK+L L + W LR+ + G T
Sbjct: 841 EVSIKNAIFMTTTTSLITEHQITFPNKQMLKYSEKRL--LKAKSWPLRIQVASSFGDQTN 898
Query: 819 RRASWLDEEERST---------KPRKETGSGLSFDLNKAADVGDDKDGSHNSSDLTVDHE 869
R + D E +ST K GS ++++ + S+ DL E
Sbjct: 899 RSKTVSDTERKSTPNPFFMSKRKLNVIDGSSDHHEISEMVKRSNKTPTSNKFPDLNRPAE 958
Query: 870 E--EHGFTNRLLMTPSTSTPS----QDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSS 923
E +H STS S Q+ N +D +VFKP DF + + + K F S
Sbjct: 959 ENPQHDIDGDWTDNDSTSEISKTWLQEFCNHIDQVVVFKPFDFDGLAEKIQKDVKKIFHS 1018
Query: 924 IIGDALSIEILDEALEKLVGGVWL--GRTGLEDWTEKVLVPSLHQLK 968
+ G +EI +E+L+ ++ G ++DW E+VL ++K
Sbjct: 1019 VFGPEYMLEIDSMVMEQLLAAAYISYGNKDVDDWMEQVLSRKFLEVK 1065
>gi|297849012|ref|XP_002892387.1| hypothetical protein ARALYDRAFT_311783 [Arabidopsis lyrata subsp.
lyrata]
gi|297338229|gb|EFH68646.1| hypothetical protein ARALYDRAFT_311783 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 321 bits (822), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 303/1053 (28%), Positives = 488/1053 (46%), Gaps = 174/1053 (16%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACI--- 57
M ++T ++ LT EAA L+ ++A A RR+H QTT LH + LLA PS LR+ C+
Sbjct: 1 MPTPVTTARECLTEEAARALDDAVAVARRRSHAQTTSLHAVSALLAMPSSILREVCVSRA 60
Query: 58 -KSHPNSSHPLQCRALELCFSVALERLPTAQQNVSPGL--DPPISNALMAALKRAQAHQR 114
+S P SS LQ RALELC V+L+RLP+++ SP DPP+SN+LMAA+KR+QA+QR
Sbjct: 61 ARSTPYSSR-LQFRALELCVGVSLDRLPSSK---SPATEEDPPVSNSLMAAIKRSQANQR 116
Query: 115 RGCPEQQQQPLLA------------VKVELEQLIISILDDPSVSRVMREASFSSPAVKAT 162
R Q + A +KVEL+ I+SILDDP V+RV EA F S +K
Sbjct: 117 RHPETYHLQQIHASNNGGGGCQTTVLKVELKYFILSILDDPIVNRVFGEAGFRSSDIKLD 176
Query: 163 IEQ---SLNSS------------CSVSNSSPI-------GLGFRPSSRNL--------YM 192
+ + SS C++ NS P GF +SR +
Sbjct: 177 VLHPPVTQFSSRFSRGRCPPLFLCNLPNSDPNREFPFCGSSGFDENSRRIGEVLGRKDKK 236
Query: 193 NPRLQQAGGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDK-------DFTCDK 245
NP L G C ++ + K+ +D + + +I ++K D + ++
Sbjct: 237 NPLLV---GNCANEALKTFTDSINTGKLGFLPMD--ISGLSLISIEKEISEILADGSKNE 291
Query: 246 AGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEV 305
I K+ DLG ++E G+ G++L+LG+LK L + L +
Sbjct: 292 EEIRVKVDDLGRIVEQN-GSKSGIMLNLGELKVLT---------------SEANAALENL 335
Query: 306 VAEIGKLVARFGGGGGRLWLIGTATC-ETYLRCQVYHPSMENDWDLQAVPIAAKTPLS-- 362
V+++ L+ +LW IG + ETY + P++E DWDL +PI A T S
Sbjct: 336 VSKLSDLLKH---QSKKLWFIGCVSSNETYTKLIDRFPTIEKDWDLHVLPITASTKPSSQ 392
Query: 363 GMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQE 422
G++P+ SS + S P F +T+ RV + + +S C C + Y QE
Sbjct: 393 GVYPK-------SSLMGSFVPFGGFFSSTSDF---RVPLSSTVNQTLSRCHLCNEKYLQE 442
Query: 423 LAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQEL 482
+A + K SSS ++ LP WL + + D T ++ D ++ L
Sbjct: 443 VAAVLK---ASSSLSLADQCSEKLPPWLRAVETKE-DKGTTGSSKALDDANTSASQTAAL 498
Query: 483 QKKWNDTCLNQHPNFHPSSLGHERI---VPVPLSMTGLYNSNLL-ARQPFQPKVQLNRNL 538
QKKW++ C + H LG + + PV + ++ L + P + + +
Sbjct: 499 QKKWDNICQSIHHTPAIPKLGFQSVSSQFPVQTEKSVRTPTSFLETSKLLNPPISKPKPM 558
Query: 539 GDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISS 598
D +++ R VS S V TD LG ++ KT E
Sbjct: 559 ED--------LTTSVTNRTVSSPLSCVTTDFGLGVIYASKNQESKTARE----------- 599
Query: 599 EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR 658
+P L+ S QK FK L + L KV WQ EA +A++ + CK + +R
Sbjct: 600 KPLLVTLNSSLEHTYQK-----DFKSLRELLSRKVAWQTEAVNAISQIICGCKTDSTRRN 654
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTAL 718
A +WL +GPD+VGKKK+A ALSE+ G I + +H + + RGKT +
Sbjct: 655 QASG---IWLALLGPDKVGKKKVAMALSEVFFGGQVNCICVDFGAEHCFLDDKFRGKTVV 711
Query: 719 DKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
D I + R P SV+LLE++++AD + + A+ G++ DS+GR IS+ NVI + T+
Sbjct: 712 DYITAELSRKPHSVVLLENVEKADFPDQMRLSEAVSTGKIRDSHGRVISMKNVIVVATSG 771
Query: 779 WLPD-SLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTK----RRASWLDEEERSTKP 833
D + +++ + E ++ L++ W+L++ + G +TK +R L+ E+R+ K
Sbjct: 772 IAKDNATDHVTKPVKFPEDQV--LSARSWKLQIKL-GDSTKIGVNKRKHELETEQRAVKV 828
Query: 834 RKETGSGLSFDLNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLN 893
++ DLN N +++++DHE E ++T D +
Sbjct: 829 QRSY-----LDLNLPV----------NETEVSLDHETE-----------DSNTWFDDFIE 862
Query: 894 SVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWL------ 947
VD + FKPVDF + +++ I+ F G +E+ E + +++ W
Sbjct: 863 QVDGKVTFKPVDFDGLAKNIQEKISSHFERCFGSETHLELDQEVIIQILAASWSSLSSDE 922
Query: 948 --GRTGLEDWTEKVLVPSLHQLKLRLPNNATAA 978
G+T ++ W + VL PS + K + +N A
Sbjct: 923 EEGKT-VDQWMQTVLAPSFAEAKQKYGSNPMLA 954
>gi|357449635|ref|XP_003595094.1| hypothetical protein MTR_2g038200 [Medicago truncatula]
gi|124359320|gb|ABD28470.2| ATP binding , related [Medicago truncatula]
gi|355484142|gb|AES65345.1| hypothetical protein MTR_2g038200 [Medicago truncatula]
Length = 1020
Score = 319 bits (817), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 335/1092 (30%), Positives = 483/1092 (44%), Gaps = 240/1092 (21%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MR+G T+Q+TLT EAAS+L HS+ A RR H Q TPLHVAATLL+ PS LR AC+KS
Sbjct: 1 MRSGAYTLQETLTAEAASILKHSLGLARRRGHAQITPLHVAATLLSLPSSSLRNACLKSQ 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQN--VSPGLDPPISNALMAALKRAQAHQRRGCP 118
++HPLQCRALELCF+VAL RLPT + + P P +SNAL+AALKRAQAHQRRGC
Sbjct: 61 QQNNHPLQCRALELCFNVALNRLPTTTTSPLLQPQHVPSLSNALIAALKRAQAHQRRGCI 120
Query: 119 E----QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVS 174
E QQQQPLL+VKVEL+QLI+SILDDPSVSRVMREA FSSP+VK +E NSS ++
Sbjct: 121 EQNQQQQQQPLLSVKVELDQLILSILDDPSVSRVMREAGFSSPSVKNNLE---NSSTLIN 177
Query: 175 NSSPIGLGFRPSSRNLYMNPRLQQAGGVCGGQSEPEMVVRESLAK-IESKELDGVLKNVQ 233
+SS P S N +++ G V + E VV K ES + D L
Sbjct: 178 SSSVFHSSPSPLSHNHFLSSY--GYGSVLFSSQKKEQVVYHPFLKSSESNKEDINLVFDV 235
Query: 234 IIRLDKDFTCDKAGIVSKLKDLGALIETKFGNGD-------------------------- 267
++R K T VS + L + I +F G+
Sbjct: 236 LLRKKKKNTVIVGDTVSLTEGLVSEIMKRFERGEVPDEMKTTHFVKFHGLSSVSLKYMKK 295
Query: 268 -----------------------GVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAE 304
G I +GDLKW+V+ N G+L +++V+
Sbjct: 296 EEVEMNVIRVLKRKVSDYVALGVGAIFYVGDLKWIVDD--------NDGSL-NEKEVVDY 346
Query: 305 VVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGM 364
VV EIGKL G G++WL+ TA+ ++Y+RCQ+ P+ EN W LQAVP+ P G+
Sbjct: 347 VVEEIGKLFGEEGNKNGKIWLVATASYQSYMRCQMRVPTFENQWCLQAVPV----PSGGL 402
Query: 365 FPRLGSNGILSSS----VESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYE 420
L S+ V S Q + L + N + +++CC +C+ NYE
Sbjct: 403 GLSLHSSRRHCEKHCWLVSVHDSKMSISQNPSPMLESKFFSNKEEHEKLNCCEECVSNYE 462
Query: 421 QELAKLSKEFEKSSSEVKSEVARPLLPQWL--HNAKAHDGDDKTAEQTENKDQDLIWKQK 478
+E A+L K +K+ LLP WL H+ +A D+ T
Sbjct: 463 KE-AQLFKPDQKN-----------LLPSWLQSHSTEARQKDELT---------------- 494
Query: 479 SQELQKKWNDTCLNQHPNFHPSSL------GHERIVP---------------VPLSMTGL 517
+L KKWN C H N P + + +I P +P + + +
Sbjct: 495 --QLNKKWNRLCQCLHQNKQPQNHWSNNHSSNAKIYPYNSSYPYWPNQGSSILPDTSSSI 552
Query: 518 ----------YNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRT 567
Y+SNL+ R F+ Q T++ N N +Q + V
Sbjct: 553 SFADSATKPAYSSNLIPR--FRRGQQ-----SCTIEFNFNDEKAQKNQ---------VTA 596
Query: 568 DLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLK 627
L L K +E E VK L +S + +N LQ+ + K
Sbjct: 597 TLELDSLKGMEGTKE------VKTTLALGNSTFSVSDQKRMENLTLQR-------DHIYK 643
Query: 628 SLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E + W E S++A + K + + WL G D VGKK++A A++E
Sbjct: 644 VLQENIPWHCETVSSIAEALVDSK--------SSKECATWLFLQGNDSVGKKRLALAIAE 695
Query: 688 LVSGASPIM--IPLGPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVV 745
V G+ + + + R + E P +K+ +K N V+L+E+ D D ++
Sbjct: 696 SVFGSVEMFSHVDMMKRENSETP--------FSEKVVGPLKNNEKFVVLVENADFGDTLI 747
Query: 746 RGNIKRAMERGRLVDSYGREISLGNVIFIL-------TADWLPDSLKFLSQGITLDEKKL 798
R + E + +G +LG IFIL + D DS+ L I+ EKK
Sbjct: 748 RKMLADEFE----IAKFG---TLGQKIFILSNGGSMVSEDQKKDSVMKLVLKISETEKKP 800
Query: 799 TSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSG-----LSF---------- 843
T S KR A LD + PR E G SF
Sbjct: 801 TFELSPSSSSSSKSPCLGNKRSAE-LDLFSKIKIPRIEENEGNKKREFSFSRQSSFNNTL 859
Query: 844 DLNKAA-----DVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSA 898
DLN A + D+ + S SSDLT + EH +N + L+S+++
Sbjct: 860 DLNMKADEEDNEDYDEGENSPISSDLTRETLGEHLISN-------------ESLDSIENL 906
Query: 899 IVFK--PVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKL-VGGVWLGRTGLEDW 955
F P + + + + + F ++G+ + + D+ +E++ VG E W
Sbjct: 907 FEFNQSPAKNKEMTQMFMSRVKESFEEVLGN-VKFSVQDKVIEEIGVGCGSFTNNMFEKW 965
Query: 956 TEKVLVPSLHQL 967
+ + SL ++
Sbjct: 966 LKGIFQTSLERV 977
>gi|449455148|ref|XP_004145315.1| PREDICTED: uncharacterized protein LOC101203741 [Cucumis sativus]
Length = 1090
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 313/1110 (28%), Positives = 508/1110 (45%), Gaps = 215/1110 (19%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +S +Q LT EAA L+ +++ A RR H QTT LH + LL+ PS LR AC ++
Sbjct: 1 MPTPVSAARQCLTEEAARALDDAVSVARRRCHAQTTSLHAVSALLSLPSSALRDACSRAR 60
Query: 61 PNSSHP-LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
+ P LQ RAL+L V+L+RLP+++ P +PP+SN+LMAA+KR+QA+QRR PE
Sbjct: 61 SCAYLPRLQFRALDLSVGVSLDRLPSSK----PTDEPPVSNSLMAAIKRSQANQRRH-PE 115
Query: 120 ---------QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK-ATIEQSLNS 169
QQQ P + +KVEL+ I+SILDDP VSRV EA F S +K A + L
Sbjct: 116 SFHLHQIHNQQQTPSI-LKVELKYFILSILDDPIVSRVFGEAGFRSCDIKLAIMHPPLTH 174
Query: 170 SCS----VSNSSPIGLGFRPSSRNLYMNPRLQQAGGVCGGQSEP------EMVVRES--- 216
S + PI L S + N +GG G + E++VR++
Sbjct: 175 HASRFPRSARCPPIFLCNLTDSDLGHRNFPFPFSGGYGNGDDDANTRRIGEILVRKTGRN 234
Query: 217 ------------------LAKIESKELDGVLKNVQIIRLDKDFTCDKAGIVSKLKDLGAL 258
L + +++ L + +++I ++K+ + +G SK
Sbjct: 235 PLLIGVYAADALRSFTDCLQRCKTESLPAEISGLRVICIEKEISEFVSGNGSK-----ET 289
Query: 259 IETKFGNGDGVILDLGDLKWLVEQQVTSFG-VPNSGTLQQQQQVLAEVVAEIGKLVARFG 317
+ +KF G+I QQ + G V N G L++ ++ VV+++ L+ +
Sbjct: 290 MRSKFEEIFGMI-----------QQCSGPGIVVNYGELKEVHNGMSFVVSQLTDLLKLYN 338
Query: 318 GGGGRLWLIG-TATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSS 376
G ++WLIG T + + + ++E DWDL +PI +K P+ +F G SS
Sbjct: 339 G---KVWLIGAVGTYKMHEKFLAKFSAIEKDWDLHLLPITSK-PMVDVF------GAKSS 388
Query: 377 SVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSE 436
+ S P F + + P ++S P + + C QC +EQE+A + K +
Sbjct: 389 FMGSFVPF-GGFFPSQSNFPSQLSS---PNQSFTRCHQCTDKFEQEVAAIWKPGSSTVLG 444
Query: 437 VKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPN 496
SE + + P + D K + + +D K LQKKWND C
Sbjct: 445 HHSESSLHMSPTEI------DAKCKEFDMYKTRDDRSAMSDKVIGLQKKWNDICRLHQRQ 498
Query: 497 FHPS-----------------SLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLG 539
P +L HER P S+TG + ++ +Q N N
Sbjct: 499 LFPKLDISHTMHGVSFESPRFALDHERSGEEPSSVTG--DRFVIGHPCLSRDLQNNLNTK 556
Query: 540 DTLQLN-----------SNMVS-SQPAE----RAVS-------------PLNSP---VRT 567
T Q++ SN+VS + P E R S PL S V T
Sbjct: 557 QTRQISEISDSHTDNFQSNIVSGASPGEAESLRIFSKPVVPKGHLHSDKPLPSSFISVTT 616
Query: 568 DLVLG---------RSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQ---NDQLQK 615
DL LG + K+++ +K I+ + S P N +S + +
Sbjct: 617 DLGLGTLYASAGENKRKIVDLESQKVSIQHLTGSNKTEYSRPSNNNPGQSSGFSDLSAGQ 676
Query: 616 PLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDR 675
LD FK L +L EKV WQ +A S++ T+ +C+ G GKRR + S+GD+WL F+GPD
Sbjct: 677 VLDIREFKSLWNALNEKVSWQGKATSSIVETILRCRTGGGKRRSSNSRGDIWLTFLGPDM 736
Query: 676 VGKKKMASALSELVSGA--SPIMIPLGPR-RDHEEPEV-----------RVRGKTALDKI 721
+GK+K++ AL+EL+ G+ + I + G + RD + R RG+T +D +
Sbjct: 737 MGKRKISFALAELMFGSRENLISVDFGSQDRDRRHNSLFDCQGLNGYDERFRGQTVVDYV 796
Query: 722 GEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLP 781
+++ P SV+LLE++D+AD+ + + +A+ G+ +DS+GR+ ++ N IF+ T LP
Sbjct: 797 AGELRKKPSSVVLLENVDKADVRAKSCLSQAIATGKFLDSHGRQFTINNTIFLTT---LP 853
Query: 782 DSLKFLSQGITLDEKKLTS---LASGEWQLRLSIRGKTT--------------------- 817
+ +K S + ++ + + LA+ Q++++++G T+
Sbjct: 854 NKVKKTSNLDSEEQTEFSEDRILAARNCQMQITVQGFTSDVSKCKNTNVRITSAPRGSSN 913
Query: 818 ----KRRASWLDEEERSTKPRKETGSGLSF-DLNKAADVGDDKDGSHNSSDLTVDHEEEH 872
K+R LD E T+ +K + S +SF DLN + +D+ N D D E
Sbjct: 914 LSIFKKRK--LDNE--FTELKKASSSSMSFLDLNLPLEEVEDES---NEGDCDSDSASE- 965
Query: 873 GFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIE 932
+ + L VD I+FKP +F + I +F + G + +E
Sbjct: 966 ----------GSEAWVDEFLEQVDEKIMFKPYNFDEAAEKLVKEINLQFRRVFGSEVVLE 1015
Query: 933 ILDEALEKLVGGVWLG--RTGLEDWTEKVL 960
I + + +++ WL + +E+W E VL
Sbjct: 1016 IDYKIIVQILAAKWLSEKKNAMEEWLELVL 1045
>gi|449472677|ref|XP_004153665.1| PREDICTED: uncharacterized protein LOC101204506 [Cucumis sativus]
Length = 1094
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 312/1119 (27%), Positives = 512/1119 (45%), Gaps = 221/1119 (19%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +S +Q LT EAA L+ +++ A RR H QTT LH + LL+ PS LR AC ++
Sbjct: 1 MPTPVSAARQCLTEEAARALDDAVSVARRRCHAQTTSLHAVSALLSLPSSALRDACSRAR 60
Query: 61 PNSSHP-LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
+ P LQ RAL+L V+L+RLP+++ P +PP+SN+LMAA+KR+QA+QRR PE
Sbjct: 61 SCAYLPRLQFRALDLSVGVSLDRLPSSK----PTDEPPVSNSLMAAIKRSQANQRRH-PE 115
Query: 120 ---------QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK-ATIEQSLNS 169
QQQ P + +KVEL+ I+SILDDP VSRV EA F S +K A + L
Sbjct: 116 SFHLHQIHNQQQTPSI-LKVELKYFILSILDDPIVSRVFGEAGFRSCDIKLAIMHPPLTH 174
Query: 170 SCS----VSNSSPIGLGFRPSSRNLYMNPRLQQAGGVCGGQSEP------EMVVRES--- 216
S + PI L S + N +GG G + E++VR++
Sbjct: 175 HASRFPRSARCPPIFLCNLTDSDLGHRNFPFPFSGGYGNGDDDANTRRIGEILVRKTGRN 234
Query: 217 ------------------LAKIESKELDGVLKNVQIIRLDKDFT------CDKAGIVSKL 252
L + +++ L + +++I ++K+ + K + SK
Sbjct: 235 PLLIGVYAADALRSFTDCLQRCKTESLPAEISGLRVICIEKEISEFVSGNGSKETMRSKF 294
Query: 253 KDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKL 312
+++ +I+ +G G++++ G+LK E+ V N ++ VV+++ L
Sbjct: 295 EEIFGMIQQ--CSGPGIVVNYGELKEDEEE------VHNG---------MSFVVSQLTDL 337
Query: 313 VARFGGGGGRLWLIG-TATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSN 371
+ + G ++WLIG T + + + ++E DWDL +PI +K P+ +F
Sbjct: 338 LKLYNG---KVWLIGAVGTYKMHEKFLAKFSAIEKDWDLHLLPITSK-PMVDVF------ 387
Query: 372 GILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFE 431
G SS + S P F + + P ++S P + + C QC +EQE+A + K
Sbjct: 388 GAKSSFMGSFVPF-GGFFPSQSNFPSQLSS---PNQSFTRCHQCTDKFEQEVAAIWKPGS 443
Query: 432 KSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCL 491
+ SE + + P + D K + + +D K LQKKWND C
Sbjct: 444 STVLGHHSESSLHMSPTEI------DAKCKEFDMYKTRDDRSAMSDKVIGLQKKWNDICR 497
Query: 492 NQHPNFHPS-----------------SLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQL 534
P +L HER P S+TG + ++ +Q
Sbjct: 498 LHQRQLFPKLDISHTMHGVSFESPRFALDHERSGEEPSSVTG--DRFVIGHPCLSRDLQN 555
Query: 535 NRNLGDTLQLN-----------SNMVS-SQPAE----RAVS-------------PLNSP- 564
N N T Q++ SN+VS + P E R S PL S
Sbjct: 556 NLNTKQTRQISEISDSHTDNFQSNIVSGASPGEAESLRIFSKPVVPKGHLHSDKPLPSSF 615
Query: 565 --VRTDLVLG---------RSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQ---N 610
V TDL LG + K+++ +K I+ + S P N +S +
Sbjct: 616 ISVTTDLGLGTLYASAGENKRKIVDLESQKVSIQHLTGSNKTEYSRPSNNNPGQSSGFSD 675
Query: 611 DQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLF 670
+ LD FK L +L EKV WQ +A S++ T+ +C+ G GKRR + S+GD+WL F
Sbjct: 676 LSAGQVLDIREFKSLWNALNEKVSWQGKATSSIVETILRCRTGGGKRRSSNSRGDIWLTF 735
Query: 671 MGPDRVGKKKMASALSELVSGASP--IMIPLGPR-RDHEEPEV-----------RVRGKT 716
+GPD +GK+K++ AL+EL+ G+ I + G + RD + R RG+T
Sbjct: 736 LGPDMMGKRKISFALAELMFGSRENLISVDFGSQDRDRRHNSLFDCQGLNGYDERFRGQT 795
Query: 717 ALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT 776
+D + +++ P SV+LLE++D+AD+ + + +A+ G+ +DS+GR+ ++ N IF+ T
Sbjct: 796 VVDYVAGELRKKPSSVVLLENVDKADVRAKSCLSQAIATGKFLDSHGRQFTINNTIFLTT 855
Query: 777 ADWLPDSLKFLSQGITLDEKKLTS---LASGEWQLRLSIRGKTT---------------- 817
LP+ +K S + ++ + + LA+ Q++++++G T+
Sbjct: 856 ---LPNKVKKTSNLDSEEQTEFSEDRILAARNCQMQITVQGFTSDVSKCKNTNVRITSAP 912
Query: 818 ---------KRRASWLDEEERSTKPRKETGSGLSF-DLNKAADVGDDKDGSHNSSDLTVD 867
K+R LD E T+ +K + S +SF DLN + +D+ N D D
Sbjct: 913 RGSSNLSIFKKRK--LDNE--FTELKKASSSSMSFLDLNLPLEEVEDES---NEGDCDSD 965
Query: 868 HEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGD 927
E + + L VD I+FKP +F + I +F + G
Sbjct: 966 SASE-----------GSEAWVDEFLEQVDEKIMFKPYNFDEAAEKLVKEINLQFRRVFGS 1014
Query: 928 ALSIEILDEALEKLVGGVWLG--RTGLEDWTEKVLVPSL 964
+ +EI + + +++ WL + +E+W E VL S
Sbjct: 1015 EVVLEIDYKIIVQILAAKWLSEKKNAMEEWLELVLHRSF 1053
>gi|356574695|ref|XP_003555481.1| PREDICTED: uncharacterized protein LOC100800986 [Glycine max]
Length = 831
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 260/853 (30%), Positives = 397/853 (46%), Gaps = 151/853 (17%)
Query: 1 MRAGLSTIQ-QTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKS 59
MR G+ +IQ Q LTPEAA+V+ ++ A+RR H Q TPLHVA+ +LA+ +G LR+AC++
Sbjct: 1 MRGGICSIQLQALTPEAATVVKQAVNLATRRGHAQVTPLHVASAMLATSTGLLRKACLQC 60
Query: 60 HPNSSHPLQCRALELCFSVALERLPTAQQN--VSPGLDPP-ISNALMAALKRAQAHQRRG 116
H SHPLQC+ALELCF+VAL RLP + + ++P P +SNAL+AA KRAQAHQRRG
Sbjct: 61 H---SHPLQCKALELCFNVALNRLPASTSSPLLAPQYSTPSLSNALVAAFKRAQAHQRRG 117
Query: 117 CPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSS-CSVSN 175
E QQQ +LA+K+E+EQL+ISILDDPSVSRVMREA FSS VK +EQ+++ CS
Sbjct: 118 SIENQQQHILALKIEVEQLVISILDDPSVSRVMREAGFSSTLVKTRVEQAVSMEVCSQKA 177
Query: 176 SSPIGLGFRPSSRNL----------YMNPRLQQAGGVCGGQS--EPEMVVRESLAKIESK 223
+ + NL ++ ++ V G+S E VVR + + E
Sbjct: 178 QAKENITKPHHQPNLDHVNNDDVTSVLSELAKRRNTVIVGESVTNAEGVVRGVIERFEVG 237
Query: 224 ELDGVLKNVQIIRLDKDFTC----DKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWL 279
+ G L+ VQ + L C K + KL ++ L+++ G GV+L LGDLKWL
Sbjct: 238 NVPGDLRYVQFVSL--PLMCFRNISKEEVEQKLMEVRNLVKSYVGG--GVVLYLGDLKWL 293
Query: 280 VE------QQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCET 333
E +Q T++ + +V E+ KLV G RLWL+G +T +T
Sbjct: 294 FEFWANFREQKTNYC------------SVEHMVMELKKLVCG-SGESSRLWLMGISTFKT 340
Query: 334 YLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAA 393
Y++C++ HPS+E W+L I GILS S+ S ++ +
Sbjct: 341 YMKCKICHPSLETIWELHPFTIPV--------------GILSLSLNLDSDFQAQERNKVF 386
Query: 394 ALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNA 453
+ ++CCR C N+E+E ++ K + S LP WL N
Sbjct: 387 FKDVAFEDRAGVRNHLTCCRDCTINFEKEAQSITSTISKKACTTSS------LPTWLQNC 440
Query: 454 KAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTC--LNQHPNFHPSSL--------- 502
K D E EN + ++L KKWN C +++HP+ + +
Sbjct: 441 KEERSD--IMEDQENA--------RLKDLCKKWNSLCNSIHRHPSINEKQVFFVSSSPSS 490
Query: 503 -----GHERIVPVPLSMTGLYNSNL----LARQPFQPK-VQLNRNLGDTLQLNSNMVSSQ 552
HER + ++S+L ++ PK +L GD +SN +
Sbjct: 491 PTSVSSHER-------KSNFHHSHLNWPIISESEKSPKECELYTETGDD-GYDSNFIMFM 542
Query: 553 PAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQ 612
P P DL+ S S + E V + P + H+ D
Sbjct: 543 PDSDVPKP-------DLL---SNPNSSPNSASSSEAVDGLESTQMFKEPNAENHKILCDA 592
Query: 613 LQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGS-----KGDMW 667
L+K KV +E +A+TV C+ G KR S + W
Sbjct: 593 LEK----------------KVPQHKEVIPEIASTVLHCRSGMRKRDQNHSMKREDNQETW 636
Query: 668 LLFMGPDRVGKKKMASALSELVSGASPIMIPLG------PRRDHEEPEVRVRGK------ 715
+ F+G + K+ ++ L+++V G+ + +G P D + + + + K
Sbjct: 637 MFFLGVNSQAKESISRELAKVVFGSYSNFVTIGMSSFSSPEDDDDSTDEKSKRKRPREEL 696
Query: 716 --TALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIF 773
+ + GEAV NP V LED+D+ D + +++A++ G + G + L + I
Sbjct: 697 KSSYAQRFGEAVNENPHRVFFLEDLDQVDYFSQKGVEQAIQSGSITLPGGESVPLMDAIV 756
Query: 774 ILTADWLPDSLKF 786
I + + S K
Sbjct: 757 IFSCESFFSSPKL 769
>gi|356577524|ref|XP_003556874.1| PREDICTED: uncharacterized protein LOC100775479 [Glycine max]
Length = 828
Score = 315 bits (807), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 255/822 (31%), Positives = 398/822 (48%), Gaps = 101/822 (12%)
Query: 1 MRAGLSTIQ-QTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKS 59
MRAG+ +IQ Q LTPEAA+++ ++ A+RR H Q TPLH+A +LA+ +G LR+ ++
Sbjct: 1 MRAGVCSIQLQALTPEAATLVKQAVTLATRRGHAQVTPLHIATVMLATSTGLLRKVFLQC 60
Query: 60 HPNSSHPLQCRALELCFSVALERLPTAQQNVSP----GLDPPISNALMAALKRAQAHQRR 115
H SHPLQ +ALELCF+V+L RLP + P +SNAL+AA KRAQAHQRR
Sbjct: 61 H---SHPLQYKALELCFNVSLNRLPAPTPSPLLSPPYSTTPSLSNALVAAFKRAQAHQRR 117
Query: 116 GCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSS-CSVS 174
G E QQQP+LA+K+E+EQLI+SILDDPS+SRVMREA FSS VK +EQ+++ CS
Sbjct: 118 GSIENQQQPILALKIEMEQLIVSILDDPSISRVMREAGFSSALVKTRVEQAVSMEVCSQH 177
Query: 175 NSSPIG-------LGFRPSSRNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKIESKELDG 227
+S LG +S + + + V + E V R + ++E+ + G
Sbjct: 178 QASKENTTTKLQVLGDDVTSVLSELVSKRRNTVIVGESLASAEGVARGVMERLETGSVQG 237
Query: 228 VLKNVQIIRLD-KDF-TCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVT 285
L+ VQ + L F K + KL +L L+++ G G+IL LGDLKWL E
Sbjct: 238 ELRFVQFVSLPLVSFRNISKEEVERKLVELRNLVKSHVGR--GLILYLGDLKWLFEFW-- 293
Query: 286 SFGVPNSGTLQQQQQVLAEV---VAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHP 342
S +Q+ V V E+ KL++ RLWL+G AT TY++ + HP
Sbjct: 294 ------SSYCEQRTNYYCSVEHMVMELKKLISG-NRENSRLWLMGIATFRTYIKGKACHP 346
Query: 343 SMENDWDLQ--AVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVS 400
S+E WDL VP+ G LS ++ S ++
Sbjct: 347 SLETIWDLHPFTVPV----------------GSLSLALNFDSDFHVQERSKVTFKDESFE 390
Query: 401 ENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDD 460
E + ++CCR C N+E+E ++ F S + + LP WL N KA
Sbjct: 391 ERAKVRKYLTCCRDCSLNFEKEAKSIASSFTISKRDCTTS-----LPTWLKNCKA----- 440
Query: 461 KTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNS 520
+ + E+++ +W ++ KKWN C + H PS+L P + +
Sbjct: 441 ERSRMMEDQENAKLW-----DICKKWNSFCSSAHG--FPSNLEK----PFLFISSSPSSP 489
Query: 521 NLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQ---PAERAVSPLNSPVRTDLVLGRSKVL 577
++ +P + L+ LN ++S + P E + + VR D G ++
Sbjct: 490 TSVSSHERKPSLNLS-------HLNWPVISERKEVPKECELYT-ETTVRNDSYEG--NLI 539
Query: 578 ESAPEKTHIEPVKDFLGCISSEPPQNKLHES----QNDQLQKPLDPDSFKRLLKSLMEKV 633
PE+ H +P D L +S P E+ + Q+ K + ++ K L +L +K
Sbjct: 540 MFMPERNHPKP--DLLSNPNSSPNSASSSEAVEGLDSTQMFKDHNDENLKILCDALEKKA 597
Query: 634 WWQQEAASAVATTVTQCKLGNGKRRGAGSKGD----MWLLFMGPDRVGKKKMASALSELV 689
Q++ +A+TV C+ G K K D W F+G D K+ ++ L++++
Sbjct: 598 PQQKKTVKEIASTVLLCRSGMRKVGNHLVKRDDRQETWFFFLGVDSQAKEMVSKELAKVI 657
Query: 690 SGASPIMIPLG---PRRDHEEPE-VRVR---GKTALDKIGEAVKRNPFSVILLEDIDEAD 742
G+ + +G HEE + R R G + L + GEA+ NP V +ED+++ D
Sbjct: 658 FGSYSNFVSIGLSCFSLTHEESKNKRARDEFGGSYLQRFGEALNENPHRVFFMEDLEQVD 717
Query: 743 MVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
+ +K+ +E G + G + L + I I +++ L
Sbjct: 718 HFSKKGVKQGIESGAITLPGGESVPLKDAIVIFSSECFSSVL 759
>gi|357442825|ref|XP_003591690.1| Heat shock protein [Medicago truncatula]
gi|355480738|gb|AES61941.1| Heat shock protein [Medicago truncatula]
Length = 849
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 265/848 (31%), Positives = 397/848 (46%), Gaps = 137/848 (16%)
Query: 1 MRAGLSTIQ-QTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKS 59
MR G+ +IQ Q LT EAA+V+ ++ A+RR H Q TPLHVA+ +LA+ +G LR+AC++
Sbjct: 1 MRGGICSIQLQALTQEAATVVKQAVNLATRRGHAQVTPLHVASAMLATSTGILRKACLQC 60
Query: 60 HPNSSHPLQCRALELCFSVALERLPTAQQNVSPGL------DPPISNALMAALKRAQAHQ 113
H SHPLQC+ALELCF+VAL RLP + Q SP L P +SNAL+AA KRAQAHQ
Sbjct: 61 H---SHPLQCKALELCFNVALNRLPASTQ--SPLLGPQYSTTPSLSNALVAAFKRAQAHQ 115
Query: 114 RRGCPE-QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCS 172
RRG E QQQQ +LA+K+E+EQLIISILDDPSVSRVMREA FSS VK+ +E
Sbjct: 116 RRGTIENQQQQHILALKIEVEQLIISILDDPSVSRVMREAGFSSTLVKSRVEVEQALPIE 175
Query: 173 VSNSSPIGLGFRPSSRNLYMNPRLQQAGG----------------------------VCG 204
VS++ + S+ L + P++ GG V
Sbjct: 176 VSSTKVSSEYHKNQSKELSLKPQVLSLGGSYTKPIDCVNNDDVTSVLSELVKRRRNTVIV 235
Query: 205 GQ--SEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFTC----DKAGIVSKLKDLGAL 258
G+ S E V + + + E ++ L+ VQ + L C K + K ++ +L
Sbjct: 236 GESVSNAEGVAKGVMERFEIGDVPMELRYVQFVSL--PLICFRNISKEEVEKKFVEVRSL 293
Query: 259 IETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEV---VAEIGKLVAR 315
+++ G GVIL LGDLKWL E S +Q++ V V EI KLV+
Sbjct: 294 VKSYMGR--GVILYLGDLKWLFEFW--------SSYCEQKRNYYCSVEHMVMEIKKLVSG 343
Query: 316 FGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILS 375
G RLWL+G A +TY++C++ HPS+E W+L I G LS
Sbjct: 344 -SGESSRLWLMGIANFKTYMKCKISHPSLETIWELHPFTIPV--------------GSLS 388
Query: 376 SSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSS 435
S+ S ++ ++ + + ++++CCR C +E E L+ K +
Sbjct: 389 LSLNFDSDFQAKERSMVLFNDLTFEDKVGVGKQLTCCRDCSIKFENEALSLTNNISKKAC 448
Query: 436 EVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHP 495
LP WL N K + T E EN + ++L KKWN C + H
Sbjct: 449 SSS-------LPTWLQNCK--EERSYTVEDQENA--------RLKDLCKKWNSICNSIHR 491
Query: 496 NFHPSSLGHERIVPVPLSMTGLYNSNLLARQP-FQPKVQLNRNLGDTLQLNSNMVSSQ-- 552
PS L + + + S + + + L ++ FQ QLN ++S Q
Sbjct: 492 --QPSILDKQDLFVLSSSPSSPTSFSSLEKKSNFQHS-----------QLNWPIISEQEK 538
Query: 553 -PAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHES--- 608
P E + S D ++ P++ +P D L +S P E+
Sbjct: 539 VPKECELLYTESAGGDDDGCYDGNLIMFMPQRNVPKP--DLLSNPNSSPNSASSSEAVDG 596
Query: 609 -QNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR-----RGAGS 662
++ +L + ++ K L +L K +E +A+TV C+ G KR +
Sbjct: 597 LESTELFNEHNEENLKILCDALENKFPQHKEIIQEIASTVLFCRSGMRKRGNNFFKRENH 656
Query: 663 KGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLG-----------PRRDHEEPEVR 711
K + W+ F+G D ++ ++ L+++V G+ + +G D + R
Sbjct: 657 KQETWMFFLGDDSQARENISKELAKVVFGSCNNFMTIGMSTFSSLGNDDSSSDEKSKRKR 716
Query: 712 VR---GKTALDKIGEAVKRNPFSVILLEDI-DEADMVVRGNIKRAMERGRLVDSYGREIS 767
R G T L + EAV NP V +ED+ +E D + IK+A+E G + G +
Sbjct: 717 PRAELGSTYLQRFCEAVNENPHRVFFMEDLEEEVDHFTQKGIKKAIECGSITIPGGESVP 776
Query: 768 LGNVIFIL 775
L + I I
Sbjct: 777 LKDAIVIF 784
>gi|356564815|ref|XP_003550643.1| PREDICTED: chaperone protein ClpB1-like [Glycine max]
Length = 1010
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 275/867 (31%), Positives = 402/867 (46%), Gaps = 186/867 (21%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MR+G+ T+QQTLT EAASVL HS+ A RR H Q TPLHVAATLL+ LR+AC+KS
Sbjct: 1 MRSGVCTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRGSSLRRACLKSS 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGL--DPPISNALMAALKRAQAHQRRGCP 118
S HPLQCRALELCF+VAL RLPT SP + P +SNAL+AALKRAQAHQRRGC
Sbjct: 61 QASHHPLQCRALELCFNVALNRLPTTP---SPLIHTQPSLSNALIAALKRAQAHQRRGCI 117
Query: 119 E-QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIE----------QSL 167
E QQQQPLL +KVELE LIISILDDPSVSRVMREA FSS AVK IE Q
Sbjct: 118 EQQQQQPLLTIKVELEHLIISILDDPSVSRVMREAGFSSTAVKNHIEDSNSPQYSVFQCY 177
Query: 168 NSS-------CS------------VSNSSPIGLGFRPSSRNL-------------YMNPR 195
NSS CS +N++P FR ++R+ + P+
Sbjct: 178 NSSGGVFSSPCSPSASENNNHRETATNNNPT--NFRHTTRHFLTSYASEFHPSLVFSPPK 235
Query: 196 LQQAGGVCGGQSEPE--------------------MVVRESLA-----------KIESKE 224
+ G S ++V +SL+ ++E E
Sbjct: 236 NAPVCSITGAASSSSKDDDVRLVLDILLRKKKKNTVIVGDSLSLTEGLVGEIMGRLERSE 295
Query: 225 LDGVLKNVQIIRLD---KDFTCDKAGIVS-KLKDLGALIETKFGNGDGVILDLGDLKWLV 280
+ LK++ I+ +C K V KL +L + + G G I +GDLKW V
Sbjct: 296 VPDELKSIHFIKFQISHVSLSCMKRDEVEMKLLELERKVNSIASGGGGGIFYIGDLKWTV 355
Query: 281 EQQVTS---FGVPNSGTLQQQQQVLAEVVAEIGKLVARFG-GGGGRLWLIGTATCETYLR 336
E+ S G PN G + V +V+EIGKL G ++WL+ TA+ +TY+R
Sbjct: 356 EEASLSEKEEGSPN-GEVSGYNPV-DHLVSEIGKLFCDCGTSNNAKVWLMATASYQTYMR 413
Query: 337 CQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALP 396
CQ+ P +E W LQAVP+ P G+ L + +L S + + + L
Sbjct: 414 CQMRQPPLEKQWALQAVPV----PSGGLGLSLHAPSVLDSKM-------TISHNQSQVLE 462
Query: 397 RRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAH 456
+ N++ +++CC +C NYE+E + + +K LP WL ++H
Sbjct: 463 TKPFGNMEQEDKLNCCEECASNYEKEAQFIRPDQKKR------------LPFWL---QSH 507
Query: 457 DGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSL--GHERIVPVPLSM 514
+D +K +L+ +L++KWN C H + P + + P S+
Sbjct: 508 ITED-------HKKDELV------QLKRKWNRLCHCLHQSKQPQNQWNWNHNSYNSPSSI 554
Query: 515 TGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVSPLNSP-VRTDLVLGR 573
+ N+ + P+ + ++ +++P ++ + V+T L LG
Sbjct: 555 SFASNATHGSTSKLVPRFRRQQSCIIEFNFGKKREATEPVLDSLESMEGKEVKTTLALGN 614
Query: 574 SKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKV 633
ESA +G I+ + LQ+ + K L E V
Sbjct: 615 GGSGESA------------VGDIT------------DTTLQRA-------HICKLLQENV 643
Query: 634 WWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGAS 693
WQ E ++A + K S WLL G D +GK+++A A++E V G++
Sbjct: 644 PWQSETFPSIAEALIDSK------SAKESNNITWLLMQGNDTIGKRRLALAIAESVFGST 697
Query: 694 PIMIPLGPRRDHEEPEVRVRGKTALDKIGE----AVKRNPFSVILLEDIDEADMVVRGNI 749
+++ ++ +T++ E A+K + V+L+E++D AD + +
Sbjct: 698 NLLLQFD----------MLKRETSIAPFSEMLEGALKTHHQLVMLIENVDFADAQFKKFL 747
Query: 750 KRAMERGRLVDSYGREISLGNVIFILT 776
E G ++ E S VIFILT
Sbjct: 748 CDGFETGNF-GNFTEENS-SQVIFILT 772
>gi|356569527|ref|XP_003552951.1| PREDICTED: uncharacterized protein LOC100776148 [Glycine max]
Length = 1097
Score = 309 bits (791), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 317/1109 (28%), Positives = 495/1109 (44%), Gaps = 198/1109 (17%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +ST +Q LT EAA L+ +++ A RR+H QTT LH + LL+ PS LR AC +
Sbjct: 1 MPTPVSTARQCLTDEAARALDDAVSVARRRSHAQTTSLHAVSALLSLPSASLRDACSRCR 60
Query: 61 PNSSHP-LQCRALELCFSVALERLPTAQQN---VSPGLDPPISNALMAALKRAQAHQRRG 116
S P LQ RALEL V+L+RLPT + + PP+SN+LMAA+KR+QA+QRR
Sbjct: 61 SCSYSPRLQLRALELSVGVSLDRLPTTKSSGGGGGGEEGPPVSNSLMAAIKRSQANQRRH 120
Query: 117 CPEQQQQPLLA---------VKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS- 166
P+ + +KVEL+ I+SILDDP VSRV EA F S +K + Q
Sbjct: 121 -PDSFHLMQMMQQQQQTTSLLKVELKHFILSILDDPIVSRVFAEAGFRSYDIKLALLQPP 179
Query: 167 ---------LNSSCSVSNSSPIGLG-FRPSSRNLYMNPRLQQAGGVCGGQSEPEMVVRES 216
L + N P+ G F+P SR ++ ++ V +++ ++
Sbjct: 180 PPPSRIFSRLTPPVFLCNLEPVQTGSFQPGSR---LDENCRRIVEVVARKTKRNPLLMGV 236
Query: 217 LAKIESKELDGVLKNVQIIRLDKDFTCDKAG--IVSKLKDLGALIETKFGNGDGVILDLG 274
AK + V+KN + L C+ G +VS K++G + G G+ +
Sbjct: 237 YAKTSLRSFVEVVKNGKGGVL----PCELNGLSVVSVEKEIGEFLREG-GRGEKI---FE 288
Query: 275 DLKWLVEQ----QVTSFG---VPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIG 327
+ LVEQ V FG V G ++ + VV+++ +L+ G GG++WL+G
Sbjct: 289 HVSRLVEQCGAGVVVCFGEIEVFVGG--NNEEGDVGFVVSQLTRLL---GIHGGKVWLLG 343
Query: 328 TA-TCETYLRCQVYHPSMENDWDLQAVPIAAKTP-LSGMFPR---LGS----NGILSSSV 378
A T E Y + P+++ DWDL + + + TP + G++P+ +GS G S+
Sbjct: 344 VAGTSEAYSKFLRLFPTVDKDWDLHLLTMTSATPSMEGLYPKSSLMGSFVPFGGFFSTPS 403
Query: 379 ESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVK 438
E SPL T A++L R C C + EQE+A + K +S+
Sbjct: 404 EFKSPLSC---TNASSLSR--------------CDSCNEKCEQEVADILKVGPATSASGY 446
Query: 439 SEVARPLLPQWLHNAKAHDGD-------DKTAEQTENKDQDLIWKQKSQELQKKWNDTCL 491
S + P WL D D ++ + +++ +K LQ+KW+D C
Sbjct: 447 SSTSLP----WLQKVNV-DSDRRLDVAKNELHHPVQTNEENTSLNKKIFGLQRKWSDICQ 501
Query: 492 NQHPN----------------------FHPSS-----LGHERIVPVPLS-MTGLYNSNLL 523
H N F P S L E P +S M+ + S
Sbjct: 502 RLHQNRSLPEFDITKARFQATSHEGFQFGPGSSSKGPLHSEIQYPNQISYMSKVSQSAFP 561
Query: 524 ARQ------PFQ-----------PKVQLNRNLGDTLQLN--SNMVSSQPAERAVSPLNSP 564
+Q PF PKV + G + + +NM P S +P
Sbjct: 562 FKQILPVSVPFDTVSITDEADHIPKVSKSHMHGTWISPSPKANMSLLDP---TTSSSLTP 618
Query: 565 VRTDLVLGRSKVLESAPEK-------THIEPVKDFLGCISSEPPQNKLHESQNDQLQKP- 616
V TDL LG + SA + H +P+ +S++ + ++ES + Q+ +
Sbjct: 619 VTTDLGLG--TIYTSAAHEPDTPKLSDHKKPLHHLSDSLSTD--FDAMNESTSHQIARSS 674
Query: 617 ----------LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR-RGAGSKGD 665
+ FK L EKV WQ EA A+ TV++C+ GKR G+ + D
Sbjct: 675 SCSGPNLEGRFETVDFKSFYHLLTEKVGWQDEAIYAINRTVSRCRSCAGKRSSGSHVRAD 734
Query: 666 MWLLFMGPDRVGKKKMASALSELVSGASPIMIPLG-PRRDHEEP-------------EVR 711
+WL F+GPDR+GK+K+ASAL+E++ G +I + +D P +V
Sbjct: 735 IWLAFLGPDRLGKRKVASALAEILFGNKQSLITVDLSSQDRSYPTNSIFEFQNTYCHDVL 794
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
+R KT LD + + + P SV+ LE++D+AD +V+ ++ +A++ G+ S+GREIS+ N
Sbjct: 795 MR-KTVLDYVAGELSKKPHSVVFLENVDQADFLVQNSLFQAIKTGKFPYSHGREISINNA 853
Query: 772 IFILTADWLPDSLKFLSQG--ITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEER 829
+FI+T+ S F +G E+++ + QL L + KR
Sbjct: 854 MFIVTSSVFKGSGSFSLEGDPKMFPEERILEAKRCQMQLSLGHASEDAKRSGC----TNV 909
Query: 830 STKPRKETGSGLSFDLNKAADVGDDK------------DGSHNSSDLTVDHEEEHGFTNR 877
RK T + K + GD K + S + DL + EE N
Sbjct: 910 KVAQRKGTSKTTFLNKRKLIESGDSKEKASCKTLKQVGEASRSYLDLNMPLEEVEEGNN- 968
Query: 878 LLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEA 937
+ DL + VD +VFKP +F I V +I +F ++G +EI E
Sbjct: 969 -YNDYESDAWLNDLCDQVDEKVVFKPFNFDSIAEKVIKSIDTQFQKMLGSEFILEIEYEV 1027
Query: 938 LEKLVGGVWLG--RTGLEDWTEKVLVPSL 964
+ +++ WL + +EDW E VL SL
Sbjct: 1028 MTQILAAAWLSDKKKAVEDWVEHVLGRSL 1056
>gi|255583564|ref|XP_002532538.1| conserved hypothetical protein [Ricinus communis]
gi|223527727|gb|EEF29832.1| conserved hypothetical protein [Ricinus communis]
Length = 882
Score = 308 bits (789), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 257/866 (29%), Positives = 394/866 (45%), Gaps = 157/866 (18%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQ LT EAA+V+ ++ A RR H Q TPLHVA T+L+S +G LR AC++SH
Sbjct: 1 MRAGGCTVQQALTTEAATVVKQAVTLARRRGHAQVTPLHVANTMLSSSTGLLRTACLQSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD----PPISNALMAALKRAQAHQRRG 116
SHPLQC+ALELCF+VAL RLP + + G P ISNAL+AA KRAQAHQRRG
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASTSSPVLGTHAQQYPSISNALVAAFKRAQAHQRRG 117
Query: 117 CPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNS 176
E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VK+ +EQ+++ NS
Sbjct: 118 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQNS 177
Query: 177 SPIGLGF----------------RPSSRNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKI 220
+P+ + +R + + + E M V E+L
Sbjct: 178 APVSSSKSKESNNNNSVLALSHTQVGARTSCRSSPTTSTTSLDPIRKEDVMSVIENLINK 237
Query: 221 ESK----------ELDGVLKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKFGNGDGVI 270
+ L+GV+K V +DK D + ++K + + + V
Sbjct: 238 RKRSVVIVGECLVSLEGVVKGV----MDKVIKGDVPEALKEVKFISFPLSSLGHLSSRVE 293
Query: 271 LD--LGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGG-------GGG 321
+D L +LK + ++ V N G L+ + A ++ + ++ G G
Sbjct: 294 VDQKLEELKVHIRSYLSKGVVLNLGDLKWVVEYRANNLSPMEHMIMEIGKLASGISENNG 353
Query: 322 RLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESL 381
+ WL G AT +TY++C+ +PS+E W L A+ I A + + SN +
Sbjct: 354 KFWLTGIATFQTYMKCKSGNPSLETVWGLHALTIPAGSLRLSLIT--DSNKVGQDGSRCW 411
Query: 382 SPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEV 441
L+ + ++++CC C +E E L +SS+
Sbjct: 412 IMLEG-----------------EEEKQLTCCVDCTSKFENEARSL-----QSSTSNSDST 449
Query: 442 ARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCL---------- 491
LP WL K + N DQD + ++L KKWN C
Sbjct: 450 TTSTLPAWLQQYKN-----ENQGVNNNNDQDCV---SIKDLCKKWNSICSSIHQKPYSSE 501
Query: 492 --------------------NQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPFQPK 531
+Q+PNFH + H+R PV S + +
Sbjct: 502 KTITFSSVSPSSFTSSFSYDHQYPNFHHTY--HQRDWPVVESKQSWRDHHFWVG------ 553
Query: 532 VQLNRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKD 591
+T+ ++ +S +P+ R P ++ + P+ T P
Sbjct: 554 -------SETVNKINSCISIEPSLRMYIPEHNR-------------DQYPKPTI--PFSS 591
Query: 592 FLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCK 651
+ + + E ++ K ++ ++ K L +L +KV WQ++ +A+T+ QC+
Sbjct: 592 NPNSTPNSTSSSDVMEMEHLNKFKEMNAENLKILCNALEKKVTWQKDIIPDIASTILQCR 651
Query: 652 LGNGKRRGA--------GSKGDMWLLFMGPDRVGKKKMASALSELVSGA------SPIMI 697
G +R+G +K + WLLF G D K+K+A L++L+ G+ +
Sbjct: 652 SGMVRRKGKVTRNSSTEQAKEETWLLFQGVDVEAKEKIAKELAKLIFGSQNNFISISLSS 711
Query: 698 PLGPRRDHEEPEVRVRGK-----TALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRA 752
R D E R + + +++ EAV NP V L+ED+++AD + KRA
Sbjct: 712 FSSTRADSTEDCRNKRSRDEQSCSYIERFAEAVSSNPHRVFLVEDVEQADYCSQVGFKRA 771
Query: 753 MERGRLVDSYGREISLGNVIFILTAD 778
+ERGR+ + G E+ L + I IL+ +
Sbjct: 772 IERGRITNVKGEEVGLSDAIIILSCE 797
>gi|356498951|ref|XP_003518309.1| PREDICTED: uncharacterized protein LOC100804458 [Glycine max]
Length = 1097
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 302/1098 (27%), Positives = 470/1098 (42%), Gaps = 184/1098 (16%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +S +Q LT EAA L+ ++A A RR+H QTT LH + LLA PS LR AC ++
Sbjct: 1 MPTPVSIARQCLTDEAARALDDAVAVARRRSHAQTTSLHAISALLALPSSALRDACGRAR 60
Query: 61 PNS-------SHPLQCRALELCFSVALERLPTAQQNVSPGLD--PPISNALMAALKRAQA 111
+ S LQ RALEL V+L+RLP+++ + + G D PP+SN+LMAA+KR+QA
Sbjct: 61 SGAARFSATYSPRLQFRALELSVGVSLDRLPSSK-STAGGSDEEPPVSNSLMAAIKRSQA 119
Query: 112 HQRRGCPEQ---------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKAT 162
+QRR PE +KVEL+ ++SILDDP VSRV EA F S +K
Sbjct: 120 NQRRH-PESFHMFQQSQQGTTTTSFLKVELKHFVLSILDDPIVSRVFAEAGFRSCDIKLA 178
Query: 163 --------IEQSLNSS-----CSVSNSSP---IGLGFRPSSRNLYMNPRLQQAGGVCGGQ 206
++ N S C++ + P I +R NP L +
Sbjct: 179 LLQPPLPPVQHRFNRSPPVFLCNLDPARPDENIRRILEVLARKNKRNPLLMGVYAKNALR 238
Query: 207 SEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKFGNG 266
EMV + EL V +I K + +LK+L E +G
Sbjct: 239 GFVEMVRNGRGGSVLGSELRVVCLEREIGEFVKKGGSGEEKFGVRLKEL----EQCESSG 294
Query: 267 DGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLI 326
GV++ G+++ + V + V + + +L+ G ++ L+
Sbjct: 295 SGVVVSFGEIEVFLGDDV-------------DVDAVRFVFSGLTRLLEI---RGEKVSLL 338
Query: 327 GTA-TCETYLRCQVYHPSMENDWDLQAVPIAAKTP-LSGMFPRLGSNGILSSSVESLSPL 384
G A T Y + P++ENDWDL + + + TP + G++ + SS + S P
Sbjct: 339 GVAETSHAYSKLLGLFPNVENDWDLHLLTVTSATPSMEGLYSK-------SSLMGSFVPF 391
Query: 385 KSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARP 444
F T P VS P R C C + EQE+A L K V +
Sbjct: 392 GGFFSTPEIRSP--VSCTNAPFTR---CDTCNKKCEQEVADLLK--------VGPSSSNS 438
Query: 445 LLPQWLH---NAKAHDGDDKTAEQ----TENKDQDLIWKQKSQELQKKWNDTCLNQH--- 494
WL N + H G D + + +++ K QKKWND C H
Sbjct: 439 TSSPWLQKVVNVETHRGSDAAKNELHHLVQTNEENTSLNDKILGFQKKWNDICQRLHHTS 498
Query: 495 -----------------------PNFHPSSL---GHE------RIVPVPLSMTGLYNSNL 522
P+F SS H +I +P + G++ S
Sbjct: 499 SLPQFDISQTRSQSPTLEVSRFGPDFKESSSKDPSHNEFQYSSQISYMPKELHGIFPSKQ 558
Query: 523 LARQPFQPKVQLNR------NLGDTLQLNSNMVSSQPAERAVSPL------NSPVRTDLV 570
L+ V +N + +TLQ++ + P+ A + +SP R
Sbjct: 559 LSVPLPSDTVSINTGTDHVLKVSETLQIHMKTPWAAPSLMANKSVLDHRSSSSPTRVTTD 618
Query: 571 LGRSKVLESAPE----------KTHIEPVKDFLGCISSEPPQNKLHES-----QNDQLQK 615
LG + S + + H++ + D + +N H + L+
Sbjct: 619 LGLGTLYTSTAQDPDTPKLQDQRKHLQRLSDSVSTDCDGTNENTSHRTARSSCSGSNLEG 678
Query: 616 PLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDR 675
D FK L + L EKV WQ +A A++ T++ CK G GKRRG+ + D+WL F+GPDR
Sbjct: 679 KFDLADFKSLNRLLNEKVGWQDQAIRAISQTLSLCKSGAGKRRGSHGRADIWLAFLGPDR 738
Query: 676 VGKKKMASALSELVSGASPIMI-----------PLGPRRDHEEPEVR--VRGKTALDKIG 722
+GK+K+ASAL+E + G +I PL ++++ +R KT LD I
Sbjct: 739 LGKRKIASALAETIFGNPESLISVDLGFQDGFYPLNSVFEYQKSRCYDVLRRKTILDYIA 798
Query: 723 EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPD 782
+ + P SV+ LE++D+AD++V+ ++ +A+ G+ S+GR IS+ N IF++T+
Sbjct: 799 GELSKKPHSVVFLENVDKADVLVQNSLLQALRTGKFSYSHGRAISINNTIFVVTSTVCKG 858
Query: 783 SLKF-LSQGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGL 841
+ F L + E+++ + QL + + KR + PRK
Sbjct: 859 NDSFVLEESKMFSEERMLEAKRCQMQLLIGRASEDAKR----IGGTNVKVVPRKGFSKSS 914
Query: 842 SFDLNKAADVGDDKDG------------SHNSSDLTVDHEE-EHGFTNR----LLMTPST 884
S + K AD+ D K+G S + DL + EE E G + M+ +T
Sbjct: 915 SLNKRKQADISDSKEGATSKMQKQDSEASRSFLDLNMPVEEGEEGVNDNDHESESMSENT 974
Query: 885 STPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGG 944
D + +D +VFKP +F + V I F G L +EI E + ++
Sbjct: 975 DAWLSDFFDQIDEKVVFKPFNFNELAEQVLKRIGMLFQRTFGSELQLEIDHEVIAYILAA 1034
Query: 945 VWLG--RTGLEDWTEKVL 960
WL + +EDW E VL
Sbjct: 1035 AWLSDKKNAVEDWIEHVL 1052
>gi|449441584|ref|XP_004138562.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216395
[Cucumis sativus]
Length = 1123
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 319/1146 (27%), Positives = 485/1146 (42%), Gaps = 245/1146 (21%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +S +Q L P+ A A RR H QTT LH + LL+ PS LR AC ++
Sbjct: 1 MPTAVSLARQCLAPDXAV--------AHRRGHAQTTSLHAISALLSLPSSALRDACARAR 52
Query: 61 PNSSHP--LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCP 118
+++ LQ +ALELC SV+L+R+P+ Q + DPP+SN+LMAA+KR+QA+QRR P
Sbjct: 53 KTTAYSPRLQFKALELCLSVSLDRVPSTQISD----DPPVSNSLMAAIKRSQANQRRQ-P 107
Query: 119 EQ--------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ---SL 167
E Q + VKVEL+ ++SILDDP VSRV EA F S +K I + L
Sbjct: 108 ENFHLYHQLSHQSSIACVKVELQHFLLSILDDPVVSRVFGEAGFRSSEIKLAIIRPFPQL 167
Query: 168 NSSCSVSNSSPIGL-------------------GFRPSSRNLYMNPRLQQAGGVCGGQSE 208
S S P+ L GFR N N R+ + G G++
Sbjct: 168 LRYTSRSRGPPLFLCNLMDCSDPNRRGFLFPLSGFRDGDNN-DNNRRIGEVLGRNRGRN- 225
Query: 209 PEMV----------VRESLAKIESKELDGVLKNVQIIRLDKDFTCDKAGIVSKLKDLGAL 258
P +V ++ K L L V+ I L+ DF+ +S+ ++G+L
Sbjct: 226 PLLVGVSAYVALKGFTNAIEKRNDNFLPEELAGVRTICLENDFS----RYLSENSEMGSL 281
Query: 259 IETKF---------GNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEI 309
KF G+I++ GDLK V + T + VV ++
Sbjct: 282 -NMKFVEVVQMVEQSPKPGLIVNFGDLKAFVGENST-------------DDRASHVVGQL 327
Query: 310 GKLVARFGGGGGRLWLIGTATC-ETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRL 368
KLV G ++WLIG A+ ETYL PS+E DWDL +PI + P S +PR
Sbjct: 328 KKLV---DVHGDKVWLIGAASSYETYLSFVTKFPSIEKDWDLHLLPITSLRPES--YPR- 381
Query: 369 GSNGILSSSVESLSPLKSAFQTTA-AALPRRVSENLDPARRMSCCRQCLQNYEQELAKLS 427
SS + S PL F T + A +P VS P+R C QC ++ E+E+ S
Sbjct: 382 ------SSLMGSFVPLGGFFSTPSDATIPLNVSYQ-HPSR----CLQCDKSCEEEVIAAS 430
Query: 428 KEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAE-------------------QTEN 468
K + SE + LP W+ + + D A+ +
Sbjct: 431 KGV---FTPPLSEQYQSSLPSWMQMTELSNFDAFDAKIEAIYLSISILFISHSSWCFVQT 487
Query: 469 KDQDLIWKQKSQELQKKWNDTCLNQHPN--------------FH---------------- 498
+D L+ K QKKW++ C H FH
Sbjct: 488 RDDGLVLSAKIAGFQKKWDNICQRLHHGPPLKEAPMFPTVVGFHATEDKREDAAVINSST 547
Query: 499 ----------PSSLGHERIVPVPLSMTGLYNSNLL------ARQPFQPKVQLNRNLGDTL 542
P+ L + +P L SN + + F K+Q + L
Sbjct: 548 SACASSHKDSPTDLNSRNFMDLP--KVSLLRSNTFPLSGKASNENFLSKLQEGTPKIENL 605
Query: 543 QLNS-------NMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVK----- 590
+L S ++ S R SP V TDL LG + S K + P
Sbjct: 606 ELRSRNSPFSLSISSVDDENRTSSPSAGSVTTDLGLGIVSLPTSYKLKKPLNPKSADFPS 665
Query: 591 DFLGCISSE-------------PPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQ 637
D GC S+ P + + +D S RLLK E+V+WQ
Sbjct: 666 DLSGCCSTNVDLVNGRVCNGFTPSSSCSSSPEQRGQVNAMDVKSLFRLLK---ERVFWQD 722
Query: 638 EAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMI 697
+A S ++ T++Q +R G+ +GD+W F+GPD+ GKK++ A++E++ G I
Sbjct: 723 QAVSIISQTISQ-----RQRHGSNLRGDIWFNFVGPDKFGKKRVGIAVAEIMYGNKDQFI 777
Query: 698 ------------PLGPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVV 745
P PR E R GKT LD + +++ P S+++LE++D+A+++
Sbjct: 778 CVDLSSQDGMVNPNTPRVRSYSAEFR--GKTVLDFVAAELRKQPLSIVMLENVDKAELLD 835
Query: 746 RGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFL---SQGITLDEKKLTSLA 802
+ + +A++ G+L D GRE+S+ N IF+ T L + Q + EK+L L
Sbjct: 836 QNRLSQAIQTGKLSDLQGREVSIKNAIFMTTTTSLITEHQITFPNKQMLKYSEKRL--LK 893
Query: 803 SGEWQLRLSIR---GKTTKRRASWLDEEERST---------KPRKETGSGLSFDLNKAAD 850
+ W LR+ + G T R + D E +ST K GS ++++
Sbjct: 894 AKSWPLRIQVASSFGDQTNRSKTVSDTERKSTPNPFFMSKRKLNVIDGSSDHHEISEMVK 953
Query: 851 VGDDKDGSHNSSDLTVDHEE--EHGFTNRLLMTPSTSTPS----QDLLNSVDSAIVFKPV 904
+ S+ DL EE +H STS S Q+ N +D +VFKP
Sbjct: 954 RSNKTPTSNKFPDLNRPAEENPQHDIDGDWTDNDSTSEISKTWLQEFCNHIDQVVVFKPF 1013
Query: 905 DFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWL--GRTGLEDWTEKVLVP 962
DF + + + K F S+ G +EI +E+L+ ++ G ++DW E+VL
Sbjct: 1014 DFDGLAEKIQKDVKKIFHSVFGPEYMLEIDSMVMEQLLAAAYISYGNKDVDDWMEQVLSR 1073
Query: 963 SLHQLK 968
++K
Sbjct: 1074 KFLEVK 1079
>gi|357490799|ref|XP_003615687.1| ATP-dependent Clp protease ATP-binding subunit clpL [Medicago
truncatula]
gi|355517022|gb|AES98645.1| ATP-dependent Clp protease ATP-binding subunit clpL [Medicago
truncatula]
Length = 1092
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 316/1115 (28%), Positives = 492/1115 (44%), Gaps = 223/1115 (20%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKS- 59
M +S+ +Q LT EAA L+ ++A A RR+H QTT LH + LL+ PS LR A ++
Sbjct: 1 MPTPVSSARQFLTDEAARALDDAVAVARRRSHAQTTSLHTISALLSLPSSSLRDAICRAR 60
Query: 60 ----HPNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRR 115
P+ SH L RALEL V+L+RLP+++ SP +PP+SN+LMAA+KR+QA+QRR
Sbjct: 61 TAVRFPSFSHRLHLRALELSVGVSLDRLPSSKP--SPVEEPPVSNSLMAAIKRSQANQRR 118
Query: 116 GCPEQQQ-------QPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK-ATIEQSL 167
PE P L +KVEL+ ++SILDDP V+RV EA F S VK A ++ +
Sbjct: 119 S-PESFHFYNHNGTTPSL-LKVELKHFVLSILDDPIVNRVFSEAGFRSCDVKLALLQPPV 176
Query: 168 NSSCSVSNS---------------SPIGLGFRPSSRNLY---------MNPRLQQAGGVC 203
SS +S +P LG +SR + MNP L
Sbjct: 177 QSSSRFLSSPPVFLCNLEPGRTGLTPFPLGVDENSRRIAEVIAMKGKKMNPLLMGVYAKD 236
Query: 204 GGQSEPEMVVRESLAKIESKELDG---VLKNVQIIRLDKD-FTCDKAGIVSKLKDLGALI 259
++ E++ + + + G V +I+ KD + +K G+ + K++G +
Sbjct: 237 AFRNFVELLQKGLGGGLFPPGMSGLSVVCVEKEIVEFVKDGGSEEKMGL--RFKEVGCEV 294
Query: 260 ETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGG 319
E G GV++ G+++ LV V + G ++ VV+E+G+L+ +
Sbjct: 295 EKCLGA--GVVVGFGEIEVLVGDDV------DGGCIKF-------VVSELGRLLEVY--- 336
Query: 320 GGRLWLIGTA-TCETYLRCQVYHPSMENDWDLQAVPIAAKTP-LSGMFPR---LGS---- 370
G ++WL+G A T E Y + P +E DWDL V + + TP + G++ + +GS
Sbjct: 337 GEKVWLMGVAETSEAYSKFLRLFPGVEKDWDLHLVTVTSATPSMEGLYSKSSLMGSFVPF 396
Query: 371 NGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEF 430
G S+ ES SP+ SA A+ R C +C + YEQE+A F
Sbjct: 397 GGFFSTPPESKSPISSA----NASFTR--------------CDKCNEKYEQEVA---DAF 435
Query: 431 EKSSSEVKSEVARPLLPQWLH---NAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWN 487
+ + + S L W + H G D EN + K QKKWN
Sbjct: 436 KVDPATLASNYTTSL--PWFKKVVDVDTHGGLDVAKVNEENTSLN----DKILGFQKKWN 489
Query: 488 DTCLNQH------PNFHPSSLGH---------------ERIVP---VPLSMTGLYNSNLL 523
D C H P+ G +R P +P + G + S L
Sbjct: 490 DICQRLHQARSHVPSLEVLRFGSGFNEGSSKDSSLNELQRSSPFSYMPKELHGTFPSKHL 549
Query: 524 ARQPFQ-------------PKV-QLNRNLGDTLQLN-SNMVSSQPAERAVSPLNSPVRTD 568
+ P PKV + +N T L S M + E S PV TD
Sbjct: 550 SPTPVHTGRVSVNVGTDRVPKVTETQQNDMTTPWLAPSRMANMSVLENKSSSSLIPVTTD 609
Query: 569 LVLG-------------------RSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQ 609
L LG + K E PE T + V G S + ++ S
Sbjct: 610 LGLGTLYTSTPIAHKPDTSEFQDKIKHFEHFPESTSADSVA-VNGNTSHKIARSSFPAS- 667
Query: 610 NDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLL 669
+ D FK L K L EKV WQ +A + T++ K G GK R + D+W
Sbjct: 668 --NMATKFDSVDFKSLNKLLFEKVGWQNQAICDINRTLSLHKSGEGKSRDLHGRADIWFA 725
Query: 670 FMGPDRVGKKKMASALSELVSG--ASPIMIPLGPRRDHEEP------------EVRVRGK 715
F+GPDR+GKKK+ASAL+E + G S I + LG + P ++ +R K
Sbjct: 726 FLGPDRIGKKKIASALAETIFGNTESIISLDLGFQDGLYPPNSIFECQKSLCYDLFIR-K 784
Query: 716 TALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFIL 775
T +D I + +NP SV+ LE++D+AD +V+ ++ +A+ RG+ DS GREIS+ N IF+L
Sbjct: 785 TVVDYIAGELSKNPHSVVFLENVDKADFLVQSSLLQAIRRGKFPDSRGREISINNAIFLL 844
Query: 776 TADWLP-DSLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTKR--------------- 819
++ + L +G E+ + + QL L + KR
Sbjct: 845 SSTVCKGNGSSALVEGNLFSEETILEAKRCQMQLLLGDTSEDAKRSFSTNVKIVRRKGFS 904
Query: 820 RASWLDEEERSTKPRKETGSG------------LSFDLNKAADVGDDKDGSHNSSDLTVD 867
+ S++++ +R+ + G+ DLN D G++ N+ D
Sbjct: 905 KPSFMNKRKRADTSDFKEGAASKMQKQVCETSMSCLDLNMPLDEGEEGMDEDNN-----D 959
Query: 868 HEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGD 927
HE R + ++ + D + +D +VFKP DF + + +I+ +F G
Sbjct: 960 HE-------RDFVVENSDSWFSDFCDKMDEKVVFKPFDFDALAEQLLKSISIQFEKAFGS 1012
Query: 928 ALSIEILDEALEKLVGGVWLG--RTGLEDWTEKVL 960
+E+ E + +++ WL + +++W E VL
Sbjct: 1013 EFQLEVNYEVMAQILAAAWLADKKDAVDNWVESVL 1047
>gi|341605679|gb|AEK84225.1| heat shock protein-related protein [Cucurbita maxima]
Length = 782
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 287/907 (31%), Positives = 411/907 (45%), Gaps = 213/907 (23%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLAS---PSGYLRQACI 57
MR+G QQTLTPEAASVL HS++ A+RR H TPLHVA+TLL++ P LR+AC+
Sbjct: 1 MRSGTCAAQQTLTPEAASVLKHSLSLAARRGHSHVTPLHVASTLLSNNSKPPTLLRRACL 60
Query: 58 KSHPNSSHPLQCRALELCFSVALERLPTAQQNVSPGL---DPPISNALMAALKRAQAHQR 114
KSHP HPLQ RALELCF+VAL RLP+ SP L P +SNAL+AALKRAQAHQR
Sbjct: 61 KSHP--PHPLQSRALELCFNVALNRLPS-----SPPLLHSPPSLSNALIAALKRAQAHQR 113
Query: 115 RGCPEQQQQ-----------PLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATI 163
RG PLL VKVEL+ LIISILDDPSVSRVMREA FSS AVK I
Sbjct: 114 RGSSSSSSSLDHHHQQQQQHPLLTVKVELQHLIISILDDPSVSRVMREAGFSSTAVKTNI 173
Query: 164 EQ-----SLNSSCSVSNSSPIGLGFRPSSRNLYM-------------------------- 192
E+ + N++ +S SPI F + N Y
Sbjct: 174 EEYNDNNNNNNTIFISPPSPISSHFFSAQTNSYTPFFFSSSSPPPPPTTDATKLVFEAFL 233
Query: 193 ---NPRLQQAGGVCGGQ-SEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFTCDKAGI 248
N L+ V G E VV E + K++ E+ +K V+ + +F G
Sbjct: 234 GKNNNNLRTNVVVVGDSVGLTEGVVFEVMRKVKMGEVPEAMKGVKFV----EFLPLMKG- 288
Query: 249 VSKLKDLGALIETKFGNGD-GVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVA 307
S LK LG ++ NGD GV++ +GDLKW+VE NS +++ +V
Sbjct: 289 SSSLK-LGEYVK---DNGDGGVLVYVGDLKWIVEGG-------NSDEIER-------LVG 330
Query: 308 EIGKLV------ARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPL 361
EI +L+ A G ++W++G A+ + Y+RCQ+ P++E W L AVP+ P
Sbjct: 331 EIERLLKGDFLNANNNGSKAKIWVMGMASYQIYMRCQMRQPALETQWSLHAVPV----PS 386
Query: 362 SGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQ 421
SG+ L ++ + S S Q A + +++CC +C N+E
Sbjct: 387 SGLGLTLHTSSVYDSRPSFFSQTMETKQFIAK----------EEHEKLTCCAECTSNFEN 436
Query: 422 ELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQE 481
E+ L K F+ +P WL + Q+ +KD+ + E
Sbjct: 437 EVQHL-KSFQSKQ-----------VPSWLQQYNVN--------QSHSKDEFV-------E 469
Query: 482 LQKKWNDTC--LNQHPNFHPSSL---GHERIVPVP----------LSMTGLYNSNLLARQ 526
L+KKWN C L+ H + SL P +S T L
Sbjct: 470 LRKKWNRFCSSLSLHRDXSAQSLMGKSFSYCSSYPWWPKIDESNSISFTDNQTPKPLQSS 529
Query: 527 PFQPKVQLNRNLGDTLQLN-SNMVSSQPAERAVSP-LNS-------PVRTDLVLGRSKVL 577
F P + ++ T++ + N + Q +R SP LNS V+ L LG
Sbjct: 530 NFVPPFRRQQSC-TTIEFDFGNATTKQSQDRESSPSLNSLKHMVGKEVKITLALGNPLFY 588
Query: 578 ESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQ 637
+S+ E +E E + ++ +LK L E V W
Sbjct: 589 DSSAESMEMES------------------ERKTER----------GEILKVLQENVPWLS 620
Query: 638 EAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMI 697
E+ ++A TV K N KR W+L G D +GK+KMA A++E V G+ +
Sbjct: 621 ESLPSIAETVISAK-KNEKR-------IQWILMEGNDFIGKRKMALAIAESVFGSIEFFL 672
Query: 698 PLGPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGR 757
L + + G + + + +A+K VIL+ED++ AD ++ E G+
Sbjct: 673 NLNSKSEE-------MGISRSEMVEKALKSTRKLVILVEDVEMADSQFMKFLEDGFESGK 725
Query: 758 LVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTT 817
+ +E + +IF+LT D DS D+KK +S ++ L I +
Sbjct: 726 FGEV--KEERIEKLIFVLTKD---DS---------SDKKKNRDSSSSVIEMALEIDAREK 771
Query: 818 -KRRASW 823
KR+A W
Sbjct: 772 HKRKAEW 778
>gi|145323770|ref|NP_001077474.1| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
gi|8954026|gb|AAF82200.1|AC067971_8 Strong similarity to an unknown protein F23F1.11 gi|7486038 from
Arabidopsis thaliana BAC F23F1 gb|AC004680. ESTs
gb|T75672, gb|N65732 and gb|AA404793 come from this gene
[Arabidopsis thaliana]
gi|332189971|gb|AEE28092.1| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
Length = 979
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 292/1049 (27%), Positives = 474/1049 (45%), Gaps = 173/1049 (16%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACI--- 57
M ++T ++ LT EAA L+ ++ A RR+H QTT LH + LLA PS LR+ C+
Sbjct: 1 MPTPVTTARECLTEEAARALDDAVVVARRRSHAQTTSLHAVSALLAMPSSILREVCVSRA 60
Query: 58 -KSHPNSSHPLQCRALELCFSVALERLPTAQQNVSPGL--DPPISNALMAALKRAQAHQR 114
+S P SS LQ RALELC V+L+RLP+++ SP DPP+SN+LMAA+KR+QA+QR
Sbjct: 61 ARSVPYSSR-LQFRALELCVGVSLDRLPSSK---SPATEEDPPVSNSLMAAIKRSQANQR 116
Query: 115 RGCPEQQQQPLLA------------VKVELEQLIISILDDPSVSRVMREASFSSPAVKAT 162
R Q + A +KVEL+ I+SILDDP V+RV EA F S +K
Sbjct: 117 RHPESYHLQQIHASNNGGGGCQTTVLKVELKYFILSILDDPIVNRVFGEAGFRSSEIKLD 176
Query: 163 IEQ----SLNSS-----------CSVSNSSPI-------GLGFRPSSRNL--------YM 192
+ L+S C++ NS P GF +SR +
Sbjct: 177 VLHPPVTQLSSRFSRGRCPPLFLCNLPNSDPNREFPFSGSSGFDENSRRIGEVLGRKDKK 236
Query: 193 NPRLQQAGGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDK-------DFTCDK 245
NP L G C ++ + K+ ++D + + +I ++K D + ++
Sbjct: 237 NPLLI---GNCANEALKTFTDSINSGKLGFLQMD--ISGLSLISIEKEISEILADGSKNE 291
Query: 246 AGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEV 305
I K+ DLG +E G+ G++L+LG+LK L + + ++L
Sbjct: 292 EEIRMKVDDLGRTVEQS-GSKSGIVLNLGELKVLTSEANAAL------------EILVSK 338
Query: 306 VAEIGKLVARFGGGGGRLWLIGTATC-ETYLRCQVYHPSMENDWDLQAVPIAAKTPLS-- 362
++++ K ++ +L IG + ETY + P++E DWDL +PI A T S
Sbjct: 339 LSDLLKHESK------QLSFIGCVSSNETYTKLIDRFPTIEKDWDLHVLPITASTKPSTQ 392
Query: 363 GMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQE 422
G++P+ SS + S P F +T+ RV + + +S C C + Y QE
Sbjct: 393 GVYPK-------SSLMGSFVPFGGFFSSTSNF---RVPLSSTVNQTLSRCHLCNEKYLQE 442
Query: 423 LAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQEL 482
+A + K SS + + + L P WL + + T D + Q + L
Sbjct: 443 VAAVLKA--GSSLSLADKCSEKLAP-WLRAIETKEDKGITGSSKALDDANTSASQ-TAAL 498
Query: 483 QKKWNDTCLNQHPNFHPSSLGHERIVP-VPLSMTGLY---NSNLLARQPFQPKVQLNRNL 538
QKKW++ C + H LG + + P P+ S L + P + + +
Sbjct: 499 QKKWDNICQSIHHTPAFPKLGFQSVSPQFPVQTEKSVRTPTSYLETPKLLNPPISKPKPM 558
Query: 539 GDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISS 598
D +++ R VS S V TD LG ++ KT E
Sbjct: 559 ED--------LTASVTNRTVSLPLSCVTTDFGLGVIYASKNQESKTTRE----------- 599
Query: 599 EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR 658
+P L+ S QK FK L + L KV WQ EA +A++ + CK + +R
Sbjct: 600 KPMLVTLNSSLEHTYQK-----DFKSLREILSRKVAWQTEAVNAISQIICGCKTDSTRRN 654
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTAL 718
A +WL +GPD+VGKKK+A LSE+ G I + +H + + RGKT +
Sbjct: 655 QASG---IWLALLGPDKVGKKKVAMTLSEVFFGGKVNYICVDFGAEHCSLDDKFRGKTVV 711
Query: 719 DKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
D + + R P SV+LLE++++A+ + + A+ G++ D +GR IS+ NVI ++T+
Sbjct: 712 DYVTGELSRKPHSVVLLENVEKAEFPDQMRLSEAVSTGKIRDLHGRVISMKNVIVVVTSG 771
Query: 779 WLPD-SLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTK----RRASWLDEEERSTKP 833
D + + + + E+++ L++ W+L++ + G TK +R L+ +R+ K
Sbjct: 772 IAKDNATDHVIKPVKFPEEQV--LSARSWKLQIKL-GDATKFGVNKRKYELETAQRAVKV 828
Query: 834 RKETGSGLSFDLNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLN 893
++ DLN N ++ + DHE E + +
Sbjct: 829 QRSY-----LDLNLPV----------NETEFSPDHEAE-----------DRDAWFDEFIE 862
Query: 894 SVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKL--------VGGV 945
VD + FKPVDF + +++ I F G +E+ E + ++ G
Sbjct: 863 KVDGKVTFKPVDFDELAKNIQEKIGSHFERCFGSETHLELDKEVILQILAASWSSLSSGE 922
Query: 946 WLGRTGLEDWTEKVLVPSLHQLKLRLPNN 974
GRT ++ W + VL S + K + +N
Sbjct: 923 EEGRTIVDQWMQTVLARSFAEAKQKYGSN 951
>gi|356551867|ref|XP_003544294.1| PREDICTED: chaperone protein ClpB-like [Glycine max]
Length = 1075
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 293/1101 (26%), Positives = 455/1101 (41%), Gaps = 212/1101 (19%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +S ++Q LT EAA L+ ++A A RR+H QTT LH + LLA PS LR AC ++
Sbjct: 1 MPTPVSVVRQCLTDEAARALDDAVAVARRRSHAQTTSLHAISALLALPSSALRDACGRAR 60
Query: 61 PNS-------------SHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALK 107
+ S LQ RALEL V+L+RLP+++ + +PP+SN+LMAA+K
Sbjct: 61 SGAGAGTSAARFSAAYSPRLQFRALELSVGVSLDRLPSSKSTSAGEEEPPVSNSLMAAIK 120
Query: 108 RAQAHQRRGCPE-----QQQQPLLA----VKVELEQLIISILDDPSVSRVMREASFSSPA 158
R+QA+QRR PE QQ Q A +KVEL+ ++SILDDP VSRV EA F S
Sbjct: 121 RSQANQRRH-PESFHMFQQSQQGTASTSFLKVELKHFVLSILDDPIVSRVFAEAGFRSCD 179
Query: 159 VKAT--------IEQSLNSS-----CSVSNSSP---IGLGFRPSSRNLYMNPRLQQAGGV 202
+K ++ N S C++ + P I +R NP L
Sbjct: 180 IKLALLQPPLPPVQHRFNWSPPVFLCNLDPAQPDENIRRIMEVLARKNKRNPLLMGVYAK 239
Query: 203 CGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETK 262
+ EMV EL V +I K + +LK+L E
Sbjct: 240 SALKGFVEMVRNGRGGSALGSELRVVRLEREIGEFVKKGGSGEEKFGVRLKELEQQCE-- 297
Query: 263 FGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGR 322
G+G GV++ G+++ + + V + L G +
Sbjct: 298 -GSGSGVVVSFGEIE----------------VFVGEDVDVDVVRFVVSGLTRLLEIRGEK 340
Query: 323 LWLIGTA-TCETYLRCQVYHPSMENDWDLQAVPIAAKTP-LSGMFPRLGSNGILSSSVES 380
+ L+G A T Y + P++ENDWDL + + + TP + G++ + SS + S
Sbjct: 341 VSLLGVAETSHAYSKFLGLFPNVENDWDLHLLTVTSATPSMEGLYSK-------SSLMGS 393
Query: 381 LSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSE 440
P F T P +DP+ S LQ ++ + + S K E
Sbjct: 394 FVPFGGFFSTPEIRSP------VDPSSSYSTSSHWLQKV------VNMDAHRGSDVAKKE 441
Query: 441 VARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH-----P 495
+ P+ QT ++ L K QKKW+D C H P
Sbjct: 442 LHHPV-------------------QTNEENTSL--NDKILGFQKKWSDICQRLHHTSSLP 480
Query: 496 NF------------------------------HPSSLGHERIVPVPLSMTGLYNSNLLAR 525
F H +I +P + ++ S L+
Sbjct: 481 QFDISQTRSQAPTVEVLRFGLAFKESSNKDPSHSEFQYSSQISCMPKELHSIFPSKQLSV 540
Query: 526 QPFQPKVQLNR------NLGDTLQLNSN--------MVSSQPAERAVSPLNSPVRTDLVL 571
V +N + +TLQ++ N M + + S +PV TDL L
Sbjct: 541 PLPSDTVCINTGTDHVPKVSETLQIHMNTPWVAPSLMANKSALDHRSSSFRTPVTTDLGL 600
Query: 572 GRSKVLESAP--------EKTHIEPVKDFLGCISSEPPQNKLHE-----SQNDQLQKPLD 618
G + ++ H++ + D + +N H L+ D
Sbjct: 601 GTLYTSTAQDPDTPKLQDQRKHLQHLSDSVSTDCDGMNENTSHRIARFSCSGSNLEGKFD 660
Query: 619 PDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGK 678
FK L + L EKV WQ +A A++ T++ CK G GKRRG+ + D+WL F+GPDR+GK
Sbjct: 661 LADFKSLDRLLTEKVGWQDQAICAISQTLSLCKSGAGKRRGSNGRADIWLAFLGPDRLGK 720
Query: 679 KKMASALSELVSGASPIMI-----------PLGPRRDHEEPEVR--VRGKTALDKIGEAV 725
+K+AS L+E + G +I PL ++++ +R KT LD I +
Sbjct: 721 RKIASVLAETIFGNPESLISVDLGFQDSFYPLNSVFEYQKSRCYDVLRRKTILDYIAGEL 780
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+ P SV+ LE++D+AD++V+ ++ +A+ G+ S+GR IS+ N IF++T+ +
Sbjct: 781 SKKPHSVVFLENVDKADVLVQNSLLQAVRTGKFSYSHGRVISINNTIFLVTSTVCKGNGS 840
Query: 786 F-LSQGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGLSFD 844
F L + E+++ + QL L + R S P K S +
Sbjct: 841 FVLEESKMFSEERILEAKRCQMQLLLGHASEDAGRIGS----TNVKVVPGKGFSKSSSLN 896
Query: 845 LNKAADVGDDKDG------------SHNSSDLTV-----------DHEEEHGFTNRLLMT 881
K AD+ D K+G S + DL + DHE E +T
Sbjct: 897 KRKQADISDSKEGATSKMQKQDSEASRSYLDLNMPVEDGEEGVNDDHESES-------IT 949
Query: 882 PSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKL 941
+T D + +D +VFK +F + +V I F G L +EI E + +
Sbjct: 950 ENTDAWLSDFFDQIDEKVVFKSFNFDELAEEVLKRIGMLFQRTFGSELQLEIDYEVITHI 1009
Query: 942 VGGVWLG--RTGLEDWTEKVL 960
+ WL + +EDW E VL
Sbjct: 1010 LAAAWLSDKKNAVEDWVEHVL 1030
>gi|449463567|ref|XP_004149505.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222907 [Cucumis sativus]
Length = 774
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 259/821 (31%), Positives = 389/821 (47%), Gaps = 143/821 (17%)
Query: 9 QQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLAS-PS--GYLRQACIKSHPNSSH 65
QQTLTPEAASVL HS++ A+RR H TPLHVA+TLL+S PS R+AC+KSHP H
Sbjct: 11 QQTLTPEAASVLKHSLSLAARRGHSHVTPLHVASTLLSSKPSTLSLFRRACLKSHP--PH 68
Query: 66 PLQCRALELCFSVALERLPTAQQNVSPGL--DPPISNALMAALKRAQAHQRRGCP----- 118
PLQ RALELCF+VAL RLPT+ SP L P +SNAL+AALKRAQAHQRRG
Sbjct: 69 PLQSRALELCFNVALNRLPTS----SPPLLHSPSLSNALIAALKRAQAHQRRGSSLDHQH 124
Query: 119 EQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS----LNSSCSVS 174
+QQQ PLL +KVEL+ L+ISILDDPSVSRVMREA FSS AVK IE+ + +S + +
Sbjct: 125 QQQQHPLLTIKVELQHLVISILDDPSVSRVMREAGFSSTAVKNNIEEYSSNIITTSTATT 184
Query: 175 NSSPIGLGFRPSSR-------------NLYMNPRLQQAGGVCGGQSEPEMVVRESLAKIE 221
++ L F P S +++ R ++ + G SE VV E + K +
Sbjct: 185 QTTTTPLFFFPGSGSSSGSENASKFVFEVFLGMRKRKNVVLVGDSSEG--VVLEVMRKFK 242
Query: 222 SKELDGVLKNVQIIRLDKDFTCDKAGIVSKL--KDLGALIETKFGNGDGVILDLGDLKWL 279
E+ +K V+ + + + VS+ + L + N GV++ +GDLKW+
Sbjct: 243 MGEVPEEMKGVKFVEF-VPYNNNNNSNVSEFLRRKLEENYDHTENNEGGVVVYVGDLKWI 301
Query: 280 VEQ-QVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGR----------LWLIGT 328
VE+ ++FGV +V EI +L+ R +W+ G
Sbjct: 302 VERGSCSNFGVDG-------------LVGEIERLLLEGFHYNDRNNLNIKKKIKIWVXGV 348
Query: 329 ATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAF 388
A+ + Y+RCQ+ PS+E WDL A+P+ P SG+ L S+ + S LS +
Sbjct: 349 ASYQIYMRCQMRLPSLETQWDLHALPL----PSSGLALALHSSSVYDS---RLSFFSQSM 401
Query: 389 QTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQ 448
+T + + +NL +CC +C N++ EL L K F LP
Sbjct: 402 ETKPFIIGKEEHQNL------TCCEECTSNFQNELLHL-KSFHSKQ-----------LPS 443
Query: 449 WLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSLGHERIV 508
WL + K++ EL++KWN C H + SL +
Sbjct: 444 WLQSPP---------------------KEELVELKRKWNKLCNTLHRDNSVQSL-----I 477
Query: 509 PVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTD 568
S + Y P+ PK ++ Q + + +S R S +
Sbjct: 478 GKSFSYSSSY--------PWWPKSNISFTDHHHHQTSKPLQTSNFVPR-FRRQQSCTTIE 528
Query: 569 LVLGRSKVLESAPEKTHIEPVKDFLG---CISSEPPQNKLHESQNDQLQKPLDPDSFK-R 624
G +K + + + +K+ G I+ + +S + ++ + S +
Sbjct: 529 FDFGNAKTKQEQSGELSLNSLKNMDGKEVKITLALGNSLFSDSSAESMEMESERKSERGE 588
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
+LK L E V W+ E +A V K K W+L G D +GK+KM
Sbjct: 589 ILKVLEENVPWRSELIPCIAEAVISMK--------KDDKLIQWVLMEGNDFIGKRKMGIV 640
Query: 685 LSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMV 744
++EL+ G+ ++ L + + G + + + +A+K N V+L+ED++ AD
Sbjct: 641 IAELLFGSVDFLLDLNAKSEE-------MGISKCEMLEKALKLNKELVVLVEDVEMADSQ 693
Query: 745 VRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+ ++ A G+ D +E ++ VIFILT D D +K
Sbjct: 694 LMKLLENAFHNGKFEDM--KEETVQKVIFILTKDNSSDKMK 732
>gi|357461271|ref|XP_003600917.1| Chaperone protein clpB [Medicago truncatula]
gi|355489965|gb|AES71168.1| Chaperone protein clpB [Medicago truncatula]
Length = 1081
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 313/1123 (27%), Positives = 503/1123 (44%), Gaps = 209/1123 (18%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYL-RQACIKS 59
M +S+ +Q LTPEA LN ++A A RR H QTT LH + LL+ PS + R AC +S
Sbjct: 1 MPTPVSSARQCLTPEAIQALNDAVAVAKRRGHAQTTSLHAISALLSLPSSSILRDACSRS 60
Query: 60 HPNSSHP-LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCP 118
++ P LQ +AL+LC SV+L+R P++ NVS +PP+SN+LMAA+KR+QA+QRR P
Sbjct: 61 RNSAYSPRLQFKALDLCLSVSLDRSPSSHNNVSSDHEPPVSNSLMAAIKRSQANQRRH-P 119
Query: 119 EQ-------------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ 165
+ Q + +VKVEL+ L++S+LDDP VSRV EA F S +K I +
Sbjct: 120 DNFHFYHQQQQLQSQQTFSVSSVKVELQHLVLSVLDDPVVSRVFAEAGFRSSEIKLAILR 179
Query: 166 SL----------------------------NSSCSVSNSSPIGLGFRPSS----RNLYMN 193
L +S + FR R+ N
Sbjct: 180 PLPHLFRRGPPVFLCNLPEQPRRGAGFGFGLGFPFLSGVGDVDENFRRIGEILVRSKGKN 239
Query: 194 PRLQQAGGVCGGQSEPEMVV--RESLAKIESKELDGVLKNVQIIRLDKDFTCDKAGIVS- 250
P L A G +S E V RE + +E LDG+ ++I + K+ +VS
Sbjct: 240 PLLLGACGNDALRSFTEAVEKRREGVLPLE---LDGL----RVICIGKELESGDCEVVSL 292
Query: 251 KLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIG 310
KLK + A++E G GVI+ G+LK V V E+G
Sbjct: 293 KLKQIAAIVEECVG--PGVIVSFGELKSFVNDD-------------------GGFVEELG 331
Query: 311 KLVARFGGGGGRLWLIGTA-TCETYLRCQVYHPSMENDWDLQAVPI-AAKTPLSGMFPRL 368
KL+ + WL G A + E+YL+ PS+E DWDLQ +PI + K S PR
Sbjct: 332 KLLKIHYD---KFWLAGAADSYESYLKFLGRFPSVEKDWDLQILPITSVKASESYQRPR- 387
Query: 369 GSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSK 428
SS ++S PL F + + D ++ C+ + Q K
Sbjct: 388 ------SSLMDSFVPLGGFFSSQS-----------DLRGPLNGSFGCVPHDNQFGEKCEH 430
Query: 429 EFEKSSSEVKSEVARP-----LLPQWLHNAK-----------AHDG--DDKTAEQTENKD 470
E +S+E + V+ P LPQWL + DG D + T +
Sbjct: 431 EVLGASNE-RFSVSAPDPYPSNLPQWLKTTEFGTTKTLTVKTKDDGVLGDSSESCTPRNN 489
Query: 471 QDLIWKQKSQELQKKWNDTCL-----------NQHPNFHPSSL----GHERI-----VPV 510
D I + Q + K +TC N+ + H S + E I PV
Sbjct: 490 LDNICQVLHQRIPKA--NTCHTVVGFHCADNKNEDADNHSSKIVDKSSKEYINLNSHAPV 547
Query: 511 PL-SMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQ-----------PAERAV 558
+ +M+ L +SN +V+ NL D Q ++ S +
Sbjct: 548 GVQTMSALQSSNSFPSFFLAKQVKNIPNLTDMFQNVKDLESGDLRSCNISSSSVSDGSQL 607
Query: 559 SPLN-SPVRTDLVLG-----RSKVLESAPEKTHIEPVKD----FLGCISSEPPQNKLHES 608
SP + + V TDL LG S L A + +EP K+ F + + ++ S
Sbjct: 608 SPTSVTSVTTDLGLGICSSPTSNKLTKAAVQYTMEPPKEIPNRFTSSFNLDEEIIRMRPS 667
Query: 609 QN------DQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGS 662
Q+ D Q+ D + K L ++L + V WQ EA A+ T+ + K G
Sbjct: 668 QSSSCLTFDYYQQADDARNPKVLFEALSKAVRWQDEAIRAIIKTIVCGSTKSAKDHGLNQ 727
Query: 663 KGDMWLLFMGPDRVGKKKMASALSELVSGA--SPIMIPLGPRRDHEEPEVRVRGKTALDK 720
+GD W+ F+GPDR GKKK+A +L+EL+ G+ + + L ++ V+ RGK+ LD
Sbjct: 728 RGDKWMNFVGPDRHGKKKIAVSLAELLYGSRENFTFVDLS-SKEMNGCNVKFRGKSHLDF 786
Query: 721 IGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWL 780
+ + + P SV+ +E++D+AD+V + ++ +A++ G++ DS+GRE+S N IF+ +
Sbjct: 787 LVDECCKKPLSVVFIENVDKADIVAQSSLSQAIKTGKITDSHGREVSANNAIFVFSFSGY 846
Query: 781 PDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSG 840
+SL + E+++ S+ G ++++ + + ++ + + P
Sbjct: 847 QNSLMQTREPSNYSEERMLSVRGGGIKIKVEHMVRDIRNQSIGVPNNSINIIP------N 900
Query: 841 LSFDLNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLL--------------------- 879
L+F +NK +GD++ H+ L + H +NRLL
Sbjct: 901 LNF-INKRKLIGDNE--LHDPHLLADAAKRAHTTSNRLLDLNLPAEENEQKQTDDGNFEH 957
Query: 880 -MTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEAL 938
T + + QDL N VD +VFKP DF + V + F+ I+G +++I E +
Sbjct: 958 VSTENQNLWLQDLYNQVDETVVFKPYDFDSLDDRVLKLVRNNFNKILGSECALQIQTEVM 1017
Query: 939 EKLVGGVWL--GRTGLEDWTEKVLVPSLHQLKLRLPNNATAAT 979
++L+ ++ T +E+W ++VL +++ R N TA++
Sbjct: 1018 DQLLAAAYVSDSDTEVENWVQQVLYGGFTEVRRRY--NLTASS 1058
>gi|356533866|ref|XP_003535479.1| PREDICTED: chaperone protein ClpB1-like [Glycine max]
Length = 835
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 195/527 (37%), Positives = 270/527 (51%), Gaps = 77/527 (14%)
Query: 1 MRAGLSTIQ-QTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKS 59
MR G+ +IQ Q LTPEA +V+ ++ A+RR H Q TPLHVA+ +LA+ +G LR+AC++
Sbjct: 1 MRGGICSIQLQALTPEATTVVKQAVNLATRRGHAQVTPLHVASAMLATSTGLLRKACLQC 60
Query: 60 HPNSSHPLQCRALELCFSVALERLPTAQQN--VSPGLDPP-ISNALMAALKRAQAHQRRG 116
H SHPLQC+ALELCF+VAL RLP + + ++P P +SNAL+AA KRAQAHQRRG
Sbjct: 61 H---SHPLQCKALELCFNVALNRLPASTSSPLLAPQYSTPSLSNALVAAFKRAQAHQRRG 117
Query: 117 CPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSS-CSVSN 175
E QQQ +LA+K+E+EQL+ISILDDPSVSRVMREA FSS VK +EQ+++ CS
Sbjct: 118 SIENQQQHILALKIEVEQLVISILDDPSVSRVMREAGFSSTLVKTRVEQAVSMEVCSQKA 177
Query: 176 SSPIGLGFRPSSRNLYMNPRLQQAGG------------------VCGGQSEPEMVVRESL 217
SS G +M P L V G + E V RE +
Sbjct: 178 SSDRIAG------GSFMKPNLDHVNNDDVTSVLSELVRRKNTVIVGEGVANAEGVAREVM 231
Query: 218 AKIESKELDGVLKNVQIIRLDKDFTC----DKAGIVSKLKDLGALIETKFGNGDGVILDL 273
+ E + G L+ VQ + L C K + KL ++ L+++ G GV+L L
Sbjct: 232 ERFEVGNVPGDLRYVQFVSL--PLMCFRNISKEEVEQKLMEIRNLVKSYVGR--GVVLYL 287
Query: 274 GDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCET 333
GDLKWL E F + + ++V E+ KLV G RLWL+G AT +
Sbjct: 288 GDLKWLFE-----FWANFCEQKRNYYCSIEQMVMELKKLVCG-SGESSRLWLMGIATFKA 341
Query: 334 YLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAA 393
Y++C++ HPS+E W+L I G LS S+ S ++ ++
Sbjct: 342 YMKCKICHPSLEAIWELHPFTIPV--------------GSLSLSLNFHSDFQAQERSKVF 387
Query: 394 ALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNA 453
+ ++CCR CL N+E+E ++ K S LP WL N
Sbjct: 388 FKDVAFEDRTGVRNHLTCCRDCLINFEKEAQSITNCISKKVCTASS------LPTWLQNC 441
Query: 454 KAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPS 500
K D +DQ+ + + L KKWN C + H HPS
Sbjct: 442 KEERSDIM-------EDQE---SSRLEYLCKKWNSLCNSIHRR-HPS 477
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 20/190 (10%)
Query: 609 QNDQLQKPLDPDSFKRLLKSLMEKVWWQQEA-ASAVATTVTQCKLGNGKR-----RGAGS 662
++ Q+ K + ++ K L +L +K+ ++ +A+TV C+ G KR
Sbjct: 579 ESTQMFKEPNAENHKILCDALEKKIPQHKDVIVPEIASTVLHCRSGMRKRGLNHLMNREE 638
Query: 663 KGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLG------PRRDHEEPEVRVRGK- 715
+ W+ F+G + K+ ++ L+++V G+ + +G P DH+ + + + K
Sbjct: 639 NQETWMFFLGVNSQAKESISRELAKVVFGSYSNFVSIGMSNFSSPEDDHDSTDEKSKRKR 698
Query: 716 -------TALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISL 768
+ + + GEAV NP V LED+D+ D + +K+A++ G + G + L
Sbjct: 699 PREELKSSYVQRFGEAVNENPHRVFFLEDLDQVDYFSQKGVKQAIQSGSITLPSGESVPL 758
Query: 769 GNVIFILTAD 778
+ I I + +
Sbjct: 759 KDAIVIFSCE 768
>gi|297822717|ref|XP_002879241.1| hypothetical protein ARALYDRAFT_481905 [Arabidopsis lyrata subsp.
lyrata]
gi|297325080|gb|EFH55500.1| hypothetical protein ARALYDRAFT_481905 [Arabidopsis lyrata subsp.
lyrata]
Length = 1007
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 294/1056 (27%), Positives = 471/1056 (44%), Gaps = 183/1056 (17%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M ++T +Q LT E A L+ +++ A RR+H QTT LH + LL PS LR+ CI
Sbjct: 1 MPTPVTTARQCLTEETARALDDAVSVARRRSHAQTTSLHAVSGLLTMPSSILREVCISRA 60
Query: 61 PNS---SHPLQCRALELCFSVALERLPTAQQNVSPGL-------DPPISNALMAALKRAQ 110
++ S LQ RALELC V+L+RLP+++ P DPP+SN+LMAA+KR+Q
Sbjct: 61 AHNTPYSSCLQFRALELCVGVSLDRLPSSKSPPPPTTTTTTVEEDPPVSNSLMAAIKRSQ 120
Query: 111 AHQRRGCPEQQQ-----------QPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAV 159
A QRR PE Q +KVEL+ I+SILDDP VSRV EA F S +
Sbjct: 121 ATQRRH-PETYHLHQIHGNNNNTQTTSVLKVELKYFILSILDDPIVSRVFGEAGFRSTDI 179
Query: 160 KATIEQSLNSS-----------------CSVSNSSP--IGLGF-------------RPSS 187
K + +S C++ S P + GF
Sbjct: 180 KLDVLHPPVTSQFSSRFSSRSRIPPLFLCNLPESDPGRVRFGFPLGDLDENCRRIGEVLG 239
Query: 188 RNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLD-KDFTCDKA 246
R NP L GVCGG++ +S+ + + L + + ++ ++ + D +
Sbjct: 240 RKDKKNPLLV---GVCGGEALKTFT--DSINRGKFGFLPLEISGLSVVSIEISEVLVDGS 294
Query: 247 GIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVV 306
I K DLG L G++L+LG+LK L V S V L+ +
Sbjct: 295 RIDIKFDDLGRL-------KSGMVLNLGELKVLT-SDVFSVSVVEKFVLK---------L 337
Query: 307 AEIGKLVARFGGGGGRLWLIGTATC-ETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMF 365
+++ KL + +LW IG+ + ETYL+ P ++ DW+L +PI + + G++
Sbjct: 338 SDLLKLHSE------KLWFIGSVSSNETYLKLIEKFPMIDKDWNLHLLPITSSS--QGVY 389
Query: 366 PRLGSNGILSSSVESLSPLKSAFQTTA-AALPRRVSENLDPARRMSCCRQCLQNYEQELA 424
P+ SS + S P F +T+ +P S N R C C + YEQE+
Sbjct: 390 PK-------SSLMGSFVPFGGFFSSTSDFRVPFSNSMNQSLPR----CHLCNEKYEQEVT 438
Query: 425 KLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQK 484
F KS S + + + L P WL N + H+ D + + KD + + LQK
Sbjct: 439 A----FAKSGSSLDDQCSEKL-PSWLRNVE-HEQDKGSLGKV--KDDPNVLVSRIPALQK 490
Query: 485 KWNDTC--LNQHPNFHPSSLGHERIVP-VPLSMTGLYNS-------------NLLARQPF 528
KW+D C ++Q P F L + + P PL + S ++ + F
Sbjct: 491 KWDDICQRIHQTPAF--PKLSFQPVRPQFPLQLVSSSQSKMSLGSSTEQSVRSIRTSESF 548
Query: 529 QPKVQLN---RNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTH 585
Q Q+ G +L+++ + R + S V TDL LG + ++ +
Sbjct: 549 QGTAQVQNPPHQPGLSLKISKPTHTEDLTSRTTNSPLSCVTTDLGLG---TIYASKNQDS 605
Query: 586 IEPV----KDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAAS 641
PV KDF + E Q+ L P FK L + L KV +Q EA +
Sbjct: 606 NTPVSLERKDF----------EVIKEKQS--LVAPRYCKDFKSLRELLSRKVGFQNEAVN 653
Query: 642 AVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGP 701
A++ V + + +R + ++WL +GPD+ GKKK+ASAL+++ I +
Sbjct: 654 AISEIVCGYRDESRRRNNIATTSNVWLALLGPDKAGKKKVASALADVFCSGQDNFICVD- 712
Query: 702 RRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDS 761
+ + + R RGKT +D I V SV+ +E++++A+ + + AM G+L DS
Sbjct: 713 FKSQDNLDDRFRGKTVVDYIASEVATRADSVVFIENVEKAEFPDQIRLSDAMRTGKLRDS 772
Query: 762 YGREISLGNVIFILT---ADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSI------ 812
+GREIS+ NVI + T +D D L + + E+++ L++ W+L++ +
Sbjct: 773 HGREISMKNVIVVATISGSDKDSDC-HVLEEPVKYSEERV--LSAKNWKLQIKLADTSNV 829
Query: 813 -RGKTTKRRASWLDEEERSTKPRKETGSGLSFDLNKAADVGDDKDGSHNSSDLTVDHEEE 871
+ KRR + E + K S L DLN D ++ E+
Sbjct: 830 NKNGLNKRRQEEAETEMTELRALKSQRSFL--DLNLPVD--------------EIEANED 873
Query: 872 HGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSI 931
+T M+ +T +D + VD + FK +DF + +++ I F G +
Sbjct: 874 EAYT----MSENTEAWLEDFVEQVDGKVTFKLIDFDELAKNIKRNIISLFHRSFGPETHL 929
Query: 932 EILDEALEKLVGGV-WLG--RTGLEDWTEKVLVPSL 964
EI ++A+ K++G + W + W + VL PS
Sbjct: 930 EIENDAILKILGALRWSSDEEKTFDQWLQNVLAPSF 965
>gi|224106239|ref|XP_002314097.1| predicted protein [Populus trichocarpa]
gi|222850505|gb|EEE88052.1| predicted protein [Populus trichocarpa]
Length = 1063
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 305/1076 (28%), Positives = 477/1076 (44%), Gaps = 189/1076 (17%)
Query: 9 QQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNS-SHPL 67
+Q LT EAA L+ ++A A RR+H QTT LH + LLA P+ L+ AC ++ ++ S
Sbjct: 9 RQCLTEEAARALDEAVAVARRRSHSQTTSLHAVSALLALPASTLKNACSRTTTSAYSSRR 68
Query: 68 QCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQ------- 120
Q L+LC V+L+RLP+++ + DPPISN+LMAA+KR+QA+QRR P+
Sbjct: 69 QFHVLDLCVGVSLDRLPSSK---TLEEDPPISNSLMAAIKRSQANQRRH-PDNFHMHQIH 124
Query: 121 -QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ--SLNSS------- 170
QQ +KVE++ I+SILDDP VSRV EA F S +K I + SS
Sbjct: 125 CNQQAASVLKVEMKHFILSILDDPIVSRVFGEAGFRSCDIKMAIVHPPVIQSSKFSRAGC 184
Query: 171 -----CSV--SNSS----PIGLGFRPSSRNLYMNP-------RLQQAGGVCGGQSEPEMV 212
C++ SNS+ P G F P S L + R+ +A G+ ++
Sbjct: 185 APVFLCNLPGSNSTVPGRPPGFSF-PFSSGLDDDVGDDDVCRRIGEALVRREGKGRNLLL 243
Query: 213 VRESLAKIESKELDGVLKN------------VQIIRLDKD---FTCDKAGIVSKLK---- 253
V + +D V K+ V +I ++ + F + G K++
Sbjct: 244 VGVYASNALKGFVDSVNKDNKGGVLPSEISGVSVISVEDEVIHFVSEGGGDKEKMRLKFD 303
Query: 254 DLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLV 313
+LG +E +G G+++++GDLK LV + V + L+ +V+ KL
Sbjct: 304 ELGQELER--CSGPGIVVNIGDLKVLVGENVC-------------RDALSYLVS---KLT 345
Query: 314 ARFGGGGGRLWLIGTA-TCETYLRCQVYHPSMENDWDLQAVPIAA-KTPLSGMFPRLGSN 371
G ++WL+G A + +TYL+ +E DWDL+ +PI + K+P+ G
Sbjct: 346 GLLEGFREKIWLVGAADSYDTYLKSVGRFSGVEKDWDLRILPITSYKSPIGGF------- 398
Query: 372 GILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFE 431
G SS + S P F T + S N R C C YEQ++A + K
Sbjct: 399 GTKSSLLGSFVPFGGFFSTPSDFKIPSNSINQSITR----CHLCNAKYEQDVAAILKMGP 454
Query: 432 KSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCL 491
S +E LP L A+ K + + KD K LQ +W+D C
Sbjct: 455 TISV---AEQCSENLPSSLQMAELD--TRKAVDMVKTKDDGTSLNAKILGLQNRWDDICQ 509
Query: 492 NQH-----PNFHPSSLGHERIVPVPLS-MTGLY-----------NSNLLARQPFQPKVQL 534
H F S + + +TG Y S LL P+ Q
Sbjct: 510 RLHHAQPFSKFDVSQATSQAAIAEGFQYLTGKYCAVSEVENVNHQSKLLEE---VPRCQQ 566
Query: 535 NRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHI-------- 586
L N S P +R S + V TDL LG L ++ + I
Sbjct: 567 EEKESPWLTPNPMANVSLPTDRTSSFSVTSVTTDLGLG---TLYASSTRELITTKLCDPR 623
Query: 587 EPVKDFLGCISSEPPQN------KLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAA 640
E + F G S E N + + +FK ++++L E+V WQ A
Sbjct: 624 EHQEHFSGSSSVEYDDNTSLQIAQSSSCSGPSSGGQFNLRNFKSVMRALSEQVGWQDRAT 683
Query: 641 SAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGA--SPIMIP 698
A++ V++CK G+G+ G+ SKGD+ F+GPDR+GKKK+ASAL+ ++ G+ S + +
Sbjct: 684 LAISEAVSRCKAGHGRHHGSNSKGDISFAFLGPDRIGKKKIASALAMVMFGSIQSFVSMD 743
Query: 699 LGPR------------RDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVR 746
LG ++ + E+ R T +D I + + P S+I LE++D+AD +V+
Sbjct: 744 LGSHGKVNSSNSMLESQELHDDELG-RSTTFVDYIASKLSKKPHSLIFLENVDKADPLVQ 802
Query: 747 GNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGEW 806
++ A+ G+ DS GRE+S + IF+ T+ + LS+ T+ + L + W
Sbjct: 803 NSLSYALRTGKFPDSRGREVSTNSTIFVATSTITVGNTNLLSERETIRFSEEMILRAKSW 862
Query: 807 QLRL---SIRGKTTKRRASW----LD------EEERSTKPRKETGSGL--SFDLN-KAAD 850
Q+++ + TK +S LD E+E + + K L DLN D
Sbjct: 863 QMQILVEHVAEAATKSISSGNKRKLDVTSDSMEQESTCESSKRAHKPLRSYLDLNLPVED 922
Query: 851 VGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLL----NSVDSAIVFKPVDF 906
G+ + S N SD S S SQ L + VD +VFKP DF
Sbjct: 923 TGECANCSDNDSD-------------------SISESSQAWLEYFSDQVDEKVVFKPFDF 963
Query: 907 GRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLG--RTGLEDWTEKVL 960
+ I+K+ + G + +EI E + +++ WL + + DW E+V+
Sbjct: 964 DSLAEKTMKEISKQCQRVFGSEVLLEIDHEVMVQILAASWLSEKKRAMGDWIEEVV 1019
>gi|147866119|emb|CAN78825.1| hypothetical protein VITISV_006557 [Vitis vinifera]
Length = 1088
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 302/1121 (26%), Positives = 491/1121 (43%), Gaps = 219/1121 (19%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +S +Q LT EAA L+ ++ A RR+H QTT LH + LLA PS LR AC ++
Sbjct: 1 MPTPVSIARQCLTDEAARALDDAVGVARRRSHAQTTSLHAISALLAFPSSTLRDACARAR 60
Query: 61 PNSSHP-LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
++ P LQ RALEL V+L+RLP+++ +PP+SN+LMAA+KR+QA QRR PE
Sbjct: 61 SSAYSPRLQFRALELSVGVSLDRLPSSKALE----EPPVSNSLMAAIKRSQASQRRH-PE 115
Query: 120 -----QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK-ATIEQSLNSS--- 170
QQ Q ++VEL+ I+SILDDP VSRV EA F S +K A I L+
Sbjct: 116 NFHLQQQNQTASFLRVELKHFILSILDDPIVSRVFGEAGFRSCDIKIAMIXPPLSPVSRF 175
Query: 171 ----------CSVSNSSPIGLGFRPS---------------------SRNLYMNPRLQQA 199
C++++S P F +R NP L
Sbjct: 176 PRTRCPPIFLCNLTDSDPARRTFSFPFAGVSGSGDGDENSRRIGEVLTRKTGKNPLLI-- 233
Query: 200 GGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFTC--------DKAGIVSK 251
GVC S+ + + + + L + + +I ++K+ + DK G+ K
Sbjct: 234 -GVC--SSDALRCFADCVERRKGDVLPAEIAGLNLICIEKEISEFVGRGGSEDKLGL--K 288
Query: 252 LKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGK 311
LK+LG + E +G G+ ++ G+LK LV + + VV+++
Sbjct: 289 LKELGHMAEQY--SGPGIAVNFGELKALVGDDAPG-------------EAASXVVSKLTS 333
Query: 312 LVARFGGGGGRLWLIGTA-TCETYLRCQVYHPSMENDWDLQAVPI-AAKTPLSGMFPRLG 369
L+ LWL+G++ + ETYL+ PS+E DWDL +PI ++++ + G R
Sbjct: 334 LLK----AHPNLWLMGSSGSYETYLKFLTQFPSIEEDWDLHLLPITSSRSSVEGFCSR-- 387
Query: 370 SNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARR-MSCCRQCLQNYEQELAKLSK 428
SS + S P F T P L+ + ++ C C + EQE++ + K
Sbjct: 388 -----SSLMGSFVPFAGFFST-----PTDFKNPLNSTNQSITLCHLCNEKCEQEVSAILK 437
Query: 429 EFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWND 488
S+ ++ LP WL A +K A+ + KD K +QKKW D
Sbjct: 438 ---GGSTISLADRYSGTLPSWL--LMAEPDTNKGADAVKAKDDGRALNDKVLGVQKKWYD 492
Query: 489 TCLN-QHPNFHPSSL--------GHERIVPVP-------------------LSMTGLYNS 520
C H +P S+ G E +P LS + N
Sbjct: 493 ICQRLHHAPPYPKSIFQPVPQVSGAECYGFIPDRRETSSKDSSPSESGSANLSPSTTMNL 552
Query: 521 NLLARQPFQ---PKVQLNRNLGDTLQLNSNMVSSQPAERAVSPLNSP------------- 564
++ Q P V + ++ +L ++ S+ E SP SP
Sbjct: 553 QKISPSKIQIPLPVVSESXSVNFQSKLAGSVSKSKQVETRSSPWFSPCPLPNLSLAPDRT 612
Query: 565 -------VRTDLVLGRSKVLESAPEKT-----HIEPVKDFLGCISSE----PPQNKLHES 608
V TDL LG S K H E + F G +S+E N
Sbjct: 613 SSSCITSVTTDLGLGTLYASNSQETKRLNLQGHKERMNYFSGSVSAEFDVVSVNNSSQIG 672
Query: 609 QNDQLQKP-----LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSK 663
Q+ P +D FK L ++L V Q G+ K
Sbjct: 673 QSPSCSVPDLGGQMDARDFKSLWRALATAVLEMQGV------------------HGSNLK 714
Query: 664 GDMWLLFMGPDRVGKKKMASALSELV--SGASPIMIPLGPRRDHEEPE------------ 709
GD+WL F+GPD+VGKK++A+AL+E++ S S + + LG + +
Sbjct: 715 GDIWLSFLGPDKVGKKRIAAALAEIMFRSSXSLVSVDLGYQHGSNQSNSIFDQHELNSCG 774
Query: 710 VRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLG 769
+ RGKT D I +++ P V+ LE+ID+AD++ + ++ +A+ G+ DS+GREIS+
Sbjct: 775 IEFRGKTITDYIAGELRKKPQXVVFLENIDKADLLXQTSLSQAIRTGKFPDSHGREISIN 834
Query: 770 NVIFILTADWLPDSLKFLS--QGITLDEKKLTSLASGEWQLRLSIRGKTTK-RRASWLD- 825
++IF+ TA + +S + + E+++ L + WQ+++ I T + R++ ++
Sbjct: 835 HMIFVTTATSKKGNRNLVSGKEPVEFSEERI--LGAKSWQMKILIGCVTGEASRSNGMNV 892
Query: 826 --------EEERSTKPRKETGSGLSFDLNKAADVGDDKDGSHNSS---DLTVDHEEEHGF 874
+ST RK +G + +K ++ + NS +L V+ EE
Sbjct: 893 LVTPREGTSNPKSTSKRKFIDTGSFAEQDKYLEMSKRACKASNSYLDLNLPVEELEEDVD 952
Query: 875 TNRLLMTPSTSTPS---QDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSI 931
+ + + ++ L+ +D + FKP +F + + + I+ F IIG + +
Sbjct: 953 SANCDSDSLSESSEAWLEEFLDQMDEKVTFKPFNFDAVAQKLLKEISLNFQKIIGSDIQL 1012
Query: 932 EILDEALEKLVGGVWLGRTG--LEDWTEKVLVPSLHQLKLR 970
EI E + +++ WL G ++DW E+VL S + + R
Sbjct: 1013 EIDSEVMVQILAAAWLSEKGGAVDDWVEQVLSKSFTEARQR 1053
>gi|18402202|ref|NP_565689.1| double Clp-N motif-containing P-loop nucleoside triphosphate
hydrolase domain-containing protein [Arabidopsis
thaliana]
gi|3420054|gb|AAC31855.1| expressed protein [Arabidopsis thaliana]
gi|330253235|gb|AEC08329.1| double Clp-N motif-containing P-loop nucleoside triphosphate
hydrolase domain-containing protein [Arabidopsis
thaliana]
Length = 1002
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 299/1053 (28%), Positives = 463/1053 (43%), Gaps = 182/1053 (17%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACI--- 57
M ++T +Q LT E A L+ +++ A RR+H QTT LH + LL PS LR+ CI
Sbjct: 1 MPTPVTTARQCLTEETARALDDAVSVARRRSHAQTTSLHAVSGLLTMPSSILREVCISRA 60
Query: 58 -KSHPNSSHPLQCRALELCFSVALERLPTAQQNVSPGL--DPPISNALMAALKRAQAHQR 114
+ P SS LQ RALELC V+L+RLP+++ + + DPP+SN+LMAA+KR+QA QR
Sbjct: 61 AHNTPYSSR-LQFRALELCVGVSLDRLPSSKSTPTTTVEEDPPVSNSLMAAIKRSQATQR 119
Query: 115 RGCPEQQQ----------QPLLAVKVELEQLIISILDDPSVSRVMREASFSS-------- 156
R PE + +KVEL+ I+SILDDP VSRV EA F S
Sbjct: 120 RH-PETYHLHQIHGNNNTETTSVLKVELKYFILSILDDPIVSRVFGEAGFRSTDIKLDVL 178
Query: 157 -PAVKATIEQSLNSSCSV----------SNSSPIGLGF-------------RPSSRNLYM 192
P V + S + S+S + GF +R
Sbjct: 179 HPPVTSQFSSRFTSRSRIPPLFLCNLPESDSGRVRFGFPFGDLDENCRRIGEVLARKDKK 238
Query: 193 NPRLQQAGGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFTCDKAGIVSKL 252
NP L GVCG ++ + K L+ +V I++ + D + I K
Sbjct: 239 NPLLV---GVCGVEALKTFTDSINRGKFGFLPLEISGLSVVSIKI-SEVLVDGSRIDIKF 294
Query: 253 KDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKL 312
DLG L G++L+LG+LK L V S V L+ +A++ KL
Sbjct: 295 DDLGRL-------KSGMVLNLGELKVLA-SDVFSVDVIEKFVLK---------LADLLKL 337
Query: 313 VARFGGGGGRLWLIGTATC-ETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSN 371
+LW IG+ + ETYL+ P+++ DW+L +PI + + G++P+
Sbjct: 338 ------HREKLWFIGSVSSNETYLKLIERFPTIDKDWNLHLLPITSSS--QGLYPK---- 385
Query: 372 GILSSSVESLSPLKSAFQTTA-AALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEF 430
SS + S P F +T+ +P S N R C C + YEQE+ F
Sbjct: 386 ---SSLMGSFVPFGGFFSSTSDFRIPSSSSMNQTLPR----CHLCNEKYEQEVTA----F 434
Query: 431 EKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTC 490
KS S + + + L P WL N + H+ + + KD + + LQKKW+D C
Sbjct: 435 AKSGSMIDDQCSEKL-PSWLRNVE-HEHEKGNLGKV--KDDPNVLASRIPALQKKWDDIC 490
Query: 491 --LNQHPNFHPSSLGHERIVP-VPLSMTGLYNSNLLARQP------------FQPKVQLN 535
++Q P F L + + P PL + + + P FQ V L
Sbjct: 491 QRIHQTPAF--PKLSFQPVRPQFPLQLGSSSQTKMSLGSPTEKIVCTRTSESFQGMVALP 548
Query: 536 RNLGDTLQLNSNMVSSQPAER-AVSPLNSP---VRTDLVLGRSKVLESAPEKTHIEPV-- 589
+N L+ + + E + S NSP V TDL LG + ++ + PV
Sbjct: 549 QNPPHQPGLSVKISKPKHTEDLSSSTTNSPLSFVTTDLGLG---TIYASKNQEPSTPVSV 605
Query: 590 --KDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTV 647
+DF + E Q L FK L + L KV +Q EA +A++ V
Sbjct: 606 ERRDF----------EVIKEKQ--LLSASRYCKDFKSLRELLSRKVGFQNEAVNAISEIV 653
Query: 648 TQCKLGNGKRR---GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRD 704
C + RR + ++WL +GPD+ GKKK+A AL+E+ G I + +
Sbjct: 654 --CGYRDESRRRNNHVATTSNVWLALLGPDKAGKKKVALALAEVFCGGQDNFICVD-FKS 710
Query: 705 HEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGR 764
+ + R RGKT +D I V R SV+ +E++++A+ + + AM G+L DS+GR
Sbjct: 711 QDSLDDRFRGKTVVDYIAGEVARRADSVVFIENVEKAEFPDQIRLSEAMRTGKLRDSHGR 770
Query: 765 EISLGNVIFILT---ADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSI-------RG 814
EIS+ NVI + T +D D L + + E+++ L + W L++ + +
Sbjct: 771 EISMKNVIVVATISGSDKASDC-HVLEEPVKYSEERV--LNAKNWTLQIKLADTSNVNKN 827
Query: 815 KTTKRRASWLDEEERSTKPRKETGSGLSFDLNKAADVGDDKDGSHNSSDLTVDHEEEHGF 874
KRR + E + K S L DLN D ++ E+ +
Sbjct: 828 GPNKRRQEEAETEVTELRALKSQRSFL--DLNLPVD--------------EIEANEDEAY 871
Query: 875 TNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEIL 934
T M+ +T +D + VD + FK +DF + +++ I F G +EI
Sbjct: 872 T----MSENTEAWLEDFVEQVDGKVTFKLIDFDELAKNIKRNILSLFHLSFGPETHLEIE 927
Query: 935 DEALEKLVGGV-WLG--RTGLEDWTEKVLVPSL 964
++ + K++ + W + W + VL PS
Sbjct: 928 NDVILKILAALRWSSDEEKTFDQWLQTVLAPSF 960
>gi|14532596|gb|AAK64026.1| unknown protein [Arabidopsis thaliana]
Length = 1002
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 299/1053 (28%), Positives = 463/1053 (43%), Gaps = 182/1053 (17%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACI--- 57
M ++T +Q LT E A L+ +++ A RR+H QTT LH + LL PS LR+ CI
Sbjct: 1 MPTPVTTARQCLTEETARALDDAVSVARRRSHAQTTSLHAVSGLLTMPSSILREVCISRA 60
Query: 58 -KSHPNSSHPLQCRALELCFSVALERLPTAQQNVSPGL--DPPISNALMAALKRAQAHQR 114
+ P SS LQ RALELC V+L+RLP+++ + + DPP+SN+LMAA+KR+QA QR
Sbjct: 61 AHNTPYSSR-LQFRALELCVGVSLDRLPSSKSTPTTTVEEDPPVSNSLMAAIKRSQATQR 119
Query: 115 RGCPEQQQ----------QPLLAVKVELEQLIISILDDPSVSRVMREASFSS-------- 156
R PE + +KVEL+ I+SILDDP VSRV EA F S
Sbjct: 120 RH-PETYHLHQIHGNNNTETTSVLKVELKYFILSILDDPIVSRVFGEAGFRSTDIKLDVL 178
Query: 157 -PAVKATIEQSLNSSCSV----------SNSSPIGLGF-------------RPSSRNLYM 192
P V + S + S+S + GF +R
Sbjct: 179 HPPVTSQFSSRFTSRSRIPPLFLCNLPESDSGRVRFGFPFGDLDENCRRIGEVLARKDKK 238
Query: 193 NPRLQQAGGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFTCDKAGIVSKL 252
NP L GVCG ++ + K L+ +V I++ + D + I K
Sbjct: 239 NPLLV---GVCGVEALKTFTDSINRGKFGFLPLEISGLSVVSIKIS-EVLVDGSRIDIKF 294
Query: 253 KDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKL 312
DLG L G++L+LG+LK L V S V L+ +A++ KL
Sbjct: 295 DDLGRL-------KSGMVLNLGELKVLA-SDVFSVDVIEKFVLK---------LADLLKL 337
Query: 313 VARFGGGGGRLWLIGTATC-ETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSN 371
+LW IG+ + ETYL+ P+++ DW+L +PI + + G++P+
Sbjct: 338 ------HREKLWFIGSVSSNETYLKLIERFPTIDKDWNLHLLPITSSS--QGLYPK---- 385
Query: 372 GILSSSVESLSPLKSAFQTTA-AALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEF 430
SS + S P F +T+ +P S N R C C + YEQE+ F
Sbjct: 386 ---SSLMGSFVPFGGFFSSTSDFRIPSSSSMNQTLPR----CHLCNEKYEQEVTA----F 434
Query: 431 EKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTC 490
KS S + + + L P WL N + H+ + + KD + + LQKKW+D C
Sbjct: 435 AKSGSMIDDQCSEKL-PSWLRNVE-HEHEKGNLGKV--KDDPNVLASRIPALQKKWDDIC 490
Query: 491 --LNQHPNFHPSSLGHERIVP-VPLSMTGLYNSNLLARQP------------FQPKVQLN 535
++Q P F L + + P PL + + + P FQ V L
Sbjct: 491 QRIHQTPAF--PKLSFQPVRPQFPLQLGSSSQTKMSLGSPTEKIVCTRTSESFQGMVALP 548
Query: 536 RNLGDTLQLNSNMVSSQPAER-AVSPLNSP---VRTDLVLGRSKVLESAPEKTHIEPV-- 589
+N L+ + + E + S NSP V TDL LG + ++ + PV
Sbjct: 549 QNPPHQPGLSVKISKPKHTEDLSSSTTNSPLSFVTTDLGLG---TIYASKNQEPSTPVSV 605
Query: 590 --KDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTV 647
+DF + E Q L FK L + L KV +Q EA +A++ V
Sbjct: 606 ERRDF----------EVIKEKQ--LLSASRYCKDFKSLRELLSRKVGFQNEAVNAISEIV 653
Query: 648 TQCKLGNGKRR---GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRD 704
C + RR + ++WL +GPD+ GKKK+A AL+E+ G I + +
Sbjct: 654 --CGYRDESRRRNNHVATTSNVWLALLGPDKAGKKKVALALAEVFCGGQDNFICVD-FKS 710
Query: 705 HEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGR 764
+ + R RGKT +D I V R SV+ +E++++A+ + + AM G+L DS+GR
Sbjct: 711 QDSLDDRFRGKTVVDYIAGEVARRAGSVVFIENVEKAEFPDQIRLSEAMRTGKLRDSHGR 770
Query: 765 EISLGNVIFILT---ADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSI-------RG 814
EIS+ NVI + T +D D L + + E+++ L + W L++ + +
Sbjct: 771 EISMKNVIVVATISGSDKASDC-HVLEEPVKYSEERV--LNAKNWTLQIKLADTSNVNKN 827
Query: 815 KTTKRRASWLDEEERSTKPRKETGSGLSFDLNKAADVGDDKDGSHNSSDLTVDHEEEHGF 874
KRR + E + K S L DLN D ++ E+ +
Sbjct: 828 GPNKRRQEEAETEVTELRALKSQRSFL--DLNLPVD--------------EIEANEDEAY 871
Query: 875 TNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEIL 934
T M+ +T +D + VD + FK +DF + +++ I F G +EI
Sbjct: 872 T----MSENTEAWLEDFVEQVDGKVTFKLIDFDELAKNIKRNILSLFHLSFGPETHLEIE 927
Query: 935 DEALEKLVGGV-WLG--RTGLEDWTEKVLVPSL 964
++ + K++ + W + W + VL PS
Sbjct: 928 NDVILKILAALRWSSDEEKTFDQWLQTVLAPSF 960
>gi|147827418|emb|CAN62072.1| hypothetical protein VITISV_031746 [Vitis vinifera]
Length = 861
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 281/547 (51%), Gaps = 90/547 (16%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG+ ++QQ LT +AAS + ++ A RR H Q TPLHVA+ +LAS SG LR AC++SH
Sbjct: 1 MRAGVCSVQQVLTADAASXVKQAVTLARRRGHAQVTPLHVASVMLASSSGLLRSACLRSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGL-----DPPISNALMAALKRAQAHQRR 115
SHPLQC+ALELCF+VAL RLP + SP L P +SNAL+AA KRAQAHQRR
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASSS--SPLLAPHSSHPSLSNALVAAFKRAQAHQRR 115
Query: 116 GCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN-SSCSV- 173
E QQQP+LA+KVE+EQLIISIL DPSVSRVMREA FSS ++ IEQ+++ CS
Sbjct: 116 ASIENQQQPILALKVEIEQLIISILHDPSVSRVMREAGFSSTQLRTNIEQAVSLDVCSQS 175
Query: 174 ---------SNSSPIGLGFRPSSRNLYM-------NP-------------------RLQQ 198
SN+ P+ LG S + ++ NP R +
Sbjct: 176 PAVSSLSKESNNPPLILGTNVSQSSTFIQFGVTLNNPFDEAQEEDVKSLLDAFTSKRRRN 235
Query: 199 AGGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLD----KDFTCDKAGIVSKLKD 254
V + E VVR + K E ++ G L+ VQ I L K+ + + + KL
Sbjct: 236 TVVVGETLASAEGVVRGLMNKFERGDVPGDLRYVQFISLPLFSLKNLSKE---VEQKLVK 292
Query: 255 LGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVA 314
L L+++ GV+L LGDLKW+ E + N G + + ++ E+G+++
Sbjct: 293 LNCLLKSYVCR--GVVLYLGDLKWVSEFE------SNYGERRNYCSPVEHIIMELGRMMC 344
Query: 315 RFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGIL 374
G GR+WL+GTAT +TY+RC+ HPS+E W+L + I + G+ L SN
Sbjct: 345 GI-GDRGRMWLLGTATFQTYMRCKAGHPSLETIWELHPLTIPVGS--LGLGLNLDSN--- 398
Query: 375 SSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEK-S 433
L+ FQ+ A+ S + ++C C N+++E ++ F
Sbjct: 399 ---------LQGRFQSKASGDGTSWSLLQSGDKHLTCSTNCSDNFDKESQSIACSFRNGE 449
Query: 434 SSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQ 493
S+ + LP WL K D DQ+ + + ++L KWN C +
Sbjct: 450 STTTITTSTSSSLPSWLQKEKRRKIMD---------DQECV---QVRDLCNKWNSFCSSV 497
Query: 494 HPNFHPS 500
H H +
Sbjct: 498 HKKAHST 504
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCK----LGNGKRRGAGSKGDMWLLF 670
K L+ ++ + L +L +V WQ++ +A+T+ +C+ G K + K + WLLF
Sbjct: 607 KELNAENLRILCNALERRVPWQKDIIPEIASTILECRSGTLRGKNKLKQREDKEETWLLF 666
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLG------PRRDHEEPEVRVRGK-----TALD 719
+G D GK+K+A +++LV G+ I +G R D E + + + + ++
Sbjct: 667 LGVDFQGKEKIAREIAKLVFGSXSKFISIGLSSLGSTRADSTEDFLSKQARDEPVGSYIE 726
Query: 720 KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
K EAV NP V +ED+++ D + +KR +E GR+ + G SL + I I + +
Sbjct: 727 KFAEAVHENPHRVFFIEDVEQLDYSSQMGVKRGIESGRIQIAGGEAFSLEDAIIIFSCE 785
>gi|224091901|ref|XP_002309392.1| predicted protein [Populus trichocarpa]
gi|222855368|gb|EEE92915.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 279/547 (51%), Gaps = 91/547 (16%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQ LT +AASV+ ++ A RR H Q TPLHVA T+L++ +G R AC++SH
Sbjct: 1 MRAGGCTVQQALTADAASVIKQAVTLARRRGHAQVTPLHVANTMLSASTGLFRTACLQSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD----PPISNALMAALKRAQAHQRRG 116
SHPLQC+ALELCF+VAL RLP + + G P ISNAL+AA KRAQAHQRRG
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASTSSPILGTHSQQFPSISNALVAAFKRAQAHQRRG 117
Query: 117 CPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN-SSCSVSN 175
E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VK+ +EQ+++ CS S
Sbjct: 118 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSA 177
Query: 176 SSPIGLGFRPSSRNLYMNPRLQQAGG-------------------VCGGQSEPEMVVRES 216
S + L +P Q G + + ++V ES
Sbjct: 178 PSVSSKSKESNGLVLSQSPTSSQVGAKATVLDPIKNEDVMCVIENLVNKRRRSFVIVGES 237
Query: 217 LAKIESKELDGVLKNVQ------IIRLDKDFTC--------DKAGIVSKLKDLGALIETK 262
LA IE + GV+ VQ +R K T + + KL++L I +
Sbjct: 238 LASIEVV-VKGVIDKVQKGDVPEALREVKFLTIPVSSFGHFSRVEVEHKLEELK--IHVR 294
Query: 263 FGNGDGVILDLGDLKWLVEQQVTS--------FGVPNSGTLQQQQQVLAEVVAEIGKLVA 314
G GV+L+LGDLKW +E + +S F P + ++ E+GKL
Sbjct: 295 SYMGKGVVLNLGDLKWAIENRASSSSSEQGRCFFCP-----------MEYMIIELGKLAC 343
Query: 315 RFGGG-GGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGI 373
G GR WL+G AT +TY++C+ HPS L + I A + L + I
Sbjct: 344 GIGENINGRFWLMGIATFQTYMKCKSGHPSGGTVLGLHPLTIPAGS--------LRLSLI 395
Query: 374 LSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKS 433
S + S A +++ + E+ ++++CC C +E E ++ F S
Sbjct: 396 SDSDLRCQSTRNKAGNGSSSWILHEGGED----KQLTCCADCSAKFESE----ARSFPTS 447
Query: 434 SSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQ 493
+ + S + LP WL K ++K + ++N++ I ++L +KWN C +
Sbjct: 448 TCDSDSTTSG--LPAWLQQCK----NEKNLQNSDNQNSMSI-----KDLCRKWNSFCSSI 496
Query: 494 HPNFHPS 500
H + S
Sbjct: 497 HRQHYFS 503
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 15/179 (8%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG----NGKRRGAGSKGDMWLLF 670
K L+ ++ K L +L +KV WQ++ +A+T+ QC+ G GK + + SK + WL F
Sbjct: 584 KELNAENLKILSIALEKKVPWQRDIIPEIASTILQCRSGMIRRKGKMKNSESKEETWLFF 643
Query: 671 MGPDRVGKKKMASALSELVSGAS------PIMIPLGPRRDHEEPEVRVRGK-----TALD 719
G D K+K+A L+ LV G++ + R D E R + + ++
Sbjct: 644 QGVDVEAKEKIAKELARLVFGSNDSFISVSLSSFSSTRADSTEDCRNKRSRDEQSCSYIE 703
Query: 720 KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ EA NP V L+ED+++AD + KRA+E GR+ +S G+E+ L + I IL+ +
Sbjct: 704 RFSEAASNNPRRVFLVEDVEQADYCSQIGFKRAIESGRITNSNGQEVGLSDAIIILSCE 762
>gi|356533304|ref|XP_003535205.1| PREDICTED: uncharacterized protein LOC100811773 [Glycine max]
Length = 836
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 277/523 (52%), Gaps = 75/523 (14%)
Query: 1 MRAGLSTIQ-QTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKS 59
MRAG+ +IQ Q LT EAA+++ ++ A+RR H Q TPLH+A +LA+ +G LR+AC++
Sbjct: 1 MRAGVCSIQLQALTSEAATLVKQAVTLATRRGHAQVTPLHIATVMLATSTGLLRKACLQC 60
Query: 60 HPNSSHPLQCRALELCFSVALERLPTAQQN---VSPGLD-----PPISNALMAALKRAQA 111
H SHPLQ +ALELCF+V+L RLP + N +SP + P +SNAL+AA KRAQA
Sbjct: 61 H---SHPLQYKALELCFNVSLNRLPASTPNPLLISPPYNSTTTTPSLSNALVAAFKRAQA 117
Query: 112 HQRRGCPEQ-QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN-- 168
HQRRG +Q QQQP+L +K+++EQLI+SILDDPS+SRVMREA FSS VK +EQ+++
Sbjct: 118 HQRRGSIDQNQQQPILTLKIKVEQLIVSILDDPSISRVMREAGFSSSLVKTRVEQAVSME 177
Query: 169 ------SSCSVSNSSPIG-LGFRPSSRNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKIE 221
+ S N++ + LG +S + + + V + PE +VR + +E
Sbjct: 178 LVCSQQQAYSKENTTELQVLGDDVTSVLSELVSKRRNTVIVGESLASPEGIVRGLIENLE 237
Query: 222 SKELDGVLKNVQIIRLD-KDF-TCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWL 279
+ G L+ VQ + L F K + KL +L L+++ G G IL LGDLKWL
Sbjct: 238 RGSVQGELRFVQFVSLPLVSFRNIGKKEVERKLVELRNLVKSHVGR--GFILYLGDLKWL 295
Query: 280 VE------QQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCET 333
E +Q T++ + +V E+ KL++ G GRLWL+G AT T
Sbjct: 296 FEFWSSYCEQRTNYYCS-----------VVHIVMELKKLISG-NGENGRLWLMGIATFGT 343
Query: 334 YLRCQVYHPSMENDWDLQ--AVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTT 391
Y++ Q HPS+E WDL VP+ LS + RLG S + K F+
Sbjct: 344 YMKGQACHPSLETIWDLHLFTVPVL----LSSL--RLGLT--FDSDFQVQERSKVTFKDE 395
Query: 392 AAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLH 451
+ E + ++CCR N+E+E + S + + LP WL
Sbjct: 396 S------FEERAKVRKYLTCCRDFSLNFEKEAKSTTNSITISKRDCTTN-----LPTWLQ 444
Query: 452 NAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH 494
N K + + E EN K +++ KKWN C + H
Sbjct: 445 NCK--EERSRIMENQENA--------KLRDICKKWNSFCSSAH 477
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 15/180 (8%)
Query: 612 QLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAG------SKGD 665
Q+ K + ++ K L +L++KV Q+E +A+TV C+ +G R G + +
Sbjct: 584 QIFKEHNDENLKILCDALLKKVSQQKEIVKEIASTVLLCR--SGMREGVNHLVKRDDRQE 641
Query: 666 MWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRR---DHEEPE-VRVR---GKTAL 718
+W F+G D K+ ++ L+++V G+ + +G HEE + R R G + L
Sbjct: 642 IWFFFLGLDSQAKEMVSKELAKVVFGSYSNFVSIGISSFSSTHEESKNKRPRDEFGGSYL 701
Query: 719 DKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ GEA+ NP V LED+++ D + +K+ +E G + G + L + I I +++
Sbjct: 702 QRFGEALNENPHRVFFLEDLEQVDHFSKKGVKKGIESGTITLPGGESVPLKDAIVIFSSE 761
>gi|224113403|ref|XP_002316485.1| predicted protein [Populus trichocarpa]
gi|222865525|gb|EEF02656.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 172/401 (42%), Positives = 230/401 (57%), Gaps = 62/401 (15%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG+ ++QQ LTPEA S++ ++ A RR H Q TPLHVA+T+LAS +G LR+AC++SH
Sbjct: 1 MRAGICSVQQALTPEAVSLVKQAVGLARRRGHAQVTPLHVASTMLASSTGLLRRACLQSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD---PPISNALMAALKRAQAHQRRGC 117
SHPLQC+ALELCF+VAL RLP + + G P +SNAL+AA KRAQAHQRRG
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASTSSALLGPHSSYPSLSNALVAAFKRAQAHQRRGS 117
Query: 118 PEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ----------SL 167
E QQQP+LA+K+E+EQLIISILDDPSVSRVM+EA FSS VK +EQ SL
Sbjct: 118 IENQQQPILALKIEIEQLIISILDDPSVSRVMKEAGFSSTQVKNKVEQTVSLEICPQSSL 177
Query: 168 NSSC-------------SVSNSSPIG-LGFRPSS-----RN---------LYMNPRLQQA 199
SC SVS S P G S RN L R
Sbjct: 178 TVSCQPKEIIKPQVLSASVSQSLPFSQFGIIHSKPLDQVRNDDVMSVLNTLVGKKRNTII 237
Query: 200 GGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQI--IRLDKDFTCDKAGIVSKLKDLGA 257
G C +E VVR + K E E+ G L++V+ + L + K + KL +L
Sbjct: 238 TGECLATAES--VVRGVMDKFERGEVSGDLRSVRFKNLPLFSFRSLSKEDLEQKLMELRC 295
Query: 258 LIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLA---EVVAEIGKLVA 314
++++ GV+L LGDLKW+ + +S+G +Q++ ++ E+ +LV
Sbjct: 296 IVKSYIST--GVVLYLGDLKWIADFW-SSYG-------EQRRSYYCTADHIILELKRLVH 345
Query: 315 RFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPI 355
F GRLWL+G AT +TY++C+ HPS+E W+L V I
Sbjct: 346 GF-SETGRLWLMGIATFQTYMKCKAGHPSLETMWELNPVTI 385
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGA----GSKGDMWLLF 670
K + S K L L +KV WQ++ +ATT+ +C+ G KR+G K + WL F
Sbjct: 600 KEFNDYSLKNLRSGLEKKVPWQKDIIPEIATTILECRSGMRKRKGKLNHIEDKAETWLFF 659
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLG------PRRD--HEEPEVRVR---GKTALD 719
+G D GK+K+A L++LV G+ + +G R D E R R G + L+
Sbjct: 660 LGVDFEGKEKIARELAKLVFGSQSNFVSIGLSNFSSSRADSIEESKNKRARDELGCSYLE 719
Query: 720 KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++G A+ NP V +ED+D+ D + IK+A+E G + G ++ L + I I + +
Sbjct: 720 RLGLALNENPHRVFFMEDVDQVDNCSQKGIKQAIENGNVTLPDGEKVPLKDAIIIFSCE 778
>gi|326513004|dbj|BAK03409.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1134
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 320/1170 (27%), Positives = 503/1170 (42%), Gaps = 213/1170 (18%)
Query: 9 QQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSG-YLRQACIKSHPNSSHP- 66
+Q L+P A + L+ ++ A RR H QTT LH+ A LLA + LR A ++ + P
Sbjct: 9 RQCLSPAAVTALDAAVVSARRRVHAQTTSLHLVAALLAQQAPPLLRDALARARSAAYSPR 68
Query: 67 LQCRALELCFSVALERLPTAQQNVSPGL--------DPPISNALMAALKRAQAHQRRGCP 118
+Q +ALELCF+V+L+RLP+A + +PP+SN+LMAA+KR+QA+QRR P
Sbjct: 69 VQLKALELCFAVSLDRLPSASSASASTSASGADEQPEPPVSNSLMAAIKRSQANQRRN-P 127
Query: 119 E----------QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS-- 166
+ Q V+VEL QL+++ILDDP VSRV +A F S +K I +
Sbjct: 128 DTFHFYHQAAFQAATAASQVRVELSQLLLAILDDPVVSRVFDDAGFRSADIKLAILRPAP 187
Query: 167 ----LNSSCSVSNSSPIGL-GFRPSSRNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKIE 221
L + + P+ L F +P AG G E + E LA+
Sbjct: 188 PMPLLGRLPTRARPPPLFLCSFAAGDDADVPSP----AGSAAGAGEENGRRIAEILARGR 243
Query: 222 SKELDGV--LKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWL 279
+ L GV + G S + ++ G+++ +GDL+ L
Sbjct: 244 NPMLVGVGAASAAADFAAASPYRVLPVGPNSIDQTQLSVAAAMASATSGLVISVGDLREL 303
Query: 280 VEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIG-TATCETYLRCQ 338
V P+ G LQ++ + VVAE+ +++ G R+W++G +AT ETYL
Sbjct: 304 V---------PDDGELQERGR---RVVAEVTRVLETHREG--RVWVMGWSATYETYLTFL 349
Query: 339 VYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSS---VESLSPLKSAFQTTAAAL 395
P ++ DW+LQ +PI A G+ P + LS S VES SP T +
Sbjct: 350 SKFPLVDKDWELQLLPITA-VRAGGLMPPATTPPALSKSASLVESFSPFGGLVNNTYDS- 407
Query: 396 PRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKA 455
S + P + C+QC EQE+ + K S + ++ LP L N
Sbjct: 408 ---NSLAVHPGPQTLRCQQCNDRCEQEVTTIVK-----GSGITADQGG--LPSLLQNGSM 457
Query: 456 HDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH--------------PNFHPSS 501
G + + + +D ++ K K LQKKWN+ CL H PN+
Sbjct: 458 M-GLNNGLDVIKVRDDQMVLKSKILNLQKKWNEYCLRLHQGSQRINTGPYQLFPNYAAVP 516
Query: 502 LGHER-----------------IVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQL 544
+ ER I P +S T + + P P + RN G L L
Sbjct: 517 VDTERATILSKGSESVTLQRDVIRPSAVSATQTNATPKKSVSP--PSISNQRNEGLVLNL 574
Query: 545 NS-------------------NMVSSQPAERAVSP-LNSPVRTDLVLGRS---------- 574
++ S E +SP + V TDLVL
Sbjct: 575 QGRHSKGDEQFQDRHAQLRQEHLSSCHDREDHMSPSAAASVATDLVLSTPRGSSSKGTSS 634
Query: 575 ---KVLESAPEKTHIEPVKDFLGCISSEPPQ-------------------NKLHESQNDQ 612
K A + TH+ P K + ++ EPPQ + LH +
Sbjct: 635 VSWKHAVDAEKSTHLTPNK--VDDLNMEPPQPFAQPYSSRSSTNMGQTSPSALHSPASGG 692
Query: 613 L-------QKPL-------DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR 658
+ QKP D +K L++ L + V Q+EA SA+ ++ C+ +RR
Sbjct: 693 VSAFGQWRQKPSQLAAQGSDLSDYKLLVERLFKVVGRQEEALSAICGSIVGCQ-STERRR 751
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTAL 718
GA K D+W F G D V K+++A AL+ELV G+ I L + RGKT +
Sbjct: 752 GASRKNDIWFSFHGFDSVAKRRVAVALAELVHGSQDSFIHLDLSL-QDWGGSSFRGKTGI 810
Query: 719 DKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT-- 776
D I E + + VI L++ID+AD +V+ ++ A++ GR D G+E+++ + I IL+
Sbjct: 811 DCIVEELSKKRRCVIFLDNIDKADCLVQDSLSHAVDTGRFRDMRGKEVAINDSIVILSTR 870
Query: 777 -ADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKT--TKRRASWLDEEERS--- 830
A ++ + +G E+K+ LA+ QL++ I T T R + + S
Sbjct: 871 LARCSKNASVGVEEGHIFSEEKI--LAARGQQLKILIESGTVITSRGSPSSSKVAASPSH 928
Query: 831 --TKPRKETGSGLSFDLNKAADVGDDKDG----------SHNSSDLTVDHEEEHGFTNRL 878
TK + SG + D+ DD++ H +S + D G
Sbjct: 929 PLTKIQTSVYSGCVS--KRKLDISDDREKLLESPSNPKRPHRTSSVPFDLNLPVGEDGSS 986
Query: 879 LMTPSTSTPS-------QDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSI 931
S+ + LL VD AI FK DFG++ D+ ++ +I+G ++
Sbjct: 987 DADGDDSSSNDSPDESIDSLLGLVDRAIEFKAFDFGKLANDILQELSNVLGNIMGPGSTL 1046
Query: 932 EILDEALEKLVGGVWLG---RTGLEDWTEKVLVPSLHQLKLRLPNNATAATDESATVRLE 988
E+ D A+E+++ W+ R L+ W E+V SL +LKL+ ++ A V +
Sbjct: 1047 EVGDGAMEQMLAASWVSEDRRRPLQAWLEQVFARSLEELKLK--HSKPAGNSALRLVACD 1104
Query: 989 LDDGSGSRS-------HGELLPSSIRVVVE 1011
+DG + + G LLPS R+++E
Sbjct: 1105 CEDGKAAATAAKEDGGFGPLLPS--RIILE 1132
>gi|77548259|gb|ABA91056.1| expressed protein [Oryza sativa Japonica Group]
Length = 1131
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 314/1146 (27%), Positives = 503/1146 (43%), Gaps = 229/1146 (19%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLH-VAATLLASPSGYLRQACIKS 59
M ++ +Q L+P A L+ ++A + RR H QTT LH +++ L LR A ++
Sbjct: 1 MPTPVAAARQCLSPAAVPALDAAVASSRRRAHAQTTSLHLISSLLAPPAPPLLRDALARA 60
Query: 60 HPNSSHP-LQCRALELCFSVALERLPTAQQNVSPGL---DPPISNALMAALKRAQAHQRR 115
+ P +Q +AL+LCF+V+L+RLP+ + S +PP+SN+LMAA+KR+QA+QRR
Sbjct: 61 RSAAYSPRVQLKALDLCFAVSLDRLPSVSASSSSSGAADEPPVSNSLMAAIKRSQANQRR 120
Query: 116 GCPE--------QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS- 166
P+ Q AVKVEL L+++ILDDP VSRV EA F S +K I +
Sbjct: 121 N-PDTFHFYHQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLAILRPA 179
Query: 167 -----LNSSCSVSNSSPIGL-GFRPSSRNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKI 220
L + + P+ L F + +P AG + G E + E L++
Sbjct: 180 PPMPLLGRLPTRTRPPPLFLCSFAAADDADVPSP----AGNLAGAGEENCRRIAEILSRG 235
Query: 221 ESKELDGV-----------LKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKFGNGDGV 269
+ L GV +II +D + T D++ DLG G+
Sbjct: 236 RNPMLVGVGAASAADDFAAASPYRIIHVDPN-TIDRS-------DLGVAAAMASATS-GL 286
Query: 270 ILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIG-T 328
I+ +GDLK LV + + Q+ VVAE+ +++ GR+W++G +
Sbjct: 287 IISIGDLKQLVPDEDA-----------EAQEKGRRVVAEVTRVLETH-SKVGRVWVMGWS 334
Query: 329 ATCETYLRCQVYHPSMENDWDLQAVPIAA--KTPLSGMFPRLGSNGILSSSVESLS---- 382
AT ETYL P ++ DWDLQ +PI A +G +++V + S
Sbjct: 335 ATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAATAGPAAAAAGLMPPATTVAAFSKPAA 394
Query: 383 PLKSAFQTTAAALPRRVSENLDPARRMSC-----CRQCLQNYEQELAKLSKEFEKSSSEV 437
L +F L EN A SC C+QC YEQE+A + S+S +
Sbjct: 395 SLMDSFVPFGGFLCDNYEENSLTAN--SCPQALRCQQCNDKYEQEVATI-----ISASGI 447
Query: 438 KSE-VARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPN 496
+E + LP L N G + + + +D ++ K L+KKWN+ CL H +
Sbjct: 448 TAEDHHQGGLPSLLQNGSMM-GPNNGFDPVKARDDRMVLNSKILNLRKKWNEYCLRLHQD 506
Query: 497 --------FHP---------------------SSLGHERIVPVPLSMTGLYNSNLLARQP 527
+ P S+G ++ V P +++ +++S+ AR
Sbjct: 507 HQRINRDPYKPFPRYIGVPTDKERSANSSKGSESVGVQKDVIKPCAVSAVHSSS-TARPI 565
Query: 528 FQPKVQLNRNLGDTLQLNSNMVSSQP--AERA-----------------VSPLN-SPVRT 567
P V RN L L + S ER VSP + +PV T
Sbjct: 566 SSPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNVDNPDDHVSPSSAAPVET 625
Query: 568 DLVLGRSK-------------VLESAPEKTHIEPVK-DFLGC----ISSEP--------- 600
DLVLG + +E + H+ P K D L +S +P
Sbjct: 626 DLVLGTPRECSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCSWSSIN 685
Query: 601 ----PQNKLHE------SQNDQLQK--PL-----DPDSFKRLLKSLMEKVWWQQEAASAV 643
+ LH S Q QK PL D ++K L++ L + V Q+EA SA+
Sbjct: 686 VGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEEALSAI 745
Query: 644 ATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRR 703
++ +C+ RRG ++ D+WL F G D + KK++A AL+EL+ G+ +I L
Sbjct: 746 CESIVRCR-STESRRGP-NRNDIWLCFHGSDSMAKKRIAVALAELMHGSKDNLIYLDLNL 803
Query: 704 DHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYG 763
+ + RGKT +D I E + + SV+ L++ID AD +V+ ++ A++ GR D G
Sbjct: 804 -QDWDDSSFRGKTGIDCIVEQLSKKRQSVLFLDNIDRADCLVQDSLSDAIKSGRFQDMRG 862
Query: 764 REISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIR---------- 813
+ + + + I +L+ + S L +G++ E+K+ LA+ +L++ +
Sbjct: 863 KVVDINDSIVVLSRSMIQGSKNGLEEGLSFSEEKI--LATRGHRLKILVEPGRAITSGCP 920
Query: 814 ---------------------GKTTKRRASWLDEEER-----STKPRKETGSGLSFDLNK 847
G +KR+ S D++E+ S+ R S + FDLN
Sbjct: 921 SGKVVVSPRHFLTKIQASLCSGSISKRKLSISDDQEKLQESPSSSKRLHRTSSVPFDLNL 980
Query: 848 AADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFG 907
D + D +SS HE +G T + + LL+SVD +I FKP DF
Sbjct: 981 PVDEDEPLDADDDSS----SHENSYGNTEKSI---------DALLHSVDGSINFKPFDFD 1027
Query: 908 RIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLG---RTGLEDWTEKVLVPSL 964
++ D+ + +G +EI A+E+++ W R + W E+V SL
Sbjct: 1028 KLADDMLQEFSNILRKNLGSECMLEIDVGAMEQILAAAWKSEEDRKPVPTWLEQVFARSL 1087
Query: 965 HQLKLR 970
+LKL+
Sbjct: 1088 DELKLK 1093
>gi|326488024|dbj|BAJ89851.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1134
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 320/1170 (27%), Positives = 502/1170 (42%), Gaps = 213/1170 (18%)
Query: 9 QQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSG-YLRQACIKSHPNSSHP- 66
+Q L+P A + L+ ++ A RR H QTT LH+ A LLA + LR A ++ + P
Sbjct: 9 RQCLSPAAVTALDAAVVSARRRVHAQTTSLHLVAALLAQQAPPLLRDALARARSAAYSPR 68
Query: 67 LQCRALELCFSVALERLPTAQQNVSPGL--------DPPISNALMAALKRAQAHQRRGCP 118
+Q +ALELCF+V+L+RLP+A + +PP+SN+LMAA+KR+QA+QRR P
Sbjct: 69 VQLKALELCFAVSLDRLPSASSASASTSASGADEQPEPPVSNSLMAAIKRSQANQRRN-P 127
Query: 119 E----------QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS-- 166
+ Q V+VEL QL+++ILDDP VSRV +A F S +K I +
Sbjct: 128 DTFHFYHQAAFQAATAASQVRVELSQLLLAILDDPVVSRVFDDAGFRSADIKLAILRPAP 187
Query: 167 ----LNSSCSVSNSSPIGL-GFRPSSRNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKIE 221
L + + P+ L F +P AG G E + E LA+
Sbjct: 188 PMPLLGRLPTRARPPPLFLCSFAAGDDADVPSP----AGSAAGAGEENGRRIAEILARGR 243
Query: 222 SKELDGV--LKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWL 279
+ L GV + G S + ++ G+++ +GDL+ L
Sbjct: 244 NPMLVGVGAASAAADFAAASPYRVLPVGPNSIDQTQLSVAAAMASATSGLVISVGDLREL 303
Query: 280 VEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIG-TATCETYLRCQ 338
V P+ G LQ++ + VVAE+ +++ G R+W++G +AT ETYL
Sbjct: 304 V---------PDDGELQERGR---RVVAEVTRVLETHREG--RVWVMGWSATYETYLTFL 349
Query: 339 VYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSS---VESLSPLKSAFQTTAAAL 395
P ++ DW+LQ +PI A G+ P + LS S VES SP T +
Sbjct: 350 SKFPLVDEDWELQLLPITA-VRAGGLMPPATTPPALSKSASLVESFSPFGGLVNNTYDS- 407
Query: 396 PRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKA 455
S + P + C+QC EQE+ + K S + ++ LP L N
Sbjct: 408 ---NSLAVHPGPQTLRCQQCNDRCEQEVTTIVK-----GSGITADQGG--LPSLLQNGSM 457
Query: 456 HDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH--------------PNFHPSS 501
G + + + +D ++ K K LQKKWN+ CL H PN+
Sbjct: 458 M-GLNNGLDVIKVRDDQMVLKSKILNLQKKWNEYCLRLHQGSQRINTGPYQLFPNYAAVP 516
Query: 502 LGHER-----------------IVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQL 544
+ ER I P +S T + + P P + RN G L L
Sbjct: 517 VDTERATILSKGSESVTLQRDVIRPSAVSATQTNATPKKSVSP--PSISNQRNEGLVLNL 574
Query: 545 NS-------------------NMVSSQPAERAVSP-LNSPVRTDLVLGRS---------- 574
++ S E +SP + V TDLVL
Sbjct: 575 QGRHSKGDEQFQDRHAQLRQEHLSSCHDREDHMSPSAAASVATDLVLSTPRGSSSKGTSS 634
Query: 575 ---KVLESAPEKTHIEPVKDFLGCISSEPPQ-------------------NKLHESQNDQ 612
K A + TH+ P K + ++ EPPQ + LH +
Sbjct: 635 VSWKHAVDAEKSTHLTPNK--VDDLNMEPPQPFAQPYSSRSSTNMGQTSPSALHSPASGG 692
Query: 613 L-------QKPL-------DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR 658
+ QKP D +K L++ L + V Q+EA SA+ ++ C+ +RR
Sbjct: 693 VSAFGQWRQKPSQLAAQGSDLSDYKLLVERLFKVVGRQEEALSAICGSIVGCQ-STERRR 751
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTAL 718
GA K D+W F G D V K+++A AL+ELV G+ I L + RGKT +
Sbjct: 752 GASRKNDIWFSFHGFDSVAKRRVAVALAELVHGSQDSFIHLDLSL-QDWGGSSFRGKTGI 810
Query: 719 DKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT-- 776
D I E + + VI L++ID+AD +V+ ++ A++ GR D G+E+++ + I IL+
Sbjct: 811 DCIVEELSKKRRCVIFLDNIDKADCLVQDSLSHAVDTGRFRDMRGKEVAINDSIVILSTR 870
Query: 777 -ADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKT--TKRRASWLDEEERS--- 830
A ++ + +G E+K+ LA+ QL++ I T T R + + S
Sbjct: 871 LARCSKNASVGVEEGHIFSEEKI--LAARGQQLKILIESGTVITSRGSPSSSKVAASPSH 928
Query: 831 --TKPRKETGSGLSFDLNKAADVGDDKDG----------SHNSSDLTVDHEEEHGFTNRL 878
TK + SG + D+ DD++ H +S + D G
Sbjct: 929 PLTKIQTSVYSGCVS--KRKLDISDDREKLLESPSNPKRPHRTSSVPFDLNLPVGEDGSS 986
Query: 879 LMTPSTSTPS-------QDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSI 931
S+ + LL VD AI FK DFG++ D+ ++ +I+G ++
Sbjct: 987 DADGDDSSSNDSPDESIDSLLGLVDRAIEFKAFDFGKLANDILQELSNVLGNIMGPGSTL 1046
Query: 932 EILDEALEKLVGGVWLG---RTGLEDWTEKVLVPSLHQLKLRLPNNATAATDESATVRLE 988
E+ D A+E+++ W R L+ W E+V SL +LKL+ ++ A V +
Sbjct: 1047 EVGDGAMEQMLAASWASEDRRRPLQAWLEQVFARSLEELKLK--HSKPAGNSALRLVACD 1104
Query: 989 LDDGSGSRS-------HGELLPSSIRVVVE 1011
+DG + + G LLPS R+++E
Sbjct: 1105 CEDGKAAATAAKEDGGFGPLLPS--RIILE 1132
>gi|449457275|ref|XP_004146374.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101213124 [Cucumis sativus]
Length = 1009
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 199/532 (37%), Positives = 265/532 (49%), Gaps = 116/532 (21%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLAS-PSGYLRQACIKS 59
MR+G QT TPEAASVL S++ A RR H Q TPLHVA TL +S S LRQAC+KS
Sbjct: 1 MRSGGCAANQTFTPEAASVLKQSLSLARRRGHAQLTPLHVAVTLFSSRSSNLLRQACLKS 60
Query: 60 HPN-SSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCP 118
P+ +SHPL CRALELCF+VAL RLPT + G P +SNAL+AALKRAQA+QRRGC
Sbjct: 61 QPHQTSHPLHCRALELCFNVALNRLPTTPGPLFHG-QPSLSNALIAALKRAQANQRRGC- 118
Query: 119 EQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSP 178
QP+LA+KVELEQLIISILDDPSVSRVMREA FSS VK+ +E S SS S
Sbjct: 119 ---XQPVLAIKVELEQLIISILDDPSVSRVMREAGFSSTLVKSNLEDSSVSSVFHCYGSS 175
Query: 179 IGLGFRPSS-----------RNLYMNP------------------------RLQQAG--- 200
G+ PSS NL NP R+
Sbjct: 176 GGIFSSPSSPSRTDHHSDQRDNLIFNPGDFWQTQFLTRSSEQNPLPFSPQKRVPNTNVIA 235
Query: 201 ---------------GVCGGQSEPEMVVRESLAKIES-----------KELDGVLKNVQI 234
+ G + + +++ +S+ IE E+ LK+ +
Sbjct: 236 ESASSLKLDIKLVFEAMLGRKRKNTVIIGDSITMIEGLISELMGRVARGEVPNELKSTKF 295
Query: 235 IRL----DKDFTCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQV-----T 285
I D + + I K+ +L I++ G G I+ GDLKW+VE V T
Sbjct: 296 IEFLLSPDSLSSMKREDIEMKVAELRRNIDSITSRGWGAIIYTGDLKWMVETDVREREET 355
Query: 286 SFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSME 345
SF + Q + ++ EI +L++ +LWL+GTA+ +TY+RCQ+ HP++E
Sbjct: 356 SFSSSKEASSYSQ---IDHMIEEISRLISFHSISCTKLWLVGTASYQTYMRCQMRHPTLE 412
Query: 346 NDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSEN--- 402
WDLQAVP+ S+G L S+ S S L + T P +V E
Sbjct: 413 TRWDLQAVPVP-------------SDGSLGLSLHSFS-LHGSRTTALGHNPSQVWETKPF 458
Query: 403 ---LDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLH 451
+ ++SCC C N+++E+ L KSS + + LP WL
Sbjct: 459 GIGKEGQEKLSCC-DCSSNHDKEVHPL-----KSSQQKE-------LPSWLQ 497
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 113/262 (43%), Gaps = 46/262 (17%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
L KSL E V WQ + ++A + K N + W+L G D++GK+++A A
Sbjct: 630 LCKSLAENVPWQSDTIPSIAKALMSFKSKNEEL--------FWILIEGNDKIGKRRLARA 681
Query: 685 LSELVSGASPIMIPLGPRRDHEE-PEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADM 743
++E + G+ + + R ++EE P ++ + A+K V+L+EDID+ D
Sbjct: 682 IAESIFGSVEQLCKINARGNNEENPPSKI--------VENAMKTQEKLVVLVEDIDQGDP 733
Query: 744 VVRGNIKRAMERGRLVDSYGREISLGNVIFILTA-----DWLPDSLKFLSQGI------- 791
+ + G+ ++ IFILT+ D DS+ ++ I
Sbjct: 734 QFMKFLADGFQSGKFGGMDEKDRDTRQFIFILTSGGEGGDKETDSIIPMTMNIAINTGFG 793
Query: 792 --TLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGLSFDLNKAA 849
+LD+K+ EW+ ++ + + T + EEE P T + +N +
Sbjct: 794 ALSLDQKR-----RAEWESPINTKHQRT------IKEEEEDANPNTNTIDAVK--INGSG 840
Query: 850 DVGDDKDGSHNSSDLTVDHEEE 871
+ + S N DL + EE+
Sbjct: 841 SLS--RQSSFNKLDLNLKAEED 860
>gi|255556741|ref|XP_002519404.1| conserved hypothetical protein [Ricinus communis]
gi|223541471|gb|EEF43021.1| conserved hypothetical protein [Ricinus communis]
Length = 1008
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 194/565 (34%), Positives = 274/565 (48%), Gaps = 130/565 (23%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MR+G T+QQTLT EAASVL HS++ A RR H Q TPLHVAATLL+S + LR+AC+KS
Sbjct: 1 MRSGACTVQQTLTAEAASVLKHSLSLARRRGHAQVTPLHVAATLLSSRASLLRRACLKSQ 60
Query: 61 PN-SSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
P+ +SHPLQCRALELCF+VAL RLPT + G P +SNAL+AALKRAQAHQRRGC E
Sbjct: 61 PHQNSHPLQCRALELCFNVALNRLPTTPGPLLHG-QPSLSNALIAALKRAQAHQRRGCIE 119
Query: 120 QQQQ-PLLAVKVELEQLIISILD-----------------------DPSVSRVMREAS-- 153
QQQQ PLL +KVELEQLIISILD D S S V + +
Sbjct: 120 QQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTSVKSNIEDSSASSVFQCYTTS 179
Query: 154 ---FSSPAVKATIEQSLNSSCSVSNSSPIG-------LGFRPS---SRNLYMNP------ 194
FSSP+ + + + S + + L F P S N + +
Sbjct: 180 GGVFSSPSSPGETHREIINPTSFWQTHFLSYSAEKNPLLFSPQKKLSTNYFTDSSASVKE 239
Query: 195 ----------RLQQAGGVCGGQ--SEPEMVVRESLAKIESKELDGVLKNVQIIRLD---- 238
R ++ V G S E +V E + ++E E+ LK +Q ++
Sbjct: 240 DIKLVFEVFLRKKKKNTVIVGDRVSITEGLVGELMGRVERGEVPAELKQIQFVKFQFAPV 299
Query: 239 -------KDFTCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPN 291
+D + + K+ +G GVI+ GDLKW VE+
Sbjct: 300 SLRFMKKEDVEMNITQLKRKVDSIG---------DSGVIIYTGDLKWTVEE--------- 341
Query: 292 SGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQ 351
+ + + +VAE G+L++ + R+WL+ TA +TY+RCQ+ PS+E +W LQ
Sbjct: 342 -SAINGEYSPVDHLVAETGRLLSDYSCSNARVWLMATANYQTYMRCQMRQPSLEIEWALQ 400
Query: 352 AVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRR--VSENLDPARRM 409
AV + P G+ L + I S + + Q + L + +S + D ++
Sbjct: 401 AVSV----PSGGLGLSLHGSSIHESRM-------TFNQNPSQVLETKPLISNSKDEQDKL 449
Query: 410 SCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENK 469
+CC +C+ +YE+E ++V V + LP WL N + +D E
Sbjct: 450 TCCPECISSYEKE------------AQVLKSVQQKNLPPWL-NPRGTTTNDMNEE----- 491
Query: 470 DQDLIWKQKSQELQKKWNDTCLNQH 494
EL++KWN C H
Sbjct: 492 ----------AELRRKWNGLCQGLH 506
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 169/414 (40%), Gaps = 68/414 (16%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
L + L + V WQ E ++A + + K R+G WLL G D VGK+ +A
Sbjct: 629 LCRLLQDNVPWQSEIIHSIAEALFESK---SNRKGT------WLLIQGNDIVGKRILALT 679
Query: 685 LSELVSGASPIMIPLG-PRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADM 743
++E V G++ ++ + RRD+E + I A + V L+EDID +D
Sbjct: 680 IAESVLGSADSLLYINMKRRDNEAVPYS-------EMITRAFRSQERLVALVEDIDFSDT 732
Query: 744 VVRGNIKRAMERGRLVDSYGREISLGNVIFILT--ADWLPDSLKFLSQGITLDEKKLTSL 801
+ + E G+ +G +LG IFILT +D++ G T ++ + +
Sbjct: 733 HLLKFLADGFESGK----FGESGNLGQAIFILTRGSDFMG-----YEHGKT-NQNSVIRM 782
Query: 802 ASGEWQLRLSIRG--KTTKRRASWLDEEERSTKPRKETGSGLSFDLNKAADVGD--DKDG 857
Q +L G T ++R + D R PR E D + D +
Sbjct: 783 TLEVKQTKLDSFGTPNTDRKRKAERDISGRRKAPRSEEKE----DAENGSSKKDCFSRQT 838
Query: 858 SHNSSDLTV---DHEEEHGFTNRLLMTPSTSTPSQD----------LLNSVDSAIVFKPV 904
S N+ DL + + ++EHG + +P +S +++ L+ + + V
Sbjct: 839 SFNTLDLNIKANEEDDEHGEEKHVEFSPISSDLTREAASDPVAPSRFLDLIKNRFVLNRN 898
Query: 905 DF-GR--IRRDVTNAITKKFSSIIGDALSI--EILDEALEKLVGGV-WLGRTGLEDWTEK 958
D GR +R + + + K GD SI I + E++V ++ + +E W +
Sbjct: 899 DGQGRKIMREEFSTKMNKCVEEAFGDQNSIGFSIEERVSEEIVDKFGYIVNSVIERWLKD 958
Query: 959 VLVPSLHQLKLRLPNNATAATDESATVRLEL----DDGSGSRSHGELLPSSIRV 1008
+ +LH +K+ E +RL D G G LP I+V
Sbjct: 959 IFQTTLHTIKI--------GGKEGTVIRLCFEGTNDKVLGDGFMGTCLPKKIQV 1004
>gi|449503003|ref|XP_004161803.1| PREDICTED: uncharacterized protein LOC101225921 [Cucumis sativus]
Length = 1020
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 203/539 (37%), Positives = 269/539 (49%), Gaps = 119/539 (22%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLAS-PSGYLRQACIKS 59
MR+G QT TPEAASVL S++ A RR H Q TPLHVA TL +S S LRQAC+KS
Sbjct: 1 MRSGGCAANQTFTPEAASVLKQSLSLARRRGHAQLTPLHVAVTLFSSRSSNLLRQACLKS 60
Query: 60 HPN-SSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCP 118
P+ +SHPL CRALELCF+VAL RLPT + G P +SNAL+AALKRAQA+QRRGC
Sbjct: 61 QPHQTSHPLHCRALELCFNVALNRLPTTPGPLFHG-QPSLSNALIAALKRAQANQRRGCL 119
Query: 119 EQQQQ-------PLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSC 171
EQQQQ P+LA+KVELEQLIISILDDPSVSRVMREA FSS VK+ +E S SS
Sbjct: 120 EQQQQQQQQQHQPVLAIKVELEQLIISILDDPSVSRVMREAGFSSTLVKSNLEDSSVSSV 179
Query: 172 SVSNSSPIGLGFRPSS-----------RNLYMNP------------------------RL 196
S G+ PSS NL NP R+
Sbjct: 180 FHCYGSSGGIFSSPSSPSRTDHHSDQRDNLIFNPGDFWQTQFLTRSSEQNPLPFSPQKRV 239
Query: 197 QQAG------------------GVCGGQSEPEMVVRESLAKIES-----------KELDG 227
+ G + + +++ +S+ IE E+
Sbjct: 240 PNTNVIAESASSLKLDIKLVFEAMLGRKRKNTVIIGDSITMIEGLISELMGRVARGEVPN 299
Query: 228 VLKNVQIIRL----DKDFTCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQ 283
LK+ + I D + + I K+ +L I++ G G I+ GDLKW+VE
Sbjct: 300 ELKSTKFIEFLLSPDSLSSMKREDIEMKVAELRRNIDSITSRGWGAIIYTGDLKWMVETD 359
Query: 284 V-----TSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQ 338
V TSF + Q + ++ EI +L++ +LWL+GTA+ +TY+RCQ
Sbjct: 360 VREREETSFSSSKEASSYSQ---IDHMIEEISRLISFHSISCTKLWLVGTASYQTYMRCQ 416
Query: 339 VYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRR 398
+ HP++E WDLQAVP+ S+G L S+ S S L + T P +
Sbjct: 417 MRHPTLETRWDLQAVPVP-------------SDGSLGLSLHSFS-LHGSRTTALGHNPSQ 462
Query: 399 VSEN------LDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLH 451
V E + ++SCC C N+++E+ L KSS + + LP WL
Sbjct: 463 VWETKPFGIGKEGQEKLSCC-DCSSNHDKEVHPL-----KSSQQKE-------LPSWLQ 508
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 113/262 (43%), Gaps = 46/262 (17%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
L KSL E V WQ + ++A + K N + W+L G D++GK+++A A
Sbjct: 641 LCKSLAENVPWQSDTIPSIAKALMSFKSKNEEL--------FWILIEGNDKIGKRRLARA 692
Query: 685 LSELVSGASPIMIPLGPRRDHEE-PEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADM 743
++E + G+ + + R ++EE P ++ + A+K V+L+EDID+ D
Sbjct: 693 IAESIFGSVEQLCKINARGNNEENPPSKI--------VENAMKTQEKLVVLVEDIDQGDP 744
Query: 744 VVRGNIKRAMERGRLVDSYGREISLGNVIFILTA-----DWLPDSLKFLSQGI------- 791
+ + G+ ++ IFILT+ D DS+ ++ I
Sbjct: 745 QFMKFLADGFQSGKFGGMDEKDRDTRQFIFILTSGGEGGDKETDSIIPMTMNIAINTGFG 804
Query: 792 --TLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGLSFDLNKAA 849
+LD+K+ EW+ ++ + + T + EEE P T + +N +
Sbjct: 805 ALSLDQKR-----RAEWESPINTKHQRT------IKEEEEDANPNTNTIDAVK--INGSG 851
Query: 850 DVGDDKDGSHNSSDLTVDHEEE 871
+ + S N DL + EE+
Sbjct: 852 SLS--RQSSFNKLDLNLKAEED 871
>gi|449437858|ref|XP_004136707.1| PREDICTED: uncharacterized protein LOC101217335 [Cucumis sativus]
Length = 757
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 163/395 (41%), Positives = 222/395 (56%), Gaps = 62/395 (15%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MR G T+QQ LT EA +V+ ++ A RR H Q TPLHVA+T+L+ P+G LR AC++SH
Sbjct: 1 MRTGGCTVQQALTCEALNVVKQAVILAKRRGHAQVTPLHVASTMLSPPTGLLRTACLQSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPIS-----------NALMAALKRA 109
SHPLQC+ALELCF+VAL RLP A + P L P NAL+AA KRA
Sbjct: 61 ---SHPLQCKALELCFNVALNRLP-ASNSTPPILTPSSHHHHHQSHPSISNALVAAFKRA 116
Query: 110 QAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNS 169
QAHQRRG E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VK +EQ+++
Sbjct: 117 QAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREARFSSTQVKTKVEQAISI 176
Query: 170 SCSVSNSSPIGLGF-------------------RPSSRNLY--------MNPRLQQAGGV 202
N++P R ++ M R G
Sbjct: 177 E---HNTTPASNNNDDNSNNNTTLLGGATTTSGRAREEDIAAVINELAEMKKRSLVVVGE 233
Query: 203 CGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFTCDKAGIV--SKLKDLGALIE 260
C G E VV ++ ++E KE+ LK V+ I L D++ I K+ +L +LI
Sbjct: 234 CVGNV--ECVVEAAIGRVEKKEVPECLKEVKFINLSISSFRDRSRIEVDEKVMELKSLIR 291
Query: 261 TKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFG--- 317
+ + G GVIL +GD+KW ++ + ++ +S + + ++ E+GKLV +G
Sbjct: 292 SNYCIGKGVILYVGDIKWSIDYR-ENYYYHSSNQRRGYYCPVEHMIMELGKLV--YGNYD 348
Query: 318 -------GGGGRLWLIGTATCETYLRCQVYHPSME 345
GGG +W++G AT +TY+RC+ +PS+E
Sbjct: 349 QQIHQPKGGGVNVWIMGIATFQTYMRCKTGNPSLE 383
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 99/182 (54%), Gaps = 18/182 (9%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDM----WLLF 670
K L+ ++FKRL +L +KV WQ+ +A+ V QC+ G G+R+G GD WLLF
Sbjct: 490 KELNSENFKRLCNALEKKVPWQKNVVGDIASAVLQCRSGMGRRKGKMGHGDFKEETWLLF 549
Query: 671 MGPDRVGKKKMASALSELVSGA------SPIMIPLGPRRDHEEPEVRVRGK--------T 716
G D GK+K+A L+ ++ G+ S + R + E R K +
Sbjct: 550 QGNDLRGKEKVAEELARVIFGSATSNLVSITLSSFSSTRSADSTEDNCRNKRSRDEQSCS 609
Query: 717 ALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT 776
L++ EAV NP V L+ED+++AD + KRA+E GR+ +S G+++SL + I IL+
Sbjct: 610 YLERFAEAVSINPHRVFLVEDVEQADYSSQMGFKRAIEGGRITNSDGQQVSLADSIVILS 669
Query: 777 AD 778
+
Sbjct: 670 CE 671
>gi|449527911|ref|XP_004170951.1| PREDICTED: chaperone protein ClpB1-like, partial [Cucumis sativus]
Length = 405
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 164/405 (40%), Positives = 225/405 (55%), Gaps = 62/405 (15%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MR G T+QQ LT EA +V+ ++ A RR H Q TPLHVA+T+L+ P+G LR AC++SH
Sbjct: 1 MRTGGCTVQQALTCEALNVVKQAVILAKRRGHAQVTPLHVASTMLSPPTGLLRTACLQSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPIS-----------NALMAALKRA 109
SHPLQC+ALELCF+VAL RLP A + P L P NAL+AA KRA
Sbjct: 61 ---SHPLQCKALELCFNVALNRLP-ASNSTPPILTPSSHHHHHQSHPSISNALVAAFKRA 116
Query: 110 QAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNS 169
QAHQRRG E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VK +EQ+++
Sbjct: 117 QAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREARFSSTQVKTKVEQAISI 176
Query: 170 SCSVSNSSPIGLGF-------------------RPSSRNLY--------MNPRLQQAGGV 202
N++P R ++ M R G
Sbjct: 177 E---HNTTPASNNNDDNSNNNTTLLGGATTTSGRAREEDIAAVINELAEMKKRSLVVVGE 233
Query: 203 CGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFTCDKAGIV--SKLKDLGALIE 260
C G E VV ++ ++E KE+ LK V+ I L D++ I K+ +L +LI
Sbjct: 234 CVGNV--ECVVEAAIGRVEKKEVPECLKEVKFINLSISSFRDRSRIEVDEKVMELKSLIR 291
Query: 261 TKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFG--- 317
+ + G GVIL +GD+KW ++ + ++ +S + + ++ E+GKLV +G
Sbjct: 292 SNYCIGKGVILYVGDIKWSIDYR-ENYYYHSSNQRRGYYCPVEHMIMELGKLV--YGNYD 348
Query: 318 -------GGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPI 355
GGG +W++G AT +TY+RC+ +PS+E + + I
Sbjct: 349 QQIHQPKGGGVNVWIMGIATFQTYMRCKTGNPSLETLLAIHPLTI 393
>gi|218186254|gb|EEC68681.1| hypothetical protein OsI_37135 [Oryza sativa Indica Group]
Length = 1129
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 316/1144 (27%), Positives = 505/1144 (44%), Gaps = 227/1144 (19%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLH-VAATLLASPSGYLRQACIKS 59
M ++ +Q L+P A L+ ++A A RR H QTT LH +++ L LR A ++
Sbjct: 1 MPTPVAAARQCLSPAAVPALDAAVASARRRAHAQTTSLHLISSLLAPPAPPLLRDALARA 60
Query: 60 HPNSSHP-LQCRALELCFSVALERLPTAQQNVSPGL--DPPISNALMAALKRAQAHQRRG 116
+ P +Q +AL+LCF+V+L+RLP+ + S G +PP+SN+LMAA+KR+QA+QRR
Sbjct: 61 RSAAYSPRVQLKALDLCFAVSLDRLPSVSASSSSGAADEPPVSNSLMAAIKRSQANQRRN 120
Query: 117 CPE--------QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS-- 166
P+ Q AVKVEL L+++ILDDP VSRV EA F S +K I +
Sbjct: 121 -PDTFHFYHQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLAILRPAP 179
Query: 167 ----LNSSCSVSNSSPIGL-GFRPSSRNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKIE 221
L + + P+ L F + +P AG + G E + E L++
Sbjct: 180 PMPLLGRLPTRTRPPPLFLCSFAAADDADVPSP----AGNLAGAGEENCRRIAEILSRGR 235
Query: 222 SKELDGV-----------LKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKFGNGDGVI 270
+ L GV +II +D + T D++ DLG G+I
Sbjct: 236 NPMLVGVGAASAADDFAAASPYRIIHVDPN-TIDRS-------DLGVAAAMASATS-GLI 286
Query: 271 LDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIG-TA 329
+ +GDLK LV + + Q+ VVAE+ + V GR+W++G +A
Sbjct: 287 ISIGDLKQLVPDEDA-----------EAQENGRRVVAEVTR-VLETHSKVGRVWVMGWSA 334
Query: 330 TCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGIL--SSSVESLS----P 383
T ETYL P ++ DWDLQ +PI A + G++ +++V + S
Sbjct: 335 TYETYLAFLSKFPLVDKDWDLQLLPITAVHAAPAAAGPAAAGGLMPPATTVAAFSKPAAS 394
Query: 384 LKSAFQTTAAALPRRVSENLDPARRMSC-----CRQCLQNYEQELAKLSKEFEKSSSEVK 438
L +F L EN A SC C+QC YEQE+A + S+S +
Sbjct: 395 LMDSFVPFGGFLCDNYEENSLTAN--SCPQALRCQQCNDKYEQEVATI-----ISASGIT 447
Query: 439 SE-VARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH--- 494
+E + LP L N G + + + +D ++ K L+KKWN+ CL H
Sbjct: 448 AEDHHQGGLPSLLQNGSMM-GPNNGFDPVKVRDDRMVLNSKILNLRKKWNEYCLRLHQDC 506
Query: 495 -----------PNF-----------HPS----SLGHERIVPVPLSMTGLYNSNLLARQPF 528
P + +PS S+G ++ V P +++ +++S+ AR
Sbjct: 507 QRINRDPYKPFPRYIGVPADKERSANPSKGSESIGVQKDVIKPCAVSAVHSSS-TARPIS 565
Query: 529 QPKVQLNRNLGDTLQLNSNMVSS--------------------QPAERAVSPLNSPVRTD 568
P V RN L L + S P + A +PV TD
Sbjct: 566 SPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNADNPDDHASPSSAAPVETD 625
Query: 569 LVLGRSK-------------VLESAPEKTHIEPVK-DFLGC----ISSEP---------- 600
LVLG + +E + H+ P K D L +S +P
Sbjct: 626 LVLGTPRDCSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCSWSSINV 685
Query: 601 ---PQNKLHE------SQNDQLQK--PL-----DPDSFKRLLKSLMEKVWWQQEAASAVA 644
+ LH S Q QK PL D ++K L++ L + V Q+EA SA+
Sbjct: 686 GKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEEAMSAIC 745
Query: 645 TTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRD 704
++ +C+ RRG S+ D+WL F G D + KK++A AL+EL+ G+ +I L
Sbjct: 746 ESIVRCR-STESRRGP-SRNDIWLCFHGSDSMAKKRIAVALAELMHGSKENLIYLDLNL- 802
Query: 705 HEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGR 764
+ + RGKT +D I E + + SV+ L++ID AD +V+ ++ A++ GR D G+
Sbjct: 803 QDWDDSSFRGKTGIDCIVEQLSKKRRSVLFLDNIDRADCLVQDSLSDAIKSGRFQDMRGK 862
Query: 765 EISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIR----------- 813
+ + + I +L+ + S L +G++ E+K+ LA+ +L++ +
Sbjct: 863 VVDINDSIVVLSRSMIHGSKNGLEEGLSFSEEKI--LATRGHRLKILVEPGRAITSGCPS 920
Query: 814 --------------------GKTTKRRASWLDEEER-----STKPRKETGSGLSFDLNKA 848
G +KR+ S D++E+ S+ R S + FDLN
Sbjct: 921 GKVVVSPRHFLTKIQASLCSGSISKRKLSMSDDQEKLQESPSSLKRLHRTSSIPFDLNLP 980
Query: 849 ADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGR 908
D + D +SS HE +G T + + LL+SVD +I FKP DF +
Sbjct: 981 VDEDEPLDADDDSS----SHENSYGNTEKSI---------DALLHSVDGSINFKPFDFDK 1027
Query: 909 IRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLG--RTGLEDWTEKVLVPSLHQ 966
+ D+ + +G +EI A+E+++ W + ++ W E+V SL +
Sbjct: 1028 LADDMLQEFSNILRKNLGAECMLEIDVGAMEQILAAAWKSEDKGPVQTWLEQVFARSLDE 1087
Query: 967 LKLR 970
LKL+
Sbjct: 1088 LKLK 1091
>gi|413939265|gb|AFW73816.1| hypothetical protein ZEAMMB73_717603 [Zea mays]
Length = 953
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 202/533 (37%), Positives = 288/533 (54%), Gaps = 98/533 (18%)
Query: 12 LTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRA 71
LTP+AA+VL+ + A+ASRR H TTPLH AA LL+ P+ LR AC+ S HPL+CRA
Sbjct: 21 LTPDAAAVLSRAAADASRRRHAHTTPLHAAAALLSGPAPLLRDACVAGL-ASPHPLRCRA 79
Query: 72 LELCFSVALERLPTAQ--QNVSPGL------DPPISNALMAALKRAQAHQRR---GCPEQ 120
L+LCFSVAL+RLPT+ Q+ G PP+SNAL AALKRA AH RR G E
Sbjct: 80 LDLCFSVALDRLPTSTELQHHEGGAFHHASAAPPLSNALAAALKRAYAHHRRIGSGGVET 139
Query: 121 QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIG 180
+V + L+++ILDDPSV+RVMREASFSS AVKA + +SL+ + ++ +
Sbjct: 140 DDH-----RVGVPHLVLAILDDPSVARVMREASFSSTAVKAAMLRSLSDPAAPDAAAYVS 194
Query: 181 --LGFRPSS--------------RNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKIESKE 224
+ R +S R NP L G + + VV+E + I+ +
Sbjct: 195 ARVMHRQASHREEEVAKVVEVLKRAKKRNPVL------VGDTVDVDAVVQEVVTLIQRQR 248
Query: 225 LDGVLKNVQIIRLDKDF----TCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLV 280
L N ++I K+F D+A + +K+K+LG + + + GV+++LG+L+WLV
Sbjct: 249 LG----NARVISFPKEFGDLVDMDRARLTAKVKELGEAVRSASASA-GVVVNLGNLQWLV 303
Query: 281 EQQVTSFGVPNSGTLQQQQQVLAEVV--------AEIGKLVARFGGGGGRLWLIGTATCE 332
E++ + P +QQQ+ +VV AE+ +++ G G R+W+IGTATC
Sbjct: 304 EERCAA---PRG---EQQQEKRRDVVLDTARAAVAEMARVLNLSGEGEHRVWVIGTATCA 357
Query: 333 TYLRCQVYHPSMENDWDLQAVPIAAKTPLS-----GMFPRLGSN-GILSSSVESLSPLKS 386
TYL+CQVYHP++E++WDLQAVPI + P G+ P G N GILSSSVE LS
Sbjct: 358 TYLKCQVYHPALESEWDLQAVPITPRPPPPPPPPLGLSPSAGVNRGILSSSVEVLS---- 413
Query: 387 AFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLL 446
TA P + R S C C + YE+E A E +SSE A +
Sbjct: 414 ----TAMTSPMQ--------RAPSLCSACAEGYERERA------EMASSERAPCPAEQPM 455
Query: 447 PQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHP 499
QWL G + A++ + K +++ EL+++W D C H + P
Sbjct: 456 SQWLQIGTPSSG--RPADRAQEK------AREADELRRRWRDRCAQLHSHGRP 500
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 144/409 (35%), Positives = 213/409 (52%), Gaps = 37/409 (9%)
Query: 623 KRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
K L++ L E V WQ EAA+AVA+T+ + + +RR + D W++F GPD GK+ MA
Sbjct: 556 KLLVRRLTEAVRWQPEAAAAVASTIAKARSSESRRRRTTAGVDAWIVFAGPDVAGKRSMA 615
Query: 683 SALSELVSGASPIMIPLG-PRR--DHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDID 739
ALS+ V G + + LG P+ D E V RG+TALD++ EA++ NPF V++L+ +D
Sbjct: 616 EALSKSVFGTGAVTLRLGWPQAGDDGGESVVSCRGQTALDRMAEAIRANPFRVVVLDGVD 675
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLT 799
AD VV +I RA+E GRL DS+GR+++LGN IF++ + W P + + + ++
Sbjct: 676 HADSVVHASILRAVESGRLSDSHGRDVALGNNIFVVISQWSPPLPE--PEHLRKSQEAEP 733
Query: 800 SLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETG-SGLSFDLNKA-----ADVGD 853
L +W L + KRR E +R TK RK + L DLN + D D
Sbjct: 734 FLPDSQWNLEHGMTAGGKKRRPEQQLEGDRRTKARKHSAREPLPLDLNLSMSDDHTDAVD 793
Query: 854 DK--DGSHN-SSDLTVDHEEEH---GFTNRLLMTPSTSTPSQDLLNSVDSAIVFK-PVDF 906
D +GS N SSDLTV+HE+E+ + R P T + +L+ +VD +VFK PV
Sbjct: 794 DSGGEGSRNSSSDLTVEHEQEYVQPAHSGRCSAAPLTVS---ELIKAVDGVVVFKPPVSL 850
Query: 907 GRIRRDVTNAIT--KKFSSIIGDALSIEILD---EALEKLVGGVWLGRTGLEDWTE-KVL 960
++R V++ + K I + + D L G T +E WT +VL
Sbjct: 851 EPLKRSVSDLVVPAAKLGEITVGGWPVHVDDGLLGRLAARAAGAAAAGTPMEAWTTGEVL 910
Query: 961 VP-SLHQLKLRLPNNATAATDESATVRLELDDGSGSRSHGELLPSSIRV 1008
P S+ Q K L +N + ATV +GS R GE+ P + V
Sbjct: 911 CPSSMRQFKRSLSSNDV----DGATV-----EGSRRRKDGEMFPMPVTV 950
>gi|115486876|ref|NP_001065925.1| Os12g0104300 [Oryza sativa Japonica Group]
gi|108862072|gb|ABA95594.2| expressed protein [Oryza sativa Japonica Group]
gi|113648432|dbj|BAF28944.1| Os12g0104300 [Oryza sativa Japonica Group]
Length = 1129
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 316/1144 (27%), Positives = 504/1144 (44%), Gaps = 227/1144 (19%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLH-VAATLLASPSGYLRQACIKS 59
M ++ +Q L+P A L+ ++A A RR H QTT LH +++ L LR A ++
Sbjct: 1 MPTPVAAARQCLSPAAVPALDAAVASARRRAHAQTTSLHLISSLLAPPAPPLLRDALARA 60
Query: 60 HPNSSHP-LQCRALELCFSVALERLPTAQQNVSPGL--DPPISNALMAALKRAQAHQRRG 116
+ P +Q +AL+LCF+V+L+RLP+ + S G +PP+SN+LMAA+KR+QA+QRR
Sbjct: 61 RSAAYSPRVQLKALDLCFAVSLDRLPSVSASSSSGAADEPPVSNSLMAAIKRSQANQRRN 120
Query: 117 CPE--------QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS-- 166
P+ Q AVKVEL L+++ILDDP VSRV EA F S +K I +
Sbjct: 121 -PDTFHFYHQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLAILRPAP 179
Query: 167 ----LNSSCSVSNSSPIGL-GFRPSSRNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKIE 221
L + + P+ L F + +P AG + G E + E L++
Sbjct: 180 PMPLLGRLPTRTRPPPLFLCSFAAADDADVPSP----AGNLAGAGEENCRRIAEILSRGR 235
Query: 222 SKELDGV-----------LKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKFGNGDGVI 270
+ L GV +II +D + T D++ DLG G+I
Sbjct: 236 NPMLVGVGAASAADDFAAASPYRIIHVDPN-TIDRS-------DLGVAAAMASATS-GLI 286
Query: 271 LDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIG-TA 329
+ +GDLK LV + + Q+ VVAE+ + V GR+W++G +A
Sbjct: 287 ISIGDLKQLVPDEDA-----------EAQENGRRVVAEVTR-VLEAHSKVGRVWVMGWSA 334
Query: 330 TCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGIL--SSSVESLS----P 383
T ETYL P ++ DWDLQ +PI A + G++ +++V + S
Sbjct: 335 TYETYLAFLSKFPLVDKDWDLQLLPITAVHAAPAAAGPAAAGGLMPPATTVAAFSKPAAS 394
Query: 384 LKSAFQTTAAALPRRVSENLDPARRMSC-----CRQCLQNYEQELAKLSKEFEKSSSEVK 438
L +F L EN A SC C+QC YEQE+A + S+S +
Sbjct: 395 LMDSFVPFGGFLCDNYEENSLTAN--SCPQALRCQQCNDKYEQEVATI-----ISASGIT 447
Query: 439 SE-VARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH--- 494
+E + LP L N G + + + +D ++ K LQKKWN+ CL H
Sbjct: 448 AEDHHQGGLPSLLQNGSMM-GPNNGFDPVKVRDDRMVLNSKILNLQKKWNEYCLRLHQDC 506
Query: 495 -----------PNF-----------HPS----SLGHERIVPVPLSMTGLYNSNLLARQPF 528
P + +PS S+G ++ V P +++ +++S+ AR
Sbjct: 507 QRINRDPYKPFPRYIGVPADKERSANPSKGSESIGVQKDVIKPCAVSAVHSSS-TARPIS 565
Query: 529 QPKVQLNRNLGDTLQLNSNMVSS--------------------QPAERAVSPLNSPVRTD 568
P V RN L L + S P + A +PV TD
Sbjct: 566 SPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNADNPDDHASPSSAAPVETD 625
Query: 569 LVLGRSK-------------VLESAPEKTHIEPVK-DFLGC----ISSEP---------- 600
LVL + +E + H+ P K D L +S +P
Sbjct: 626 LVLCTPRDCSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCSWSSINV 685
Query: 601 ---PQNKLHE------SQNDQLQK--PL-----DPDSFKRLLKSLMEKVWWQQEAASAVA 644
+ LH S Q QK PL D ++K L++ L + V Q+EA SA+
Sbjct: 686 GKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEEAVSAIC 745
Query: 645 TTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRD 704
++ +C+ RRG S+ D+WL F G D + KK++A AL+EL+ G+ +I L
Sbjct: 746 ESIVRCR-STESRRGP-SRNDIWLCFHGSDSMAKKRIAVALAELMHGSKENLIYLDLNL- 802
Query: 705 HEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGR 764
+ + RGKT +D I E + + SV+ L++ID AD +V+ ++ A++ GR D G+
Sbjct: 803 QDWDDSSFRGKTGIDCIVEQLSKKRRSVLFLDNIDRADCLVQDSLSDAIKSGRFQDMRGK 862
Query: 765 EISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIR----------- 813
+ + + I +L+ + S L +G++ E+K+ LA+ +L++ +
Sbjct: 863 VVDINDSIVVLSRSMIHGSKNGLEEGLSFSEEKI--LATRGHRLKILVEPGRAITSGCPS 920
Query: 814 --------------------GKTTKRRASWLDEEER-----STKPRKETGSGLSFDLNKA 848
G +KR+ S D++E+ S+ R S + FDLN
Sbjct: 921 GKVVVSPRHFLTKIQASLCSGSISKRKLSMSDDQEKLQESPSSLKRLHRTSSIPFDLNLP 980
Query: 849 ADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGR 908
D + D +SS HE +G T + + LL+SVD +I FKP DF +
Sbjct: 981 VDEDEPFDADDDSS----SHENSYGNTEKSI---------DALLHSVDGSINFKPFDFDK 1027
Query: 909 IRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLG--RTGLEDWTEKVLVPSLHQ 966
+ D+ + +G +EI A+E+++ W + ++ W E+V SL +
Sbjct: 1028 LADDMLQEFSNILRKNLGAECMLEIDVGAMEQILAAAWKSEDKGPVQTWLEQVFARSLDE 1087
Query: 967 LKLR 970
LKL+
Sbjct: 1088 LKLK 1091
>gi|255551163|ref|XP_002516629.1| conserved hypothetical protein [Ricinus communis]
gi|223544231|gb|EEF45753.1| conserved hypothetical protein [Ricinus communis]
Length = 864
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 226/403 (56%), Gaps = 64/403 (15%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG+ ++QQ LT EAA+++ +++ A RR H Q TPLHVA+ +LAS +G LR+AC++SH
Sbjct: 1 MRAGICSVQQALTAEAANIVKQAVSLARRRGHAQVTPLHVASAMLASTNGLLRRACLQSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD---PPISNALMAALKRAQAHQRRGC 117
SHPLQC+ALELCF+VAL RLP + + G P +SNAL+AA KRAQAHQRRG
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASTSSALLGPHSSYPSLSNALVAAFKRAQAHQRRGS 117
Query: 118 PEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN--------- 168
E QQQP+LA+K+E+EQLIISILDDPSVSRVMREA FSS VK +EQ+++
Sbjct: 118 IENQQQPILALKIEIEQLIISILDDPSVSRVMREAGFSSTQVKNKVEQAVSLEICSQGTT 177
Query: 169 -SSC-----------SVSNSSPIGLGFRPSSRNL---------------YMNPRLQQA-- 199
+SC S +N SP L F L +N +++
Sbjct: 178 ATSCQSKEITKPQIFSTNNVSP-SLPFSHYGVTLSKPLDHEVSNDDVMSVLNTLMEKKRN 236
Query: 200 ---GGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLD----KDFTCDKAGIVSKL 252
G C +E VVR + KIE G L+ ++ I +D ++ + KL
Sbjct: 237 TIITGECLASTES--VVRLVMNKIERGLAPGELRAMRFISFPLISLRDLPQEE--VEQKL 292
Query: 253 KDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKL 312
+L +++ GV L LGD+KW+ E + +G + ++ E+ K
Sbjct: 293 VELRCTVKSYLNR--GVFLYLGDIKWVAEFW-SEYGEQRRSYYCSGEYIIMEL-----KR 344
Query: 313 VARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPI 355
+ R G RLWL+G AT +TY++C+ PS+E W+L +PI
Sbjct: 345 LIRGIGETERLWLMGVATFQTYMKCKSGRPSLETIWELYPLPI 387
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 15/179 (8%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGD---MWLLF 670
K L+ + K L SL +KV WQ++ +AT + +C+ G K +R + ++ + WL F
Sbjct: 608 KELNNQNLKILCSSLEKKVPWQKDIIPEIATAILECRSGRSKSKRKSNNRAEREETWLFF 667
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLG------PRRDHEEPEVRVRGKTAL-----D 719
+G D GK+K+A L+ LV G+ + +G R D + RG+ L +
Sbjct: 668 LGVDSEGKEKIARELARLVYGSQANFVSIGLSNYSSTRTDSTDESKNKRGRDELGCGYHE 727
Query: 720 KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ G A+ NP V +ED+++ D + IK+A+E G++ G L + I I ++
Sbjct: 728 RFGLALNENPHRVFFMEDVEQVDYCSQKAIKKAIESGKVALPGGENAPLKDAIIIFGSE 786
>gi|356498707|ref|XP_003518191.1| PREDICTED: uncharacterized protein LOC100807485 [Glycine max]
Length = 867
Score = 245 bits (626), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 219/396 (55%), Gaps = 50/396 (12%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MR G +QQ LTPEAAS++ ++ A RR H Q TPLHVA T+L+ +G LR AC++SH
Sbjct: 1 MRTGSCAVQQGLTPEAASIVKQAVTLAKRRGHAQVTPLHVANTMLSITNGLLRTACLQSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD----------PPISNALMAALKRAQ 110
SHPLQC+ALELCF+VAL RLP A + SP L P ISNAL+AA KRAQ
Sbjct: 61 ---SHPLQCKALELCFNVALNRLP-ASTSSSPMLQGSHHHHSHACPSISNALVAAFKRAQ 116
Query: 111 AHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN-S 169
AHQRRG E QQQPLLAVK++LEQLIISILDDPSVSRVMREA FSS VK+ +EQ+++
Sbjct: 117 AHQRRGSVENQQQPLLAVKIKLEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE 176
Query: 170 SCSVSNSS------------------------PIGLGFRPSSRNLYMNPRLQQAGGVCGG 205
CS N S PI + S + R + V
Sbjct: 177 ICSQDNGSGKNNNNSNKAKENNSSGEKGSVLDPIRVEDVASVIENLGSERKRSVVIVGEC 236
Query: 206 QSEPEMVVRESLAKIESKEL--DGVLKNVQIIRLD-KDF-TCDKAGIVSKLKDLGALIET 261
+ E VVR + K++ ++ + L+ V+ I L F + + K+ +L +L++
Sbjct: 237 VTSLEGVVRGVMEKVDKGDVGDECTLRGVKFISLSLSSFGNVSRVEVEQKVGELRSLVKA 296
Query: 262 KFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGG 321
+ G +L LGDLKW+ + + G G + +V EIGKLV G
Sbjct: 297 S-EHSKGYVLYLGDLKWVFD--FRARGSQGGGCYCP----VDHMVVEIGKLVNGVEENGA 349
Query: 322 RLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAA 357
R W++G AT + Y+RC+ PS+E W L + I A
Sbjct: 350 RFWVMGVATFQAYMRCKNGQPSLETLWGLHPITIPA 385
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 99/182 (54%), Gaps = 18/182 (9%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGA------GSKGDMWL 668
K L+ ++ K L +L +KV WQ++ +A+T+ QC+ G +R+G K + WL
Sbjct: 608 KELNTENLKTLCNALEKKVPWQKDIIPEIASTLLQCRSGMVRRKGKVMRNSEEVKEETWL 667
Query: 669 LFMGPDRVGKKKMASALSELVSGASPIMIPLG------PRRDHEEP---EVRVRGKTA-- 717
F G D K+K+A L+ LV G+ ++ + R D E R R +T+
Sbjct: 668 FFQGVDVEAKEKIARELARLVFGSQNDVVSIALSTFASTRADSTEDYSRNKRSREETSCS 727
Query: 718 -LDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT 776
+++ EA+ NP V L+EDI++AD + KRA+ERGR+ DS G E++L + I IL+
Sbjct: 728 YIERFAEAMACNPHRVFLVEDIEQADYCSQLGFKRAIERGRVADSKGEEVALCDAIIILS 787
Query: 777 AD 778
+
Sbjct: 788 CE 789
>gi|413918279|gb|AFW58211.1| hypothetical protein ZEAMMB73_670982 [Zea mays]
Length = 862
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 163/408 (39%), Positives = 224/408 (54%), Gaps = 61/408 (14%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQ+LT EAA+V+ +++ A RR + Q TPLHVA+ +LA+P+G LR AC++SH
Sbjct: 1 MRAGGCTVQQSLTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLAAPTGLLRAACLRSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGL-------------DPPISNALMAALK 107
SHPLQC+ALELCF+VAL RLP + S L P +SNAL+AA K
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASAAVASSPLLGGHGHHHHHHYYPPSLSNALVAAFK 117
Query: 108 RAQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSL 167
RAQAHQRRG E QQQP+LAVK+ELEQL++SILDDPSVSRVMREA FSS VKA +EQ++
Sbjct: 118 RAQAHQRRGSVESQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSSTQVKANVEQAV 177
Query: 168 --------------------NSSCSVSNSSPIGLGFRPSSRNLYMNPRLQQAGGV--C-G 204
N S S + +SP + + L+ R + V C
Sbjct: 178 CSSTTTTSTAAAATAPSKNPNPSSSAATASPPQEAAKGNKLPLH-QARDEDVAAVLDCLA 236
Query: 205 GQSEPEMVV------------RESLAKIESKEL-DGVLKNVQI--IRLDKDFTCDKAGIV 249
+S+ +VV ++ KI+S E L+ Q+ +R+ +
Sbjct: 237 SRSKRRVVVIAESAAAAEATAHAAMDKIKSAEAKHDALRGAQVVSVRVSSFREMAREETE 296
Query: 250 SKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEI 309
+L +L L+ + G V+L + DLKW E + V SG + VV E+
Sbjct: 297 RRLGELRCLVRGR--RGQVVVLVVEDLKWAAE--FWAGHVVQSGRRGYYYCSVEHVVTEL 352
Query: 310 GKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAA 357
L + GGGG WL+G T + Y RC+V PS+E+ W+LQ + + A
Sbjct: 353 RALAS--GGGGSLCWLLGFGTYQAYTRCRVGQPSLESLWELQTLTVPA 398
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 35/199 (17%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR----GAGSKGDMWLLF 670
K L+ ++ K L +L ++V WQ+E VA+ V QC+ G KRR A +K + W+LF
Sbjct: 590 KELNAENLKLLCGALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDKSRSADAKEETWMLF 649
Query: 671 MGPDRVGKKKMASALSELVSG--ASPIMIPLG------------------------PRRD 704
+G D GK+++A L+ LV G +S + I G PR
Sbjct: 650 LGGDADGKERVARELARLVFGLRSSFLSIRPGGVVSASSPPPASSGSSEGHRSSKRPRMP 709
Query: 705 HEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGR 764
EEP L+++ EAV NP VI +ED++ AD + IK A+E G + + G+
Sbjct: 710 EEEPAAYY-----LERLHEAVSENPHRVIFMEDVERADRDCQLRIKEAIESGVVRNHAGQ 764
Query: 765 EISLGNVIFILTADWLPDS 783
E+ +G+ I IL+ + DS
Sbjct: 765 EVGVGDAIVILSCESFGDS 783
>gi|115449139|ref|NP_001048349.1| Os02g0788600 [Oryza sativa Japonica Group]
gi|47497764|dbj|BAD19864.1| 101 kDa heat shock protein-like [Oryza sativa Japonica Group]
gi|113537880|dbj|BAF10263.1| Os02g0788600 [Oryza sativa Japonica Group]
Length = 965
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 278/524 (53%), Gaps = 90/524 (17%)
Query: 12 LTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRA 71
LTP+AA+VL+ + A+ASRR H TTPLH AA LL+ P+ LR AC+ S HPL+CRA
Sbjct: 23 LTPDAAAVLSRAAADASRRRHAHTTPLHAAAALLSGPAPLLRDACVAGLA-SPHPLRCRA 81
Query: 72 LELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRR---GCPEQQQQPLLAV 128
L+LCF+VAL+RLPT+ ++ PP+SNAL AALKRA AH RR G E
Sbjct: 82 LDLCFAVALDRLPTSTEHQHHHAAPPLSNALAAALKRAYAHHRRIGSGVVEADDH----- 136
Query: 129 KVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIGLGFRPSSR 188
+V + L+++ILDDPSV+RVMREASFSS AVKA + +SL+ + P S
Sbjct: 137 RVGVPHLVLAILDDPSVARVMREASFSSTAVKAAMLRSLSDPAA------------PDS- 183
Query: 189 NLYMNPRL-----------------------QQAGGVCGGQSEPEMVVRESLAKIESKEL 225
+Y+N R+ ++ + G + + VV+E + I+ + L
Sbjct: 184 GVYVNARVLHRQVSHREEEVNKVVEVLKRGKKRNPVLVGDTVDVDAVVQEVVTMIQRQRL 243
Query: 226 DGVLKNVQIIRLDKDF----TCDKAGIVSKLKDLGALIETKF----GNGDGVILDLGDLK 277
N ++I ++F D+A + +K+K+LG I ++ GV+++LG+L+
Sbjct: 244 ----GNARVISFQREFGDLVDLDRAELAAKIKELGEAIRSELLSPASRSAGVVVNLGNLQ 299
Query: 278 WLVEQQVTSFGVPNSGTLQQQQQVLAEV----VAEIGKLVARFGGGGGRLWLIGTATCET 333
WLVE++ + G ++++ V+ + VAE+ +++ + G R+W+IGTATC T
Sbjct: 300 WLVEERCVA-----PGEQEKRRDVVLDTARAAVAEMARILRQSGEREHRVWVIGTATCAT 354
Query: 334 YLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGS---NGILSSSVESLSPLKSAFQT 390
YL+CQVYHPS+E++WDLQAVPI + P S NG+ + S + S+ T
Sbjct: 355 YLKCQVYHPSLESEWDLQAVPITPRPPPPPPSSLGLSPSVNGVNRGILSSSVEVLSSAMT 414
Query: 391 TAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWL 450
T+A +R S C CL YE+E A ++ + + + QWL
Sbjct: 415 TSAM----------QSRSPSLCSACLDGYERERADMASSPGCGALHATEQP----MSQWL 460
Query: 451 HNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH 494
G +A ++ QD +++ EL+++W D C H
Sbjct: 461 QI-----GTPSSARPPFDRAQDK--AREADELRRRWLDRCAQLH 497
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 154/413 (37%), Positives = 224/413 (54%), Gaps = 43/413 (10%)
Query: 623 KRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAG-SKGDMWLLFMGPDRVGKKKM 681
K L+K L E V WQ EAA+AVA +T+ + G KRRG G ++ D W+LF G D GK KM
Sbjct: 572 KLLVKRLTEAVRWQPEAAAAVAAAITKARSGERKRRGMGPTRADTWVLFSGHDVAGKTKM 631
Query: 682 ASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDID-- 739
A ALS V G + + + L + EP RG+TALD + +A++ NP VI+L+ D
Sbjct: 632 AEALSMSVFGTNAVALRLAG--NGGEPIASCRGRTALDCVADAIRANPLRVIVLDGFDHH 689
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLT 799
+ D VV+ +I RA+E GRLVDS GR+++LG IF++ ++LD+ +
Sbjct: 690 DDDRVVQASILRAVESGRLVDSRGRDVALGEAIFVV---------------MSLDDTRRC 734
Query: 800 S----LASGEWQLRLSIRGKTTKRRASW--LDEE-ERSTKPRKETGS-GLSFDLNKAADV 851
W L L +R KRR LD +R KPRK++ L +L+ D
Sbjct: 735 QEDHQFTDSPWNLELRVRNNARKRRPEPQPLDGAGDRRLKPRKDSPPLHLDLNLSMCEDH 794
Query: 852 GDDKDGS-----HNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDF 906
DD D ++SSDLTV+HE+E+G S + +L +VD+ +VFKPVDF
Sbjct: 795 TDDDDSGGEESRNSSSDLTVEHEQEYGQPAAAAAKFSAPSSFSELTKAVDATVVFKPVDF 854
Query: 907 GRIRRDVTNAITKKF--SSIIGDALSIEILDEALEKLVGGVWLG---RTGLEDWTEKVLV 961
G ++R V++ ++ K ++ G LS+ + D L++L G W T LE W ++VL
Sbjct: 855 GPLKRSVSDVVSAKLGDAAGAGAGLSVHVDDGVLDRLAGAAWTAGESATSLEAWADEVLC 914
Query: 962 PSLHQLKLRLPNNATAATDESATVRLELDDGSGSRSH--GELLPSSIRVVVEG 1012
P++ QLK L N D + TV L +GSG R GE+ P+S+ V V+G
Sbjct: 915 PTIRQLKRSLSAN---DVDGATTVSLSAVEGSGGRRRKDGEVFPTSVTVAVDG 964
>gi|218191719|gb|EEC74146.1| hypothetical protein OsI_09225 [Oryza sativa Indica Group]
Length = 643
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 278/524 (53%), Gaps = 90/524 (17%)
Query: 12 LTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRA 71
LTP+AA+VL+ + A+ASRR H TTPLH AA LL+ P+ LR AC+ S HPL+CRA
Sbjct: 24 LTPDAAAVLSRAAADASRRRHAHTTPLHAAAALLSGPAPLLRDACVAGL-ASPHPLRCRA 82
Query: 72 LELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRR---GCPEQQQQPLLAV 128
L+LCF+VAL+RLPT+ ++ PP+SNAL AALKRA AH RR G E
Sbjct: 83 LDLCFAVALDRLPTSTEHQHHHAAPPLSNALAAALKRAYAHHRRIGSGVVEADDH----- 137
Query: 129 KVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIGLGFRPSSR 188
+V + L+++ILDDPSV+RVMREASFSS AVKA + +SL+ + P S
Sbjct: 138 RVGVPHLVLAILDDPSVARVMREASFSSTAVKAAMLRSLSDPAA------------PDS- 184
Query: 189 NLYMNPRL-----------------------QQAGGVCGGQSEPEMVVRESLAKIESKEL 225
+Y+N R+ ++ + G + + VV+E + I+ + L
Sbjct: 185 GVYVNARVLHRQVSHREEEVNKVVEVLKRGKKRNPVLVGDTVDVDAVVQEVVTMIQRQRL 244
Query: 226 DGVLKNVQIIRLDKDF----TCDKAGIVSKLKDLGALIETKF----GNGDGVILDLGDLK 277
N ++I ++F D+A + +K+K+LG I ++ GV+++LG+L+
Sbjct: 245 ----GNARVISFQREFGDLVDLDRAELAAKIKELGEAIRSELLSPASRSAGVVVNLGNLQ 300
Query: 278 WLVEQQVTSFGVPNSGTLQQQQQVLAEV----VAEIGKLVARFGGGGGRLWLIGTATCET 333
WLVE++ + G ++++ V+ + VAE+ +++ + G R+W+IGTATC T
Sbjct: 301 WLVEERCVA-----PGEQEKRRDVVLDTARAAVAEMARILRQSGEREHRVWVIGTATCAT 355
Query: 334 YLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGS---NGILSSSVESLSPLKSAFQT 390
YL+CQVYHPS+E++WDLQAVPI + P S NG+ + S + S+ T
Sbjct: 356 YLKCQVYHPSLESEWDLQAVPITPRPPPPPPSSLGLSPSVNGVNRGILSSSVEVLSSAMT 415
Query: 391 TAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWL 450
T+A +R S C CL YE+E A ++ + + + QWL
Sbjct: 416 TSAM----------QSRSPSLCSACLDGYERERADMASSPGCGALHATEQP----MSQWL 461
Query: 451 HNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH 494
G +A ++ QD +++ EL+++W D C H
Sbjct: 462 QI-----GTPSSARPPFDRAQDK--AREADELRRRWLDRCAQLH 498
>gi|242073028|ref|XP_002446450.1| hypothetical protein SORBIDRAFT_06g016210 [Sorghum bicolor]
gi|241937633|gb|EES10778.1| hypothetical protein SORBIDRAFT_06g016210 [Sorghum bicolor]
Length = 874
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 175/508 (34%), Positives = 252/508 (49%), Gaps = 71/508 (13%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQ+LT EAA+V+ +++ A RR + Q TPLHVA+ +LA+P+G LR AC++SH
Sbjct: 1 MRAGGCTVQQSLTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLAAPAGLLRAACLRSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGL------------DPPISNALMAALKR 108
SHPLQC+ALELCF+VAL RLP + S L P +SNAL+AA KR
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASAAVASSPLLGGHGHGHHHYYPPSLSNALVAAFKR 117
Query: 109 AQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN 168
AQAHQRRG E QQQP+LAVK+ELEQL++SILDDPSVSRVMREA FSS VKA +EQ++
Sbjct: 118 AQAHQRRGSVESQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSSTQVKANVEQAVC 177
Query: 169 SSCSVSNSSPIGLGFRPS-SRNLYMNPRLQQAGGVCG---------GQSEPEMVVRESLA 218
S+ + + ++ G P+ S + +P Q+A + + E + + LA
Sbjct: 178 STTTTTAATAAAPGKNPNPSSSATTSPTAQEAKAINKLPLPLPLHQARDEDVAAILDCLA 237
Query: 219 KIESKELDGVLKNVQIIRLDKDFTCDK-------------AGIVS--------------- 250
+ + + ++V DK A +VS
Sbjct: 238 SRSKRRVVVIAESVSAAEAMAHAAVDKIKRAEAKHDALRGAQVVSLRVSSFRDMPREETE 297
Query: 251 -KLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEI 309
+L +L L+ + V+L + DLKW E G + V+ E+ A +
Sbjct: 298 RRLGELRCLVRGR--RQQEVVLVVEDLKWAAEFWAGHVQSGRRGYYSSVEHVVTELRALL 355
Query: 310 GKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLG 369
GGG WL+G T + Y+RC+V PS+E+ W LQ + + A + + +
Sbjct: 356 ASGGGGDHGGGSMCWLLGFGTYQAYMRCRVGQPSLESLWGLQTLTVPAGSLVLSL----- 410
Query: 370 SNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMS-CCRQCLQNYEQELAKLSK 428
+ S++ +++ A T P L + +S CC C A L +
Sbjct: 411 TCAFDDSALGTVNQSMKAGSDTDGNAPASCWPLLGGTQLISRCCADCSAARIDTKAALPR 470
Query: 429 EFEKSSSEVKSEVARPLLPQWLHNAKAH 456
F SSS LP WL + + H
Sbjct: 471 PFVSSSS---------TLPSWLQHCRDH 489
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 20/184 (10%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR----GAGSKGDMWLLF 670
K L ++ K L +L ++V WQ+E +A+ V QC+ G KRR A +K + W+ F
Sbjct: 606 KELSAENLKVLCGALEKEVPWQKEIVPEIASAVLQCRSGIAKRRDKSRSADAKEETWMFF 665
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPL----------------GPRRDHEEPEVRVRG 714
+G D GK+K+A L+ LV G+ + + +H +
Sbjct: 666 LGGDADGKEKVARELASLVFGSRNSFVSIRPGGGASASSPPPPAAASSEEHHRSKRPRMA 725
Query: 715 KTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFI 774
L+++ EAV NP VI +ED++ AD + IK A+E G + + G E+ +G+ I I
Sbjct: 726 AAYLERLHEAVSENPHRVIFMEDVERADRDCQLGIKEAIESGVVRNHAGEEVGVGDAIVI 785
Query: 775 LTAD 778
L+ +
Sbjct: 786 LSCE 789
>gi|449446307|ref|XP_004140913.1| PREDICTED: uncharacterized protein LOC101210915 [Cucumis sativus]
Length = 762
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 159/414 (38%), Positives = 230/414 (55%), Gaps = 70/414 (16%)
Query: 1 MRAGLSTIQ-QTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKS 59
MRAG+ TIQ Q L+ EA + + +I A RR H TPLHVA+ +LAS SG LR+AC+
Sbjct: 1 MRAGICTIQLQALSIEAEATVKQAIGLARRRGHAHVTPLHVASAMLASSSGLLRRACLHC 60
Query: 60 HPNSSHPLQCRALELCFSVALERLPTAQQNVSPGL-----DPPISNALMAALKRAQAHQR 114
H SHPLQC+ALELCF+VAL RLPT+ SP +P +SNAL+AA KRAQAHQR
Sbjct: 61 H---SHPLQCKALELCFNVALNRLPTSTP--SPLFGPQYPNPCLSNALVAAFKRAQAHQR 115
Query: 115 RGCPEQQQQ-------PLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSL 167
RG E QQQ P+LA+K+ELEQLIISILDDPSVSRVMREA FSS VK +E+++
Sbjct: 116 RGSIENQQQQQHQQQQPILALKIELEQLIISILDDPSVSRVMREAGFSSTQVKNRVEKAV 175
Query: 168 NSSCSVSNSSPIGLGFRPSSRNLY-------------------------------MNPRL 196
+ +++ + L PS + MN ++
Sbjct: 176 SLEVKITHKTHPNLSINPSQSIPFTQITKIPSTKQQFENNNEEEVTHVLEELSNRMNNKM 235
Query: 197 QQAGG-VCGGQS--EPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFT----CDKAGIV 249
++ + G+S E +VR + + E E+ LK+V+ + L+ F+ K I
Sbjct: 236 RRVSNTIIVGESLGTVETIVRGVMERFEKGEVPKELKHVEFLSLNPLFSLRNVVSKEEIE 295
Query: 250 SKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLA---EVV 306
K+ +L ++++ G VI LGDLKW V+ F N +++++ + E++
Sbjct: 296 QKILELRCIVKSCMGKR--VIFYLGDLKW-----VSEFW-SNYCYGEEERRFYSYVEELI 347
Query: 307 AEIGKLVARFGG-GGGRLWLIGTATCETYLRCQVYHPSMENDWDLQ--AVPIAA 357
EI +LV G+ W++G AT + Y++C+V HPS+++ W L VP+ +
Sbjct: 348 MEIKRLVNNNNSENYGKFWVLGIATFQMYMKCKVGHPSLDSLWSLHPLTVPVGS 401
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 668 LLFMGPDR-VGKKKMASALSELVSGASPIMIPLGPRRDHE----EPEVRVRGKT-----A 717
L F+G D K+K A +++++ G+ MI +G E E ++ RG+
Sbjct: 588 LSFVGNDHDEAKEKAAREIAKIIFGSQSKMICMGLSNFKEGTDGEKSMKKRGRNEMGWNY 647
Query: 718 LDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTA 777
L++ EAV NP V +EDI++ D +K A+E+GR+ S G SL + I I+ +
Sbjct: 648 LERFAEAVNENPHRVFFIEDIEQIDYCSLKGLKEAIEKGRVKLSDGEFCSLKDAIIIINS 707
>gi|357167553|ref|XP_003581219.1| PREDICTED: uncharacterized protein LOC100831510 [Brachypodium
distachyon]
Length = 839
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 159/418 (38%), Positives = 228/418 (54%), Gaps = 72/418 (17%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQ LT EAASV+ +++ A RR + Q TPLHVA+ +LA+P+G LR AC++SH
Sbjct: 1 MRAGGCTVQQALTAEAASVVKQAVSLARRRGNAQVTPLHVASAMLAAPAGLLRAACLRSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPG---------------LDPPISNALMAA 105
SHPLQC+ALELCF+VAL RLP + V+ P +SNAL+AA
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASASAVASSPLLLGGHGHSHGHHYYPPSLSNALVAA 117
Query: 106 LKRAQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ 165
KRAQAHQRRG + QQQP+LAVK+ELEQL++SILDDPSVSRVMREA FSS +KA +EQ
Sbjct: 118 FKRAQAHQRRGSVDTQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSSTQIKANVEQ 177
Query: 166 SLNSSCSVSNSSP----------------------IGLGFRPSSRN---------LYMNP 194
++ SS + +++ P L +R+ L +
Sbjct: 178 TVCSSTAATSAPPRQNPNPSSSTATTTSKPQETTKAKLPLPGQARDEDVAVVLDCLASSA 237
Query: 195 RLQQAGGVCGGQSE-PEMVVRESLAKIESKELDGV--LKNVQIIRLD----KDFTCDKAG 247
R ++ V +E E VR + K++ + L+ Q++ L +D ++A
Sbjct: 238 RSKRRVVVVAESTESAEATVRAVVDKVKKADQSDALPLRGAQVVSLRVSSFRDMPREEAE 297
Query: 248 IVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVA 307
+L +L L++++ G+G V+L + DLKW E +G + VV
Sbjct: 298 --RRLSELRCLVKSR-GHGGHVLLVVEDLKWAAEFW--------AGRRPGYYCAVEHVVT 346
Query: 308 EIGKLVARFGGGGGR---LWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLS 362
E+ L GGGG + WL+G T +TY +C+ PS+E+ W LQ + + A L+
Sbjct: 347 EVRALAC--GGGGEQHALTWLVGFGTYQTYTKCRTGQPSLESLWGLQTLTVPAGCSLA 402
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 122/272 (44%), Gaps = 47/272 (17%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR----GAGSKGDMWLLF 670
K L+ ++ K L +L ++V WQ+E A +A+TV QC+ G KRR +K + W+ F
Sbjct: 579 KELNAENLKVLCVALEKEVPWQKEIAPEIASTVLQCRSGISKRRDKSRSTDAKEETWMFF 638
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLGP-----------RRDHEEPEVRVRGKT--- 716
+G D GK+K+A L+ LV G+ + + P +H R
Sbjct: 639 LGGDVDGKEKVARELANLVFGSHKNFMSIKPAGASSPSASCSTEEHRSKRPRTSAAATGA 698
Query: 717 ALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT 776
L+++ EA+ NP VI+LEDI++AD + IK A++ G + E+ LG+ I IL
Sbjct: 699 CLEQLYEAINENPHRVIILEDIEQADQYSQVAIKEAIDTGVVRSQASDEVGLGDAIVILC 758
Query: 777 ADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKE 836
+ + D K T +K+ + EE S KE
Sbjct: 759 CE-------------SFDAKSRTC-------------SPPSKQIMAEPKEEHTSDNEHKE 792
Query: 837 TGSGLS--FDLNKAADVGDDKDGSHNSSDLTV 866
G+ S FDLN+ + + D N SD+ +
Sbjct: 793 VGASSSSGFDLNRDIE-SEHADHESNPSDVCL 823
>gi|449534098|ref|XP_004174005.1| PREDICTED: chaperone protein ClpB1-like, partial [Cucumis sativus]
Length = 387
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 165/386 (42%), Positives = 228/386 (59%), Gaps = 46/386 (11%)
Query: 9 QQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLAS-PS--GYLRQACIKSHPNSSH 65
QQTLTPEAASVL HS++ A+RR H TPLHVA+TLL+S PS R+AC+KSHP H
Sbjct: 11 QQTLTPEAASVLKHSLSLAARRGHSHVTPLHVASTLLSSKPSTLSLFRRACLKSHP--PH 68
Query: 66 PLQCRALELCFSVALERLPTAQQNVSPGL--DPPISNALMAALKRAQAHQRRGCP----- 118
PLQ RALELCF+VAL RLPT+ SP L P +SNAL+AALKRAQAHQRRG
Sbjct: 69 PLQSRALELCFNVALNRLPTS----SPPLLHSPSLSNALIAALKRAQAHQRRGSSLDHQH 124
Query: 119 EQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS----LNSSCSVS 174
+QQQ PLL +KVEL+ L+ISILDDPSVSRVMREA FSS AVK IE+ + +S + +
Sbjct: 125 QQQQHPLLTIKVELQHLVISILDDPSVSRVMREAGFSSTAVKNNIEEYSSNIITTSTATT 184
Query: 175 NSSPIGLGFRPSSR-------------NLYMNPRLQQAGGVCGGQSEPEMVVRESLAKIE 221
++ L F P S +++ R ++ + G SE VV E + K +
Sbjct: 185 QTTTTPLFFFPGSGSSSGSENASKFVFEVFLGMRKRKNVVLVGDSSEG--VVLEVMRKFK 242
Query: 222 SKELDGVLKNVQIIRLDKDFTCDKAGIVSKL--KDLGALIETKFGNGDGVILDLGDLKWL 279
E+ +K V+ + + + VS+ + L + N GV++ +GDLKW+
Sbjct: 243 MGEVPEEMKGVKFVEF-VPYNNNNNSSVSEFLRRKLEENYDHTENNEGGVVVYVGDLKWI 301
Query: 280 VEQ-QVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQ 338
VE+ ++FGV G + + +++L E G ++W++G A+ + Y+RCQ
Sbjct: 302 VERGSCSNFGV--DGLVGEIERLLLEGFHYNGHNNIN-IKKKIKIWVMGVASYQIYMRCQ 358
Query: 339 VYHPSMENDWDLQAVPIAAKTPLSGM 364
+ PS+E WDL A+P+ P SG+
Sbjct: 359 MRLPSLETQWDLHALPL----PSSGL 380
>gi|449494128|ref|XP_004159457.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101210915
[Cucumis sativus]
Length = 761
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 226/411 (54%), Gaps = 65/411 (15%)
Query: 1 MRAGLSTIQ-QTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKS 59
MRAG+ TIQ Q L+ EA + + +I A RR H TPLHVA+ + AS SG LR+AC+
Sbjct: 1 MRAGICTIQLQALSIEAEATVKQAIGLARRRGHAHVTPLHVASAMPASSSGLLRRACLHC 60
Query: 60 HPNSSHPLQCRALELCFSVALERLPTAQQN--VSPGL-DPPISNALMAALKRAQAHQRRG 116
H SHPLQC+ALELCF+VAL RLPT+ + P +P +SNAL+AA KRAQAHQRRG
Sbjct: 61 H---SHPLQCKALELCFNVALNRLPTSTPSPLFGPQYPNPCLSNALVAAFKRAQAHQRRG 117
Query: 117 CPEQQQQ-------PLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNS 169
E QQQ P+LA+K+ELEQLIISILDDPSVSRVMREA FSS VK +E++++
Sbjct: 118 SIENQQQQQHQQQQPILALKIELEQLIISILDDPSVSRVMREAGFSSTQVKNRVEKAVSL 177
Query: 170 SCSVSNSSPIGLGFRPSSRNLY-------------------------------MNPRLQQ 198
+++ + L PS + MN ++++
Sbjct: 178 EVKITHKTHPNLSINPSQSIPFTQITKIPSTKQQFENNNEEEVTNVLEELSNRMNNKMRR 237
Query: 199 AGG-VCGGQS--EPEMVVRESLAKIESKELDGVLKNVQIIRLDK---DFTCDKAGIVSKL 252
+ G+S E +VR + + E E+ LK+V+ + L K I K+
Sbjct: 238 VSNTIIVGESLGTVETIVRGVMERFEKGEVPKELKHVEFLSLPSVSLRNVVSKEEIEQKI 297
Query: 253 KDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLA---EVVAEI 309
+L ++++ G VI LGDLKW V+ F N +++++ + E++ EI
Sbjct: 298 LELRCIVKSCMGKR--VIFYLGDLKW-----VSEFW-SNYCYGEEERRFYSYVEELIMEI 349
Query: 310 GKLVARFGG-GGGRLWLIGTATCETYLRCQVYHPSMENDWDLQ--AVPIAA 357
+LV G+ W++G AT + Y++C+V HPS+++ W L VP+ +
Sbjct: 350 KRLVNNNNSENYGKFWVLGIATFQMYMKCKVGHPSLDSLWSLHPLTVPVGS 400
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 668 LLFMGPDR-VGKKKMASALSELVSGASPIMIPLGPRRDHE----EPEVRVRGKT-----A 717
L F+G D K+K A +++++ G+ MI +G E E ++ RG+
Sbjct: 587 LSFVGNDHDEAKEKTAREIAKIIFGSQSKMICMGLSNFKEGTDGEKSMKKRGRNEMGWNY 646
Query: 718 LDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTA 777
L++ EAV NP V +EDI++ D +K A+E+GR+ S G SL + I I+ +
Sbjct: 647 LERFAEAVNENPHRVFFIEDIEQIDYCSLKGLKEAIEKGRVKLSDGEFCSLKDAIIIINS 706
>gi|219939389|emb|CAM31939.1| heat shock protein-related [Arabidopsis thaliana]
gi|219939391|emb|CAM31940.1| heat shock protein-related [Arabidopsis thaliana]
Length = 249
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/292 (46%), Positives = 176/292 (60%), Gaps = 60/292 (20%)
Query: 251 KLKDLGALIETKFG----NGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVV 306
++K+L L+ET+ +G GVI+DLGDLKWLVEQ +S P + ++ V V
Sbjct: 8 RIKELDGLLETRLKISDPSGGGVIVDLGDLKWLVEQP-SSTQPPATLAVE----VGRTAV 62
Query: 307 AEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFP 366
E+ +L+ +F G RLW IGTATCETYLRCQVYHPSME DWDLQAV +AAK P SG+FP
Sbjct: 63 VELRRLLEKFEG---RLWFIGTATCETYLRCQVYHPSMETDWDLQAVSVAAKAPASGVFP 119
Query: 367 RLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARR-MSCCRQCLQNYEQELAK 425
RL +N +ES +PLKS PA R + CC QCLQ+YE+ELA+
Sbjct: 120 RLANN------LESFTPLKS----------------FVPANRTLKCCPQCLQSYERELAE 157
Query: 426 LSKEFEKSSSEVKSEVARP-LLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQK 484
+ SS EVKSEVA+P LPQWL AK D + + K +E+QK
Sbjct: 158 ID---SVSSPEVKSEVAQPKQLPQWLLKAKPVDR---------------LPQAKIEEVQK 199
Query: 485 KWNDTCLNQHPNFHPSSLGHERIVPVPLSM---TGLYNSNLLARQPFQPKVQ 533
KWND C+ HP+FH +ERIVP+P+ + T Y+ N+L RQP QPK+Q
Sbjct: 200 KWNDACVRLHPSFHNK---NERIVPIPVPITLTTSPYSPNMLLRQPLQPKLQ 248
>gi|326501854|dbj|BAK06419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1010
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 203/599 (33%), Positives = 286/599 (47%), Gaps = 142/599 (23%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPS----------- 49
MRAG TI Q+LT EAA+VL ++ A RR HGQ TPLHVA LL+S
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLAVGLARRRGHGQVTPLHVAFALLSSACSQPLACAATGP 60
Query: 50 --GYLRQACIKSH---PNSSHPLQCRALELCFSVALERLPTAQQN--------------V 90
G LR+AC++SH P + HPLQCRALELCF+VAL RLPT+ + +
Sbjct: 61 AYGLLRRACLRSHSAVPPAQHPLQCRALELCFNVALNRLPTSGPHSPPPSSAPPFASSLI 120
Query: 91 SPGLDPPISNALMAALKRAQAHQRRGCPEQQQ-------------------QPLLAVKVE 131
P +P +SNAL+AALKRAQA+QRRGC E QQ QP+LAVKVE
Sbjct: 121 QP--NPMLSNALVAALKRAQANQRRGCVELQQPPPSPGPVQHQGAQQQQLQQPVLAVKVE 178
Query: 132 LEQLIISILDDPSVSRVMREASFSSPAVKATIEQ----------------SLNSSCSVSN 175
L+QLIISILDDPSVSRVMREA FSS VK+ +E+ + + +
Sbjct: 179 LDQLIISILDDPSVSRVMREAGFSSATVKSNLEEESALMMSSSSSSPPPPVIPPHFFLDH 238
Query: 176 SSPIGLGFRPSSRNLYMNP---------------------RLQQAGGVCGGQ--SEPEMV 212
SS G GF +P R ++ V G S E V
Sbjct: 239 SSIDGCGFGMWPAQFLTSPPVAVPCCKEDVRAVLEVMVRKRGRRTNPVVVGDSVSMAEAV 298
Query: 213 VRESLAKIESKELDGVLKNVQIIRLDKDFT----CDKAGIVSKLKDLGALIETKFGNGDG 268
E L +E E+ L +++L + +A + +K L ++ G
Sbjct: 299 AGELLRCLERGEVPEELAGAHLLKLQLSYVHVRLMSRADVDAKAAQLRRSVDAV--QRGG 356
Query: 269 VILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLV----ARFGGGGGRLW 324
+++ +GDL+W +++ G ++ + + +VAE+G+L+ AR R+W
Sbjct: 357 LVVYVGDLRWALDEDPAGAGADHTAS---SYSPVEHMVAELGRLLDDLRARC-----RVW 408
Query: 325 LIGTATCETYLRCQVY--HPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLS 382
L+ TA+ +TY+RCQ PS+E+ W LQAV + +SG L N + SSS S+
Sbjct: 409 LVATASYQTYMRCQHRRGQPSLESAWALQAVAVPT---VSGT--GLALNNLHSSSSPSMP 463
Query: 383 PLKSAFQ------TTAAALPRRV-SENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSS 435
K++ Q AA P + SE D +M C +C ++YE+E + + +
Sbjct: 464 KAKASGQQLGKSPMAMAAEPMALGSEQED---KMLLCSECNRSYEREASVVKQ------- 513
Query: 436 EVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH 494
E +E R LP WL D Q ++ + LI EL+ KW+ C H
Sbjct: 514 EAGTEGLRCSLPGWL----VLDNKPPADHQMPHQGKHLI------ELKMKWSRLCTKLH 562
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 96/255 (37%), Gaps = 35/255 (13%)
Query: 644 ATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRR 703
A TV + R G KG + L F G D + + A ++E G++ +I P++
Sbjct: 685 AGTVAEIVEAVASSRSYGRKG-VCLFFKGSDHAAQHRAAVVIAETCCGSADQIIAADPKK 743
Query: 704 DHEEPEVRVRGKTALDKIGEAVKRNPF-----SVILLEDIDEADMVVRGNIKRAMERGRL 758
A D + V R V+++ D++ A + + G +
Sbjct: 744 Y----------SCAEDFCSDVVSRACTLSCSRLVLVIPDVEHAPRHLVDYLVAESRCGCI 793
Query: 759 VDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTK 818
D GRE+ L I I T +F ++ + +L W S K
Sbjct: 794 KDHLGRELKLSGSIIIFTTS------EFANRATDVISLRL-------WT---SSSPADVK 837
Query: 819 RRASWLDEEERSTKPRKETG--SGLSFDLNKAADVGDDKDGSHNSSDLTVDHE-EEHGFT 875
R+A + R +G SG DLN G+D D SD+T + + EHG
Sbjct: 838 RKAEIEPPTRECKRARHGSGSDSGHGIDLNINPCAGNDTDDDAVPSDITHESDTREHGDL 897
Query: 876 NRLLMTPSTSTPSQD 890
+ LL + +T + D
Sbjct: 898 HHLLESVATGVLALD 912
>gi|79538220|ref|NP_568849.2| Clp amino terminal domain-containing protein [Arabidopsis thaliana]
gi|8843815|dbj|BAA97363.1| unnamed protein product [Arabidopsis thaliana]
gi|332009468|gb|AED96851.1| Clp amino terminal domain-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 264/907 (29%), Positives = 383/907 (42%), Gaps = 222/907 (24%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MR G TIQQTLT EAASVL HS+ A RR H Q TPLHVAATLL+S + LR+ACIKSH
Sbjct: 1 MRTGGYTIQQTLTTEAASVLKHSLTLARRRGHAQVTPLHVAATLLSSRTSLLRRACIKSH 60
Query: 61 PNSS-------------------HPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNA 101
P S HPLQCRALELCF+VAL RLPT + G P ++NA
Sbjct: 61 PGFSTNYQFAPSRLQHHHHHNQNHPLQCRALELCFNVALNRLPTVPGPMFHG-QPSLANA 119
Query: 102 LMAALKRAQAHQRRGCPEQQQQP----------LLAVKVELEQLII-------------- 137
L+AALKRAQAHQRRGC EQQQQ LLAVKVELEQL+I
Sbjct: 120 LVAALKRAQAHQRRGCIEQQQQTQTHPQTQQTQLLAVKVELEQLVISILDDPSVSRVMRE 179
Query: 138 ---------SILDDPSVSRVMREAS----FSSPAVKATIEQSLNSSCSVS---------- 174
S ++D SVS V S FSSP +Q NS +
Sbjct: 180 AGFNSTAVKSCVEDCSVSSVFYGGSAVGVFSSPNSPDQQQQHHNSINRLHHYQNPKDFNF 239
Query: 175 -----------------NSSPIGLGFRPSSR---------------NLYMNPRLQQAGGV 202
+ +P+ L S ++ M + ++ V
Sbjct: 240 INPNFPLWQTHFLNQSPDQNPLLLSSSASHHHQQQRLREIDLKLVVDVLMRKKTKKKNPV 299
Query: 203 CGGQS--EPEMVVRESLAKIESKELD--GVLKNVQIIRLDKDFTCDK----AGIVSKLKD 254
G S E V E +AK+E E+D G LK ++ K + +K+
Sbjct: 300 IVGDSISFTEGFVSELMAKLERGEIDQTGELKQTHFVKFHFSPMASKFMRREDVELNIKE 359
Query: 255 LGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQ---QQQVLAEVVAEIGK 311
L + + +G I+ GDLKW V++ + NSG + + L +V EIGK
Sbjct: 360 LRKKVLSLTTSGKNAIIFTGDLKWTVKEITNN----NSGGINEISSSYSPLDHLVEEIGK 415
Query: 312 LVARFGGGGG-------RLWLIGTATCETYLRCQVYHPSMENDWDLQ--AVPIAAKTPLS 362
L+ G ++W++GTA+ +TY+RCQ+ PS+E W L +VP +A LS
Sbjct: 416 LITECNDDGDDDDCKTRKVWVMGTASFQTYMRCQMRQPSLETLWALHPVSVPSSANLGLS 475
Query: 363 GMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQE 422
++G + ++ +++ KS A +S L SCC +C+ ++++E
Sbjct: 476 LH----ATSGHEARNMSTVNATKSLSGYDKAEEEETISHVL------SCCPECVTSFDRE 525
Query: 423 LAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQEL 482
L +K LLP WL ++HD D + K + L
Sbjct: 526 AKSLKANQDK------------LLPSWL---QSHDADSSSQ------------KDELMGL 558
Query: 483 QKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPF--QPKVQLNRNLGD 540
++KWN C H + G LSM G Y L P+ + + +L D
Sbjct: 559 KRKWNRFCETLH-----NQTGQ-------LSMMGNYPYGL----PYGSSHESSKSTSLID 602
Query: 541 TLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEP 600
+L L +P +RA + + R + + + EK G +E
Sbjct: 603 SLGL-------KPNQRATNSIAKFRRQNSCTIEFDLGGNEHEK----------GESINEA 645
Query: 601 PQNKLHESQNDQLQKPL-DPDS-------FKRLLKSLMEKVWWQQEAASAVATTVTQCKL 652
+K +E+ L + L DS L+K+L E + Q +A ++ C
Sbjct: 646 EDDKGNETVTLDLGRSLFRSDSVTDTRLKLSALVKALEESIPRQTVTMRLIAESLMDC-- 703
Query: 653 GNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRV 712
K D W++ G D K+++A +SE V G+ ++ + ++ E +
Sbjct: 704 -------VSKKKDSWIIIEGRDTTAKRRVARTVSESVFGSFESLVHIDLKKKGNESKASP 756
Query: 713 RGKTALDKIGEAVKRNPFSVI-LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
A + +NP V+ L+EDID AD + E R + + I
Sbjct: 757 ATLLAYE------LKNPEKVVFLIEDIDLADSRFLKLLADRFEDKRRIKT---GIDHRQA 807
Query: 772 IFILTAD 778
IFILT +
Sbjct: 808 IFILTKE 814
>gi|413924951|gb|AFW64883.1| hypothetical protein ZEAMMB73_688581 [Zea mays]
Length = 838
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 241/819 (29%), Positives = 352/819 (42%), Gaps = 154/819 (18%)
Query: 29 RRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALERLPTA-- 86
RR H Q TPLHVA+ +L S +G LR AC++SH SHPLQC+ALELCF+VAL RLPTA
Sbjct: 29 RRGHAQVTPLHVASAML-SAAGLLRAACLRSH---SHPLQCKALELCFNVALNRLPTAAA 84
Query: 87 -----QQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQQQ----QPLLAVKVELEQLII 137
+ P +SNAL+AA KRAQAHQRRG + Q QP+LA KV+++QLII
Sbjct: 85 SMFHPHHHAGQQHAPVLSNALVAAFKRAQAHQRRGSVDGAQGQPPQPVLAGKVDIDQLII 144
Query: 138 SILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNS----------------SPIGL 181
SILDDPSVSRVMREA FSS VKA +E+++++S S + SP G
Sbjct: 145 SILDDPSVSRVMREAGFSSSQVKANVEKAVSASSSPEHQQQNTTIPPTSRAHAAISPGGA 204
Query: 182 GFRPSSRNLYMNPRLQQAGGVCGGQSE--PEMVVRESLAKIESKELDG---VLKNVQIIR 236
+ R L + V G+S E+VV+ + ++ EL LKNVQ +
Sbjct: 205 ASGDAMRVLDCMASGSKRSVVVVGESAATAEVVVKAVMNRVSKGELQQRHERLKNVQFVP 264
Query: 237 LD-KDFT-CDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQV----TSFGVP 290
L F + + +K DL AL+ G GV+L L DL + E T
Sbjct: 265 LSAASFQRMPREEVEAKAADLRALVRQGCAAGKGVVLVLEDLAYAAEAWAAVSETRRRSS 324
Query: 291 NSGTLQQQQQVLAEV---VAEIGKLVARFGGGGG----RLWLIGTATCETYLRCQVYHPS 343
SG Q V V E+G LV+ GGGG R WL+G + YL+ + PS
Sbjct: 325 GSGGRDHGQGCYCPVEHAVMEVGSLVSAAAGGGGRGLDRFWLLGFGNNQAYLKSRAGQPS 384
Query: 344 MENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENL 403
+E W+L + + P G+ L N + + P A T A
Sbjct: 385 LEAVWELHPIVV----PDGGLALSLRCNSD-AEQARATRPWPFANGTAATG--------- 430
Query: 404 DPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTA 463
+ EL LS K P +P WL + D +
Sbjct: 431 ----------------DSELITLSC--------AKVAATTPNVPPWLQGYQVQDTTRLAS 466
Query: 464 EQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNL- 522
T + QD W S ++ L+ P S P S++G + +L
Sbjct: 467 RSTSFQMQD--WDPNSNGAAYHTSEITLSFSPQATNS--------PDASSISGSFAPSLM 516
Query: 523 LARQPFQPKVQL---NRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLES 579
++ +P+Q K+ N GD +S+ P R SP S S E
Sbjct: 517 MSSEPWQFKLMQPCPNYGRGDPFARSSDRQQLLP--RPTSPEKS-------YSVSNSSEG 567
Query: 580 APEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEA 639
AP ++E P+ ++N K L +L + ++
Sbjct: 568 AP---------------AAESPKFTELTAEN-----------LKILSNALENRAPRHKDV 601
Query: 640 ASAVATTVTQCKLGNGKRR-----GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASP 694
+ +A+ V QC+ G ++R WLLF G GKK ++ L+ LV G+
Sbjct: 602 VTEIASVVLQCRSGMTRKRRRWCCQEKPSAVTWLLFQGAGNDGKKAVSKELARLVFGSYS 661
Query: 695 IMIPLG------PRRDHEEPEVRVR-------GKTALDKIGEAVKRNPFSVILLEDIDEA 741
+ D E+ ++ G++ + ++ +A+ NP VI+++ +++
Sbjct: 662 KFTAISLSEFTHVHSDSSSGEITLKRQRSLDTGRSYVQRLYDAILENPHRVIMIDGVEQL 721
Query: 742 DMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWL 780
D I+ A+ GR+ G EISLG+ I +L + L
Sbjct: 722 DYESEIGIRNAITNGRIRGCNGDEISLGDTIIVLNCEAL 760
>gi|242061870|ref|XP_002452224.1| hypothetical protein SORBIDRAFT_04g022000 [Sorghum bicolor]
gi|241932055|gb|EES05200.1| hypothetical protein SORBIDRAFT_04g022000 [Sorghum bicolor]
Length = 880
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 216/422 (51%), Gaps = 81/422 (19%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL--------------- 45
MRAG T+QQ L PEAA+V+ +++ A RR + Q TPLHVA+ +L
Sbjct: 1 MRAGGCTVQQALAPEAAAVVKQAVSLARRRGNAQVTPLHVASAMLHQQVVAAATGTGTGP 60
Query: 46 --ASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALERLPTAQQNVSPG-----LDPPI 98
++ +G LR AC++SH SHPLQC+ALELCF+VAL RLP + + G P +
Sbjct: 61 SSSTAAGLLRAACLQSH---SHPLQCKALELCFNVALNRLPASASPLLGGHGHVYYPPSL 117
Query: 99 SNALMAALKRAQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPA 158
SNAL+AA KRAQAHQRRG + QQQP+LAVK+ELEQL+ISILDDPSVSRVMREA FSS
Sbjct: 118 SNALVAAFKRAQAHQRRGSVDTQQQPVLAVKIELEQLVISILDDPSVSRVMREAGFSSTQ 177
Query: 159 VKATIEQSLNS------------SCSVSNSSPIGLGFR---PSSRNLYMN---PRLQQAG 200
VKA +EQ+++S + + N +P PS L ++ R +
Sbjct: 178 VKANVEQAVSSIEANNSASTNTAAAAHQNPNPRAAPHEETMPSKLQLPLDLDQVRDEDVA 237
Query: 201 GV--CGGQSEPE--MVVRESLAKIESKELDGV--------LKNVQIIRLDKDFTCDKAGI 248
V C + MVV E A E+ V L+ Q++ L
Sbjct: 238 VVLDCLASRSKKRVMVVAECAATAEAPTRAAVEKIKRGEALRGAQVVSLR---------- 287
Query: 249 VSKLKDL------GALIETKF-----GNGDGVILDLGDLKWLVE--QQVTSFGVPNSGTL 295
VS+ +DL L+E + G GV+L + DL W E G +
Sbjct: 288 VSRFRDLPRDEAERLLVELRCAVKVGGRAGGVVLVVEDLGWAAEFWAARAESGRARWPSS 347
Query: 296 QQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPI 355
+ VAE+ L R G G +WLIG T ++Y+RC+ PS+E W LQ + +
Sbjct: 348 CCYYCAVEHAVAEVRALACRGGDG---VWLIGYGTYQSYMRCRAGQPSLETLWGLQTLAV 404
Query: 356 AA 357
A
Sbjct: 405 PA 406
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 29/190 (15%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAG---------SKGD 665
K L ++ K L +L ++V WQ E +A+TV QC+ G +RR A +K D
Sbjct: 608 KELSAENLKVLCSALEKEVPWQAEIVPEIASTVLQCRSGMARRRDAAASSSRPPAFAKED 667
Query: 666 MWLLFMGPDRVGKKKMASALSELVSGASPIMIPLG---------PRRDHEEPEVRVRGKT 716
W+LF G D GK ++A L+ LV G+ + + R D + R R +
Sbjct: 668 TWMLFHGGDADGKVRVARELARLVFGSRKSFVSIAGSGTTASSPARSDDSSKQQRKRPRL 727
Query: 717 --------ALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSY--GREI 766
+ + EAV+ NP VIL++D+++ + +I A++RG LV S+ G E
Sbjct: 728 MEEASDHGCHESLYEAVRDNPHRVILVQDVEQGGWRCQRDILEAIQRG-LVRSHAGGDEA 786
Query: 767 SLGNVIFILT 776
+LG+ I +L+
Sbjct: 787 ALGDAIVVLS 796
>gi|125583956|gb|EAZ24887.1| hypothetical protein OsJ_08665 [Oryza sativa Japonica Group]
Length = 966
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 154/413 (37%), Positives = 224/413 (54%), Gaps = 43/413 (10%)
Query: 623 KRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAG-SKGDMWLLFMGPDRVGKKKM 681
K L+K L E V WQ EAA+AVA +T+ + G KRRG G ++ D W+LF G D GK KM
Sbjct: 573 KLLVKRLTEAVRWQPEAAAAVAAAITKARSGERKRRGMGPTRADTWVLFSGHDVAGKTKM 632
Query: 682 ASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDID-- 739
A ALS V G + + + L + EP RG+TALD + +A++ NP VI+L+ D
Sbjct: 633 AEALSMSVFGTNAVALRLAG--NGGEPIASCRGRTALDCVADAIRANPLRVIVLDGFDHH 690
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLT 799
+ D VV+ +I RA+E GRLVDS GR+++LG IF++ ++LD+ +
Sbjct: 691 DDDRVVQASILRAVESGRLVDSRGRDVALGEAIFVV---------------MSLDDTRRC 735
Query: 800 S----LASGEWQLRLSIRGKTTKRRASW--LDEE-ERSTKPRKETGS-GLSFDLNKAADV 851
W L L +R KRR LD +R KPRK++ L +L+ D
Sbjct: 736 QEDHQFTDSPWNLELRVRNNARKRRPEPQPLDGAGDRRLKPRKDSPPLHLDLNLSMCEDH 795
Query: 852 GDDKDGS-----HNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDF 906
DD D ++SSDLTV+HE+E+G S + +L +VD+ +VFKPVDF
Sbjct: 796 TDDDDSGGEESRNSSSDLTVEHEQEYGQPAAAAAKFSAPSSFSELTKAVDATVVFKPVDF 855
Query: 907 GRIRRDVTNAITKKF--SSIIGDALSIEILDEALEKLVGGVWLG---RTGLEDWTEKVLV 961
G ++R V++ ++ K ++ G LS+ + D L++L G W T LE W ++VL
Sbjct: 856 GPLKRSVSDVVSAKLGDAAGAGAGLSVHVDDGVLDRLAGAAWTAGESATSLEAWADEVLC 915
Query: 962 PSLHQLKLRLPNNATAATDESATVRLELDDGSGSRSH--GELLPSSIRVVVEG 1012
P++ QLK L N D + TV L +GSG R GE+ P+S+ V V+G
Sbjct: 916 PTIRQLKRSLSAN---DVDGATTVSLSAVEGSGGRRRKDGEVFPTSVTVAVDG 965
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 153/306 (50%), Gaps = 45/306 (14%)
Query: 204 GGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDF----TCDKAGIVSKLKDLGALI 259
G + + VV+E + I+ + L N ++I ++F D+A + +K+K+LG I
Sbjct: 223 GDTVDVDAVVQEVVTMIQRQRL----GNARVISFQREFGDLVDLDRAELAAKIKELGEAI 278
Query: 260 ETKF----GNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEV----VAEIGK 311
++ GV+++LG+L+WLVE++ + G ++++ V+ + VAE+ +
Sbjct: 279 RSELLSPASRSAGVVVNLGNLQWLVEERCVA-----PGEQEKRRDVVLDTARAAVAEMAR 333
Query: 312 LVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGS- 370
++ + G R+W+IGTATC TYL+CQVYHPS+E++WDLQAVPI + P S
Sbjct: 334 ILRQSGEREHRVWVIGTATCATYLKCQVYHPSLESEWDLQAVPITPRPPPPPPSSLGLSP 393
Query: 371 --NGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSK 428
NG+ + S + S+ TT+A +R S C CL YE+E A ++
Sbjct: 394 SVNGVNRGILSSSVEVLSSAMTTSAM----------QSRSPSLCSACLDGYERERADMAS 443
Query: 429 EFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWND 488
+ + + QWL G +A ++ QD +++ EL+++W D
Sbjct: 444 SPGCGALHATEQP----MSQWLQI-----GTPSSARPPFDRAQDK--AREADELRRRWLD 492
Query: 489 TCLNQH 494
C H
Sbjct: 493 RCAQLH 498
>gi|356532692|ref|XP_003534905.1| PREDICTED: uncharacterized protein LOC100785754 [Glycine max]
Length = 1051
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 142/195 (72%), Gaps = 17/195 (8%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MR+G T+QQTLT EAASVL HS+ A RR H Q TPLHVAATLL + LR+AC+KS
Sbjct: 1 MRSGACTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLTLRASSLRRACLKSQ 60
Query: 61 P----NSSHPLQCRALELCFSVALERLPTAQQNVSPG----LDPPISNALMAALKRAQAH 112
P +S HPLQCRALELCF+VAL RLPT +PG P +SNAL+AALKRAQAH
Sbjct: 61 PQTQTHSHHPLQCRALELCFNVALNRLPT-----TPGPLLHTQPSLSNALIAALKRAQAH 115
Query: 113 QRRGCPEQQQQ----PLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN 168
QRRGC EQQQQ PLL +KVELEQLIISILDDPSVSRVMREA FSS VK+ IE + +
Sbjct: 116 QRRGCIEQQQQQQQPPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTVVKSNIEDTSS 175
Query: 169 SSCSVSNSSPIGLGF 183
S+ SV +S G F
Sbjct: 176 SAPSVFYNSSGGGVF 190
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 171/640 (26%), Positives = 263/640 (41%), Gaps = 109/640 (17%)
Query: 266 GDGVILDLGDLKWLVEQQVTSF--GVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRL 323
G G I +GDLKW VE + G G + +VAEIGKL ++
Sbjct: 339 GGGAIFYVGDLKWTVELGTSEKEEGGDVCG-YNYYYNPVDHLVAEIGKLFCD-SNNTTKV 396
Query: 324 WLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSP 383
WL+ TA+ +TY+RCQ+ P +E W LQAVP+ P G+ L ++ + S + ++S
Sbjct: 397 WLLATASYQTYMRCQMRQPPLETQWSLQAVPV----PSGGLGLSLHASSVHDSKM-TISQ 451
Query: 384 LKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVAR 443
S T + S + +++CC +C +YE+E A+L K +K
Sbjct: 452 NPSNMMET-----KLFSSKKEEQDKLNCCEECASSYEKE-AQLFKPGQKK---------- 495
Query: 444 PLLPQWL--HNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH----PNF 497
LLP WL H +AH D+ +L++KWN C H P
Sbjct: 496 -LLPSWLQSHTTEAHQKDELA------------------QLKRKWNRLCHCLHQSKQPQN 536
Query: 498 HPSSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVS--SQPAE 555
H S+ H + YNS+ P+ P N G ++ +S+ +S P +
Sbjct: 537 HWSNTLHGNYHSSNGNKIYHYNSSY----PWWP------NQGTSVFTDSSSISFADSPPK 586
Query: 556 RAVSPLNSPV-------RTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPP-----QN 603
A S N+ V + S V + P T ++ +K G SSE N
Sbjct: 587 PAYSSNNNIVPRFRRQQSCTIEFNFSDVTQKKPSTTALDSLKGMEGNNSSEVKITLALGN 646
Query: 604 KLHESQNDQLQKPLDPDSFKRL-----LKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR 658
+ Q + + + + L K L E V WQ E ++A + K
Sbjct: 647 STFGGGSGQTVENIITTTDRTLRRAHICKLLQENVPWQSETIPSIAEALVDSK------- 699
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTAL 718
A WLL G D +GK ++A A++E V G+ ++ L +++ + + +
Sbjct: 700 SAKQSSTTWLLLQGTDSIGKTRLARAIAESVFGSVDFLLHLDMLKNNNK-------ENSA 752
Query: 719 DKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT-A 777
D + A+K + V+L+E +D AD R + E + + E S G IFILT
Sbjct: 753 DIVAGALKSHEKVVVLIESLDFADAQFRKFLADGFETAKFGNLSMNEKSSGQAIFILTNG 812
Query: 778 DWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKPR--- 834
D + K + + K + ++ + L S KRRA LD PR
Sbjct: 813 DTRSNEEKKTNNSVM---KLVLQISETKPSLESSSPSLGQKRRAEVLDLFTNVKSPRVEE 869
Query: 835 KETGSGL--------SFDLNKAADVGDDKDGSHN-SSDLT 865
KE G + + DLN AD +D DGS SSDLT
Sbjct: 870 KEEGKKVFSRHSSFNNLDLNMKADEEEDDDGSSPISSDLT 909
>gi|224144311|ref|XP_002325256.1| predicted protein [Populus trichocarpa]
gi|222866690|gb|EEF03821.1| predicted protein [Populus trichocarpa]
Length = 899
Score = 215 bits (548), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 274/972 (28%), Positives = 401/972 (41%), Gaps = 213/972 (21%)
Query: 96 PPISNALMAALKRAQAHQRRGCPEQQQQ-PLLAVKVELEQLIISILDDPSVSRVMREASF 154
P +SNAL+AALKRAQAHQRRGC EQQQQ PLL +KVELEQLI+SILDDPSVSRVMREA F
Sbjct: 6 PSLSNALIAALKRAQAHQRRGCIEQQQQQPLLTIKVELEQLIVSILDDPSVSRVMREAGF 65
Query: 155 SSPAVKATIEQSLNSSCSVSNSSPIGLGFRPSS------RNLYMNPRLQQAGGVCGGQSE 208
SS AVK IE S SS S+ G+ P S + +NP SE
Sbjct: 66 SSTAVKNNIEDSSASSVFQCYSTSGGVFSSPCSPSATETQREVINPTTFWQSHFLTYSSE 125
Query: 209 PEMVVRESLAKIES----------KELDGVL-----KNVQIIRLDKDFTCDKAGIVSKL- 252
+ + K+ S +++ VL KN + + + D G++ +L
Sbjct: 126 QNPALFSAQKKVSSNYFTDSGSVKEDIKLVLEVLLRKNGKNVVIVGDCVSVTEGLIGELM 185
Query: 253 ------------------KDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGT 294
K A I KF V ++L +LK V+ S + +G
Sbjct: 186 GRLERGEVPMQLKQTQFIKFQFAPISLKFMKKQDVEMNLSELKRKVDSLGESGAIIYTGD 245
Query: 295 LQ---QQQQVLAEV---------VAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHP 342
L+ ++ V EV V EIG+L++ + ++WL+ TA+ +TY++CQ+ P
Sbjct: 246 LKWTVEETFVNGEVSVYSPVDHLVREIGRLLSEYSSSNRKVWLMATASYQTYMKCQMRQP 305
Query: 343 SMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSEN 402
S+E W LQAV + P G+ L + I S SL F +++
Sbjct: 306 SLETQWALQAVSV----PSGGLGLSLHPSRIKFSHNPSLVLETKPF----------INDG 351
Query: 403 LDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKT 462
+ R +CC +C NYE+E+ L +K LP WL +
Sbjct: 352 KEEEDRFTCCPECNSNYEKEVHSLKSGQQKH------------LPPWLQPQGTNS----- 394
Query: 463 AEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNL 522
I K + EL++KWN C + H S+L NS L
Sbjct: 395 -----------IQKDEFVELRRKWNRLCHSLHHQGRQSNL----------------NSTL 427
Query: 523 LARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVSP-LNSPVRTDLVLGRSKVLESAP 581
+ Q LG S+ P++ + P NS D L + P
Sbjct: 428 YSNQSL---------LGKNFSFASSY-PWWPSQNSFFPDSNSISFGDSALKPNYSSSCVP 477
Query: 582 -----EKTHIEPVKDFL-GCISSEPPQNKLHESQNDQ---------LQKPLDPDSFK--- 623
+ H+E +F+ G +EP + L +N + L L D K
Sbjct: 478 KFRRQQSCHVEF--NFVNGTQKNEPGEPNLDSLKNTEGKEVKITLALGNSLFSDIGKLEK 535
Query: 624 ----RLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKK 679
L K L E V WQ E ++ + + K ++ D WLL G D +GK+
Sbjct: 536 GRSGHLCKLLKENVPWQSETIPSIVDALVESK---------SNEKDTWLLIQGNDTLGKR 586
Query: 680 KMASALSELVSGASPIMIPLGPR-RDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDI 738
++A A++E V G++ +++ L R RD+E + + A++ V+ +ED+
Sbjct: 587 RLALAIAESVLGSADLLLHLNMRKRDNEVTSYS-------EMLARALRNQEKLVVFVEDV 639
Query: 739 DEADMVVRGNIKRAMERGRLVDSYG-REISLGNVIFILTADWLPDSLKFLSQGITLDEKK 797
D A+ + E G+ +S RE + VIFILT DS+ I D K
Sbjct: 640 DLAETRFLKFLADGFESGKFGESSNRREGNASQVIFILTRG---DSI------IYEDRKM 690
Query: 798 LTSLASGEWQLRLSIRGKTT------KRRASWL-DEEERSTKPRKETGSGLSFDLNKAAD 850
S+ Q+ L I GK+ K ASW DE K S + DLN AD
Sbjct: 691 DDSVI----QMTLKISGKSKSPRVDEKENASWFPDENGNKKKDFSRQSSFNTLDLNLKAD 746
Query: 851 VGDDKDG-----SHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVD 905
D+ +G S SSDLT + T S + LL+ + + VF
Sbjct: 747 EDDESEGKPGEFSPISSDLTRE-------------TSSDQLSPKGLLDMIKNRFVFDRNQ 793
Query: 906 FGRIRRD--VTNAITKKFSSIIGD----ALSIE--ILDEALEKLVGGVWLGRTGLEDWTE 957
I +++ I + + + GD SIE +L E LE G + E W +
Sbjct: 794 AQDIEMTEVLSSKIKRNVNEVFGDQNGVYFSIEERVLGEVLE---GSGSFVNSQFEKWLK 850
Query: 958 KVLVPSLHQLKL 969
+ SL +KL
Sbjct: 851 GIFQTSLKTVKL 862
>gi|356550720|ref|XP_003543732.1| PREDICTED: uncharacterized protein LOC100814376 [Glycine max]
Length = 1008
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/171 (69%), Positives = 131/171 (76%), Gaps = 8/171 (4%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MR+G+ +QQTLT EAASVL HS+ A RR H Q TPLHVAATLL+ LR+AC+KS
Sbjct: 1 MRSGVCALQQTLTAEAASVLKHSLGLARRRGHAQLTPLHVAATLLSLRGSSLRRACLKSQ 60
Query: 61 PN--SSHPLQCRALELCFSVALERLPTAQQNVSPGL--DPPISNALMAALKRAQAHQRRG 116
P+ S HPLQCRALELCF+VAL RL T SP + P +SNAL+AALKRAQAHQRRG
Sbjct: 61 PHQTSHHPLQCRALELCFNVALNRLQTTP---SPLIHTQPSLSNALIAALKRAQAHQRRG 117
Query: 117 CPE-QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS 166
C E QQQQPLL +KVELE LIISILDDPSVSRVMREA FSS AVK IE S
Sbjct: 118 CIEHQQQQPLLTIKVELEHLIISILDDPSVSRVMREAGFSSTAVKNNIEDS 168
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 150/587 (25%), Positives = 254/587 (43%), Gaps = 114/587 (19%)
Query: 210 EMVVRESLAKIESKELDGVLKNVQIIRLD---KDFTCDKAGIVS-KLKDLGALIET-KFG 264
E +V E + ++E E+ LK+ I+ +C K V KL +L +E+ G
Sbjct: 278 EGLVAELMGRLERSEVPDELKSTHFIKFQISHDSLSCMKRDEVEMKLLELKRKVESIASG 337
Query: 265 NGDGVILDLGDLKWLVEQQVTSF-----GVPNSGTLQQQQQVLAEVVAEIGKLVARFG-G 318
G G I +GDLKW V++ SF G PN G + V +V+EIGKL + G
Sbjct: 338 GGGGGIFYIGDLKWTVKE--ASFSEKEEGSPN-GEVSGYNPV-DHLVSEIGKLFSDCGTS 393
Query: 319 GGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPI-AAKTPLSGMFPRLGSNGILSSS 377
++WL+ TA+ +TY+RCQ+ P +E W LQAVPI + LS P + + ++ S
Sbjct: 394 NNAKVWLMATASYQTYMRCQMRQPPLEKQWALQAVPIPSGGLGLSLHAPSVLHSKMIVSH 453
Query: 378 VESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEV 437
+S P + F N++ +++CC +C NYE+E L + +K
Sbjct: 454 NQSHVPETNPFG------------NMEQENKLNCCEECASNYEKEAQFLRPDQKK----- 496
Query: 438 KSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNF 497
+LP WL ++H +D +K +L+ +L++KWN C H +
Sbjct: 497 -------MLPLWL---QSHSTED-------SKKDELV------QLKRKWNRLCHCLHQSK 533
Query: 498 HPS---SLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPA 554
P S H P S++ N+ + P+ Q + + +++P
Sbjct: 534 QPQNQWSWNHNS-YNSPSSISFANNATHGSTSKLVPRFQRQQLCIIEFNFGNKREATEPV 592
Query: 555 ERAVSPLN-SPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQL 613
++ ++ V+T L LG ES +G I+ + L
Sbjct: 593 LDSLESMDGKKVKTILALGNGGSGEST------------VGDIT------------DTTL 628
Query: 614 QKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGP 673
Q+ + K L E V WQ E ++A + K + WLL G
Sbjct: 629 QQA-------HICKLLQENVPWQSETVPSIAEALIDSK------SAKQNNNITWLLVQGN 675
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGE----AVKRNP 729
D +GK+++A A++E V G++ +++ ++ +T++ E A+K +
Sbjct: 676 DTIGKRRLALAIAESVFGSTDVLLHFD----------MLKRETSIAPFSEMLEGALKTHH 725
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT 776
VIL+E++D AD + + E+G+ ++ E S VIFILT
Sbjct: 726 QLVILIENVDFADAQFKKFLSDGFEKGKF-GNFTEENS-SQVIFILT 770
>gi|224097580|ref|XP_002310995.1| predicted protein [Populus trichocarpa]
gi|222850815|gb|EEE88362.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/171 (61%), Positives = 135/171 (78%), Gaps = 6/171 (3%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG+ ++QQTLTPEA S++ +++ A RR H Q TPLHVA+T+LAS +G LR+AC+++H
Sbjct: 1 MRAGICSVQQTLTPEAVSLVKQAVSLARRRGHAQVTPLHVASTMLASSTGLLRRACLQAH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD---PPISNALMAALKRAQAHQRRGC 117
SHPLQC+ALELCF+VAL RLP + + G P +SNAL+AA KRAQAHQRRG
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASTSSALLGPHSSYPSLSNALVAAFKRAQAHQRRGS 117
Query: 118 PEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN 168
E QQQP+LA+K+E+EQLIISILDDPSVSRVMREA FSS VK +EQ+++
Sbjct: 118 IENQQQPILALKIEIEQLIISILDDPSVSRVMREAGFSSTQVKNKVEQAVS 168
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGA----GSKGDMWLLF 670
K + + K L L +KV WQ++ +ATT+ +C+ G KR+G +K + WL F
Sbjct: 472 KEFNDYNLKNLRSGLEKKVPWQKDIIPEIATTILECRSGMRKRKGKLNHIENKAETWLFF 531
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLG------PRRDHEEPEVRVR-----GKTALD 719
+G D GK+K+A L+ LV G+ + +G R D E R G + L+
Sbjct: 532 LGVDFEGKEKIARELARLVFGSQSNFVSIGLSNFSSSRADSTEESKNKRARDELGCSYLE 591
Query: 720 KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++G A+ N V +ED+D D + IK+A+E G + G + L + I + + +
Sbjct: 592 RLGLALNENSHRVFFMEDVDGVDNCSQKGIKQAIENGSVTLPDGENVPLKDAIIVFSCE 650
>gi|357143344|ref|XP_003572888.1| PREDICTED: chaperone protein ClpB-like [Brachypodium distachyon]
Length = 962
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 183/529 (34%), Positives = 277/529 (52%), Gaps = 77/529 (14%)
Query: 13 TPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRAL 72
TP+AA+VL+ + +ASRR H TTPLH AA LL+ P+ LR AC S HPL+CRAL
Sbjct: 26 TPDAAAVLSRAAGDASRRRHAHTTPLHAAAALLSGPAPLLRDACAAGL-ASPHPLRCRAL 84
Query: 73 ELCFSVALERLPTAQQNVS------PGLDPPISNALMAALKRAQAHQRRGCPEQQQQPLL 126
+LCF+VAL+RLPT+ + S L PP+SNAL AALKRA AH RR E
Sbjct: 85 DLCFAVALDRLPTSSPSDSGCFHGGAPLPPPLSNALSAALKRAYAHHRRIGGEAAAGD-- 142
Query: 127 AVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIGLGFRPS 186
+V + L+++ILDDPSV+RVMREASFSS AVKA + +SL+ S S R
Sbjct: 143 DHRVGVPHLVLAILDDPSVARVMREASFSSTAVKAAMLRSLSDPDHSSAFSSTTTSTRLH 202
Query: 187 SRN-----LYMNPRLQQAGGVC--------------GGQSEPEMVVRESLAKIESKELDG 227
R + R ++ V G ++ + VV+E + I+ + L
Sbjct: 203 HRQWQDSSSSSSNRDEEVAKVVQVLKRSNKRNPVLVGDTADVDAVVQEVVTMIQRQRL-- 260
Query: 228 VLKNVQIIRLDKDF-TCDKAGIVSKLKDLG-ALIETKFGNGDGVILDLGDLKWLVEQQV- 284
N ++I L ++ D++ +V K+++LG A+ ++ ++++LG+L+WLVE++
Sbjct: 261 --GNARVISLPQELGDLDRSDLVGKIRELGEAIRSSEAALSQSIVVNLGNLEWLVEERRH 318
Query: 285 TSFG--VPNSGTLQQQQQVL---AEVVAEIGKLVARFGGGGG-------RLWLIGTATCE 332
FG V ++++ VL VAE+ +++ + G G G R+W+IGTATC
Sbjct: 319 VGFGDAVDQEEAAKRREVVLDTARAAVAEMARVLEQCGSGSGEGVGERRRVWMIGTATCA 378
Query: 333 TYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTA 392
TY++CQV+HP++E+ WD+QAVP+A + P + + GILSSSVE L SA TT
Sbjct: 379 TYVKCQVHHPALESQWDIQAVPVAPRPPPTPSPSVGVNRGILSSSVEV---LSSAMSTTG 435
Query: 393 AALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHN 452
A R + C C+ Y++E A++ E + S +WL
Sbjct: 436 ATSTHRSAPG-----GAGMCAACVDGYDRERAEMMPPSEHTMS------------RWLQI 478
Query: 453 AKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSS 501
T D+ +++ EL+++W D C H + P++
Sbjct: 479 G--------TPAPAARPPFDV--AREADELRRRWLDRCAQLHSHARPAA 517
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 153/319 (47%), Gaps = 55/319 (17%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKK 679
D +L + L E V WQ EAA+AVA+T+ + + D W+LF GPD GK+
Sbjct: 569 DETTKLARRLAEAVTWQPEAAAAVASTIAKARRAK-------GAADTWVLFAGPDAEGKR 621
Query: 680 KMASALSELVSGASPIMIPL------GPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVI 733
+MA ALS V GA+ + + L G + E V A D++ EA + NPF V+
Sbjct: 622 RMAEALSVSVFGAAAVTVRLASSCSAGVDANGGESIVSSWTAPARDRVAEAARANPFRVV 681
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWL----PDSLKFLSQ 789
+L+ +D AD +VR + RA E GRL DS G G IF++ + W PD L SQ
Sbjct: 682 VLDGLDHADDLVRAAVARAAESGRLADSRGLG---GGAIFVVMSSWSSSLEPDHLTRSSQ 738
Query: 790 GITLDEKKLTSLASGEWQLRLSIR--GKTTKRRA---SWLD-EEERSTKPRKETGSGLSF 843
+ W L L +R +TT +R LD + R KPRK T L
Sbjct: 739 AAVAPDHS-------SWNLELRVRPLQETTPKRCRPEQPLDINQYRRVKPRK-TPLPLDL 790
Query: 844 DLNKAADVGDDK---------DGSHN-SSDLTVDHEEEH-------GFTNRLLMT-PSTS 885
+L+ D DD+ +GS N SSDLTV+HE E + RLL + P+
Sbjct: 791 NLSMCGDEDDDRVDEGADSGGEGSRNSSSDLTVEHELEPRPSQPGLSASMRLLSSQPNVV 850
Query: 886 TPSQDLLNSVDSAIV-FKP 903
P +L+ +V IV FKP
Sbjct: 851 MP--ELIRAVVDGIVEFKP 867
>gi|224140034|ref|XP_002323392.1| predicted protein [Populus trichocarpa]
gi|222868022|gb|EEF05153.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 132/172 (76%), Gaps = 7/172 (4%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQ LT EAASV+ ++ A RR H Q TPLHVA T+L++ +G LR AC++SH
Sbjct: 1 MRAGGCTVQQALTAEAASVIKQAVTLARRRGHAQVTPLHVANTMLSASTGLLRTACLQSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD----PPISNALMAALKRAQAHQRRG 116
SHPLQC+ALELCF+VAL RLPT+ + G P ISNAL+AA KRAQAHQRRG
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPTSTSSPMIGTPSQQFPSISNALVAAFKRAQAHQRRG 117
Query: 117 CPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN 168
E QQQPLLAVK+ELEQL+ISILDDPSVSRVMREA FSS VK+ +E++++
Sbjct: 118 SIENQQQPLLAVKIELEQLMISILDDPSVSRVMREAGFSSTQVKSNVEEAVS 169
>gi|116310805|emb|CAH67595.1| OSIGBa0092M08.7 [Oryza sativa Indica Group]
gi|218194827|gb|EEC77254.1| hypothetical protein OsI_15844 [Oryza sativa Indica Group]
Length = 876
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 133/187 (71%), Gaps = 16/187 (8%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQ LT EAA+V+ ++ A RR + Q TPLHVA+ +LA P G LR AC++SH
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVTLARRRGNAQVTPLHVASAMLAPPGGLLRAACLRSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGL-------------DPPISNALMAALK 107
SHPLQC+ALELCF+VAL RLP + S L P +SNAL+AA K
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASAAVASSPLLGGHGHGHHGHYYPPSLSNALVAAFK 117
Query: 108 RAQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSL 167
RAQAHQRRG E QQQP+LAVK+ELEQL++SILDDPSVSRVMREA FSS VKA +EQ+
Sbjct: 118 RAQAHQRRGSVETQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSSTQVKANVEQAC 177
Query: 168 NSSCSVS 174
+++ + S
Sbjct: 178 STTTATS 184
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 22/186 (11%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR----GAGSKGDMWLLF 670
K L+ ++ K L +L ++V WQ+E VA+ V QC+ G KRR +K + WL F
Sbjct: 609 KELNAENLKLLCAALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDRSRSTEAKEETWLFF 668
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPL------------GPRRDH---EEPEVRVRGK 715
+G D GK+++A L+ LV G+ + + G DH + P R
Sbjct: 669 LGGDAHGKERVARELAGLVFGSRKSFLSVKLGASSSSPSASGSTEDHHRSKRPRTTTRSS 728
Query: 716 TA---LDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVI 772
+ L+++ +AV NP VIL+ED+++ D + +K A++RG L G E+ +G+ I
Sbjct: 729 ASEAYLERLYDAVSENPHRVILIEDVEQGDHRWQVGVKEAIDRGVLRSQAGDEVGVGDAI 788
Query: 773 FILTAD 778
IL+ +
Sbjct: 789 IILSCE 794
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 16/143 (11%)
Query: 221 ESKELDGVLKNVQIIRLD----KDFTCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDL 276
E+K+ D L+ Q++ L +D ++A +L +L L++++ G V+L + DL
Sbjct: 279 EAKQHDA-LRGAQVVNLRVSSFRDMPREEAE--RRLAELRCLVKSR---GARVLLVVEDL 332
Query: 277 KWLVEQQVTSF-GVPNSGTLQQQQQVLAE-VVAEIGKLVARFGGGGGRLWLIGTATCETY 334
KW + + G G+ E VV E+ L + GG +WL+G T +TY
Sbjct: 333 KWAADFWAAAHTGARRVGSGGGGYYCSVEHVVTEVRALASCDGG----IWLVGFGTYQTY 388
Query: 335 LRCQVYHPSMENDWDLQAVPIAA 357
++C+ HPS+E+ W LQ + + A
Sbjct: 389 MKCRAGHPSLESMWGLQTLAVPA 411
>gi|38344035|emb|CAE01527.2| OJ991214_12.16 [Oryza sativa Japonica Group]
gi|39545713|emb|CAD40931.3| OSJNBa0033G16.3 [Oryza sativa Japonica Group]
Length = 877
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 133/187 (71%), Gaps = 16/187 (8%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQ LT EAA+V+ ++ A RR + Q TPLHVA+ +LA P G LR AC++SH
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVTLARRRGNAQVTPLHVASAMLAPPGGLLRAACLRSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGL-------------DPPISNALMAALK 107
SHPLQC+ALELCF+VAL RLP + S L P +SNAL+AA K
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASAAVASSPLLGGHGHGHHGHYYPPSLSNALVAAFK 117
Query: 108 RAQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSL 167
RAQAHQRRG E QQQP+LAVK+ELEQL++SILDDPSVSRVMREA FSS VKA +EQ+
Sbjct: 118 RAQAHQRRGSVETQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSSTQVKANVEQAC 177
Query: 168 NSSCSVS 174
+++ + S
Sbjct: 178 STTTATS 184
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 24/187 (12%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR----GAGSKGDMWLLF 670
K L+ ++ K L +L ++V WQ+E VA+ V QC+ G KRR +K + WL F
Sbjct: 610 KELNAENLKLLCAALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDRSRSTEAKEETWLFF 669
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPL------------GPRRDHEEPEVRVRGKTA- 717
+G D GK+++A L+ LV G+ + + G DH + R R T
Sbjct: 670 LGGDGHGKERVARELAGLVFGSRKSFLSVKLGASSSSPSASGSTEDHHRSK-RPRTTTTS 728
Query: 718 ------LDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
L+++ +AV NP VIL+ED+++ D + +K A++RG L G E+ +G+
Sbjct: 729 SASEAYLERLYDAVSENPHRVILIEDVEQGDHRWQVGVKEAIDRGVLRSQAGDEVGVGDA 788
Query: 772 IFILTAD 778
I IL+ +
Sbjct: 789 IIILSCE 795
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 221 ESKELDGVLKNVQIIRLD----KDFTCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDL 276
E+K+ D L+ Q++ L +D ++A +L +L L++++ G V+L + DL
Sbjct: 279 EAKQHDA-LRGAQVVSLRVSSFRDMPREEAE--RRLAELRCLVKSR---GARVLLVVEDL 332
Query: 277 KWLVEQQVTSFGVPNSGTLQQQQQVLA---EVVAEIGKLVARFGGGGGRLWLIGTATCET 333
KW + + VV E+ L + GG +WL+G T +T
Sbjct: 333 KWAADFWAAAHAGARRVGSGGGGGYYCSVEHVVTEVRALASCDGG----IWLVGFGTYQT 388
Query: 334 YLRCQVYHPSMENDWDLQAVPIAA 357
Y++C+ HPS+E+ W LQ + + A
Sbjct: 389 YMKCRAGHPSLESMWGLQTLAVPA 412
>gi|326498641|dbj|BAK02306.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 853
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 203/392 (51%), Gaps = 45/392 (11%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL--ASPSGYLRQACIK 58
MRAG +QQ L PEAASV+ ++ A RR H Q TPLHVA +L +P+G LR AC++
Sbjct: 1 MRAGGCAVQQALAPEAASVVRQAVTLARRRGHAQVTPLHVATAMLLPPAPAGLLRAACLR 60
Query: 59 SHPNSSHPLQCRALELCFSVALERLPTA---------------QQNVSPGLDPPISNALM 103
SH SHPLQC+ALELCF+VAL RLPT + P +SNAL+
Sbjct: 61 SH---SHPLQCKALELCFNVALNRLPTCGPAAMFHGGAHMQHHHHHRGAAEAPALSNALV 117
Query: 104 AALKRAQAHQRRGCP----EQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAV 159
AA KRAQAHQRRG +Q P+LA KVELEQLI+SILDDPSVSRVMREA FSS V
Sbjct: 118 AAFKRAQAHQRRGGAGDGVQQTAAPVLAAKVELEQLIVSILDDPSVSRVMREAGFSSSQV 177
Query: 160 KATIEQSLNSSC-------------SVSNSSPIGLGFRPSSRNLYMNPRLQQAGGVCGGQ 206
K +E++++SS S+ S G + R L + V G+
Sbjct: 178 KDNVEKAVSSSSPSLERAANMKTTGSIKESRAKSAGSDDAMRVLECMASGTRRCLVVVGE 237
Query: 207 SEPEMVVRESLAKIESKELDG----VLKNVQIIRLD-KDF-TCDKAGIVSKLKDLGALIE 260
E V+ + K+ EL LK+VQ + L F + + +K DL AL+
Sbjct: 238 GA-EAAVKAVMDKVSKSELHHRHHERLKSVQFVPLSVTSFRHAAREEVDAKTSDLRALVC 296
Query: 261 TKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEI-GKLVARFGGG 319
G GV L + DL + + G G Q + V E+ G + G G
Sbjct: 297 EARAAGKGVALVVEDLAYAADAWHKRRGEHVHGGQSQYYCPVEHAVMEVSGLVSGDSGSG 356
Query: 320 GGRLWLIGTATCETYLRCQVYHPSMENDWDLQ 351
GGR WL+G A+ +++C++ PS+E W +
Sbjct: 357 GGRFWLLGFASRTVFMKCRLGQPSLEAVWGIH 388
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 637 QEAASAVATTVTQCKLGNGKRRGAGS-KGDMWLLFMGPDRVGKKKMASALSELV------ 689
++ A+ VA+ V Q + G ++R WLLF G DR GKK MA L++LV
Sbjct: 615 KDVAAGVASAVLQRRSGMVRQRETPRPSSTTWLLFKGSDRDGKKSMALELAKLVFGSYND 674
Query: 690 ------SGASPI--MIPLGPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEA 741
+G +P+ G R + A + + + NP V++++D+++
Sbjct: 675 FTSISSAGCTPVHSSSSSGERSGKRQRSPDYEHGCA-QRFYDTIHENPRRVVMIDDVEQM 733
Query: 742 DMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWL-----PDSLKFLSQGITLDEK 796
+ IK+A+ GR+ G E SL + I +L+ + S + + Q + DE+
Sbjct: 734 SLGSEIGIKKAIASGRVRGCNGVETSLEDAIIVLSCEAFDSRSRASSPRVIKQKVICDEE 793
>gi|357142495|ref|XP_003572591.1| PREDICTED: uncharacterized protein LOC100844688 [Brachypodium
distachyon]
Length = 841
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 131/174 (75%), Gaps = 7/174 (4%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG+ T+QQ LT EAA+V+ +++ A RR + Q TPLHVA+ +L + +G LR AC++SH
Sbjct: 1 MRAGVCTVQQALTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLHASTGLLRAACLRSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPP-ISNALMAALKRAQAHQRRGCP- 118
SHPLQC+ALELCF+VAL RLP PP +SNAL+AA KRAQAHQRRG
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPAGSPLHGHVYYPPSLSNALVAAFKRAQAHQRRGGSV 117
Query: 119 --EQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSS 170
QQQQP+LAVK+ELEQL+ISILDDPSVSRVMREA FSSP VKA +E ++ SS
Sbjct: 118 DTNQQQQPVLAVKIELEQLVISILDDPSVSRVMREAGFSSPQVKANVEHAVVSS 171
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 22/186 (11%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGA-GSKGDMWLLFMGP 673
K + ++ K L +L ++V WQ+E +A+TV +C+ G KRR A +K + W+LF+G
Sbjct: 575 KEVSAENLKVLCGALEKEVPWQKEIVPEIASTVLRCRSGMAKRRDAMKAKEETWMLFLGG 634
Query: 674 DRVGKKKMASALSELVSGASPIMIPL-----GPRRDHEEPEVRVRGK-------TALDKI 721
D GK ++A L+ LV G+ + + P R E + G + L+++
Sbjct: 635 DTDGKLRVARELAGLVFGSRKSFVSIDADACSPARSDSFVEQKHHGSKRHRSEASHLERL 694
Query: 722 GEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGRE---------ISLGNVI 772
EAV+ NP VIL+E ++ D + IK A+E G + S+ SLG+ I
Sbjct: 695 FEAVRDNPHRVILMEGVERVDRRCQMGIKEAIESGVVRRSHSGAGAGADDDDVASLGDAI 754
Query: 773 FILTAD 778
+L D
Sbjct: 755 VVLCCD 760
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 264 GNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRL 323
G GV+L + DL+W E G ++ + + V E+ L R G G +
Sbjct: 296 GGSRGVVLVVEDLRWAAEFWAGRVGRRSASSSCYYYCAVEHAVGEVRALACRGEGDG--V 353
Query: 324 WLIGTATCETYLRCQVYHPSMENDWDLQAVPI 355
WL+ + + Y+RC+ +PS+E+ W +Q + I
Sbjct: 354 WLVAYGSYQAYMRCRAGNPSLESLWGIQPLAI 385
>gi|225448447|ref|XP_002272110.1| PREDICTED: uncharacterized protein LOC100260392 [Vitis vinifera]
Length = 1105
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 179/537 (33%), Positives = 265/537 (49%), Gaps = 86/537 (16%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +S +Q LTPEAA L+ ++ A RR H QTT LH + +L+ PS LR AC ++
Sbjct: 1 MPTSVSLARQCLTPEAAHALDEAVGVARRRGHAQTTSLHAVSAMLSLPSSLLRDACARAR 60
Query: 61 PNSSHP--LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCP 118
NS++ LQ +ALELC SV+L+R+P+ Q DPP+SN+LMAA+KR+QA+QRR P
Sbjct: 61 -NSAYSARLQFKALELCLSVSLDRVPSTQL----ADDPPVSNSLMAAIKRSQANQRRQ-P 114
Query: 119 EQ----------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATI----E 164
E + +KVEL+ LI+SILDDP VSRV EA F S +K I
Sbjct: 115 ENFQLYQQLQQQSSSSISCIKVELQHLILSILDDPVVSRVFGEAGFRSCDIKLAIVRPLP 174
Query: 165 QSLNSS---------CSVSNSSPIGLGFR-PSSRNLYMNPRLQQAG-------------- 200
Q L S C+ +S P F P S + ++ G
Sbjct: 175 QLLRYSRSRGPPLFLCNFIDSDPSRRSFSFPYSGFFTGDENCKRIGEVLGRGKGRNPLLV 234
Query: 201 GVCGG---QSEPEMVV--RESLAKIESKELDGVLKNVQIIRLDKDFTCDKAGIVSKLKDL 255
GVC QS EMV R ++ +E L + ++R + CD+ I S+ +++
Sbjct: 235 GVCAYDALQSFTEMVEKGRYNILPVEISGLSIICIEKDVLRFFNE-NCDQGLINSRFEEV 293
Query: 256 GALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVAR 315
G L++ G G++++ GDLK +++ S GV + Q + L E+
Sbjct: 294 GVLVQHCLGA--GLVVNFGDLKVFIDRDDASVGVVSYVVSQLTR--LLEI---------- 339
Query: 316 FGGGGGRLWLIG-TATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGIL 374
GG++ L+G ++ ETYL+ +PS+E DWDLQ +PI + + P +G
Sbjct: 340 ---HGGKVRLMGAVSSYETYLKFLNRYPSIEKDWDLQLLPITS------LRPPMGEPYAR 390
Query: 375 SSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSS 434
SS +ES PL F ++ L ++S + R C QC + EQE+A LSK +S
Sbjct: 391 SSLMESFVPL-GGFFSSPCELKGQLSGSYQFTSR---CHQCNEKCEQEVAALSKGGFTAS 446
Query: 435 SEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQD-LIWKQKSQELQKKWNDTC 490
++ +P LP WL A+ G + + KD L+ K LQKKW++ C
Sbjct: 447 V---ADQYQPNLPAWLQMAEL--GKSTAFDVAKAKDDGMLLLNAKIMGLQKKWDNIC 498
Score = 169 bits (429), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 138/465 (29%), Positives = 215/465 (46%), Gaps = 67/465 (14%)
Query: 565 VRTDLVLGR----SKVLESAPEKTHIEPVKDFLGCISSEPPQN----------KLHESQN 610
V TDL LG SK L+ ++TH+ P+ DF SS P N
Sbjct: 626 VTTDLGLGLFYPPSKQLKKDAKQTHLGPLPDF----SSRYPANVDLVNGSISNPSSSCSC 681
Query: 611 DQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLF 670
D FK L ++L E++ WQ EA S ++ T+ C+LGN KR GA KGD+W F
Sbjct: 682 PDSWGQSDQRDFKTLFRALTERIDWQHEAISVISETIAHCRLGNEKRHGASPKGDIWFNF 741
Query: 671 MGPDRVGKKKMASALSELVSG--ASPIMIPLGPR-------RDHEEPE-----VRVRGKT 716
+GPDR KKK+A AL+E++ G S I + L + +H E V+ RGK
Sbjct: 742 VGPDRFSKKKIAVALAEILYGRRESFICVDLSSQDGMIHKSANHGSQEMNGYNVKFRGKN 801
Query: 717 ALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT 776
+D I + + P SV+ LE++D+AD++ R ++ A+ G+ DS+GRE+S+ N F+ T
Sbjct: 802 VVDYIAGELSKKPLSVVFLENVDQADLLARNSLFHAINTGKFCDSHGREVSINNATFVTT 861
Query: 777 ADWLPDSLKFLSQG---ITLDEKKLTSLASGEWQ------------------LRLSIRGK 815
A + K LS G E++++ Q L LSI
Sbjct: 862 ARFRQGD-KVLSSGKEPAKYSEERISRAKGLPMQILIGYSHREDDHDNFGHSLSLSITTN 920
Query: 816 TTKRRASWLDEEERSTKPRKETGSGLSFDLNKAADVGDDKDGSHNSS-DLTVDHEEEHGF 874
+L++ RK GS + + ++ +++ + N+ DL + EE G
Sbjct: 921 NGISNQIFLNK-------RKLVGSSETLEQSETSEMAKRAHKASNTYLDLNLPAEENEG- 972
Query: 875 TNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEIL 934
+ + P+ + Q + +D +VFKP DF + V I+K F IG +EI
Sbjct: 973 QDADHVDPNPRSWLQHFSDQIDETVVFKPFDFDALAEKVLREISKTFHETIGPESLLEIN 1032
Query: 935 DEALEKLVGGVWLG-RTG-LEDWTEKVLVPSLHQLKLRLPNNATA 977
+ +E+++ RTG + DW E+VL + + R N TA
Sbjct: 1033 TKVMEQILAAACSSDRTGAVGDWVEQVLSRGFAEARKRY--NLTA 1075
>gi|224090507|ref|XP_002309005.1| predicted protein [Populus trichocarpa]
gi|222854981|gb|EEE92528.1| predicted protein [Populus trichocarpa]
Length = 896
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 272/975 (27%), Positives = 413/975 (42%), Gaps = 222/975 (22%)
Query: 96 PPISNALMAALKRAQAHQRRGCPEQQQQ---PLLAVKVELEQLIISILDDPSVSRVMREA 152
P +SNAL+AALKRAQAHQRRGC EQQQQ PLL +KVELEQLI+SILDDPSVSRVMREA
Sbjct: 6 PSLSNALIAALKRAQAHQRRGCIEQQQQQQQPLLTIKVELEQLILSILDDPSVSRVMREA 65
Query: 153 SFSSPAVKATIEQSLNSSCSVSNSSPIGLGFRPSS------RNLYMNPRLQQAGGVCGGQ 206
FSS +VK IE S SS S+ G+ P S + +NP
Sbjct: 66 GFSSTSVKNNIEDSSASSVFQCYSTSGGVFSSPCSPSATETQKEVINPTTFWQTHFLNYT 125
Query: 207 SEPEMVVRESLAKIES----------KELDGVL-----KNVQIIRLDKDFTCDKAGIVSK 251
SE V+ K+ S +++ VL KNV I+ D G++++
Sbjct: 126 SEKNPVLLSPQKKVSSNYFTDSGSVKEDIKLVLEVLLRKNVVIV---GDCVPVTEGLIAE 182
Query: 252 LKDLGAL---------------------IETKFGNGDGVILDLGDLKWLVEQQVTSFGVP 290
L +G L + +F + V ++L +LK V+ S +
Sbjct: 183 L--MGRLERGEVPMELKQTRIIEFQFAPVSLRFMKKEDVKMNLSELKRKVDSLGESGAII 240
Query: 291 NSGTLQQ--QQQV----------LAEVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQ 338
+G L+ ++ V + +V EIG+L++ + ++WL+ TA+ +TY++CQ
Sbjct: 241 YTGDLKWAVEETVGNGEVSGYSPVDHLVTEIGRLLSEYSSSNTKVWLMATASYQTYMKCQ 300
Query: 339 VYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILS--SSVESLSPLKSAFQTTAAALP 396
+ PS+E W LQAV + P G+ L ++ I + S V P
Sbjct: 301 MRRPSIEIQWALQAVSV----PSGGLGLSLHASSISNNPSHVLETKPF------------ 344
Query: 397 RRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAH 456
++ + + +CC++C NYE+E+ L KS + LLP WL
Sbjct: 345 --INNGKEEQDKFTCCQECTSNYEKEVQLL-----------KSGQQKHLLP-WLQ----- 385
Query: 457 DGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTG 516
Q N +Q K + EL++KWN C + H S+L + SM G
Sbjct: 386 -------PQGTNSNQ----KDELVELRRKWNRLCHSLHHQGRQSNLNS--TLFNNQSMLG 432
Query: 517 LYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVSPLNSP------------ 564
N + + P+ P ++ +SN +S A+ A+ P S
Sbjct: 433 -KNYSFASSYPWWPS-------QNSFFPDSNSISF--ADSALKPNYSSSNVPKFRRQQSC 482
Query: 565 -VRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQK---PLDPD 620
+ + V G K + PE+ +++ +K+ SE + K+ + + L L+
Sbjct: 483 HIEFNFVNGFQK---NEPEEPNLDSLKN------SEGKEVKITLALGNSLFSDIGKLEKG 533
Query: 621 SFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKK 680
L K L E V WQ E ++ + + + ++ D WLL G D +GK++
Sbjct: 534 RSDHLCKLLKENVPWQSEIIPSIVDAMVESR---------STEKDTWLLIQGNDTLGKRR 584
Query: 681 MASALSELVSGASPIMIPLGPR-RDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDID 739
+A A+SE V G++ +++ L R RD+E + + ++ + +ED+D
Sbjct: 585 LALAISESVLGSADLLLHLNMRKRDNEVTSYS-------EMLARTLRNQEKLAVFVEDVD 637
Query: 740 EADMVVRGNIKRAMERGRLVDSYG-REISLGNVIFILTADWLPDSLKFLSQGITLDEKKL 798
AD+ + E R +S RE + VIFILT DS + D K
Sbjct: 638 LADIQFLKFLADGFETERFGESSNKREGNGSQVIFILTRG---DST------VYEDRKMD 688
Query: 799 TSLASGEWQLRLSIRGKTT------KRRASWL-DEEERSTKPRKETGSGLSFDLNKAADV 851
S+ Q+ L I GK+ K A W DE K S + DLN AD
Sbjct: 689 DSVI----QMTLKISGKSNSPRVDEKENAYWFPDENGNKKKDFSRQSSFNTLDLNLKADE 744
Query: 852 GDDKDG-----SHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVF----- 901
D+ +G S SSDLT + T S + LL+ + + VF
Sbjct: 745 DDESEGKPGEFSPISSDLTRE-------------TSSDQLSPKGLLDMIKNRFVFDRNQA 791
Query: 902 -----KPVDFGRIRRDVTNAITKKFSSIIGDALSIE--ILDEALEKLVGGVWLGRTGLED 954
K V +I+R+V F G SIE +L E LE G + E
Sbjct: 792 QDIEMKGVLSSKIKRNVNEV----FGDQNGVYFSIEERVLGEVLE---GSGSFVNSQFEK 844
Query: 955 WTEKVLVPSLHQLKL 969
W + + SL +KL
Sbjct: 845 WLKDIFQTSLKTVKL 859
>gi|50251982|dbj|BAD27916.1| heat shock protein-related-like [Oryza sativa Japonica Group]
gi|50252658|dbj|BAD28827.1| heat shock protein-related-like [Oryza sativa Japonica Group]
Length = 917
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 136/193 (70%), Gaps = 19/193 (9%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL-----ASPSGYLRQA 55
MRAG T+QQ LT EAA+V+ +++ A RR + Q TPLHVA+ +L A G LR A
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLQAAGAAPAPGLLRAA 60
Query: 56 CIKSHPNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD----------PPISNALMAA 105
C++SH SHPLQC+ALELCF+VAL RLP A SP L P +SNAL+AA
Sbjct: 61 CLRSH---SHPLQCKALELCFNVALNRLP-ASAGASPLLGHGHGVGVYYPPSLSNALVAA 116
Query: 106 LKRAQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ 165
KRAQAHQRRG E QQQP+LAVK+ELEQL+ISILDDPSVSRVMREA FSS VKA +EQ
Sbjct: 117 FKRAQAHQRRGSVETQQQPVLAVKIELEQLVISILDDPSVSRVMREAGFSSTQVKANVEQ 176
Query: 166 SLNSSCSVSNSSP 178
+++SS + + P
Sbjct: 177 AVSSSMEAATTKP 189
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 40/206 (19%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK----RRGAGS---KGDMW 667
K + ++ K L +L ++V WQ+ +A+TV +C+ G RR + K W
Sbjct: 623 KEVSAENLKVLCGALEKEVPWQKVIVPEIASTVLRCRSGMAAPAMARRSSSCSSSKEHTW 682
Query: 668 LLFMGPDRVGKKKMASALSELVSGASPIMIPLG--------------------------- 700
+LF+G D GK ++A L+ LV G+S + +G
Sbjct: 683 MLFLGGDADGKLRVARELASLVFGSSKSFVSIGGAANASPPPSSSSSSPARSSGSTEQPH 742
Query: 701 ----PRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAME-- 754
P + R + L+ + +AV+ NP VIL+E +D AD I+ A+E
Sbjct: 743 RSKRPWAETTTTTTSGRDQDHLEALYDAVRDNPRRVILMERVDRADARCHDGIRDAIERG 802
Query: 755 RGRLVDSYGREISLGNVIFILTADWL 780
R G E LG+ I +L+ + L
Sbjct: 803 VVRSRGGGGEEAFLGDAIVVLSCESL 828
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 261 TKFGNGDGVILDLGDLKWLVEQQVTSFGVPNS---GTLQQQQQVLAEVVAEIGKLVARFG 317
+ G G V+L + DL W E P+S G + VAE+ L G
Sbjct: 299 VRGGGGRAVVLVVEDLAWAAEFWAGRRPPPSSCGAGAGGYYYCAVEHAVAEVRALACGGG 358
Query: 318 GGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAA 357
GGGG +WL+G T +T +RC+ HPS+E W L + + A
Sbjct: 359 GGGGGVWLVGHGTYQTNIRCRTGHPSLETLWGLHTLAVPA 398
>gi|242082468|ref|XP_002441659.1| hypothetical protein SORBIDRAFT_08g000390 [Sorghum bicolor]
gi|241942352|gb|EES15497.1| hypothetical protein SORBIDRAFT_08g000390 [Sorghum bicolor]
Length = 1128
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 233/888 (26%), Positives = 373/888 (42%), Gaps = 191/888 (21%)
Query: 266 GDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGR-LW 324
G G+I +GDLK LV P+ LQ + VVAE+ +L+ + +W
Sbjct: 281 GSGIIFTIGDLKDLV---------PDEADLQDAAR---RVVAEVTRLLETHRAAARQTVW 328
Query: 325 LIG-TATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLS- 382
++G +AT ETYL P ++ DW+LQ +PI A +G P L ++V +LS
Sbjct: 329 VMGWSATYETYLAFLSKFPLVDKDWELQLLPITAVRD-AGPAPGLVPPPAPVTTVPALSM 387
Query: 383 PLKSAFQTTAAALPRRVSENLDPARRMSC-----CRQCLQNYEQELAKLSKEFEKSSSEV 437
P ++F + + + + SC C+QC YEQE+A + + S +
Sbjct: 388 PATTSFVESFVPFGGFMCDTYEAN---SCPQALRCQQCNDRYEQEVATIIR-----GSGI 439
Query: 438 KSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH--- 494
+E + LP LHN G + + + +D ++ K Q L+KKWN+ CL H
Sbjct: 440 TAEAHQEGLPSMLHNGSMM-GPNNGFDALKVRDDHMVLSTKIQNLKKKWNEYCLRLHQGC 498
Query: 495 --------------------------PNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPF 528
PN SL +R V P +++ L+ +N A+
Sbjct: 499 NRINRDPCQLFRHHMDVRVDRERCANPNQSSQSLALQREVIRPSAVSSLH-TNTTAKSIS 557
Query: 529 QPKV--QLNRNLGDTLQL-----------------NSNMVSSQPAERAVSPLNSP-VRTD 568
P + Q+N +L LQ+ +SN + E VSP ++ V TD
Sbjct: 558 APSISTQMNADLALNLQVRQSKSDEPLQDRAVPSQHSNSSNCDNPEDHVSPSSAAAVTTD 617
Query: 569 LVL----GRSKVLESAPEKTHIEPVKDFLGCISSE-------PPQ--------------- 602
L L G S S + H+E + + + + PP
Sbjct: 618 LALATPRGSSSKDSSNALRKHVEDAEGSIQLMPKKVDDLNLKPPHFSAQPYTCFRSSSNW 677
Query: 603 -----NKLH------ESQNDQLQKP-------LDPDSFKRLLKSLMEKVWWQQEAASAVA 644
+ LH S Q Q+P D ++K L++ L + V Q+EA SA+
Sbjct: 678 DQTSPSALHPAASGGASAFGQWQRPSPLAAQTYDLSNYKLLMERLFKAVGRQEEALSAIC 737
Query: 645 TTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRD 704
++ +C+ + RGA K D+W F GPD + K+++A AL+EL+ +S +I L
Sbjct: 738 ASIVRCR-SMERHRGANKKNDIWFSFYGPDSIAKRRVAVALAELMHSSSENLIYLDLSL- 795
Query: 705 HEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSY-G 763
H+ RGK A D I E +++ SVI L+++D+AD +V+ ++ AME GR D + G
Sbjct: 796 HDWGNPNFRGKRATDCISEELRKKRRSVIFLDNVDKADCLVQESLIHAMETGRYKDLHGG 855
Query: 764 REISLGNVIFILTADWL---PDSLKFLSQGITLDEKKLTSLASGEWQL------------ 808
R L + I +L+ + D+ + Q E+K+ + + ++
Sbjct: 856 RVADLNDSIVVLSTRMIQGYQDASLGMEQDNAFSEEKVVAARGHQLKIIVEPGTANIGGD 915
Query: 809 ---------RLSIRGK--------TTKRRASWLDEEER-----STKPRKETGSGLSFDLN 846
R S+R +KR+ D +E+ ST R S + FDLN
Sbjct: 916 SGGKVVVSSRHSLRNSQASLLSSSLSKRKLHISDGQEKTAESPSTSKRLHRTSSIPFDLN 975
Query: 847 KAADVGDDKDGSHNSSDLTVDHEEE-HGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVD 905
D + DG +SS + + G+ +LL SVD +I FKP D
Sbjct: 976 LPGDEAEAHDGDDDSSSSHENSSSDLEGYVG-------------NLLRSVDESINFKPFD 1022
Query: 906 FGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLG----RTGLEDWTEKVLV 961
FG++ D+ + S +G +EI A+E++V W + + W E+V
Sbjct: 1023 FGKLCEDIMQEFSSTMSKTLGSRCRLEIDAVAMEQVVAAAWASDSHEKRPVRTWVEQVFA 1082
Query: 962 PSLHQLKLRLPNNATAATDESATVRL---ELDDGSGSRSHGELLPSSI 1006
SL QLK+R N + S T+RL E + G LPS+I
Sbjct: 1083 RSLEQLKVRCKNLS------SCTLRLVACENEMPVKEDGFGAFLPSTI 1124
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 105/166 (63%), Gaps = 15/166 (9%)
Query: 9 QQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLA-SPSGYLRQACIKSHPNSSHP- 66
+Q L P A + L+ ++A A RR H QTT LH+ A+LLA + + LR A ++ + P
Sbjct: 9 RQCLAPPAVTALDAAVASARRRAHAQTTSLHLIASLLAPTAAPLLRDALARARSAAYSPR 68
Query: 67 LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE------- 119
LQ +AL+LCF+V+L+RLP++ + +PP++N+LMAA+KR+QA+QRR P+
Sbjct: 69 LQLKALDLCFAVSLDRLPSSSNDQH---EPPVANSLMAAIKRSQANQRRN-PDTFHFYHH 124
Query: 120 --QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATI 163
Q AVKV+L L+++ILDDP VSRV +A F S +K I
Sbjct: 125 HHQASASATAVKVDLSHLVLAILDDPLVSRVFADAGFRSNEIKVAI 170
>gi|15233760|ref|NP_194721.1| heat shock protein-relatedlike protein [Arabidopsis thaliana]
gi|4914416|emb|CAB43667.1| putative protein [Arabidopsis thaliana]
gi|7269891|emb|CAB79750.1| putative protein [Arabidopsis thaliana]
gi|332660293|gb|AEE85693.1| heat shock protein-relatedlike protein [Arabidopsis thaliana]
Length = 1017
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 129/178 (72%), Gaps = 17/178 (9%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASP-SGYLRQACIKS 59
MR G T+ QTLTPEAASVL S+ A RR H Q TPLHVA+TLL S S R+AC+KS
Sbjct: 1 MRTGAYTVHQTLTPEAASVLKQSLTLARRRGHSQVTPLHVASTLLTSSRSNLFRRACLKS 60
Query: 60 HPNSS------HP-LQCRALELCFSVALERLPTAQQNVSPGLD--PPISNALMAALKRAQ 110
+P ++ HP L CRALELCF+V+L RLPT N +P P +SNAL+AALKRAQ
Sbjct: 61 NPFTALGRQMAHPSLHCRALELCFNVSLNRLPT---NPNPLFQTQPSLSNALVAALKRAQ 117
Query: 111 AHQRRGCPEQQQQ----PLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIE 164
AHQRRGC EQQQ P LAVKVELEQL++SILDDPSVSRVMREA SS +VK+ IE
Sbjct: 118 AHQRRGCVEQQQSQQNQPFLAVKVELEQLVVSILDDPSVSRVMREAGLSSVSVKSNIE 175
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 132/293 (45%), Gaps = 54/293 (18%)
Query: 210 EMVVRESLAKIESKELDGVLKNVQIIRLDK-----DFTCDKAGIVSKLKDLGALIE--TK 262
E VV + + +IE E+ LK I+ +F K I ++++L I+ T
Sbjct: 286 EGVVAKLMGRIERGEVPDDLKQTHFIKFQFSQVGLNFM-KKEDIEGQVRELKRKIDSFTS 344
Query: 263 FGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGR 322
+G G GVI+ LGDL W V +G + +V EIG+LV + G +
Sbjct: 345 WG-GKGVIVCLGDLDWAV------WG-GGNSASSSNYSAADHLVEEIGRLVYDYSNTGAK 396
Query: 323 LWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRL-GSNGILSSSVESL 381
+WL+GTA+ +TY+RCQ+ P ++ W LQAV I P G+ L S+ ++S V +
Sbjct: 397 VWLLGTASYQTYMRCQMKQPPLDVHWALQAVSI----PSGGLSLTLHASSSEMASQVMEM 452
Query: 382 SPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEV 441
P F+ R E D +++ C +C NYE+E +K F + ++
Sbjct: 453 KP----FRVKEEEEGAREEEEED---KLNFCGECAFNYEKE----AKAFISAQHKI---- 497
Query: 442 ARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH 494
LP WL + H GD+ Q K + L+KKWN C H
Sbjct: 498 ----LPPWL---QPH-GDNNNINQ----------KDELSGLRKKWNRFCQALH 532
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
+LL+ L E + WQ++ ++ + + + KR+ D W+L G D K+++A
Sbjct: 644 KLLEKLHENIPWQKDVLPSIVEAMEE-SVKRSKRK------DAWMLVSGNDVTAKRRLAI 696
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADM 743
L+ + G+ M+ + R + A +++ A+K+ VIL+E +D AD
Sbjct: 697 TLTTSLFGSHENMLKINLRTS--------KASEACEELKNALKKKEEVVILIERVDLADA 748
Query: 744 VVRGNIKRAMERGRLVDSYGREISLGNVIFILT 776
+ E G L G++ +IF+LT
Sbjct: 749 QFMNILVDRFEAGDLDGFQGKK---SQIIFLLT 778
>gi|193870826|gb|ACF23000.1| heat shock-like protein [Arabidopsis thaliana]
Length = 1017
Score = 192 bits (489), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 128/178 (71%), Gaps = 17/178 (9%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASP-SGYLRQACIKS 59
MR G T QTLTPEAASVL S+ A RR H Q TPLHVA+TLL S S R+AC+KS
Sbjct: 1 MRTGAYTAHQTLTPEAASVLKQSLTLARRRGHSQVTPLHVASTLLTSSRSNLFRRACLKS 60
Query: 60 HPNSS------HP-LQCRALELCFSVALERLPTAQQNVSPGLD--PPISNALMAALKRAQ 110
+P ++ HP L CRALELCF+V+L RLPT N +P P +SNAL+AALKRAQ
Sbjct: 61 NPFTALGRQMAHPSLHCRALELCFNVSLNRLPT---NPNPLFQTQPSLSNALVAALKRAQ 117
Query: 111 AHQRRGCPEQQQQ----PLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIE 164
AHQRRGC EQQQ P LAVKVELEQL++SILDDPSVSRVMREA SS +VK+ IE
Sbjct: 118 AHQRRGCVEQQQSQQNQPFLAVKVELEQLVVSILDDPSVSRVMREAGLSSVSVKSNIE 175
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 133/293 (45%), Gaps = 54/293 (18%)
Query: 210 EMVVRESLAKIESKELDGVLKNVQIIRLDK-----DFTCDKAGIVSKLKDLGALIE--TK 262
E VV + + +IE E+ LK I+ +F K I ++++L I+ T
Sbjct: 286 EGVVAKLMGRIERGEVPDDLKQTHFIKFQFSQVGLNFM-KKEDIEGQVRELKRKIDSFTS 344
Query: 263 FGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGR 322
+G G GVI+ LGDL W V +G + +V EIG+LV + G +
Sbjct: 345 WG-GKGVIVCLGDLDWAV------WG-GGNSASSSNYSAADHLVEEIGRLVYDYSNTGAK 396
Query: 323 LWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRL-GSNGILSSSVESL 381
+WL+GTA+ +TY+RCQ+ P ++ W LQAV I P G+ L S+ ++S V +
Sbjct: 397 VWLLGTASYQTYMRCQMKQPPLDVHWALQAVSI----PSGGLSLTLHASSSEMASQVMEM 452
Query: 382 SPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEV 441
P + + A R + D +++ C +C NYE+E +K F + ++
Sbjct: 453 KPFRVKKEKKGA----REEKEED---KLNFCGECAFNYEKE----AKAFISAQHKI---- 497
Query: 442 ARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH 494
LP WL + H GD+ Q K + L+KKWN C H
Sbjct: 498 ----LPPWL---QPH-GDNNNINQ----------KDELSGLRKKWNRFCQALH 532
Score = 46.2 bits (108), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
+LL+ L E + WQ++ ++ + + + KR+ D W+L G D K+++A
Sbjct: 644 KLLEKLHENIPWQKDVLPSIVEAMEE-SVKRSKRK------DAWMLVSGNDVTAKRRLAI 696
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADM 743
L+ + G+ M+ + R + A +++ A+K+ VIL+E +D AD
Sbjct: 697 TLTTSLFGSHENMLKINLRTS--------KASEACEELKNALKKKEEVVILIERVDLADA 748
Query: 744 VVRGNIKRAMERGRLVDSYGREISLGNVIFILT 776
+ E G L G++ +IF+LT
Sbjct: 749 QFMNILVDRFEAGDLDGFQGKK---SQIIFLLT 778
>gi|357479513|ref|XP_003610042.1| Heat shock protein-related-like protein [Medicago truncatula]
gi|355511097|gb|AES92239.1| Heat shock protein-related-like protein [Medicago truncatula]
Length = 820
Score = 192 bits (488), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 123/207 (59%), Positives = 138/207 (66%), Gaps = 15/207 (7%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MR+G +QQTLT EAASVL HS+ A RR H Q TPLHVA TLL ++AC+KSH
Sbjct: 1 MRSGGCALQQTLTAEAASVLKHSLVLARRRGHPQVTPLHVAITLLTLRLSSFKRACLKSH 60
Query: 61 P----NSSHPLQCRALELCFSVALERLPTAQQNVSPGL--DPPISNALMAALKRAQAHQR 114
S HPLQ RALELCF+VAL RLPT SP + P +SNAL+AALKRAQAHQR
Sbjct: 61 QPHHQTSQHPLQSRALELCFNVALNRLPTTP---SPLIHSQPSLSNALIAALKRAQAHQR 117
Query: 115 RGCPEQQQQ---PLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSC 171
RG EQQQQ +L VKVELEQLIISILDDPSVSRVMREA FSS VK +E S + S
Sbjct: 118 RGSIEQQQQHQQTVLTVKVELEQLIISILDDPSVSRVMREAGFSSTLVKNNLEDSFSPSN 177
Query: 172 SV---SNSSPIGLGFRPSSRNLYMNPR 195
SV NSS G+ P S + N R
Sbjct: 178 SVFKCYNSSGGGVFSSPCSPSTSENHR 204
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 119/587 (20%), Positives = 228/587 (38%), Gaps = 117/587 (19%)
Query: 408 RMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTE 467
+++CC +C NYE+E +F + + + K+ LP WL + TE
Sbjct: 288 KLNCCEECASNYEKE-----AQFLRPAGQKKT------LPFWLQ-----------SHGTE 325
Query: 468 NKDQDLIWKQKSQELQKKWNDTCL-----NQHPNFHPSSLGHERIVPVPLSMTGLYNSNL 522
+++D + EL++KWN C QH N S + S + SNL
Sbjct: 326 EQNKDAL-----TELKRKWNRLCHCLHQNKQHQNHWNRSNNNHSSNLNNSSSIISHTSNL 380
Query: 523 ---LARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVSPLNSP-VRTDLVLGRSKVLE 578
RQ ++ N N +++P +++ + V+ L LG +
Sbjct: 381 TPRFRRQQSCSTIEFN--------FNDKRETTKPVFDSIASMEGKEVKISLALGN----D 428
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
+ EK +G I+ Q + K L E V WQ E
Sbjct: 429 DSSEK---------VGNITDTALQQA-------------------HVCKLLQENVPWQSE 460
Query: 639 AASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
+++ L + K WL G D + K+++A ++E V G++ +++
Sbjct: 461 TIPSISKA-----LFDTKSTKLNEISFRWLFLQGNDFISKRRLALGIAESVFGSADLVLQ 515
Query: 699 LGPRRDHEEPEVRVRGKTALDKIGE----AVKRNPFSVILLEDIDEADMVVRGNIKRAME 754
L ++ +T + E A++++ V+L+E++D AD + E
Sbjct: 516 LD----------MLKKETLIAPFSEMLLGALRKHQQLVVLIENVDSADTQFMKFLSDGYE 565
Query: 755 RGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRG 814
+G+ +E +LG VIFILT +++EK ++ + WQ+ +
Sbjct: 566 KGKFETLSNKEGNLGQVIFILTK----------GGSKSIEEKNQKTVINLLWQISETKPN 615
Query: 815 KTTKRRASWLDEEERSTKPR---KETGSGLSFDLNKAADVGDDKDGSHNSSDLTVDHEEE 871
+ +R + D + PR E G +S +K + + N+ DL + +EE
Sbjct: 616 FLSPKRKAEFDLFSKIKNPRIEENEKGLLISEQGSKKEEFLRQSSFNSNTLDLNMKADEE 675
Query: 872 HGFTNRLLMTPSTSTP----SQDLLNSVDSAIVFK-PVDFGRIRRDVT-NAITKKFSSII 925
N+ + + S S+ S L+S+++ F D R + + I F +
Sbjct: 676 EDGENKAIESSSISSDNPLNSNVFLDSIENKFEFNTSSDKDREKTEFFLFKIKGSFEDVC 735
Query: 926 G--DALSIEILDEALEKL-VGGVWLGRTGLEDWTEKVLVPSLHQLKL 969
G + ++ + ++ +E + +G + E W + + SL + L
Sbjct: 736 GKKNVVNFSVDEKVIEDMCMGCCFFTNKMFEKWLKDIFQSSLETVNL 782
>gi|413918032|gb|AFW57964.1| hypothetical protein ZEAMMB73_132211 [Zea mays]
Length = 1030
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 196/615 (31%), Positives = 284/615 (46%), Gaps = 140/615 (22%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL--------------- 45
MRAG TI Q+LT EAA+VL ++A A RR H Q TPLHVA LL
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLALALARRRGHAQVTPLHVAFALLTGPAACAQPLAAFSS 60
Query: 46 ----ASPSGYLRQACIKSHPNSS---------HPLQCRALELCFSVALERLP-----TAQ 87
A P G L++AC++SHP HPLQCRALELCF+VAL RLP +A
Sbjct: 61 PASPAVPYGLLKRACLRSHPAPGPAACHGAPQHPLQCRALELCFNVALNRLPASGPQSAP 120
Query: 88 QNVSPGLDPPI------SNALMAALKRAQAHQRRGCPE------------QQQQPLLAVK 129
+ SP P I SNAL+AALKRAQA+QRRGC E QQQ LLA+K
Sbjct: 121 SSTSPFTSPLIQPSPTLSNALVAALKRAQANQRRGCVELQQPPPPANAPPAQQQALLAIK 180
Query: 130 VELEQLIISILDDPSVSRVMREASFSSPAVKATI-EQSLNSSCSVSNSSPIGLGFRPSSR 188
VELEQL+ISIL+DPSVSRVMREA FSS VK+ + E+S S+S P+ L P
Sbjct: 181 VELEQLVISILEDPSVSRVMREAGFSSATVKSNLEEESALMPPRSSSSPPLPLPPPPIPP 240
Query: 189 NLYMNPRLQQAG--------------------GVCGG---------------QSEP---- 209
+ +++P + +G G C +S P
Sbjct: 241 HFFIDPSIPSSGKAGDRFGLWPAHFLSAAPGPGACNDDVRAVLEVMVRKQERRSNPVVVG 300
Query: 210 ------EMVVRESLAKIESKELDGVLKNVQIIRLDKDFT----CDKAGIVSKLKDLGALI 259
E V E L ++E ++ L +++L + + + ++ +L +
Sbjct: 301 DSVSMAEAVADELLRRLERGDVPEELAGAHLLKLQLSYVHIRLMSRGDVNARASELRRSV 360
Query: 260 E-TKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGG 318
+ + G G+++ +GDL+W ++++ +S + +VAE+G+L+
Sbjct: 361 DAVQLQRGGGLVVYVGDLRWALDEEAHDNHAVSS------YSPVEHMVAELGRLLDDLRA 414
Query: 319 GGGRLWLIGTATCETYLRCQVYHPS-MENDWDLQA--VPIAAKT---------PLSGMFP 366
GR WL+ TA+ +TY+R Q +E+ W LQA VP + T S
Sbjct: 415 SCGRAWLVATASYQTYMRWQQRRRRPLESAWTLQAVVVPTGSGTGLSLNSLGSSSSCSSL 474
Query: 367 RLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKL 426
+ S G+ + S ++ F AA + + +++ C +C +NYE+E A L
Sbjct: 475 QSASAGVPPPMLTSQPLGQNPFPEVGAATAFAGRDEQEDEMQLALCTECTKNYERE-ATL 533
Query: 427 SKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKW 486
K +E +E R LP WL D A+QT ++ + L++KW
Sbjct: 534 VK------AEADAEGPRASLPGWLVL------DRPPADQTPHEKYLTV-------LKRKW 574
Query: 487 NDTCLNQHPNFHPSS 501
+ C H P S
Sbjct: 575 SRLCRKLHLCSDPGS 589
>gi|414882124|tpg|DAA59255.1| TPA: hypothetical protein ZEAMMB73_924088 [Zea mays]
Length = 786
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 201/403 (49%), Gaps = 55/403 (13%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MR+G +QQ L +AA+V+ +++ A RR H Q TPLHVA+ +L G LR AC++S
Sbjct: 1 MRSGGCAVQQKLAGDAAAVMRQAVSLARRRGHAQVTPLHVASAVLLDAGGLLRAACLRSR 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSP-----------GLDPPISNALMAALKRA 109
+SHPLQC+ALELCF+VAL RL TA P +P +SNAL AA KRA
Sbjct: 61 A-TSHPLQCKALELCFNVALNRLATAGGPAPPPAMFEFHIHSGHREPALSNALAAAFKRA 119
Query: 110 QAHQRRG---CPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS 166
Q +QRRG + Q Q +A KVEL+QL+ISILDDPSVSRVMREA FSS VKA +E++
Sbjct: 120 QGNQRRGGGSAADGQHQQNVAAKVELDQLVISILDDPSVSRVMREAGFSSAEVKANVEKA 179
Query: 167 LNSSCSVSNSSPIGLGFRPSSRNLYMNPR-----LQQAG-----------------GVCG 204
++SS SS S + PR +Q G V G
Sbjct: 180 ISSS---EQSSNTASSSSASPSTITKEPRAKADAVQVVGDAARVLDCMASGTNRCVAVVG 236
Query: 205 -GQSEPEMVVRESLAKIESKEL---DGVLKNVQIIRLD-KDFT-CDKAGIVSKLKDLGAL 258
+ E VV+ + K+ EL LKN Q + F + + ++ DL AL
Sbjct: 237 ESAAAAEGVVKAVMDKVSKGELRRQHQRLKNAQFVPFSAASFQRTPREEVEARAGDLCAL 296
Query: 259 IETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQV--LAEVVAEIGKLVARF 316
+ G GV+L L DL + E + + + + + + V E+ LV
Sbjct: 297 VRECCAAGKGVVLVLEDLGYAAEAWTAALWTRSDRSARGLRHYCPVEHAVMELSSLVR-- 354
Query: 317 GGGGGR----LWLIGTATCETYLRCQVYHPSMENDWDLQAVPI 355
GGGGR W++G A Y C+ PS+E L+ V +
Sbjct: 355 -GGGGRDKDMFWVLGFAAYAPYTSCRSGQPSLETVLGLRPVVV 396
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 21/190 (11%)
Query: 617 LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRV 676
L ++ K L ++L +V ++ A +A+ V Q + +G R A WLLF G D
Sbjct: 532 LSAENLKILCRALETRVPRHRDIAPGIASAVLQRR--SGVTRTARPTPATWLLFRGRDND 589
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPE---VRVRGKTALDK------------- 720
GK MA L+ LV G+ + P+ GK +L +
Sbjct: 590 GKMSMARELARLVFGSHDDFTSIAAAASKLAPDHSGSSSPGKHSLKRQRSPPDNEHGGFM 649
Query: 721 --IGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
EA++ NP V+L++ ++ + G I +ME G + G +SL + I +
Sbjct: 650 QTFYEAIRENPHRVVLIDGVEHHSKLQAG-IMGSMENGTVRGCDGGVVSLEDSIVVCCEA 708
Query: 779 WLPDSLKFLS 788
+ SL +S
Sbjct: 709 FESRSLPRVS 718
>gi|218185280|gb|EEC67707.1| hypothetical protein OsI_35183 [Oryza sativa Indica Group]
Length = 845
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 152/410 (37%), Positives = 205/410 (50%), Gaps = 59/410 (14%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG +QQ L EAA V+ ++ A RR H Q TPLHVA+ +L S +G LR AC++SH
Sbjct: 1 MRAGGCAVQQALAAEAAGVVRQAVTLARRRGHAQVTPLHVASAML-SAAGLLRAACLQSH 59
Query: 61 PNSSHPLQCRALELCFSVALERLPTA--------------QQNVSPGLDPPISNALMAAL 106
SHPLQC+ALELCF+VAL RLPTA G P +SNAL+AA
Sbjct: 60 ---SHPLQCKALELCFNVALNRLPTAGPAAAAAIFHHHPHHPGGGGGHHPALSNALVAAF 116
Query: 107 KRAQAHQRRGCPE------QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK 160
KRAQAHQRRG E P++A KVELEQLIISILDDPSVSRVMREA FSS VK
Sbjct: 117 KRAQAHQRRGSVEGQPPPQPPPSPVVASKVELEQLIISILDDPSVSRVMREAGFSSSQVK 176
Query: 161 ATIEQSLNSSC----------SVSNSSPIGLGFR----PSSRNLYMNPRLQQAGGVCGG- 205
A +E+++ +S + S G G R SSR + ++ + G
Sbjct: 177 ANVEKAVVASLDHANAAGGGGGHAGSPNSGHGGRRKESSSSRARVDDDAMRVLDCMASGT 236
Query: 206 --------------QSEPEMVVRESLAKIESKELDGVLKNVQIIRLD--KDFTCDKAGIV 249
V + ++K E LKN+Q + L + +
Sbjct: 237 KRCVVVVGGEGAAAAEAVVKAVMDRVSKAELHHRHERLKNLQFVPLSIASFHGAPREEVE 296
Query: 250 SKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGV---PNSGTLQQQQQVLAEVV 306
+K DL AL+ + G GV+L L DL + + + + T Q + V
Sbjct: 297 AKASDLRALVRSGCAAGKGVVLVLEDLAYAADAWAAASNTRRRAAAATGGQSYCPMEHAV 356
Query: 307 AEIGKLVARFGGGGGRLWLIGTATCETYLRCQVY-HPSMENDWDLQAVPI 355
E+ LV+ GGGG R W++G + + Y++C+ P +E W+L V +
Sbjct: 357 MEVSSLVSGGGGGGERFWVLGFGSYQVYMKCRAAGQPPLEAVWELHPVVV 406
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 617 LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-----RRGAGSKGDMWLLFM 671
L+ ++ K L +L +V +A+TV QC+ G K + + WLLF
Sbjct: 582 LNAENLKILCNALESRVPQHSNIVPDIASTVLQCRSGMKKMKLRHKEIIKASSTTWLLFQ 641
Query: 672 GPDRVGKKKMASALSELVSGASPIMIPLG------PRRDHEEPEVRVRGKTALD------ 719
G D GKK MA L++LV G+S + P D E+ ++ + + D
Sbjct: 642 GRDVDGKKAMAQELAKLVFGSSTEFSSISFDELTSPYSDSSSGELTLKRQRSADSNEHSF 701
Query: 720 --KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTA 777
++ E V +NP VI++ DI++ D +IK+A+ GR+ G E+ + I +L+
Sbjct: 702 AQRLCEIVSKNPHQVIVINDIEQLDQDSEISIKKAIANGRMRGCTGEEVDFEDAIIVLSY 761
Query: 778 D 778
+
Sbjct: 762 E 762
>gi|297736601|emb|CBI25472.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 171/520 (32%), Positives = 256/520 (49%), Gaps = 78/520 (15%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +S +Q LTPEAA L+ ++ A RR H QTT LH + +L+ PS LR AC ++
Sbjct: 1 MPTSVSLARQCLTPEAAHALDEAVGVARRRGHAQTTSLHAVSAMLSLPSSLLRDACARAR 60
Query: 61 PNSSHP--LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCP 118
NS++ LQ +ALELC SV+L+R+P+ Q DPP+SN+LMAA+KR+QA+QRR P
Sbjct: 61 -NSAYSARLQFKALELCLSVSLDRVPSTQL----ADDPPVSNSLMAAIKRSQANQRRQ-P 114
Query: 119 EQ----------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATI----E 164
E + +KVEL+ LI+SILDDP VSRV EA F S +K I
Sbjct: 115 ENFQLYQQLQQQSSSSISCIKVELQHLILSILDDPVVSRVFGEAGFRSCDIKLAIVRPLP 174
Query: 165 QSLNSS---------CSVSNSSPIGLGFR-PSSRNLYMNPRLQQAGGVCG-GQSEPEMVV 213
Q L S C+ +S P F P S + ++ G V G G+ ++V
Sbjct: 175 QLLRYSRSRGPPLFLCNFIDSDPSRRSFSFPYSGFFTGDENCKRIGEVLGRGKGRNPLLV 234
Query: 214 RESLAKIESKELDGVLKN-VQIIRLDKDFTCDKAGIVSKLKDLGALIETKFGNGDGVILD 272
+ V K I+ ++ +S +++G L++ G G++++
Sbjct: 235 GVCAYDALQSFTEMVEKGRYNILPVE----------ISGFEEVGVLVQHCLGA--GLVVN 282
Query: 273 LGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIG-TATC 331
GDLK +++ S GV + Q + L E+ GG++ L+G ++
Sbjct: 283 FGDLKVFIDRDDASVGVVSYVVSQLTR--LLEI-------------HGGKVRLMGAVSSY 327
Query: 332 ETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTT 391
ETYL+ +PS+E DWDLQ +PI + + P +G SS +ES PL F ++
Sbjct: 328 ETYLKFLNRYPSIEKDWDLQLLPITS------LRPPMGEPYARSSLMESFVPL-GGFFSS 380
Query: 392 AAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLH 451
L ++S + R C QC + EQE+A LSK +S ++ +P LP WL
Sbjct: 381 PCELKGQLSGSYQFTSR---CHQCNEKCEQEVAALSKGGFTASV---ADQYQPNLPAWLQ 434
Query: 452 NAKAHDGDDKTAEQTENKDQD-LIWKQKSQELQKKWNDTC 490
A+ G + + KD L+ K LQKKW++ C
Sbjct: 435 MAEL--GKSTAFDVAKAKDDGMLLLNAKIMGLQKKWDNIC 472
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 18/141 (12%)
Query: 565 VRTDLVLGR----SKVLESAPEKTHIEPVKDFLGCISSEPPQN----------KLHESQN 610
V TDL LG SK L+ ++TH+ P+ DF SS P N
Sbjct: 600 VTTDLGLGLFYPPSKQLKKDAKQTHLGPLPDF----SSRYPANVDLVNGSISNPSSSCSC 655
Query: 611 DQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLF 670
D FK L ++L E++ WQ EA S ++ T+ C+LGN KR GA KGD+W F
Sbjct: 656 PDSWGQSDQRDFKTLFRALTERIDWQHEAISVISETIAHCRLGNEKRHGASPKGDIWFNF 715
Query: 671 MGPDRVGKKKMASALSELVSG 691
+GPDR KKK+A AL+E++ G
Sbjct: 716 VGPDRFSKKKIAVALAEILYG 736
>gi|413924950|gb|AFW64882.1| hypothetical protein ZEAMMB73_688581 [Zea mays]
Length = 835
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 149/372 (40%), Positives = 196/372 (52%), Gaps = 49/372 (13%)
Query: 29 RRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALERLPTA-- 86
RR H Q TPLHVA+ +L S +G LR AC++SH SHPLQC+ALELCF+VAL RLPTA
Sbjct: 29 RRGHAQVTPLHVASAML-SAAGLLRAACLRSH---SHPLQCKALELCFNVALNRLPTAAA 84
Query: 87 -----QQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQQQ----QPLLAVKVELEQLII 137
+ P +SNAL+AA KRAQAHQRRG + Q QP+LA KV+++QLII
Sbjct: 85 SMFHPHHHAGQQHAPVLSNALVAAFKRAQAHQRRGSVDGAQGQPPQPVLAGKVDIDQLII 144
Query: 138 SILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNS----------------SPIGL 181
SILDDPSVSRVMREA FSS VKA +E+++++S S + SP G
Sbjct: 145 SILDDPSVSRVMREAGFSSSQVKANVEKAVSASSSPEHQQQNTTIPPTSRAHAAISPGGA 204
Query: 182 GFRPSSRNLYMNPRLQQAGGVCGGQSE--PEMVVRESLAKIESKELDG---VLKNVQIIR 236
+ R L + V G+S E+VV+ + ++ EL LKNVQ +
Sbjct: 205 ASGDAMRVLDCMASGSKRSVVVVGESAATAEVVVKAVMNRVSKGELQQRHERLKNVQFVP 264
Query: 237 LD-KDFT-CDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQV----TSFGVP 290
L F + + +K DL AL+ G GV+L L DL + E T
Sbjct: 265 LSAASFQRMPREEVEAKAADLRALVRQGCAAGKGVVLVLEDLAYAAEAWAAVSETRRRSS 324
Query: 291 NSGTLQQQQQVLAEV---VAEIGKLVARFGGGGG----RLWLIGTATCETYLRCQVYHPS 343
SG Q V V E+G LV+ GGGG R WL+G + YL+ + PS
Sbjct: 325 GSGGRDHGQGCYCPVEHAVMEVGSLVSAAAGGGGRGLDRFWLLGFGNNQAYLKSRAGQPS 384
Query: 344 MENDWDLQAVPI 355
+E W+L + +
Sbjct: 385 LEAVWELHPIVV 396
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 18/182 (9%)
Query: 617 LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR-----GAGSKGDMWLLFM 671
L ++ K L +L + ++ + +A+ V QC+ G ++R WLLF
Sbjct: 576 LTAENLKILSNALENRAPRHKDVVTEIASVVLQCRSGMTRKRRRWCCQEKPSAVTWLLFQ 635
Query: 672 GPDRVGKKKMASALSELVSGASPIMIPLG------PRRDHEEPEVRVR-------GKTAL 718
G GKK ++ L+ LV G+ + D E+ ++ G++ +
Sbjct: 636 GAGNDGKKAVSKELARLVFGSYSKFTAISLSEFTHVHSDSSSGEITLKRQRSLDTGRSYV 695
Query: 719 DKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++ +A+ NP VI+++ +++ D I+ A+ GR+ G EISLG+ I +L +
Sbjct: 696 QRLYDAILENPHRVIMIDGVEQLDYESEIGIRNAITNGRIRGCNGDEISLGDTIIVLNCE 755
Query: 779 WL 780
L
Sbjct: 756 AL 757
>gi|62701870|gb|AAX92943.1| transposon protein, putative, mutator sub-class [Oryza sativa
Japonica Group]
gi|77548749|gb|ABA91546.1| transposon protein, putative, Mutator sub-class, expressed [Oryza
sativa Japonica Group]
gi|222615545|gb|EEE51677.1| hypothetical protein OsJ_33029 [Oryza sativa Japonica Group]
Length = 845
Score = 186 bits (472), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 151/410 (36%), Positives = 203/410 (49%), Gaps = 59/410 (14%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG +QQ L EAA V+ ++ A RR H Q TPLHVA+ +L S +G LR AC++SH
Sbjct: 1 MRAGGCAVQQALAAEAAGVVRQAVTLARRRGHAQVTPLHVASAML-SAAGLLRAACLQSH 59
Query: 61 PNSSHPLQCRALELCFSVALERLPTA--------------QQNVSPGLDPPISNALMAAL 106
SHPLQC+ALELCF+VAL RLPTA G P +SNAL+AA
Sbjct: 60 ---SHPLQCKALELCFNVALNRLPTAGPAAAAAIFHHHPHHPGGGGGHHPALSNALVAAF 116
Query: 107 KRAQAHQRRGCPE------QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK 160
KRAQAHQRRG E P++A KVELEQLIISILDDPSVSRVMREA FSS VK
Sbjct: 117 KRAQAHQRRGSVEGQPPPQPPPSPVVASKVELEQLIISILDDPSVSRVMREAGFSSSQVK 176
Query: 161 ATIEQSLNSSC----------SVSNSSPIGLGFR----PSSRNLYMNPRLQQAGGVCGG- 205
A +E+++ +S + S G G R SSR + ++ + G
Sbjct: 177 ANVEKAVVASLDHANAAGGGGGHAGSPNSGHGGRRKESSSSRARVDDDAMRVLDCMASGT 236
Query: 206 --------------QSEPEMVVRESLAKIESKELDGVLKNVQIIRLD--KDFTCDKAGIV 249
V + ++K E LKN+Q + L + +
Sbjct: 237 KRCVVVVGGEGAAAAEAVVKAVMDRVSKAELHHRHERLKNLQFVPLSIASFHGAPREEVE 296
Query: 250 SKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQV---LAEVV 306
+K DL AL+ + G GV+L L DL + + + Q + V
Sbjct: 297 AKASDLRALVRSGCAAGKGVVLVLEDLAYAADAWAAASNTRRRAAAAAGGQSYCPMEHAV 356
Query: 307 AEIGKLVARFGGGGGRLWLIGTATCETYLRCQVY-HPSMENDWDLQAVPI 355
E+ LV+ GGGG R W++G + + Y++C+ P +E W+L V +
Sbjct: 357 MEVSSLVSGGGGGGERFWVLGFGSYQVYMKCRAAGQPPLEAVWELHPVVV 406
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 617 LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-----RRGAGSKGDMWLLFM 671
L+ ++ K L +L +V +A+TV QC+ G K + + WLLF
Sbjct: 582 LNAENLKILCNALESRVPQHSNIVPDIASTVLQCRSGMKKMKLRHKEIIKASSTTWLLFQ 641
Query: 672 GPDRVGKKKMASALSELVSGASPIMIPLG------PRRDHEEPEVRVRGKTALD------ 719
G D GKK MA L++LV G+S + P D E+ ++ + + D
Sbjct: 642 GRDVDGKKAMAQELAKLVFGSSTEFSSISFDELTSPYSDSSSGELTLKRQRSADSNEHSF 701
Query: 720 --KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTA 777
++ E V +NP VI++ DI++ D +IK+A+ GR+ G E+ + I +L+
Sbjct: 702 AQRLCEIVSKNPHQVIVINDIEQLDQDSEISIKKAIANGRMRGCTGEEVDFEDAIIVLSY 761
Query: 778 D 778
+
Sbjct: 762 E 762
>gi|413915851|gb|AFW55783.1| hypothetical protein ZEAMMB73_843327 [Zea mays]
Length = 1120
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 234/893 (26%), Positives = 369/893 (41%), Gaps = 211/893 (23%)
Query: 268 GVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGR---LW 324
G+I +GDLK LV P+ LQ + VVAE+ +L+ + +W
Sbjct: 281 GLIFSIGDLKDLV---------PDEADLQDAAR---RVVAEVTRLLETHRPAARQTQTVW 328
Query: 325 LIG-TATCETYLRCQVYHPSMENDWDLQAVPIAA------------KTPLSGMFPRLGSN 371
++G +AT ETYL P ++ DW+LQ +PI A P S
Sbjct: 329 VMGWSATYETYLAFLSKFPLVDKDWELQLLPITAVRDAGPAAGLVPPPPAPATTVAALSM 388
Query: 372 GILSSSVESLSPLKSAFQTTAAALPRRVSENLDP-ARRMSCCRQCLQNYEQELAKLSKEF 430
+S ES P T A ++ N P A R C+ C YEQE+A + +
Sbjct: 389 PATTSFAESFVPFGGLLCDTYEA--NSLTTNFCPQALR---CQHCNDRYEQEVASIIR-- 441
Query: 431 EKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTC 490
S V ++ + LP L N G + + + +D ++ K L+KKWN+ C
Sbjct: 442 ---GSGVTADAHQEGLPSLLQNGGMM-GSNNEFDAVKVRDDQMVLSTKILNLEKKWNEYC 497
Query: 491 LNQH-----------------------------PNFHPSSLGHERIVPVPLSMTGLYNSN 521
+ H PN ++ +R + P +++ Y +N
Sbjct: 498 VRLHQGCNRINRDPCQLFPHHIGVRVDRERCANPNQSAQTIALQRDIIKPCALSSPY-TN 556
Query: 522 LLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVSPLN---------------SPVR 566
+ A+ P Q+N +L LQ+ + S++P + V P +PV
Sbjct: 557 ITAKSISAPD-QINADLVLNLQVRQSR-SNEPLQSGVVPFQHINSSNYNKPEESSAAPVT 614
Query: 567 TDLVLGR-------------SKVLESAPEKTHIEPVKDFLGCISSEPPQ----------- 602
TDLVL K +E E + P K + ++ +PP
Sbjct: 615 TDLVLATPRGSSFKDSSSALCKRVEDIEETIQLMPNK--VDDLNLKPPHLSIQPYTCSKS 672
Query: 603 ----------NKLHE------SQNDQLQKP-------LDPDSFKRLLKSLMEKVWWQQEA 639
+ LH S Q Q+P D ++K L++ L + V Q+EA
Sbjct: 673 SSSNWEQTSPSALHSTSLGGTSAFGQWQRPSPLATQSFDLSNYKLLMEHLFKVVGRQEEA 732
Query: 640 ASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPL 699
SA+ ++ +C+ +RRGA K D+W F GPD + K+++ AL+EL+ G+S +I L
Sbjct: 733 LSAICASIVRCR-SMERRRGANKKNDIWFSFYGPDSIAKRRVGVALAELMHGSSGNLIYL 791
Query: 700 G-PRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
D P RGK A D I E +++ SVI L++ID+AD +V+ ++ AME GR
Sbjct: 792 DLSLNDWGNPS--FRGKRATDCIFEELRKKRRSVIFLDNIDKADCLVQESLIHAMETGRY 849
Query: 759 VDSY-GREISLGNVIFILTADWL---PDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRG 814
D + GR L + I +L+ + D+ + +G E+K ++A+ QL++ +
Sbjct: 850 KDLHGGRVTDLNDSIVVLSTRMIQGCQDASLGVEEGNAFSEEK--AVAARGHQLKIIVEP 907
Query: 815 KTT-------------------------KRRASWLD-----EEERSTKPRKETGSGLSFD 844
TT KR+ D EE ST R S + FD
Sbjct: 908 GTTNIGGGNVVVSSRHSLGSSEASSYSSKRKLHISDGQEKTEESASTSKRLHRTSSIPFD 967
Query: 845 LNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPV 904
LN GDD++ + D E+ + +LL VD +I FKP
Sbjct: 968 LNLP---GDDEEAHDDGDDDKSSGSHENYLEGSV----------GNLLRWVDGSINFKPF 1014
Query: 905 DFGRIRRDVTNAITKKFSSIIGD-ALSIEILDEALEKLVGGVWLG------RTGLEDWTE 957
DFG++ D+ + S I+G +EI A+E++V W + + W E
Sbjct: 1015 DFGKLCEDILQEFSNTTSKILGTRGCRLEIDAGAMEQVVAAAWASDSHENEKRPVRTWVE 1074
Query: 958 KVLVPSLHQLKLRLPNNATAATDESATVRL---EL-DDGSGSRSHGELLPSSI 1006
+V SL Q+K+R N + S T+RL E+ +DG G+ LLPS I
Sbjct: 1075 QVFGRSLEQVKMRCENLS------SCTLRLVSCEVKEDGFGA-----LLPSRI 1116
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 107/167 (64%), Gaps = 13/167 (7%)
Query: 9 QQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLA-SPSGYLRQACIKSHPNSSHP- 66
+Q L+P A + L+ ++A A RR H QTT LH+ A+LLA + + LR A ++ + P
Sbjct: 9 RQCLSPPAVTALDAAVASARRRAHAQTTSLHLIASLLAPTAAPLLRDALARARSAAYSPR 68
Query: 67 LQCRALELCFSVALERLPTAQQNVSP--GLDPPISNALMAALKRAQAHQRRGCPE----- 119
LQ +AL+LCF+V+L+RLP+ + S +PP++N+LMAA+KR+QA+QRR P+
Sbjct: 69 LQLKALDLCFAVSLDRLPSTPTSASTPTSHEPPVANSLMAAIKRSQANQRRN-PDTFHFY 127
Query: 120 -QQQQPLL--AVKVELEQLIISILDDPSVSRVMREASFSSPAVKATI 163
Q P A+KV+L L+++ILDDP VSRV +A F S +K I
Sbjct: 128 HHQAAPTSPNAIKVDLSHLVLAILDDPLVSRVFADAGFRSNEIKVAI 174
>gi|125578208|gb|EAZ19354.1| hypothetical protein OsJ_34905 [Oryza sativa Japonica Group]
Length = 892
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 224/864 (25%), Positives = 370/864 (42%), Gaps = 189/864 (21%)
Query: 268 GVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIG 327
G+I+ +GDLK LV + + Q+ VVAE+ + V GR+W++G
Sbjct: 47 GLIISIGDLKQLVPDEDA-----------EAQENGRRVVAEVTR-VLEAHSKVGRVWVMG 94
Query: 328 -TATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGIL--SSSVESLS-- 382
+AT ETYL P ++ DWDLQ +PI A + G++ +++V + S
Sbjct: 95 WSATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAPAAAGPAAAGGLMPPATTVAAFSKP 154
Query: 383 --PLKSAFQTTAAALPRRVSENLDPARRMSC-----CRQCLQNYEQELAKLSKEFEKSSS 435
L +F L EN A SC C+QC YEQE+A + S+S
Sbjct: 155 AASLMDSFVPFGGFLCDNYEENSLTAN--SCPQALRCQQCNDKYEQEVATII-----SAS 207
Query: 436 EVKSE-VARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH 494
+ +E + LP L N G + + + +D ++ K LQKKWN+ CL H
Sbjct: 208 GITAEDHHQGGLPSLLQNGSMM-GPNNGFDPVKVRDDRMVLNSKILNLQKKWNEYCLRLH 266
Query: 495 --------------PNF-----------HPS----SLGHERIVPVPLSMTGLYNSNLLAR 525
P + +PS S+G ++ V P +++ +++S+ AR
Sbjct: 267 QDCQRINRDPYKPFPRYIGVPADKERSANPSKGSESIGVQKDVIKPCAVSAVHSSST-AR 325
Query: 526 QPFQPKVQLNRNLGDTLQLNSNMVSS--------------------QPAERAVSPLNSPV 565
P V RN L L + S P + A +PV
Sbjct: 326 PISSPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNADNPDDHASPSSAAPV 385
Query: 566 RTDLVLGRSK-------------VLESAPEKTHIEPVK-DFLGC----ISSEP------- 600
TDLVL + +E + H+ P K D L +S +P
Sbjct: 386 ETDLVLCTPRDCSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCSWSS 445
Query: 601 ------PQNKLHE------SQNDQLQK--PL-----DPDSFKRLLKSLMEKVWWQQEAAS 641
+ LH S Q QK PL D ++K L++ L + V Q+EA S
Sbjct: 446 INVGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEEAVS 505
Query: 642 AVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGP 701
A+ ++ +C+ RRG S+ D+WL F G D + KK++A AL+EL+ G+ +I L
Sbjct: 506 AICESIVRCR-STESRRGP-SRNDIWLCFHGSDSMAKKRIAVALAELMHGSKENLIYLDL 563
Query: 702 RRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDS 761
+ + RGKT +D I E + + SV+ L++ID AD +V+ ++ A++ GR D
Sbjct: 564 NL-QDWDDSSFRGKTGIDCIVEQLSKKRRSVLFLDNIDRADCLVQDSLSDAIKSGRFQDM 622
Query: 762 YGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIR-------- 813
G+ + + + I +L+ + S L +G++ E+K+ LA+ +L++ +
Sbjct: 623 RGKVVDINDSIVVLSRSMIHGSKNGLEEGLSFSEEKI--LATRGHRLKILVEPGRAITSG 680
Query: 814 -----------------------GKTTKRRASWLDEEER-----STKPRKETGSGLSFDL 845
G +KR+ S D++E+ S+ R S + FDL
Sbjct: 681 CPSGKVVVSPRHFLTKIQASLCSGSISKRKLSMSDDQEKLQESPSSLKRLHRTSSIPFDL 740
Query: 846 NKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVD 905
N D+D ++ D + HE +G T + + LL+SVD +I FKP D
Sbjct: 741 NLPV----DEDEPFDADDDSSSHENSYGNTEKSI---------DALLHSVDGSINFKPFD 787
Query: 906 FGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLG--RTGLEDWTEKVLVPS 963
F ++ D+ + +G +EI A+E+++ W + ++ W E+V S
Sbjct: 788 FDKLADDMLQEFSNILRKNLGAECMLEIDVGAMEQILAAAWKSEDKGPVQTWLEQVFARS 847
Query: 964 LHQLKLRLPNNATAATDESATVRL 987
L +LKL+ + + S+T+RL
Sbjct: 848 LDELKLKYKHVS------SSTLRL 865
>gi|357142263|ref|XP_003572512.1| PREDICTED: uncharacterized protein LOC100838396 [Brachypodium
distachyon]
Length = 720
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 157/446 (35%), Positives = 209/446 (46%), Gaps = 112/446 (25%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL--------------- 45
MRAG T+ Q+LT EAA+V+ S+A A RR H Q TPLHVA TLL
Sbjct: 1 MRAGGYTVHQSLTAEAAAVVKMSLALARRRGHAQVTPLHVAFTLLTGSSSPSSAHHHQQP 60
Query: 46 ----ASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALERLPTAQQNVSPGL------- 94
+ G LR+AC+KSH LQCRALELCF+VAL RLPT SP
Sbjct: 61 ALSSSYAHGLLRRACVKSHS-----LQCRALELCFNVALNRLPTTDAGCSPPSSSLSASI 115
Query: 95 -----DPPISNALMAALKRAQAHQRRGCPEQQQQ-----------PLLAVKVELEQLIIS 138
+P +SNAL+AALKRAQA+QRRGC E Q Q PL+A+KVEL+QL++S
Sbjct: 116 IHQFNNPTLSNALVAALKRAQANQRRGCIELQSQLPPPPPTEQQQPLVAIKVELDQLVVS 175
Query: 139 ILDDPSVSRVMREASFSSPAVKATIEQS----LNSSCSVSNSSPIGLGFRPSSRNL---- 190
ILDDPSVSRVMREA FSS AVK+ IE+ L S+ + L RP N
Sbjct: 176 ILDDPSVSRVMREAGFSSAAVKSNIEEESASMLAHHHHHHQSASVAL-IRPHFFNEPHIL 234
Query: 191 -------YMNPRLQQAGGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFTC 243
+ P QA G S E VR L + K+ N ++
Sbjct: 235 DFPTNGGFGTPFSNQAPDGVVGSSCKEEDVRAILEAMMRKQGGRRRANPVVVGDTASVAE 294
Query: 244 DKAGIVSKLKDLGALI--------------ETKF---GNGDGVILDL------------- 273
G + + D G ++ + +F + D + DL
Sbjct: 295 ASVGQLMRRLDRGDVLPDELRGARVLRLHHQPRFMTRADLDASVADLRRRSADATAGVII 354
Query: 274 --GDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATC 331
GD++W V+ ++G + LA + E+ + AR GR WL+ A+
Sbjct: 355 YVGDIRWAVD---------DAGLAEHMAAELARLQGEL--MAARR----GRAWLVAAASY 399
Query: 332 ETYLRCQVYHPSMENDWDLQAVPIAA 357
+TY+RC+ +E W+LQ V + A
Sbjct: 400 KTYMRCR--GSPLEAAWELQPVVVPA 423
>gi|224059278|ref|XP_002299803.1| predicted protein [Populus trichocarpa]
gi|222847061|gb|EEE84608.1| predicted protein [Populus trichocarpa]
Length = 1025
Score = 183 bits (464), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 248/548 (45%), Gaps = 98/548 (17%)
Query: 5 LSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNS- 63
+S +Q LT EAA L+ ++A A RRNH QTT LH + LLA P+ LR AC ++ N+
Sbjct: 5 VSVARQCLTDEAARALDEAVAVARRRNHCQTTSLHAVSALLALPASTLRDACSRATTNAF 64
Query: 64 SHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQ--- 120
S Q RAL+L V+L+RLP+++ + DPPISN+LMAA+KR+QA+QRR P+
Sbjct: 65 SSRRQFRALDLSVGVSLDRLPSSR---TLDEDPPISNSLMAAIKRSQANQRRH-PDNFHL 120
Query: 121 -----QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATI-----EQSLNSS 170
QQ +KVE++ I+SILDDP VSRV EA F S +K I QS S
Sbjct: 121 HQIHCNQQAASVLKVEMKHFILSILDDPIVSRVFGEAGFRSYDIKIAIVHPPVSQSSKYS 180
Query: 171 ---------CSVSNSSPIGLGFRPSSRNLYMNPRLQQAGGVCGGQSE--PEMVVRES--- 216
C++ S+ G G RP + + L E +VR
Sbjct: 181 PVGCAPIFLCNLPGSNITGPG-RPPGFSFPFSSGLDDDDVGDDDVCRRIGEALVRRDGKG 239
Query: 217 -----LAKIESKELDGVLKNV-----------------------QIIRLDKDFTCDKAGI 248
+ SK L G + +V +II + DK +
Sbjct: 240 RNLLLVGVYASKALKGFVDSVNKENKGGVLPSEINGVSVISIEDEIIHFVSELGGDKEKM 299
Query: 249 VSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAE 308
K ++LG +E +G G++++ GD+K LV + V V
Sbjct: 300 GLKFEELGQELEQY--SGPGIVVNFGDMKVLVGENVCGDAVS----------------YL 341
Query: 309 IGKLVARFGGGGGRLWLIGTA-TCETYLRCQVYHPSMENDWDLQAVPIAA-KTPLSGMFP 366
+ KL + G G++WL+GTA + +TYL+ S+E DWDL+ +PIA+ K+P
Sbjct: 342 VSKLTSLLEGFRGKIWLVGTADSYDTYLKSVGRFSSVEKDWDLRVLPIASYKSP------ 395
Query: 367 RLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKL 426
+G SS + S P F T + S N + + CC C YE+++A +
Sbjct: 396 -VGDFSSKSSLLGSFVPFGGFFSTPSDFKKPTNSIN----QSIICCHLCNAKYEKDVAAI 450
Query: 427 SKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKW 486
K S+ ++ + LP L A+ G A + D D K L+ KW
Sbjct: 451 LK---MGSTTSVADQSSEKLPSLLQMAELDTGKAVDAVKV---DDDTALNAKILGLRNKW 504
Query: 487 NDTCLNQH 494
ND C H
Sbjct: 505 NDICQRLH 512
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 193/372 (51%), Gaps = 34/372 (9%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKK 679
+ FK +++++ EKV WQ A A+ V++CK G+G+ G+ SKGD+ + +GPDR+GKK
Sbjct: 633 EDFKSVMRAISEKVGWQDRATYAIGEAVSRCKAGHGRHHGSNSKGDISFILLGPDRIGKK 692
Query: 680 KMASALSELVSGA--SPIMIPLGPRR---------DHEEPEVR---VRGKTALDKIGEAV 725
K+ASAL+E++ G+ S I + LG D +E + R T +D+I +
Sbjct: 693 KIASALAEVMFGSTQSFISLDLGSHDKVSSSNSIFDSQELQYDDELGRSMTFVDRIASKL 752
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+ P S+I LE+ID+AD +V+ ++ A+ GR DS GRE+S N IF+ T+ + +
Sbjct: 753 SKKPHSLIFLENIDKADPLVQHSLSYALRTGRFPDSRGREVSTNNTIFVATSTIIVGNTN 812
Query: 786 FLSQGITLDEKKLTSLASGEWQLRLSIR--GKTTKRRASWLDEEERSTKPRKETGSGLSF 843
FLS+ ++ + L + WQ+++ + + T +R+ E + +E S S
Sbjct: 813 FLSENKSIKFSEEMILGAKSWQMQILVEHAAEATSKRS------EMKVRISREITSASSK 866
Query: 844 DLNKAADVGDDKDGSHNSSDLTVDHEEE---HGFTNRLLMTPSTSTPSQDLLNSVDSAIV 900
+KA S+ +L V+ E +G T+ ++ S+ +D + VD +V
Sbjct: 867 QAHKALR-------SYLDLNLPVEDTGECANYGDTDSDSISESSQAWLEDFSDQVDEKVV 919
Query: 901 FKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLGRT--GLEDWTEK 958
FK DF + + I K+F G + +EI DE + +++ WL +EDW E+
Sbjct: 920 FKTFDFDSLAEKIVKEIGKQFQMAFGYEILLEIDDEVMVQILAAAWLSEKERAMEDWIEE 979
Query: 959 VLVPSLHQLKLR 970
V+ + KL+
Sbjct: 980 VVGRGFRKAKLK 991
>gi|222628569|gb|EEE60701.1| hypothetical protein OsJ_14192 [Oryza sativa Japonica Group]
Length = 1050
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/223 (50%), Positives = 134/223 (60%), Gaps = 62/223 (27%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPS----------- 49
MRAG TI Q+LT EAA+VL ++ A RR H Q TPLHVA LL SP+
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLALGIARRRGHAQVTPLHVAFALL-SPACSPPQQQPAPP 59
Query: 50 --GYLRQACIKSHPNSS-----HPLQCRALELCFSVALERL------------------- 83
G L++AC++SHP+++ HPLQCRALELCF+VAL RL
Sbjct: 60 PYGLLKRACLRSHPSAAAAVAAHPLQCRALELCFNVALNRLPTSAPHSPPPSSSAPSGAV 119
Query: 84 --PTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE--------------------QQ 121
P A + P +P +SNAL+AALKRAQA+QRRGC E QQ
Sbjct: 120 APPFASSLIQP--NPTLSNALVAALKRAQANQRRGCVELQQQPPPPPPPPPPPVAATAQQ 177
Query: 122 QQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIE 164
QQPLLA+KVEL+QLIISILDDPSVSRVMREA FSS VK+ +E
Sbjct: 178 QQPLLAIKVELDQLIISILDDPSVSRVMREAGFSSSTVKSNLE 220
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 35/242 (14%)
Query: 207 SEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFT----CDKAGIVSKLKDLGALIE-T 261
S E V E L ++E ++ L +++L + +A + +K +L ++
Sbjct: 308 SMAEAVAGELLRRLEGGDVPDELAGAHLLKLQLSYVHVRLMSRADVDAKAAELRRSVDAV 367
Query: 262 KFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQV--LAEVVAEIGKLVARFGGG 319
K G G+++ +GDL+W +++ P + + +VAE+G+L+
Sbjct: 368 KRG---GLVVYVGDLRWALDEDHHHHHHPGADHHNTASSYSPVEHMVAELGRLLGDLRAS 424
Query: 320 G---GRLWLIGTATCETYLRCQVYHPSMENDWDLQA--VPIAAKTPLSGMFPRLGSNGIL 374
GR+WL+ TA+ +TY+RC+ PS+E+ W LQA VP A T L+ L + +
Sbjct: 425 APPRGRVWLVATASYQTYMRCRRRRPSLESAWALQAVVVPTGAGTGLA-----LNNLHAV 479
Query: 375 SSSVESLSPLKSAFQTT-------AAALPRRVSENLDPARR-------MSCCRQCLQNYE 420
+++ + P++ A T A P V+ +PA R + C +C NYE
Sbjct: 480 ATTTSNGEPVQQAMVATNHQQQQQQLASP-FVAMAAEPAARNELDDKLLVLCTECSHNYE 538
Query: 421 QE 422
+E
Sbjct: 539 RE 540
>gi|21741941|emb|CAD40432.1| OSJNBa0035B13.5 [Oryza sativa Japonica Group]
gi|215769315|dbj|BAH01544.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1064
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/223 (50%), Positives = 134/223 (60%), Gaps = 62/223 (27%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPS----------- 49
MRAG TI Q+LT EAA+VL ++ A RR H Q TPLHVA LL SP+
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLALGIARRRGHAQVTPLHVAFALL-SPACSPPQQQPAPP 59
Query: 50 --GYLRQACIKSHPNSS-----HPLQCRALELCFSVALERL------------------- 83
G L++AC++SHP+++ HPLQCRALELCF+VAL RL
Sbjct: 60 PYGLLKRACLRSHPSAAAAVAAHPLQCRALELCFNVALNRLPTSAPHSPPPSSSAPSGAV 119
Query: 84 --PTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE--------------------QQ 121
P A + P +P +SNAL+AALKRAQA+QRRGC E QQ
Sbjct: 120 APPFASSLIQP--NPTLSNALVAALKRAQANQRRGCVELQQQPPPPPPPPPPPVAATAQQ 177
Query: 122 QQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIE 164
QQPLLA+KVEL+QLIISILDDPSVSRVMREA FSS VK+ +E
Sbjct: 178 QQPLLAIKVELDQLIISILDDPSVSRVMREAGFSSSTVKSNLE 220
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 35/242 (14%)
Query: 207 SEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFT----CDKAGIVSKLKDLGALIE-T 261
S E V E L ++E ++ L +++L + +A + +K +L ++
Sbjct: 308 SMAEAVAGELLRRLEGGDVPDELAGAHLLKLQLSYVHVRLMSRADVDAKAAELRRSVDAV 367
Query: 262 KFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQV--LAEVVAEIGKLVARFGGG 319
K G G+++ +GDL+W +++ P + + +VAE+G+L+
Sbjct: 368 KRG---GLVVYVGDLRWALDEDHHHHHHPGADHHNTASSYSPVEHMVAELGRLLGDLRAS 424
Query: 320 G---GRLWLIGTATCETYLRCQVYHPSMENDWDLQA--VPIAAKTPLSGMFPRLGSNGIL 374
GR+WL+ TA+ +TY+RC+ PS+E+ W LQA VP A T L+ L + +
Sbjct: 425 APPRGRVWLVATASYQTYMRCRRRRPSLESAWALQAVVVPTGAGTGLA-----LNNLHAV 479
Query: 375 SSSVESLSPLKSAFQTT-------AAALPRRVSENLDPARR-------MSCCRQCLQNYE 420
+++ + P++ A T A P V+ +PA R + C +C NYE
Sbjct: 480 ATTTSNGEPVQQAMVATNHQQQQQQLASP-FVAMAAEPAARNELDDKLLVLCTECSHNYE 538
Query: 421 QE 422
+E
Sbjct: 539 RE 540
>gi|222615364|gb|EEE51496.1| hypothetical protein OsJ_32651 [Oryza sativa Japonica Group]
Length = 926
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 221/848 (26%), Positives = 361/848 (42%), Gaps = 184/848 (21%)
Query: 268 GVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIG 327
G+I+ +GDLK LV + + Q+ VVAE+ +++ G R+W++G
Sbjct: 104 GLIISIGDLKQLVPDEDA-----------EAQEKGRRVVAEVTRVLETHSKVG-RVWVMG 151
Query: 328 -TATCETYLRCQVYHPSMENDWDLQAVPIAA--KTPLSGMFPRLGSNGILSSSVESLS-- 382
+AT ETYL P ++ DWDLQ +PI A +G +++V + S
Sbjct: 152 WSATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAATAGPAAAAAGLMPPATTVAAFSKP 211
Query: 383 --PLKSAFQTTAAALPRRVSENLDPARRMSC-----CRQCLQNYEQELAKLSKEFEKSSS 435
L +F L EN A SC C+QC YEQE+A + S+S
Sbjct: 212 AASLMDSFVPFGGFLCDNYEENSLTAN--SCPQALRCQQCNDKYEQEVATII-----SAS 264
Query: 436 EVKSE-VARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH 494
+ +E + LP L N G + + + +D ++ K L+KKWN+ CL H
Sbjct: 265 GITAEDHHQGGLPSLLQNGSMM-GPNNGFDPVKARDDRMVLNSKILNLRKKWNEYCLRLH 323
Query: 495 PN--------FHP---------------------SSLGHERIVPVPLSMTGLYNSNLLAR 525
+ + P S+G ++ V P +++ +++S+ AR
Sbjct: 324 QDHQRINRDPYKPFPRYIGVPTDKERSANSSKGSESVGVQKDVIKPCAVSAVHSSST-AR 382
Query: 526 QPFQPKVQLNRNLGDTLQLNSNMVSSQP--AERA-----------------VSPLNS-PV 565
P V RN L L + S ER VSP ++ PV
Sbjct: 383 PISSPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNVDNPDDHVSPSSAAPV 442
Query: 566 RTDLVLGRSKV-------------LESAPEKTHIEPVK-DFLGC----ISSEP------- 600
TDLVLG + +E + H+ P K D L +S +P
Sbjct: 443 ETDLVLGTPRECSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCSWSS 502
Query: 601 ------PQNKLHE------SQNDQLQK--PL-----DPDSFKRLLKSLMEKVWWQQEAAS 641
+ LH S Q QK PL D ++K L++ L + V Q+EA S
Sbjct: 503 INVGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEEALS 562
Query: 642 AVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGP 701
A+ ++ +C+ RRG ++ D+WL F G D + KK++A AL+EL+ G+ +I L
Sbjct: 563 AICESIVRCR-STESRRGP-NRNDIWLCFHGSDSMAKKRIAVALAELMHGSKDNLIYLDL 620
Query: 702 RRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDS 761
+ + RGKT +D I E + + SV+ L++ID AD +V+ ++ A++ GR D
Sbjct: 621 NL-QDWDDSSFRGKTGIDCIVEQLSKKRQSVLFLDNIDRADCLVQDSLSDAIKSGRFQDM 679
Query: 762 YGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIR-------- 813
G+ + + + I +L+ + S L +G++ E+K+ LA+ +L++ +
Sbjct: 680 RGKVVDINDSIVVLSRSMIQGSKNGLEEGLSFSEEKI--LATRGHRLKILVEPGRAITSG 737
Query: 814 -----------------------GKTTKRRASWLDEEER-----STKPRKETGSGLSFDL 845
G +KR+ S D++E+ S+ R S + FDL
Sbjct: 738 CPSGKVVVSPRHFLTKIQASLCSGSISKRKLSISDDQEKLQESPSSSKRLHRTSSVPFDL 797
Query: 846 NKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVD 905
N D + D +SS HE +G T + + LL+SVD +I FKP D
Sbjct: 798 NLPVDEDEPLDADDDSS----SHENSYGNTEKSI---------DALLHSVDGSINFKPFD 844
Query: 906 FGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLG---RTGLEDWTEKVLVP 962
F ++ D+ + +G +EI A+E+++ W R + W E+V
Sbjct: 845 FDKLADDMLQEFSNILRKNLGSECMLEIDVGAMEQILAAAWKSEEDRKPVPTWLEQVFAR 904
Query: 963 SLHQLKLR 970
SL +LKL+
Sbjct: 905 SLDELKLK 912
>gi|357157735|ref|XP_003577897.1| PREDICTED: uncharacterized protein LOC100845733 [Brachypodium
distachyon]
Length = 1122
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 235/879 (26%), Positives = 387/879 (44%), Gaps = 189/879 (21%)
Query: 275 DLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIG-TATCET 333
DLK LV VP+ G LQ+ + VAE+ +++ G R+W++G +AT ET
Sbjct: 290 DLKELV--------VPDDGELQEAGR---RTVAEVTRVLETHRAGR-RVWVMGWSATYET 337
Query: 334 YLRCQVYHPSMENDWDLQAVPIAA--KTPLSGMFPRLGSNGILS---SSVESLSPLKSAF 388
YL P ++ DW+LQ +PI A +G+ P + S S +ES P
Sbjct: 338 YLTFLSKFPLLDKDWELQLLPITAVRSAAAAGLMPLATTAVAFSKPPSFMESFVPFGGV- 396
Query: 389 QTTAAALPRRVSENLDP-ARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLP 447
T ++ N P A R C+ C Y+QE+A + + S + + LP
Sbjct: 397 -TNDGYDANSLAANSCPQALR---CQHCNDRYDQEVATIIR----GSGITAEDHHQGGLP 448
Query: 448 QWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH------------- 494
L N + G + + + +D ++ K K + LQ KWN+ CL H
Sbjct: 449 SLLQNG-SMIGPNNGFDALKVRDDQMVLKSKIRNLQTKWNEYCLRLHQGCQRINRGSYQL 507
Query: 495 ----------------PNFHPSSLGHERIVPVPL--------SMTGLYNSNLLARQPFQP 530
P+ P S+ +R V PL + T + +++Q +
Sbjct: 508 FSNYIPVPADRERPANPSKGPESVALQREVIRPLVVPASQMNATTKSISPPSISKQSHED 567
Query: 531 ---KVQLNRNLGDT-LQ------LNSNMVSSQPAERAVSPLNSPVRTDLVLG-----RSK 575
K+Q + + GD LQ + N+ + E VSP S V TDLVLG SK
Sbjct: 568 SVLKLQASHSKGDEHLQDRGVQSRHENLSNFHDCEDHVSP--SSVATDLVLGTPRGSSSK 625
Query: 576 VLESA------------PEKTH---IEPVKDF---LGCISS-----EPPQNKLHESQNDQ 612
SA P+K + ++P + F C S +P + LH + +
Sbjct: 626 GTNSACWKQSVDAELSIPKKVNDLNLKPPQVFAQPYACSRSSTNMGQPSPSALHSAASGG 685
Query: 613 L------QKPL-------DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRG 659
+ QKP D + K+L++SL + V Q+EA A+ ++ CK +RRG
Sbjct: 686 MSAFGHWQKPSHLAAQGSDLSNSKQLVESLFKVVGRQEEALKAICESIAWCK-SMERRRG 744
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALD 719
A K D+W F G D + K+K+ AL+EL+ G+ MI L + + RGKT D
Sbjct: 745 ANRKNDIWFSFHGSDSMAKRKVGVALAELLHGSKENMIYLD-LSPQDWGDSSYRGKTGTD 803
Query: 720 KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
I + + + SVI L+++D+AD +V+ + A E GR D G+E+ + + + +L+
Sbjct: 804 CIVDELSKKRRSVIFLDNVDKADCLVQDTLIHASETGRFRDLRGKEVDINDSVVVLSTRT 863
Query: 780 L--PDSLKF-LSQGITLDEKKLTSLASGEWQLRLSI-------RGKT------------- 816
S+ F + G T E+K+ LA+ QL+L + RG +
Sbjct: 864 ARGSKSVPFGVEDGHTFSEEKI--LAARGHQLKLLVESDMVISRGPSGKVSVSPRHPLTK 921
Query: 817 -----------TKRRASWLDEEER------STKPRKETGSGLSFDLNKAADVGDDKDGSH 859
+KR+ + D++E S R S + FDLN + D DGS+
Sbjct: 922 IQASLYSGSSISKRKLNISDDQELKQQESPSISKRLHRTSSVPFDLN----LPMDDDGSN 977
Query: 860 NSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITK 919
++ + + ++ G TP S+ LL SVD ++ FKP DF ++ D ++
Sbjct: 978 DADNHSSSNDNSSG-------TPERSS-IDSLLCSVDESVDFKPFDFNKVADDTLQELSD 1029
Query: 920 KFSSIIGDALSIEILDEALEKLVGGVWL---GRTGLEDWTEKVLVPSLHQLKLRLPNNAT 976
++G ++++ A+++++ W G+ L+ W E+V SL +LKL+ +A
Sbjct: 1030 TLRGVLGPGCTLQVDVGAMDQMLAVAWTSLEGKRPLQAWLEQVFSRSLEELKLKCGKHAC 1089
Query: 977 AATDESATVRL-ELDDGSGSRSH---GELLPSSIRVVVE 1011
S+T+RL +D +G + H G LLPS R+++E
Sbjct: 1090 -----SSTLRLVACEDIAGVKEHDGFGGLLPS--RIILE 1121
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 105/183 (57%), Gaps = 21/183 (11%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL--ASPSG--YLRQAC 56
M ++ +Q L P A + L+ ++ A RR H QTT LH+ ++LL A+PS LR A
Sbjct: 1 MPTPVAAARQCLAPAAVAALDSAVVSARRRAHAQTTSLHLISSLLSPAAPSSPPLLRDAL 60
Query: 57 IKSHPNSSHP-LQCRALELCFSVALERLPTAQQNVSPGL----DPPISNALMAALKRAQA 111
++ + P +Q +ALELCF+V+L+RLP+A S +PP+SN+LMAA+KR ++
Sbjct: 61 ARARSAAYAPRVQLKALELCFAVSLDRLPSASAASSSSSAESDEPPVSNSLMAAVKR-RS 119
Query: 112 HQRRG-----------CPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK 160
HQRR + VKVEL QL+++ILDDP VSRV +A F S +K
Sbjct: 120 HQRRTPTPSVYVHHNHALSTRAASASQVKVELSQLVLAILDDPVVSRVFGDAGFRSADIK 179
Query: 161 ATI 163
I
Sbjct: 180 LAI 182
>gi|255592933|ref|XP_002535750.1| conserved hypothetical protein [Ricinus communis]
gi|223522072|gb|EEF26633.1| conserved hypothetical protein [Ricinus communis]
Length = 596
Score = 180 bits (456), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 152/554 (27%), Positives = 261/554 (47%), Gaps = 71/554 (12%)
Query: 508 VPVPLSMTG---LYNSNLLARQ-----PFQPKVQLNRNLGDTLQLNSNMVSSQPAERAVS 559
+P+P+S + S LL +Q P+ P + L +++ PA+R S
Sbjct: 61 IPIPVSSEAGNVSFQSKLLGQQKEKGGPWFPPIILP-------------ITNLPADRTSS 107
Query: 560 PLNSPVRTDLVLGRSKVLESAPEKT-----HIEPVKDFLGCISSEPPQNKLHESQ---ND 611
+ V TDL LG S T H E ++ F G SSE ++ Q +
Sbjct: 108 SSVTSVTTDLGLGTIYASSSREPITPKLCDHREYLQRFSGFKSSEFEVSESTSYQIIPSS 167
Query: 612 QLQKP-----LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDM 666
+ P D K + K+L EKV WQ+EA A+ +++CK G G+ G+ ++G++
Sbjct: 168 RFSNPSSGGHFDYRDCKSITKALTEKVGWQEEAICAITRAISRCKAGYGRSCGSTARGNI 227
Query: 667 WLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPR--------------RDHEEPEVRV 712
WL F+GPD+VGKK++AS L+E++ G+ +I + R ++ + +V+
Sbjct: 228 WLTFLGPDKVGKKRIASMLAEIMFGSHEHLISVDLRFHDGSSQLNSVFECQESNDYDVKF 287
Query: 713 RGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVI 772
RGKT +D I + + P SV+LLE++D+AD++V+ ++ +A+ G+ DS+GREI + N+I
Sbjct: 288 RGKTVVDYISMELGKRPHSVVLLENVDKADLLVQNSLSQAVRTGKFADSHGREIGINNMI 347
Query: 773 FILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSI--------RGKTTKRRASWL 824
F++T+ + L Q +T+ + L + WQ+++ I RG + S L
Sbjct: 348 FVMTSTSAVGNKSHLPQKVTIKFSEERILGAKSWQMKMLIKHAAEGSNRGSEMTMKFSRL 407
Query: 825 DEEERS-TKPRKETGSGLSFDL---NKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLM 880
S RK G+ + + N+A G +L V+ EE+ +
Sbjct: 408 VTSTASPVNKRKLDGASDTAEQDFSNEAKKQAHKLFGPSLDLNLPVEETEENNDSGS-CG 466
Query: 881 TPSTSTPSQ----DLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDE 936
+ S S SQ D L+ VD +VFKP +F + + I+ F G + +EI DE
Sbjct: 467 SDSISENSQAWLDDFLDQVDEKVVFKPFNFDGLAEKIVREISTHFHKAFGTEVPLEIDDE 526
Query: 937 ALEKLVGGVWLG--RTGLEDWTEKVLVPSLHQLKLRLPNNATAATDESATVRLELDDGSG 994
+ +++ WL +EDW E+V+ + + + N A L +++
Sbjct: 527 VMVQILAASWLSDRSRAVEDWVEEVVGRGFMEARQKYGINVQYIVKLVACTSLLVEE--- 583
Query: 995 SRSHGELLPSSIRV 1008
R+ G LP+ I +
Sbjct: 584 -RAPGICLPARINL 596
>gi|297602401|ref|NP_001052404.2| Os04g0298700 [Oryza sativa Japonica Group]
gi|255675299|dbj|BAF14318.2| Os04g0298700 [Oryza sativa Japonica Group]
Length = 517
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/223 (50%), Positives = 134/223 (60%), Gaps = 62/223 (27%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPS----------- 49
MRAG TI Q+LT EAA+VL ++ A RR H Q TPLHVA LL SP+
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLALGIARRRGHAQVTPLHVAFALL-SPACSPPQQQPAPP 59
Query: 50 --GYLRQACIKSHPNSS-----HPLQCRALELCFSVALERL------------------- 83
G L++AC++SHP+++ HPLQCRALELCF+VAL RL
Sbjct: 60 PYGLLKRACLRSHPSAAAAVAAHPLQCRALELCFNVALNRLPTSAPHSPPPSSSAPSGAV 119
Query: 84 --PTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE--------------------QQ 121
P A + P +P +SNAL+AALKRAQA+QRRGC E QQ
Sbjct: 120 APPFASSLIQP--NPTLSNALVAALKRAQANQRRGCVELQQQPPPPPPPPPPPVAATAQQ 177
Query: 122 QQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIE 164
QQPLLA+KVEL+QLIISILDDPSVSRVMREA FSS VK+ +E
Sbjct: 178 QQPLLAIKVELDQLIISILDDPSVSRVMREAGFSSSTVKSNLE 220
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
Query: 207 SEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFT----CDKAGIVSKLKDLGALIE-T 261
S E V E L ++E ++ L +++L + +A + +K +L ++
Sbjct: 308 SMAEAVAGELLRRLEGGDVPDELAGAHLLKLQLSYVHVRLMSRADVDAKAAELRRSVDAV 367
Query: 262 KFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQV--LAEVVAEIGKLVARFGGG 319
K G G+++ +GDL+W +++ P + + +VAE+G+L+
Sbjct: 368 KRG---GLVVYVGDLRWALDEDHHHHHHPGADHHNTASSYSPVEHMVAELGRLLGDLRAS 424
Query: 320 G---GRLWLIGTATCETYLRCQVYHPSMENDWDLQA--VPIAAKTPLS 362
GR+WL+ TA+ +TY+RC+ PS+E+ W LQA VP A T L+
Sbjct: 425 APPRGRVWLVATASYQTYMRCRRRRPSLESAWALQAVVVPTGAGTGLA 472
>gi|47496876|dbj|BAD19840.1| heat shock protein-related-like [Oryza sativa Japonica Group]
Length = 778
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 267/617 (43%), Gaps = 153/617 (24%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL--------------- 45
MRAG T+ Q L+ +AA+VL ++A A RR H Q TPLHVA TLL
Sbjct: 1 MRAGGYTVHQALSADAAAVLKLALALARRRGHAQLTPLHVAFTLLRSSSSSSSSSSPSDP 60
Query: 46 -------ASPS----GYLRQACIKSHPNS----------SHPLQCRALELCFSVALERLP 84
PS G LR+AC+++HP SHPL+CRALELCF+VAL RLP
Sbjct: 61 PPFACSGGEPSCCAHGLLRRACVRAHPAVAACAPAAAAASHPLRCRALELCFNVALNRLP 120
Query: 85 TAQQNVSPGL-----------DPPISNALMAALKRAQAHQRRGCPE------------QQ 121
G DP +SNAL+AALKRAQA+QRRGC E Q
Sbjct: 121 ATNAMADCGRACSPASSLVPPDPTLSNALVAALKRAQANQRRGCIELQSLQPPQHALQPQ 180
Query: 122 QQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS--------------- 166
QQPLLA+KVEL+QLIISILDDPSVSRVMREA FSS AVK+T+E+
Sbjct: 181 QQPLLAIKVELDQLIISILDDPSVSRVMREAGFSSAAVKSTLEEGGAMLPSLGGHHVCYS 240
Query: 167 ---------LNSSCSVSNSSPIGLGF--RPSS-----------------RNLYMNPRLQQ 198
L++ + +P F RP + R + P
Sbjct: 241 SSSPEPHIDLDAHAASGGGAPWPAQFLHRPDTGSSCKEEDVRAILEVMVRKQWARPNPVV 300
Query: 199 AGGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFT-------CDKAGIVSK 251
G S E V E + ++E+ ++ G L+ ++RL D V++
Sbjct: 301 VG---DSVSVAEASVAELMRRLETGDVPGELRGAHVLRLHLSRVHLRLMTRADVDAQVAE 357
Query: 252 LKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGK 311
L+ I G+++ +GD++W V+ + L + +VAE+ +
Sbjct: 358 LRRTANSIVVD-AKAAGLVIYVGDVRWAVDDDDHH----HHHALAEYSAPEDHMVAELAR 412
Query: 312 LVARF-GGGGGRLWLIGTATCETYLRCQVYH-----PSMENDWDLQAVPIAAKTPLSGMF 365
L++ GR WL+ A+ +TY+RCQ PS+E W LQAV + P
Sbjct: 413 LMSELRAASRGRAWLVAAASYQTYVRCQQRRRRRRAPSLEATWSLQAVVV----PAGAGA 468
Query: 366 PRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENL----DPARRMSCCRQCLQNYEQ 421
+ + + P + A A L + +L D + C +C YE+
Sbjct: 469 DAGTGLSLGRRAPPAPPPSRVAEDDQIAKLGEIPTLDLALGGDDGGVPALCAECADGYEK 528
Query: 422 ELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQE 481
E +++ + + ++ +A P W H QT +K + + E
Sbjct: 529 EASQVRAKADGTT------LALTYFPGWPH---------ANEPQTSHKAELM-------E 566
Query: 482 LQKKWNDTCLNQHPNFH 498
L++KW C H H
Sbjct: 567 LRRKWGILCQRVHSRSH 583
>gi|218190701|gb|EEC73128.1| hypothetical protein OsI_07140 [Oryza sativa Indica Group]
Length = 777
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 219/470 (46%), Gaps = 123/470 (26%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL--------------- 45
MRAG T+ Q L+ +AA+VL ++A A RR H Q TPLHVA TLL
Sbjct: 1 MRAGGYTVHQALSADAAAVLKLALALARRRGHAQLTPLHVAFTLLRSSSSSSSSSSPSDP 60
Query: 46 -------ASPS----GYLRQACIKSHPNS----------SHPLQCRALELCFSVALERLP 84
PS G LR+AC+++HP SHPL+CRALELCF+VAL RLP
Sbjct: 61 PPFACSGGEPSCCAHGLLRRACVRAHPAVAACAPAAAAASHPLRCRALELCFNVALNRLP 120
Query: 85 TAQQNVSPGL-----------DPPISNALMAALKRAQAHQRRGCPE------------QQ 121
G DP +SNAL+AALKRAQA+QRRGC E Q
Sbjct: 121 ATNAMADCGRACSPASSLVPPDPTLSNALVAALKRAQANQRRGCIELQSLQPPQHALQPQ 180
Query: 122 QQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS--------------- 166
QQPLLA+KVEL+QLIISILDDPSVSRVMREA FSS AVK+T+E+
Sbjct: 181 QQPLLAIKVELDQLIISILDDPSVSRVMREAGFSSAAVKSTLEEGGAMLPSLGGHHVCYS 240
Query: 167 ---------LNSSCSVSNSSPIGLGF--RPSS-----------------RNLYMNPRLQQ 198
L++ + +P F RP + R + P
Sbjct: 241 SSSPEPHIDLDAHAASGGGAPWPAQFLHRPDTGSSCKEEDVRAILEVMVRKQWARPNPVV 300
Query: 199 AGGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFT-------CDKAGIVSK 251
G S E V E + ++E+ ++ G L+ ++RL D V++
Sbjct: 301 VG---DSVSVAEASVAELMRRLETGDVPGELRGAHVLRLHLSRVHLRLMTRADVDAQVAE 357
Query: 252 LKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGK 311
L+ I G+++ +GD++W V+ + L + +VAE+ +
Sbjct: 358 LRRTANSIVVD-AKAAGLVIYVGDVRWAVDDDDHH----HHHALAEYSAPEDHMVAELAR 412
Query: 312 LVARF-GGGGGRLWLIGTATCETYLRCQVYH-----PSMENDWDLQAVPI 355
L++ GR WL+ A+ +TY+RCQ PS+E W LQAV +
Sbjct: 413 LMSELRAASRGRAWLVAAASYQTYVRCQQRRRRRRAPSLEATWSLQAVVV 462
>gi|449519683|ref|XP_004166864.1| PREDICTED: uncharacterized protein LOC101231048, partial [Cucumis
sativus]
Length = 702
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 175/666 (26%), Positives = 290/666 (43%), Gaps = 135/666 (20%)
Query: 405 PARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAE 464
P + + C QC +EQE+A + K + SE + + P + D K +
Sbjct: 25 PNQSFTRCHQCTDKFEQEVAAIWKPGSSTVLGHHSESSLHMSPTEI------DAKCKEFD 78
Query: 465 QTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPS-----------------SLGHERI 507
+ +D K LQKKWND C P +L HER
Sbjct: 79 MYKTRDDRSAMSDKVIGLQKKWNDICRLHQRQLFPKLDISHTMHGVSFESPRFALDHERS 138
Query: 508 VPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLN-----------SNMVS-SQPAE 555
P S+TG + ++ +Q N N T Q++ SN+VS + P E
Sbjct: 139 GEEPSSVTG--DRFVIGHPCLSRDLQNNLNTKQTRQISEISDSHTDNFQSNIVSGASPGE 196
Query: 556 ----RAVS-------------PLNSP---VRTDLVLG---------RSKVLESAPEKTHI 586
R S PL S V TDL LG + K+++ +K I
Sbjct: 197 AESLRIFSKPVVPKGHLHSDKPLPSSFISVTTDLGLGTLYASAGENKRKIVDLESQKVSI 256
Query: 587 EPVKDFLGCISSEPPQNKLHESQ---NDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAV 643
+ + S P N +S + + LD FK L +L EKV WQ +A S++
Sbjct: 257 QHLTGSNKTEYSRPSNNNPGQSSGFSDLSAGQVLDIREFKSLWNALNEKVSWQGKATSSI 316
Query: 644 ATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASP--IMIPLGP 701
T+ +C+ G GKRR + S+GD+WL F+GPD +GK+K++ AL+EL+ G+ I + G
Sbjct: 317 VETILRCRTGGGKRRSSNSRGDIWLTFLGPDMMGKRKISFALAELMVGSRENLISVDFGS 376
Query: 702 R-RDHEEPEV-----------RVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNI 749
+ RD + R RG+T +D + +++ P SV+LLE++D+AD+ + +
Sbjct: 377 QDRDQRHNSLFDCQGLNGYDERFRGQTVVDYVAGELRKKPSSVVLLENVDKADVRAKSCL 436
Query: 750 KRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTS---LASGEW 806
+A+ G+ +DS+GR+ ++ N IF+ T LP+ +K S + ++ + + LA+
Sbjct: 437 SQAIATGKFLDSHGRQFTINNTIFLTT---LPNKVKKTSNLDSEEQTEFSEDRILAARNC 493
Query: 807 QLRLSIRGKTT-------------------------KRRASWLDEEERSTKPRKETGSGL 841
Q++++++G T+ K+R LD E T+ +K + S +
Sbjct: 494 QMQITVQGFTSDVSKCKNTNVRITSAPRGSSNLSIFKKRK--LDNE--FTELKKASSSSM 549
Query: 842 SF-DLNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIV 900
SF DLN + +D+ N D D E + + L VD I+
Sbjct: 550 SFLDLNLPLEEVEDES---NEGDCDSDSASE-----------GSEAWVDEFLEQVDEKIM 595
Query: 901 FKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWLG--RTGLEDWTEK 958
FKP +F + I +F + G + +EI + + +++ WL + +E+W E
Sbjct: 596 FKPYNFDEAAEKLVKEINLQFRRVFGSEVVLEIDYKIIVQILAAKWLSEKKNAMEEWLEL 655
Query: 959 VLVPSL 964
VL S
Sbjct: 656 VLHRSF 661
>gi|296084461|emb|CBI25020.3| unnamed protein product [Vitis vinifera]
Length = 781
Score = 176 bits (445), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 154/514 (29%), Positives = 232/514 (45%), Gaps = 104/514 (20%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG+ ++QQ LT +AAS++ ++ A RR H Q TPLHVA+ +LAS SG LR AC++SH
Sbjct: 1 MRAGVCSVQQVLTADAASMVKQAVTLARRRGHAQVTPLHVASVMLASSSGLLRSACLRSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISN-ALMAALKRAQAHQRRGCPE 119
SHPLQC+ALELCF+VAL RLP + SP L P S+ +L AL+ G
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASSS--SPLLAPHSSHPSLSNALESNNPPLILGTNV 115
Query: 120 QQQQPLLAVKVEL--------EQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSC 171
Q + V L E+ + S+LD +F+S + T+
Sbjct: 116 SQSSTFIQFGVTLNNPFDEAQEEDVKSLLD-----------AFTSKRRRNTV-------- 156
Query: 172 SVSNSSPIGLGFRPSSRNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKIESKELDGVLKN 231
+ L A GV VR + K E ++ G L+
Sbjct: 157 -------------------VVGETLASAEGV----------VRGLMNKFERGDVPGDLRY 187
Query: 232 VQIIRLD----KDFTCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSF 287
VQ I L K+ + K + KL L L+++ GV+L LGDLKW+ E +
Sbjct: 188 VQFISLPLFSLKNLS--KEEVEQKLVKLTCLLKSYVCR--GVVLYLGDLKWVSEFE---- 239
Query: 288 GVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMEND 347
N G + + ++ E+G+++ G GR+WL+GTAT +TY+RC+ HPS+E
Sbjct: 240 --SNYGERRNYCSPVEHIIMELGRMMCGI-GDRGRMWLLGTATFQTYMRCKAGHPSLETI 296
Query: 348 WDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPAR 407
W+L + I + G+ L SN L+ FQ+ A+ S +
Sbjct: 297 WELHPLTIPVGS--LGLGLNLDSN------------LQGRFQSKASGDGTSWSLLQSGDK 342
Query: 408 RMSCCRQCLQNYEQELAKLSKEFEKS-SSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQT 466
++C C N+++E ++ F S+ + LP WL K D
Sbjct: 343 HLTCSTNCSDNFDKESQSIACSFRNGESTTTITTSTSSSLPSWLQKEKRRKIMD------ 396
Query: 467 ENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPS 500
DQ+ + + ++L KWN C + H H +
Sbjct: 397 ---DQECV---QVRDLCNKWNSFCSSVHKKAHST 424
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 154/597 (25%), Positives = 255/597 (42%), Gaps = 85/597 (14%)
Query: 210 EMVVRESLAKIESKELDGVLKNVQIIRLD----KDFTCDKAGIVSKLKDLGALIETKFGN 265
E VVR + K E ++ G L+ VQ I L K+ + K + KL L L+++
Sbjct: 166 EGVVRGLMNKFERGDVPGDLRYVQFISLPLFSLKNLS--KEEVEQKLVKLTCLLKSYVCR 223
Query: 266 GDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWL 325
G V+L LGDLKW+ E + N G + + ++ E+G+++ G G R+WL
Sbjct: 224 G--VVLYLGDLKWVSEFE------SNYGERRNYCSPVEHIIMELGRMMCGIGDRG-RMWL 274
Query: 326 IGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLK 385
+GTAT +TY+RC+ HPS+E W+L + I + G+ L SN L+
Sbjct: 275 LGTATFQTYMRCKAGHPSLETIWELHPLTIPVGS--LGLGLNLDSN------------LQ 320
Query: 386 SAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPL 445
FQ+ A+ S + ++C C N+++E ++ F S +
Sbjct: 321 GRFQSKASGDGTSWSLLQSGDKHLTCSTNCSDNFDKESQSIACSFRNGESTTTITTSTSS 380
Query: 446 -LPQWLHNAKAHD-GDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPSSLG 503
LP WL K DD+ Q +D W + KK + T + NF S
Sbjct: 381 SLPSWLQKEKRRKIMDDQECVQV--RDLCNKWNSFCSSVHKKAHST--EKALNFSSPSPS 436
Query: 504 HERIVPVPLSMTGLYNSNLLARQPFQPK-------VQLNRNLGDTLQLNSNMVSSQPAER 556
I L ++L +PK ++ N+ + L+ +M AER
Sbjct: 437 STSISSYDQCSPNLQQNHLSWPAIIEPKPPLKEHQFWISENVDEGLEPKFSM---HIAER 493
Query: 557 AVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKP 616
N P+ DL+ + SA IE + G K
Sbjct: 494 -----NFPI-PDLLSNPNSSPNSASSSEAIEDGEGLYGF-------------------KE 528
Query: 617 LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCK----LGNGKRRGAGSKGDMWLLFMG 672
L+ ++ + L +L +V WQ++ +A+T+ +C+ G K + K + WLLF+G
Sbjct: 529 LNAENLRILCNALERRVPWQKDIIPEIASTILECRSGTLRGKNKLKQREDKEETWLLFLG 588
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLG------PRRDHEEPEVRVRGK-----TALDKI 721
D GK K+A +++LV G+ I +G R D E + + + + ++K
Sbjct: 589 VDFQGKDKIAREIAKLVFGSQSKFISIGLSSLGSTRADSTEDFLSKQARDEPVGSYIEKF 648
Query: 722 GEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
EAV NP V +ED+++ D + +KR +E GR+ + G SL + I I + +
Sbjct: 649 AEAVHENPHRVFFIEDVEQLDYSSQMGVKRGIESGRIQIAGGEAFSLEDAIIIFSCE 705
>gi|147783009|emb|CAN72301.1| hypothetical protein VITISV_024923 [Vitis vinifera]
Length = 1166
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 207/409 (50%), Gaps = 70/409 (17%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +S +Q LTPEAA L+ ++ A RR H QTT LH + +L+ PS LR AC ++
Sbjct: 1 MPTSVSLARQCLTPEAAHALDEAVGVARRRGHAQTTSLHAVSAMLSLPSSLLRDACARAR 60
Query: 61 PNSSHP--LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCP 118
NS++ LQ +ALELC SV+L+R+P+ Q DPP+SN+LMAA+KR+QA+QRR P
Sbjct: 61 -NSAYSARLQFKALELCLSVSLDRVPSTQL----ADDPPVSNSLMAAIKRSQANQRRQ-P 114
Query: 119 EQ----------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATI----E 164
E + +KVEL+ LI+SILDDP VSRV EA F S +K I
Sbjct: 115 ENFQLYQQLQQQSSSSISCIKVELQHLILSILDDPVVSRVFGEAGFRSCDIKLAIVRPLP 174
Query: 165 QSLNSS---------CSVSNSSPIGLGFR-PSSRNLYMNPRLQQAG-------------- 200
Q L S C+ +S P F P S + ++ G
Sbjct: 175 QLLRYSRSRGPPLFLCNFIDSDPSRRSFSFPYSGFFTGDENCKRIGEVLGRGKGRNPLLV 234
Query: 201 GVCGG---QSEPEMVV--RESLAKIESKELDGVLKNVQIIRLDKDFTCDKAGIVSKLKDL 255
GVC QS EMV R ++ +E L + ++R + CD+ I S+ +++
Sbjct: 235 GVCAYDALQSFTEMVEKGRYNILPVEISGLSIICIEKDVLRFFNE-NCDQGLINSRFEEV 293
Query: 256 GALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVAR 315
G L++ G G++++ GDLK +++ S GV + Q + L E+
Sbjct: 294 GVLVQHCLGA--GLVVNFGDLKVFIDRDDASVGVVSYVVSQLTR--LLEI---------- 339
Query: 316 FGGGGGRLWLIG-TATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSG 363
GG++ L+G ++ ETYL+ +PS+E DWDLQ +PI + P G
Sbjct: 340 ---HGGKVRLMGAVSSYETYLKFLNRYPSIEKDWDLQLLPITSLRPPMG 385
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 201/440 (45%), Gaps = 55/440 (12%)
Query: 565 VRTDLVLGR----SKVLESAPEKTHIEPVKDFLGCISSEPPQN----------KLHESQN 610
V TDL LG SK L+ ++TH+ P+ DF SS P N
Sbjct: 693 VTTDLGLGLFYPPSKQLKKDAKQTHLGPLPDF----SSRYPANVDLVNGSISNPSSSCSC 748
Query: 611 DQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLF 670
D FK L ++L E++ WQ EA S ++ T+ C+LGN KR GA KGD+W F
Sbjct: 749 PDSWGQSDQRDFKTLFRALTERIDWQHEAISVISETIAHCRLGNEKRHGASPKGDIWFNF 808
Query: 671 MGPDRVGKKKMASALSELVSG--ASPIMIPLGPR-------RDHEEPE-----VRVRGKT 716
+GPDR KKK+A AL+E++ G S I + L + +H E V+ RGK
Sbjct: 809 VGPDRFSKKKIAVALAEILYGRRESFICVDLSSQDGMIHKSANHGSQEMNGYNVKFRGKN 868
Query: 717 ALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT 776
+D I + + P SV+ LE++D+AD++ R ++ A+ G+ DS+GRE+S+ N F+ T
Sbjct: 869 VVDYIAGELSKKPLSVVFLENVDQADLLARNSLFHAINTGKFCDSHGREVSINNATFVTT 928
Query: 777 ADWLPDSLKFLSQG---ITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKP 833
A + K LS G E++++ Q+ + R D S
Sbjct: 929 ARFRQGD-KVLSSGKEPAKYSEERISRAKGLPMQILIGY-----SHREDDHDNFGHSLSL 982
Query: 834 RKETGSGLS--FDLNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDL 891
T +G+S LNK VG + + + + T L P+ QD
Sbjct: 983 SITTNNGISNQIFLNKRKLVGSSETLEQSETSEMAKRAHKASNTYLDLNLPAEENEGQD- 1041
Query: 892 LNSVD---------SAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLV 942
+ VD + +VFKP DF + V I+K F IG +EI + +E+++
Sbjct: 1042 ADHVDPDNDIPPLKTPVVFKPFDFDALAEKVLREISKTFHETIGPESLLEINTKVMEQIL 1101
Query: 943 GGVWLG-RTG-LEDWTEKVL 960
RTG + DW E+VL
Sbjct: 1102 AAACSSDRTGAVGDWVEQVL 1121
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
Query: 378 VESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEFEKSSSEV 437
+ES PL F ++ L ++S + R C QC + EQE+A LSK +S
Sbjct: 461 MESFVPL-GGFFSSPCELKGQLSGSYQFTSR---CHQCNEKCEQEVAALSKGGFTASV-- 514
Query: 438 KSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQD-LIWKQKSQELQKKWNDTC 490
++ +P LP WL A+ G + + KD L+ K LQKKW++ C
Sbjct: 515 -ADQYQPNLPAWLQMAEL--GKXTAFDVAKAKDDGMLLLNAKIMGLQKKWDNIC 565
>gi|414587306|tpg|DAA37877.1| TPA: hypothetical protein ZEAMMB73_032476 [Zea mays]
Length = 928
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 130/178 (73%), Gaps = 14/178 (7%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSG--YLRQACIK 58
MRAG T+QQ+LT EAA+V+ +++ A RR + Q TPLHVA+ +LA+ LR AC++
Sbjct: 64 MRAGGCTVQQSLTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLAAAPAGQLLRAACLR 123
Query: 59 SHPNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD------PPISNALMAALKRAQAH 112
SH SHPLQC+ALELCF+VAL RLP + + G + P +SNAL+AA KRAQAH
Sbjct: 124 SH---SHPLQCKALELCFNVALNRLPASASSPLLGGNHHCYHPPSLSNALVAAFKRAQAH 180
Query: 113 QRRG--CPEQQQQPLLA-VKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSL 167
QRRG Q QQP++A VK+EL+QL++SILDDPSVSRVMR+A FSS VKA +EQ++
Sbjct: 181 QRRGGSVESQHQQPVVAAVKIELDQLVVSILDDPSVSRVMRDAGFSSTQVKANVEQAV 238
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 25/189 (13%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR----GAGSKGDMWLLF 670
K L ++ K L +L ++V WQ+E VA+ V QC+ G KRR A +K + W+LF
Sbjct: 656 KELSAENLKLLCGALEKEVPWQKEIIPEVASAVLQCRSGIAKRRDKSRSADAKEETWMLF 715
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLGP---------------RRDHEEPEV----- 710
+G D GK+++A L+ LV G+ + + P R ++ P +
Sbjct: 716 LGGDADGKERVARELASLVFGSRDSFLAIRPGASSSSPPRSGSSEGHRSNKRPRMSPPPP 775
Query: 711 -RVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLG 769
L+++ +AV NP VI +E +++A + IK A+E G + + G E+ +G
Sbjct: 776 GEESAPACLERLHDAVSENPHRVIFMEGVEQAGRDCQLGIKEAIESGVVRNRAGVEVGVG 835
Query: 770 NVIFILTAD 778
+ I +L+ +
Sbjct: 836 DAIVVLSCE 844
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 251 KLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIG 310
+L +L L+ K G V+L + DLKW E F + G ++ V +
Sbjct: 360 RLGELRCLV--KQGRRQRVVLVVEDLKWAAE-----FWAGHDGQSGRRGGYYYCAVEHVV 412
Query: 311 KLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAA 357
+ GG WL+G T + Y +C+V PS+E+ W LQ + + A
Sbjct: 413 NELRALASGGSLCWLLGFGTYQAYTKCRVGQPSLESLWGLQTLTVPA 459
>gi|356569296|ref|XP_003552839.1| PREDICTED: uncharacterized protein LOC100786125 [Glycine max]
Length = 942
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 199/762 (26%), Positives = 334/762 (43%), Gaps = 139/762 (18%)
Query: 316 FGG-GGGRLWLIGTA-TCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPR------ 367
FGG +LWL+G A + + YL PS+E DWDLQ +PI + PLS + R
Sbjct: 199 FGGVQYDKLWLMGAAASYDNYLNFVGKFPSIEKDWDLQLLPITSVKPLSESYHRPSLMDS 258
Query: 368 -LGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCL-QNYEQELAK 425
+ G SS + +PL +F +P C QC + E E+
Sbjct: 259 FVPFGGFFSSQSDLKAPLSGSFY----CVPH--------------CHQCGGERCEHEVLA 300
Query: 426 LSKEFEKSSSEVKSEVARPLLPQWLHNAKA-------------------------HDGDD 460
SKE +SS + LP WL A+ H D
Sbjct: 301 SSKERFSASSAADPHQSN--LPPWLQIAEFGSTKGLNVKTKDNGVLLDSSESGSLHKNFD 358
Query: 461 KTAEQTENKDQ----DLIWKQKSQELQKKWNDTCLNQHPNFH--------------PSSL 502
K ++ +D ++ E +K+ D C ++ P+ + P+S
Sbjct: 359 KLSQHLHQRDAITFPTVVGFHCGAEKKKEDTDNCSSKSPSEYINLNSRVPVGMQMMPTSQ 418
Query: 503 GHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERA-VSPL 561
V ++ YNS L + FQ KV+ + GD Q + NM +S + + +SP
Sbjct: 419 SSSPFPAVFMAKQEKYNSKLA--EMFQ-KVE-DHESGD--QRSCNMSNSSVCDGSQMSPT 472
Query: 562 N-SPVRTDLVLGRSKVLESAPEKTHIE-PVKDFLGCISSEPPQN-KLHESQNDQLQK--- 615
+ + V TDL LG + S+P ++ P + + EPP+ SQN L
Sbjct: 473 SVTSVTTDLGLG----IYSSPTSNKLKKPAVQY----TMEPPKEIPSRFSQNFNLADGNI 524
Query: 616 -----------------PLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR 658
+D + K L + L ++V WQ EA A+ T+ K R
Sbjct: 525 LKHSSQSSSCLSFDYCGQVDAKNPKILFEVLSKEVTWQDEALRAIIKTIVCSPTKRVKHR 584
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGA--SPIMIPLGPRRDHEEPEVRVRGKT 716
G GD+W+ F+G DR+GKKK+A +L+EL+ G+ S I + L + + +V+ RGKT
Sbjct: 585 GPNQPGDIWMNFVGSDRLGKKKIAVSLAELLYGSRESFIFVDLS-SEEMKGCDVKFRGKT 643
Query: 717 ALDKI-GEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFIL 775
ALD I GE K+ P SV+ LE++++AD++ + ++ A++ G++ DS+GRE+S+ N +F+
Sbjct: 644 ALDFIVGECCKK-PLSVVFLENVEKADILAQNSLSLAIKTGKISDSHGREVSVNNTMFVF 702
Query: 776 TADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLS-IRGKTTKRRASWLDEEERST--- 831
+ +SL + E+++ G ++++ + G + S + +
Sbjct: 703 SFSDYQNSLMPRGEPSNYSEERILRAKGGGIKIKVEHVIGDIRSQSISVTNNSIHAVPNL 762
Query: 832 ---KPRKETGSGLSFDLNKAADVGDDKDGSHNSSDLTVD-----HEEEHGFTN----RLL 879
RK G DL+ +D +H +S+ +D E E TN +
Sbjct: 763 NILNKRKLIGDDKFHDLHFLSDTAKR---AHTTSNWLLDLNLPAEENEQKQTNDGNSDHV 819
Query: 880 MTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALE 939
T + + QDL + VD +VFKP DF + V I F+ I+G +++I E ++
Sbjct: 820 STENQNLWLQDLCDLVDETVVFKPYDFEALADRVLKVIRSNFNKILGSECALQIQTEVMD 879
Query: 940 KLVGGVWLGRTG--LEDWTEKVLVPSLHQLKLRLPNNATAAT 979
+ + ++ +E+W E+VL +++ R N TA++
Sbjct: 880 QFLAAQYVSDRDREVENWVEEVLCEGFTEVQRRY--NLTASS 919
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 113/179 (63%), Gaps = 15/179 (8%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M ++ +Q LTP+AA L+ +++ A RR H QTT LH + LL+ P LR AC ++
Sbjct: 1 MPTPVAAARQCLTPDAARALDEAVSVARRRGHAQTTSLHAVSALLSLP--LLRDACSRAR 58
Query: 61 PNSSHP-LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
+ P LQ +AL+LC SV+L+R P++ + S DPPISN+LMAA+KR+QA+QRR P+
Sbjct: 59 NCAYSPRLQFKALDLCLSVSLDRAPSSHNHASSDHDPPISNSLMAAIKRSQANQRRH-PD 117
Query: 120 Q---------QQQPL--LAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSL 167
QQQP +VKVEL+ LI+SILDDP VSRV EA F S +K I + L
Sbjct: 118 NFHFYPHHQTQQQPFSVSSVKVELQHLILSILDDPVVSRVFAEAGFRSSDIKLAILRPL 176
>gi|242061494|ref|XP_002452036.1| hypothetical protein SORBIDRAFT_04g017380 [Sorghum bicolor]
gi|241931867|gb|EES05012.1| hypothetical protein SORBIDRAFT_04g017380 [Sorghum bicolor]
Length = 789
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 126/216 (58%), Gaps = 51/216 (23%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL------ASP------ 48
MRAG T+ Q+LT EAA+VL S+ A RR H Q TPLHVA TLL +SP
Sbjct: 1 MRAGAYTVHQSLTAEAAAVLKLSLGLARRRGHAQVTPLHVAYTLLGVSEPSSSPRLFTTT 60
Query: 49 ----SGYLRQACIKSHPNS-SHPLQCRALELCFSVALERLPTAQQ----NVSPGLD---- 95
G L +AC +S S +HP QCRALELCF+VAL RLPT SP
Sbjct: 61 TPAYGGLLMRACARSRSQSQTHPAQCRALELCFNVALNRLPTGNAAGFGGSSPSTSFAAS 120
Query: 96 ------PPISNALMAALKRAQAHQRRGC--------------------PEQQQQPLLAVK 129
P +SNAL+AALKRAQA+QRRGC P QQQ +L +K
Sbjct: 121 LLQQPSPTLSNALVAALKRAQANQRRGCVELQSQPSPPAPGPQPQSTSPSQQQPTMLTIK 180
Query: 130 VELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ 165
VEL+QLIISILDDPSVSRVMREA FSS AVK +E+
Sbjct: 181 VELDQLIISILDDPSVSRVMREAGFSSAAVKTNLEE 216
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 210 EMVVRESLAKIESKELDGVLKNVQIIRLDKDFT----CDKAGIVSKLKDLGALIETKFGN 265
E V E + ++E ++ L+ +++RL +A + + + DL + G
Sbjct: 323 EASVAELMRRMERGDVPDELRGARVLRLHLSHVHVRLMTRADVDAWVADLRRSVGAATGT 382
Query: 266 ---GDGVILDLGDLKWLVEQQVT-SFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGG 321
G G+++ +GD++W V+ + G + L + LA ++ E+ +L A G GG
Sbjct: 383 DNTGAGLVIYVGDMRWAVDSNDDDARGFSPAAHLAAE---LARLLGEL-RLRAASHGHGG 438
Query: 322 RLWLIGTATCETYLRCQVYHPSMENDWDLQAVPI 355
R WL+ A+ T++RCQ S+E WDLQ V +
Sbjct: 439 RAWLVAAASYGTFMRCQ--RSSLEVTWDLQPVSV 470
>gi|42571145|ref|NP_973646.1| heat shock-related protein [Arabidopsis thaliana]
gi|330254692|gb|AEC09786.1| heat shock-related protein [Arabidopsis thaliana]
Length = 910
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 205/442 (46%), Gaps = 75/442 (16%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M ++ +Q LT EA+ L ++ A RR H QTT LH + LL+ P+ LR AC +
Sbjct: 1 MPTAVNVAKQCLTAEASYALEEAVNVARRRGHSQTTSLHAISALLSLPTSVLRDACARVR 60
Query: 61 PNSSHP-LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
++ P LQ +AL+LC SV+L+R+ + Q + PP+SN+LMAA+KR+QAHQRR PE
Sbjct: 61 NSAYSPRLQFKALDLCLSVSLDRIQSGHQ-LGSDDSPPVSNSLMAAIKRSQAHQRR-LPE 118
Query: 120 -----------QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN 168
Q Q L VKVEL QLI+SILDDP VSRV EA F S +K +I + +
Sbjct: 119 NFRIYQEMSQSQNQNSLSCVKVELRQLILSILDDPVVSRVFGEAGFRSSELKLSIIRPVP 178
Query: 169 SSCSVSNSSPIGL--------------GFRPSSRNLYMNPRLQQAGGVCGGQS--EPEM- 211
S+ P+ L GF S N + ++ V P +
Sbjct: 179 HLLRYSSQQPLFLCNLTGNPEPNPVRWGFTVPSLNFNGDLDYRRISAVFTKDKGRNPLLV 238
Query: 212 ------VVRESLAKIESKELDGV-----LKNVQIIRLDKDFT------CDKAGIVSKLKD 254
V+ L +E + DG+ L + + + + + DK ++ D
Sbjct: 239 GVSAYGVLTSYLNSLEKNQTDGMILPTKLHGLTAVNIGSEISDQISVKFDKTYTDTRFHD 298
Query: 255 LGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVA 314
LG L E G+G G++L GDL+ + VP + +V I +L+
Sbjct: 299 LGKLAEQ--GSGPGLLLHYGDLRVFTNGEG---NVPAANY----------IVNRISELLR 343
Query: 315 RFGGGGGRLWLIGTATC-ETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGI 373
R G R+WLIG T E Y + P++E DWDLQ + I + P L N
Sbjct: 344 RH---GRRVWLIGATTSNEVYEKMMRRFPNVEKDWDLQLLTITSLKPC------LPHNK- 393
Query: 374 LSSSVESLSPLKSAFQTTAAAL 395
SS + S P F TT + L
Sbjct: 394 -SSLIGSFVPFGGFFSTTPSEL 414
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 209/438 (47%), Gaps = 80/438 (18%)
Query: 565 VRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKR 624
V TDL L S V + K H++ KDF S+P + N + L+ +SFK
Sbjct: 489 VTTDLNLRVSSVTTGSGLKKHLDS-KDF-----SQPQSVSSYSFDN---PRDLNAESFKI 539
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
+ + L + V Q EAA ++ ++Q +R D+WL +GPD VGK++M+
Sbjct: 540 IYRRLTDMVSGQDEAARVISCALSQPPKSVTRR-------DVWLNLVGPDTVGKRRMSLV 592
Query: 685 LSELV--SGASPIMIPLGPRRDH----EEPEVRVRGKTALDKIGEAVKRNPFSVILLEDI 738
L+E+V S + + LG ++P +R+RGKT +D I E + RNPF V+ LE+I
Sbjct: 593 LAEIVYQSEHRFMAVDLGAAEQGMGGCDDP-MRLRGKTMVDHIFEVMCRNPFCVVFLENI 651
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQG----ITLD 794
++AD ++ ++ +A+E G+ +DS+GRE+ +GN IF++T+ SQG +
Sbjct: 652 EKADEKLQMSLSKAIETGKFMDSHGREVGIGNTIFVMTSS---------SQGSATTTSYS 702
Query: 795 EKKLTSLASGEWQLRL----------SIRGKTT--KRRASWL------DEEERSTKPRKE 836
E+KL + + ++R+ S+ G T+ KR+ L + S K
Sbjct: 703 EEKLLRVKGRQVEIRIETVSSLPMVRSVYGPTSVNKRKLMGLGNLQETKDTVESVKRLNR 762
Query: 837 TGSGLSFDLNKAADVGDDKDGSH--NSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNS 894
T +G+ DLN A + ++ H +S++ + + + H RL+ P
Sbjct: 763 TTNGV-LDLNLPAQETEIEEKYHCEENSNVWLMNLKNH---KRLIEVP------------ 806
Query: 895 VDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWL--GRTGL 952
FKP DF + + ++ + F + +E+ + +E+L+ V+ R +
Sbjct: 807 ------FKPFDFEGLAEKIKKSVKENFDKCVRSDCLLEVDPKIIERLLAAVYFSDSRKDI 860
Query: 953 EDWTEKVLVPSLHQLKLR 970
++ E ++ P ++K R
Sbjct: 861 KELLENIMSPVFLRIKER 878
>gi|224112499|ref|XP_002316210.1| predicted protein [Populus trichocarpa]
gi|222865250|gb|EEF02381.1| predicted protein [Populus trichocarpa]
Length = 468
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 224/475 (47%), Gaps = 90/475 (18%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M ++T +Q LT EA L+ ++ A RR HGQTT LH + LL+ PS LR AC ++
Sbjct: 1 MPTPVTTARQCLTEEAGHALDEAVNVARRRGHGQTTSLHAVSALLSLPSSPLRDACARAR 60
Query: 61 PNSSHP--LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCP 118
NS++ LQ +ALELC V+L+R+PT+Q + PP+SN+LMAA+KR+QA+QRR P
Sbjct: 61 -NSAYSSRLQFKALELCLGVSLDRVPTSQLSDD---SPPVSNSLMAAIKRSQANQRRQ-P 115
Query: 119 EQ-------------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ 165
E + +KVEL+ LI+SILDDP VSRV EA F S +K I +
Sbjct: 116 ENFNLYHQIQQQQQQSSSSISCIKVELQNLILSILDDPVVSRVFGEAGFRSSEIKLAIVR 175
Query: 166 SLNSSCSVSNSS----PI---------------------GLGFRPSSRNLYMNPRLQQAG 200
L S+S P+ G+ P S L++N
Sbjct: 176 PLPQVFKFSSSRFKGPPLFLCNLLSSEDPDSLYSGPGRRGVFSFPFSGGLFLNNNSNNNN 235
Query: 201 GVCGGQSEPEMVVRE-----------------SLAKIESKELDGVLK----NVQIIRLDK 239
G + E++ R S +++ K + VL + +I ++
Sbjct: 236 GDANCRRIGEVLARNKGRNPLLVGLSAYHTLASFSEMVEKRKENVLPVELCGLSVICMES 295
Query: 240 DF-------TCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNS 292
D DK + + ++LG +E G G++ + GDLK V + G+ ++
Sbjct: 296 DVNKFITSENFDKKCVDLRFEELGQFVEKSL--GPGLLANFGDLKAFVSNDDHNNGMDDA 353
Query: 293 GTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQA 352
++ V+ ++ KL+ + GGR+WLIG A+ E Y + PS E DWDLQ
Sbjct: 354 ---------VSYVIEKLTKLLQLY---GGRVWLIGAASYENYSKFVGRFPSTEKDWDLQL 401
Query: 353 VPIAA-KTP-LSGMFPRLGSNGI-LSSSVESLSPLKSAFQTTAAALPRRVSENLD 404
+PI + +TP ++ +P L + + + S L + + LPR +S D
Sbjct: 402 LPITSLRTPSVAESYPSLMESFVPFGGFFSTPSDLNAPLNRSCKYLPRFISSVAD 456
>gi|18405278|ref|NP_030558.1| heat shock-related protein [Arabidopsis thaliana]
gi|15450731|gb|AAK96637.1| At2g40130/T7M7.2 [Arabidopsis thaliana]
gi|20334718|gb|AAM16220.1| At2g40130/T7M7.2 [Arabidopsis thaliana]
gi|330254691|gb|AEC09785.1| heat shock-related protein [Arabidopsis thaliana]
Length = 491
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 205/442 (46%), Gaps = 75/442 (16%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M ++ +Q LT EA+ L ++ A RR H QTT LH + LL+ P+ LR AC +
Sbjct: 1 MPTAVNVAKQCLTAEASYALEEAVNVARRRGHSQTTSLHAISALLSLPTSVLRDACARVR 60
Query: 61 PNSSHP-LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
++ P LQ +AL+LC SV+L+R+ + Q + PP+SN+LMAA+KR+QAHQRR PE
Sbjct: 61 NSAYSPRLQFKALDLCLSVSLDRIQSGHQ-LGSDDSPPVSNSLMAAIKRSQAHQRR-LPE 118
Query: 120 -----------QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN 168
Q Q L VKVEL QLI+SILDDP VSRV EA F S +K +I + +
Sbjct: 119 NFRIYQEMSQSQNQNSLSCVKVELRQLILSILDDPVVSRVFGEAGFRSSELKLSIIRPVP 178
Query: 169 SSCSVSNSSPIGL--------------GFRPSSRNLYMNPRLQQAGGVCGGQS--EPEM- 211
S+ P+ L GF S N + ++ V P +
Sbjct: 179 HLLRYSSQQPLFLCNLTGNPEPNPVRWGFTVPSLNFNGDLDYRRISAVFTKDKGRNPLLV 238
Query: 212 ------VVRESLAKIESKELDGV-----LKNVQIIRLDKDFT------CDKAGIVSKLKD 254
V+ L +E + DG+ L + + + + + DK ++ D
Sbjct: 239 GVSAYGVLTSYLNSLEKNQTDGMILPTKLHGLTAVNIGSEISDQISVKFDKTYTDTRFHD 298
Query: 255 LGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVA 314
LG L E G+G G++L GDL+ + VP + +V I +L+
Sbjct: 299 LGKLAEQ--GSGPGLLLHYGDLRVFTNGEG---NVPAAN----------YIVNRISELLR 343
Query: 315 RFGGGGGRLWLIGTATC-ETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGI 373
R G R+WLIG T E Y + P++E DWDLQ + I + P L N
Sbjct: 344 RH---GRRVWLIGATTSNEVYEKMMRRFPNVEKDWDLQLLTITSLKPC------LPHNK- 393
Query: 374 LSSSVESLSPLKSAFQTTAAAL 395
SS + S P F TT + L
Sbjct: 394 -SSLIGSFVPFGGFFSTTPSEL 414
>gi|413936868|gb|AFW71419.1| hypothetical protein ZEAMMB73_805690 [Zea mays]
Length = 831
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 127/230 (55%), Gaps = 66/230 (28%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL--------------- 45
MRAG T+ Q+LT EAA+ L S+ A RR H Q TPLHVA TLL
Sbjct: 1 MRAGAYTVHQSLTAEAAAALQLSLGLARRRGHAQVTPLHVAYTLLGGSEPPPSSSSPRLF 60
Query: 46 ------ASPSGYLRQACIKSHPNSSHPLQ-CRALELCFSVALERLPTAQQNV-------S 91
A G L +AC +S +HP Q CRALELCF+VAL RLPT N S
Sbjct: 61 TTIAASAPAYGLLVRACARSR-RQTHPAQQCRALELCFNVALNRLPTGTANAGGLGSSPS 119
Query: 92 PGLD------------PPISNALMAALKRAQAHQRRGCPE-------------------- 119
P P +SNAL+AALKRAQA+QRRGC E
Sbjct: 120 PATSFAASLLQQQPASPTLSNALVAALKRAQANQRRGCVELQSQPSPPPPPPGQQPHSTT 179
Query: 120 ----QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ 165
QQQQP+L +KVEL+QLI+SILDDPSVSRVMREA FSS AVKA++E+
Sbjct: 180 SPSHQQQQPVLTIKVELDQLIVSILDDPSVSRVMREAGFSSAAVKASLEE 229
>gi|242067491|ref|XP_002449022.1| hypothetical protein SORBIDRAFT_05g003570 [Sorghum bicolor]
gi|241934865|gb|EES08010.1| hypothetical protein SORBIDRAFT_05g003570 [Sorghum bicolor]
Length = 883
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 197/409 (48%), Gaps = 86/409 (21%)
Query: 29 RRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALERLPTAQQ 88
RR H Q TPLHVA+ +L S +G LR AC++SH SHPLQC+ALELCF+VAL RLPTA
Sbjct: 29 RRGHAQVTPLHVASAML-SAAGLLRAACLRSH---SHPLQCKALELCFNVALNRLPTAGP 84
Query: 89 NVSPGLDPP-----------------ISNALMAALKRAQAHQRRGCPEQQQQPL------ 125
+ + P +SNAL+AA KRAQAHQRRG E Q
Sbjct: 85 AAAAVMFHPHHHHHHAGHGQQHAVPVLSNALVAAFKRAQAHQRRGVVEGVQGQGQGQAPA 144
Query: 126 -------LAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNS--------- 169
LA KV++EQLIISILDDPSVSRVMREA FSS VKA +E++++
Sbjct: 145 QPPPQPVLAAKVDIEQLIISILDDPSVSRVMREAGFSSSQVKANVEKAVSLSSSSSLPDH 204
Query: 170 --SCSVSNSSPIGLGFRPSSRNLYMNPRLQQAGG-----------------------VCG 204
+ ++ S G + + + + R AGG V
Sbjct: 205 QPNTTIPPSGAHATGSPAAGGSGHASSRRPNAGGNKADDDDAMRVLDCMASGTKRCVVVV 264
Query: 205 GQSE--PEMVVRESLAKIESKELDG---VLKNVQIIRLD-KDFT-CDKAGIVSKLKDLGA 257
G+S E+VV+ + ++ EL LKNVQ + L F + + +K DL A
Sbjct: 265 GESAATAEVVVKSVMDRVSKGELQQRHERLKNVQFVPLSAASFQRMPREEVEAKAGDLRA 324
Query: 258 LIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQV-----LAEVVAEIGKL 312
L+ G GV+L L DL + + G++ ++ + V E+G L
Sbjct: 325 LVRQGCAAGKGVVLVLEDLAFAADAWAAVSERRRHGSVGREHGQCGYCPVEHAVMEVGSL 384
Query: 313 VARFGGGGG------RLWLIGTATCETYLRCQVYHPSMENDWDLQAVPI 355
V+ GGGG R WL+G + Y++ + PS+E W+L V +
Sbjct: 385 VSAAAGGGGGGRGLDRFWLLGFGNNQAYMKSRAGQPSLEAVWELHPVVV 433
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 617 LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR---GAGSKGDMWLLFMGP 673
L ++ K L +L + ++ A+ +A+ V QC+ G +RR WLLF G
Sbjct: 624 LTAENLKILCNALENRAPHHKDVATEIASVVLQCRSGMTRRRWWFQEKPSAVTWLLFQGG 683
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRD---HE--------EPEVRVR-----GKTA 717
GKK + L+ LV G+ + D H EP ++ + G
Sbjct: 684 GNDGKKAVCQELARLVFGSYSKFTSISLADDEFTHHVHSDSSSGEPMLKRQRSLDTGHGY 743
Query: 718 LDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTA 777
+ ++ +A+ ++P VI+++ +++ D I+ A+ GR+ G EISLG+ I +L+
Sbjct: 744 IQRLYDAILKSPHRVIMIDGVEQLDYESEIGIRNAITNGRIRGCNGDEISLGDAIIVLSC 803
Query: 778 DWLPDSL 784
+ L DS+
Sbjct: 804 EAL-DSM 809
>gi|168010434|ref|XP_001757909.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690786|gb|EDQ77151.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1030
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 115/171 (67%), Gaps = 2/171 (1%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MR+G + +Q TL+ A VL +I+ A R H Q PLHVA LLA LRQAC +H
Sbjct: 1 MRSGAAAVQNTLSLPAQQVLRQAISAARERGHAQVQPLHVAFVLLAHGDPVLRQACADTH 60
Query: 61 PNSSHPL-QCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
+ H L QC ALELCF+VAL+RL + S +SNAL+AALKRAQA Q+RGCP+
Sbjct: 61 SQTLHGLHQCHALELCFNVALDRLQQCSSSGSTVNLLGLSNALVAALKRAQAQQKRGCPD 120
Query: 120 QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSS 170
QQQ PL+ +KVELE +IISIL+DPSVSRVM EA F S VK IE +++ S
Sbjct: 121 QQQAPLV-MKVELEMVIISILEDPSVSRVMEEAGFFSQQVKTNIENAMSLS 170
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 194/422 (45%), Gaps = 63/422 (14%)
Query: 596 ISSEPPQNKLHE--SQNDQLQKPLD---PDSFKRLLKSLMEKVWWQQEAASAVATTVTQC 650
I+ +PP ++L + ++ DQ D D K + K LMEKV WQ +A S ++T +
Sbjct: 569 IADKPPLSQLVDISAKIDQHSVFFDHKTADRLKYVHKGLMEKVVWQGKAISTISTFIVNA 628
Query: 651 KLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGP-------RR 703
+ G G+ RG +K WLL +GPD+VGK+ +A AL+ELV G + I G R+
Sbjct: 629 QTGRGELRGGAAKAGTWLLLLGPDQVGKRLIAGALAELVVGVAAKPIYFGDLGYSRWGRK 688
Query: 704 DHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYG 763
E ++ RG+TA+D I +A++ P SV+LLEDID+A V+R + RAM G+ DS G
Sbjct: 689 VEEIDGMQYRGRTAVDSIADALRAKPLSVLLLEDIDQAVSVIRTKLMRAMVTGKFSDSNG 748
Query: 764 REISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRL------------- 810
+S+GN I I+T+ +S + E +L S+ L L
Sbjct: 749 GHVSVGNSIIIMTSRLGANSNLGKGKENIFSEGRLASMHGARMSLLLQPPREKEIVLQGD 808
Query: 811 --------SIR-------------GKTTKRRAS-WLDEEERSTKPRKET---GSGLSFDL 845
+IR G KR+AS +L K +K + G ++ DL
Sbjct: 809 MDISVVRDTIRTSALENPANPMSGGMVLKRKASGFLSRALLGVKRKKVSTPFGRIVALDL 868
Query: 846 NKAADVGDDKDGSHNSSDLTVDHEE---EHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFK 902
N +A+ + ++ HEE G ++ +L S + VD ++F+
Sbjct: 869 NLSAE-----ENEAVLAETVTSHEEIATNIGVSDPVLRA-VQEVLSPKFCSLVDETVMFE 922
Query: 903 PVDFGRIRRDVTNAITKKFSSIIGDALS-IEILDEALEKLVGGVWL---GRTGLEDWTEK 958
P D + + +++ S ++ + IE+ + LE +V W GR E W E
Sbjct: 923 PFDLMGLANWILLQLSRACSGLVPKFCTRIEVDFQILEHIVSTTWRTPGGRQAFEGWVED 982
Query: 959 VL 960
L
Sbjct: 983 KL 984
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 22/102 (21%)
Query: 408 RMSCCRQCLQNYE--------QELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGD 459
++ CC +C ++ QE AK S ++SS+E EV LP WL G
Sbjct: 254 KLICCSECTDHFNMEYNQIRVQESAKASTVRKQSSTE--DEVVVSSLPSWLQK-----GK 306
Query: 460 DKTAEQTENKDQDL-------IWKQKSQELQKKWNDTCLNQH 494
D EQ D Q+ QEL++KW C N H
Sbjct: 307 DMKTEQISLTSSDFDVQERHHSLSQRIQELRRKWQFVCSNSH 348
>gi|168026262|ref|XP_001765651.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683077|gb|EDQ69490.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1118
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 192/419 (45%), Gaps = 81/419 (19%)
Query: 613 LQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMG 672
L+ +D + K L K LM++V WQ A + +ATTV +C+ G G RGA +K D WLL +G
Sbjct: 669 LKDVVDDPTLKGLYKGLMQRVPWQAAAVAGIATTVMKCRSGMGSFRGATAKTDTWLLLLG 728
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLG------PRRDHEEPEVRVRGKTALDKIGEAVK 726
PD V K +A AL+E+V G ++ +G R + ++ +R RGKT LD++ EAV+
Sbjct: 729 PDPVAKVAIAKALAEMVFGGERSLLHIGFADGSPARLEGDDSGMRYRGKTPLDRLAEAVR 788
Query: 727 RNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKF 786
P SVILLEDID+A V + N+ RAMERG+L DS RE+SL N I ++T +
Sbjct: 789 LKPSSVILLEDIDKATSVFKNNVVRAMERGKLADSSMREVSLSNSIIVMTTSVGSVDCEP 848
Query: 787 LSQ--GITLDEKKLTSLASGEWQLRL-----------SIRGK------------------ 815
+ + ++ E KL +L E +R+ S K
Sbjct: 849 VERLGALSFSEAKLAALKRAEICVRIKHSSSEKIVFKSANNKIVVVDHGEEEQKKFVETT 908
Query: 816 ----------TTKRRASWLDEEERSTKPRKETGSG----LSFDL------NKAADVGDDK 855
T +++ S+L E RS K T SG L+ DL NK G+
Sbjct: 909 SSPLEVPLWVTKRKQDSFLQGELRSKFDAKRTKSGQGRFLNLDLNLSTGENKGCWTGETD 968
Query: 856 DGSHNSSDLTVDHEE-------EHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGR 908
D H +D D EE EH RL++T D A+ F P DF
Sbjct: 969 D--HCVTDF--DAEEVKRKKVLEH---VRLMLT-------DKFCALPDYAVGFDPYDFNG 1014
Query: 909 IRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWL---GRTGLEDWTEKVLVPSL 964
+ ++ N ++K F +E+ LE L+ VW GR W + V S+
Sbjct: 1015 LATEILNTLSKSFEDHSPSEAGVEVDLRLLEYLMSCVWKIPDGRQKFNAWVDDVFSKSI 1073
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 268 GVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIG 327
G IL +GDL+WL E G N Q+ +E+ +L+ R RLW +G
Sbjct: 220 GAILHIGDLQWLAEPMQLKKGPSNFCPAQR-------TASELRQLLIRHASS--RLWFVG 270
Query: 328 TATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKSA 387
AT +T+ R QV +PS+ DW LQ VP++ G P S L++ + L S
Sbjct: 271 VATPQTFSRLQVLYPSLIADWGLQPVPLSI-----GSQPDFLSR--LTNCTRVVHDLHSL 323
Query: 388 FQTTAAAL--PR-------RVSENLDPARRMSCCRQCLQNYEQE 422
T +A++ PR R N P R CC +CL +E+E
Sbjct: 324 HSTPSASVESPRVTLMQDTRPVSNSGPNERFQCCVECLAKFEEE 367
>gi|224098627|ref|XP_002311226.1| predicted protein [Populus trichocarpa]
gi|222851046|gb|EEE88593.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 135/474 (28%), Positives = 220/474 (46%), Gaps = 83/474 (17%)
Query: 563 SPVRTDLVLGRSKV-----LESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQ----- 612
+ V TDL L S V L+ + H+E +D G S+ + +H S +D
Sbjct: 2 TSVTTDLGLRISSVPTSNELKKTVNQNHMELPQDRSGSFSANV--DVVHGSMSDHWAPSS 59
Query: 613 -------LQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGD 665
D + K L ++++E+V WQ EA ++ T+ +CK N KR+GA +GD
Sbjct: 60 SSSSSPDYGGQFDLSNAKMLFRAVVERVGWQDEAIRVISQTIARCKARNEKRQGASLRGD 119
Query: 666 MWLLFMGPDRVGKKKMASALSELVSG-----------ASPIMIPLGPRRDHEEPE---VR 711
+W F GPDR GKKK+ASAL+E++ G A MI DH E V+
Sbjct: 120 IWFSFCGPDRRGKKKIASALAEIIYGSRENFISADLSAQDGMIHTHMLFDHPEVNGYTVK 179
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
+RGKT +D + + + P S++ LE+ID+AD+ + ++ A++ G+ DS+GREI + N
Sbjct: 180 LRGKTVVDFVAGELCKKPLSIVFLENIDKADVQAQKSLSHAIQTGKFADSHGREIGISNA 239
Query: 772 IFILTADWLPDSL-KFLSQGITLDEKKLTSLASGEWQLRLSIR-------GKTT------ 817
IF+ T+ D + +++ T E++++ + +W +++ I GK
Sbjct: 240 IFVTTSTLTEDKVCSSINEFSTYSEERISRVR--DWPVKILIEQALDDEVGKMVAPFTLR 297
Query: 818 ----------KRRASW----LDEEE-RSTKPRKETGSGLSFDLNKAADVGDDKDGSHNSS 862
KR+ LD +E + R S + DLN A+ D D SS
Sbjct: 298 KGVSGSIFLNKRKLVGANQNLDRQEIKEMVKRAHKTSARNLDLNLPAEENDVLDTDDGSS 357
Query: 863 DLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFS 922
D +H N + QD L +D+ + FKP DF + + N + F
Sbjct: 358 D------NDHASDN-------SKAWLQDFLEKIDARVFFKPFDFDALAERILNELNGCFH 404
Query: 923 SIIGDALSIEILDEALEKLVGGVWLG--RTGLEDWTEKVL----VPSLHQLKLR 970
I+G ++I + E+L+ +L + +EDW E+VL V L + KL+
Sbjct: 405 KIVGSECLLDIDPKVTEQLLAAAYLSDRKRVVEDWVEQVLGWGFVEVLRRYKLK 458
>gi|255591162|ref|XP_002535454.1| conserved hypothetical protein [Ricinus communis]
gi|223523058|gb|EEF26929.1| conserved hypothetical protein [Ricinus communis]
Length = 398
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 207/420 (49%), Gaps = 89/420 (21%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +S +Q LT EAA L +++ A RR+H QTT LH + LLA PS LR AC ++
Sbjct: 1 MPTPVSVARQCLTDEAARALQDAVSVARRRSHAQTTSLHAVSALLALPSSTLRDACARAR 60
Query: 61 --PNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD-PPISNALMAALKRAQAHQRRGC 117
P SS LQ RALELC V+L+RLP+++ LD PPISN+LMAA+KR+QA+QRR
Sbjct: 61 KSPCSSR-LQFRALELCVGVSLDRLPSSK-----ALDEPPISNSLMAAIKRSQANQRRH- 113
Query: 118 PEQ--------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK-ATIEQSLN 168
P+ QQP +KVEL+ I+SILDDP VSRV+ EA F S +K A I +
Sbjct: 114 PDNFHLQQIHCNQQPPSVLKVELKHFILSILDDPIVSRVLGEAGFRSCDIKLAIIHPPIT 173
Query: 169 SSCSVSNSS---PI-------------GLGFRPSSRNLYMNPRLQQAG------------ 200
S S PI G G+ S + + ++ G
Sbjct: 174 QPPKFSRSRCPPPIFLCNLNGSDVGRGGHGYPFSGYDDRGDENCRRIGEKLGKVKSLLLL 233
Query: 201 GVC-----------------GGQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFTC 243
GVC GG P +V S+ IE + ++ V + DK+
Sbjct: 234 GVCASDALSRFIECVNSDNKGGFLLPREIVGLSVVSIEKEIIEFVSEGGN----DKEKAK 289
Query: 244 DKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLA 303
+K G K ++L +E G GV+L+ G+LK LV++ V S +
Sbjct: 290 EKMGF--KFEELRNKLEQCLGV--GVVLNFGELKVLVDENVFS------------SDAAS 333
Query: 304 EVVAEIGKLVARFGGGGGRLWLIG-TATCETYLRCQVYHPSMENDWDLQAVPI-AAKTPL 361
+V ++ L+ F +LWL+G AT ETY + PS+E DWDL +PI ++K+P+
Sbjct: 334 YLVEKLTGLLEDF---RNKLWLMGAAATYETYSKFLGKFPSIEKDWDLHLLPITSSKSPI 390
>gi|297823931|ref|XP_002879848.1| hypothetical protein ARALYDRAFT_483058 [Arabidopsis lyrata subsp.
lyrata]
gi|297325687|gb|EFH56107.1| hypothetical protein ARALYDRAFT_483058 [Arabidopsis lyrata subsp.
lyrata]
Length = 908
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 214/448 (47%), Gaps = 87/448 (19%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M ++ +Q LT EAA L ++ A RR H QTT LH + LL+ P+ LR AC +
Sbjct: 1 MPTAVNVAKQCLTAEAAYALEEAVNVARRRGHSQTTSLHAISALLSLPTSVLRDACARVR 60
Query: 61 PNSSHP-LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
++ P LQ +AL+LC SV+L+R+ + QQ + PP+SN+LMAA+KR+QAHQRR PE
Sbjct: 61 NSAYSPRLQFKALDLCLSVSLDRIQSGQQ-LGSDDSPPVSNSLMAAIKRSQAHQRR-LPE 118
Query: 120 Q-----------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSL- 167
L VKVEL QLI+SILDDP VSRV EA F S +K +I + +
Sbjct: 119 NFRIYQEMSQSQNSNSLSCVKVELRQLILSILDDPVVSRVFGEAGFRSSELKLSIIRPVP 178
Query: 168 ----NSS------CSVSNS---SPIGLGFRPSSRNL------------YM-----NPRL- 196
SS C+V+ + +P+ GF +RN +M NP L
Sbjct: 179 HLLRYSSQQPLFLCNVTGNPEPNPVRWGFTVPNRNFNGDSDYRRISAVFMREKGRNPLLV 238
Query: 197 -QQAGGVCGG-------QSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFTCDKAGI 248
A GV G M++ L + + ++ + + I++ DK +T
Sbjct: 239 GVSAYGVLTGYLNSLEKNRTDGMILPTKLHGLTAVDIGSEISDQIIVKFDKTYT------ 292
Query: 249 VSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAE 308
++ DLG L E G+G G+IL+ GDL+ + + VP + +V
Sbjct: 293 DTRFHDLGKLAEQ--GSGPGLILNYGDLRVFTDGE---GNVPAANY----------IVNR 337
Query: 309 IGKLVARFGGGGGRLWLIGTATC-ETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPR 367
+ +L+ R G R+WLIG T + Y + P++E DWDLQ + I + P P
Sbjct: 338 VSELLRRH---GRRVWLIGATTSNDVYEKMLRKFPNVEKDWDLQLLTITSLKPC---LPH 391
Query: 368 LGSNGILSSSVESLSPLKSAFQTTAAAL 395
SS + S P F TT + L
Sbjct: 392 HK-----SSLIGSFVPFGGFFSTTPSDL 414
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 203/434 (46%), Gaps = 71/434 (16%)
Query: 565 VRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKR 624
V TDL L V + K H++ KDF S+P + N + L +SFK
Sbjct: 486 VTTDLNLRICSVTAGSGLKKHLDS-KDF-----SQPQSVSSYCLDN---PRDLSAESFKI 536
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
+ + L ++V Q EAA ++ ++Q +R D+WL +GPD VGK++M+
Sbjct: 537 IYRRLTDRVSGQDEAARVISCALSQPPKIVTRR-------DVWLNLVGPDTVGKRRMSLV 589
Query: 685 LSELV--SGASPIMIPLGPRR---DHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDID 739
L+E+V S + + LG D + +R+RGKT +D I E + RNPF V+ LE+I+
Sbjct: 590 LAEIVYQSEHRYMAVDLGAAEHGMDGCDDAMRLRGKTMVDHIFEVMCRNPFCVVFLENIE 649
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGI--TLDEKK 797
+AD ++ ++ +A+E G+ +DS+GRE+ +GN +F++T+ DS GI + E+K
Sbjct: 650 KADEKLQISLSKAIETGKFMDSHGREVGIGNTMFVMTSSSPEDS------GIRTSYSEEK 703
Query: 798 LTSLASGEWQLRL----------SIRGKTT--KRRASWL-------DEEERSTKPRKETG 838
L + ++ + S+ G T+ KR+ L D E + + T
Sbjct: 704 LLRAKGRQVEIWIETVPSLPMVRSVYGPTSVNKRKLMGLGKLQETKDTVETVKRWNRTTN 763
Query: 839 SGLSFDLNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSA 898
L +L ++KD +S++ + + + H RL+ P
Sbjct: 764 GVLDLNLPAQETEIEEKDHCEENSNVWLMNLKNH---ERLIEVP---------------- 804
Query: 899 IVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWL--GRTGLEDWT 956
FKP DF + + ++ + F + +E+ + +E+L+ V+ R +++
Sbjct: 805 --FKPFDFEGLAEKIKKSVKEIFDKCVRSDCLLEVDPKIIERLLAAVYFSDSRKDIKELM 862
Query: 957 EKVLVPSLHQLKLR 970
EK++ ++K R
Sbjct: 863 EKIMSRVFLKIKER 876
>gi|224112493|ref|XP_002316209.1| predicted protein [Populus trichocarpa]
gi|222865249|gb|EEF02380.1| predicted protein [Populus trichocarpa]
Length = 628
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 205/439 (46%), Gaps = 69/439 (15%)
Query: 617 LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRV 676
DP + K L ++++E+V WQ EA ++ T+ C+ N KR+GA +GD+W F GPDR
Sbjct: 211 FDPSNAKMLFRAVVERVGWQDEAIRIISQTIAHCRAINEKRQGASLRGDIWFSFCGPDRC 270
Query: 677 GKKKMASALSELVSGASPIMIP--------LGPRRDHEEPE-----VRVRGKTALDKIGE 723
GKKK+ASAL+E++ G+ I + + PE V+ RGKT +D +
Sbjct: 271 GKKKIASALAEVIYGSRENFISADLSSQDGMVAHMVFDRPEMSGYTVKFRGKTMVDFVAG 330
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDS 783
+ + P S++ LE+ID+AD+ + ++ +A++ G+ DS+GRE+ + N IF+ T+ D
Sbjct: 331 ELCKKPLSIVFLENIDKADVQAQKSLSQAIQTGKFADSHGREVGISNAIFVTTSTLTEDK 390
Query: 784 LKFLSQGI-TLDEKKLTSLASGEWQLRLSIR-------GKT----------------TKR 819
+ S T E+++ L + +W +++ I G+ KR
Sbjct: 391 VGSSSNDFSTYSEERI--LKAKDWPMKILIERVLDEEMGQVITPITAKKDIPSSIFLNKR 448
Query: 820 RASW----LDEEERSTK-PRKETGSGLSFDLNKAA---DVGDDKDGSHNSSDLTVDHEEE 871
+ LD +E + R S + DLN A D+ D DG+ D++ E
Sbjct: 449 KLVGANQNLDRQEITEMVKRAHKMSARNLDLNLPAGENDLPDTDDGNS-------DNDPE 501
Query: 872 HGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSI 931
+ L Q L VD+ + FKP DF + + N + F I+G +
Sbjct: 502 SDISKAWL---------QGFLEQVDARVFFKPFDFDALAERILNEVNGCFHKIVGWECLL 552
Query: 932 EILDEALEKLVGGVWLGRTG--LEDWTEKVLVPSLHQLKLRLPNNATAATDESATVRLEL 989
+I + +E+L+ +L +EDW E+VL ++ R NA + A L L
Sbjct: 553 DIDPKVMEQLLAATYLSDQNRVVEDWVEQVLGWGFVEVLRRHSLNANSIVKLVACKSLFL 612
Query: 990 DDGSGSRSHGELLPSSIRV 1008
+ R G LP+ I +
Sbjct: 613 E----GRMPGVYLPTKIII 627
>gi|414869079|tpg|DAA47636.1| TPA: hypothetical protein ZEAMMB73_303998 [Zea mays]
Length = 1033
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 128/218 (58%), Gaps = 53/218 (24%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL--------------- 45
MRAG TI Q+L EAA+VL ++A A RR H Q TPLHVA LL
Sbjct: 1 MRAGAYTIHQSLNAEAAAVLKLALALARRRGHAQVTPLHVAFALLTGPAAAAACMQPLAA 60
Query: 46 -------ASPSGYLRQACIKSHPNSS---------HPLQCRALELCFSVALERLPTAQQN 89
A+P G L++AC++SHP HPLQCRALELCF+VAL RLP + +
Sbjct: 61 FYSPASLAAPYGLLKRACLRSHPAPGAASSHGAPQHPLQCRALELCFNVALNRLPASGPH 120
Query: 90 VSPGL------------DPPISNALMAALKRAQAHQRRGCPE----------QQQQPLLA 127
P P +SNAL+AALKRAQA+QRRGC E Q QPLLA
Sbjct: 121 SPPSSMTAPFTSPLIQPSPTLSNALVAALKRAQANQRRGCVELPQPPPPANAPQPQPLLA 180
Query: 128 VKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ 165
+KVELEQL+ISILDDPSVSRVMREA FSS VK +E+
Sbjct: 181 IKVELEQLVISILDDPSVSRVMREAGFSSATVKNNLEE 218
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 128/311 (41%), Gaps = 48/311 (15%)
Query: 207 SEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFT----CDKAGIVSKLKDLGALIE-T 261
S E V E L +E ++ L +++L + +A + ++ +L ++
Sbjct: 303 SMAEAVAGELLRCLERGDVPEALAGAHLLKLQLSYVHVRLMSRADVNARASELRRSVDAV 362
Query: 262 KFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGG 321
+ G G+++ +GDL+W ++++ N + +VAE+G+L+
Sbjct: 363 QLQRGGGLVVCVGDLRWALDEEA------NDNHAVSSYSPVEHMVAELGRLLDDLRASRV 416
Query: 322 RLWLIGTATCETYLRCQVYHPS-MENDWDLQA--VPIAAKTPLS-GMFPRLGSNGILSSS 377
R WL+ TA+ +TY+R Q +E+ W LQA VP + + LS + S+ L S+
Sbjct: 417 RAWLVATASYQTYMRWQQRRRRPLESAWALQAVVVPTGSGSGLSLNILHSTSSSTSLPSA 476
Query: 378 VESLSPLKSAFQ-------TTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEF 430
+ P +A Q A + + ++ C +C +NYE E A L K
Sbjct: 477 SAGVPPATAASQQLGQNPFAMAGSATEFAGRDEQDEMQLVLCTECTRNYESE-ASLVK-- 533
Query: 431 EKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTC 490
+E E R L WL DG + + LI EL++KW+ C
Sbjct: 534 ----AEDDVEGPRASLAGWL----VLDGPSQ---------KYLI------ELKRKWSRLC 570
Query: 491 LNQHPNFHPSS 501
H P S
Sbjct: 571 GKLHLCSDPCS 581
>gi|414587732|tpg|DAA38303.1| TPA: hypothetical protein ZEAMMB73_613010 [Zea mays]
Length = 1040
Score = 159 bits (401), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 128/218 (58%), Gaps = 53/218 (24%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL--------------- 45
MRAG TI Q+L EAA+VL ++A A RR H Q TPLHVA LL
Sbjct: 1 MRAGAYTIHQSLNAEAAAVLKLALALARRRGHAQVTPLHVAFALLTGPAAAAACMQPLAA 60
Query: 46 -------ASPSGYLRQACIKSHPNSS---------HPLQCRALELCFSVALERLPTAQQN 89
A+P G L++AC++SHP HPLQCRALELCF+VAL RLP + +
Sbjct: 61 FYSPASLAAPYGLLKRACLRSHPAPGAASSHGAPQHPLQCRALELCFNVALNRLPASGPH 120
Query: 90 VSPGL------------DPPISNALMAALKRAQAHQRRGCPE----------QQQQPLLA 127
P P +SNAL+AALKRAQA+QRRGC E Q QPLLA
Sbjct: 121 SPPSSMTAPFTSPLIQPSPTLSNALVAALKRAQANQRRGCVELPQPPPPANAPQPQPLLA 180
Query: 128 VKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ 165
+KVELEQL+ISILDDPSVSRVMREA FSS VK +E+
Sbjct: 181 IKVELEQLVISILDDPSVSRVMREAGFSSATVKNNLEE 218
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 132/311 (42%), Gaps = 41/311 (13%)
Query: 207 SEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFT----CDKAGIVSKLKDLGALIE-T 261
S E V E L +E ++ L +++L + +A + ++ +L ++
Sbjct: 303 SMAEAVAGELLRCLERGDVPEALAGAHLLKLQLSYVHVRLMSRADVNARASELRRSVDAV 362
Query: 262 KFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGG 321
+ G G+++ +GDL+W ++++ N + +VAE+G+L+
Sbjct: 363 QLQRGGGLVVCVGDLRWALDEEA------NDNHAVSSYSPVEHMVAELGRLLDDLRASRV 416
Query: 322 RLWLIGTATCETYLRCQVYHPS-MENDWDLQA--VPIAAKTPLS-GMFPRLGSNGILSSS 377
R WL+ TA+ +TY+R Q +E+ W LQA VP + + LS + S+ L S+
Sbjct: 417 RAWLVATASYQTYMRWQQRRRRPLESAWALQAVVVPTGSGSGLSLNILHSTSSSTSLPSA 476
Query: 378 VESLSPLKSAFQ-------TTAAALPRRVSENLDPARRMSCCRQCLQNYEQELAKLSKEF 430
+ P +A Q A + + ++ C +C +NYE E A L K
Sbjct: 477 SAGVPPATAASQQLGQNPFAMAGSATEFAGRDEQDEMQLVLCTECTRNYESE-ASLVK-- 533
Query: 431 EKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTC 490
+E E R L WL D +A QT +K + LI EL++KW+ C
Sbjct: 534 ----AEDDVEGPRASLAGWLVL------DGPSAAQTPHKQKYLI------ELKRKWSRLC 577
Query: 491 LNQHPNFHPSS 501
H P S
Sbjct: 578 GKLHLCSDPCS 588
>gi|357152976|ref|XP_003576297.1| PREDICTED: uncharacterized protein LOC100837720 [Brachypodium
distachyon]
Length = 841
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 178/384 (46%), Gaps = 71/384 (18%)
Query: 27 ASRRNHGQTTPLHVAATLLAS---PS----GYLRQACIKSHPNSSHPLQCRALELCFSVA 79
A RR H Q TPLHVA +L+S P+ G LR AC++S + SHPLQC+ALELCF+VA
Sbjct: 29 ARRRGHAQVTPLHVATAMLSSSPAPAAPGPGLLRAACLRSS-SHSHPLQCKALELCFNVA 87
Query: 80 LERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQQQ-QPLLA-----VKVELE 133
L RLPT+ +SNAL+AA KRAQAH RRG E P+LA KVELE
Sbjct: 88 LNRLPTSFHGHGGSPTAALSNALVAAFKRAQAHHRRGSGESSSPAPVLAGHGGGTKVELE 147
Query: 134 QLIISILDDPSVSRVMREASFSSPAVKATIE--QSLNSSCSVSNSSPIGLGFRPSSRNLY 191
QL++SILDDPSVSRVMREA FSS VKA + + + S + P + +S
Sbjct: 148 QLVVSILDDPSVSRVMREAGFSSALVKANVAALERESPKPSPPSDHPHPSHYTATSTKKL 207
Query: 192 MNPRLQQAGGVCGGQSEPEMVVRESLAKIESKELDGV----------------------- 228
N GV GG E M V E +A + + + V
Sbjct: 208 NN-------GVGGGGIEDAMKVLECMASGQHRCIVAVSGSGGGHGDDGGSARAERAVKAV 260
Query: 229 -----------------LKNVQIIRLD-KDFTCDKAGIV-SKLKDLGALIETKFGNGDGV 269
L VQ + L F G V ++ +L L G G+
Sbjct: 261 MDMVSKAELPQGQNYKQLACVQFVPLSVSSFRAAARGEVDARTGELRGLAREAQRAGKGL 320
Query: 270 ILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLIGTA 329
++ + DL + + + P + + L V E+ LV GGGR W++G A
Sbjct: 321 VVVVQDLAFAADFWAEAGKRPRA---EDYYCPLEHAVMEVSGLVRH---GGGRFWMLGFA 374
Query: 330 TCETYLRCQVYHPSMENDWDLQAV 353
+ + RC+ PS+ + W + V
Sbjct: 375 SEAVFSRCRAGRPSLADVWGIHPV 398
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 39/196 (19%)
Query: 637 QEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGAS--- 693
++ A A+A+ V + + G +R + WL+F G D GKK MA L+ LV G+
Sbjct: 585 RDLAPAIASVVLRRRSGVTTQRRRTAAAATWLVFRGDDGDGKKAMAMELARLVFGSYADF 644
Query: 694 ---------------------PIMIPLGPRRDHEEPEVRVRGKTALD-KIGEAVKRNPFS 731
P RR P+ VR A K+ EA++ NP
Sbjct: 645 ACLTISADHSVVGFPSSGEFVPATKTTFKRRRSRSPDDNVRHGCAQSIKLYEALRENPRR 704
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSY---------GREISLGNVIFILTADWLPD 782
VI+++ ++ D + G +K A+ GR+ S G + L + I +L+ D D
Sbjct: 705 VIMVDGAEQLD-IDNGCVKEAIANGRMRCSSSVGNVNGNGGDSVGLEDAIVVLSFD---D 760
Query: 783 SL-KFLSQGITLDEKK 797
S + SQ + +D+++
Sbjct: 761 SRPRVKSQRVLIDDEE 776
>gi|356494937|ref|XP_003516337.1| PREDICTED: TMV resistance protein N-like [Glycine max]
Length = 1258
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 113/167 (67%), Gaps = 13/167 (7%)
Query: 1 MRAGLSTI--QQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIK 58
MR G S+I Q LTPE ASVL SIA A + H TTPLHV A LL SPSG+L QAC+K
Sbjct: 16 MRDGQSSIITQLALTPETASVLKESIAMAREKKHLHTTPLHVVAKLLDSPSGFLHQACMK 75
Query: 59 SHPNSSHPLQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCP 118
S P +S+PLQ + LELC +VA+ RLP + + ++P ISN+L AA KR +A Q
Sbjct: 76 SQP-TSYPLQYQGLELCLNVAMNRLPMSISS----MEPLISNSLKAAFKRIRAQQ----- 125
Query: 119 EQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ 165
+QP KVELEQLI+SILDDPSVS+VM+ A +SSP + AT ++
Sbjct: 126 -HGRQPPSTDKVELEQLILSILDDPSVSKVMKAAGYSSPDISATFQR 171
>gi|356541735|ref|XP_003539329.1| PREDICTED: uncharacterized protein LOC100805591 [Glycine max]
Length = 825
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 181/375 (48%), Gaps = 41/375 (10%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKK 680
FK L L EKV WQ EA A+ TV++C+ G GK G+ + D+WL F+GPDR+GK+K
Sbjct: 411 FKSLYHLLTEKVGWQDEAIYAINRTVSRCRSGAGKLSSGSHVRADIWLAFLGPDRLGKRK 470
Query: 681 MASALSELVSGASPIMIPLG-PRRDHEEPEVRV------------RGKTALDKIGEAVKR 727
+ASAL+E++ G +I + +D P + KT LD I + +
Sbjct: 471 IASALAEILFGNKQSLITVDLSSQDRCYPSYSIFEFQNSYCHDVLMRKTVLDYIAGELSK 530
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFL 787
P SV+ LE++D+AD +V+ ++ A++ G+ S+GREIS+ N +FI+T+ S F
Sbjct: 531 KPHSVVFLENVDQADFLVQNSLFHAIKTGKFPYSHGREISINNAMFIVTSSVFKSSGSF- 589
Query: 788 SQGITLDEKKLTS---LASGEWQLRLSIRGKTTKRRASWLDEEERSTKPRKETGSGLSFD 844
+ D K L + Q++LS+ + + S + + + K + LS
Sbjct: 590 --NLEEDPKMFPEERILEAKRCQMQLSLGHASEGAKRSGCTNVKVAERKGKSKTTFLS-- 645
Query: 845 LNKAADVGDDKD------------GSHNSSDLTVDHEE-EHGFTNRLLMTPSTSTPS--- 888
K + GD KD S + DL + EE E G + S S
Sbjct: 646 KRKLIESGDLKDKAPCKTLKPVREASRSYLDLNMPLEEVEEGNNYNDDESESIVENSGAW 705
Query: 889 -QDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWL 947
DL + VD +VFKP +F I V +I +F ++G +EI E + +++ WL
Sbjct: 706 LNDLCDQVDEKVVFKPFNFDSIAEQVIKSIDTQFQKMLGSEFILEIEYEVMTQILAAAWL 765
Query: 948 G--RTGLEDWTEKVL 960
+ LEDW E VL
Sbjct: 766 SDKKKSLEDWVEHVL 780
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 305 VVAEIGKLVARFGGGGGRLWLIGTA-TCETYLRCQVYHPSMENDWDLQAVPIAAKTP-LS 362
VV+++ +L+ GGG++WL+G A T E Y + P+++ DWDL + + + TP +
Sbjct: 40 VVSQLTRLLGV--HGGGKVWLLGVAGTSEDYSKFLRLFPTVDKDWDLHLLTMTSATPSIE 97
Query: 363 GMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCLQNYEQE 422
++P+ SS + S P F T + N + ++ C C ++ EQE
Sbjct: 98 KLYPK-------SSLMGSFVPFGGFFSTPSEFKNPVSCTNASSSSLLTRCDTCNESCEQE 150
Query: 423 LAKLSKEFEKSSSEVKSEVARPLLPQWLH-NAKAHDGDDKTAEQ----TENKDQDLIWKQ 477
+A + K ++ S + LP+ N + G D + + +++
Sbjct: 151 VADILK--VGPAATSTSVYSSTSLPRLQKVNVDSDRGLDVAKNELHHPVQTNEENTSLNI 208
Query: 478 KSQELQKKWNDTCLNQHPN 496
K LQ+KW+D C H N
Sbjct: 209 KIFGLQRKWSDICQRLHQN 227
>gi|242084828|ref|XP_002442839.1| hypothetical protein SORBIDRAFT_08g003680 [Sorghum bicolor]
gi|241943532|gb|EES16677.1| hypothetical protein SORBIDRAFT_08g003680 [Sorghum bicolor]
Length = 814
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 202/445 (45%), Gaps = 92/445 (20%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLA--SPSGYLRQACIK 58
MR+G +QQ L +AA+V+ +++ A RR H Q TPLHVA+ +L+ LR AC++
Sbjct: 1 MRSGGCAVQQELAGDAAAVMRQAVSLARRRGHAQVTPLHVASAVLSVSDAGALLRAACLR 60
Query: 59 SHPNSSHPLQCRALELCFSVALERLPTA--------------QQNVSPG---LDPPISNA 101
S SSHPLQC+ALELCF+VAL RL T Q + +P P +SNA
Sbjct: 61 SRA-SSHPLQCKALELCFNVALNRLATTAGMPGPPAPPPAMFQFHHAPAGGHRAPALSNA 119
Query: 102 LMAALKRAQAHQRRGCPEQQQQPLLAVK-----VELEQLIISILDDPSVSRVMREASFSS 156
L AA KRAQA+QRRG + VELEQL+ISILDDPSVSRVMR+A F+S
Sbjct: 120 LAAAFKRAQANQRRGGGGGGFGVRRGGRPAPAPVELEQLVISILDDPSVSRVMRDAGFAS 179
Query: 157 PAVKATIEQSLNSSCSVSN---SSPIGLGFRPSSRNLYMNPRLQQAGGVCGG-------- 205
V A +E++++SS SN SS ++ +A + G
Sbjct: 180 AEVNANVEKAVSSSEQSSNTATSSTASPNTTTNNNPTKDKESRAKADDIVGDAVRVLDCM 239
Query: 206 --------------QSEPEMVVRESLAKIESKEL----DGVLKNVQII--------RLDK 239
+ E VV+ + K+ EL LKN Q++ R+ +
Sbjct: 240 ASGTNRCVVVLGETAAAAERVVKAVMDKVSKGELRRRQHERLKNAQLVPFSAASFQRMPR 299
Query: 240 DFTCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDL----------KWLVEQQVTSFGV 289
+ +AG DL AL+ G GV+L L DL W + G+
Sbjct: 300 EEVEARAG------DLCALVRECCAAGRGVVLVLEDLAYAAEAWTAASWKRSSGHRAHGL 353
Query: 290 PNSGTLQQQQQVLAEVVAEIGKLVARFGGGG---GRLWLIGTATCETYLRCQVYHPSMEN 346
+ +Q V E+ LV GG G G WL+G +Y C+ PS+E
Sbjct: 354 IDYCPVQH-------AVMELSSLVRGAGGRGRDKGMFWLLGFGASASYTSCRSGQPSLET 406
Query: 347 DWDLQAVPIAAKTPLSGMFPRLGSN 371
L V + P G+ LG +
Sbjct: 407 VLGLHPVVV----PDGGLALSLGGD 427
Score = 40.0 bits (92), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 26/184 (14%)
Query: 617 LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRV 676
L ++ K L +L +V ++ A +A+ V Q + +G R WLLF G D
Sbjct: 555 LTAENLKVLSSALETRVPRHRDIAPGIASAVLQRR--SGVTRTTRPTPATWLLFQGRDND 612
Query: 677 GKKKMASALSELVSGA--------SPIMIPLGP--------------RRDHEEPEVRVRG 714
GK MA L+ LV G+ + L P +R P+ G
Sbjct: 613 GKMAMARELARLVFGSYAEFTCCFAAAASKLAPDHSGSSSPGDRRSLKRQRSSPDNEHGG 672
Query: 715 KTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFI 774
+ EA++ NP V+L++ E D + I AM G + G +SL + I +
Sbjct: 673 --CMQMFYEAIRENPHRVVLVDGGVEHDSELEVGIMDAMASGTVRGCDGGVVSLEDSIVV 730
Query: 775 LTAD 778
+
Sbjct: 731 YCCE 734
>gi|395146545|gb|AFN53698.1| fatty acid desaturase 3a [Linum usitatissimum]
Length = 901
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 194/418 (46%), Gaps = 84/418 (20%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M + ++T +Q LT EAA L+ ++A A RR+H QTT LH + LLA PS LR AC +S
Sbjct: 1 MPSPVTTARQCLTDEAARALDDAVAVARRRSHSQTTSLHAVSALLALPSSSLRDACFRSR 60
Query: 61 PNSS-HP---LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRG 116
+SS +P LQ RALELC V+L+RLP+++ +P ISNALMAA+KR+QA+QRR
Sbjct: 61 ISSSDYPPPRLQFRALELCVGVSLDRLPSSKS----ADEPLISNALMAAIKRSQANQRRH 116
Query: 117 CPEQQQQPL-------LAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATI------ 163
Q + +KVEL+ I SILDDP VSRV EA F S +K+ I
Sbjct: 117 PDSFHLQQIHFGNQAPAVIKVELKHFIGSILDDPVVSRVFGEAGFISYQIKSVILSPPLL 176
Query: 164 ------------EQSLNSSCSVSNSSPIGLGFRPSSRNLYMNPRLQQAG----------- 200
S S ++ G GF S + R+ +
Sbjct: 177 LQTPRFPRSGLLPPSFFSRNLGASDPGFGFGFSFSDDGAENSRRIGEVMVKPEGKGKNPL 236
Query: 201 --GVCGGQSEPEMVVRESLAKIES----------KELDGVLKNVQIIRLDKDFTCDKAGI 248
G C + V R + E+ G+ +V +I D++ T
Sbjct: 237 LLGACASDALKRFVERVKNNSKGNSSGGGGSSLPSEIAGI--SVVVIESDEEETGQ---- 290
Query: 249 VSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAE 308
K +G +E +G G++ GDL+ L+ + +V++
Sbjct: 291 --KFDKMGRALEA--CSGRGIVASFGDLEVLIGG-------------DDDDTAGSYMVSK 333
Query: 309 IGKLVARFGGGGGRLWLIG-TATCETYLRCQVYHPSMENDWDLQAVPI-AAKTPLSGM 364
+ L+ F +LWLIG A+ + Y + P++E DWDLQ +PI ++ +P+SG
Sbjct: 334 LTTLLEMF---KEKLWLIGAAASYDVYSKFLKRFPAVEKDWDLQLLPITSSSSPVSGF 388
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Query: 711 RVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
+ RGKT +D I +K+ P SV LE++++AD++ R ++ +A+ +G+ DSYGREIS N
Sbjct: 391 KSRGKTVIDYITAEMKKKPRSVTFLENVEQADLLTRASLSQAVSKGKFADSYGREISTSN 450
Query: 771 VIFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWL 824
VIFI T + + T+ + + L + WQ++L + TK R W+
Sbjct: 451 VIFITTTSAMVGDTDLSHENKTVKYTEESILGAKRWQMQL--QNLKTKNRDYWV 502
>gi|242067163|ref|XP_002448858.1| hypothetical protein SORBIDRAFT_05g000365 [Sorghum bicolor]
gi|241934701|gb|EES07846.1| hypothetical protein SORBIDRAFT_05g000365 [Sorghum bicolor]
Length = 1050
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 184/399 (46%), Gaps = 56/399 (14%)
Query: 617 LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRV 676
D ++K L++ L + V Q+EA SA+ ++ +C+ +RRGA K D+W F GPD +
Sbjct: 650 YDLSNYKLLMERLFKAVGRQEEALSAICASIERCR-SMERRRGANKKNDIWFSFYGPDSI 708
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLE 736
K+++ AL+EL+ G S +I L H+ RGK A D I E +++ SVI L+
Sbjct: 709 AKRRVGEALAELMHGGSENLIYLDLSL-HDWGNPNFRGKRATDCIAEELRKKRHSVIFLD 767
Query: 737 DIDEADMVVRGNIKRAMERGRLVDSY-GREISLGNVIFILTADWL---PDSLKFLSQGIT 792
+ID AD +V+ ++ AME GR D + GR L N I +L+ + D+ + +
Sbjct: 768 NIDRADCLVQESLIHAMETGRYKDLHGGRVADLNNSIVVLSTRMIQGCQDASLGMEEDNA 827
Query: 793 LDEKKLTSLASGEWQL---------------------RLSIRGKT--------TKRRASW 823
E+K+ + + ++ R S+R +KR+
Sbjct: 828 FSEEKVVAARGHQLKIIVEPGTANIGEDPGGKVVVSSRHSLRNSQASLFSSSLSKRKLHI 887
Query: 824 LDEEER-----STKPRKETGSGLSFDLNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRL 878
D +E+ ST R S + FDLN D + DG +SS + +
Sbjct: 888 SDGQEKTAESPSTSKRLHRRSSVPFDLNLPGDEAEAHDGDDDSSSSHENSSGD------- 940
Query: 879 LMTPSTSTPSQDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEAL 938
P S +LL SVD +I FKP DFG++ D+ + S +G +EI A+
Sbjct: 941 ---PEGSV--GNLLRSVDESINFKPFDFGKLCEDILQEFSSTMSKTLGSRCRLEIDAVAM 995
Query: 939 EKLVGGVWLG----RTGLEDWTEKVLVPSLHQLKLRLPN 973
E++V W + + W E+V +L QLK+R N
Sbjct: 996 EQVVAAAWASDSHEKRPVRTWVEQVFARTLEQLKVRCKN 1034
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 151/522 (28%), Positives = 229/522 (43%), Gaps = 83/522 (15%)
Query: 9 QQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLA-SPSGYLRQACIKSHPNSSHP- 66
+Q L P A + L+ ++A A RR H QTT LH+ A+LLA + + LR A ++ + P
Sbjct: 9 RQCLAPPAVTALDAAVASARRRAHAQTTSLHLIASLLAPTAAPLLRDALARARSAAYSPR 68
Query: 67 LQCRALELCFSVALERLPTAQQNVSPGL-----DPPISNALMAALKRAQAHQRRGCPEQQ 121
LQ +AL+LCF+V+L+RLP+ + S +PP++N+LMAA+KR+QA+QRR P+
Sbjct: 69 LQLKALDLCFAVSLDRLPSTPTSSSASSSNDQHEPPVANSLMAAIKRSQANQRRN-PDT- 126
Query: 122 QQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIGL 181
Q S PS SRV +A F S +K I L + V + GL
Sbjct: 127 ----FHFYHHHHQAAAS--PTPS-SRVFADAGFRSNEIKVAI---LRPAPPVPLLARAGL 176
Query: 182 GFRPSSRNLYM-------NPRLQQAGGVCGGQSEPEMVVRESLAKIESKELDGVLKNVQI 234
R L++ + + G G+ + + LA+ + L GV
Sbjct: 177 PTRARPPPLFLCSFAAADDADVPSPAGAAPGEDNCRRIA-DILARGRNPMLVGVGAASAA 235
Query: 235 IRLD-----KDFTCDKAGIVSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGV 289
+ A + DL A+ G G+I +GDLK L V
Sbjct: 236 ADFANASPYRILPVGPASVNQNQTDLLAVATP----GSGIIFSIGDLKDL---------V 282
Query: 290 PNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGR-LWLIG-TATCETYLRCQVYHPSMEND 347
P+ LQ + VVAE+ +L+ G +W++G +AT ETYL P ++ D
Sbjct: 283 PDEADLQDAAR---RVVAEVTRLLETHRAAGRHTVWVMGWSATYETYLAFLSKFPLVDKD 339
Query: 348 WDLQAVPIAA----------KTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPR 397
W+LQ +PI A + S PRL L + + + +F L
Sbjct: 340 WELQLLPITAVRDARPCSRTRASSSSSKPRL-----LPCPMPATTSFMESFVPFGGFL-- 392
Query: 398 RVSENLDPARRMSC-----CRQCLQNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHN 452
DP SC C+QC YEQE+A + + S + +E + LP L N
Sbjct: 393 -----CDPYEANSCPQALRCQQCNDRYEQEVATIIR-----GSGITAEAHQDGLPSMLQN 442
Query: 453 AKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQH 494
G + + + +D ++ K Q L+KKWN+ CL H
Sbjct: 443 GSMM-GPNNGFDVLKVRDDQMVLSTKIQNLKKKWNEYCLRLH 483
>gi|22329388|ref|NP_172200.2| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
gi|20260490|gb|AAM13143.1| unknown protein [Arabidopsis thaliana]
gi|30725704|gb|AAP37874.1| At1g07200 [Arabidopsis thaliana]
gi|332189970|gb|AEE28091.1| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
Length = 422
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 176/378 (46%), Gaps = 46/378 (12%)
Query: 610 NDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLL 669
N L+ D FK L + L KV WQ EA +A++ + CK + +R A +WL
Sbjct: 50 NSSLEHTYQKD-FKSLREILSRKVAWQTEAVNAISQIICGCKTDSTRRNQASG---IWLA 105
Query: 670 FMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEAVKRNP 729
+GPD+VGKKK+A LSE+ G I + +H + + RGKT +D + + R P
Sbjct: 106 LLGPDKVGKKKVAMTLSEVFFGGKVNYICVDFGAEHCSLDDKFRGKTVVDYVTGELSRKP 165
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPD-SLKFLS 788
SV+LLE++++A+ + + A+ G++ D +GR IS+ NVI ++T+ D + +
Sbjct: 166 HSVVLLENVEKAEFPDQMRLSEAVSTGKIRDLHGRVISMKNVIVVVTSGIAKDNATDHVI 225
Query: 789 QGITLDEKKLTSLASGEWQLRLSIRGKTTK----RRASWLDEEERSTKPRKETGSGLSFD 844
+ + E+++ S S + Q++L G TK +R L+ +R+ K ++ D
Sbjct: 226 KPVKFPEEQVLSARSWKLQIKL---GDATKFGVNKRKYELETAQRAVKVQRSY-----LD 277
Query: 845 LNKAADVGDDKDGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIVFKPV 904
LN N ++ + DHE E + + VD + FKPV
Sbjct: 278 LNLPV----------NETEFSPDHEAE-----------DRDAWFDEFIEKVDGKVTFKPV 316
Query: 905 DFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKL--------VGGVWLGRTGLEDWT 956
DF + +++ I F G +E+ E + ++ G GRT ++ W
Sbjct: 317 DFDELAKNIQEKIGSHFERCFGSETHLELDKEVILQILAASWSSLSSGEEEGRTIVDQWM 376
Query: 957 EKVLVPSLHQLKLRLPNN 974
+ VL S + K + +N
Sbjct: 377 QTVLARSFAEAKQKYGSN 394
>gi|297611031|ref|NP_001065527.2| Os11g0104300 [Oryza sativa Japonica Group]
gi|255679687|dbj|BAF27372.2| Os11g0104300 [Oryza sativa Japonica Group]
Length = 435
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 127/391 (32%), Positives = 194/391 (49%), Gaps = 62/391 (15%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLH-VAATLLASPSGYLRQACIKS 59
M ++ +Q L+P A L+ ++A + RR H QTT LH +++ L LR A ++
Sbjct: 1 MPTPVAAARQCLSPAAVPALDAAVASSRRRAHAQTTSLHLISSLLAPPAPPLLRDALARA 60
Query: 60 HPNSSHP-LQCRALELCFSVALERLPTAQQNVSPGL---DPPISNALMAALKRAQAHQRR 115
+ P +Q +AL+LCF+V+L+RLP+ + S +PP+SN+LMAA+KR+QA+QRR
Sbjct: 61 RSAAYSPRVQLKALDLCFAVSLDRLPSVSASSSSSGAADEPPVSNSLMAAIKRSQANQRR 120
Query: 116 GCPEQQQ--------QPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQS- 166
P+ Q AVKVEL L+++ILDDP VSRV EA F S +K I +
Sbjct: 121 N-PDTFHFYHQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLAILRPA 179
Query: 167 -----LNSSCSVSNSSPIGL-GFRPSSRNLYMNPRLQQAGGVCGGQSEPEMVVRESLAKI 220
L + + P+ L F + +P AG + G E + E L++
Sbjct: 180 PPMPLLGRLPTRTRPPPLFLCSFAAADDADVPSP----AGNLAGAGEENCRRIAEILSRG 235
Query: 221 ESKELDGV-----------LKNVQIIRLDKDFTCDKAGIVSKLKDLGALIETKFGNGDGV 269
+ L GV +II +D + T D++ DLG G+
Sbjct: 236 RNPMLVGVGAASAADDFAAASPYRIIHVDPN-TIDRS-------DLGVAAAMASATS-GL 286
Query: 270 ILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEV--VAEIGKLVARFGGGGGRLWLIG 327
I+ +GDLK LV + ++ ++ ++V+AEV V E V GR+W++G
Sbjct: 287 IISIGDLKQLVPDE-------DAEAQEKGRRVVAEVTRVLETHSKV-------GRVWVMG 332
Query: 328 -TATCETYLRCQVYHPSMENDWDLQAVPIAA 357
+AT ETYL P ++ DWDLQ +PI A
Sbjct: 333 WSATYETYLAFLSKFPLVDKDWDLQLLPITA 363
>gi|4587988|gb|AAD25929.1|AF085279_2 hypothetical protein [Arabidopsis thaliana]
Length = 798
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 209/438 (47%), Gaps = 80/438 (18%)
Query: 565 VRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKR 624
V TDL L S V + K H++ KDF S+P + N + L+ +SFK
Sbjct: 377 VTTDLNLRVSSVTTGSGLKKHLDS-KDF-----SQPQSVSSYSFDN---PRDLNAESFKI 427
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
+ + L + V Q EAA ++ ++Q +R D+WL +GPD VGK++M+
Sbjct: 428 IYRRLTDMVSGQDEAARVISCALSQPPKSVTRR-------DVWLNLVGPDTVGKRRMSLV 480
Query: 685 LSELV--SGASPIMIPLGPRRDH----EEPEVRVRGKTALDKIGEAVKRNPFSVILLEDI 738
L+E+V S + + LG ++P +R+RGKT +D I E + RNPF V+ LE+I
Sbjct: 481 LAEIVYQSEHRFMAVDLGAAEQGMGGCDDP-MRLRGKTMVDHIFEVMCRNPFCVVFLENI 539
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQG----ITLD 794
++AD ++ ++ +A+E G+ +DS+GRE+ +GN IF++T+ SQG +
Sbjct: 540 EKADEKLQMSLSKAIETGKFMDSHGREVGIGNTIFVMTSS---------SQGSATTTSYS 590
Query: 795 EKKLTSLASGEWQLRL----------SIRGKTT--KRRASWL------DEEERSTKPRKE 836
E+KL + + ++R+ S+ G T+ KR+ L + S K
Sbjct: 591 EEKLLRVKGRQVEIRIETVSSLPMVRSVYGPTSVNKRKLMGLGNLQETKDTVESVKRLNR 650
Query: 837 TGSGLSFDLNKAADVGDDKDGSH--NSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNS 894
T +G+ DLN A + ++ H +S++ + + + H RL+ P
Sbjct: 651 TTNGV-LDLNLPAQETEIEEKYHCEENSNVWLMNLKNH---KRLIEVP------------ 694
Query: 895 VDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGVWL--GRTGL 952
FKP DF + + ++ + F + +E+ + +E+L+ V+ R +
Sbjct: 695 ------FKPFDFEGLAEKIKKSVKENFDKCVRSDCLLEVDPKIIERLLAAVYFSDSRKDI 748
Query: 953 EDWTEKVLVPSLHQLKLR 970
++ E ++ P ++K R
Sbjct: 749 KELLENIMSPVFLRIKER 766
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 117/276 (42%), Gaps = 53/276 (19%)
Query: 120 QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPI 179
Q Q L VKVEL QLI+SILDDP VSRV EA F S +K +I + + S+ P+
Sbjct: 5 QNQNSLSCVKVELRQLILSILDDPVVSRVFGEAGFRSSELKLSIIRPVPHLLRYSSQQPL 64
Query: 180 GL--------------GFRPSSRNLYMNPRLQQAGGVCGGQS--EPEM-------VVRES 216
L GF S N + ++ V P + V+
Sbjct: 65 FLCNLTGNPEPNPVRWGFTVPSLNFNGDLDYRRISAVFTKDKGRNPLLVGVSAYGVLTSY 124
Query: 217 LAKIESKELDGV-----LKNVQIIRLDKDFT------CDKAGIVSKLKDLGALIETKFGN 265
L +E + DG+ L + + + + + DK ++ DLG L E G+
Sbjct: 125 LNSLEKNQTDGMILPTKLHGLTAVNIGSEISDQISVKFDKTYTDTRFHDLGKLAEQ--GS 182
Query: 266 GDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWL 325
G G++L GDL+ + VP + +V I +L+ R G R+WL
Sbjct: 183 GPGLLLHYGDLRVFTNGEG---NVPAANY----------IVNRISELLRRH---GRRVWL 226
Query: 326 IGTATC-ETYLRCQVYHPSMENDWDLQAVPIAAKTP 360
IG T E Y + P++E DWDLQ + I + P
Sbjct: 227 IGATTSNEVYEKMMRRFPNVEKDWDLQLLTITSLKP 262
>gi|147832400|emb|CAN64423.1| hypothetical protein VITISV_032275 [Vitis vinifera]
Length = 578
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 85/135 (62%), Gaps = 13/135 (9%)
Query: 830 STKPRKETGSGLSFDLNKAADVGDDK-DGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPS 888
ST+PRK+ S SFDLN+AA DD+ DGSHN D +DHE EH NR + T S S
Sbjct: 260 STQPRKKDSSAPSFDLNQAASTEDDRADGSHNLGDFPIDHEAEHSPENRCMFTTSAS--- 316
Query: 889 QDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGV--- 945
++L NSVD+ I FKPVDF IR V + I +KFSS+IGD LSI+I DEALEK+
Sbjct: 317 RELFNSVDNVITFKPVDFNLIRHQVRSCIARKFSSVIGDKLSIQIEDEALEKMFSCFTTG 376
Query: 946 ------WLGRTGLED 954
+LGR GL +
Sbjct: 377 QCSSHRFLGREGLTE 391
>gi|449530752|ref|XP_004172357.1| PREDICTED: uncharacterized LOC101204506, partial [Cucumis sativus]
Length = 307
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 108/173 (62%), Gaps = 16/173 (9%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
M +S +Q LT EAA L+ +++ A RR H QTT LH + LL+ PS LR AC ++
Sbjct: 1 MPTPVSAARQCLTEEAARALDDAVSVARRRCHAQTTSLHAVSALLSLPSSALRDACSRAR 60
Query: 61 PNSSHP-LQCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
+ P LQ RAL+L V+L+RLP+++ P +PP+SN+LMAA+KR+QA+QRR PE
Sbjct: 61 SCAYLPRLQFRALDLSVGVSLDRLPSSK----PTDEPPVSNSLMAAIKRSQANQRRH-PE 115
Query: 120 ---------QQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATI 163
QQQ P + +KVEL+ I+SILDD VSRV EA F S +K I
Sbjct: 116 SFHLHQIHNQQQTPSI-LKVELKYFILSILDDAIVSRVFGEAGFRSCDIKLAI 167
>gi|302142619|emb|CBI19822.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 83/135 (61%), Gaps = 13/135 (9%)
Query: 830 STKPRKETGSGLSFDLNKAADVGDDK-DGSHNSSDLTVDHEEEHGFTNRLLMTPSTSTPS 888
S PRK+ S SFDLN+AA DD+ DGSHN D +DHE EH NR + T S S
Sbjct: 92 SIVPRKKDSSAPSFDLNQAASTEDDRADGSHNLGDFPIDHEAEHSPENRCMFTTSAS--- 148
Query: 889 QDLLNSVDSAIVFKPVDFGRIRRDVTNAITKKFSSIIGDALSIEILDEALEKLVGGV--- 945
++L NSVD+ I FKPVDF IR V + I +KFSS+IGD LSI+I DEALEK+
Sbjct: 149 RELFNSVDNVITFKPVDFNLIRHQVRSCIARKFSSVIGDKLSIQIEDEALEKMFSCFTTG 208
Query: 946 ------WLGRTGLED 954
+LGR GL +
Sbjct: 209 QCSSHRFLGREGLTE 223
>gi|218194552|gb|EEC76979.1| hypothetical protein OsI_15283 [Oryza sativa Indica Group]
Length = 845
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 93/158 (58%), Gaps = 42/158 (26%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPS----------- 49
MRAG TI Q+LT EAA+VL ++ A RR H Q TPLHVA LL SP+
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLALGIARRRGHAQVTPLHVAFALL-SPACSPPQQQPAPP 59
Query: 50 --GYLRQACIKSHPN-----SSHPLQCRALELCFSVALERL------------------- 83
G L++AC++SHP+ ++HPLQCRALELCF+VAL RL
Sbjct: 60 PYGLLKRACLRSHPSAAAAVAAHPLQCRALELCFNVALNRLPTSAPHSPPPSSSAPSGAV 119
Query: 84 --PTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPE 119
P A + P +P +SNAL+AALKRAQA+QRRGC E
Sbjct: 120 APPFASSLIQP--NPTLSNALVAALKRAQANQRRGCVE 155
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 623 KRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKG-DMWLLFMGPDRVGKKKM 681
+ L + L + V WQ+ A + +A V G R G G+KG +WLL G D +++
Sbjct: 616 RELERRLRKNVPWQRAAVAEIADAVAA-----GARSGNGTKGAGVWLLLKGSDHAAVRRV 670
Query: 682 ASALSE--LVSGASPIMIPLGPRR----DHEEPEVRVRGKTALDKIGEAVKRNPFSVILL 735
A+ ++E S +++ P + D +V R A G + V+++
Sbjct: 671 AAVIAETHCCSADRVVVVSADPNKFGCADDFRSDVVARASMAAAAGGNKL------VLVV 724
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSY-GREISLGNVIFILTADWLPDS 783
+D++ A V + A G L D + G+E+ L + ++T L D+
Sbjct: 725 DDVERAPQHVVECLVAASRSGALKDKFGGQELDLSGSVVVMTTSKLADA 773
>gi|16604653|gb|AAL24119.1| unknown protein [Arabidopsis thaliana]
gi|28393849|gb|AAO42332.1| unknown protein [Arabidopsis thaliana]
Length = 920
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 197/793 (24%), Positives = 311/793 (39%), Gaps = 202/793 (25%)
Query: 96 PPISNALMAALKRAQAHQRRGCPEQQQQP----------LLAVKVELEQLII-------- 137
P ++NAL+AALKRAQAHQRRGC EQQQQ LLAVKVELEQL+I
Sbjct: 6 PSLANALVAALKRAQAHQRRGCIEQQQQTQTHPQTQQTQLLAVKVELEQLVISILDDPSV 65
Query: 138 ---------------SILDDPSVSRVMREAS----FSSPAVKATIEQSLNSSCSVS---- 174
S ++D SVS V S FSSP +Q NS +
Sbjct: 66 SRVMREAGFNSTAVKSCVEDCSVSSVFYGGSAVGVFSSPNSPDQQQQHHNSINRLHHYQN 125
Query: 175 -----------------------NSSPIGLGFRPSSR---------------NLYMNPRL 196
+ +P+ L S ++ M +
Sbjct: 126 PKDFNFINPNFPLWQTHFLNQSPDQNPLLLSSSASHHHQQQRLREIDLKLVVDVLMRKKT 185
Query: 197 QQAGGVCGGQS--EPEMVVRESLAKIESKELD--GVLKNVQIIRLDKDFTCDK----AGI 248
++ V G S E V E +AK+E E+D G LK ++ K +
Sbjct: 186 KKKNPVIVGDSISFTEGFVSELMAKLERGEIDQTGELKQTHFVKFHFSPMASKFMRREDV 245
Query: 249 VSKLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQ---QQQVLAEV 305
+K+L + + +G I+ GDLKW V++ + NSG + + L +
Sbjct: 246 ELNIKELRKKVLSLTTSGKNAIIFTGDLKWTVKEITNN----NSGGINEISSSYSPLDHL 301
Query: 306 VAEIGKLVARFGGGGG-------RLWLIGTATCETYLRCQVYHPSMENDWDLQ--AVPIA 356
V EIGKL+ G ++W++GTA+ +TY+RCQ+ PS+E W L +VP +
Sbjct: 302 VEEIGKLITECNDDGDDDDCKTRKVWVMGTASFQTYMRCQMRQPSLETLWALHPVSVPSS 361
Query: 357 AKTPLSGMFPRLGSNGILSSSVESLSPLKSAFQTTAAALPRRVSENLDPARRMSCCRQCL 416
A LS + ++S + + T + + + E + +SCC +C+
Sbjct: 362 ANLGLS----------LHATSGHEARNMSTVNATKSLSGYDKAEEEETISHVLSCCPECV 411
Query: 417 QNYEQELAKLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWK 476
++++E L +K LLP WL ++HD D + K
Sbjct: 412 TSFDREAKSLKANQDK------------LLPSWL---QSHDADSSSQ------------K 444
Query: 477 QKSQELQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPF--QPKVQL 534
+ L++KWN C H + G LSM G Y L P+ +
Sbjct: 445 DELMGLKRKWNRFCETLH-----NQTGQ-------LSMMGNYPYGL----PYGSSHESSK 488
Query: 535 NRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLG 594
+ +L D+L L +P +RA + + R + + + EK G
Sbjct: 489 STSLIDSLGL-------KPNQRATNSIAKFRRQNSCTIEFDLGGNEHEK----------G 531
Query: 595 CISSEPPQNKLHESQNDQLQKPL-DPDS-------FKRLLKSLMEKVWWQQEAASAVATT 646
+E +K +E+ L + L DS L+K+L E + Q +A +
Sbjct: 532 ESINEAEDDKGNETVTLDLGRSLFRSDSVTDTRLKLSALVKALEESIPRQTVTMRLIAES 591
Query: 647 VTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
+ C K D W++ G D K+++A +SE V G+ ++ + ++
Sbjct: 592 LMDC---------VSKKKDSWIIIEGRDTTAKRRVARTVSESVFGSFESLVHIDLKKKGN 642
Query: 707 EPEVRVRGKTALDKIGEAVKRNPFSVI-LLEDIDEADMVVRGNIKRAMERGRLVDSYGRE 765
E + A + +NP V+ L+EDID AD + E R + +
Sbjct: 643 ESKASPATLLAYE------LKNPEKVVFLIEDIDLADSRFLKLLADRFEDKRRIKT---G 693
Query: 766 ISLGNVIFILTAD 778
I IFILT +
Sbjct: 694 IDHRQAIFILTKE 706
>gi|297740197|emb|CBI30379.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 10/107 (9%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQ LT EAA V+ ++ A RR H Q TPLHVA T+LA+ +G LR AC++SH
Sbjct: 1 MRAGGCTVQQALTAEAAGVVKQAVTLARRRGHAQVTPLHVANTMLAATNGLLRTACLQSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTAQQNVSPGL-----DPPISNAL 102
SHPLQC+ALELCF+VAL RLP + SP L P ISNAL
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPASTS--SPMLGPHSQHPSISNAL 102
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 135/296 (45%), Gaps = 43/296 (14%)
Query: 210 EMVVRESLAKIESKELDGVLKNVQIIRLDKDFTC---DKAGIVSKLKDLGALIETKFGNG 266
E VVR + K++ ++ L++V++I L F+ + + KL +L +L+++ G G
Sbjct: 139 EGVVRGVMDKVDKGDVPEALRDVKLISLPL-FSFGHHSREEVEQKLGELKSLVKSCVGRG 197
Query: 267 DGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGGRLWLI 326
VIL L DLKW T + +S + + ++ E+GKLV FG G R WL+
Sbjct: 198 --VILYLEDLKW-----TTDYRASSSEQGRNYYCPVEHMIMELGKLVCGFGENG-RFWLM 249
Query: 327 GTATCETYLRCQVYHPSMENDWDLQAVPIAAKTPLSGMFPRLGSNGILSSSVESLSPLKS 386
G AT +TY RC+ HPS+E W L + I A + + P S L+S
Sbjct: 250 GIATFQTYSRCRTGHPSLETIWSLHPLTIPASSLALSLMPD--------------SDLQS 295
Query: 387 AFQTTAAALPRRVSENLD--PARRMSCCRQCLQNYEQELAKLSKEFEKSSSEVKSEVARP 444
F + A L+ ++++CC C N+E E + +S S+
Sbjct: 296 QFSSKKAGSGTSNWLMLEGGAEKQLTCCADCSANFENEARSI------PTSTCNSDSTTS 349
Query: 445 LLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQKSQELQKKWNDTCLNQHPNFHPS 500
LP WL K D+ + + N DQD + ++L KKWN C + H H S
Sbjct: 350 TLPTWLQQYK-----DENKKLSRN-DQDCV---AVRDLCKKWNSICSSAHKQPHSS 396
>gi|125560774|gb|EAZ06222.1| hypothetical protein OsI_28464 [Oryza sativa Indica Group]
Length = 202
Score = 111 bits (278), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/154 (38%), Positives = 89/154 (57%), Gaps = 17/154 (11%)
Query: 205 GQSEPEMVVRESLAKIESKELDGVLKNVQIIRLDKDFT---CDKAGIVSKLKDLGALIET 261
G + P+ V++E++ +I + L +++ L+ + DKA + +++ DLGA++E
Sbjct: 13 GDAGPDAVLKEAIRRIPTAGFPA-LAGAKVLPLEAELAKLAGDKAAMAARIGDLGAVVER 71
Query: 262 KFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLAEVVAEIGKLVARFGGGGG 321
G GV+LDLGDLKWLV+ G + VAE+G+L+ RFG G
Sbjct: 72 LLGEHGGVVLDLGDLKWLVD-----------GPAAAASEGGKAAVAEMGRLLRRFGRAG- 119
Query: 322 RLWLIGTATCETYLRCQVYHPSMENDWDLQAVPI 355
+W + TA C TYLRC+VYHP ME +WDL AVPI
Sbjct: 120 -VWAVCTAACTTYLRCKVYHPGMEAEWDLHAVPI 152
>gi|449530130|ref|XP_004172049.1| PREDICTED: chaperone protein ClpB 2-like [Cucumis sativus]
Length = 304
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 99/182 (54%), Gaps = 18/182 (9%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDM----WLLF 670
K L+ ++FKRL +L +KV WQ+ +A+ V QC+ G G+R+G GD WLLF
Sbjct: 37 KELNSENFKRLCNALEKKVPWQKNVVGDIASAVLQCRSGMGRRKGKMGHGDFKEETWLLF 96
Query: 671 MGPDRVGKKKMASALSELVSGA------SPIMIPLGPRRDHEEPEVRVRGK--------T 716
G D GK+K+A L+ ++ G+ S + R + E R K +
Sbjct: 97 QGNDLRGKEKVAEELARVIFGSATSNLVSITLSSFSSTRSADSTEDNCRNKRSRDEQSCS 156
Query: 717 ALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT 776
L++ EAV NP V L+ED+++AD + KRA+E GR+ +S G+++SL + I IL+
Sbjct: 157 YLERFAEAVSINPHRVFLVEDVEQADYSSQMGFKRAIEGGRITNSDGQQVSLADSIVILS 216
Query: 777 AD 778
+
Sbjct: 217 CE 218
>gi|222628845|gb|EEE60977.1| hypothetical protein OsJ_14761 [Oryza sativa Japonica Group]
Length = 636
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
MRAG T+QQ LT EAA+V+ ++ A RR + Q TPLHVA+ +LA P G LR AC++SH
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVTLARRRGNAQVTPLHVASAMLAPPGGLLRAACLRSH 60
Query: 61 PNSSHPLQCRALELCFSVALERLPTA 86
SHPLQC+ALELCF+VAL RLP +
Sbjct: 61 ---SHPLQCKALELCFNVALNRLPAS 83
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 24/187 (12%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR----GAGSKGDMWLLF 670
K L+ ++ K L +L ++V WQ+E VA+ V QC+ G KRR +K + WL F
Sbjct: 369 KELNAENLKLLCAALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDRSRSTEAKEETWLFF 428
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPL------------GPRRDHEEPEVRVRGKTA- 717
+G D GK+++A L+ LV G+ + + G DH + R R T
Sbjct: 429 LGGDGHGKERVARELAGLVFGSRKSFLSVKLGASSSSPSASGSTEDHHRSK-RPRTTTTS 487
Query: 718 ------LDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
L+++ +AV NP VIL+ED+++ D + +K A++RG L G E+ +G+
Sbjct: 488 SASEAYLERLYDAVSENPHRVILIEDVEQGDHRWQVGVKEAIDRGVLRSQAGDEVGVGDA 547
Query: 772 IFILTAD 778
I IL+ +
Sbjct: 548 IIILSCE 554
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 304 EVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAA 357
VV E+ L + GG +WL+G T +TY++C+ HPS+E+ W LQ + + A
Sbjct: 122 HVVTEVRALASCDGG----IWLVGFGTYQTYMKCRAGHPSLESMWGLQTLAVPA 171
>gi|413937154|gb|AFW71705.1| hypothetical protein ZEAMMB73_287089 [Zea mays]
Length = 647
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 75/111 (67%), Gaps = 10/111 (9%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL--ASPSGYLRQACIK 58
MRAG T+QQ L+PEAA V+ +++ A RR + Q TPLHVA+ +L +P+G LR AC++
Sbjct: 1 MRAGGCTVQQALSPEAAVVVKQAVSLARRRGNAQVTPLHVASAMLQQQAPTGLLRAACLQ 60
Query: 59 SHPNSSHPLQCRALELCFSVALERLPTAQQNVSPG-----LDPPISNALMA 104
SH SHPLQC+ALELCF+VAL RLP + + G P +SNAL A
Sbjct: 61 SH---SHPLQCKALELCFNVALNRLPASASPLLGGHGHVYYPPSLSNALHA 108
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 32/198 (16%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAG------------S 662
K L ++ K L +L ++V WQ E +A+TV QC+ G +RR A +
Sbjct: 361 KELSAENLKVLCSALEKEVPWQAEIVPEIASTVLQCRSGMARRREAAVSSSRPSSTQACA 420
Query: 663 KGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRR----------DHEEPEVRV 712
K D W+LF G D GK ++A L+ LV G+ + +G R D + R
Sbjct: 421 KEDTWMLFHGGDAEGKARVARELARLVFGSRKSFVSIGGSRTTASSPACWSDGSSEQQRK 480
Query: 713 RGK--------TALDKIGEAVKRNPFSVILLEDIDEADM-VVRGNIKRAMERGRLVDSYG 763
R + + + EAV+ NP VIL++D+++ + +I A++ G + G
Sbjct: 481 RPRLTEASNHGCRHESLYEAVRDNPHRVILVQDVEQGGCWRCQRDILEAIQSGLVRSRAG 540
Query: 764 -REISLGNVIFILTADWL 780
+ +LG+ I +L+ L
Sbjct: 541 DDDAALGDAIVVLSCQSL 558
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 304 EVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAA 357
VAE+ L R G G +WL+G + ++Y+RC+ PS+E W LQ + + A
Sbjct: 107 HAVAEVRALACRGGDG---VWLVGYGSYQSYMRCRAGQPSLETLWGLQTLAVPA 157
>gi|297721297|ref|NP_001173011.1| Os02g0537800 [Oryza sativa Japonica Group]
gi|255670974|dbj|BAH91740.1| Os02g0537800 [Oryza sativa Japonica Group]
Length = 686
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 74/119 (62%), Gaps = 19/119 (15%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL-----ASPSGYLRQA 55
MRAG T+QQ LT EAA+V+ +++ A RR + Q TPLHVA+ +L A G LR A
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLQAAGAAPAPGLLRAA 60
Query: 56 CIKSHPNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD----------PPISNALMA 104
C++SH SHPLQC+ALELCF+VAL RLP A SP L P +SNAL A
Sbjct: 61 CLRSH---SHPLQCKALELCFNVALNRLP-ASAGASPLLGHGHGVGVYYPPSLSNALHA 115
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 40/206 (19%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK----RRGAGS---KGDMW 667
K + ++ K L +L ++V WQ+ +A+TV +C+ G RR + K W
Sbjct: 392 KEVSAENLKVLCGALEKEVPWQKVIVPEIASTVLRCRSGMAAPAMARRSSSCSSSKEHTW 451
Query: 668 LLFMGPDRVGKKKMASALSELVSGASPIMIPLG--------------------------- 700
+LF+G D GK ++A L+ LV G+S + +G
Sbjct: 452 MLFLGGDADGKLRVARELASLVFGSSKSFVSIGGAANASPPPSSSSSSPARSSGSTEQPH 511
Query: 701 ----PRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAME-- 754
P + R + L+ + +AV+ NP VIL+E +D AD I+ A+E
Sbjct: 512 RSKRPWAETTTTTTSGRDQDHLEALYDAVRDNPRRVILMERVDRADARCHDGIRDAIERG 571
Query: 755 RGRLVDSYGREISLGNVIFILTADWL 780
R G E LG+ I +L+ + L
Sbjct: 572 VVRSRGGGGEEAFLGDAIVVLSCESL 597
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 304 EVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAA 357
VAE+ L GGGGG +WL+G T +T +RC+ HPS+E W L + + A
Sbjct: 114 HAVAEVRALACGGGGGGGGVWLVGHGTYQTNIRCRTGHPSLETLWGLHTLAVPA 167
>gi|293335257|ref|NP_001170618.1| uncharacterized protein LOC100384662 [Zea mays]
gi|238006394|gb|ACR34232.1| unknown [Zea mays]
Length = 440
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 35/199 (17%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR----GAGSKGDMWLLF 670
K L+ ++ K L +L ++V WQ+E VA+ V QC+ G KRR A +K + W+LF
Sbjct: 168 KELNAENLKLLCGALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDKSRSADAKEETWMLF 227
Query: 671 MGPDRVGKKKMASALSELVSG--ASPIMIPLG------------------------PRRD 704
+G D GK+++A L+ LV G +S + I G PR
Sbjct: 228 LGGDADGKERVARELARLVFGLRSSFLSIRPGGVVSASSPPPASSGSSEGHRSSKRPRMP 287
Query: 705 HEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGR 764
EEP L+++ EAV NP VI +ED++ AD + IK A+E G + + G+
Sbjct: 288 EEEPAAYY-----LERLHEAVSENPHRVIFMEDVERADRDCQLRIKEAIESGVVRNHAGQ 342
Query: 765 EISLGNVIFILTADWLPDS 783
E+ +G+ I IL+ + DS
Sbjct: 343 EVGVGDAIVILSCESFGDS 361
>gi|218190920|gb|EEC73347.1| hypothetical protein OsI_07555 [Oryza sativa Indica Group]
Length = 683
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 74/119 (62%), Gaps = 19/119 (15%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL-----ASPSGYLRQA 55
MRAG T+QQ LT EAA+V+ +++ A RR + Q TPLHVA+ +L A G LR A
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLQAAGAAPAPGLLRAA 60
Query: 56 CIKSHPNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD----------PPISNALMA 104
C++SH SHPLQC+ALELCF+VAL RLP A SP L P +SNAL A
Sbjct: 61 CLRSH---SHPLQCKALELCFNVALNRLP-ASAGASPLLGHGHGVGVYYPPSLSNALHA 115
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 40/206 (19%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK----RRGAGS---KGDMW 667
K + ++ K L +L ++V WQ+ +A+TV +C+ G RR + K W
Sbjct: 389 KEVSAENLKVLCGALEKEVPWQKVIVPEIASTVLRCRSGMAAPAMARRSSSCSSSKEHTW 448
Query: 668 LLFMGPDRVGKKKMASALSELVSGASPIMIPLG--------------------------- 700
+LF+G D GK ++A L+ LV G+S + +G
Sbjct: 449 MLFLGGDADGKLRVARELASLVFGSSKSFVSIGGAANASPPPSSSSSSPARSSGFTEQPH 508
Query: 701 ----PRRDHEEPEVRVRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAME-- 754
P + R + L+ + +AV+ NP VIL+E +D AD I+ A+E
Sbjct: 509 RSKRPWAETTTTTTSGRDQDHLEALYDAVRDNPRRVILMERVDRADARCHDGIRDAIERG 568
Query: 755 RGRLVDSYGREISLGNVIFILTADWL 780
R G E LG+ I +L+ + L
Sbjct: 569 VVRSRGGGGEEAFLGDAIVVLSCESL 594
>gi|222623004|gb|EEE57136.1| hypothetical protein OsJ_07038 [Oryza sativa Japonica Group]
Length = 663
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 74/119 (62%), Gaps = 19/119 (15%)
Query: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLL-----ASPSGYLRQA 55
MRAG T+QQ LT EAA+V+ +++ A RR + Q TPLHVA+ +L A G LR A
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLQAAGAAPAPGLLRAA 60
Query: 56 CIKSHPNSSHPLQCRALELCFSVALERLPTAQQNVSPGLD----------PPISNALMA 104
C++SH SHPLQC+ALELCF+VAL RLP A SP L P +SNAL A
Sbjct: 61 CLRSH---SHPLQCKALELCFNVALNRLP-ASAGASPLLGHGHGVGVYYPPSLSNALHA 115
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 304 EVVAEIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKT 359
VAE+ L GGGGG +WL+G T +T +RC+ HPS+E W L + + A +
Sbjct: 114 HAVAEVRALACGGGGGGGGVWLVGHGTYQTNIRCRTGHPSLETLWGLHTLAVPAGS 169
>gi|326520325|dbj|BAK07421.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 431
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 18/182 (9%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR----GAGSKGDMWLLF 670
K L+ ++ K L +L ++V WQ+E +A+TV QC+ G KRR +K + W+ F
Sbjct: 176 KELNAENLKLLCAALEKEVPWQKEIVPEIASTVLQCRSGIAKRRDKSRSTDAKEETWMFF 235
Query: 671 MGPDRVGKKKMASALSELVSGASP--IMIPLGPR--------RDHEEPEVRV----RGKT 716
+G D GK+++AS L+ LV G+ + I LG +H R G+
Sbjct: 236 LGGDADGKERVASELANLVFGSRKNFVSIKLGASSTSASCSTEEHRSKRPRTSTASEGEA 295
Query: 717 ALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT 776
L+++ +AV NP VIL+++ ++AD + IK A++ G + G E+ + + I IL
Sbjct: 296 YLERLYDAVSENPHRVILMDNFEQADQYCQVGIKEAIDSGVIRSQTGDEVGVSDAIVILC 355
Query: 777 AD 778
+
Sbjct: 356 CE 357
>gi|125548248|gb|EAY94070.1| hypothetical protein OsI_15846 [Oryza sativa Indica Group]
Length = 476
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 24/187 (12%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR----GAGSKGDMWLLF 670
K L+ ++ K L +L ++V WQ+E VA+ V QC+ G KRR +K + WL F
Sbjct: 209 KELNAENLKLLCAALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDRSRSTEAKEETWLFF 268
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPL------------GPRRDHEEPEVRVRGKTA- 717
+G D GK+++A L+ LV G+ + + G DH + R R T
Sbjct: 269 LGGDGHGKERVARELAGLVFGSRKSFLSVKLGASSSSPSASGSTEDHHRSK-RPRTTTTS 327
Query: 718 ------LDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
L+++ +AV NP VIL+ED+++ D + +K A++RG L G E+ +G+
Sbjct: 328 SASEAYLERLYDAVSENPHRVILIEDVEQGDHRWQVGVKEAIDRGVLRSQAGDEVGVGDA 387
Query: 772 IFILTAD 778
I IL+ +
Sbjct: 388 IIILSCE 394
>gi|115458330|ref|NP_001052765.1| Os04g0416500 [Oryza sativa Japonica Group]
gi|113564336|dbj|BAF14679.1| Os04g0416500, partial [Oryza sativa Japonica Group]
Length = 608
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 24/187 (12%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRR----GAGSKGDMWLLF 670
K L+ ++ K L +L ++V WQ+E VA+ V QC+ G KRR +K + WL F
Sbjct: 341 KELNAENLKLLCAALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDRSRSTEAKEETWLFF 400
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPL------------GPRRDHEEPEVRVRGKTA- 717
+G D GK+++A L+ LV G+ + + G DH + R R T
Sbjct: 401 LGGDGHGKERVARELAGLVFGSRKSFLSVKLGASSSSPSASGSTEDHHRSK-RPRTTTTS 459
Query: 718 ------LDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
L+++ +AV NP VIL+ED+++ D + +K A++RG L G E+ +G+
Sbjct: 460 SASEAYLERLYDAVSENPHRVILIEDVEQGDHRWQVGVKEAIDRGVLRSQAGDEVGVGDA 519
Query: 772 IFILTAD 778
I IL+ +
Sbjct: 520 IIILSCE 526
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 251 KLKDLGALIETKFGNGDGVILDLGDLKWLVEQQVTSFGVPNSGTLQQQQQVLA---EVVA 307
+L +L L++++ G V+L + DLKW + + VV
Sbjct: 41 RLAELRCLVKSR---GARVLLVVEDLKWAADFWAAAHAGARRVGSGGGGGYYCSVEHVVT 97
Query: 308 EIGKLVARFGGGGGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAA 357
E+ L + GG +WL+G T +TY++C+ HPS+E+ W LQ + + A
Sbjct: 98 EVRALASCDGG----IWLVGFGTYQTYMKCRAGHPSLESMWGLQTLAVPA 143
>gi|319789343|ref|YP_004150976.1| ATPase AAA-2 domain protein [Thermovibrio ammonificans HB-1]
gi|317113845|gb|ADU96335.1| ATPase AAA-2 domain protein [Thermovibrio ammonificans HB-1]
Length = 824
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 113/230 (49%), Gaps = 23/230 (10%)
Query: 612 QLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFM 671
QLQ+ + + KRL + L ++V Q EA AVA + + +LG R ++ LF+
Sbjct: 487 QLQEK-EAEKLKRLEEELHKRVVGQHEAVEAVAKAIKRSRLGI---RANVNRPIGCFLFL 542
Query: 672 GPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGE 723
GP VGK ++A AL+E + G +I + E+ V G ++ E
Sbjct: 543 GPTGVGKTELAKALAEYLFGDEKALIRIDMSEYMEKHSVSRLIGSPPGYVGYEEGGQLTE 602
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDS 783
AV+R P+SVILL++I++A V + + ME GRL D GR +S N I I+T++
Sbjct: 603 AVRRKPYSVILLDEIEKAHPDVLNILLQIMEDGRLTDGLGRTVSFTNTILIMTSNLGAKH 662
Query: 784 LKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKP 833
L +G+ + +A G+ + R R K+ LDE +R KP
Sbjct: 663 LISAQRGMGFE------VADGKEEERSFERMKSL-----VLDEVKRYFKP 701
>gi|239617275|ref|YP_002940597.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
gi|239506106|gb|ACR79593.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
Length = 794
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 26/222 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL ES+ D+L K L K + E+ Q+EA SAVA T+ + + G R
Sbjct: 485 PAGKLLESERDKL---------KNLEKLIHERFIDQEEAVSAVAHTIRRARAGLKAPNRP 535
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A L+ ++ G+ MI + E+ V
Sbjct: 536 WGS-----FLFLGPTGVGKTELAKTLANILFGSEDAMIRIDMSEYMEKHSVSRLIGAPPG 590
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P+SVILL+++++A V + + M+ GRL D G+ ++ N
Sbjct: 591 YVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPDVHNVLLQVMDDGRLTDGKGKTVNFSNT 650
Query: 772 IFILTADWLPDSL---KFLSQGITLDEKKLTSLASGEWQLRL 810
I I+T++ + + KF L E+KL S E+ RL
Sbjct: 651 ILIMTSNVGSEEMTKGKFDENTTALVEQKLKSAFKPEFLNRL 692
>gi|89099328|ref|ZP_01172205.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
sp. NRRL B-14911]
gi|89085937|gb|EAR65061.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
sp. NRRL B-14911]
Length = 708
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 27/260 (10%)
Query: 528 FQPKVQLNRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIE 587
+ P ++ + L + ++ + E+A ++ ++ L E HI+
Sbjct: 329 YTPGEEIEQKLAEISAAKEEVLKKEDYEKAAKLREQEIKLEIALNNDSAKRPVVEAGHIQ 388
Query: 588 PVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTV 647
+ + I P K+ + + ++ K L KSL EKV Q+EA VA V
Sbjct: 389 EIIERKTGI----PVGKIQQDEQSKM---------KNLEKSLSEKVIGQEEAVKKVAKAV 435
Query: 648 TQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
+ + G K R GS LF+GP VGK ++ L+E + G+ MI L E
Sbjct: 436 RRSRAGLKSKNRPIGS-----FLFVGPTGVGKTELTKTLAEELFGSKDSMIRLDMSEYME 490
Query: 707 EPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
+ + G ++ E V+RNP+S+ILL++I++A V+ + +E GRL
Sbjct: 491 KHSISKIIGSPPGYVGHDEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRL 550
Query: 759 VDSYGREISLGNVIFILTAD 778
DS GR +S + + I+T++
Sbjct: 551 TDSQGRTVSFKDSVIIMTSN 570
>gi|297804822|ref|XP_002870295.1| hypothetical protein ARALYDRAFT_915385 [Arabidopsis lyrata subsp.
lyrata]
gi|297316131|gb|EFH46554.1| hypothetical protein ARALYDRAFT_915385 [Arabidopsis lyrata subsp.
lyrata]
Length = 920
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 125/252 (49%), Gaps = 25/252 (9%)
Query: 548 MVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHE 607
M++ Q AER + P DL G + +ESA K + VKD + + P+N + E
Sbjct: 515 MIALQEAERQ---YDLPKAADLRYGAIQEVESAIAKLE-KSVKDNVMLTETVGPEN-IAE 569
Query: 608 SQNDQLQKP---LDPDSFKRLLK---SLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGA 660
+ P LD + KRL+ L E+V Q EA AVA + + ++G G+ ++ +
Sbjct: 570 VVSRWTGIPVTALDQNEKKRLISLADRLHERVVGQDEAVKAVAAAILRSRVGLGRPQQPS 629
Query: 661 GSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------V 712
GS LF+GP VGK ++A AL+E + +++ L + V
Sbjct: 630 GS-----FLFLGPTGVGKTELAKALAEQLFYDENLLVRLDMSEYMDRSTVNKLIGAPPGY 684
Query: 713 RGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVI 772
G ++ E V+R P+ V+L +++++A++ V + + +E GRL DS+GR + N +
Sbjct: 685 IGHEEGGQLTEPVRRRPYCVVLFDEVEKANVTVFNTLLQVLEDGRLTDSHGRTVDFKNTV 744
Query: 773 FILTADWLPDSL 784
I+T++ D L
Sbjct: 745 IIMTSNLGADHL 756
>gi|238924658|ref|YP_002938174.1| ATPase AAA-2 [Eubacterium rectale ATCC 33656]
gi|238876333|gb|ACR76040.1| ATPase AAA-2 [Eubacterium rectale ATCC 33656]
Length = 818
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 105/209 (50%), Gaps = 26/209 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL ES+ +L K L + L ++V Q+EA SAVA V + ++G ++
Sbjct: 497 PVNKLTESEAGRLAK---------LEQILHKRVIGQEEAVSAVAKAVRRGRVGLKDPKKP 547
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ AL+E V G MI + E+ V
Sbjct: 548 IGS-----FLFLGPTGVGKTEVSKALAEAVFGKEDAMIRVDMSEYMEKHSVSKMIGSPPG 602
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNPFSVIL ++I++A V + + ++ GR+ DS GR + N
Sbjct: 603 YVGHEEGGQLSEKVRRNPFSVILFDEIEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNT 662
Query: 772 IFILTADWLPDSL---KFLSQGITLDEKK 797
I I+T++ S+ K L G DEK+
Sbjct: 663 IIIMTSNAGASSIIEPKRLGFGAGEDEKQ 691
>gi|403235214|ref|ZP_10913800.1| ATPase AAA [Bacillus sp. 10403023]
Length = 711
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E++ ++ K L ++L +KV Q+EA + VA V + + G K R
Sbjct: 400 PVGKLQENEQQKM---------KHLAENLAKKVIGQEEAVTKVAKAVRRSRAGLKAKTRP 450
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++ L+E + G+ MI L E+ V
Sbjct: 451 IGS-----FLFVGPTGVGKTELTKTLAEELFGSKDAMIRLDMSEYMEKHSVSKIIGSPPG 505
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+S+ILL++I++A V+ + +E GRL DS GR +S +
Sbjct: 506 YVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDT 565
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 566 VIIMTSN 572
>gi|350546248|ref|ZP_08915643.1| ATP-dependent protease binding subunit [Mycoplasma iowae 695]
gi|349504183|gb|EGZ31731.1| ATP-dependent protease binding subunit [Mycoplasma iowae 695]
Length = 710
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 119/239 (49%), Gaps = 33/239 (13%)
Query: 589 VKDFLGCIS--------SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAA 640
+KDF+ + ++ P +K+ E + D+L K L +L++++ Q EA
Sbjct: 384 IKDFVDDVDVAEIISRMTKIPLDKIFEKEQDKL---------KNLKANLLKRIKGQDEAV 434
Query: 641 SAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPL 699
+AV TV + ++G N R GS LF+GP VGK ++A AL++ + + MI L
Sbjct: 435 TAVVNTVLKNRVGINNPNRPIGS-----FLFVGPTGVGKTELAKALADNLFNSEKAMIRL 489
Query: 700 GPRRDHEEPEVRVR-----GKTALDKIGE---AVKRNPFSVILLEDIDEADMVVRGNIKR 751
E+ V G D+ GE V+R P+S++LL++I++A + + +
Sbjct: 490 NMSEYMEKHSVSRLIGAPPGYVGYDQAGELSEGVRRKPYSIVLLDEIEKAHPDILNILLQ 549
Query: 752 AMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRL 810
++ G L DS+GR I+ N I I+T++ SL + + + EK++ E+ R+
Sbjct: 550 ILDDGMLKDSHGRNINFKNTIIIMTSNV--GSLSIIENKMDIFEKEMKVAFKPEFINRI 606
>gi|294498032|ref|YP_003561732.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Bacillus
megaterium QM B1551]
gi|294347969|gb|ADE68298.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Bacillus
megaterium QM B1551]
Length = 704
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E+++ ++ K L + L +KV QQEA VA + + + G K R
Sbjct: 393 PVGKLQENESAKM---------KHLAEHLAQKVIGQQEAVEKVAKAIRRSRAGLKAKHRP 443
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++ L+E + G+ M+ L E+ V
Sbjct: 444 IGS-----FLFVGPTGVGKTELTKTLAEELFGSKDAMVRLDMSEYMEKHAVSKLIGSPPG 498
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+S+ILL++I++A V+ + +E GRL DS GR +S +
Sbjct: 499 YVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDT 558
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 559 VIIMTSN 565
>gi|295703385|ref|YP_003596460.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
megaterium DSM 319]
gi|294801044|gb|ADF38110.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Bacillus
megaterium DSM 319]
Length = 704
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E+++ ++ K L + L +KV QQEA VA + + + G K R
Sbjct: 393 PVGKLQENESAKM---------KHLAEHLAQKVIGQQEAVEKVAKAIRRSRAGLKAKHRP 443
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++ L+E + G+ M+ L E+ V
Sbjct: 444 IGS-----FLFVGPTGVGKTELTKTLAEELFGSKDAMVRLDMSEYMEKHAVSKLIGSPPG 498
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+S+ILL++I++A V+ + +E GRL DS GR +S +
Sbjct: 499 YVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDT 558
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 559 VIIMTSN 565
>gi|384048146|ref|YP_005496163.1| ATPase [Bacillus megaterium WSH-002]
gi|345445837|gb|AEN90854.1| ATPase AAA-2 domain protein [Bacillus megaterium WSH-002]
Length = 704
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E+++ ++ K L + L +KV QQEA VA + + + G K R
Sbjct: 393 PVGKLQENESAKM---------KHLAEHLAQKVIGQQEAVEKVAKAIRRSRAGLKAKHRP 443
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++ L+E + G+ M+ L E+ V
Sbjct: 444 IGS-----FLFVGPTGVGKTELTKTLAEELFGSKDAMVRLDMSEYMEKHAVSKLIGSPPG 498
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+S+ILL++I++A V+ + +E GRL DS GR +S +
Sbjct: 499 YVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDT 558
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 559 VIIMTSN 565
>gi|383780572|ref|YP_005465138.1| putative ATPase associated with various cellular activities
[Actinoplanes missouriensis 431]
gi|381373804|dbj|BAL90622.1| putative ATPase associated with various cellular activities
[Actinoplanes missouriensis 431]
Length = 867
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 113/232 (48%), Gaps = 23/232 (9%)
Query: 597 SSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK 656
S+ P +L E++ D+L RL + L E V Q++A AVA V + + G G
Sbjct: 536 STGVPVAQLTEAERDRLL---------RLEQHLHEHVIGQEDAVEAVAEAVRRSRAGLGD 586
Query: 657 R-RGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRG 714
R GS LF+GP VGK ++A +L+E + G MI L E V R+ G
Sbjct: 587 EDRPVGS-----FLFLGPTGVGKTELARSLAEALFGEPDRMIRLDMSEFQERHTVSRLVG 641
Query: 715 K----TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREIS 767
D+ G EAV+R P+SV+LL++I++A V + + ++ GRL DS GR +S
Sbjct: 642 APPGYVGYDEAGQLTEAVRRRPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVS 701
Query: 768 LGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTKR 819
N + I+T++ D + ++ + A E + RL R K + R
Sbjct: 702 FKNTVLIMTSNLGSDLITGSTRSVGFGAAAGGRSADDELRDRLDRRLKESLR 753
>gi|325295444|ref|YP_004281958.1| ATPase AAA [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065892|gb|ADY73899.1| ATPase AAA-2 domain protein [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 820
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 16/178 (8%)
Query: 612 QLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG--NGKRRGAGSKGDMWLL 669
QLQ+ + + RL L ++V Q+EA AVA + + +LG + +R GS L
Sbjct: 487 QLQEK-EAEKLLRLEGELHKRVVGQEEAVKAVAKAIKRSRLGIRSSAQRPIGS-----FL 540
Query: 670 FMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKI 721
F+GP VGK ++A AL+E + G MI + E+ V G ++
Sbjct: 541 FLGPTGVGKTELAKALAEALFGDEKAMIRIDMSEYMEKHTVSRLIGAPPGYIGYEEGGQL 600
Query: 722 GEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
EAV+R P++VILL++I++A V + + ME GRL D GR +S N I I+T++
Sbjct: 601 TEAVRRKPYTVILLDEIEKAHPDVLNILLQIMEDGRLTDGLGRTVSFTNAILIMTSNL 658
>gi|312111885|ref|YP_003990201.1| ATPase AAA [Geobacillus sp. Y4.1MC1]
gi|311216986|gb|ADP75590.1| ATPase AAA-2 domain protein [Geobacillus sp. Y4.1MC1]
Length = 720
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ + K L ++L +KV Q+EA VA + + + G K R GS LF+GP V
Sbjct: 413 EKEKMKHLEENLAKKVIGQEEAVKKVAKAIRRSRAGLKAKHRPVGS-----FLFVGPTGV 467
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK ++A L+E + G+ MI L E+ V G ++ G E V+RN
Sbjct: 468 GKTELAKTLAEELFGSKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRN 527
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S+ILL++I++A V+ + +E GRL DS GR +S + + I T++
Sbjct: 528 PYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 577
>gi|239826400|ref|YP_002949024.1| ATPase AAA [Geobacillus sp. WCH70]
gi|239806693|gb|ACS23758.1| ATPase AAA-2 domain protein [Geobacillus sp. WCH70]
Length = 725
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ + K L ++L +KV Q+EA VA + + + G K R GS LF+GP V
Sbjct: 419 EKEKMKHLEENLAKKVIGQEEAVKKVAKAIRRSRAGLKAKHRPIGS-----FLFVGPTGV 473
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A L+E + G+ MI L E+ V G ++ E V+RN
Sbjct: 474 GKTELAKTLAEELFGSKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRN 533
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S+ILL++I++A V+ + +E GRL DS GR +S + + I T++
Sbjct: 534 PYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 583
>gi|336236273|ref|YP_004588889.1| ATPase AAA-2 domain-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|335363128|gb|AEH48808.1| ATPase AAA-2 domain protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 720
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ + K L ++L +KV Q+EA VA + + + G K R GS LF+GP V
Sbjct: 413 EKEKMKHLEENLAKKVIGQEEAVKKVAKAIRRSRAGLKAKHRPIGS-----FLFVGPTGV 467
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK ++A L+E + G+ MI L E+ V G ++ G E V+RN
Sbjct: 468 GKTELAKTLAEELFGSKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRN 527
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S+ILL++I++A V+ + +E GRL DS GR +S + + I T++
Sbjct: 528 PYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 577
>gi|423720794|ref|ZP_17694976.1| ATP-dependent Clp protease, ATP-binding subunit [Geobacillus
thermoglucosidans TNO-09.020]
gi|383366147|gb|EID43438.1| ATP-dependent Clp protease, ATP-binding subunit [Geobacillus
thermoglucosidans TNO-09.020]
Length = 720
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ + K L ++L +KV Q+EA VA + + + G K R GS LF+GP V
Sbjct: 413 EKEKMKHLEENLAKKVIGQEEAVKKVAKAIRRSRAGLKAKHRPIGS-----FLFVGPTGV 467
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK ++A L+E + G+ MI L E+ V G ++ G E V+RN
Sbjct: 468 GKTELAKTLAEELFGSKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRN 527
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S+ILL++I++A V+ + +E GRL DS GR +S + + I T++
Sbjct: 528 PYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 577
>gi|415886364|ref|ZP_11548144.1| ATPase AAA-2 domain protein [Bacillus methanolicus MGA3]
gi|387587051|gb|EIJ79374.1| ATPase AAA-2 domain protein [Bacillus methanolicus MGA3]
Length = 720
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + +++ K L +L KV Q+EA VA + + + G K R
Sbjct: 409 PVGKLQEDEQEKM---------KNLETNLAAKVIGQEEAVRKVAKAIRRSRAGLKSKNRP 459
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++ AL+E + G MI L E+ V
Sbjct: 460 IGS-----FLFVGPTGVGKTELTKALAEELFGTKDAMIRLDMSEYMEKHSVSKIIGSPPG 514
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+S+ILL++I++A V+ + +E GRL DS GR +S +
Sbjct: 515 YVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDT 574
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 575 VIIMTSN 581
>gi|345022219|ref|ZP_08785832.1| ATP-dependent Clp proteinase [Ornithinibacillus scapharcae TW25]
Length = 712
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KLH + +++ K L ++L +KV Q EA VA + + + G K R
Sbjct: 403 PVTKLHADEQEKM---------KNLTENLGKKVIGQNEAVGKVAKAIRRSRAGLKSKHRP 453
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++ AL+E + G MI L E+ V
Sbjct: 454 IGS-----FLFVGPTGVGKTELTKALAEELFGTREAMIRLDMSEYMEKHSVSKIIGAPPG 508
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R+P+S+ILL++I++A V+ + ME G L DS GR++S +
Sbjct: 509 YVGHDEAGQLTERVRRSPYSIILLDEIEKAHPDVQNMFLQIMEDGHLTDSQGRKVSFKDT 568
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 569 VIIMTSN 575
>gi|114567873|ref|YP_755027.1| ATPase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114338808|gb|ABI69656.1| ATPases with chaperone activity, ATP-binding subunit
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 828
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 23/194 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E ++++L + D L ++V Q+EA AV+ V + + G +R
Sbjct: 505 PVNKLAEEESERLVQMED---------VLHQRVIGQEEAVKAVSRAVRRARAGLKNPKRP 555
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS +F+GP VGK ++A +L+E + G+ +I L E+ V G
Sbjct: 556 IGS-----FVFLGPTGVGKTELARSLAEAMFGSEDAIIRLDMSEYMEKHAVSRMIGSPPG 610
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+R P+SVILL++I++A V + + ME GRL D GR + N
Sbjct: 611 YVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVMEDGRLTDGQGRTVDFRNT 670
Query: 772 IFILTADWLPDSLK 785
+ I+T++ DS+K
Sbjct: 671 VVIMTSNVGADSIK 684
>gi|288555417|ref|YP_003427352.1| AAA ATPase [Bacillus pseudofirmus OF4]
gi|288546577|gb|ADC50460.1| AAA-2 domain ATPase modulates CtsR MecA [Bacillus pseudofirmus OF4]
Length = 718
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D + K L L KV Q++A VA V + + G K R GS LF+GP V
Sbjct: 416 DQEKMKNLADQLRGKVIGQEKAVEKVAKAVRRSRAGLKAKHRPIGS-----FLFVGPTGV 470
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK ++ +L+E + G M+ L E+ V G D+ G E V+RN
Sbjct: 471 GKTELTKSLAEQLFGTKEAMVRLDMSEYMEKHSVSKLIGSPPGYVGHDEAGQLTEKVRRN 530
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S+ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 531 PYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 580
>gi|212639808|ref|YP_002316328.1| ATP-dependent Clp protease-like protein [Anoxybacillus flavithermus
WK1]
gi|212561288|gb|ACJ34343.1| ATP-dependent Clp protease-like protein [Anoxybacillus flavithermus
WK1]
Length = 721
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L ++L +KV Q+EA +A + + + G K R GS LF+GP VGK +
Sbjct: 435 MKHLEENLAKKVIGQEEAVRKIAKAIRRSRAGLKAKNRPIGS-----FLFVGPTGVGKTE 489
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L+E + G++ MI L E+ V G ++ E V+RNP+S+
Sbjct: 490 LSKTLAEQLFGSTDAMIRLDMSEYMEKHAVSKLIGAPPGYVGHEEAGQLTEKVRRNPYSI 549
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL+++++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 550 ILLDEMEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 595
>gi|365156940|ref|ZP_09353224.1| hypothetical protein HMPREF1015_00634 [Bacillus smithii 7_3_47FAA]
gi|363626203|gb|EHL77202.1| hypothetical protein HMPREF1015_00634 [Bacillus smithii 7_3_47FAA]
Length = 720
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
+ K L ++L +KV Q EA VA + + + G K R GS LF+GP VGK
Sbjct: 420 EKMKHLEENLAKKVIGQDEAVKKVAKAIKRSRAGLKAKNRPIGS-----FLFVGPTGVGK 474
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPF 730
+++ L+E + G+ MI L E+ V G ++ E V+RNP+
Sbjct: 475 TELSKTLAEELFGSKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPY 534
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
S+ILL++I++A V+ + +E GRL DS GR +S + + I T++
Sbjct: 535 SIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIATSN 582
>gi|212637926|ref|YP_002314446.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
gi|212559406|gb|ACJ32461.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
Length = 813
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 27/209 (12%)
Query: 589 VKDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
V+D +SS P +KL +++ ++L K L + L +V Q+EA AVA
Sbjct: 476 VEDIAAVVSSWTGIPVSKLAQTETERLLK---------LEEILHSRVIGQEEAVKAVAKA 526
Query: 647 VTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDH 705
V + + G +R GS +F+GP VGK ++A AL+E + G MI + ++
Sbjct: 527 VRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAEAMFGDEDAMIRI-DMSEY 580
Query: 706 EEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERG 756
E R G ++ G E V+R P+SVILL++I++A V + + +E G
Sbjct: 581 MEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDG 640
Query: 757 RLVDSYGREISLGNVIFILTADWLPDSLK 785
RL DS GR + N I I+T++ D+LK
Sbjct: 641 RLTDSKGRTVDFRNTIIIMTSNVGADALK 669
>gi|433447284|ref|ZP_20410881.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
gi|431999948|gb|ELK20855.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
Length = 810
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 27/209 (12%)
Query: 589 VKDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
V+D +SS P +KL +++ ++L K L + L +V Q+EA AVA
Sbjct: 473 VEDIAAVVSSWTGIPVSKLAQTETERLLK---------LEEILHSRVIGQEEAVKAVAKA 523
Query: 647 VTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDH 705
V + + G +R GS +F+GP VGK ++A AL+E + G MI + ++
Sbjct: 524 VRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAEAMFGDEDAMIRI-DMSEY 577
Query: 706 EEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERG 756
E R G ++ G E V+R P+SVILL++I++A V + + +E G
Sbjct: 578 MEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDG 637
Query: 757 RLVDSYGREISLGNVIFILTADWLPDSLK 785
RL DS GR + N I I+T++ D+LK
Sbjct: 638 RLTDSKGRTVDFRNTIIIMTSNVGADALK 666
>gi|433446336|ref|ZP_20410395.1| ATP-dependent Clp protease, ATP-binding subunitClpE [Anoxybacillus
flavithermus TNO-09.006]
gi|432000632|gb|ELK21526.1| ATP-dependent Clp protease, ATP-binding subunitClpE [Anoxybacillus
flavithermus TNO-09.006]
Length = 700
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L ++L +KV Q+EA +A + + + G K R GS LF+GP VGK +
Sbjct: 410 MKHLEENLAKKVIGQEEAVRKIAKAIRRSRAGLKAKNRPIGS-----FLFVGPTGVGKTE 464
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L+E + G+ MI L E+ V G ++ E V+RNP+S+
Sbjct: 465 LSKTLAEQLFGSKDAMIRLDMSEYMEKHAVSKLIGAPPGYIGHEEAGQLTEKVRRNPYSI 524
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL+++++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 525 ILLDEMEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 570
>gi|427390984|ref|ZP_18885390.1| hypothetical protein HMPREF9233_00893 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732322|gb|EKU95132.1| hypothetical protein HMPREF9233_00893 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 866
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 595 CISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG- 653
+S+ P KL E+++++L R+ L ++V Q EA +A++ + + + G
Sbjct: 486 SMSTGIPVFKLSEAESEKLL---------RMEDELHKRVIGQHEAVTAISQAIRRQRAGL 536
Query: 654 NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-- 711
R GS +F GP VGK ++A AL+E + G +I L E+ V
Sbjct: 537 KDPNRPGGS-----FIFAGPTGVGKTELAKALAEFLFGDESALITLDMSEYSEKHTVSRL 591
Query: 712 ------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGRE 765
G ++ EAV+R PFSV+L ++I++A + ++ + +E GRL DS GR
Sbjct: 592 FGAPPGYVGYEEGGQLTEAVRRKPFSVVLFDEIEKAHADLFNSLLQILEEGRLTDSQGRV 651
Query: 766 ISLGNVIFILTADW-LPDSLKFLSQGITLDEKKLTS 800
+ N I I+T + D K + G D+ TS
Sbjct: 652 VDFKNTIIIMTTNLGTKDIAKGVQTGFQFDQDTTTS 687
>gi|297530841|ref|YP_003672116.1| ATPase AAA [Geobacillus sp. C56-T3]
gi|297254093|gb|ADI27539.1| ATPase AAA-2 domain protein [Geobacillus sp. C56-T3]
Length = 712
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ + K L ++L +KV Q EA VA + + + G K R GS LF+GP V
Sbjct: 409 EKEKMKHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGS-----FLFVGPTGV 463
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK ++A L+E + G MI L E+ V G ++ G E V+RN
Sbjct: 464 GKTELAKTLAEELFGTKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRN 523
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S+ILL++I++A V+ + +E GRL DS GR +S + + I T++
Sbjct: 524 PYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 573
>gi|261419190|ref|YP_003252872.1| ATPase AAA [Geobacillus sp. Y412MC61]
gi|261375647|gb|ACX78390.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC61]
Length = 712
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ + K L ++L +KV Q EA VA + + + G K R GS LF+GP V
Sbjct: 409 EKEKMKHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGS-----FLFVGPTGV 463
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK ++A L+E + G MI L E+ V G ++ G E V+RN
Sbjct: 464 GKTELAKTLAEELFGTKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRN 523
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S+ILL++I++A V+ + +E GRL DS GR +S + + I T++
Sbjct: 524 PYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 573
>gi|359492653|ref|XP_003634451.1| PREDICTED: GTP-binding protein YPT53-like [Vitis vinifera]
Length = 302
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 13/101 (12%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKM 681
FK L ++L E++ WQ EA S ++ T+ C+LGN KR GA K D+W F+GPDR +KK+
Sbjct: 30 FKTLFRALTERIDWQPEAISVISETIACCRLGNEKRHGASPKEDIWFNFVGPDRFNRKKI 89
Query: 682 ASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG 722
AL+E+ ++ +VR RGK ++ I
Sbjct: 90 DVALAEIF-------------QEMNGYKVRFRGKNMVNYIA 117
>gi|319766006|ref|YP_004131507.1| ATPase AAA [Geobacillus sp. Y412MC52]
gi|317110872|gb|ADU93364.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC52]
Length = 712
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ + K L ++L +KV Q EA VA + + + G K R GS LF+GP V
Sbjct: 409 EKEKMKHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGS-----FLFVGPTGV 463
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK ++A L+E + G MI L E+ V G ++ G E V+RN
Sbjct: 464 GKTELAKTLAEELFGTKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRN 523
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S+ILL++I++A V+ + +E GRL DS GR +S + + I T++
Sbjct: 524 PYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 573
>gi|319649805|ref|ZP_08003958.1| ATP-dependent Clp protease-like protein [Bacillus sp. 2_A_57_CT2]
gi|317398559|gb|EFV79244.1| ATP-dependent Clp protease-like protein [Bacillus sp. 2_A_57_CT2]
Length = 714
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + +++Q L +SL EKV Q EA V+ + + + G K R
Sbjct: 403 PVGKLAEDEQEKMQ---------NLEESLAEKVIGQAEAVQKVSKAIRRSRAGLKSKDRP 453
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++ L++ + G+ MI L E+ V
Sbjct: 454 IGS-----FLFVGPTGVGKTELTKTLAQELFGSKESMIRLDMSEYMEKHSVSKIIGSPPG 508
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+S+ILL++I++A V+ + +E GRL DS GR +S +
Sbjct: 509 YVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDT 568
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 569 VIIMTSN 575
>gi|389865263|ref|YP_006367504.1| genetic competence negative regulator ClpC/MecB [Modestobacter
marinus]
gi|388487467|emb|CCH89025.1| Negative regulator of genetic competence ClpC/MecB [Modestobacter
marinus]
Length = 851
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGK 678
D RL L E+V Q EA VA + + + G G R GS LF+GP VGK
Sbjct: 526 DRLLRLEDVLHERVVGQDEAVEVVAEAIRRSRAGLGDPDRPIGS-----FLFLGPTGVGK 580
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPF 730
++A AL+E + G S M+ L E V G ++ EAV+R P+
Sbjct: 581 TELARALAEALFGDSDRMVRLDMSEFQERHTVSRLVGSPPGYVGYEDAGQLTEAVRRRPY 640
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
SV+LL++I++A V + + ++ GRL DS GR + N + I+T++
Sbjct: 641 SVVLLDEIEKAHPDVFNTLLQLLDAGRLTDSQGRTVDFSNTVVIMTSN 688
>gi|283779663|ref|YP_003370418.1| ATPase AAA [Pirellula staleyi DSM 6068]
gi|283438116|gb|ADB16558.1| ATPase AAA-2 domain protein [Pirellula staleyi DSM 6068]
Length = 852
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 624 RLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKK 679
RL+K L +KV Q +A +A+A V + + G RR AG +F GP VGK
Sbjct: 519 RLMKMEEELHKKVISQDQAVTAIAKAVRRTRSGLKDPRRPAG-----CFVFAGPTGVGKT 573
Query: 680 KMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFS 731
+A AL+E + G + +I + E+ V G ++ E ++R P++
Sbjct: 574 LLAKALAEFMFGDADALIQIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQLTEKIRRRPYA 633
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
V+LL++I++A V + + ME GRL DS+GR + NVI I+T + +++K
Sbjct: 634 VVLLDEIEKAHPDVFNTLLQVMEEGRLTDSFGRRVDFRNVILIMTTNAGAEAIK 687
>gi|227872597|ref|ZP_03990933.1| ATPase with chaperone activity, ATP-binding subunit [Oribacterium
sinus F0268]
gi|227841598|gb|EEJ51892.1| ATPase with chaperone activity, ATP-binding subunit [Oribacterium
sinus F0268]
Length = 827
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E++ ++L K L L E+V Q EA AVA + + ++G +R
Sbjct: 494 PTKKLEETETERL---------KNLENLLHERVIGQNEAVKAVAQAIKRGRVGLKDPKRP 544
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS +F+GP VGK +++ A++E++ G+ +I + E+ V G
Sbjct: 545 IGS-----FMFLGPTGVGKTELSKAIAEVIFGSEQNLIRVDMSEYMEKYSVSKMIGSPPG 599
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+RNP+SVIL ++I++A V + + ++ G + DS GR++S N
Sbjct: 600 YVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVLNILLQVLDDGHITDSQGRKVSFKNT 659
Query: 772 IFILTAD 778
I I+T++
Sbjct: 660 IIIMTSN 666
>gi|418683784|ref|ZP_13244979.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|400324533|gb|EJO76827.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
Length = 771
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 410 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQTEAIEKIAKAVR 460
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 461 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 514
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 515 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKKPYSIILLDEIEKAHHDIFNILLQIMEEGNL 574
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 575 TDTKGRKVNFRDTIIIMTSN 594
>gi|418727492|ref|ZP_13286083.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. UI 12621]
gi|409959307|gb|EKO23081.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. UI 12621]
Length = 771
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 410 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQTEAIEKIAKAVR 460
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 461 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 514
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 515 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKKPYSIILLDEIEKAHHDIFNILLQIMEEGNL 574
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 575 TDTKGRKVNFRDTIIIMTSN 594
>gi|375007935|ref|YP_004981568.1| negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359286784|gb|AEV18468.1| Negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 710
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ + K L ++L +KV Q EA VA + + + G K R GS LF+GP V
Sbjct: 408 EKEKMKHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGS-----FLFVGPTGV 462
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK ++A L+E + G MI L E+ V G ++ G E V+RN
Sbjct: 463 GKTELAKTLAEELFGTKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRN 522
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S+ILL++I++A V+ + +E GRL DS GR +S + + I T++
Sbjct: 523 PYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 572
>gi|266621305|ref|ZP_06114240.1| negative regulator of genetic competence ClpC/MecB [Clostridium
hathewayi DSM 13479]
gi|288867045|gb|EFC99343.1| negative regulator of genetic competence ClpC/MecB [Clostridium
hathewayi DSM 13479]
Length = 816
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 26/208 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++ +L K L L E+V Q+EA +AVA + + ++G +R
Sbjct: 490 PVRKLEEGESQRL---------KNLESILHERVIGQEEAVTAVAKAIRRGRVGLKDPKRP 540
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ AL+E + G +I + E+ V G
Sbjct: 541 IGS-----FLFLGPTGVGKTELSKALAEAMFGTENALIRVDMSEYMEKHSVSKMIGSPPG 595
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+RNP+SVIL ++I++A V + + ++ G + D+ GR+I N
Sbjct: 596 YVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKIDFKNT 655
Query: 772 IFILTADWLPDSL---KFLSQGITLDEK 796
+ I+T++ +S+ K L G DEK
Sbjct: 656 VIIMTSNAGAESIISPKRLGFGAVADEK 683
>gi|172035917|ref|YP_001802418.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp. ATCC
51142]
gi|354556035|ref|ZP_08975333.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
gi|171697371|gb|ACB50352.1| ATP-dependent Clp protease, regulatory subunit [Cyanothece sp. ATCC
51142]
gi|353552034|gb|EHC21432.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
Length = 789
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 25/189 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG--NGKRR 658
P NKL E++++ S L +L E++ Q+EA AV+ + + ++G N KR
Sbjct: 455 PVNKLTETESE---------SLMYLEDNLHERIIGQEEAVKAVSKAIRRSRIGLQNPKRP 505
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTAL 718
A +F GP VGK ++ AL++ + G+ MI L E V TA
Sbjct: 506 IAS------FIFAGPTGVGKTELTKALAQFLFGSKDAMIRLDMSEYMERHTVSKLIGTAP 559
Query: 719 DKIG--------EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
IG EAV+R P+SV+L ++I++A V + + +E GRL DS GR + N
Sbjct: 560 GFIGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFRN 619
Query: 771 VIFILTADW 779
+ I+T++
Sbjct: 620 TLIIMTSNL 628
>gi|418697467|ref|ZP_13258459.1| negative regulator of genetic competence ClpC/MecB [Leptospira
kirschneri str. H1]
gi|409954738|gb|EKO13687.1| negative regulator of genetic competence ClpC/MecB [Leptospira
kirschneri str. H1]
Length = 771
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 410 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQTEAIEKIAKAVR 460
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 461 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 514
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 515 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 574
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 575 TDTKGRKVNFRDTIIIMTSN 594
>gi|418714070|ref|ZP_13274632.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. UI 08452]
gi|410789590|gb|EKR83291.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. UI 08452]
gi|455788553|gb|EMF40521.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Lora str. TE 1992]
Length = 846
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 485 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQTEAIEKIAKAVR 535
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 536 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 589
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 590 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKKPYSIILLDEIEKAHHDIFNILLQIMEEGNL 649
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 650 TDTKGRKVNFRDTIIIMTSN 669
>gi|291534335|emb|CBL07447.1| ATPases with chaperone activity, ATP-binding subunit [Roseburia
intestinalis M50/1]
Length = 815
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 99/188 (52%), Gaps = 17/188 (9%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
++L +L ++V Q++A SAVA V + ++G RR GS LF+GP VGK +
Sbjct: 506 LRKLEATLHKRVIGQEDAVSAVAKAVRRGRVGLKDPRRPIGS-----FLFLGPTGVGKTE 560
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ AL+E V G+ MI + E+ V G ++ E V+RNP+SV
Sbjct: 561 ISKALAEAVFGSEQSMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSEKVRRNPYSV 620
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL---KFLSQ 789
IL ++I++A V + + ++ G + DS GR++ N I I+T++ ++ K L
Sbjct: 621 ILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFKNTIIIMTSNAGAQAIIEPKKLGF 680
Query: 790 GITLDEKK 797
++ DEK+
Sbjct: 681 AVSDDEKQ 688
>gi|421087689|ref|ZP_15548525.1| negative regulator of genetic competence ClpC/MecB [Leptospira
santarosai str. HAI1594]
gi|410429938|gb|EKP74313.1| negative regulator of genetic competence ClpC/MecB [Leptospira
santarosai str. HAI1594]
Length = 771
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 410 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQAEAIEKIAKAVR 460
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 461 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 514
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 515 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 574
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 575 TDTKGRKVNFRDTIIIMTSN 594
>gi|417768360|ref|ZP_12416290.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Pomona str. Pomona]
gi|418703306|ref|ZP_13264193.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|421114495|ref|ZP_15574913.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|409949577|gb|EKN99551.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Pomona str. Pomona]
gi|410014066|gb|EKO72139.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410767025|gb|EKR37705.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|455666322|gb|EMF31758.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Pomona str. Fox 32256]
Length = 846
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 485 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQTEAIEKIAKAVR 535
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 536 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 589
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 590 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKKPYSIILLDEIEKAHHDIFNILLQIMEEGNL 649
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 650 TDTKGRKVNFRDTIIIMTSN 669
>gi|225377785|ref|ZP_03755006.1| hypothetical protein ROSEINA2194_03436 [Roseburia inulinivorans DSM
16841]
gi|225210369|gb|EEG92723.1| hypothetical protein ROSEINA2194_03436 [Roseburia inulinivorans DSM
16841]
Length = 818
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K+L +L ++V Q+EA +AVA V + ++G RR GS LF+GP VGK +
Sbjct: 507 LKKLEATLHKRVVGQEEAVTAVAKAVRRGRVGLKDPRRPIGS-----FLFLGPTGVGKTE 561
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ AL+E V G MI + E+ V G ++ E V+RNP+SV
Sbjct: 562 ISKALAEAVFGNEQAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEDGGQLSEKVRRNPYSV 621
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
IL ++I++A V + + ++ G + DS GR + N I I+T++
Sbjct: 622 ILFDEIEKAHPDVFNILLQVLDDGHITDSQGRRVDFKNTIIIMTSN 667
>gi|398340948|ref|ZP_10525651.1| hemolysin B [Leptospira kirschneri serovar Bim str. 1051]
gi|418677625|ref|ZP_13238899.1| negative regulator of genetic competence ClpC/MecB [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|421089577|ref|ZP_15550383.1| negative regulator of genetic competence ClpC/MecB [Leptospira
kirschneri str. 200802841]
gi|421129447|ref|ZP_15589647.1| negative regulator of genetic competence ClpC/MecB [Leptospira
kirschneri str. 2008720114]
gi|400320815|gb|EJO68675.1| negative regulator of genetic competence ClpC/MecB [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|410001665|gb|EKO52259.1| negative regulator of genetic competence ClpC/MecB [Leptospira
kirschneri str. 200802841]
gi|410358822|gb|EKP05931.1| negative regulator of genetic competence ClpC/MecB [Leptospira
kirschneri str. 2008720114]
Length = 846
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 485 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQTEAIEKIAKAVR 535
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 536 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 589
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 590 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 649
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 650 TDTKGRKVNFRDTIIIMTSN 669
>gi|418742778|ref|ZP_13299147.1| negative regulator of genetic competence ClpC/MecB [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
gi|410749521|gb|EKR06505.1| negative regulator of genetic competence ClpC/MecB [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
Length = 846
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 485 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQTEAIEKIAKAVR 535
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 536 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 589
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 590 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 649
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 650 TDTKGRKVNFRDTIIIMTSN 669
>gi|418685124|ref|ZP_13246306.1| negative regulator of genetic competence ClpC/MecB [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|410740532|gb|EKQ85248.1| negative regulator of genetic competence ClpC/MecB [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
Length = 846
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 485 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQTEAIEKIAKAVR 535
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 536 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 589
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 590 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 649
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 650 TDTKGRKVNFRDTIIIMTSN 669
>gi|291459189|ref|ZP_06598579.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 078 str. F0262]
gi|291418443|gb|EFE92162.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 078 str. F0262]
Length = 828
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 103/193 (53%), Gaps = 23/193 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E+++++L K+L ++L ++V Q EA AVA + + ++G RR
Sbjct: 491 PVEKLAEAESEKL---------KKLEQNLHQRVVGQSEAVHAVAQAIKRGRVGLKDPRRP 541
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS +F+GP VGK +++ AL+EL+ G+ +I + E+ V G
Sbjct: 542 IGS-----FMFLGPTGVGKTELSKALAELMFGSENDLIRVDMSEYMEKYSVSKMIGSPPG 596
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+R P+SV+L ++I++A V + + ++ G + D+ GR+IS N
Sbjct: 597 YVGYDEGGQLSEKVRRRPYSVVLFDEIEKAHPDVLNILLQVLDDGHITDAQGRKISFKNT 656
Query: 772 IFILTADWLPDSL 784
I I+T++ +S+
Sbjct: 657 IIIMTSNAGAESI 669
>gi|421106043|ref|ZP_15566619.1| negative regulator of genetic competence ClpC/MecB [Leptospira
kirschneri str. H2]
gi|410008765|gb|EKO62425.1| negative regulator of genetic competence ClpC/MecB [Leptospira
kirschneri str. H2]
Length = 846
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 485 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQTEAIEKIAKAVR 535
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 536 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 589
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 590 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 649
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 650 TDTKGRKVNFRDTIIIMTSN 669
>gi|418668247|ref|ZP_13229649.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|410755756|gb|EKR17384.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
Length = 844
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 483 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQAEAIEKIAKAVR 533
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 534 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 587
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 588 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 647
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 648 TDTKGRKVNFRDTIIIMTSN 667
>gi|45656243|ref|YP_000329.1| hemolysin B [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|421104061|ref|ZP_15564656.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|45599477|gb|AAS68966.1| hemolysin B [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|410365513|gb|EKP20906.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
Length = 846
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 485 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQAEAIEKIAKAVR 535
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 536 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 589
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 590 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 649
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 650 TDTKGRKVNFRDTIIIMTSN 669
>gi|417784697|ref|ZP_12432402.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. C10069]
gi|409951486|gb|EKO06000.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. C10069]
Length = 846
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 485 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQTEAIEKIAKAVR 535
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 536 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 589
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 590 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 649
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 650 TDTKGRKVNFRDTIIIMTSN 669
>gi|288920262|ref|ZP_06414576.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
gi|288348366|gb|EFC82629.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
Length = 881
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 27/197 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P ++L ES+ ++L RL L E+V Q EA VA V + + G +RR
Sbjct: 555 PVSRLVESEREKLL---------RLDDILHERVVGQDEAVGLVADAVIRARAGIRDQRRP 605
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL E + + MI + E V
Sbjct: 606 VGS-----FLFLGPTGVGKTELARALCEALFDSEDAMIRIDMSEYQERHTVSRLIGSPPG 660
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P+SV+LL++I++A V + + ++ GRL D GR +S +
Sbjct: 661 YVGHEEGGQLTEAVRRKPYSVVLLDEIEKAHTDVFNTLLQVLDDGRLTDGRGRTVSFSDT 720
Query: 772 IFILTAD----WLPDSL 784
+ I+T++ WL D +
Sbjct: 721 VIIMTSNIGSQWLLDGV 737
>gi|386072811|ref|YP_005987128.1| ATP-dependent protease ClpA [Leptospira interrogans serovar Lai
str. IPAV]
gi|353456600|gb|AER01145.1| ATP-dependent protease ClpA [Leptospira interrogans serovar Lai
str. IPAV]
Length = 846
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 485 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQAEAIEKIAKAVR 535
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 536 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 589
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 590 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 649
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 650 TDTKGRKVNFRDTIIIMTSN 669
>gi|24213091|ref|NP_710572.1| ATP-dependent protease ClpA [Leptospira interrogans serovar Lai
str. 56601]
gi|417762519|ref|ZP_12410509.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. 2002000624]
gi|417767072|ref|ZP_12415019.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|417774672|ref|ZP_12422536.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. 2002000621]
gi|418673407|ref|ZP_13234728.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. 2002000623]
gi|418691080|ref|ZP_13252185.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. FPW2026]
gi|418698452|ref|ZP_13259429.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Bataviae str. L1111]
gi|418709461|ref|ZP_13270252.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|421122977|ref|ZP_15583259.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. Brem 329]
gi|421124327|ref|ZP_15584584.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|421134799|ref|ZP_15594930.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|24193790|gb|AAN47590.1| ATP-dependent protease ClpA [Leptospira interrogans serovar Lai
str. 56601]
gi|400350438|gb|EJP02700.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|400359653|gb|EJP15636.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. FPW2026]
gi|409941741|gb|EKN87368.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. 2002000624]
gi|410021025|gb|EKO87819.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410343721|gb|EKO94916.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. Brem 329]
gi|410437458|gb|EKP86557.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|410575514|gb|EKQ38532.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. 2002000621]
gi|410579693|gb|EKQ47533.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. 2002000623]
gi|410762595|gb|EKR28756.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Bataviae str. L1111]
gi|410770407|gb|EKR45629.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
Length = 846
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 485 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQAEAIEKIAKAVR 535
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 536 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 589
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 590 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 649
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 650 TDTKGRKVNFRDTIIIMTSN 669
>gi|418732122|ref|ZP_13290198.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. UI 12758]
gi|410773522|gb|EKR53549.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. UI 12758]
Length = 846
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 485 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQTEAIEKIAKAVR 535
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 536 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 589
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 590 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 649
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 650 TDTKGRKVNFRDTIIIMTSN 669
>gi|381209029|ref|ZP_09916100.1| ATP-dependent Clp proteinase [Lentibacillus sp. Grbi]
Length = 709
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ + + L K+L EKV Q EA VA V + + G K R GS LF+GP V
Sbjct: 407 EQEKMRDLGKNLGEKVIGQDEAVQKVAKAVRRSRAGLKSKYRPIGS-----FLFVGPTGV 461
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++ AL+E + G+ +I L E+ G ++ E V+RN
Sbjct: 462 GKTELTKALAEELFGSRDSLIRLDMSEYMEKHATSKIIGSPPGYVGHEEAGQLTEKVRRN 521
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S++LL++I++A V+ + ME G+L DS+GR +S + + I+T++
Sbjct: 522 PYSILLLDEIEKAHPDVQNMFLQIMEDGQLTDSHGRTVSFKDTVIIMTSN 571
>gi|160881583|ref|YP_001560551.1| ATPase [Clostridium phytofermentans ISDg]
gi|160430249|gb|ABX43812.1| ATPase AAA-2 domain protein [Clostridium phytofermentans ISDg]
Length = 824
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 32/211 (15%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++++L K L L E+V Q EA SAVA + + ++G R
Sbjct: 493 PVRKLEEEESERLMK---------LEGILHERVVGQSEAVSAVAKAIRRGRVGLKDPNRP 543
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ AL+E + G+ MI + E+ V G
Sbjct: 544 IGS-----FLFLGPTGVGKTELSKALAEAMFGSENSMIRVDMSEYMEKHSVSKMIGSPPG 598
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+RNP+SVIL ++I++A V + + ++ G + D+ GR++S N
Sbjct: 599 YVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKVSFKNT 658
Query: 772 IFILTAD------WLPDSLKFLSQGITLDEK 796
I I+T++ P L F S +DEK
Sbjct: 659 IIIMTSNAGAQSIISPKKLGFTS---VVDEK 686
>gi|456823801|gb|EMF72238.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Canicola str. LT1962]
gi|456972808|gb|EMG13121.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Grippotyphosa str. LT2186]
Length = 674
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 313 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQAEAIEKIAKAVR 363
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 364 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 417
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 418 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 477
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 478 TDTKGRKVNFRDTIIIMTSN 497
>gi|138894526|ref|YP_001124979.1| ATP-dependent Clp protease-like protein [Geobacillus
thermodenitrificans NG80-2]
gi|196247869|ref|ZP_03146571.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
gi|134266039|gb|ABO66234.1| ATP-dependent Clp protease-like (class III stress gene)
[Geobacillus thermodenitrificans NG80-2]
gi|196212653|gb|EDY07410.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
Length = 711
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ + K L +L +KV Q EA VA + + + G K R GS LF+GP V
Sbjct: 408 EKEKMKHLEDNLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPVGS-----FLFVGPTGV 462
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK ++A L+E + G MI L E+ V G ++ G E V+RN
Sbjct: 463 GKTELAKTLAEELFGTKDSMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRN 522
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S+ILL++I++A V+ + +E GRL DS GR +S + + I T++
Sbjct: 523 PYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 572
>gi|456987537|gb|EMG22821.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Copenhageni str. LT2050]
Length = 674
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL + L ++V Q EA +A V
Sbjct: 313 DILSVISLWTGIPLEKMEESESDKLL---------RLEEELKKRVVGQAEAIEKIAKAVR 363
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 364 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 417
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 418 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 477
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 478 TDTKGRKVNFRDTIIIMTSN 497
>gi|56419503|ref|YP_146821.1| ATP-dependent Clp protease [Geobacillus kaustophilus HTA426]
gi|56379345|dbj|BAD75253.1| ATP-dependent Clp protease [Geobacillus kaustophilus HTA426]
Length = 645
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ + K L ++L +KV Q EA VA + + + G K R GS LF+GP V
Sbjct: 409 EKEKMKHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGS-----FLFVGPTGV 463
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK ++A L+E + G MI L E+ V G ++ G E V+RN
Sbjct: 464 GKTELAKTLAEELFGTKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRN 523
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+++ILL++I++A V+ + +E GRL DS GR +S + + I T++
Sbjct: 524 PYTIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 573
>gi|410451385|ref|ZP_11305400.1| negative regulator of genetic competence ClpC/MecB [Leptospira sp.
Fiocruz LV3954]
gi|410014886|gb|EKO77003.1| negative regulator of genetic competence ClpC/MecB [Leptospira sp.
Fiocruz LV3954]
Length = 848
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L +S + P K+ ES++D+L RL L ++V Q+EA +A V
Sbjct: 489 DILSVVSLWTGIPLEKMEESESDKLL---------RLEDELKKRVVGQEEAIEKIAKAVR 539
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 540 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 593
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 594 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 653
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 654 TDTKGRKVNFRDTIIIMTSN 673
>gi|331086971|ref|ZP_08336046.1| hypothetical protein HMPREF0987_02349 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409421|gb|EGG88864.1| hypothetical protein HMPREF0987_02349 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 814
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL ES++ +L+K L ++L ++V Q+EA +AVA V + ++G R
Sbjct: 489 PVQKLGESESARLRK---------LEQTLQKRVIGQEEAVTAVAKAVKRGRVGLKSPNRP 539
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ AL+E + G MI + E+ V
Sbjct: 540 IGS-----FLFLGPTGVGKTELSKALAEALFGQEDAMIRVDMSEYMEKHSVSKMIGSPPG 594
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP++VIL ++I++A V + + ++ G + DS GR+I N
Sbjct: 595 YVGHEEGGQLSEKVRRNPYAVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKIDFRNT 654
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 655 VIIMTSN 661
>gi|423681849|ref|ZP_17656688.1| ATP-dependent Clp protease-like (class III stress gene) ClpE
[Bacillus licheniformis WX-02]
gi|383438623|gb|EID46398.1| ATP-dependent Clp protease-like (class III stress gene) ClpE
[Bacillus licheniformis WX-02]
Length = 698
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D K L +L +V Q+EA VA V + + G K R GS LF+GP V
Sbjct: 394 DQKKMKELEANLSSRVIGQKEAVKKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGV 448
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK +++ L+E + G +I L E+ V G ++ E V+RN
Sbjct: 449 GKTELSKRLAEELFGTKDAIIRLDMSEYMEKHAVSKLIGSPPGYVGHEEAGQLTEKVRRN 508
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S++LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 509 PYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 558
>gi|222150851|ref|YP_002560004.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Macrococcus
caseolyticus JCSC5402]
gi|222119973|dbj|BAH17308.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Macrococcus
caseolyticus JCSC5402]
Length = 917
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 26/198 (13%)
Query: 593 LGCISSE---PPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQ 649
+G I S+ P NKL ES+ D+L RL L E+V Q EA V+ V +
Sbjct: 596 IGYIVSQWTGIPVNKLVESEKDKLL---------RLSDILHERVVGQDEAVDLVSDAVIR 646
Query: 650 CKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEP 708
+ G R GS LF+GP VGK ++A AL+ + + M+ + E+
Sbjct: 647 ARAGIKDPNRPIGS-----FLFLGPTGVGKTELAKALASTLFDSEKHMVRIDMSEYMEKH 701
Query: 709 EVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVD 760
V G ++ EAV+RNP++V+LL++I++A V + + ++ GRL D
Sbjct: 702 SVSRLIGAPPGYVGHEEGGQLTEAVRRNPYTVLLLDEIEKAHSDVFNVLLQLLDEGRLTD 761
Query: 761 SYGREISLGNVIFILTAD 778
S GR + N I I+T++
Sbjct: 762 SRGRNVDFKNTIVIMTSN 779
>gi|373106264|ref|ZP_09520567.1| hypothetical protein HMPREF9623_00231 [Stomatobaculum longum]
gi|371652639|gb|EHO18047.1| hypothetical protein HMPREF9623_00231 [Stomatobaculum longum]
Length = 839
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E +N++L K+L L E+V Q EA SAV+ + + ++G R
Sbjct: 496 PVKKLTEEENERL---------KKLESVLHERVIGQDEAVSAVSRAIRRGRVGLKDPHRP 546
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ AL+E + G +I + E+ V
Sbjct: 547 IGS-----FLFLGPTGVGKTELSKALAEAMFGTEQALIRVDMSEYMEKHSVSKIVGSPPG 601
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+SVIL ++I++A V + + ++ G + DS GR+I N
Sbjct: 602 YVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKIDFKNT 661
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 662 VLIMTSN 668
>gi|325663437|ref|ZP_08151847.1| hypothetical protein HMPREF0490_02588 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470336|gb|EGC73567.1| hypothetical protein HMPREF0490_02588 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 814
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL ES++ +L+K L ++L ++V Q+EA +AVA V + ++G R
Sbjct: 489 PVQKLGESESARLRK---------LEQTLQKRVIGQEEAVTAVAKAVKRGRVGLKSPNRP 539
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ AL+E + G MI + E+ V
Sbjct: 540 IGS-----FLFLGPTGVGKTELSKALAEALFGQEDAMIRVDMSEYMEKHSVSKMIGSPPG 594
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP++VIL ++I++A V + + ++ G + DS GR+I N
Sbjct: 595 YVGHEEGGQLSEKVRRNPYAVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKIDFRNT 654
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 655 VIIMTSN 661
>gi|347548400|ref|YP_004854728.1| putative ATP-dependent protease [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346981471|emb|CBW85427.1| Putative ATP-dependent protease [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 721
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 416 MKHLESNLSGKVIGQEDAVKKVAKAIRRSRVGLKAKHRPIGS-----FLFVGPTGVGKTE 470
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ +L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 471 LGRSLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 530
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 531 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 576
>gi|167761662|ref|ZP_02433789.1| hypothetical protein CLOSCI_04074 [Clostridium scindens ATCC 35704]
gi|167660805|gb|EDS04935.1| ATPase family associated with various cellular activities (AAA)
[Clostridium scindens ATCC 35704]
Length = 812
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 105/200 (52%), Gaps = 25/200 (12%)
Query: 590 KDFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTV 647
+D G +S ++ P KL ES++ +L K L ++L ++V Q+EA SAVA +
Sbjct: 475 EDIAGVVSQWTKIPVQKLAESESARLNK---------LEQTLHKRVVGQEEAVSAVAKAI 525
Query: 648 TQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
+ ++G +R GS LF+GP VGK +++ AL+E + G MI + E
Sbjct: 526 KRGRVGLKDPKRPIGS-----FLFLGPTGVGKTELSKALAEALFGNEDAMIRVDMSEYME 580
Query: 707 EPEVRVR-----GKTALD---KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
+ V G D ++ E V+R+P+SVIL ++I++A V + + ++ G +
Sbjct: 581 KHSVAKMIGSPPGYVGHDDGGQLSEQVRRHPYSVILFDEIEKAHPDVFNILLQVLDDGHI 640
Query: 759 VDSYGREISLGNVIFILTAD 778
DS GR++ N + I+T++
Sbjct: 641 TDSQGRKVDFRNTVIIMTSN 660
>gi|336421968|ref|ZP_08602122.1| hypothetical protein HMPREF0993_01499 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336009258|gb|EGN39252.1| hypothetical protein HMPREF0993_01499 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 812
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 105/200 (52%), Gaps = 25/200 (12%)
Query: 590 KDFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTV 647
+D G +S ++ P KL ES++ +L K L ++L ++V Q+EA SAVA +
Sbjct: 475 EDIAGVVSQWTKIPVQKLAESESARLNK---------LEQTLHKRVVGQEEAVSAVAKAI 525
Query: 648 TQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
+ ++G +R GS LF+GP VGK +++ AL+E + G MI + E
Sbjct: 526 KRGRVGLKDPKRPIGS-----FLFLGPTGVGKTELSKALAEALFGNEDAMIRVDMSEYME 580
Query: 707 EPEVRVR-----GKTALD---KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
+ V G D ++ E V+R+P+SVIL ++I++A V + + ++ G +
Sbjct: 581 KHSVAKMIGSPPGYVGHDDGGQLSEQVRRHPYSVILFDEIEKAHPDVFNILLQVLDDGHI 640
Query: 759 VDSYGREISLGNVIFILTAD 778
DS GR++ N + I+T++
Sbjct: 641 TDSQGRKVDFRNTVIIMTSN 660
>gi|311029019|ref|ZP_07707109.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus sp. m3-13]
Length = 812
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 27/209 (12%)
Query: 589 VKDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
V+D +SS P +KL +++ D+L L+ +S L +V Q EA AV+
Sbjct: 475 VEDIAMVVSSWTGIPVSKLAQTETDKL---LNMESL------LHSRVIGQDEAVKAVSKA 525
Query: 647 VTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDH 705
V + + G +R GS +F+GP VGK ++A AL+E + G MI + ++
Sbjct: 526 VRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAESIFGDEDAMIRI-DMSEY 579
Query: 706 EEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERG 756
E R G D+ G E V+R P+SVILL++I++A V + + +E G
Sbjct: 580 MEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDG 639
Query: 757 RLVDSYGREISLGNVIFILTADWLPDSLK 785
RL DS GR + N + I+T++ D+LK
Sbjct: 640 RLTDSKGRTVDFRNTLVIMTSNVGADALK 668
>gi|410938609|ref|ZP_11370453.1| negative regulator of genetic competence ClpC/MecB [Leptospira
noguchii str. 2006001870]
gi|410786277|gb|EKR75224.1| negative regulator of genetic competence ClpC/MecB [Leptospira
noguchii str. 2006001870]
Length = 788
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL L ++V Q EA +A V
Sbjct: 427 DILSVISLWTGIPLEKMEESESDKLL---------RLEDELKKRVVGQTEAIEKIAKAVR 477
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 478 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 531
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 532 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 591
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 592 TDTKGRKVNFRDTIIIMTSN 611
>gi|359687498|ref|ZP_09257499.1| ATP-dependent protease ClpA [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418750586|ref|ZP_13306872.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae str. MMD4847]
gi|418755991|ref|ZP_13312179.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae serovar Varillal str. VAR 010]
gi|384115662|gb|EIE01919.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae serovar Varillal str. VAR 010]
gi|404273189|gb|EJZ40509.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae str. MMD4847]
Length = 846
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 25/248 (10%)
Query: 543 QLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQ 602
Q ++V SQ E+A VR D V + +VLE ++ E + DF I +
Sbjct: 436 QKKEDLVRSQEYEKAAG-----VR-DEVNRKKQVLEEKI-RSWQEKLDDFAVSIDEDDIL 488
Query: 603 NKLHESQNDQLQKPLDPDSFK--RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
+ + + LQ+ + +S + RL + L ++V Q EA +A +V + + G +RR
Sbjct: 489 SVVSQWTGIPLQRMEENESSRLLRLEEELKQRVVGQDEAIEKIAKSVRRARTGFKAERRP 548
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A AL+E + G M+ + ++ EP R
Sbjct: 549 TGS-----FIFLGPTGVGKTELAKALAEFLFGDQDAMLRVD-MSEYMEPHAVSRLIGAPP 602
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D G E V++ P+S+ILL++I++A + + + ME G L D+ GR+++ +
Sbjct: 603 GYVGYDDGGQLTEFVRKKPYSIILLDEIEKAHHDIFNVLLQVMEEGNLTDTKGRKVNFRD 662
Query: 771 VIFILTAD 778
I I+T++
Sbjct: 663 AIIIMTSN 670
>gi|335045358|ref|ZP_08538381.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 108 str. F0425]
gi|333759144|gb|EGL36701.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 108 str. F0425]
Length = 818
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL ES++++L K L L +V Q EA AVA + + ++G +R
Sbjct: 490 PAKKLSESESEKL---------KNLENLLHTRVIGQNEAVHAVAQAIKRGRVGLKDPKRP 540
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS +F+GP VGK +++ AL+E V G+ +I + E+ V G
Sbjct: 541 IGS-----FMFLGPTGVGKTELSKALAETVFGSEQNLIRVDMSEYMEKYSVSKMIGSPPG 595
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+RNP+SVIL ++I++A V + + ++ G + DS GR++S N
Sbjct: 596 YVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVLNILLQVLDDGHITDSQGRKVSFKNT 655
Query: 772 IFILTAD 778
I I+T++
Sbjct: 656 IIIMTSN 662
>gi|123967762|ref|YP_001008620.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. AS9601]
gi|123197872|gb|ABM69513.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
ClpB [Prochlorococcus marinus str. AS9601]
Length = 920
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L EKV Q++A V+ + + ++G +R GS LFMGP VGK ++A +L+
Sbjct: 616 LSEKVIGQEKAIEVVSAAIRRARVGMKSPKRPIGS-----FLFMGPTGVGKTELAKSLAT 670
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
++ ++ L E+ V G ++ EAV+R P+SVILL++I+
Sbjct: 671 VLFDEEDALLRLDMSEYMEKNAVARLLGAPPGYIGYEEGGQLTEAVRRKPYSVILLDEIE 730
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKL 798
+A V + + ++ GRL DS GR + N + I+T++ S+ SQ I+ E KL
Sbjct: 731 KAHAEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSNLAGKSILEYSQKISKSEGKL 789
>gi|258405978|ref|YP_003198720.1| ATP-dependent chaperone ClpB [Desulfohalobium retbaense DSM 5692]
gi|257798205|gb|ACV69142.1| ATP-dependent chaperone ClpB [Desulfohalobium retbaense DSM 5692]
Length = 866
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 22/201 (10%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
RL L E+V Q EA AVA V + + G RR GS +F+GP VGK ++
Sbjct: 569 RLGDVLHERVVGQDEAVEAVADAVLRARAGLKDPRRPIGS-----FIFLGPTGVGKTELC 623
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVI 733
L+E + + MI L ++ E R G ++ G EAV+R P+SVI
Sbjct: 624 KTLAESLFDSEENMIRL-DMSEYMEKHTTARLIGAPPGYVGYEEGGQLTEAVRRKPYSVI 682
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITL 793
L ++I++A V + + ++ GRL DS+GR + N I I+T++ +F+ +GI+
Sbjct: 683 LFDEIEKAHADVFNTLLQILDDGRLTDSHGRTVDFKNTIIIMTSNL---GSEFMLEGIS- 738
Query: 794 DEKKLTSLASGEWQLRLSIRG 814
E +LT A Q+ ++RG
Sbjct: 739 GEGELTDTARS--QVMNTLRG 757
>gi|160895376|ref|ZP_02076146.1| hypothetical protein CLOL250_02934 [Clostridium sp. L2-50]
gi|156862947|gb|EDO56378.1| ATPase family associated with various cellular activities (AAA)
[Clostridium sp. L2-50]
Length = 817
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E ++ +L+ RL + L ++V Q EA AVA + + ++G +R
Sbjct: 491 PVNKLTEQESKRLE---------RLEEELHKRVVGQNEAVDAVAKAIKRSRVGLKDPKRP 541
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ AL+E V G+ +I + E+ V G
Sbjct: 542 VGS-----FLFLGPTGVGKTELSKALAEAVFGSEDALIRVDMSEYMEKHSVSKLIGSPPG 596
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
++ G E V+ NP+SVIL ++I++A V + + ++ G + DS GR++ N
Sbjct: 597 YVGFEEGGQLSEKVRSNPYSVILFDEIEKAHSDVFNILLQVLDDGHITDSQGRKVDFKNT 656
Query: 772 IFILTAD 778
I I+T++
Sbjct: 657 IIIMTSN 663
>gi|339624365|ref|ZP_08660154.1| ATP-dependent Clp protease ATP-binding subunit [Fructobacillus
fructosus KCTC 3544]
Length = 827
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 27/202 (13%)
Query: 590 KDFLGCISSEP--PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTV 647
+D IS + P N++ ES++DQL L K L ++V Q+ A SAV+ +
Sbjct: 484 EDIATVISQQTGVPLNQVQESESDQLVN---------LEKELGKRVIGQKAAVSAVSRAI 534
Query: 648 TQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
+ + G +R G+ LF+GP VGK ++A AL+ELV G+ MI + +++
Sbjct: 535 RRARSGLADPKRPMGT-----FLFLGPTGVGKTELAKALAELVFGSEDNMIRI-DMSEYQ 588
Query: 707 EPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGR 757
E R G D+ G E V+++P+S+ILL+++++A+ + + + + G
Sbjct: 589 EQYSASRLIGAAPGYVGYDQGGQLTEQVRKHPYSIILLDELEKANKDIYNLMLQVFDDGF 648
Query: 758 LVDSYGREISLGNVIFILTADW 779
L D+ GR ++ N I I+T++
Sbjct: 649 LTDAKGRRVNFRNTIIIMTSNL 670
>gi|398304778|ref|ZP_10508364.1| ATP-dependent Clp protease [Bacillus vallismortis DV1-F-3]
Length = 699
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L E+V Q+ A VA V + + G K R GS LF+GP VGK +
Sbjct: 400 MKELEAKLHERVIGQEAAVRKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGVGKTE 454
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L++ + G MI L E+ V G ++ E V+RNP+S+
Sbjct: 455 LSKTLADELFGTKDAMIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSI 514
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 515 VLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 560
>gi|363897398|ref|ZP_09323937.1| hypothetical protein HMPREF9624_00499 [Oribacterium sp. ACB7]
gi|361958895|gb|EHL12192.1| hypothetical protein HMPREF9624_00499 [Oribacterium sp. ACB7]
Length = 818
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL ES++++L K L L +V Q EA AVA + + ++G +R
Sbjct: 490 PAKKLSESESEKL---------KNLENLLHTRVIGQNEAVHAVAQAIKRGRVGLKDPKRP 540
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS +F+GP VGK +++ AL+E V G+ +I + E+ V G
Sbjct: 541 IGS-----FMFLGPTGVGKTELSKALAETVFGSEQNLIRVDMSEYMEKYSVSKMIGSPPG 595
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+RNP+SVIL ++I++A V + + ++ G + DS GR++S N
Sbjct: 596 YVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVLNILLQVLDDGHITDSQGRKVSFKNT 655
Query: 772 IFILTAD 778
I I+T++
Sbjct: 656 IIIMTSN 662
>gi|325674654|ref|ZP_08154341.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
gi|325554240|gb|EGD23915.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
Length = 810
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + +RL L ++V Q++A A+A V + + G G RR GS LF+GP V
Sbjct: 498 DKERLRRLEDELHQRVVGQEDAVKAIARAVRRSRTGMGDPRRPVGS-----FLFLGPTGV 552
Query: 677 GKKKMASALSELVSGASPIMIPL-----GPRRDHEE----PEVRVRGKTALDKIGEAVKR 727
GK ++A AL++ + G M+ L G R P V G ++ E V+R
Sbjct: 553 GKTELAKALAQSLFGDESKMLRLDMSEFGERHTASRLVGAPPGYV-GYGEAGQLTEQVRR 611
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPD----- 782
+P+SVILL++I++A V + + ++ GRL D GR + N + I+T++ D
Sbjct: 612 HPYSVILLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVLIMTSNLGSDIISSK 671
Query: 783 --SLKFLSQGITLDEKKLTSLASGEWQLRLSIR 813
+L F + EK L G +LR S R
Sbjct: 672 GGALGFTTGDAAATEKPLRDRVMG--RLRESFR 702
>gi|116327125|ref|YP_796845.1| ATP-dependent Clp protease [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116332218|ref|YP_801936.1| ATP-dependent Clp protease [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116119869|gb|ABJ77912.1| ATP-dependent Clp protease [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116125907|gb|ABJ77178.1| ATP-dependent Clp protease [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 847
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L +S + P K+ ES++D+L RL L +++ Q+EA +A V
Sbjct: 488 DILSVVSLWTGIPLEKMEESESDKLL---------RLEDELKKRIVGQEEAIEKIAKAVR 538
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 539 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 592
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 593 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 652
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 653 TDTKGRKVNFRDTIIIMTSN 672
>gi|398331814|ref|ZP_10516519.1| ATP-dependent Clp protease [Leptospira alexanderi serovar Manhao 3
str. L 60]
Length = 849
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L +S + P K+ ES++D+L RL L +++ Q+EA +A V
Sbjct: 488 DILSVVSLWTGIPLEKMEESESDKLL---------RLEDELKKRIVGQEEAIEKIAKAVR 538
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 539 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 592
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 593 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 652
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 653 TDTKGRKVNFRDTIIIMTSN 672
>gi|373454701|ref|ZP_09546565.1| hypothetical protein HMPREF9453_00734 [Dialister succinatiphilus
YIT 11850]
gi|371935564|gb|EHO63309.1| hypothetical protein HMPREF9453_00734 [Dialister succinatiphilus
YIT 11850]
Length = 806
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 14/180 (7%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K D + L L ++V Q EA AVAT + + + G +R GS LF+G
Sbjct: 486 KKSDSERLLHLEDELHKRVIGQDEAVHAVATAIRRARAGMKDPKRPIGS-----FLFLGT 540
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAV 725
VGK ++A AL+E + G+ MI E+ EV G ++ +AV
Sbjct: 541 TGVGKTELARALAECMFGSEKNMIRFDMSEYMEKHEVSRLVGAPPGYVGYEEGGQLTDAV 600
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+RNP+SVIL +++++A M + + ++ GRL D GR + N + I+T++ + LK
Sbjct: 601 RRNPYSVILFDEVEKAHMDFFNILLQVLDDGRLTDGQGRTVDFTNCVIIMTSNLGSNFLK 660
>gi|319646264|ref|ZP_08000494.1| ClpE protein [Bacillus sp. BT1B_CT2]
gi|317392014|gb|EFV72811.1| ClpE protein [Bacillus sp. BT1B_CT2]
Length = 698
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D K L L +V Q+EA VA V + + G K R GS LF+GP V
Sbjct: 394 DQKKMKELEAHLSSRVIGQKEAVKKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGV 448
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK +++ L+E + G +I L E+ V G ++ E V+RN
Sbjct: 449 GKTELSKRLAEELFGTKDAIIRLDMSEYMEKHAVSKLIGSPPGYVGHEEAGQLTEKVRRN 508
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S++LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 509 PYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 558
>gi|16803037|ref|NP_464522.1| ATP-dependent protease [Listeria monocytogenes EGD-e]
gi|47096329|ref|ZP_00233925.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|254911682|ref|ZP_05261694.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes J2818]
gi|254936008|ref|ZP_05267705.1| ATP-dependent protease [Listeria monocytogenes F6900]
gi|386046660|ref|YP_005964992.1| ATP-dependent protease [Listeria monocytogenes J0161]
gi|386049925|ref|YP_005967916.1| ATP-dependent protease [Listeria monocytogenes FSL R2-561]
gi|386053266|ref|YP_005970824.1| ATP-dependent protease [Listeria monocytogenes Finland 1998]
gi|404283441|ref|YP_006684338.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|405757997|ref|YP_006687273.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|16410399|emb|CAC99075.1| ATP-dependent protease [Listeria monocytogenes EGD-e]
gi|47015287|gb|EAL06224.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|258608596|gb|EEW21204.1| ATP-dependent protease [Listeria monocytogenes F6900]
gi|293589631|gb|EFF97965.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes J2818]
gi|345533651|gb|AEO03092.1| ATP-dependent protease [Listeria monocytogenes J0161]
gi|346423771|gb|AEO25296.1| ATP-dependent protease [Listeria monocytogenes FSL R2-561]
gi|346645917|gb|AEO38542.1| ATP-dependent protease [Listeria monocytogenes Finland 1998]
gi|404232943|emb|CBY54346.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404235879|emb|CBY57281.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|441470658|emb|CCQ20413.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Listeria
monocytogenes]
gi|441473791|emb|CCQ23545.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Listeria
monocytogenes N53-1]
Length = 724
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L ++L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 419 MKNLERNLTGKVIGQEDAVKKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 473
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ + G ++ E V+RNP+S+
Sbjct: 474 LGRTLARELFGTSEAMIRLDMSEFMEKHSISKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 533
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 534 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 579
>gi|421094745|ref|ZP_15555458.1| negative regulator of genetic competence ClpC/MecB [Leptospira
borgpetersenii str. 200801926]
gi|410361455|gb|EKP12495.1| negative regulator of genetic competence ClpC/MecB [Leptospira
borgpetersenii str. 200801926]
gi|456887182|gb|EMF98244.1| negative regulator of genetic competence ClpC/MecB [Leptospira
borgpetersenii str. 200701203]
Length = 847
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L +S + P K+ ES++D+L RL L +++ Q+EA +A V
Sbjct: 488 DILSVVSLWTGIPLEKMEESESDKLL---------RLEDELKKRIVGQEEAIEKIAKAVR 538
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 539 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 592
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 593 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 652
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 653 TDTKGRKVNFRDTIIIMTSN 672
>gi|387927239|ref|ZP_10129918.1| ATPase AAA-2 domain protein [Bacillus methanolicus PB1]
gi|387589383|gb|EIJ81703.1| ATPase AAA-2 domain protein [Bacillus methanolicus PB1]
Length = 722
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + +++ K L +L KV Q+EA VA + + + G K R
Sbjct: 412 PIGKLQEDEQEKM---------KNLEANLATKVIGQEEAVKKVAKAIRRSRAGLKSKNRP 462
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++ L+E + G+ MI L E+ +
Sbjct: 463 IGS-----FLFVGPTGVGKTELTKVLAEELFGSKDAMIRLDMSEYMEKHSISKIIGSPPG 517
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+S+ILL++I++A V+ + +E GRL DS GR +S +
Sbjct: 518 YVGHEDAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDS 577
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 578 VIIMTSN 584
>gi|359728798|ref|ZP_09267494.1| ATP-dependent Clp protease [Leptospira weilii str. 2006001855]
gi|417780755|ref|ZP_12428512.1| negative regulator of genetic competence ClpC/MecB [Leptospira
weilii str. 2006001853]
gi|410779058|gb|EKR63679.1| negative regulator of genetic competence ClpC/MecB [Leptospira
weilii str. 2006001853]
Length = 849
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L +S + P K+ ES++D+L RL L +++ Q+EA +A V
Sbjct: 488 DILSVVSLWTGIPLEKMEESESDKLL---------RLEDELKKRIVGQEEAIEKIAKAVR 538
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 539 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 592
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 593 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 652
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 653 TDTKGRKVNFRDTIIIMTSN 672
>gi|320449888|ref|YP_004201984.1| chaperone protein ClpB 1 [Thermus scotoductus SA-01]
gi|320150057|gb|ADW21435.1| chaperone protein ClpB 1 [Thermus scotoductus SA-01]
Length = 742
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 20/206 (9%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR-RGAGSKGDMWLLFMGPDRV 676
D + RL + L ++V Q+EA A+A+ + + ++G G R R A S LF+G V
Sbjct: 440 DDEKLMRLEEELRKRVVGQEEAIRALASALRRARVGLGGRTRVAAS-----FLFVGQSGV 494
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIGEAVKR 727
GK ++A AL+E++ G+ +I + +EP + G ++ EAV+R
Sbjct: 495 GKTQLAKALAEVLFGSERALIRF-DMSEFQEPHSVSKLIGAPPGYVGYEQGGRLTEAVRR 553
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW---LPDSL 784
PFSV+LL++I++A + + ++ GRL D GR + VI I+T++ + ++
Sbjct: 554 QPFSVVLLDEIEKAHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTSNTGYNVGPAI 613
Query: 785 KFLSQGITLDEKKLTSLASGEWQLRL 810
F S+ + E L SL + E+ RL
Sbjct: 614 GFTSKEVD-TESPLKSLFTPEFLDRL 638
>gi|78778595|ref|YP_396707.1| ATPase [Prochlorococcus marinus str. MIT 9312]
gi|78712094|gb|ABB49271.1| ATPase [Prochlorococcus marinus str. MIT 9312]
Length = 918
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L K L EKV Q++A AV+ + + ++G +R GS LFMGP VGK ++A
Sbjct: 610 LEKELSEKVIGQEKAIEAVSAAIRRARVGMKSPKRPIGS-----FLFMGPTGVGKTELAK 664
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
+L+ + ++ L E+ V G ++ EAV+R P+SVILL
Sbjct: 665 SLASSLFDEEEALLRLDMSEYMEKNAVARLLGAPPGYVGYEEGGQLTEAVRRKPYSVILL 724
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDE 795
++I++A V + + ++ GRL DS GR + N + I+T++ + SQ I+ E
Sbjct: 725 DEIEKAHTEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSNLAGKFILEYSQKISKSE 784
Query: 796 KKL 798
KL
Sbjct: 785 GKL 787
>gi|52079919|ref|YP_078710.1| ATP-dependent Clp protease-like (class III stress gene) ClpE
[Bacillus licheniformis DSM 13 = ATCC 14580]
gi|404488801|ref|YP_006712907.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52003130|gb|AAU23072.1| ATP-dependent Clp protease-like (class III stress gene) ClpE
[Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52347792|gb|AAU40426.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
licheniformis DSM 13 = ATCC 14580]
Length = 698
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D K L L +V Q+EA VA V + + G K R GS LF+GP V
Sbjct: 394 DQKKMKELEAHLSSRVIGQKEAVKKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGV 448
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK +++ L+E + G +I L E+ V G ++ E V+RN
Sbjct: 449 GKTELSKRLAEELFGTKDAIIRLDMSEYMEKHAVSKLIGSPPGYVGHEEAGQLTEKVRRN 508
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S++LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 509 PYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 558
>gi|418717998|ref|ZP_13277535.1| negative regulator of genetic competence ClpC/MecB [Leptospira
borgpetersenii str. UI 09149]
gi|418736971|ref|ZP_13293369.1| negative regulator of genetic competence ClpC/MecB [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|410744991|gb|EKQ93723.1| negative regulator of genetic competence ClpC/MecB [Leptospira
borgpetersenii str. UI 09149]
gi|410747130|gb|EKR00036.1| negative regulator of genetic competence ClpC/MecB [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
Length = 847
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L +S + P K+ ES++D+L RL L +++ Q+EA +A V
Sbjct: 488 DILSVVSLWTGIPLEKMEESESDKLL---------RLEDELKKRIVGQEEAIEKIAKAVR 538
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 539 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 592
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 593 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 652
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 653 TDTKGRKVNFRDTIIIMTSN 672
>gi|313679912|ref|YP_004057651.1| ATP-dependent clp protease ATP-binding subunit clpa [Oceanithermus
profundus DSM 14977]
gi|313152627|gb|ADR36478.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Oceanithermus
profundus DSM 14977]
Length = 734
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 85/159 (53%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSEL 688
L EKV Q +A A+A+ + + ++G G R ++ LF+GP VGK ++A AL+E
Sbjct: 445 LREKVVGQDQAVRALASALRRARVGLGGR----ARVTASFLFVGPSGVGKTQLAKALAET 500
Query: 689 VSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIGEAVKRNPFSVILLEDID 739
+ G+ +I + +EP + G ++ EAV+R PFSV+LL++I+
Sbjct: 501 LFGSERALIRF-DMSEFQEPHSISKLIGAPPGYVGYEQGGRLTEAVRRQPFSVVLLDEIE 559
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V G + ++ GRL D GR + VI I+T++
Sbjct: 560 KAHPDVYGAFLQVLDDGRLTDGLGRTVDFRRVILIMTSN 598
>gi|456864091|gb|EMF82516.1| negative regulator of genetic competence ClpC/MecB [Leptospira
weilii serovar Topaz str. LT2116]
Length = 849
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L +S + P K+ ES++D+L RL L +++ Q+EA +A V
Sbjct: 488 DILSVVSLWTGIPLEKMEESESDKLL---------RLEDELKKRIVGQEEAIEKIAKAVR 538
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 539 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 592
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 593 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 652
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 653 TDTKGRKVNFRDTIIIMTSN 672
>gi|210615483|ref|ZP_03290610.1| hypothetical protein CLONEX_02826 [Clostridium nexile DSM 1787]
gi|210150332|gb|EEA81341.1| hypothetical protein CLONEX_02826 [Clostridium nexile DSM 1787]
Length = 814
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 575 KVLESAPEKTHIEPVK--------DFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKR 624
K LES + H K D +SS + P KL E+++ +L K+
Sbjct: 453 KKLESVKRRFHSNNAKRNLVVTEADIESVVSSWTKIPVQKLAETESARL---------KK 503
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L ++L ++V Q+EA SAVA V + ++G +R GS LF+GP VGK +++
Sbjct: 504 LEQTLHKRVIGQEEAVSAVARAVKRGRVGLKDPKRPIGS-----FLFLGPTGVGKTELSK 558
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALD---KIGEAVKRNPFSVILL 735
AL+E + G MI + E+ V G D ++ E V+RNP+SV+L
Sbjct: 559 ALAEALFGDENAMIRVDMSEYMEKHSVSKMIGSPPGYVGHDDGGQLSEKVRRNPYSVVLF 618
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + ++ G + DS GR++ N + I+T++
Sbjct: 619 DEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSN 661
>gi|338813698|ref|ZP_08625791.1| clpc ATPase [Acetonema longum DSM 6540]
gi|337274331|gb|EGO62875.1| clpc ATPase [Acetonema longum DSM 6540]
Length = 811
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++++L K L + L +V Q+EA SAVA V + + G +R
Sbjct: 489 PVKKLAEEESERLLK---------LEQVLHNRVIGQEEAVSAVAKAVRRARSGLKDPKRP 539
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + G MI L E+ V
Sbjct: 540 IGS-----FIFLGPTGVGKTELARALAEAMFGDENAMIRLDMSEYMEKHTVSRLVGSPPG 594
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ +A++R P+SV+L ++I++A V + + +E GRL DS GR + N
Sbjct: 595 YVGYEEGGQLTDAIRRKPYSVVLFDEIEKAHYDVFNILLQILEDGRLTDSKGRTVDFKNA 654
Query: 772 IFILTADWLPDSLK-------FLSQGITLDEKKLTS 800
+ I+T++ LK FL+ DEK S
Sbjct: 655 VIIMTSNVGAKHLKKDAAAVGFLAGSSENDEKAAKS 690
>gi|421097017|ref|ZP_15557714.1| negative regulator of genetic competence ClpC/MecB [Leptospira
borgpetersenii str. 200901122]
gi|410799885|gb|EKS01948.1| negative regulator of genetic competence ClpC/MecB [Leptospira
borgpetersenii str. 200901122]
Length = 847
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L +S + P K+ ES++D+L RL L +++ Q+EA +A V
Sbjct: 488 DILSVVSLWTGIPLEKMEESESDKLL---------RLEDELKKRIVGQEEAIEKIAKAVR 538
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 539 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 592
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 593 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 652
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 653 TDTKGRKVNFRDTIIIMTSN 672
>gi|375099628|ref|ZP_09745891.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora cyanea NA-134]
gi|374660360|gb|EHR60238.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora cyanea NA-134]
Length = 843
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 14/163 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L + L +V Q EA +AVA +V + + G + R +GS LF+GP VGK ++A
Sbjct: 532 LEEHLHGRVVGQDEAVAAVAESVRRARAGLAEPGRPSGS-----FLFLGPTGVGKTELAR 586
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
AL+E + G+ MI L E V G ++ EAV+R P+SV+LL
Sbjct: 587 ALAEALFGSEESMIRLDMSEYGERHTVSRLVGAPPGYVGYEEAGQLTEAVRRRPYSVVLL 646
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + +E GRL D GR ++ N + I+T++
Sbjct: 647 DEIEKAHQDVFNMLLQVLEDGRLTDGRGRTVNFTNTVLIMTSN 689
>gi|347531245|ref|YP_004838008.1| ATPase AAA-2 [Roseburia hominis A2-183]
gi|345501393|gb|AEN96076.1| ATPase AAA-2 [Roseburia hominis A2-183]
Length = 817
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K+L +L ++V Q+EA SAVA V + ++G +R GS LF+GP VGK +
Sbjct: 506 LKKLEATLHKRVIGQEEAVSAVAKAVRRGRVGLKDPKRPIGS-----FLFLGPTGVGKTE 560
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ AL+E V G MI + E+ V G ++ E V+RNP++V
Sbjct: 561 ISKALAEAVFGQEQAMIRIDMSEYMEKHSVSKMIGSPPGYVGHEDGGQLSEKVRRNPYAV 620
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
IL ++I++A V + + ++ G + DS GR++ N I I+T++
Sbjct: 621 ILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFKNTIIIMTSN 666
>gi|448237139|ref|YP_007401197.1| ATP-dependent Clp protease ATP-binding subunit [Geobacillus sp.
GHH01]
gi|445205981|gb|AGE21446.1| ATP-dependent Clp protease ATP-binding subunit [Geobacillus sp.
GHH01]
Length = 710
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ + K L ++L +KV Q EA VA + + + G K R GS LF+GP V
Sbjct: 408 EKEKMKHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGS-----FLFVGPTGV 462
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK ++A L+E + G +I L E+ V G ++ G E V+RN
Sbjct: 463 GKTELAKTLAEELFGTKDALIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRN 522
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S+ILL++I++A V+ + +E GRL DS GR +S + + I T++
Sbjct: 523 PYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 572
>gi|284801329|ref|YP_003413194.1| ATP-dependent protease [Listeria monocytogenes 08-5578]
gi|284994471|ref|YP_003416239.1| ATP-dependent protease [Listeria monocytogenes 08-5923]
gi|404413084|ref|YP_006698671.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|284056891|gb|ADB67832.1| ATP-dependent protease [Listeria monocytogenes 08-5578]
gi|284059938|gb|ADB70877.1| ATP-dependent protease [Listeria monocytogenes 08-5923]
gi|404238783|emb|CBY60184.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC7179]
Length = 724
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L ++L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 419 MKNLERNLTGKVIGQEDAVKKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 473
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G + MI L E+ V G ++ E V+RNP+S+
Sbjct: 474 LGRTLARELFGTTEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 533
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 534 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 579
>gi|386381698|ref|ZP_10067407.1| ATPase AAA [Streptomyces tsukubaensis NRRL18488]
gi|385670840|gb|EIF93874.1| ATPase AAA [Streptomyces tsukubaensis NRRL18488]
Length = 867
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 31/191 (16%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRG 659
P ++L E++ ++L K L SL E+V Q+EA +AV+ V + + G G R
Sbjct: 525 PVSQLTETERERLLK---------LEDSLHERVVGQEEAVTAVSQAVRRGRAGMGDPDRP 575
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+EL+ G + M+ R D E + R
Sbjct: 576 TGS-----FLFLGPTGVGKTELAKALAELLFGDADRMV----RFDMSEFQERHTVSRLVG 626
Query: 712 ----VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREIS 767
G ++ EAV+R P+SV+L +++++A V + + ++ GRL D+ GR +
Sbjct: 627 SPPGYIGYEEAGQLTEAVRRKPYSVVLFDEVEKAHPDVFNLLLQVLDDGRLTDAQGRTVD 686
Query: 768 LGNVIFILTAD 778
+ + I+T++
Sbjct: 687 FRHTVVIMTSN 697
>gi|451979932|ref|ZP_21928334.1| Chaperone protein ClpB [Nitrospina gracilis 3/211]
gi|451762804|emb|CCQ89548.1| Chaperone protein ClpB [Nitrospina gracilis 3/211]
Length = 808
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 28/212 (13%)
Query: 590 KDFLGCISSEP--PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTV 647
+D +SS P N++ E ++ +L + + L K+ Q+EA A+ +
Sbjct: 470 EDIAAVVSSMTGIPLNRIEEKESTRLLN---------MAEELGNKIVGQKEAVEAITKAI 520
Query: 648 TQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
+ + G RR G+ LF+GP VGK ++A AL+E + G +I L E
Sbjct: 521 RRSRSGLKDMRRPIGT-----FLFLGPTGVGKTELAGALAEFLFGQRDALIRLDMSEYME 575
Query: 707 EPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
+ V G ++ E V+R P+SV+L ++I++A+ V + + M+ GRL
Sbjct: 576 KFNVSRLTGAPPGYVGYEEGGQLTEKVRRKPYSVVLFDEIEKANPDVFHLLLQIMDDGRL 635
Query: 759 VDSYGREISLGNVIFILTADWLPDSLKFLSQG 790
DSYGR + N + ILT++ S K L +G
Sbjct: 636 TDSYGRNVDFKNTVIILTSNI---SSKMLDKG 664
>gi|256372657|ref|YP_003110481.1| ATPase AAA-2 domain-containing protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256009241|gb|ACU54808.1| ATPase AAA-2 domain protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 829
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 25/189 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L E + +L R+ L ++ Q+EA SA++ + + + G RR
Sbjct: 494 PVNQLTEEETSKLL---------RMEDELHHRIVGQEEAISALSRAIRRTRAGLKDPRRP 544
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
+GS +F+GP VGK ++A L+E + G +I L ++ E R
Sbjct: 545 SGS-----FIFLGPTGVGKTELAKTLAEFLFGDQDALIQL-DMSEYMEKHTVARLVGAPP 598
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R PFSV+L ++I++A + + + +E GRL D+ GR + N
Sbjct: 599 GYVGYDEGGQLTEAVRRRPFSVVLFDEIEKAHPDIFNTLLQILEDGRLTDAQGRTVDFKN 658
Query: 771 VIFILTADW 779
I I+T++
Sbjct: 659 TILIMTSNL 667
>gi|240144490|ref|ZP_04743091.1| negative regulator of genetic competence ClpC/mecB [Roseburia
intestinalis L1-82]
gi|257203477|gb|EEV01762.1| negative regulator of genetic competence ClpC/mecB [Roseburia
intestinalis L1-82]
Length = 815
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 99/188 (52%), Gaps = 17/188 (9%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
++L +L ++V Q++A SAVA V + ++G +R GS LF+GP VGK +
Sbjct: 506 LRKLEATLHKRVIGQEDAVSAVAKAVRRGRVGLKDPKRPIGS-----FLFLGPTGVGKTE 560
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ AL+E V G+ MI + E+ V G ++ E V+RNP+SV
Sbjct: 561 ISKALAEAVFGSEQSMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSEKVRRNPYSV 620
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL---KFLSQ 789
IL ++I++A V + + ++ G + DS GR++ N I I+T++ ++ K L
Sbjct: 621 ILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFKNTIIIMTSNAGAQAIIEPKKLGF 680
Query: 790 GITLDEKK 797
++ DEK+
Sbjct: 681 AVSDDEKQ 688
>gi|253577148|ref|ZP_04854468.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251843392|gb|EES71420.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 814
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 25/195 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E + ++L + K L E+V Q+EA AV+ + + + G +R
Sbjct: 487 PVNKLKEEETERLLN---------MEKILHERVIGQEEAVKAVSRAIRRARAGLKDPKRP 537
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A AL+E + G +I + ++ E R
Sbjct: 538 MGS-----FIFLGPTGVGKTELARALAEAMFGDENAVIRI-DMSEYMEKHSTARLVGAPP 591
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ G E V+R P+SV+LL++I++A V + + +E GRL DS GR + N
Sbjct: 592 GYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRN 651
Query: 771 VIFILTADWLPDSLK 785
+ ILT++ D++K
Sbjct: 652 TLIILTSNVGADAIK 666
>gi|126657055|ref|ZP_01728226.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp.
CCY0110]
gi|126621598|gb|EAZ92308.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp.
CCY0110]
Length = 788
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 25/189 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG--NGKRR 658
P NKL E++++ S L +L E++ Q+ A AV+ V + ++G N KR
Sbjct: 454 PVNKLTETESE---------SLMYLEDNLHERIIGQENAVKAVSKAVRRSRIGLQNPKRP 504
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTAL 718
A +F GP VGK ++ AL++ + G+ MI L E V TA
Sbjct: 505 IAS------FIFAGPTGVGKTELTKALAQFLFGSKDAMIRLDMSEYMERHTVSKLIGTAP 558
Query: 719 DKIG--------EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
IG EAV+R P+SV+L ++I++A V + + +E GRL DS GR + N
Sbjct: 559 GFIGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFRN 618
Query: 771 VIFILTADW 779
+ I+T++
Sbjct: 619 TLIIMTSNL 627
>gi|398335426|ref|ZP_10520131.1| ATP-dependent protease ClpA [Leptospira kmetyi serovar Malaysia
str. Bejo-Iso9]
Length = 849
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P K+ ES++D+L RL L ++V Q EA +A V
Sbjct: 488 DILSVISLWTGIPLEKMEESESDKLL---------RLEDELKKRVVGQGEAIEKIAKAVR 538
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 539 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 592
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 593 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 652
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 653 TDTKGRKVNFRDTIIIMTSN 672
>gi|291538077|emb|CBL11188.1| ATPases with chaperone activity, ATP-binding subunit [Roseburia
intestinalis XB6B4]
Length = 815
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 99/188 (52%), Gaps = 17/188 (9%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
++L +L ++V Q++A SAVA V + ++G +R GS LF+GP VGK +
Sbjct: 506 LRKLEATLHKRVIGQEDAVSAVAKAVRRGRVGLKDPKRPIGS-----FLFLGPTGVGKTE 560
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ AL+E V G+ MI + E+ V G ++ E V+RNP+SV
Sbjct: 561 ISKALAEAVFGSEQSMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSEKVRRNPYSV 620
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL---KFLSQ 789
IL ++I++A V + + ++ G + DS GR++ N I I+T++ ++ K L
Sbjct: 621 ILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFKNTIIIMTSNAGAQAIIEPKKLGF 680
Query: 790 GITLDEKK 797
++ DEK+
Sbjct: 681 AVSDDEKQ 688
>gi|116872398|ref|YP_849179.1| ATP-dependent protease clpE [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741276|emb|CAK20398.1| ATP-dependent protease clpE [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 724
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 419 MKNLESNLTGKVIGQEDAVKKVAKAIRRSRVGLKAKNRPIGS-----FLFVGPTGVGKTE 473
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 474 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 533
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 534 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 579
>gi|384439305|ref|YP_005654029.1| ATPase AAA-2 [Thermus sp. CCB_US3_UF1]
gi|359290438|gb|AEV15955.1| ATPase AAA-2 [Thermus sp. CCB_US3_UF1]
Length = 736
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 16/171 (9%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR-RGAGSKGDMWLLFMGPDRV 676
D + RL + L ++V Q+EA A+A+ + + ++G G R R A S LF+G V
Sbjct: 434 DDEKLMRLEEELKKRVVGQEEAIRALASALRRARVGLGGRTRVAAS-----FLFVGQSGV 488
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIGEAVKR 727
GK ++A AL+E++ G+ +I + +EP + G ++ EAV+R
Sbjct: 489 GKTQLAKALAEVLFGSERALIRF-DMSEFQEPHSISKLIGAPPGYVGYEQGGRLTEAVRR 547
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
PFSV+LL++I++A V + ++ GRL D GR + VI I+T++
Sbjct: 548 QPFSVVLLDEIEKAHPDVYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTSN 598
>gi|289434265|ref|YP_003464137.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289170509|emb|CBH27049.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 722
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 417 MKHLESNLSGKVIGQEDAVKKVAKAIRRSRVGLKAKNRPIGS-----FLFVGPTGVGKTE 471
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 472 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 531
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 532 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 577
>gi|330468567|ref|YP_004406310.1| ATPase AAA-2 domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328811538|gb|AEB45710.1| ATPase AAA-2 domain-containing protein [Verrucosispora maris
AB-18-032]
Length = 851
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 31/191 (16%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRG 659
P ++L E + D+L RL L EKV Q +A +AVA V + + G R
Sbjct: 514 PASQLTEEERDRL---------LRLEGHLHEKVIGQDDAVNAVAEAVRRSRTGLADPHRP 564
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + G + M+ R D E + R
Sbjct: 565 MGS-----FLFLGPTGVGKTELARALAEALFGEADRMV----RVDMSEFQERHTVSRLVG 615
Query: 712 ----VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREIS 767
G ++ EAV+R P++V+LL++I++A V + + ++ GRL DS GR ++
Sbjct: 616 APPGYVGYEEAGQLTEAVRRRPYAVVLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVN 675
Query: 768 LGNVIFILTAD 778
N + I+T++
Sbjct: 676 FKNTVLIMTSN 686
>gi|254827942|ref|ZP_05232629.1| ATP-dependent protease [Listeria monocytogenes FSL N3-165]
gi|258600324|gb|EEW13649.1| ATP-dependent protease [Listeria monocytogenes FSL N3-165]
Length = 724
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L ++L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 419 MKNLERNLTGKVIGQEDAVKKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 473
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G + MI L E+ V G ++ E V+RNP+S+
Sbjct: 474 LGRTLARELFGTTEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 533
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 534 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 579
>gi|386043323|ref|YP_005962128.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Listeria
monocytogenes 10403S]
gi|404410242|ref|YP_006695830.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|345536557|gb|AEO05997.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Listeria
monocytogenes 10403S]
gi|404230068|emb|CBY51472.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC5850]
Length = 724
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L ++L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 419 MKNLERNLTGKVIGQEDAVKKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 473
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G + MI L E+ V G ++ E V+RNP+S+
Sbjct: 474 LGRTLARELFGTTEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 533
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 534 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 579
>gi|325288483|ref|YP_004264664.1| ATPase AAA [Syntrophobotulus glycolicus DSM 8271]
gi|324963884|gb|ADY54663.1| ATPase AAA-2 domain protein [Syntrophobotulus glycolicus DSM 8271]
Length = 841
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E ++ +L K L + L E+V Q+EA SAVA +V + + G +R
Sbjct: 494 PVNKLEEEESARLLK---------LEEVLHERVVGQEEAVSAVARSVRRARAGLKDPKRP 544
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS +F+GP VGK ++A AL+E + G +I + E+ V G
Sbjct: 545 IGS-----FIFLGPTGVGKTELARALAEALFGDENSLIRVDMSEYMEKHAVSRMVGSPPG 599
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R P+SV+L ++I++A V + + +E GRL DS GR + N
Sbjct: 600 YVGHDEGGQLTEAVRRKPYSVLLFDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNC 659
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 660 VLMMTSN 666
>gi|254852492|ref|ZP_05241840.1| ATP-dependent Clp protease [Listeria monocytogenes FSL R2-503]
gi|300764207|ref|ZP_07074202.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL N1-017]
gi|404280551|ref|YP_006681449.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404286411|ref|YP_006692997.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|405755076|ref|YP_006678540.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|417315064|ref|ZP_12101751.1| ATP-dependent protease [Listeria monocytogenes J1816]
gi|258605801|gb|EEW18409.1| ATP-dependent Clp protease [Listeria monocytogenes FSL R2-503]
gi|300515197|gb|EFK42249.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL N1-017]
gi|328466890|gb|EGF37999.1| ATP-dependent protease [Listeria monocytogenes J1816]
gi|404224276|emb|CBY75638.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|404227186|emb|CBY48591.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404245340|emb|CBY03565.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
Length = 722
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 417 MKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 471
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 472 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 531
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 532 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 577
>gi|255027682|ref|ZP_05299668.1| ATP-dependent protease [Listeria monocytogenes FSL J2-003]
Length = 439
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L ++L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 141 MKNLERNLTGKVIGQEDAVKKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 195
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G + MI L E+ V G ++ E V+RNP+S+
Sbjct: 196 LGRTLARELFGTTEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 255
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 256 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 301
>gi|452974749|gb|EME74569.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
sonorensis L12]
Length = 697
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D K L +L +V Q+EA VA V + + G K R GS LF+GP V
Sbjct: 393 DQKKMKELEANLGSRVIGQKEAVKKVAKAVRRSRAGLKAKDRPVGS-----FLFVGPTGV 447
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK +++ L+E + G +I L E+ V G D+ G E V+RN
Sbjct: 448 GKTELSKRLAEELFGTKDSIIRLDMSEYMEKHAVSKLIGSPPGYVGHDEAGQLTEKVRRN 507
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S++LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 508 PYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 557
>gi|386725033|ref|YP_006191359.1| protein ClpE [Paenibacillus mucilaginosus K02]
gi|384092158|gb|AFH63594.1| ClpE [Paenibacillus mucilaginosus K02]
Length = 713
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKM 681
K L + L KV Q EA VA V + + G + +K LF+GP VGK ++
Sbjct: 412 LKDLARHLEAKVIGQPEAVRQVARAVRRSRAGLAPK----NKPIASFLFVGPTGVGKTEL 467
Query: 682 ASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVI 733
+ +L+E + G++ MI L E+ V G ++ E V+RNP+S+I
Sbjct: 468 SKSLAEELFGSADAMIRLDMSEYMEKHSVSKLIGSPPGYVGHEEAGQLTERVRRNPYSII 527
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITL 793
LL++I++A V+ + +E GRL DS GR +S + + I+T++ G+T
Sbjct: 528 LLDEIEKAHPDVQHMFLQVLEDGRLTDSQGRTVSFKDTVIIMTSNA----------GVT- 576
Query: 794 DEKKLTSLASGE 805
D KK+T S E
Sbjct: 577 DRKKITVGFSAE 588
>gi|229827966|ref|ZP_04454035.1| hypothetical protein GCWU000342_00014 [Shuttleworthia satelles DSM
14600]
gi|229792560|gb|EEP28674.1| hypothetical protein GCWU000342_00014 [Shuttleworthia satelles DSM
14600]
Length = 811
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 46/251 (18%)
Query: 539 GDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISS 598
G++ ++ + + ++Q ++ S R VL S V E E T I
Sbjct: 447 GESEKVKAKLEAAQKRQK-----RSSARKKRVLTESAVAEVVAEWTKI------------ 489
Query: 599 EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG---NG 655
P +KL++S+ +L +RL ++ ++V Q+EA AVA V + +LG G
Sbjct: 490 --PVSKLNQSEASRL---------RRLEATIHKRVIGQEEAVEAVARAVRRGRLGLKTPG 538
Query: 656 KRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR---- 711
K G+ LF+GP VGK +++ AL+E V G MI + E+ V
Sbjct: 539 KPIGS-------FLFLGPTGVGKTEVSKALAEAVFGTEEAMIRVDMTEYMEKQSVAKIIG 591
Query: 712 ----VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREIS 767
G ++ E V+RNP+SVIL ++I++A V + + ++ G + DS GR++
Sbjct: 592 SPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQILDDGHVTDSQGRKVD 651
Query: 768 LGNVIFILTAD 778
N I I+T++
Sbjct: 652 FKNTIIIMTSN 662
>gi|23098336|ref|NP_691802.1| ATP-dependent Clp proteinase [Oceanobacillus iheyensis HTE831]
gi|22776562|dbj|BAC12837.1| ATP-dependent Clp proteinase (ClpE) [Oceanobacillus iheyensis
HTE831]
Length = 712
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ + K L L +KV Q EA VA + + + G K+R GS LF+GP V
Sbjct: 410 EQEKMKNLSDQLSQKVIGQNEAVQKVAKAIRRSRAGLKAKQRPIGS-----FLFVGPTGV 464
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++ L+E + G+ M+ L E+ V G ++ E ++RN
Sbjct: 465 GKTELTKVLAEELFGSRDSMVRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTERIRRN 524
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S++LL++I++A V+ + ME G+L DS GR++S + + I+T++
Sbjct: 525 PYSILLLDEIEKAHPDVQNMFLQIMEDGQLTDSQGRKVSFKDTVIIMTSN 574
>gi|350265667|ref|YP_004876974.1| ATP-dependent Clp protease ATP-binding subunit clpE [Bacillus
subtilis subsp. spizizenii TU-B-10]
gi|349598554|gb|AEP86342.1| ATP-dependent Clp protease ATP-binding subunit clpE [Bacillus
subtilis subsp. spizizenii TU-B-10]
Length = 658
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L E+V Q+ A VA V + + G K R GS LF+GP VGK +
Sbjct: 359 MKELEAKLRERVIGQEAAVQKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGVGKTE 413
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L++ + G MI L E+ V G ++ E V+RNP+S+
Sbjct: 414 LSKTLADELFGTKDAMIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSI 473
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 474 VLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 519
>gi|254931380|ref|ZP_05264739.1| ATP-dependent Clp protease [Listeria monocytogenes HPB2262]
gi|293582931|gb|EFF94963.1| ATP-dependent Clp protease [Listeria monocytogenes HPB2262]
Length = 722
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 417 MKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 471
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 472 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 531
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 532 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 577
>gi|302867374|ref|YP_003836011.1| ATPase AAA-2 domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|302570233|gb|ADL46435.1| ATPase AAA-2 domain protein [Micromonospora aurantiaca ATCC 27029]
Length = 849
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 126/277 (45%), Gaps = 44/277 (15%)
Query: 522 LLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERA------VSPLNSPVRTDLV-LGRS 574
L R P + +L + L +T + VS + ERA ++ L VR G S
Sbjct: 433 LRTRTPAEDVRELEQQLDETRRDKEQAVSDEQYERASALRDRLAELEDQVRRARGDEGPS 492
Query: 575 KVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVW 634
V E P T I V I P +L E + D+L RL L EK+
Sbjct: 493 HVPEVGP--TEIAEVVSRATGI----PVTQLTEEERDRL---------LRLEGHLHEKII 537
Query: 635 WQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGAS 693
Q +A SAVA V + + G R GS LF+GP VGK ++A AL+E + G +
Sbjct: 538 GQDDAVSAVAEAVRRSRTGLADPDRPMGS-----FLFLGPTGVGKTELARALAEALFGEA 592
Query: 694 PIMIPLGPRRDHEEPEVR------------VRGKTALDKIGEAVKRNPFSVILLEDIDEA 741
M+ R D E + R G ++ EAV+R P++V+LL++I++A
Sbjct: 593 DRMV----RVDMSEFQERHTVSRLVGAPPGYVGYEEAGQLTEAVRRRPYAVVLLDEIEKA 648
Query: 742 DMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V + + ++ GRL DS GR ++ N + I+T++
Sbjct: 649 HPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSN 685
>gi|254993258|ref|ZP_05275448.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Listeria
monocytogenes FSL J2-064]
Length = 722
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 417 MKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 471
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 472 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 531
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 532 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 577
>gi|46907229|ref|YP_013618.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Listeria
monocytogenes serotype 4b str. F2365]
gi|254823731|ref|ZP_05228732.1| ATP-dependent Clp protease [Listeria monocytogenes FSL J1-194]
gi|405752219|ref|YP_006675684.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|46880496|gb|AAT03795.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Listeria
monocytogenes serotype 4b str. F2365]
gi|293592952|gb|EFG00713.1| ATP-dependent Clp protease [Listeria monocytogenes FSL J1-194]
gi|404221419|emb|CBY72782.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC2378]
Length = 722
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 417 MKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 471
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 472 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 531
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 532 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 577
>gi|397571754|gb|EJK47942.1| chaperone CLPB [Thalassiosira oceanica]
Length = 924
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 22/188 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGA 660
P NKL +++ +++ K D L E+V Q+EA AV ++ + K G +
Sbjct: 569 PANKLTQTERERILKLGD---------RLKERVVGQEEAVGAVVDSIMRSKAGLAR---- 615
Query: 661 GSKGDMWLLFMGPDRVGKKKMASAL-SELVSGASPIMIPLGPRRDHEEPEVR-------- 711
S+ D LF+GP GK ++A AL SEL G ++ + EE V
Sbjct: 616 ASQPDSSFLFLGPTGTGKTELAKALFSELYDGDERSLVRIDMSEYTEEHSVSRLIGSPPG 675
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P++V+L +++++A + + + ++ GRL DS GR + N
Sbjct: 676 YIGHEEGGQLTEAVRRKPYTVVLFDEVEKAHKKILTVLLQVLDEGRLTDSRGRTVDFTNT 735
Query: 772 IFILTADW 779
+ ILT++
Sbjct: 736 VIILTSNL 743
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 15/170 (8%)
Query: 10 QTLTPEAASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNS--SHPL 67
+T+T L ++ A H Q P+H+A+ L A G + +S S +
Sbjct: 5 RTMTDATTKALQEALVIARDNGHSQAEPIHLASALFAEDDGIGSRVVARSDAGCGPSSII 64
Query: 68 QCRALELCFSVALERLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQQQQPLLA 127
R + S A+ P QN P + +S++L ++RA A + L+A
Sbjct: 65 DVRLVRQGLSRAMLTRPA--QNPPPH-EASMSSSLQKVIQRAMA-----LAKSNADSLVA 116
Query: 128 VKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSS 177
L+ L+++I DD S V+ A + V+ T+ QS+ ++++S
Sbjct: 117 ----LDHLLVAIYDDRSTKDVLESAGLTKKVVEKTV-QSIRGKRKITSTS 161
>gi|217964903|ref|YP_002350581.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|386007728|ref|YP_005926006.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes L99]
gi|386026321|ref|YP_005947097.1| Clp protease ATP-binding subunit [Listeria monocytogenes M7]
gi|217334173|gb|ACK39967.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|307570538|emb|CAR83717.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes L99]
gi|336022902|gb|AEH92039.1| Clp protease ATP-binding subunit [Listeria monocytogenes M7]
Length = 724
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 419 MKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 473
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 474 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 533
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 534 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 579
>gi|226223615|ref|YP_002757722.1| ATP-dependent protease [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|386731752|ref|YP_006205248.1| ATP-dependent protease [Listeria monocytogenes 07PF0776]
gi|406703773|ref|YP_006754127.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes L312]
gi|225876077|emb|CAS04783.1| ATP-dependent protease [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|384390510|gb|AFH79580.1| ATP-dependent protease [Listeria monocytogenes 07PF0776]
gi|406360803|emb|CBY67076.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes L312]
Length = 722
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 417 MKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 471
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 472 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 531
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 532 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 577
>gi|339446255|ref|YP_004712259.1| hypothetical protein EGYY_28870 [Eggerthella sp. YY7918]
gi|338906007|dbj|BAK45858.1| hypothetical protein EGYY_28870 [Eggerthella sp. YY7918]
Length = 907
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L + L E+V Q EA SAVA + + + G + R GS LF+GP VGK ++A
Sbjct: 572 LEEKLHERVVGQDEAVSAVAGAIRRNRAGLSDPDRPIGS-----FLFLGPTGVGKTELAK 626
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILL 735
AL+E + + M+ + E+ V+ G D+ G EAV+R P+SVILL
Sbjct: 627 ALAEYLFDSEKSMVRIDMSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRKPYSVILL 686
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK-FLSQG 790
++I++A V + + ++ GRL D GR +S N I I+T++ S++ F +QG
Sbjct: 687 DEIEKAHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNVGSQSIREFSNQG 742
>gi|290893448|ref|ZP_06556432.1| ATP-dependent Clp protease [Listeria monocytogenes FSL J2-071]
gi|404407452|ref|YP_006690167.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
gi|290556949|gb|EFD90479.1| ATP-dependent Clp protease [Listeria monocytogenes FSL J2-071]
gi|404241601|emb|CBY63001.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC2376]
Length = 724
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 419 MKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 473
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 474 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 533
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 534 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 579
>gi|159037904|ref|YP_001537157.1| ATPase [Salinispora arenicola CNS-205]
gi|157916739|gb|ABV98166.1| ATPase AAA-2 domain protein [Salinispora arenicola CNS-205]
Length = 848
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 22/172 (12%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGK 678
D RL L EKV Q +A +AVA V + + G R GS LF+GP VGK
Sbjct: 524 DRLLRLEGHLHEKVVGQDDAVNAVAEAVRRSRTGLADPERPMGS-----FLFLGPTGVGK 578
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR------------VRGKTALDKIGEAVK 726
++A AL+E + G + M+ R D E + R G ++ EAV+
Sbjct: 579 TELARALAEALFGEADRMV----RVDMSEFQERHTVSRLVGAPPGYVGYEEAGQLTEAVR 634
Query: 727 RNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
R P++V+LL++I++A V + + ++ GRL DS GR ++ N + I+T++
Sbjct: 635 RRPYAVVLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSN 686
>gi|383828348|ref|ZP_09983437.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora xinjiangensis XJ-54]
gi|383461001|gb|EID53091.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora xinjiangensis XJ-54]
Length = 843
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 14/163 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L + L +V Q EA +AVA +V + + G + R +GS LF+GP VGK ++A
Sbjct: 532 LEEHLHGRVVGQDEAVAAVAESVRRARAGLAEPDRPSGS-----FLFLGPTGVGKTELAR 586
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
AL+E + G+ MI L E V G ++ EAV+R P+SVILL
Sbjct: 587 ALAEALFGSEESMIRLDMSEYGERHTVSRLVGAPPGYVGYEEAGQLTEAVRRRPYSVILL 646
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + +E GRL D GR ++ N + I+T++
Sbjct: 647 DEIEKAHPDVFNMLLQVLEDGRLTDGRGRTVNFTNTVLIMTSN 689
>gi|405749354|ref|YP_006672820.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|417317215|ref|ZP_12103837.1| ATP-dependent protease [Listeria monocytogenes J1-220]
gi|424822725|ref|ZP_18247738.1| ATP-dependent Clp protease [Listeria monocytogenes str. Scott A]
gi|328475348|gb|EGF46121.1| ATP-dependent protease [Listeria monocytogenes J1-220]
gi|332311405|gb|EGJ24500.1| ATP-dependent Clp protease [Listeria monocytogenes str. Scott A]
gi|404218554|emb|CBY69918.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
Length = 722
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 417 MKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 471
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 472 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 531
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 532 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 577
>gi|312138354|ref|YP_004005690.1| clp peptidase ATP-binding subunit [Rhodococcus equi 103S]
gi|311887693|emb|CBH47005.1| putative Clp peptidase ATP-binding subunit [Rhodococcus equi 103S]
Length = 810
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + +RL L +V Q++A A+A V + + G G RR GS LF+GP V
Sbjct: 498 DKERLRRLEDELHRRVVGQEDAVKAIARAVRRSRTGMGDPRRPVGS-----FLFLGPTGV 552
Query: 677 GKKKMASALSELVSGASPIMIPL-----GPRRDHEE----PEVRVRGKTALDKIGEAVKR 727
GK ++A AL++ + G M+ L G R P V G ++ E V+R
Sbjct: 553 GKTELAKALAQSLFGDESKMLRLDMSEFGERHTASRLVGAPPGYV-GYGEAGQLTEQVRR 611
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPD----- 782
+P+SVILL++I++A V + + ++ GRL D GR + N + I+T++ D
Sbjct: 612 HPYSVILLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVLIMTSNLGSDIISSK 671
Query: 783 --SLKFLSQGITLDEKKLTSLASGEWQLRLSIR 813
+L F + EK L G +LR S R
Sbjct: 672 GGALGFTTGDAAATEKPLRDRVMG--RLRESFR 702
>gi|315506221|ref|YP_004085108.1| ATPase AAA-2 domain-containing protein [Micromonospora sp. L5]
gi|315412840|gb|ADU10957.1| ATPase AAA-2 domain protein [Micromonospora sp. L5]
Length = 849
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 126/277 (45%), Gaps = 44/277 (15%)
Query: 522 LLARQPFQPKVQLNRNLGDTLQLNSNMVSSQPAERA------VSPLNSPVRTDLV-LGRS 574
L R P + +L + L +T + VS + ERA ++ L VR G S
Sbjct: 433 LRTRTPAEDVRELEQQLDETRRDKEQAVSDEQYERASALRDRLAELEDQVRRARGDEGPS 492
Query: 575 KVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVW 634
V E P T I V I P +L E + D+L RL L EK+
Sbjct: 493 HVPEVGP--TEIAEVVSRATGI----PVTQLTEEERDRL---------LRLEGHLHEKII 537
Query: 635 WQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGAS 693
Q +A SAVA V + + G R GS LF+GP VGK ++A AL+E + G +
Sbjct: 538 GQDDAVSAVAEAVRRSRTGLADPDRPMGS-----FLFLGPTGVGKTELARALAEALFGEA 592
Query: 694 PIMIPLGPRRDHEEPEVR------------VRGKTALDKIGEAVKRNPFSVILLEDIDEA 741
M+ R D E + R G ++ EAV+R P++V+LL++I++A
Sbjct: 593 DRMV----RVDMSEFQERHTVSRLVGAPPGYVGYEEAGQLTEAVRRRPYAVVLLDEIEKA 648
Query: 742 DMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V + + ++ GRL DS GR ++ N + I+T++
Sbjct: 649 HPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSN 685
>gi|422809083|ref|ZP_16857494.1| ATP-dependent Clp protease [Listeria monocytogenes FSL J1-208]
gi|378752697|gb|EHY63282.1| ATP-dependent Clp protease [Listeria monocytogenes FSL J1-208]
Length = 724
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 419 MKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 473
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 474 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 533
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 534 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 579
>gi|119489291|ref|ZP_01622098.1| ATPase [Lyngbya sp. PCC 8106]
gi|119454765|gb|EAW35910.1| ATPase [Lyngbya sp. PCC 8106]
Length = 928
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ +L + L L ++V QQEA +AV+ + + + G R
Sbjct: 591 PVNRLLESERQKLLQ---------LESHLHQRVIGQQEAVAAVSAAIRRARAGMKDPSRP 641
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LFMGP VGK ++A AL+E + + +I + E+ V G
Sbjct: 642 IGS-----FLFMGPTGVGKTELARALAEFLFDSEDSLIRIDMSEYMEKHAVSRLVGAPPG 696
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R+P+SVIL +++++A V + + ++ GR+ DS+GR++ N
Sbjct: 697 YIGYDEGGQLSEAVRRHPYSVILFDEVEKAHPDVFNILLQVLDDGRITDSHGRKVDFRNT 756
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 757 VIVMTSN 763
>gi|443291207|ref|ZP_21030301.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Micromonospora lupini str. Lupac 08]
gi|385885609|emb|CCH18408.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Micromonospora lupini str. Lupac 08]
Length = 851
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 31/191 (16%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRG 659
P ++L E + D+L RL L EKV Q +A +AVA V + + G R
Sbjct: 514 PVSQLTEEERDRLL---------RLEGHLHEKVVGQDDAVTAVAEAVRRSRAGLADPERP 564
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + G + M+ R D E + R
Sbjct: 565 MGS-----FLFLGPTGVGKTELARALAEALFGEADRMV----RVDMSEFQERHTVSRLVG 615
Query: 712 ----VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREIS 767
G ++ EAV+R P++V+LL++I++A V + + ++ GRL DS GR ++
Sbjct: 616 APPGYVGYEEAGQLTEAVRRRPYAVVLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVN 675
Query: 768 LGNVIFILTAD 778
N + I+T++
Sbjct: 676 FKNTVLIMTSN 686
>gi|302385738|ref|YP_003821560.1| ATPase AAA-2 domain-containing protein [Clostridium saccharolyticum
WM1]
gi|302196366|gb|ADL03937.1| ATPase AAA-2 domain protein [Clostridium saccharolyticum WM1]
Length = 816
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 26/208 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++++L + L L E+V Q+EA +AV+ + + ++G +R
Sbjct: 491 PVRKLEEGESERL---------RNLETILHERVIGQEEAVTAVSKAIRRGRVGLKDPKRP 541
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ ALSE + G +I + E+ V G
Sbjct: 542 IGS-----FLFLGPTGVGKTELSKALSEAMFGTEHALIRVDMSEYMEKHSVSKMIGSPPG 596
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+RNP+SVIL ++I++A V + + ++ G + D+ GR+I N
Sbjct: 597 YIGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKIDFKNT 656
Query: 772 IFILTADWLPDSL---KFLSQGITLDEK 796
+ I+T++ +++ K L G DEK
Sbjct: 657 VIIMTSNAGAENIISPKRLGFGAVADEK 684
>gi|126695565|ref|YP_001090451.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9301]
gi|126542608|gb|ABO16850.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
ClpB [Prochlorococcus marinus str. MIT 9301]
Length = 918
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L EKV Q++A AV+ + + ++G +R GS LFMGP VGK ++A +L+
Sbjct: 614 LSEKVIGQEKAIEAVSAAIRRARVGMKSPKRPIGS-----FLFMGPTGVGKTELAKSLAT 668
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ ++ L E+ V G ++ EAV+R P+SVILL++I+
Sbjct: 669 ALFDEEDALLRLDMSEYMEKNAVARLLGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIE 728
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKL 798
+A V + + ++ GRL DS GR + N + I+T++ S+ SQ I+ + KL
Sbjct: 729 KAHSEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSNLAGKSILEYSQKISRSDGKL 787
>gi|422409150|ref|ZP_16486111.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria monocytogenes FSL F2-208]
gi|313609585|gb|EFR85116.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
Length = 433
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 128 MKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 182
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 183 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 242
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 243 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 288
>gi|415886308|ref|ZP_11548131.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
gi|387588961|gb|EIJ81282.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
Length = 814
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 27/209 (12%)
Query: 589 VKDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
V+D +SS P +KL E++ ++L K L + L +V Q+EA A++
Sbjct: 473 VEDIASVVSSWTGIPVSKLAETETEKLLK---------LEEILHSRVIGQEEAVKAISKA 523
Query: 647 VTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDH 705
V + + G +R GS +F+GP VGK ++A AL+E + G MI + ++
Sbjct: 524 VRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAEAMFGDEDAMIRI-DMSEY 577
Query: 706 EEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERG 756
E R G ++ G E V+R P+SVILL++I++A V + + +E G
Sbjct: 578 MEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDG 637
Query: 757 RLVDSYGREISLGNVIFILTADWLPDSLK 785
RL DS GR + N + I+T++ ++LK
Sbjct: 638 RLTDSKGRTVDFRNTVLIMTSNVGAEALK 666
>gi|288818844|ref|YP_003433192.1| chaperone protein [Hydrogenobacter thermophilus TK-6]
gi|384129594|ref|YP_005512207.1| ATPase [Hydrogenobacter thermophilus TK-6]
gi|288788244|dbj|BAI69991.1| chaperone protein [Hydrogenobacter thermophilus TK-6]
gi|308752431|gb|ADO45914.1| ATPase AAA-2 domain protein [Hydrogenobacter thermophilus TK-6]
Length = 984
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG--NGKRR 658
P +KL E +++QK L RL + L +V Q+ A AVA + + + G + KR
Sbjct: 666 PVSKLKE---EEMQKLL------RLEEELHRRVIDQEHAVKAVAEAIRRARAGLKDPKRP 716
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR------- 711
A LF+GP VGK +++ AL+EL+ G +I L EE V
Sbjct: 717 IA------TFLFLGPTGVGKTELSKALAELLFGDEEALIRLDMSEFKEEHSVAKLIGAPP 770
Query: 712 -VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G K+ EAV+R P+SVILL++I++A V + + GRL DS+GR + N
Sbjct: 771 GYVGYEEGGKLTEAVRRKPYSVILLDEIEKAHPRVFDLFLQVFDDGRLTDSHGRTVDFRN 830
Query: 771 VIFILTAD 778
+ I+T++
Sbjct: 831 TVIIMTSN 838
>gi|167629433|ref|YP_001679932.1| clpc ATPase [Heliobacterium modesticaldum Ice1]
gi|167592173|gb|ABZ83921.1| clpc ATPase [Heliobacterium modesticaldum Ice1]
Length = 814
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 23/194 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L ES++ +L K L + L +V Q EA +AV+ V + + G +R
Sbjct: 490 PVTRLAESESARLLK---------LEEELHRRVIGQDEAVAAVSRAVRRARAGLKDPKRP 540
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK--- 715
GS +F+GP VGK ++A AL+E + G M+ + E+ V R+ G
Sbjct: 541 IGS-----FIFLGPTGVGKTELARALAEALFGQEDAMVRIDMSEYMEKHSVSRLVGAPPG 595
Query: 716 -TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R P+SVILL++I++A+ V + + +E GRL DS GR + N
Sbjct: 596 YIGHDEGGQLTEAVRRRPYSVILLDEIEKANPEVFNILLQVLEDGRLTDSKGRTVDFRNT 655
Query: 772 IFILTADWLPDSLK 785
+ I+T++ ++K
Sbjct: 656 VIIMTSNVGAQTIK 669
>gi|424713878|ref|YP_007014593.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Listeria
monocytogenes serotype 4b str. LL195]
gi|424013062|emb|CCO63602.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Listeria
monocytogenes serotype 4b str. LL195]
Length = 730
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 425 MKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 479
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 480 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 539
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 540 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 585
>gi|379727599|ref|YP_005319784.1| ClpB protein [Melissococcus plutonius DAT561]
gi|376318502|dbj|BAL62289.1| ClpB protein [Melissococcus plutonius DAT561]
Length = 868
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 26/205 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA A++ V + + G R
Sbjct: 550 PITKLVEGEREKLIK---------LNETLHQRVMGQNEAVDALSDAVIRARAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKHHVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP+++IL ++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIILFDEIEKAHSDVFNLLLQVLDDGRLTDSMGRIVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLDEK 796
+ I+T++ +FL +G+T D K
Sbjct: 716 VLIMTSNI---GSQFLLEGVTSDGK 737
>gi|337749338|ref|YP_004643500.1| protein ClpE [Paenibacillus mucilaginosus KNP414]
gi|336300527|gb|AEI43630.1| ClpE [Paenibacillus mucilaginosus KNP414]
Length = 712
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 12/186 (6%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKM 681
K L + L KV Q EA VA V + + G + +K LF+GP VGK ++
Sbjct: 411 LKDLARHLEAKVIGQPEAVRQVARAVRRSRAGLAPK----NKPIASFLFIGPTGVGKTEL 466
Query: 682 ASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVI 733
+ +L+E + G + MI L E+ V G ++ E V+RNP+S+I
Sbjct: 467 SKSLAEELFGHADAMIRLDMSEYMEKHSVSKLIGSPPGYVGHEEAGQLTERVRRNPYSII 526
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITL 793
LL++I++A V+ + +E GRL DS GR +S + + I+T++ K ++ G +
Sbjct: 527 LLDEIEKAHPDVQHMFLQVLEDGRLTDSQGRTVSFKDTVIIMTSNAGVTDRKKITVGFSA 586
Query: 794 DEKKLT 799
+E T
Sbjct: 587 EESTQT 592
>gi|295702321|ref|YP_003595396.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
gi|294799980|gb|ADF37046.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
Length = 813
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 16/167 (9%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +V Q+EA AVA V + + G +R GS +F+GP VGK ++A AL+E
Sbjct: 507 LHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAE 561
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDI 738
+ G MI + ++ E R G ++ G E V+R P+SV+LL++I
Sbjct: 562 SIFGDEDAMIRI-DMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEI 620
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
++A V + + +E GRL DS GR + N I I+T++ D+LK
Sbjct: 621 EKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGADTLK 667
>gi|363899121|ref|ZP_09325632.1| hypothetical protein HMPREF9625_00292 [Oribacterium sp. ACB1]
gi|395209294|ref|ZP_10398388.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. ACB8]
gi|361959451|gb|EHL12738.1| hypothetical protein HMPREF9625_00292 [Oribacterium sp. ACB1]
gi|394704925|gb|EJF12454.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. ACB8]
Length = 818
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL ES++ +L+K D L +V Q EA AV+ + + ++G +R
Sbjct: 490 PAKKLSESESVKLRKLEDL---------LHTRVIGQNEAVHAVSQAIKRGRVGLKDPKRP 540
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS +F+GP VGK +++ AL+E+V G+ +I + E+ V G
Sbjct: 541 IGS-----FMFLGPTGVGKTELSKALAEVVFGSEQNLIRVDMSEYMEKYSVSKMIGSPPG 595
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+RNP+SVIL ++I++A V + + ++ G + DS GR++S N
Sbjct: 596 YVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVLNILLQVLDDGHITDSQGRKVSFKNT 655
Query: 772 IFILTAD 778
I I+T++
Sbjct: 656 IIIMTSN 662
>gi|336437637|ref|ZP_08617341.1| hypothetical protein HMPREF0988_02926 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336004940|gb|EGN34993.1| hypothetical protein HMPREF0988_02926 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 814
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL ES +LQK L K+L +V Q+EA SAVA V + ++G RR
Sbjct: 489 PVQKLEESDAQRLQK---------LEKTLHRRVIGQEEAVSAVARAVKRGRVGLKDPRRP 539
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ AL+E + G MI + E+ V
Sbjct: 540 IGS-----FLFLGPTGVGKTELSKALAETLFGREDSMIRVDMSEYMEKHSVAKMIGSPPG 594
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ + V+ +P+SVIL ++I++A V + + ++ G + DS GR++ N
Sbjct: 595 YVGHEEGGQLSDQVRTHPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFSNT 654
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 655 VIIMTSN 661
>gi|16800065|ref|NP_470333.1| ATP-dependent protease [Listeria innocua Clip11262]
gi|16413455|emb|CAC96227.1| ATP-dependent protease [Listeria innocua Clip11262]
Length = 724
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q +A VA + + ++G K R GS LF+GP VGK +
Sbjct: 419 MKNLESNLTGKVIGQDDAVKKVAKAIRRSRVGLKAKNRPIGS-----FLFVGPTGVGKTE 473
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 474 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 533
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 534 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 579
>gi|422003390|ref|ZP_16350620.1| ATP-dependent Clp protease [Leptospira santarosai serovar Shermani
str. LT 821]
gi|417257874|gb|EKT87269.1| ATP-dependent Clp protease [Leptospira santarosai serovar Shermani
str. LT 821]
Length = 848
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L +S + P K+ ES++D+L RL L ++V Q EA +A V
Sbjct: 489 DILSVVSLWTGIPLEKMEESESDKLL---------RLEDELKKRVVGQGEAIEKIAKAVR 539
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 540 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 593
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 594 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 653
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 654 TDTKGRKVNFRDTIIIMTSN 673
>gi|294496954|ref|YP_003560654.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
gi|294346891|gb|ADE67220.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
Length = 812
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 16/167 (9%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +V Q+EA AVA V + + G +R GS +F+GP VGK ++A AL+E
Sbjct: 506 LHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAE 560
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDI 738
+ G MI + ++ E R G ++ G E V+R P+SV+LL++I
Sbjct: 561 SIFGDEDAMIRI-DMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEI 619
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
++A V + + +E GRL DS GR + N I I+T++ D+LK
Sbjct: 620 EKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGADTLK 666
>gi|423100093|ref|ZP_17087800.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
gi|370793094|gb|EHN60932.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
Length = 724
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q +A VA + + ++G K R GS LF+GP VGK +
Sbjct: 419 MKNLESNLTGKVIGQDDAVKKVAKAIRRSRVGLKAKNRPIGS-----FLFVGPTGVGKTE 473
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 474 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 533
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 534 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 579
>gi|359684648|ref|ZP_09254649.1| ATP-dependent Clp protease [Leptospira santarosai str. 2000030832]
gi|418743333|ref|ZP_13299697.1| negative regulator of genetic competence ClpC/MecB [Leptospira
santarosai str. CBC379]
gi|418754674|ref|ZP_13310896.1| negative regulator of genetic competence ClpC/MecB [Leptospira
santarosai str. MOR084]
gi|421110984|ref|ZP_15571469.1| negative regulator of genetic competence ClpC/MecB [Leptospira
santarosai str. JET]
gi|409964775|gb|EKO32650.1| negative regulator of genetic competence ClpC/MecB [Leptospira
santarosai str. MOR084]
gi|410795887|gb|EKR93779.1| negative regulator of genetic competence ClpC/MecB [Leptospira
santarosai str. CBC379]
gi|410803640|gb|EKS09773.1| negative regulator of genetic competence ClpC/MecB [Leptospira
santarosai str. JET]
gi|456874450|gb|EMF89748.1| negative regulator of genetic competence ClpC/MecB [Leptospira
santarosai str. ST188]
Length = 848
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L +S + P K+ ES++D+L RL L ++V Q EA +A V
Sbjct: 489 DILSVVSLWTGIPLEKMEESESDKLL---------RLEDELKKRVVGQGEAIEKIAKAVR 539
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL+ + G M+ + ++ E
Sbjct: 540 RARTGFKSERRPTGS-----FIFLGPTGVGKTELAKALANFLFGNDDAMLRV-DMSEYME 593
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 594 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIFNILLQIMEEGNL 653
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 654 TDTKGRKVNFRDTIIIMTSN 673
>gi|256389896|ref|YP_003111460.1| ATPase AAA [Catenulispora acidiphila DSM 44928]
gi|256356122|gb|ACU69619.1| ATPase AAA-2 domain protein [Catenulispora acidiphila DSM 44928]
Length = 841
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 617 LDPDSFKRLLK---SLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMG 672
L+ D RLLK +L ++V Q+EA +A+A V + + G G R GS LF+G
Sbjct: 521 LNEDERTRLLKLEDALHDRVVGQEEAVTAIAEAVRRSRAGMGDPNRPTGS-----FLFLG 575
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEA 724
P VGK ++A AL+EL+ G +I E+ V G ++ E
Sbjct: 576 PTGVGKTELAKALAELLFGDEDRLIRFDMSEFQEKHTVSRLLGSPPGYVGYEEAGQLTER 635
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V+R P+SVIL +++++A + + + ++ GRL D+ GR + + + I+T++
Sbjct: 636 VRRKPYSVILFDEVEKAHPDIFNTLLQVLDDGRLTDAQGRTVDFRHTVVIMTSN 689
>gi|384049297|ref|YP_005497314.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
gi|345446988|gb|AEN92005.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
Length = 813
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 16/167 (9%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +V Q+EA AVA V + + G +R GS +F+GP VGK ++A AL+E
Sbjct: 507 LHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAE 561
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDI 738
+ G MI + ++ E R G ++ G E V+R P+SV+LL++I
Sbjct: 562 SIFGDEDAMIRI-DMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEI 620
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
++A V + + +E GRL DS GR + N I I+T++ D+LK
Sbjct: 621 EKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGADTLK 667
>gi|145594688|ref|YP_001158985.1| ATPase [Salinispora tropica CNB-440]
gi|145304025|gb|ABP54607.1| ATPase AAA-2 domain protein [Salinispora tropica CNB-440]
Length = 848
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 22/172 (12%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGK 678
D RL L EKV Q +A +AVA V + + G R GS LF+GP VGK
Sbjct: 524 DRLLRLEGHLHEKVVGQDDAVNAVAEAVRRSRTGLADPDRPMGS-----FLFLGPTGVGK 578
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR------------VRGKTALDKIGEAVK 726
++A AL+E + G + M+ R D E + R G ++ EAV+
Sbjct: 579 TELARALAEALFGEADRMV----RVDMSEFQERHTVSRLVGAPPGYVGYEEAGQLTEAVR 634
Query: 727 RNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
R P++V+LL++I++A V + + ++ GRL DS GR ++ N + I+T++
Sbjct: 635 RRPYAVVLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSN 686
>gi|303232394|ref|ZP_07319086.1| ATP-dependent chaperone protein ClpB [Atopobium vaginae PB189-T1-4]
gi|302481478|gb|EFL44546.1| ATP-dependent chaperone protein ClpB [Atopobium vaginae PB189-T1-4]
Length = 974
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 14/188 (7%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L +V Q +A AVA+ V + + G + R GS F+GP VGK +
Sbjct: 605 LKHLEDELHLRVVGQDKAVHAVASAVRRSRAGLSDPHRPLGS-----FFFLGPTGVGKTE 659
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + ++ + E+ V+ G ++ EAV+R P+SV
Sbjct: 660 LAKTLAQALFDDEKALVRIDMSEYMEKFSVQRLIGAPPGYVGYEEGGQLTEAVRRRPYSV 719
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGIT 792
ILL+++++A V G + + ++ GRL D GR++S N I I+T++ D++ T
Sbjct: 720 ILLDEVEKAHPDVFGVLLQVLDDGRLTDGQGRQVSFKNTIIIMTSNIASDAITAAYSNDT 779
Query: 793 LDEKKLTS 800
+DE L S
Sbjct: 780 VDEDTLFS 787
>gi|315281718|ref|ZP_07870283.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria marthii FSL S4-120]
gi|313614643|gb|EFR88222.1| negative regulator of genetic competence ClpC/MecB [Listeria
marthii FSL S4-120]
Length = 585
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 280 MKNLESNLTGKVIGQEDAVKKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 334
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 335 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 394
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 395 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 440
>gi|255024033|ref|ZP_05296019.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
Length = 319
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 41 MKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 95
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 96 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 155
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 156 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 201
>gi|336427981|ref|ZP_08607971.1| hypothetical protein HMPREF0994_03977 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336008460|gb|EGN38477.1| hypothetical protein HMPREF0994_03977 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 813
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 25/199 (12%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D G ++ ++ P +KL E ++++L K L L ++V Q+EA SAVA +
Sbjct: 479 DIAGVVAMWTKIPVSKLEEKESERLLK---------LEGILHKRVIGQEEAVSAVARAMR 529
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ ++G RR GS LF+GP VGK +++ AL+E + G+ +I + E
Sbjct: 530 RGRVGLQDPRRPIGS-----FLFLGPTGVGKTELSKALAEAMFGSENALIRIDMSEYMEG 584
Query: 708 PEVRVR-----GKTALD---KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLV 759
V G D ++ E V+RNP+SV+L +++++A V + + ++ G +
Sbjct: 585 HSVSKLIGSPPGYVGFDDGGQLSEKVRRNPYSVVLFDEVEKAHPDVFNILLQVLDDGHIT 644
Query: 760 DSYGREISLGNVIFILTAD 778
DS GR++S N + I+T++
Sbjct: 645 DSKGRKVSFKNTVLIMTSN 663
>gi|163815425|ref|ZP_02206798.1| hypothetical protein COPEUT_01588 [Coprococcus eutactus ATCC 27759]
gi|158449062|gb|EDP26057.1| ATPase family associated with various cellular activities (AAA)
[Coprococcus eutactus ATCC 27759]
Length = 825
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +KL E ++ +L+K L L ++V Q+EA SAVA + + ++G RR
Sbjct: 489 PVSKLTEKESKRLEK---------LETELHKRVVGQEEAVSAVAKAIKRSRVGLKDPRRP 539
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
G+ LF+GP VGK +++ AL+++V G+ +I + E+ V G
Sbjct: 540 IGT-----FLFLGPTGVGKTELSKALADVVFGSEDALIRVDMSEYMEKHSVSKLIGSPPG 594
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
++ G E V+ NP+SVIL ++I++A V + + ++ G + DS GR++ N
Sbjct: 595 YVGFEEGGQLSEKVRTNPYSVILFDEIEKAHSDVFNILLQVLDDGHITDSQGRKVDFKNT 654
Query: 772 IFILTAD 778
I I+T++
Sbjct: 655 IIIMTSN 661
>gi|56418613|ref|YP_145931.1| ATP-dependent Clp protease ATPase [Geobacillus kaustophilus HTA426]
gi|297528454|ref|YP_003669729.1| ATPase AAA [Geobacillus sp. C56-T3]
gi|375006890|ref|YP_004980520.1| negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|448236388|ref|YP_007400446.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
gi|56378455|dbj|BAD74363.1| ATP-dependent Clp protease ATPase subunit [Geobacillus kaustophilus
HTA426]
gi|297251706|gb|ADI25152.1| ATPase AAA-2 domain protein [Geobacillus sp. C56-T3]
gi|359285736|gb|AEV17420.1| Negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|445205230|gb|AGE20695.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
Length = 810
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 27/209 (12%)
Query: 589 VKDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
V+D +SS P +KL E++ ++L K L + L +V Q EA AVA
Sbjct: 473 VEDIAAVVSSWTGIPVSKLAETETERLLK---------LEEILHSRVVGQDEAVKAVAKA 523
Query: 647 VTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDH 705
V + + G +R GS +F+GP VGK ++A AL+E + G +I + ++
Sbjct: 524 VRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAEAMFGDEDALIRI-DMSEY 577
Query: 706 EEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERG 756
E R G ++ G E V+R P+SV+LL+++++A V + + +E G
Sbjct: 578 MEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDG 637
Query: 757 RLVDSYGREISLGNVIFILTADWLPDSLK 785
RL DS GR + N I I+T++ D+LK
Sbjct: 638 RLTDSKGRTVDFRNTIIIMTSNVGADALK 666
>gi|46198482|ref|YP_004149.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Thermus
thermophilus HB27]
gi|55980511|ref|YP_143808.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Thermus
thermophilus HB8]
gi|46196104|gb|AAS80522.1| ATP-dependent clp protease ATP-binding subunit clpA [Thermus
thermophilus HB27]
gi|55771924|dbj|BAD70365.1| ATP-dependent Clp protease, ATP-binding subunit (ClpA) [Thermus
thermophilus HB8]
Length = 736
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 16/171 (9%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR-RGAGSKGDMWLLFMGPDRV 676
D + RL + L ++V Q+EA A+A + + ++G G R R A S LF+G V
Sbjct: 434 DDEKLMRLEEELRKRVVGQEEAIRALANALRRARVGLGGRTRVAAS-----FLFVGQSGV 488
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIGEAVKR 727
GK ++A AL+E++ G+ +I + +EP + G ++ EAV+R
Sbjct: 489 GKTQLAKALAEVLFGSERALIRF-DMSEFQEPHSISKLIGAPPGYVGYEQGGRLTEAVRR 547
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
PFSV+LL++I++A + + ++ GRL D GR + VI I+T++
Sbjct: 548 QPFSVVLLDEIEKAHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTSN 598
>gi|384430734|ref|YP_005640094.1| ATPase [Thermus thermophilus SG0.5JP17-16]
gi|333966202|gb|AEG32967.1| ATPase AAA-2 domain protein [Thermus thermophilus SG0.5JP17-16]
Length = 736
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 16/171 (9%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR-RGAGSKGDMWLLFMGPDRV 676
D + RL + L ++V Q+EA A+A + + ++G G R R A S LF+G V
Sbjct: 434 DDEKLMRLEEELRKRVVGQEEAIRALANALRRARVGLGGRTRVAAS-----FLFVGQSGV 488
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIGEAVKR 727
GK ++A AL+E++ G+ +I + +EP + G ++ EAV+R
Sbjct: 489 GKTQLAKALAEVLFGSERALIRF-DMSEFQEPHSISKLIGAPPGYVGYEQGGRLTEAVRR 547
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
PFSV+LL++I++A + + ++ GRL D GR + VI I+T++
Sbjct: 548 QPFSVVLLDEIEKAHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTSN 598
>gi|386360953|ref|YP_006059198.1| chaperone ATPase [Thermus thermophilus JL-18]
gi|383509980|gb|AFH39412.1| ATPase with chaperone activity, ATP-binding subunit [Thermus
thermophilus JL-18]
Length = 736
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 16/171 (9%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR-RGAGSKGDMWLLFMGPDRV 676
D + RL + L ++V Q+EA A+A + + ++G G R R A S LF+G V
Sbjct: 434 DDEKLMRLEEELRKRVVGQEEAIRALANALRRARVGLGGRTRVAAS-----FLFVGQSGV 488
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIGEAVKR 727
GK ++A AL+E++ G+ +I + +EP + G ++ EAV+R
Sbjct: 489 GKTQLAKALAEVLFGSERALIRF-DMSEFQEPHSISKLIGAPPGYVGYEQGGRLTEAVRR 547
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
PFSV+LL++I++A + + ++ GRL D GR + VI I+T++
Sbjct: 548 QPFSVVLLDEIEKAHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTSN 598
>gi|379722287|ref|YP_005314418.1| protein ClpE [Paenibacillus mucilaginosus 3016]
gi|378570959|gb|AFC31269.1| ClpE [Paenibacillus mucilaginosus 3016]
Length = 712
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 12/186 (6%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKM 681
K L + L KV Q EA VA V + + G + +K LF+GP VGK ++
Sbjct: 411 LKDLARHLEAKVIGQPEAVRQVARAVRRSRAGLAPK----NKPIASFLFVGPTGVGKTEL 466
Query: 682 ASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVI 733
+ +L+E + G + MI L E+ V G ++ E V+RNP+S+I
Sbjct: 467 SKSLAEELFGRADAMIRLDMSEYMEKHSVSKLIGSPPGYVGHEEAGQLTERVRRNPYSII 526
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITL 793
LL++I++A V+ + +E GRL DS GR +S + + I+T++ K ++ G +
Sbjct: 527 LLDEIEKAHPDVQHMFLQVLEDGRLTDSQGRTVSFKDTVIIMTSNAGVTDRKKITVGFSA 586
Query: 794 DEKKLT 799
+E T
Sbjct: 587 EESTQT 592
>gi|381190271|ref|ZP_09897794.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Thermus sp.
RL]
gi|380451864|gb|EIA39465.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Thermus sp.
RL]
Length = 736
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 16/171 (9%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR-RGAGSKGDMWLLFMGPDRV 676
D + RL + L ++V Q+EA A+A + + ++G G R R A S LF+G V
Sbjct: 434 DDEKLMRLEEELRKRVVGQEEAIRALANALRRARVGLGGRTRVAAS-----FLFVGQSGV 488
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIGEAVKR 727
GK ++A AL+E++ G+ +I + +EP + G ++ EAV+R
Sbjct: 489 GKTQLAKALAEVLFGSERALIRF-DMSEFQEPHSISKLIGAPPGYVGYEQGGRLTEAVRR 547
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
PFSV+LL++I++A + + ++ GRL D GR + VI I+T++
Sbjct: 548 QPFSVVLLDEIEKAHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTSN 598
>gi|153813279|ref|ZP_01965947.1| hypothetical protein RUMOBE_03696 [Ruminococcus obeum ATCC 29174]
gi|149830692|gb|EDM85783.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus obeum ATCC 29174]
Length = 708
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 20/180 (11%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L K L ++V Q+EA AVA V + ++G R GS LF+GP VGK +++
Sbjct: 398 LEKELHKRVIGQEEAVKAVAQAVKRGRVGLKDPNRPIGS-----FLFLGPTGVGKTELSK 452
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILL 735
AL+E V G+ MI + E+ V G D+ G E V+RNP+SV+L
Sbjct: 453 ALAEAVFGSEQAMIRVDMSEYMEKHSVSKMIGSPPGYVGYDEGGQLSEKVRRNPYSVLLF 512
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD------WLPDSLKFLSQ 789
++I++A V + + ++ G + D++GR++ I I+T++ P L F+SQ
Sbjct: 513 DEIEKAHPDVFNILLQVLDDGHITDAHGRKVDFKQTIIIMTSNVGAQAIIEPKKLGFMSQ 572
>gi|402828693|ref|ZP_10877578.1| ATP-dependent chaperone protein ClpB [Slackia sp. CM382]
gi|402285851|gb|EJU34331.1| ATP-dependent chaperone protein ClpB [Slackia sp. CM382]
Length = 891
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 14/169 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E+V Q EA AVA + + + G + R GS LF+GP VGK ++A AL+E
Sbjct: 571 LHERVIGQDEAVHAVAGAIRRNRAGLSDPNRPIGS-----FLFLGPTGVGKTELAKALAE 625
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDID 739
+ M+ + E+ V+ G D+ G EAV+R P++V+LL++I+
Sbjct: 626 YLFDTEKAMVRIDMSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRRPYTVVLLDEIE 685
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLS 788
+A V + + ++ GRL D GRE+S N I I+T++ S++ S
Sbjct: 686 KAHQDVFNVLLQVLDDGRLTDGQGREVSFKNAIIIMTSNVGSQSIREYS 734
>gi|405372515|ref|ZP_11027590.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Chondromyces
apiculatus DSM 436]
gi|397088089|gb|EJJ19086.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 843
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
D RL + L E+V EA + +A + + G RR GS LF+GP VG
Sbjct: 531 DSSRLLRLEQDLAERVIGHSEAVTRIAKVIRRNYAGFASRRPMGS-----FLFLGPTGVG 585
Query: 678 KKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGKTAL-------DKIGEAVKRNP 729
K +MA AL++++ G M+ L E+ V R+ G A ++ E V+R P
Sbjct: 586 KTEMARALADVLFGNRDAMVRLDMSEMSEQHGVSRLIGSPAGYVGFGEGGQLTEPVRRRP 645
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
SV++L++I++A V+ + + +E GRL D GR I N + ++T +
Sbjct: 646 SSVVVLDEIEKAHREVQMLLLQVLEEGRLTDGKGRHIDFSNTVIVMTTNL 695
>gi|261417579|ref|YP_003251261.1| ATPase AAA [Geobacillus sp. Y412MC61]
gi|319765237|ref|YP_004130738.1| ATPase AAA [Geobacillus sp. Y412MC52]
gi|261374036|gb|ACX76779.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC61]
gi|317110103|gb|ADU92595.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC52]
Length = 810
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 27/209 (12%)
Query: 589 VKDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
V+D +SS P +KL E++ ++L K L + L +V Q EA AVA
Sbjct: 473 VEDIAAVVSSWTGIPVSKLAETETERLLK---------LEEILHSRVVGQDEAVKAVAKA 523
Query: 647 VTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDH 705
V + + G +R GS +F+GP VGK ++A AL+E + G +I + ++
Sbjct: 524 VRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAEAMFGDEDALIRI-DMSEY 577
Query: 706 EEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERG 756
E R G ++ G E V+R P+SV+LL+++++A V + + +E G
Sbjct: 578 MEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDG 637
Query: 757 RLVDSYGREISLGNVIFILTADWLPDSLK 785
RL DS GR + N I I+T++ D+LK
Sbjct: 638 RLTDSKGRTVDFRNTIIIMTSNVGADALK 666
>gi|291520389|emb|CBK75610.1| C-terminal, D2-small domain, of ClpB protein./AAA domain (Cdc48
subfamily) [Butyrivibrio fibrisolvens 16/4]
Length = 505
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 96/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++ +L+K + L ++V Q+EA SAVA V + ++G K R
Sbjct: 184 PVAKLTEQESVKLRK---------IESVLHKRVIGQEEAVSAVARAVRRGRVGLKEKGRP 234
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ AL+E V G MI + E+ V G
Sbjct: 235 IGS-----FLFLGPTGVGKTEISKALAEAVFGTESSMIRVDMSEYMEKHSVSKMIGSPPG 289
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+RNP+SVIL ++I++A V + + ++ G + DS GR++ N
Sbjct: 290 YVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNVLLQILDDGHVTDSQGRKVDFKNT 349
Query: 772 IFILTAD 778
I I+T++
Sbjct: 350 IIIMTSN 356
>gi|403070669|ref|ZP_10912001.1| ATP-dependent Clp proteinase [Oceanobacillus sp. Ndiop]
Length = 713
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ + K L +L ++V Q EA + VA + + + G K R GS LF+GP V
Sbjct: 411 EQEKMKNLSDNLRKQVIGQDEAVNKVAKAIRRSRAGLKSKHRPIGS-----FLFVGPTGV 465
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++ L+E + G MI L E+ V G ++ E V+RN
Sbjct: 466 GKTELTKVLAEELFGTRENMIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTERVRRN 525
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S++LL++I++A V+ + ME G L DS+GR++S + I+T++
Sbjct: 526 PYSILLLDEIEKAHPDVQNMFLQIMEDGHLTDSHGRKVSFKETVIIMTSN 575
>gi|295426424|ref|ZP_06819074.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
amylolyticus DSM 11664]
gi|295063792|gb|EFG54750.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
amylolyticus DSM 11664]
Length = 687
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 42/233 (18%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
++ V P +P+ TD ++ K++E EKT+I PV D + + + +QL
Sbjct: 342 DQKVDPDKAPIITDKIM--DKIVE---EKTNI-PVGD-------------IQKQEENQL- 381
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K L L KV Q EA VA + + ++G N R GS LF+GP
Sbjct: 382 --------KNLASDLKSKVIGQDEAVDQVARAIRRNRIGFNKSGRPIGS-----FLFVGP 428
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAV 725
VGK ++A L++ + G+ MI E+ V G ++ E V
Sbjct: 429 TGVGKTELAKQLAKQMFGSEDAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTEQV 488
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ NP+S+ILL+++++A+ V + ++ GRL DS GR +S + I I+T++
Sbjct: 489 RHNPYSLILLDEVEKANPDVMNLFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 541
>gi|377573275|ref|ZP_09802342.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
gi|377538010|dbj|GAB47507.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
Length = 866
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 23/190 (12%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMA 682
RL ++L +V Q+EA AVA V + + G R GS LF+GP VGK ++A
Sbjct: 541 RLEETLHARVVGQEEAVDAVAEAVRRARAGLADPNRPIGS-----FLFLGPTGVGKTELA 595
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR------------VRGKTALDKIGEAVKRNPF 730
AL+E + G M+ R D E + R G ++ EAV+R P+
Sbjct: 596 RALAEALFGDEDRMV----RFDMSEFQERHTVSRLVGAPPGYVGYEDAGQLTEAVRRTPY 651
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQ- 789
+V+LL++I++A V + + ++ GRL D GR I N + I+T++ D + +Q
Sbjct: 652 TVVLLDEIEKAHPDVFNTLLQLLDAGRLTDGQGRTIDFSNTVVIMTSNVGADRILATAQA 711
Query: 790 GITLDEKKLT 799
G L+E + T
Sbjct: 712 GQPLEELRET 721
>gi|269216425|ref|ZP_06160279.1| ATP-dependent chaperone protein ClpB [Slackia exigua ATCC 700122]
gi|269129954|gb|EEZ61036.1| ATP-dependent chaperone protein ClpB [Slackia exigua ATCC 700122]
Length = 891
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 14/169 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E+V Q EA AVA + + + G + R GS LF+GP VGK ++A AL+E
Sbjct: 571 LHERVIGQDEAVHAVAGAIRRNRAGLSDPNRPIGS-----FLFLGPTGVGKTELAKALAE 625
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDID 739
+ M+ + E+ V+ G D+ G EAV+R P++V+LL++I+
Sbjct: 626 YLFDTEKAMVRIDMSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRRPYTVVLLDEIE 685
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLS 788
+A V + + ++ GRL D GRE+S N I I+T++ S++ S
Sbjct: 686 KAHQDVFNVLLQVLDDGRLTDGQGREVSFKNAIIIMTSNVGSQSIREYS 734
>gi|47094004|ref|ZP_00231737.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|47017630|gb|EAL08430.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
Length = 622
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 317 MKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 371
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 372 LGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 431
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 432 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 477
>gi|138893757|ref|YP_001124210.1| negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196251133|ref|ZP_03149812.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
gi|134265270|gb|ABO65465.1| Negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196209374|gb|EDY04154.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
Length = 811
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 27/209 (12%)
Query: 589 VKDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
V+D +SS P +KL E++ ++L K L + L +V Q EA AVA
Sbjct: 474 VEDIAAVVSSWTGIPVSKLAETETERLLK---------LEEILHARVVGQDEAVKAVAKA 524
Query: 647 VTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDH 705
V + + G +R GS +F+GP VGK ++A AL+E + G +I + ++
Sbjct: 525 VRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAEAMFGDEDALIRI-DMSEY 578
Query: 706 EEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERG 756
E R G ++ G E V+R P+SV+LL+++++A V + + +E G
Sbjct: 579 MEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDG 638
Query: 757 RLVDSYGREISLGNVIFILTADWLPDSLK 785
RL DS GR + N I I+T++ D+LK
Sbjct: 639 RLTDSKGRTVDFRNTIIIMTSNVGADALK 667
>gi|152988574|ref|YP_001345959.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PA7]
gi|452879079|ref|ZP_21956223.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa VRFPA01]
gi|150963732|gb|ABR85757.1| probable ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PA7]
gi|452184314|gb|EME11332.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa VRFPA01]
Length = 932
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
R+ + L ++V QQEA +AV+ V + G + GS+ LF+GP VGK ++A
Sbjct: 585 RMEERLHQRVIGQQEAITAVSDAVRLARAGLRQ----GSRPIATFLFLGPTGVGKTELAK 640
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
AL+E+V G MI + E V G ++ E V+R P+SVILL
Sbjct: 641 ALAEVVFGDEDAMIRIDMSEYMERHAVSRLIGAPPGYVGYEEGGQLTERVRRRPYSVILL 700
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPD 782
++I++A V + + + GRL D GR + N I I T++ D
Sbjct: 701 DEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD 747
>gi|225574400|ref|ZP_03783010.1| hypothetical protein RUMHYD_02469 [Blautia hydrogenotrophica DSM
10507]
gi|225038402|gb|EEG48648.1| ATPase family associated with various cellular activities (AAA)
[Blautia hydrogenotrophica DSM 10507]
Length = 827
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 14/164 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
RL K L +V Q+EA +AVA V + ++G R GS LF+GP VGK +++
Sbjct: 514 RLEKELHRRVIGQEEAVTAVAQAVKRGRVGLKDPARPIGS-----FLFLGPTGVGKTELS 568
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVIL 734
AL+E V G MI + E+ V G D+ G E V+RNP+SVIL
Sbjct: 569 KALAEAVFGTEQAMIRVDMSEYMEKHSVSKLIGSPPGYVGYDEGGQLSEKVRRNPYSVIL 628
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + ++ G + D+ GR+I I I+T++
Sbjct: 629 FDEIEKAHPDVFNILLQVLDDGHITDAQGRKIDFKQTIIIMTSN 672
>gi|16078434|ref|NP_389253.1| ATP-dependent Clp protease (class III stress gene) [Bacillus
subtilis subsp. subtilis str. 168]
gi|221309234|ref|ZP_03591081.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
subtilis subsp. subtilis str. 168]
gi|221313562|ref|ZP_03595367.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221318484|ref|ZP_03599778.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221322757|ref|ZP_03604051.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
subtilis subsp. subtilis str. SMY]
gi|402775607|ref|YP_006629551.1| ATP-dependent Clp protease [Bacillus subtilis QB928]
gi|81341923|sp|O31673.1|CLPE_BACSU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpE;
AltName: Full=ATPase ClpE; AltName: Full=Heat shock
protein HSP1
gi|2633741|emb|CAB13243.1| ATP-dependent Clp protease (class III stress gene) [Bacillus
subtilis subsp. subtilis str. 168]
gi|402480790|gb|AFQ57299.1| ATP-dependent Clp protease (class III stressgene) [Bacillus
subtilis QB928]
gi|407958768|dbj|BAM52008.1| ATP-dependent Clp protease [Bacillus subtilis BEST7613]
gi|407964346|dbj|BAM57585.1| ATP-dependent Clp protease [Bacillus subtilis BEST7003]
Length = 699
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L E+V Q+ A VA V + + G K R GS LF+GP VGK +
Sbjct: 400 MKELEAKLHERVIGQEAAVQKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGVGKTE 454
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L++ + G +I L E+ V G ++ E V+RNP+S+
Sbjct: 455 LSKTLADELFGTKDAIIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSI 514
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 515 VLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 560
>gi|254526796|ref|ZP_05138848.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
gi|221538220|gb|EEE40673.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
Length = 918
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L K L EKV Q++A V+ + + ++G +R GS LFMGP VGK ++A
Sbjct: 610 LEKELSEKVIGQEKAIETVSAAIRRARVGMKSPKRPIGS-----FLFMGPTGVGKTELAK 664
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
+L+ + ++ L E+ V G ++ EAV+R P+SVILL
Sbjct: 665 SLATALFDEEDALLRLDMSEYMEKNAVARLLGAPPGYIGYEEGGQLTEAVRRKPYSVILL 724
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGIT 792
++I++A V + + ++ GRL DS GR + N + I+T++ S+ SQ I+
Sbjct: 725 DEIEKAHTEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSNLAGKSILEYSQKIS 781
>gi|385331432|ref|YP_005885383.1| ATPase [Marinobacter adhaerens HP15]
gi|311694582|gb|ADP97455.1| ATPase AAA-2 domain protein [Marinobacter adhaerens HP15]
Length = 912
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 627 KSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALS 686
+ L ++V Q EA +AV+ V + G G RR + F+GP VGK ++ AL+
Sbjct: 602 QRLHQRVVGQDEAVTAVSDAVRLSRAGLGDRR----RPIATFFFLGPTGVGKTELTKALA 657
Query: 687 ELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDI 738
E V G MI + E V G ++ E V+R P+SV+LL++
Sbjct: 658 ETVFGDEEAMIRIDMSEYMERHTVARLIGAPPGYVGHEEGGQLTEKVRRKPYSVVLLDEF 717
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
++A M V+ + + E GRL D GR + N I I T++ D ++
Sbjct: 718 EKAHMDVQNVLLQVFEDGRLTDGKGRVVDFTNTIIIATSNIGSDVIR 764
>gi|338535434|ref|YP_004668768.1| ClpA/B family protein [Myxococcus fulvus HW-1]
gi|337261530|gb|AEI67690.1| ClpA/B family protein [Myxococcus fulvus HW-1]
Length = 843
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
D RL + L E+V EA + +A + + G RR GS LF+GP VG
Sbjct: 531 DSSRLLRLEQDLAERVIGHAEAVTRIARVIRRNYAGFASRRPMGS-----FLFLGPTGVG 585
Query: 678 KKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGKTAL-------DKIGEAVKRNP 729
K +MA AL++++ G M+ L E+ V R+ G A ++ E V+R P
Sbjct: 586 KTEMARALADVLFGNRDAMVRLDMSEMSEQHGVSRLIGSPAGYVGFGEGGQLTEPVRRRP 645
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
SV++L++I++A V+ + + +E GRL D GR I N + ++T +
Sbjct: 646 SSVVVLDEIEKAHREVQMLLLQVLEEGRLTDGKGRHIDFSNTVIVMTTNL 695
>gi|253579478|ref|ZP_04856747.1| ATPase AAA-2 domain-containing protein [Ruminococcus sp.
5_1_39B_FAA]
gi|251848979|gb|EES76940.1| ATPase AAA-2 domain-containing protein [Ruminococcus sp.
5_1_39BFAA]
Length = 820
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 32/212 (15%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + +L RL K L ++V Q EA AVA V + ++G R
Sbjct: 497 PLQKLTEGETKRLA---------RLEKELHKRVIGQNEAVKAVAQAVKRGRVGLKDPNRP 547
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ AL+E V G+ MI + E+ V
Sbjct: 548 IGS-----FLFLGPTGVGKTELSKALAEAVFGSEQAMIRVDMSEYMEKHSVSKLIGSPPG 602
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+SV+L ++I++A V + + ++ G + D+ GR++
Sbjct: 603 YVGYEEGGQLSEKVRRNPYSVLLFDEIEKAHPDVFNILLQVLDDGHITDAQGRKVDFKQT 662
Query: 772 IFILTAD------WLPDSLKFLSQGITLDEKK 797
I I+T++ P L F+S DEKK
Sbjct: 663 IIIMTSNAGAQAIMEPKRLGFMSDN---DEKK 691
>gi|418584972|ref|ZP_13149029.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa MPAO1/P1]
gi|418591722|ref|ZP_13155613.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa MPAO1/P2]
gi|421515076|ref|ZP_15961762.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PAO579]
gi|375045304|gb|EHS37890.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa MPAO1/P1]
gi|375049448|gb|EHS41944.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa MPAO1/P2]
gi|404348804|gb|EJZ75141.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PAO579]
Length = 932
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
S E+ +E + + + ++ P E + LQ + + L ++V QQE
Sbjct: 550 SKTEEVRVEDIAEIISKLTGIPVTELTAEEREKLLQ----------MEERLHQRVIGQQE 599
Query: 639 AASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
A +AV+ V + G + GS+ LF+GP VGK ++A AL+E+V G MI
Sbjct: 600 AITAVSDAVRLARAGLRQ----GSRPIATFLFLGPTGVGKTELAKALAEVVFGDEDAMIR 655
Query: 699 LGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIK 750
+ E V G D+ G E V+R P+SVILL++I++A V +
Sbjct: 656 IDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHADVNNILL 715
Query: 751 RAMERGRLVDSYGREISLGNVIFILTAD 778
+ + GRL D GR + N I I T++
Sbjct: 716 QVFDDGRLTDGKGRVVDFTNTIIIATSN 743
>gi|313111914|ref|ZP_07797704.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 39016]
gi|355646788|ref|ZP_09054623.1| hypothetical protein HMPREF1030_03709 [Pseudomonas sp. 2_1_26]
gi|386068630|ref|YP_005983934.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa NCGM2.S1]
gi|310884206|gb|EFQ42800.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 39016]
gi|348037189|dbj|BAK92549.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa NCGM2.S1]
gi|354828327|gb|EHF12450.1| hypothetical protein HMPREF1030_03709 [Pseudomonas sp. 2_1_26]
Length = 932
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
S E+ +E + + + ++ P E + LQ + + L ++V QQE
Sbjct: 550 SKTEEVRVEDIAEIISKLTGIPVTELTAEEREKLLQ----------MEERLHQRVIGQQE 599
Query: 639 AASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
A +AV+ V + G + GS+ LF+GP VGK ++A AL+E+V G MI
Sbjct: 600 AITAVSDAVRLARAGLRQ----GSRPIATFLFLGPTGVGKTELAKALAEVVFGDEDAMIR 655
Query: 699 LGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIK 750
+ E V G D+ G E V+R P+SVILL++I++A V +
Sbjct: 656 IDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHADVNNILL 715
Query: 751 RAMERGRLVDSYGREISLGNVIFILTAD 778
+ + GRL D GR + N I I T++
Sbjct: 716 QVFDDGRLTDGKGRVVDFTNTIIIATSN 743
>gi|149183498|ref|ZP_01861926.1| ClpC [Bacillus sp. SG-1]
gi|148848792|gb|EDL63014.1| ClpC [Bacillus sp. SG-1]
Length = 813
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 122/252 (48%), Gaps = 31/252 (12%)
Query: 549 VSSQPAERAVSPLNSPVRTDLVLGRSKVL---ESAPEKTHIEPVKDFLGCISS--EPPQN 603
V SQ E+A S ++ R L +K + E T + V+D +SS P +
Sbjct: 431 VQSQEFEKAASLRDTEQRLREELEDTKKTWKEKQGQENTEV-TVEDIAKVVSSWTGIPVS 489
Query: 604 KLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGS 662
KL +++ D+L K L + L +V Q EA AV+ V + + G +R GS
Sbjct: 490 KLAQTETDKLLK---------LEEILHSRVIGQDEAVKAVSKAVRRARAGLKDPKRPIGS 540
Query: 663 KGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKT 716
+F+GP VGK ++A AL+E + G MI + ++ E R G
Sbjct: 541 -----FVFLGPTGVGKTELARALAESMFGDEESMIRI-DMSEYMEKHSTSRLVGSPPGYV 594
Query: 717 ALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIF 773
++ G E V+R P+SV+LL++I++A V + + +E GRL DS GR + N +
Sbjct: 595 GYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVL 654
Query: 774 ILTADWLPDSLK 785
I+T++ +SLK
Sbjct: 655 IMTSNVGAESLK 666
>gi|163782453|ref|ZP_02177451.1| ATPase subunit of ATP-dependent protease [Hydrogenivirga sp.
128-5-R1-1]
gi|159882486|gb|EDP75992.1| ATPase subunit of ATP-dependent protease [Hydrogenivirga sp.
128-5-R1-1]
Length = 1002
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 197/488 (40%), Gaps = 116/488 (23%)
Query: 321 GRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAAKTP--------LSGMFPRLGSN- 371
G + +IG T + Y + P++E + PI P L G+ P+L +
Sbjct: 438 GEIRVIGATTVDEYRKYIEKDPALERRFQ----PIYVDEPSEEEAMEILKGLRPKLEQHH 493
Query: 372 --GILSSSVESLSPLKSAFQTTAAALPRRVSENLDPA---RRMSCCRQ--CLQNYEQELA 424
I ++E+ L + T LP + + LD A +++S +Q E++L
Sbjct: 494 KVKISDEAIEAAVKLTKRY-VTFRKLPDKAIDALDQASARKKLSVIGVPPEIQEVERKLK 552
Query: 425 KLSKEFEKSSSEVKSEVARPLLPQWLHNAKAHDGDDKTAEQTENKDQDLIWKQ-----KS 479
L +E K++ E E L Q KA Q E + Q+L K K
Sbjct: 553 ALDEEIMKANLEGDYEKEAQLKVQ-----KA---------QLEKEKQELTEKLGGLDIKV 598
Query: 480 QELQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQPFQPKVQLNRNLG 539
+EL+KK + L++ S +ER + + KV L + L
Sbjct: 599 KELKKKIEE--LDKEIMKAAESGDYEREAQLKIE-----------------KVNLEKEL- 638
Query: 540 DTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSE 599
+ SQ AE +LV+G V + E T I
Sbjct: 639 -------KALESQKAE------------ELVVGWDDVAQVVSEWTGI------------- 666
Query: 600 PPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRR 658
P +L E + ++L K D L ++V Q+ A AV+ + + + G +R
Sbjct: 667 -PVTRLKEEEMEKLLKLED---------ELHKRVVDQEHAVKAVSEAIRRARAGLKDPKR 716
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR------- 711
S LF+GP VGK +++ AL+EL+ G +I L EE V
Sbjct: 717 PIAS-----FLFLGPTGVGKTELSKALAELLFGEEDALIRLDMSEFKEEHSVAKLIGAPP 771
Query: 712 -VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G K+ EAV+R P+SVILL++I++A V + ++ GRL DS+GR + N
Sbjct: 772 GYVGYEEGGKLTEAVRRKPYSVILLDEIEKAHPRVFDLFLQVLDDGRLTDSHGRTVDFRN 831
Query: 771 VIFILTAD 778
+ I+T++
Sbjct: 832 TVIIMTSN 839
>gi|321315125|ref|YP_004207412.1| ATP-dependent Clp protease (class III stress protein) [Bacillus
subtilis BSn5]
gi|320021399|gb|ADV96385.1| ATP-dependent Clp protease (class III stress protein) [Bacillus
subtilis BSn5]
Length = 699
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L E+V Q+ A VA V + + G K R GS LF+GP VGK +
Sbjct: 400 MKELEAKLHERVIGQEAAVQKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGVGKTE 454
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L++ + G +I L E+ V G ++ E V+RNP+S+
Sbjct: 455 LSKTLADELFGTKDAIIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSI 514
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 515 VLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 560
>gi|296386957|ref|ZP_06876456.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PAb1]
gi|416874981|ref|ZP_11918474.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 152504]
gi|334842534|gb|EGM21140.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 152504]
Length = 932
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
S E+ +E + + + ++ P E + LQ + + L ++V QQE
Sbjct: 550 SKTEEVRVEDIAEIISKLTGIPVTELTAEEREKLLQ----------MEERLHQRVIGQQE 599
Query: 639 AASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
A +AV+ V + G + GS+ LF+GP VGK ++A AL+E+V G MI
Sbjct: 600 AITAVSDAVRLARAGLRQ----GSRPIATFLFLGPTGVGKTELAKALAEVVFGDEDAMIR 655
Query: 699 LGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIK 750
+ E V G D+ G E V+R P+SVILL++I++A V +
Sbjct: 656 IDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHADVNNILL 715
Query: 751 RAMERGRLVDSYGREISLGNVIFILTAD 778
+ + GRL D GR + N I I T++
Sbjct: 716 QVFDDGRLTDGKGRVVDFTNTIIIATSN 743
>gi|386758076|ref|YP_006231292.1| ATPase AAA-2 domain-containing protein [Bacillus sp. JS]
gi|384931358|gb|AFI28036.1| ATPase AAA-2 domain-containing protein [Bacillus sp. JS]
Length = 683
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L E+V Q+ A VA V + + G K R GS LF+GP VGK +
Sbjct: 384 MKELEAKLHERVIGQEAAVQEVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGVGKTE 438
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L++ + G +I L E+ V G ++ E V+RNP+S+
Sbjct: 439 LSKTLADELFGTKDAIIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSI 498
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 499 VLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 544
>gi|168187707|ref|ZP_02622342.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum C str. Eklund]
gi|169294451|gb|EDS76584.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum C str. Eklund]
Length = 813
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 23/190 (12%)
Query: 598 SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGK 656
S P KL E + D+L K L ++L ++V Q EA ++A V + ++G
Sbjct: 488 SNVPVEKLTEKEADRLLK---------LEETLHKRVIGQNEAVKSIARAVRRARVGLKDS 538
Query: 657 RRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR----- 711
+R GS +F+GP VGK +++ AL+E + G MI + E+ V
Sbjct: 539 KRPIGS-----FIFLGPTGVGKTELSKALAEAMFGDENNMIRIDMSEYMEKHAVSRLVGS 593
Query: 712 ---VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISL 768
G ++ E V+R+P+SVIL ++I++A V + + +E GRL DS G+ ++
Sbjct: 594 PPGYIGHDEGGQLTEQVRRHPYSVILFDEIEKAHPEVFNILLQILEDGRLTDSKGKTVNF 653
Query: 769 GNVIFILTAD 778
N I ILT++
Sbjct: 654 KNTIIILTSN 663
>gi|402297897|ref|ZP_10817634.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Bacillus
alcalophilus ATCC 27647]
gi|401726867|gb|EJT00077.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Bacillus
alcalophilus ATCC 27647]
Length = 718
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L EKV Q EA VA + + + G K R GS LF+GP VGK +
Sbjct: 418 MKNLAPRLAEKVIGQVEAVEKVAKAIRRSRAGLKAKHRPIGS-----FLFVGPTGVGKTE 472
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+E + G+ MI L E+ V G ++ E V+R P+S+
Sbjct: 473 LTKTLAEELFGSKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRKPYSI 532
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E G L DS GR++S + + I+T++
Sbjct: 533 ILLDEIEKAHPDVQHMFLQILEDGHLTDSQGRKVSFKDTVIIMTSN 578
>gi|392981869|ref|YP_006480456.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa DK2]
gi|419755939|ref|ZP_14282291.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PADK2_CF510]
gi|451987573|ref|ZP_21935728.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Pseudomonas
aeruginosa 18A]
gi|384397601|gb|EIE44012.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PADK2_CF510]
gi|392317374|gb|AFM62754.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa DK2]
gi|451754723|emb|CCQ88251.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Pseudomonas
aeruginosa 18A]
Length = 932
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
S E+ +E + + + ++ P E + LQ + + L ++V QQE
Sbjct: 550 SKTEEVRVEDIAEIISRLTGIPVTELTAEEREKLLQ----------MEERLHQRVIGQQE 599
Query: 639 AASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
A +AV+ V + G + GS+ LF+GP VGK ++A AL+E+V G MI
Sbjct: 600 AITAVSDAVRLARAGLRQ----GSRPIATFLFLGPTGVGKTELAKALAEVVFGDEDAMIR 655
Query: 699 LGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIK 750
+ E V G D+ G E V+R P+SVILL++I++A V +
Sbjct: 656 IDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHADVNNILL 715
Query: 751 RAMERGRLVDSYGREISLGNVIFILTAD 778
+ + GRL D GR + N I I T++
Sbjct: 716 QVFDDGRLTDGKGRVVDFTNTIIIATSN 743
>gi|386056527|ref|YP_005973049.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa M18]
gi|347302833|gb|AEO72947.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa M18]
Length = 932
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
S E+ +E + + + ++ P E + LQ + + L ++V QQE
Sbjct: 550 SKTEEVRVEDIAEIISRLTGIPVTELTAEEREKLLQ----------MEERLHQRVIGQQE 599
Query: 639 AASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
A +AV+ V + G + GS+ LF+GP VGK ++A AL+E+V G MI
Sbjct: 600 AITAVSDAVRLARAGLRQ----GSRPIATFLFLGPTGVGKTELAKALAEVVFGDEDAMIR 655
Query: 699 LGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIK 750
+ E V G D+ G E V+R P+SVILL++I++A V +
Sbjct: 656 IDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHADVNNILL 715
Query: 751 RAMERGRLVDSYGREISLGNVIFILTAD 778
+ + GRL D GR + N I I T++
Sbjct: 716 QVFDDGRLTDGKGRVVDFTNTIIIATSN 743
>gi|421165326|ref|ZP_15623661.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa ATCC
700888]
gi|404542185|gb|EKA51515.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa ATCC
700888]
Length = 850
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
S E+ +E + + + ++ P E + LQ + + L ++V QQE
Sbjct: 468 SKTEEVRVEDIAEIISKLTGIPVTELTAEEREKLLQ----------MEERLHQRVIGQQE 517
Query: 639 AASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
A +AV+ V + G + GS+ LF+GP VGK ++A AL+E+V G MI
Sbjct: 518 AITAVSDAVRLARAGLRQ----GSRPIATFLFLGPTGVGKTELAKALAEVVFGDEDAMIR 573
Query: 699 LGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIK 750
+ E V G D+ G E V+R P+SVILL++I++A V +
Sbjct: 574 IDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHADVNNILL 633
Query: 751 RAMERGRLVDSYGREISLGNVIFILTAD 778
+ + GRL D GR + N I I T++
Sbjct: 634 QVFDDGRLTDGKGRVVDFTNTIIIATSN 661
>gi|416856307|ref|ZP_11911951.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 138244]
gi|334842182|gb|EGM20795.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 138244]
gi|453045838|gb|EME93556.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa
PA21_ST175]
Length = 932
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
S E+ +E + + + ++ P E + LQ + + L ++V QQE
Sbjct: 550 SKTEEVRVEDIAEIISRLTGIPVTELTAEEREKLLQ----------MEERLHQRVIGQQE 599
Query: 639 AASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
A +AV+ V + G + GS+ LF+GP VGK ++A AL+E+V G MI
Sbjct: 600 AITAVSDAVRLARAGLRQ----GSRPIATFLFLGPTGVGKTELAKALAEVVFGDEDAMIR 655
Query: 699 LGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIK 750
+ E V G D+ G E V+R P+SVILL++I++A V +
Sbjct: 656 IDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHADVNNILL 715
Query: 751 RAMERGRLVDSYGREISLGNVIFILTAD 778
+ + GRL D GR + N I I T++
Sbjct: 716 QVFDDGRLTDGKGRVVDFTNTIIIATSN 743
>gi|389844868|ref|YP_006346948.1| chaperone ATPase [Mesotoga prima MesG1.Ag.4.2]
gi|387859614|gb|AFK07705.1| ATPase with chaperone activity, ATP-binding subunit [Mesotoga prima
MesG1.Ag.4.2]
Length = 794
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 28/223 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRR 658
P K+ +S+ ++L R L+S++ EK Q+EA V+ T+ + + G N +
Sbjct: 484 PAGKMLQSEREKL----------RDLESIIHEKFVDQEEAVKIVSQTIRRARAGLNAAHK 533
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR------- 711
GS LFMGP VGK ++A L+ ++ G+ M+ + E+ V
Sbjct: 534 PWGS-----FLFMGPTGVGKTELAKRLAFILFGSEEAMVRIDMSEYMEKHTVSRLIGAPP 588
Query: 712 -VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ EAV+R P+SV+LL++I++A V + + M+ GRL D G+ +S N
Sbjct: 589 GYVGYEEGGQLTEAVRRRPYSVVLLDEIEKAHREVHSVLLQIMDDGRLTDGKGKTVSFSN 648
Query: 771 VIFILTADWLPDSLKF---LSQGITLDEKKLTSLASGEWQLRL 810
I I+T++ + L LS+ + L E+ L E+ RL
Sbjct: 649 TIIIMTSNIASEELASTSELSRAMDLAEESLRKAFRPEFINRL 691
>gi|107099444|ref|ZP_01363362.1| hypothetical protein PaerPA_01000456 [Pseudomonas aeruginosa PACS2]
gi|424943121|ref|ZP_18358884.1| probable ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa NCMG1179]
gi|346059567|dbj|GAA19450.1| probable ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa NCMG1179]
Length = 932
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
S E+ +E + + + ++ P E + LQ + + L ++V QQE
Sbjct: 550 SKTEEVRVEDIAEIISRLTGIPVTELTAEEREKLLQ----------MEERLHQRVIGQQE 599
Query: 639 AASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
A +AV+ V + G + GS+ LF+GP VGK ++A AL+E+V G MI
Sbjct: 600 AITAVSDAVRLARAGLRQ----GSRPIATFLFLGPTGVGKTELAKALAEVVFGDEDAMIR 655
Query: 699 LGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIK 750
+ E V G D+ G E V+R P+SVILL++I++A V +
Sbjct: 656 IDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHADVNNILL 715
Query: 751 RAMERGRLVDSYGREISLGNVIFILTAD 778
+ + GRL D GR + N I I T++
Sbjct: 716 QVFDDGRLTDGKGRVVDFTNTIIIATSN 743
>gi|15606774|ref|NP_214154.1| ATPase subunit of ATP-dependent protease [Aquifex aeolicus VF5]
gi|54035745|sp|O67588.1|CLPB_AQUAE RecName: Full=Chaperone protein ClpB
gi|2984005|gb|AAC07550.1| ATPase subunit of ATP-dependent protease [Aquifex aeolicus VF5]
Length = 1006
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 617 LDPDSFKRLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
L + ++LLK L ++V Q+ A AVA + + + G +R S LF+G
Sbjct: 672 LKEEEMQKLLKLEDELHKRVVDQEHAVKAVAEAIRRARAGLKDPKRPIAS-----FLFLG 726
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEA 724
P VGK +++ AL+EL+ G +I L EE V G K+ EA
Sbjct: 727 PTGVGKTELSKALAELLFGDEDALIRLDMSEFKEEHSVAKLIGAPPGYVGYEEGGKLTEA 786
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V+R P+SVILL++I++A V + ++ GRL DS+GR + N + I+T++
Sbjct: 787 VRRKPYSVILLDEIEKAHPRVLDLFLQVLDDGRLTDSHGRTVDFRNTVIIMTSN 840
>gi|410658561|ref|YP_006910932.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. DCA]
gi|410661548|ref|YP_006913919.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. CF]
gi|409020916|gb|AFV02947.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. DCA]
gi|409023904|gb|AFV05934.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. CF]
Length = 827
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 27/215 (12%)
Query: 590 KDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLM-EKVWWQQEAASAVATT 646
+D G +SS P NKL E ++ +L K L+SL+ E V Q EA +AVA +
Sbjct: 481 EDISGIVSSWTGVPVNKLEEGESFRLLK----------LESLLHESVIGQDEAVTAVARS 530
Query: 647 VTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDH 705
+ + + G +R GS +F+GP VGK ++A +L+E + G +I +
Sbjct: 531 IRRARAGLKDPKRPIGS-----FIFLGPTGVGKTQLARSLAESLFGDENSLIRVDMSEYM 585
Query: 706 EEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGR 757
E+ V G D+ G EAV+R P+SVIL ++I++A V + + +E GR
Sbjct: 586 EKHAVSRMVGSPPGYVGHDEGGQLTEAVRRKPYSVILFDEIEKAHPEVFNILLQVLEDGR 645
Query: 758 LVDSYGREISLGNVIFILTADWLPDSLKFLSQGIT 792
L DS GR + N + I+T++ LK S G
Sbjct: 646 LTDSKGRLVDFRNCVLIMTSNVGASFLKKESLGFV 680
>gi|406666957|ref|ZP_11074720.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
gi|405385240|gb|EKB44676.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
Length = 814
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 16/172 (9%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L + L ++V Q EA A++ + + + G +R GS +F+GP VGK ++A
Sbjct: 504 LEEELHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELAR 558
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVIL 734
AL+E++ G MI + ++ E R G D G E V+R P+SV+L
Sbjct: 559 ALAEVMFGDEDAMIRV-DMSEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVVL 617
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKF 786
L++I++A V + + +E GRL DS GR + N + I+T++ D+LK+
Sbjct: 618 LDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADALKY 669
>gi|420156532|ref|ZP_14663374.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
MSTE9]
gi|394757462|gb|EJF40494.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
MSTE9]
Length = 821
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 22/200 (11%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L ++L +++ Q+EA SAV+ + + ++G +R GS +F+GP VGK ++
Sbjct: 511 LEETLHQRLVGQEEAVSAVSRAIRRGRVGLKDPKRPVGS-----FIFLGPTGVGKTELTK 565
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVILL 735
AL+E + G MI L E+ V R+ G D+ G EAV+R P+SV+L
Sbjct: 566 ALAEAMFGDENAMIRLDMSEYMEKHTVSRLVGSPPGYVGYDEGGQLTEAVRRKPYSVVLF 625
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW-------LPDSLKFLS 788
++I++A V + + +E GRL D+ GR++ N + I+T++ SL F S
Sbjct: 626 DEIEKAHPDVFNILLQILEDGRLTDAQGRKVDFKNTVIIMTSNVGARLITEKKGSLGFAS 685
Query: 789 -QGITLDEKKLTSLASGEWQ 807
+ LD +K+ L GE +
Sbjct: 686 EENQKLDSEKVKELVLGELK 705
>gi|15595656|ref|NP_249150.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa PAO1]
gi|9946319|gb|AAG03848.1|AE004483_6 probable ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PAO1]
Length = 850
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
S E+ +E + + + ++ P E + LQ + + L ++V QQE
Sbjct: 468 SKTEEVRVEDIAEIISKLTGIPVTELTAEEREKLLQ----------MEERLHQRVIGQQE 517
Query: 639 AASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
A +AV+ V + G + GS+ LF+GP VGK ++A AL+E+V G MI
Sbjct: 518 AITAVSDAVRLARAGLRQ----GSRPIATFLFLGPTGVGKTELAKALAEVVFGDEDAMIR 573
Query: 699 LGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIK 750
+ E V G D+ G E V+R P+SVILL++I++A V +
Sbjct: 574 IDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHADVNNILL 633
Query: 751 RAMERGRLVDSYGREISLGNVIFILTAD 778
+ + GRL D GR + N I I T++
Sbjct: 634 QVFDDGRLTDGKGRVVDFTNTIIIATSN 661
>gi|393198912|ref|YP_006460754.1| chaperone ATPase [Solibacillus silvestris StLB046]
gi|327438243|dbj|BAK14608.1| ATPase with chaperone activity, ATP-binding subunit [Solibacillus
silvestris StLB046]
Length = 814
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 16/172 (9%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L + L ++V Q EA A++ + + + G +R GS +F+GP VGK ++A
Sbjct: 504 LEEELHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELAR 558
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVIL 734
AL+E++ G MI + ++ E R G D G E V+R P+SV+L
Sbjct: 559 ALAEVMFGDEDAMIRV-DMSEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVVL 617
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKF 786
L++I++A V + + +E GRL DS GR + N + I+T++ D+LK+
Sbjct: 618 LDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADALKY 669
>gi|242620119|ref|YP_003002123.1| ATP-dependent clp protease ATP-binding subunit [Aureococcus
anophagefferens]
gi|239997364|gb|ACS36887.1| ATP-dependent clp protease ATP-binding subunit [Aureococcus
anophagefferens]
Length = 846
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 34/264 (12%)
Query: 534 LNRNLGDTLQLNSNMVSSQPAERAVSPLNSPV----RTDLVLGRSKVLESAPEKTHIEPV 589
L R L D ++ + Q ERA L+ + + +++L K + + E + + V
Sbjct: 418 LKRELRDVMKEKEAAIREQDFERAADILDREIEIRAQLNIILSTIKRVSTPTETSTYDSV 477
Query: 590 ---KDFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVA 644
+D G ++ + P NKL ++++++L D +L ++ Q++A SAV+
Sbjct: 478 VCEEDIAGVVAAWTGIPVNKLSKTESEKLLLMED---------TLHSRIIGQEQAVSAVS 528
Query: 645 TTVTQCKLG--NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPR 702
+ + ++G N R A +F GP VGK ++ AL+ GA M+ L
Sbjct: 529 RAIRRARVGLRNPNRPIAS------FMFSGPTGVGKTELTKALALYFFGAEDSMVRLDMS 582
Query: 703 RDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAME 754
E V G + ++ EAV+R P++V+L ++I++A V + + +E
Sbjct: 583 EYMERHTVAKLIGSPPGYVGYSEGGQLTEAVRRKPYTVVLFDEIEKAHPDVFNLLLQILE 642
Query: 755 RGRLVDSYGREISLGNVIFILTAD 778
GRL DS GR I N + ILT++
Sbjct: 643 DGRLTDSKGRTIDFKNTMIILTSN 666
>gi|346308887|ref|ZP_08850991.1| hypothetical protein HMPREF9457_02700 [Dorea formicigenerans
4_6_53AFAA]
gi|345901436|gb|EGX71235.1| hypothetical protein HMPREF9457_02700 [Dorea formicigenerans
4_6_53AFAA]
Length = 776
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL ES+ +LQK L ++L ++V Q+EA +AVA V + ++G +R
Sbjct: 452 PVQKLQESEGARLQK---------LEQTLHKRVVGQEEAVTAVAKAVRRGRVGLKDPKRP 502
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ ALSE + MI + E+ V
Sbjct: 503 IGS-----FLFLGPTGVGKTELSKALSEALFHDENAMIRVDMSEYMEQHSVAKMIGSPPG 557
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R+P+SVIL ++I++A V + + ++ G + DS GR++ N
Sbjct: 558 YVGHEEGGQLSEQVRRHPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNT 617
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 618 VIIMTSN 624
>gi|294495078|ref|YP_003541571.1| ATP-dependent chaperone ClpB [Methanohalophilus mahii DSM 5219]
gi|292666077|gb|ADE35926.1| ATP-dependent chaperone ClpB [Methanohalophilus mahii DSM 5219]
Length = 869
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + D+L L L E+V Q EA AV+ V + G RR
Sbjct: 551 PITKLMEGERDKLV---------HLEDRLHERVIGQDEAVKAVSDAVIRAHAGIKDPRRP 601
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A AL+ + + MI + ++ E R
Sbjct: 602 IGS-----FIFLGPTGVGKTELAKALATELFDSEDHMIRI-DMSEYMEKHTVARLIGAPP 655
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+RNP+SV+L ++I++A V + + ++ GRL DS GR + N
Sbjct: 656 GYIGHDEGGQLTEAVRRNPYSVVLFDEIEKAHHDVFNIMLQLLDDGRLTDSKGRTVDFKN 715
Query: 771 VIFILTADWLPD-SLKFLSQGITLDEKKLTSL 801
I I+T++ D ++ L +G+ + + T++
Sbjct: 716 TIVIMTSNICVDYAISKLEEGVAYSKMQETAM 747
>gi|254237311|ref|ZP_04930634.1| hypothetical protein PACG_03381 [Pseudomonas aeruginosa C3719]
gi|126169242|gb|EAZ54753.1| hypothetical protein PACG_03381 [Pseudomonas aeruginosa C3719]
Length = 850
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
S E+ +E + + + ++ P E + LQ + + L ++V QQE
Sbjct: 468 SKTEEVRVEDIAEIISRLTGIPVTELTAEEREKLLQ----------MEERLHQRVIGQQE 517
Query: 639 AASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
A +AV+ V + G + GS+ LF+GP VGK ++A AL+E+V G MI
Sbjct: 518 AITAVSDAVRLARAGLRQ----GSRPIATFLFLGPTGVGKTELAKALAEVVFGDEDAMIR 573
Query: 699 LGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIK 750
+ E V G D+ G E V+R P+SVILL++I++A V +
Sbjct: 574 IDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHADVNNILL 633
Query: 751 RAMERGRLVDSYGREISLGNVIFILTAD 778
+ + GRL D GR + N I I T++
Sbjct: 634 QVFDDGRLTDGKGRVVDFTNTIIIATSN 661
>gi|384208114|ref|YP_005593834.1| hemolysin B ATP-binding subunit [Brachyspira intermedia PWS/A]
gi|343385764|gb|AEM21254.1| hemolysin B ATP-binding subunit [Brachyspira intermedia PWS/A]
Length = 828
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 595 CISSEPPQNKLHESQNDQLQKPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCK 651
I + ++ + E N +++ L+ +S KRL+ + L +KV Q+EA S+++ + + +
Sbjct: 479 FIEEDDIRHVISEITNIPIKRLLNSES-KRLIGMEEELHQKVVGQKEAISSISKAIRRSR 537
Query: 652 LG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV 710
G +R GS +F+GP VGK +A LSE + G S +I + E+ V
Sbjct: 538 AGLKTSKRPLGS-----FIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAV 592
Query: 711 -RVRG-------KTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSY 762
R+ G + E V+R P+S+IL ++I++A V + + +E G+L D++
Sbjct: 593 SRLIGAPPGYVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNF 652
Query: 763 GREISLGNVIFILTADW 779
GR++ N I I+T++
Sbjct: 653 GRKVDFSNTIIIITSNL 669
>gi|332686371|ref|YP_004456145.1| ClpB protein [Melissococcus plutonius ATCC 35311]
gi|332370380|dbj|BAK21336.1| ClpB protein [Melissococcus plutonius ATCC 35311]
Length = 868
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 26/205 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L + V Q EA A++ V + + G R
Sbjct: 550 PITKLVEGEREKLIK---------LNETLHQSVMGQNEAVDALSDAVIRARAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKHHVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP+++IL ++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIILFDEIEKAHSDVFNLLLQVLDDGRLTDSMGRIVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLDEK 796
+ I+T++ +FL +G+T D K
Sbjct: 716 VLIMTSNI---GSQFLLEGVTSDGK 737
>gi|257055183|ref|YP_003133015.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora viridis DSM 43017]
gi|256585055|gb|ACU96188.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora viridis DSM 43017]
Length = 846
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +V Q EA SAVA V + + G + R +GS LF+GP VGK ++A AL+E
Sbjct: 536 LHGRVVGQDEAVSAVAEAVRRARTGLAEPDRPSGS-----FLFLGPTGVGKTELARALAE 590
Query: 688 LVSGASPIMIPL-----GPRRDHEEPEVRVRGKTALDKIG---EAVKRNPFSVILLEDID 739
+ G+ M+ L G R G ++ G EAV+R P+SVILL++I+
Sbjct: 591 ALFGSEDHMVRLDMSEYGERHTASRLVGAPPGYVGYEEAGQLTEAVRRKPYSVILLDEIE 650
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V + + M+ GRL D GR ++ N + I+T++
Sbjct: 651 KAHPDVFNLLLQVMDDGRLTDGRGRTVNFTNTVLIMTSN 689
>gi|225620154|ref|YP_002721411.1| hemolysin B [Brachyspira hyodysenteriae WA1]
gi|225214973|gb|ACN83707.1| hemolysin B; ClpA, ATPases with chaperone activity, ATP-binding
subunit [Brachyspira hyodysenteriae WA1]
Length = 828
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 595 CISSEPPQNKLHESQNDQLQKPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCK 651
I + ++ + E N +++ L+ +S KRL+ + L +KV Q+EA S+++ + + +
Sbjct: 479 FIEEDDIRHVISEITNIPIKRLLNSES-KRLIGMEEELHQKVVGQKEAISSISKAIRRSR 537
Query: 652 LG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV 710
G +R GS +F+GP VGK +A LSE + G S +I + E+ V
Sbjct: 538 AGLKTSKRPLGS-----FIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAV 592
Query: 711 -RVRG-------KTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSY 762
R+ G + E V+R P+S+IL ++I++A V + + +E G+L D++
Sbjct: 593 SRLIGAPPGYVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNF 652
Query: 763 GREISLGNVIFILTADW 779
GR++ N I I+T++
Sbjct: 653 GRKVDFSNTIIIITSNL 669
>gi|157376705|ref|YP_001475305.1| chaperone endopeptidase Clp ATP-binding chain B,ClpB [Shewanella
sediminis HAW-EB3]
gi|157319079|gb|ABV38177.1| chaperone endopeptidase Clp ATP-binding chain B,ClpB [Shewanella
sediminis HAW-EB3]
Length = 820
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 14/165 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +++ QQ+A SAVA + + + G N R GS LF+GP VGK ++A AL+E
Sbjct: 512 LHKRIIGQQDAVSAVANAIRRNRTGINRSHRPIGS-----FLFLGPTGVGKTELAKALAE 566
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ ++ L E EV G ++ E V+RNP+++ILL++++
Sbjct: 567 FMLDDESRIVRLDMSEYMERHEVSKMIGAPPGYIGYGEGGQLTEKVRRNPYTIILLDEME 626
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
+A V + + +E GRL D+ GR IS N + I T++ +SL
Sbjct: 627 KAHPDVFNMLLQILEDGRLTDAQGRTISFRNTLLIGTSNLGSESL 671
>gi|218889199|ref|YP_002438063.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa LESB58]
gi|218769422|emb|CAW25182.1| probable ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa LESB58]
Length = 850
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
S E+ +E + + + ++ P E + LQ + + L ++V QQE
Sbjct: 468 SKTEEVRVEDIAEIISKLTGIPVTELTAEEREKLLQ----------MEERLHQRVIGQQE 517
Query: 639 AASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
A +AV+ V + G + GS+ LF+GP VGK ++A AL+E+V G MI
Sbjct: 518 AITAVSDAVRLARAGLRQ----GSRPIATFLFLGPTGVGKTELAKALAEVVFGDEDAMIR 573
Query: 699 LGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIK 750
+ E V G D+ G E V+R P+SVILL++I++A V +
Sbjct: 574 IDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHADVNNILL 633
Query: 751 RAMERGRLVDSYGREISLGNVIFILTAD 778
+ + GRL D GR + N I I T++
Sbjct: 634 QVFDDGRLTDGKGRVVDFTNTIIIATSN 661
>gi|297618415|ref|YP_003703574.1| ATPase AAA [Syntrophothermus lipocalidus DSM 12680]
gi|297146252|gb|ADI03009.1| ATPase AAA-2 domain protein [Syntrophothermus lipocalidus DSM
12680]
Length = 830
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 16/172 (9%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
+L + L ++V Q EA AVA V + + G +R GS +F+GP VGK ++A
Sbjct: 524 KLEEILHQRVIGQDEAVKAVAQAVRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELA 578
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVI 733
AL+E + G+ +I L ++ E R G D+ G E V+R P+SVI
Sbjct: 579 RALAEALFGSEEALIRL-DMSEYMEKHAVARMIGSPPGYVGYDEGGQLTEKVRRKPYSVI 637
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
LL++I++A V + + +E GRL D GR + N + I+T++ D+++
Sbjct: 638 LLDEIEKAHPDVYNILLQVLEDGRLTDGKGRTVDFRNTVVIMTSNVGADTIR 689
>gi|389842947|ref|YP_006345027.1| chaperone ATPase [Mesotoga prima MesG1.Ag.4.2]
gi|387857693|gb|AFK05784.1| ATPase with chaperone activity, ATP-binding subunit [Mesotoga prima
MesG1.Ag.4.2]
Length = 829
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 31/191 (16%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E+ +++L L +L E++ Q EA SAVA ++ + + G RR
Sbjct: 497 PLRKLEETDSEKLLT---------LENALHERIVSQDEAISAVAKSIRRARSGLKDPRRP 547
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
G+ LF+GP VGK ++A AL+E + G ++ R D E R
Sbjct: 548 IGT-----FLFLGPTGVGKTELAKALAEYLFGDDKALV----RFDMSEYMERFSVSRLIG 598
Query: 714 ---GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREIS 767
G D+ G E +++ PFSVIL ++I++A + + + M+ GRL DS GR++
Sbjct: 599 APPGYVGYDEGGTLTERIRKRPFSVILFDEIEKAHPDIFNILLQIMDDGRLTDSQGRQVD 658
Query: 768 LGNVIFILTAD 778
N I I+T++
Sbjct: 659 FRNTIVIMTSN 669
>gi|88770803|gb|ABD52004.1| ClpB [Methanohalophilus portucalensis FDF-1]
Length = 869
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E+V Q EA AV+ V + + G RR GS +F+GP VGK ++A AL+
Sbjct: 570 LHERVIGQNEAVKAVSDAVIRAQAGIKDPRRPIGS-----FIFLGPTGVGKTELAKALAT 624
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRNPFSVILLEDID 739
+ + MI + E+ V L IG EAV+RNP+SV+L ++I+
Sbjct: 625 ELFDSEDHMIRVDMSEYMEKHTVARLIGAPLGYIGHDEGGQLTEAVRRNPYSVVLFDEIE 684
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPD-SLKFLSQGITLDEKKL 798
+A V + + ++ GRL DS GR + N I I+T++ D ++ L +G+ + +
Sbjct: 685 KAHHDVFNIMLQLLDDGRLTDSKGRTVDFKNTIVIMTSNICVDYAISKLEEGVAYSKMQE 744
Query: 799 TSL 801
T++
Sbjct: 745 TAM 747
>gi|116054188|ref|YP_788632.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa
UCBPP-PA14]
gi|421172222|ref|ZP_15629998.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa CI27]
gi|115589409|gb|ABJ15424.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa UCBPP-PA14]
gi|404538083|gb|EKA47640.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa CI27]
Length = 850
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
S E+ +E + + + ++ P E + LQ + + L ++V QQE
Sbjct: 468 SKTEEVRVEDIAEIISKLTGIPVTELTAEEREKLLQ----------MEERLHQRVIGQQE 517
Query: 639 AASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
A +AV+ V + G + GS+ LF+GP VGK ++A AL+E+V G MI
Sbjct: 518 AITAVSDAVRLARAGLRQ----GSRPIATFLFLGPTGVGKTELAKALAEVVFGDEDAMIR 573
Query: 699 LGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIK 750
+ E V G D+ G E V+R P+SVILL++I++A V +
Sbjct: 574 IDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHADVNNILL 633
Query: 751 RAMERGRLVDSYGREISLGNVIFILTAD 778
+ + GRL D GR + N I I T++
Sbjct: 634 QVFDDGRLTDGKGRVVDFTNTIIIATSN 661
>gi|3913865|sp|Q54316.1|HLYB_TREHY RecName: Full=Hemolysin B
gi|511145|emb|CAA51655.1| hemolysin [Brachyspira hyodysenteriae]
Length = 828
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 595 CISSEPPQNKLHESQNDQLQKPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCK 651
I + ++ + E N +++ L+ +S KRL+ + L +KV Q+EA S+++ + + +
Sbjct: 479 FIEEDDIRHVISEITNIPIKRLLNSES-KRLIGMEEELHQKVVGQKEAISSISKAIRRSR 537
Query: 652 LG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV 710
G +R GS +F+GP VGK +A LSE + G S +I + E+ V
Sbjct: 538 AGLKTSKRPLGS-----FIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAV 592
Query: 711 -RVRG-------KTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSY 762
R+ G + E V+R P+S+IL ++I++A V + + +E G+L D++
Sbjct: 593 SRLIGAPPGYVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNF 652
Query: 763 GREISLGNVIFILTADW 779
GR++ N I I+T++
Sbjct: 653 GRKVDFSNTIIIITSNL 669
>gi|445062710|ref|ZP_21375048.1| hemolysin B ATP-binding subunit [Brachyspira hampsonii 30599]
gi|444505897|gb|ELV06321.1| hemolysin B ATP-binding subunit [Brachyspira hampsonii 30599]
Length = 828
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 595 CISSEPPQNKLHESQNDQLQKPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCK 651
I + ++ + E N +++ L+ +S KRL+ + L +KV Q+EA S+++ + + +
Sbjct: 479 FIEEDDIRHVISEITNIPIKRLLNSES-KRLIGMEEELHQKVVGQEEAISSISKAIRRSR 537
Query: 652 LG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV 710
G +R GS +F+GP VGK +A LSE + G S +I + E+ V
Sbjct: 538 AGLKTSKRPLGS-----FIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAV 592
Query: 711 -RVRG-------KTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSY 762
R+ G + E V+R P+S+IL ++I++A V + + +E G+L D++
Sbjct: 593 SRLIGAPPGYVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNF 652
Query: 763 GREISLGNVIFILTADW 779
GR++ N I I+T++
Sbjct: 653 GRKVDFSNTIIIITSNL 669
>gi|118444397|ref|YP_877171.1| negative regulator of genetic competence clpC/mecB [Clostridium
novyi NT]
gi|118134853|gb|ABK61897.1| Negative regulator of genetic competence clpC/mecB [Clostridium
novyi NT]
Length = 813
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 23/190 (12%)
Query: 598 SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGK 656
S P KL E + D+L K L ++L ++V Q EA ++A V + ++G
Sbjct: 488 SNVPVEKLTEKEADRLLK---------LEETLHKRVIGQNEAVKSIARAVRRARVGLKDS 538
Query: 657 RRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR----- 711
+R GS +F+GP VGK +++ AL+E + G MI + E+ V
Sbjct: 539 KRPIGS-----FIFLGPTGVGKTELSKALAEAMFGDENNMIRIDMSEYMEKHAVSRLVGS 593
Query: 712 ---VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISL 768
G ++ E V+R+P+SVIL ++I++A V + + +E GRL DS G+ +
Sbjct: 594 PPGYVGHDEGGQLTEQVRRHPYSVILFDEIEKAHPEVFNILLQILEDGRLTDSKGKTVDF 653
Query: 769 GNVIFILTAD 778
N I ILT++
Sbjct: 654 KNTIIILTSN 663
>gi|17229814|ref|NP_486362.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
gi|54035877|sp|Q8YUL9.1|CLPB1_ANASP RecName: Full=Chaperone protein ClpB 1
gi|17131414|dbj|BAB74021.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
Length = 880
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ QK L +S L ++V QQEA AV+ + + + G R
Sbjct: 556 PVNRLLESER---QKLLQLES------HLHQRVIGQQEAVEAVSAAIRRARAGMKDPNRP 606
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LFMGP VGK ++A AL++ + A ++ L E+ V
Sbjct: 607 IGS-----FLFMGPTGVGKTELARALAQFLFDADDALVRLDMSEYMEKHSVSRLVGAPPG 661
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R+P+SV+LL+++++A V + + ++ GR+ DS GR + N
Sbjct: 662 YVGYEEGGQLSEAVRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFRNT 721
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 722 VIVMTSN 728
>gi|296329696|ref|ZP_06872181.1| ATP-dependent Clp protease (class III stress gene) [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305674093|ref|YP_003865765.1| ATP-dependent Clp protease [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296153194|gb|EFG94058.1| ATP-dependent Clp protease (class III stress gene) [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305412337|gb|ADM37456.1| ATP-dependent Clp protease (class III stress protein) [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 699
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L E+V Q+ A VA V + + G K R GS LF+GP VGK +
Sbjct: 400 MKELEAKLRERVIGQEVAVQKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGVGKTE 454
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L++ + G +I L E+ V G ++ E V+RNP+S+
Sbjct: 455 LSKTLADELFGTKDAIIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSI 514
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 515 VLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 560
>gi|429123472|ref|ZP_19184005.1| hemolysin B ATP-binding subunit [Brachyspira hampsonii 30446]
gi|426280746|gb|EKV57756.1| hemolysin B ATP-binding subunit [Brachyspira hampsonii 30446]
Length = 828
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 595 CISSEPPQNKLHESQNDQLQKPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCK 651
I + ++ + E N +++ L+ +S KRL+ + L +KV Q+EA S+++ + + +
Sbjct: 479 FIEEDDIRHVISEITNIPIKRLLNSES-KRLIGMEEELHQKVVGQEEAISSISKAIRRSR 537
Query: 652 LG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV 710
G +R GS +F+GP VGK +A LSE + G S +I + E+ V
Sbjct: 538 AGLKTSKRPLGS-----FIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAV 592
Query: 711 -RVRG-------KTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSY 762
R+ G + E V+R P+S+IL ++I++A V + + +E G+L D++
Sbjct: 593 SRLIGAPPGYVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNF 652
Query: 763 GREISLGNVIFILTADW 779
GR++ N I I+T++
Sbjct: 653 GRKVDFSNTIIIITSNL 669
>gi|429769570|ref|ZP_19301670.1| negative regulator of genetic competence ClpC/MecB [Brevundimonas
diminuta 470-4]
gi|429186626|gb|EKY27563.1| negative regulator of genetic competence ClpC/MecB [Brevundimonas
diminuta 470-4]
Length = 941
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
+ D +L + L E+V Q+EA AVA V + G R G+G LF+GP VG
Sbjct: 579 EKDKLLKLEEKLHERVIGQEEAIRAVADAVRLAR--AGLREGSGPTA--TFLFLGPTGVG 634
Query: 678 KKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNP 729
K ++A L+E++ G MI + E V R+ G D+ G E V+R P
Sbjct: 635 KTELAKTLAEVIFGDQDAMIRIDMSEYGERHSVARLVGAPPGYVGYDEGGQLTEKVRRRP 694
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+SV+LL++I++A V + + + GRL D GR + N I I T++ D ++
Sbjct: 695 YSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQ 750
>gi|421178370|ref|ZP_15635984.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa E2]
gi|404548424|gb|EKA57375.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa E2]
Length = 850
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
S E+ +E + + + ++ P E + LQ + + L ++V QQE
Sbjct: 468 SKTEEVRVEDIAEIISRLTGIPVTELTAEEREKLLQ----------MEERLHQRVIGQQE 517
Query: 639 AASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
A +AV+ V + G + GS+ LF+GP VGK ++A AL+E+V G MI
Sbjct: 518 AITAVSDAVRLARAGLRQ----GSRPIATFLFLGPTGVGKTELAKALAEVVFGDEDAMIR 573
Query: 699 LGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIK 750
+ E V G D+ G E V+R P+SVILL++I++A V +
Sbjct: 574 IDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHADVNNILL 633
Query: 751 RAMERGRLVDSYGREISLGNVIFILTAD 778
+ + GRL D GR + N I I T++
Sbjct: 634 QVFDDGRLTDGKGRVVDFTNTIIIATSN 661
>gi|405984332|ref|ZP_11042635.1| ATP-dependent chaperone ClpB [Slackia piriformis YIT 12062]
gi|404388164|gb|EJZ83248.1| ATP-dependent chaperone ClpB [Slackia piriformis YIT 12062]
Length = 906
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E+V Q EA SAVA+ + + + G + R GS LF+GP VGK ++A AL+E
Sbjct: 571 LHERVVGQDEAVSAVASAIRRSRAGLSDPDRPIGS-----FLFLGPTGVGKTELAKALAE 625
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDID 739
+ M+ + E+ V+ G D+ G EAV+R P+SVILL++++
Sbjct: 626 YLFDDERAMVRIDMSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILLDEME 685
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLT 799
+A V + + ++ GRL D GR +S N I I+T++ +++ S+ ++ +
Sbjct: 686 KAHQDVFNILLQVLDDGRLTDGQGRVVSFKNTIIIMTSNVGSQAIREFSR----QKESMG 741
Query: 800 SLASGEWQLRLSIRGKTTKRRASWLDEEERST 831
S+ Q ++ K + +DE R+T
Sbjct: 742 SMVEDMMQGDMAAMAKKIAELQTQVDEALRNT 773
>gi|387928140|ref|ZP_10130818.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
gi|387587726|gb|EIJ80048.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
Length = 814
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 27/209 (12%)
Query: 589 VKDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
V+D +SS P +KL +++ ++L K L + L +V Q+EA A++
Sbjct: 473 VEDIASVVSSWTGIPVSKLAQTETEKLLK---------LEEILHSRVIGQEEAVKAISKA 523
Query: 647 VTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDH 705
V + + G +R GS +F+GP VGK ++A AL+E + G MI + ++
Sbjct: 524 VRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAEAMFGDEDAMIRI-DMSEY 577
Query: 706 EEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERG 756
E R G ++ G E V+R P+SVILL++I++A V + + +E G
Sbjct: 578 MEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDG 637
Query: 757 RLVDSYGREISLGNVIFILTADWLPDSLK 785
RL DS GR + N + I+T++ ++LK
Sbjct: 638 RLTDSKGRTVDFRNTVLIMTSNVGAEALK 666
>gi|302335816|ref|YP_003801023.1| ATPase AAA-2 domain-containing protein [Olsenella uli DSM 7084]
gi|301319656|gb|ADK68143.1| ATPase AAA-2 domain protein [Olsenella uli DSM 7084]
Length = 761
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 17/168 (10%)
Query: 623 KRLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
KRLLK +L +V Q EA S V+ T+ + + G + RR GS LF+GP VGK
Sbjct: 454 KRLLKMEEALERRVVGQDEAVSVVSKTIRRVRAGLSDPRRPGGS-----FLFLGPTGVGK 508
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIGE---AVKRNPF 730
++A AL+E + G+ +I E+ V G D+ G+ AV+ +P+
Sbjct: 509 TELAKALAEFLFGSEGSLITFDMSEYMEKFAVSRLIGAPPGYVGYDEGGQLTKAVRLHPY 568
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
SVIL +++++A V + + +E GRL D GR+++ N I I+T++
Sbjct: 569 SVILFDEMEKAHPDVFNILLQVLEEGRLTDGQGRKVNFRNAIVIMTSN 616
>gi|456013239|gb|EMF46898.1| DNA repair protein RadA [Planococcus halocryophilus Or1]
Length = 828
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +KL ++++D+L L+ +S L +V Q EA ++++ + + + G +R
Sbjct: 17 PVSKLAQTESDKL---LNLESI------LHNRVIGQNEAVTSISKAIRRARAGLKDPKRP 67
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + G MI R D E R
Sbjct: 68 IGS-----FIFLGPTGVGKTELARALAESMFGDEEAMI----RIDMSEYMERHSTSRLVG 118
Query: 712 ----VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREIS 767
G ++ E V+R P+SV+LL++I++A V + + +E GRL DS GR +
Sbjct: 119 SPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRRVD 178
Query: 768 LGNVIFILTADWLPDSLKFLSQ-GITLDEKK 797
N + I+T++ + LK+ G LD+ K
Sbjct: 179 FRNTVIIMTSNVGAEELKYNKYVGFNLDDAK 209
>gi|418061731|ref|ZP_12699572.1| ATPase AAA-2 domain protein [Methylobacterium extorquens DSM 13060]
gi|373564717|gb|EHP90805.1| ATPase AAA-2 domain protein [Methylobacterium extorquens DSM 13060]
Length = 964
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
+ D +L + L E+V Q+EA AVA V + G R G+G LF+GP VG
Sbjct: 606 EKDKLLKLEEKLHERVIGQEEAIRAVADAVRLAR--AGLREGSGPTA--TFLFLGPTGVG 661
Query: 678 KKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNP 729
K ++A L+E++ G MI + E V R+ G D+ G E V+R P
Sbjct: 662 KTELAKTLAEVIFGDQDAMIRIDMSEYGERHSVARLVGAPPGYVGYDEGGQLTEKVRRRP 721
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+SV+LL++I++A V + + + GRL D GR + N I I T++ D ++
Sbjct: 722 YSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQ 777
>gi|166030651|ref|ZP_02233480.1| hypothetical protein DORFOR_00317 [Dorea formicigenerans ATCC
27755]
gi|166029653|gb|EDR48410.1| ATPase family associated with various cellular activities (AAA)
[Dorea formicigenerans ATCC 27755]
Length = 811
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL ES+ +LQK L ++L ++V Q+EA +AVA V + ++G +R
Sbjct: 487 PVQKLQESEGVRLQK---------LEQTLHKRVVGQEEAVTAVAKAVRRGRVGLKDPKRP 537
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ ALSE + MI + E+ V
Sbjct: 538 IGS-----FLFLGPTGVGKTELSKALSEALFHDENAMIRVDMSEYMEQHSVAKMIGSPPG 592
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R+P+SVIL ++I++A V + + ++ G + DS GR++ N
Sbjct: 593 YVGHEEGGQLSEQVRRHPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNT 652
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 653 VIIMTSN 659
>gi|312621967|ref|YP_004023580.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202434|gb|ADQ45761.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 829
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E ++++L K L + L +V Q EA AVA + + ++G +R
Sbjct: 494 PVNKLTEDESERLLK---------LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRP 544
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + G MI + E+ V
Sbjct: 545 IGS-----FIFLGPTGVGKTELARALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPG 599
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R P+SV+L ++I++A V + + ++ GRL DS GR +S N
Sbjct: 600 YVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNT 659
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 660 VIIMTSN 666
>gi|452914077|ref|ZP_21962704.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
subtilis MB73/2]
gi|452116497|gb|EME06892.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
subtilis MB73/2]
Length = 656
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L E+V Q+ A VA V + + G K R GS LF+GP VGK +
Sbjct: 357 MKELEAKLHERVIGQEAAVQKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGVGKTE 411
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L++ + G +I L E+ V G ++ E V+RNP+S+
Sbjct: 412 LSKTLADELFGTKDAIIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSI 471
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 472 VLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 517
>gi|295094990|emb|CBK84081.1| ATPases with chaperone activity, ATP-binding subunit [Coprococcus
sp. ART55/1]
Length = 827
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 122/242 (50%), Gaps = 37/242 (15%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +KL E ++ +L+ RL L ++V Q+EA +AV+ + + ++G +R
Sbjct: 492 PVSKLTEKESKKLE---------RLESELHKRVVGQEEAVTAVSRAIKRSRVGLKDPKRP 542
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ AL+++V G+ +I + E+ V G
Sbjct: 543 MGS-----FLFLGPTGVGKTELSKALADIVFGSEDALIRVDMSEYMEKHSVSKMIGSPPG 597
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
++ G E V+ NP+SV+L ++I++A V + + ++ G + DS GR++ N
Sbjct: 598 YVGFEEGGQLSEKVRTNPYSVVLFDEIEKAHSDVFNILLQVLDDGHITDSQGRKVDFKNT 657
Query: 772 IFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERST 831
I I+T++ +QGI +D K+L + + + K +++ +DE +R+
Sbjct: 658 IIIMTSNT-------GAQGI-VDPKQLGFVTVSDET------KEHEKMKSNVMDELKRTF 703
Query: 832 KP 833
KP
Sbjct: 704 KP 705
>gi|428278948|ref|YP_005560683.1| hypothetical protein BSNT_02301 [Bacillus subtilis subsp. natto
BEST195]
gi|291483905|dbj|BAI84980.1| hypothetical protein BSNT_02301 [Bacillus subtilis subsp. natto
BEST195]
Length = 597
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L E+V Q+ A VA V + + G K R GS LF+GP VGK +
Sbjct: 298 MKELEAKLHERVIGQEAAVQKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGVGKTE 352
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L++ + G +I L E+ V G ++ E V+RNP+S+
Sbjct: 353 LSKTLADELFGTKDAIIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSI 412
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 413 VLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 458
>gi|389575964|ref|ZP_10165992.1| ATPase with chaperone activity, ATP-binding subunit [Eubacterium
cellulosolvens 6]
gi|389311449|gb|EIM56382.1| ATPase with chaperone activity, ATP-binding subunit [Eubacterium
cellulosolvens 6]
Length = 820
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 33/213 (15%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P K+ E+++ +L RL K L +V Q+EA +AV+ + + ++G R
Sbjct: 497 PLEKIAEAESKRL---------ARLEKILHARVIGQEEAVTAVSKAIRRGRVGLKDPGRP 547
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ AL++ V G+ MI + E+ V G
Sbjct: 548 IGS-----FLFLGPTGVGKTELSKALADAVFGSEDAMIRVDMSEYMEKHSVSKLIGSPPG 602
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+R+P+SVIL ++I++A V + + ++ G + D+ GR+IS +
Sbjct: 603 YVGYDEGGQLSEKVRRHPYSVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKISFKDT 662
Query: 772 IFILTAD------WLPDSLKFLSQGITLDEKKL 798
+ I+T++ P L FLS LD++KL
Sbjct: 663 VIIMTSNAGANRIVQPKKLGFLS----LDDEKL 691
>gi|187734574|ref|YP_001876686.1| ATPase AAA [Akkermansia muciniphila ATCC BAA-835]
gi|187424626|gb|ACD03905.1| ATPase AAA-2 domain protein [Akkermansia muciniphila ATCC BAA-835]
Length = 860
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 16/165 (9%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ + L KV Q EAASA+A + + + RR GS LF+GP VGK +A
Sbjct: 530 RMEEELKSKVIGQDEAASAIARALRRSRADIKDPRRPIGS-----FLFLGPTGVGKTYLA 584
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVI 733
L+E++ G S +I + ++ E R G D+ G EAV+R P+SVI
Sbjct: 585 RNLAEIMFGTSDALIQVD-MSEYMEKHTTSRLIGSPPGYVGHDEGGQLTEAVRRRPYSVI 643
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
L +++++A V + + +E G + DS GR+I+ N I ILT++
Sbjct: 644 LFDEVEKAHPDVMNLLLQILEEGSVTDSLGRKINFRNTIIILTSN 688
>gi|206895288|ref|YP_002247181.1| negative regulator of genetic competence ClpC/mecB
[Coprothermobacter proteolyticus DSM 5265]
gi|206737905|gb|ACI16983.1| negative regulator of genetic competence ClpC/mecB
[Coprothermobacter proteolyticus DSM 5265]
Length = 826
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 23/188 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L ES+ ++L K L + L +V Q EA SAVA + + + G +R
Sbjct: 512 PVTQLEESEKEKLAK---------LEEILHRRVVGQDEAISAVAQAIRRARTGLKDPKRP 562
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E++ G ++ E+ V
Sbjct: 563 IGS-----FIFLGPTGVGKTELAKALAEVLFGDESALVRFDMSEYMEKHTVSRLIGSPPG 617
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P+SVIL ++I++A + + + ++ GRL D+ GR + N
Sbjct: 618 YVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDIHNLLLQVLDDGRLTDAKGRIVDFKNT 677
Query: 772 IFILTADW 779
I I+T++
Sbjct: 678 IIIMTSNL 685
>gi|392971609|ref|ZP_10337003.1| chaperone protein ClpB [Staphylococcus equorum subsp. equorum Mu2]
gi|403047073|ref|ZP_10902542.1| ATPase subunit of an ATP-dependent protease [Staphylococcus sp.
OJ82]
gi|392510496|emb|CCI60289.1| chaperone protein ClpB [Staphylococcus equorum subsp. equorum Mu2]
gi|402763769|gb|EJX17862.1| ATPase subunit of an ATP-dependent protease [Staphylococcus sp.
OJ82]
Length = 869
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E+V Q +A VA V + + G R GS LF+GP VGK ++A +L+
Sbjct: 570 LHERVVGQDKAVDLVADAVVRARAGIKDPNRPIGS-----FLFLGPTGVGKTELAKSLAS 624
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ + MI + E+ V G ++ EAV+RNP+SVILL++I+
Sbjct: 625 TLFDSEKHMIRIDMSEYMEKHSVSRLIGAPPGYVGHDEGGQLTEAVRRNPYSVILLDEIE 684
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V + + +E GRL DS GRE+ N I I+T++
Sbjct: 685 KAHSDVFNVLLQILEEGRLTDSKGREVDFKNTIIIMTSN 723
>gi|289450441|ref|YP_003474803.1| negative regulator of genetic competence ClpC/MecB [Clostridiales
genomosp. BVAB3 str. UPII9-5]
gi|289184988|gb|ADC91413.1| negative regulator of genetic competence ClpC/MecB [Clostridiales
genomosp. BVAB3 str. UPII9-5]
Length = 924
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D K L K L +V Q A AV + + +LG +R GS LF+G V
Sbjct: 531 DTTRLKNLDKELKSRVIGQDAAVDAVVQAIRRGRLGLKDPQRPIGS-----FLFLGTTGV 585
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK ++A AL+E++ G MI L E+ +V G D+ G E V+R+
Sbjct: 586 GKTELAKALAEVMFGDPNAMIRLDMSEYMEKFDVSKLIGSPPGYVGYDEGGQLTEKVRRH 645
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+SVIL ++I++A V + + +E GRL DS GR + N I I+T++
Sbjct: 646 PYSVILFDEIEKAHPDVFNALLQILEDGRLTDSQGRTVKFANTIIIMTSN 695
>gi|384175098|ref|YP_005556483.1| ATP-dependent Clp protease ATP-binding subunit clpE [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|349594322|gb|AEP90509.1| ATP-dependent Clp protease ATP-binding subunit clpE [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
Length = 656
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L E+V Q+ A VA V + + G K R GS LF+GP VGK +
Sbjct: 357 MKELEAKLHERVIGQEAAVQKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGVGKTE 411
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L++ + G +I L E+ V G ++ E V+RNP+S+
Sbjct: 412 LSKTLADELFGTKDAIIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSI 471
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 472 VLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 517
>gi|302872270|ref|YP_003840906.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575129|gb|ADL42920.1| ATPase AAA-2 domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 829
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E ++++L K L + L +V Q EA AVA + + ++G +R
Sbjct: 494 PVNKLTEDESERLLK---------LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRP 544
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + G MI + E+ V
Sbjct: 545 IGS-----FIFLGPTGVGKTELARALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPG 599
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R P+SV+L ++I++A V + + ++ GRL DS GR +S N
Sbjct: 600 YVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNT 659
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 660 VIIMTSN 666
>gi|430757006|ref|YP_007209930.1| ATP-dependent Clp protease-like protein [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|430021526|gb|AGA22132.1| ATP-dependent Clp protease-like protein [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 699
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L E+V Q+ A VA V + + G K R GS LF+GP VGK +
Sbjct: 400 MKELEAKLHERVIGQEAAVQKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGVGKTE 454
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L++ + G +I L E+ + G ++ E V+RNP+S+
Sbjct: 455 LSKTLADELFGTKDAIIRLDMSEYMEKHAISKIIGSPPGYVGHEEAGQLTEKVRRNPYSI 514
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 515 VLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 560
>gi|222529809|ref|YP_002573691.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222456656|gb|ACM60918.1| ATPase AAA-2 domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 829
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E ++++L K L + L +V Q EA AVA + + ++G +R
Sbjct: 494 PVNKLTEDESERLLK---------LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRP 544
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + G MI + E+ V
Sbjct: 545 IGS-----FIFLGPTGVGKTELARALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPG 599
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R P+SV+L ++I++A V + + ++ GRL DS GR +S N
Sbjct: 600 YVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNT 659
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 660 VIIMTSN 666
>gi|357401726|ref|YP_004913651.1| class III stress response-related ATPase, AAA+ superfamily
[Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386357788|ref|YP_006056034.1| Clp protease ATP binding subunit [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337768135|emb|CCB76848.1| class III stress response-related ATPase, AAA+ superfamily
[Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365808296|gb|AEW96512.1| Clp protease ATP binding subunit [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 825
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 25/172 (14%)
Query: 623 KRLLK---SLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGK 678
+RLLK +L ++V Q EA +AVA V + + G G R GS LF+GP VGK
Sbjct: 520 ERLLKLEDALHQRVVGQDEAVTAVAEAVRRNRAGLGDPDRPVGS-----FLFLGPTGVGK 574
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR------------VRGKTALDKIGEAVK 726
++A AL+EL+ G +I R D E + R G ++ EAV+
Sbjct: 575 TELAKALAELLFGDEDRLI----RFDMSEFQERHTVSRLVGAPPGYVGHEEAGQLTEAVR 630
Query: 727 RNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
R P+SV+L +++++A V + + ++ GRL D+ GR + N + I+T++
Sbjct: 631 RKPYSVLLFDEVEKAHADVFNLLLQVLDDGRLTDAQGRTVDFRNTVVIMTSN 682
>gi|108762006|ref|YP_632353.1| ClpA/B family protein [Myxococcus xanthus DK 1622]
gi|108465886|gb|ABF91071.1| ClpA/B family protein [Myxococcus xanthus DK 1622]
Length = 839
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
D RL + L E+V EA + +A + + G RR GS LF+GP VG
Sbjct: 528 DSSRLLRLEQDLAERVIGHSEAVTRIARVIRRNYAGFASRRPMGS-----FLFLGPTGVG 582
Query: 678 KKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGKTAL-------DKIGEAVKRNP 729
K +MA AL++++ G+ ++ L E+ V R+ G A ++ E V+R P
Sbjct: 583 KTEMARALADVLFGSRDSLVRLDMSEMSEQHGVSRLIGSPAGYVGFGEGGQLTEPVRRRP 642
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
SV++L++I++A V+ + + +E GRL D GR I N + ++T +
Sbjct: 643 SSVVVLDEIEKAHREVQMLLLQVLEEGRLTDGKGRHIDFSNTVIVMTTNL 692
>gi|365157357|ref|ZP_09353630.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
gi|363625258|gb|EHL76300.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
Length = 811
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 27/209 (12%)
Query: 589 VKDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
V+D +SS P +KL +++ ++L L + L +V Q+EA AVA
Sbjct: 473 VEDIATVVSSWTGIPVSKLAQTETERLLN---------LEEILHSRVIGQEEAVKAVAKA 523
Query: 647 VTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDH 705
V + + G +R GS +F+GP VGK ++A AL+E + G MI + ++
Sbjct: 524 VRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAEAMFGDEDAMIRI-DMSEY 577
Query: 706 EEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERG 756
E R G ++ G E V+R P+SVILL++I++A V + + +E G
Sbjct: 578 MEKHSTSRLVGSPPGYVGFEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDG 637
Query: 757 RLVDSYGREISLGNVIFILTADWLPDSLK 785
RL DS GR + N + I+T++ ++LK
Sbjct: 638 RLTDSKGRTVDFRNTVLIMTSNVGAEALK 666
>gi|126653478|ref|ZP_01725571.1| ATP-dependent Clp protease ATPase subunit [Bacillus sp. B14905]
gi|126589756|gb|EAZ83890.1| ATP-dependent Clp protease ATPase subunit [Bacillus sp. B14905]
Length = 814
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
+L + L ++V Q EA A++ + + + G +R GS +F+GP VGK ++A
Sbjct: 502 QLEEELHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELA 556
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVI 733
AL+E++ G MI + ++ E R G D G E V+R P+SV+
Sbjct: 557 RALAEVMFGDEDAMIRV-DMSEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVV 615
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKF 786
LL++I++A V + + +E GRL DS GR + N + I+T++ D+LK+
Sbjct: 616 LLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADALKY 668
>gi|312127146|ref|YP_003992020.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777165|gb|ADQ06651.1| ATPase AAA-2 domain protein [Caldicellulosiruptor hydrothermalis
108]
Length = 829
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E ++++L K L + L +V Q EA AVA + + ++G +R
Sbjct: 494 PVNKLTEDESERLLK---------LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRP 544
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + G MI + E+ V
Sbjct: 545 IGS-----FIFLGPTGVGKTELARALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPG 599
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R P+SV+L ++I++A V + + ++ GRL DS GR +S N
Sbjct: 600 YVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNT 659
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 660 VIIMTSN 666
>gi|315302467|ref|ZP_07873317.1| negative regulator of genetic competence ClpC/MecB [Listeria
ivanovii FSL F6-596]
gi|313629167|gb|EFR97450.1| negative regulator of genetic competence ClpC/MecB [Listeria
ivanovii FSL F6-596]
Length = 721
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L +V Q+ A + VA + + ++G K R GS LF+GP VGK +
Sbjct: 416 MKYLESNLSGQVIGQEAAVNKVAKAIRRSRVGLKAKNRPIGS-----FLFVGPTGVGKTE 470
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ +L+ + G S MI L E+ V G ++ E V+RNP+S+
Sbjct: 471 LGRSLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 530
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 531 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 576
>gi|104783632|ref|YP_610130.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
entomophila L48]
gi|95112619|emb|CAK17347.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
entomophila L48]
Length = 854
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 119/234 (50%), Gaps = 34/234 (14%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +TD L R+KV E+ E V + G P K+ E + ++L
Sbjct: 510 ERSLQMVDQHGKTDNQLLRNKV----TEEEIAEVVSKWTGI-----PVAKMLEGEREKLL 560
Query: 615 KPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
K ++SL+ E+V Q EA +AVA V + + G + R +GS LF+G
Sbjct: 561 K----------MESLLHERVIGQDEAVTAVANAVRRSRAGLSDPNRPSGS-----FLFLG 605
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EA 724
P VGK ++ AL+E + M+ + E+ V R+ G ++ G EA
Sbjct: 606 PTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEA 665
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V+R P+SV+LL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 666 VRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
>gi|449094067|ref|YP_007426558.1| ATP-dependent Clp protease (class III stress gene) [Bacillus
subtilis XF-1]
gi|449027982|gb|AGE63221.1| ATP-dependent Clp protease (class III stress gene) [Bacillus
subtilis XF-1]
Length = 656
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L E+V Q+ A VA V + + G K R GS LF+GP VGK +
Sbjct: 357 MKELEAKLHERVIGQEAAVQKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGVGKTE 411
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L++ + G +I L E+ V G ++ E V+RNP+S+
Sbjct: 412 LSKTLADELFGTKDAIIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSI 471
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 472 VLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 517
>gi|157412565|ref|YP_001483431.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
ClpB [Prochlorococcus marinus str. MIT 9215]
gi|157387140|gb|ABV49845.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
ClpB [Prochlorococcus marinus str. MIT 9215]
Length = 918
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L K L EKV Q++A V+ + + ++G +R GS LFMGP VGK ++A
Sbjct: 610 LEKELSEKVIGQEKAIETVSAAIRRARVGMKSPKRPIGS-----FLFMGPTGVGKTELAK 664
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
+L+ + ++ L E+ V G ++ EAV+R P+SVILL
Sbjct: 665 SLATALFDEEDALLRLDMSEYMEKNAVARLLGAPPGYIGYEEGGQLTEAVRRKPYSVILL 724
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGIT 792
++I++A V + + ++ GRL DS GR + N + I+T++ S+ SQ I+
Sbjct: 725 DEIEKAHTEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSNLAGKSILERSQKIS 781
>gi|169830065|ref|YP_001700223.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
sphaericus C3-41]
gi|168994553|gb|ACA42093.1| Negative regulator of genetic competence clpC/mecB [Lysinibacillus
sphaericus C3-41]
Length = 813
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
+L + L ++V Q EA A++ + + + G +R GS +F+GP VGK ++A
Sbjct: 501 QLEEELHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELA 555
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVI 733
AL+E++ G MI + ++ E R G D G E V+R P+SV+
Sbjct: 556 RALAEVMFGDEDAMIRV-DMSEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVV 614
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKF 786
LL++I++A V + + +E GRL DS GR + N + I+T++ D+LK+
Sbjct: 615 LLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADALKY 667
>gi|261338715|ref|ZP_05966599.1| ATP-dependent chaperone protein ClpB [Bifidobacterium gallicum DSM
20093]
gi|270276270|gb|EFA22124.1| ATP-dependent chaperone protein ClpB [Bifidobacterium gallicum DSM
20093]
Length = 907
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L E +N++L R+ + L ++V QQEA AV+ V + + G + R
Sbjct: 555 PVGRLMEGENEKLL---------RMEEFLGDRVIGQQEAVRAVSDAVRRSRAGISDPNRP 605
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALD 719
GS LF+GP VGK ++A AL+E + M+ L E+ V A
Sbjct: 606 TGS-----FLFLGPTGVGKTELAKALAEFLFDDERAMVRLDMSEYMEKASVSRLIGAAPG 660
Query: 720 KIG--------EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
+G EAV+R P+SV+L +++++A+ V + + ++ GRL D GR + N
Sbjct: 661 YVGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDILLQVLDDGRLTDGQGRTVDFKNT 720
Query: 772 IFILTAD 778
I I+T++
Sbjct: 721 ILIMTSN 727
>gi|410455350|ref|ZP_11309232.1| ATPase AAA [Bacillus bataviensis LMG 21833]
gi|409929351|gb|EKN66431.1| ATPase AAA [Bacillus bataviensis LMG 21833]
Length = 717
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL Q++QL+ K L ++L KV Q++A +A + + + G K R
Sbjct: 403 PVGKLQ--QDEQLK-------MKALEENLKSKVIGQEKAVKKIAKAIRRSRAGLKSKHRP 453
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ L+E + G M+ L E+ V
Sbjct: 454 IGS-----FLFVGPTGVGKTELSKTLAEELFGTKDSMVRLDMSEYMEKHSVSKLIGSPPG 508
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+S+ILL++I++A V+ + +E GRL DS GR +S +
Sbjct: 509 YIGHDEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRIVSFKDT 568
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 569 VIIMTSN 575
>gi|443632988|ref|ZP_21117166.1| putative ATP-dependent Clp protease [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443346722|gb|ELS60781.1| putative ATP-dependent Clp protease [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 659
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L E+V Q+ A VA V + + G K R GS LF+GP VGK +
Sbjct: 359 MKELEAKLHERVIGQEAAVQKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGVGKTE 413
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L++ + G +I L E+ V G ++ E V+RNP+S+
Sbjct: 414 LSKTLADELFGTKDSIIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSI 473
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 474 VLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 519
>gi|418033500|ref|ZP_12671977.1| ATP-dependent Clp protease (class III stress protein) [Bacillus
subtilis subsp. subtilis str. SC-8]
gi|351469648|gb|EHA29824.1| ATP-dependent Clp protease (class III stress protein) [Bacillus
subtilis subsp. subtilis str. SC-8]
Length = 656
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L E+V Q+ A VA V + + G K R GS LF+GP VGK +
Sbjct: 357 MKELEAKLHERVIGQEAAVQKVAKAVRRSRAGLKSKNRPVGS-----FLFVGPTGVGKTE 411
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L++ + G +I L E+ V G ++ E V+RNP+S+
Sbjct: 412 LSKTLADELFGTKDAIIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSI 471
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 472 VLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 517
>gi|339449314|ref|ZP_08652870.1| ATPase AAA-2 domain-containing protein [Lactobacillus fructivorans
KCTC 3543]
Length = 671
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 16/172 (9%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L + V Q +A +VA + + ++G NG R GS LF+G +GK +
Sbjct: 373 LKDLAPNLKQHVIGQDKAVDSVAKAIKRNRIGFNGSGRPIGS-----FLFVGSTGIGKTE 427
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFS 731
MA L+ + G+ MI ++ EP+ + G D+ G E V+RNP+S
Sbjct: 428 MAKQLARELFGSEDSMIRF-DMSEYREPQSVAKLIGSPPGYVGYDEAGQLTEKVRRNPYS 486
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDS 783
+ILL+++++A V + ++ GRL DS GR +S + + I+T++ D+
Sbjct: 487 LILLDEVEKAHPDVLHTFLQILDDGRLTDSQGRTVSFKDTVIIMTSNAGSDA 538
>gi|299541899|ref|ZP_07052222.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZC1]
gi|424739339|ref|ZP_18167758.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZB2]
gi|298725637|gb|EFI66278.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZC1]
gi|422946736|gb|EKU41142.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZB2]
Length = 814
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
+L + L ++V Q EA A++ + + + G +R GS +F+GP VGK ++A
Sbjct: 502 QLEEELHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELA 556
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVI 733
AL+E++ G MI + ++ E R G D G E V+R P+SV+
Sbjct: 557 RALAEVMFGDEDAMIRV-DMSEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVV 615
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKF 786
LL++I++A V + + +E GRL DS GR + N + I+T++ D+LK+
Sbjct: 616 LLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADALKY 668
>gi|288922630|ref|ZP_06416807.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
gi|288346022|gb|EFC80374.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
Length = 875
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
RL L ++V Q EA S VA V + + G RR GS +F+GP VGK ++A
Sbjct: 569 RLDDVLHQRVVGQDEAVSLVADAVIRARSGIRDPRRPVGS-----FIFLGPTGVGKTELA 623
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
LSE + + MI + E V G ++ EAV+R P+SVIL
Sbjct: 624 RTLSEALFDSEEAMIRIDMSEYQERHTVSRLIGSPPGYVGYEEGGQLTEAVRRKPYSVIL 683
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD----WLPDSL 784
++I++A V + + ++ GRL D+ GR ++ N + I+T++ WL D++
Sbjct: 684 FDEIEKAHPDVFNTLLQVLDDGRLTDARGRTVNFTNTVIIMTSNIGSQWLMDAV 737
>gi|347751623|ref|YP_004859188.1| ATPase AAA [Bacillus coagulans 36D1]
gi|347584141|gb|AEP00408.1| ATPase AAA-2 domain protein [Bacillus coagulans 36D1]
Length = 816
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 16/167 (9%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +V Q+EA AVA V + + G +R GS +F+GP VGK ++A AL+E
Sbjct: 505 LHSRVIGQEEAVLAVAKAVRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAE 559
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDI 738
+ G MI + ++ E R G ++ G E V+R P+SV+LL++I
Sbjct: 560 AMFGDEDAMIRI-DMSEYMEKHSTSRLVGSPPGYVGFEEGGQLTEKVRRKPYSVVLLDEI 618
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
++A V + + ++ GRL DS GR + N I I+T++ D+LK
Sbjct: 619 EKAHPDVFNILLQVLDDGRLTDSKGRTVDFSNTIVIMTSNVGADALK 665
>gi|373468461|ref|ZP_09559713.1| negative regulator of genetic competence ClpC/MecB [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
gi|371766197|gb|EHO54464.1| negative regulator of genetic competence ClpC/MecB [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
Length = 831
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L K L E+V QQEA SAVA + + ++G +R GS LF+GP V
Sbjct: 500 DSQRLSNLEKVLHERVVGQQEAVSAVARAIRRGRVGLKDPKRPIGS-----FLFLGPTGV 554
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK +++ AL+ + G+ +I + E+ V G ++ E V+RN
Sbjct: 555 GKTELSKALAYSMFGSENALIRVDMSEYMEKHSVSKMVGSPPGYVGYEEGGQLSEKVRRN 614
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+SVIL ++I++A V + + ++ G + DS GR I N + ILT++
Sbjct: 615 PYSVILFDEIEKAHPDVFNILLQVLDDGHITDSSGRMIDFKNTVIILTSN 664
>gi|254425327|ref|ZP_05039045.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
gi|196192816|gb|EDX87780.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
Length = 822
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 14/163 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L ++L E+V Q EA AV+ V + ++G G R S L+F GP VGK ++A
Sbjct: 504 LEQTLHERVVGQDEAVEAVSRAVRRARVGLRGLDRPIAS-----LVFSGPTGVGKTELAK 558
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILL 735
AL+ V G+ MI L E V G D+ G EAV+R P+SVIL+
Sbjct: 559 ALASAVFGSEEAMIRLDMSEFMESHTVSKLIGSPPGFVGYDEGGQLTEAVRRRPYSVILM 618
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + ++ G L DS GRE+S N + I+T++
Sbjct: 619 DEIEKAHPDVFNILLQVLDDGHLSDSKGREVSFKNTLIIMTSN 661
>gi|20808693|ref|NP_623864.1| chaperone ATPase [Thermoanaerobacter tengcongensis MB4]
gi|254478740|ref|ZP_05092109.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
gi|20517331|gb|AAM25468.1| ATPases with chaperone activity, ATP-binding subunit
[Thermoanaerobacter tengcongensis MB4]
gi|214035305|gb|EEB76010.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
Length = 816
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 17/183 (9%)
Query: 615 KPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLF 670
K L + +RLL + L E+V Q EA AVA + + ++G +R GS +F
Sbjct: 491 KKLAEEESERLLHLEEILHERVIGQDEAVEAVAKAIRRARVGLKDPKRPIGS-----FIF 545
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG--- 722
+GP VGK +++ AL+E + G MI L E V G ++ G
Sbjct: 546 LGPTGVGKTELSKALAEALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLT 605
Query: 723 EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPD 782
E V+R P+SVILL++I++A V + + +E GRL DS GR + N + I+T++ +
Sbjct: 606 EKVRRRPYSVILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSNVGAE 665
Query: 783 SLK 785
LK
Sbjct: 666 LLK 668
>gi|255282672|ref|ZP_05347227.1| negative regulator of genetic competence ClpC/MecB [Bryantella
formatexigens DSM 14469]
gi|255266693|gb|EET59898.1| ATPase family associated with various cellular activities (AAA)
[Marvinbryantia formatexigens DSM 14469]
Length = 819
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 90/168 (53%), Gaps = 17/168 (10%)
Query: 623 KRLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
KRL+K +L ++V Q EA +AVA V + ++G R GS LF+GP VGK
Sbjct: 501 KRLMKLEQTLHKRVIGQDEAVTAVAKAVKRGRVGLKDPARPIGS-----FLFLGPTGVGK 555
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPF 730
+++ L+E+V G+ MI + E+ V G ++ E V+RNP+
Sbjct: 556 TELSKVLAEVVFGSEQSMIRVDMSEYMEKHSVSRLVGSPPGYVGYEEGGQLSEKVRRNPY 615
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
SVILL+++++A V + + ++ G + D+ GR++ N I I+T++
Sbjct: 616 SVILLDEVEKAHPDVFNILLQVLDDGHITDAQGRKVDFKNTIIIMTSN 663
>gi|410457556|ref|ZP_11311351.1| ATPase AAA [Bacillus azotoformans LMG 9581]
gi|409934309|gb|EKN71222.1| ATPase AAA [Bacillus azotoformans LMG 9581]
Length = 715
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K+L +L K+ Q+EA V+ + + + G K R GS LF+GP VGK +
Sbjct: 417 MKKLAANLSAKIIGQEEAVQKVSKAIKRSRAGLKDKNRPIGS-----FLFVGPTGVGKTE 471
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+E + G ++ L E+ V G ++ E V+RNP+ +
Sbjct: 472 LTKRLAEELFGTKDSLVRLDMSEYMEKHSVSKIIGAPPGYIGHDEAGQLTEKVRRNPYCI 531
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A + V+ + +E GRL DS GR +S + + I+T++
Sbjct: 532 ILLDEIEKAHLDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 577
>gi|296535581|ref|ZP_06897762.1| ATPase with chaperone activity, ATP-binding subunit [Roseomonas
cervicalis ATCC 49957]
gi|296264097|gb|EFH10541.1| ATPase with chaperone activity, ATP-binding subunit [Roseomonas
cervicalis ATCC 49957]
Length = 938
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 23/194 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGA 660
P ++L E++ ++L K + + L ++V Q+EA SAV+ V + G +
Sbjct: 603 PVSELTEAEREKLLK---------MEERLHQRVIGQEEAISAVSDAVRLARAGLRE---- 649
Query: 661 GSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------G 714
GSK LF+GP VGK ++A AL+E+V G ++ + ++ E R G
Sbjct: 650 GSKPVATFLFLGPTGVGKTELAKALAEVVYGDENALLRI-DMSEYMERHAVARLVGAPPG 708
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+R P+SVILL++I++A V + + + GRL D GR + N
Sbjct: 709 YVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFTNT 768
Query: 772 IFILTADWLPDSLK 785
I I T++ D ++
Sbjct: 769 IIIATSNLGADRIQ 782
>gi|257792794|ref|YP_003183400.1| ATP-dependent chaperone ClpB [Eggerthella lenta DSM 2243]
gi|317489076|ref|ZP_07947601.1| ATP-dependent chaperone ClpB [Eggerthella sp. 1_3_56FAA]
gi|325831045|ref|ZP_08164369.1| ATP-dependent chaperone protein ClpB [Eggerthella sp. HGA1]
gi|257476691|gb|ACV57011.1| ATP-dependent chaperone ClpB [Eggerthella lenta DSM 2243]
gi|316911808|gb|EFV33392.1| ATP-dependent chaperone ClpB [Eggerthella sp. 1_3_56FAA]
gi|325486966|gb|EGC89412.1| ATP-dependent chaperone protein ClpB [Eggerthella sp. HGA1]
Length = 887
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 20/201 (9%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E+V Q EA S+VA + + + G + R GS LF+GP VGK ++A AL+E
Sbjct: 575 LHERVVGQDEAVSSVAGAIRRNRAGLSDPNRPIGS-----FLFLGPTGVGKTELAKALAE 629
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDID 739
+ + M+ + E+ V+ G D+ G EAV+R P+SVILL++I+
Sbjct: 630 YLFDSEKAMVRIDMSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRKPYSVILLDEIE 689
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK-FLSQGITLDEKKL 798
+A V + + ++ GRL D GR +S N I I+T++ ++ F G DEK +
Sbjct: 690 KAHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNVGSQFIREFAEHG---DEKAM 746
Query: 799 TSLASGEWQLRLSIRGKTTKR 819
G LR + R + R
Sbjct: 747 KQAIDG--ALRATFRPEFINR 765
>gi|392331182|ref|ZP_10275797.1| hypothetical protein SCAZ3_04635 [Streptococcus canis FSL Z3-227]
gi|391418861|gb|EIQ81673.1| hypothetical protein SCAZ3_04635 [Streptococcus canis FSL Z3-227]
Length = 613
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 22/172 (12%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAV--ATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDR 675
D + + + LM +V Q++A AV A T+ Q L N KR A LF+GP
Sbjct: 285 DQERLEGFKEKLMNRVKGQEDAIEAVVDAVTIAQAGLQNEKRPLAS------FLFLGPTG 338
Query: 676 VGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV---------RVRGKTALDKIGEAVK 726
VGK ++A A++E + MI ++ +V R++G+ + E VK
Sbjct: 339 VGKTELAKAIAEALFDDEAAMIRFDMSEYKQKEDVTKLIGNRATRIKGQ-----LTEGVK 393
Query: 727 RNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ P+ V+LL++I++A V + ++ GRL DS GR IS N I I+T +
Sbjct: 394 QKPYCVLLLDEIEKAHSEVMDLFLQVLDDGRLTDSSGRLISFKNTIVIMTTN 445
>gi|336112769|ref|YP_004567536.1| ATPase AAA-2 domain-containing protein [Bacillus coagulans 2-6]
gi|335366199|gb|AEH52150.1| ATPase AAA-2 domain protein [Bacillus coagulans 2-6]
Length = 816
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 16/167 (9%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +V Q+EA AVA V + + G +R GS +F+GP VGK ++A AL+E
Sbjct: 505 LHSRVIGQEEAVLAVAKAVRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAE 559
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDI 738
+ G MI + ++ E R G ++ G E V+R P+SV+LL++I
Sbjct: 560 AMFGDEDAMIRI-DMSEYMEKHSTSRLVGSPPGYVGFEEGGQLTEKVRRKPYSVVLLDEI 618
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
++A V + + ++ GRL DS GR + N I I+T++ D+LK
Sbjct: 619 EKAHPDVFNILLQVLDDGRLTDSKGRTVDFSNTIVIMTSNVGADALK 665
>gi|254952729|gb|ACT97165.1| heat shock protein [Vitis labrusca x Vitis vinifera]
Length = 911
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 14/176 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + L + L ++V Q +A SAVA V + ++G G+ ++ GS LF+GP V
Sbjct: 556 DKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRVGLGRPQQPTGS-----FLFLGPTGV 610
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+E + +++ + E+ V G ++ EAV+R
Sbjct: 611 GKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHDEGGQLTEAVRRR 670
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
P+SV+L +++++A + V + + ++ GRL D GR + N + I+T++ + L
Sbjct: 671 PYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVIIMTSNLGAEHL 726
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 19/145 (13%)
Query: 22 HSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALE 81
H +A S H Q TPLHVA L+ +G LRQA I + N ++E F+ AL+
Sbjct: 18 HELAMNS--GHAQLTPLHVAVALITDHNGILRQAIIGAGGNEE---AANSVERVFNKALK 72
Query: 82 RLPTAQQNVSPGLDPPISNALMAALKRAQAHQR-RGCPEQQQQPLLAVKVELEQLIISIL 140
+LPT P + P+S L+ ++RAQ+ Q+ RG LAV +QLI+ +L
Sbjct: 73 KLPTQS---PPPDEIPVSTTLIKVVRRAQSSQKSRGDTH------LAV----DQLILGLL 119
Query: 141 DDPSVSRVMREASFSSPAVKATIEQ 165
+D + +++EA S+ VK+ +E+
Sbjct: 120 EDSQIGDLLKEAGVSTSRVKSEVEK 144
>gi|885934|gb|AAB09631.1| ClpB [Synechococcus elongatus PCC 7942]
Length = 883
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 28/233 (12%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
+R ++ + + T G+S + E E E + + G P +KL ES+ +Q
Sbjct: 521 QRKLNEMEGGLATTHTSGKSLLREEVTEVDIAEIISKWTGI-----PVSKLVESE---MQ 572
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K L+ D + L ++V Q+EA SAVA + + + G + +R S +F+GP
Sbjct: 573 KLLNLD------EELHQRVIGQEEAVSAVADAIQRSRAGLSDPKRPIAS-----FIFLGP 621
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAV 725
VGK ++A AL+ + MI + E+ V G D+ G EAV
Sbjct: 622 TGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAV 681
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SVIL ++I++A V + + ++ GR+ DS GR + N I ILT++
Sbjct: 682 RRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVDFKNTILILTSN 734
>gi|443477588|ref|ZP_21067424.1| ATP-dependent chaperone ClpB [Pseudanabaena biceps PCC 7429]
gi|443017260|gb|ELS31741.1| ATP-dependent chaperone ClpB [Pseudanabaena biceps PCC 7429]
Length = 891
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 18/185 (9%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L K L E+V Q+EA ++VA+ + + + G N R GS LF+GP VGK ++A
Sbjct: 589 LEKHLHERVIGQEEAVTSVASAIRRARAGMNDPNRPLGS-----FLFLGPTGVGKTELAR 643
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
AL+E + + M+ + E+ V G + EAV+R+P+SV+L
Sbjct: 644 ALAEFLFDSDASMVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQFSEAVRRHPYSVVLF 703
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT----ADWLPDSLKFLSQGI 791
+++++A V + + ++ GR+ DS GR + N + I+T +D + ++ K L++ I
Sbjct: 704 DEVEKAHPDVFNILLQVLDDGRITDSQGRLVDCKNTVIIMTSNIGSDRILETSKDLAEDI 763
Query: 792 TLDEK 796
D +
Sbjct: 764 DADSR 768
>gi|373859602|ref|ZP_09602328.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
gi|372450597|gb|EHP24082.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
Length = 813
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 25/195 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +KL +++ D+L K L + + +V Q+EA AV+ V + + G +R
Sbjct: 486 PVSKLAQTETDKLLK---------LEEIIHSRVIGQEEAVVAVSKAVRRARAGLKDPKRP 536
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A AL+E + G MI + ++ E R
Sbjct: 537 IGS-----FVFLGPTGVGKTELARALAEAMFGDEDAMIRI-DMSEYMEKHSTSRLVGSPP 590
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ G E V+R P+SVILL++I++A V + + +E GRL DS GR + N
Sbjct: 591 GYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRN 650
Query: 771 VIFILTADWLPDSLK 785
+ I+T++ ++LK
Sbjct: 651 TVLIMTSNVGAEALK 665
>gi|23097548|ref|NP_691014.1| ATP-dependent Clp protease [Oceanobacillus iheyensis HTE831]
gi|54035854|sp|Q8EU05.1|CLPB_OCEIH RecName: Full=Chaperone protein ClpB
gi|22775771|dbj|BAC12049.1| ATP-dependent Clp protease (ATP-binding subunit) [Oceanobacillus
iheyensis HTE831]
Length = 809
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 19/182 (10%)
Query: 617 LDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
L D RLL K L ++V Q EA +AVA + + + G +R GS +F+G
Sbjct: 494 LTKDETDRLLNMEKILHDRVIGQSEAVNAVAKAIRRARAGLKDPKRPIGS-----FIFLG 548
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---E 723
P VGK ++A AL+E++ MI + ++ E R G D+ G E
Sbjct: 549 PTGVGKTELARALAEVMFADEDAMIRI-DMSEYMERHATSRLVGSPPGYVGYDEGGQLTE 607
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDS 783
V+R P+SV+LL+++++A V + + +E GRL DS GR + N + I+T++
Sbjct: 608 KVRRKPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVIIMTSNVGASE 667
Query: 784 LK 785
LK
Sbjct: 668 LK 669
>gi|320102509|ref|YP_004178100.1| ATPase AAA-2 domain-containing protein [Isosphaera pallida ATCC
43644]
gi|319749791|gb|ADV61551.1| ATPase AAA-2 domain protein [Isosphaera pallida ATCC 43644]
Length = 844
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 21/186 (11%)
Query: 617 LDPDSFKRLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
L+ + RLLK L KV Q EA + ++ V + + G RR G +F G
Sbjct: 497 LEAEETSRLLKMEEELKAKVISQHEAIARISRAVRRSRAGVKNPRRPIG-----CFIFAG 551
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEA 724
P VGK +A +L+E + G + +I + E+ V G ++ E
Sbjct: 552 PTGVGKTHLAKSLAEFMFGNADSLIQIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQLTEK 611
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT----ADWL 780
++R P+SV+LL++I++A V + + ME GRL DS+GR + N I I+T AD +
Sbjct: 612 IRRRPYSVVLLDEIEKAHPDVFNMLLQIMEEGRLTDSFGRHVDFKNTILIMTTNAGADVI 671
Query: 781 PDSLKF 786
S +F
Sbjct: 672 SSSTQF 677
>gi|93141242|sp|P53533.3|CLPB1_SYNE7 RecName: Full=Chaperone protein ClpB 1
Length = 874
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 28/233 (12%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
+R ++ + + T G+S + E E E + + G P +KL ES+ +Q
Sbjct: 512 QRKLNEMEGGLATTHTSGKSLLREEVTEVDIAEIISKWTGI-----PVSKLVESE---MQ 563
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K L+ D + L ++V Q+EA SAVA + + + G + +R S +F+GP
Sbjct: 564 KLLNLD------EELHQRVIGQEEAVSAVADAIQRSRAGLSDPKRPIAS-----FIFLGP 612
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAV 725
VGK ++A AL+ + MI + E+ V G D+ G EAV
Sbjct: 613 TGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAV 672
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SVIL ++I++A V + + ++ GR+ DS GR + N I ILT++
Sbjct: 673 RRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVDFKNTILILTSN 725
>gi|434389225|ref|YP_007099836.1| ATP-dependent chaperone ClpB [Chamaesiphon minutus PCC 6605]
gi|428020215|gb|AFY96309.1| ATP-dependent chaperone ClpB [Chamaesiphon minutus PCC 6605]
Length = 907
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +V Q EA SAV+ + + + G R GS LFMGP VGK ++A AL+E
Sbjct: 578 LHNRVIGQNEAVSAVSAAIRRARAGMKDPNRPIGS-----FLFMGPTGVGKTELARALAE 632
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ + M+ L E+ V G ++ EAV+R+P+SV+L ++++
Sbjct: 633 FLFDSEEAMVRLDMSEYMEKHAVSRLVGAPPGYVGHEDGGQLTEAVRRHPYSVVLFDEVE 692
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
+A V + + ++ GR+ DS G+ +S N + ++T++ D +
Sbjct: 693 KAHPDVFNILLQVLDDGRITDSKGKTVSFANTVIVMTSNIASDQI 737
>gi|81299898|ref|YP_400106.1| ATPase [Synechococcus elongatus PCC 7942]
gi|81168779|gb|ABB57119.1| ATPase [Synechococcus elongatus PCC 7942]
Length = 883
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 28/233 (12%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
+R ++ + + T G+S + E E E + + G P +KL ES+ +Q
Sbjct: 521 QRKLNEMEGGLATTHTSGKSLLREEVTEVDIAEIISKWTGI-----PVSKLVESE---MQ 572
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K L+ D + L ++V Q+EA SAVA + + + G + +R S +F+GP
Sbjct: 573 KLLNLD------EELHQRVIGQEEAVSAVADAIQRSRAGLSDPKRPIAS-----FIFLGP 621
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAV 725
VGK ++A AL+ + MI + E+ V G D+ G EAV
Sbjct: 622 TGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAV 681
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SVIL ++I++A V + + ++ GR+ DS GR + N I ILT++
Sbjct: 682 RRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVDFKNTILILTSN 734
>gi|422421649|ref|ZP_16498602.1| negative regulator of genetic competence ClpC/MecB [Listeria
seeligeri FSL S4-171]
gi|313638539|gb|EFS03696.1| negative regulator of genetic competence ClpC/MecB [Listeria
seeligeri FSL S4-171]
Length = 722
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 417 MKHLESNLSGKVIGQEDAVKKVAKAIRRSRVGLKAKNRPIGS-----FLFVGPTGVGKTE 471
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G MI L E+ V G ++ E V+RNP+S+
Sbjct: 472 LGRTLARELFGTIEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 531
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 532 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 577
>gi|325283323|ref|YP_004255864.1| ATPase AAA-2 domain protein [Deinococcus proteolyticus MRP]
gi|324315132|gb|ADY26247.1| ATPase AAA-2 domain protein [Deinococcus proteolyticus MRP]
Length = 752
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSEL 688
L E+V+ Q +A A+A+ + + +LG G R ++ LF GP VGK +A AL+
Sbjct: 447 LGEQVYGQPDAVRALASALRRARLGLGGR----NRVSASFLFAGPSGVGKTHLAKALART 502
Query: 689 VSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIGEAVKRNPFSVILLEDID 739
+ G+ +I L +++EP + G ++ EAV+R PFSVILL++I+
Sbjct: 503 LFGSERSLIRL-DMSEYQEPHSVSKLIGSPPGYVGHEQGGRLTEAVRRQPFSVILLDEIE 561
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V + E GRL D GR + I I+T++
Sbjct: 562 KAHPDVYNAFLQVFEDGRLTDGQGRTVDFRRTIVIMTSN 600
>gi|402311568|ref|ZP_10830509.1| negative regulator of genetic competence ClpC/MecB [Lachnospiraceae
bacterium ICM7]
gi|400371740|gb|EJP24690.1| negative regulator of genetic competence ClpC/MecB [Lachnospiraceae
bacterium ICM7]
Length = 829
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 22/199 (11%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L K L E+V Q+EA +AVA + + ++G +R GS LF+GP V
Sbjct: 500 DSQRLNNLEKVLHERVVGQEEAVNAVARAIRRGRVGLKDPKRPIGS-----FLFLGPTGV 554
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK +++ AL+ + G+ +I + E+ V G D+ G E V+RN
Sbjct: 555 GKTELSKALAYSMFGSESALIRVDMSEYMEKHSVSKMVGSPPGYVGYDEGGQLSEKVRRN 614
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD------WLPD 782
P+SVIL ++I++A V + + ++ G + DS GR + N + ILT++ P
Sbjct: 615 PYSVILFDEIEKAHPDVFNILLQVLDDGHITDSSGRTVDFKNTVIILTSNAGAQRIVEPK 674
Query: 783 SLKFLSQGITLDEKKLTSL 801
L F S T DEK +++
Sbjct: 675 HLGFASN--TDDEKDYSAM 691
>gi|188590460|ref|YP_001919641.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum E3 str. Alaska E43]
gi|188500741|gb|ACD53877.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum E3 str. Alaska E43]
Length = 814
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 98/188 (52%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEK-VWWQQEAASAVATTVTQCKLG-NGKRR 658
P KL E ++++L K L++++EK V Q EA ++A V + ++G R
Sbjct: 493 PAKKLTEKESEKLLK----------LENILEKRVIGQTEAVESIAKAVRRARVGIKDPNR 542
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR----- 713
G+ +F+GP VGK +++ AL+E + G +I + E V
Sbjct: 543 PIGT-----FIFLGPTGVGKTELSKALAEAMFGDENSIIRIDMSEYMESNSVSKLIGSPP 597
Query: 714 GKTALD---KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D ++ EAV+R P+SV+LL++I++A V + + ME GRL DS+G+ ++ N
Sbjct: 598 GYVGYDDGGQLTEAVRRKPYSVVLLDEIEKAHQDVFNILLQIMEDGRLTDSHGKVVNFKN 657
Query: 771 VIFILTAD 778
I I+T++
Sbjct: 658 TIVIMTSN 665
>gi|376002531|ref|ZP_09780358.1| protein disaggregation chaperone [Arthrospira sp. PCC 8005]
gi|423067767|ref|ZP_17056557.1| ATP-dependent chaperone ClpB [Arthrospira platensis C1]
gi|375329102|emb|CCE16111.1| protein disaggregation chaperone [Arthrospira sp. PCC 8005]
gi|406710733|gb|EKD05937.1| ATP-dependent chaperone ClpB [Arthrospira platensis C1]
Length = 928
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ +L + L L +V QQEA AV+ + + + G R
Sbjct: 589 PVNRLLESERQKLLQ---------LESHLHRRVIGQQEAVEAVSAAIRRARAGMKDPGRP 639
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LFMGP VGK ++A AL+E + + MI + E+ V G
Sbjct: 640 IGS-----FLFMGPTGVGKTELARALAEFLFDSEEAMIRIDMSEYMEKHAVSRLVGAPPG 694
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R+P+SVIL +++++A V + + ++ GR+ DS GR + N
Sbjct: 695 YVGYDEGGQLSEAVRRHPYSVILFDEVEKAHPDVFNILLQVLDDGRITDSQGRLVDFRNT 754
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 755 VIVMTSN 761
>gi|205372096|ref|ZP_03224913.1| class III stress response-related ATPase [Bacillus coahuilensis
m4-4]
Length = 816
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 25/195 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +K+ +++ D+L L+ +S L +V Q+EA AV+ V + + G +R
Sbjct: 487 PVSKIAQTETDKL---LNLESI------LHSRVIGQEEAVKAVSKAVRRARAGLKDPKRP 537
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A AL+E + G MI + ++ E R
Sbjct: 538 IGS-----FIFLGPTGVGKTELARALAEAMFGDEDAMIRI-DMSEYMEKHSTSRLVGSPP 591
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G E V+R P+SVILL++I++A V + + +E GRL DS GR + N
Sbjct: 592 GYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRN 651
Query: 771 VIFILTADWLPDSLK 785
+ I+T++ +L+
Sbjct: 652 TVLIMTSNVGASTLQ 666
>gi|56750469|ref|YP_171170.1| ClpB protein [Synechococcus elongatus PCC 6301]
gi|56685428|dbj|BAD78650.1| ClpB protein [Synechococcus elongatus PCC 6301]
Length = 883
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 28/233 (12%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
+R ++ + + T G+S + E E E + + G P +KL ES+ +Q
Sbjct: 521 QRKLNEMEGGLATTHTSGKSLLREEVTEVDIAEIISKWTGI-----PVSKLVESE---MQ 572
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K L+ D + L ++V Q+EA SAVA + + + G + +R S +F+GP
Sbjct: 573 KLLNLD------EELHQRVIGQEEAVSAVADAIQRSRAGLSDPKRPIAS-----FIFLGP 621
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAV 725
VGK ++A AL+ + MI + E+ V G D+ G EAV
Sbjct: 622 TGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAV 681
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SVIL ++I++A V + + ++ GR+ DS GR + N I ILT++
Sbjct: 682 RRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVDFKNTILILTSN 734
>gi|256544962|ref|ZP_05472332.1| chaperone protein ClpB [Anaerococcus vaginalis ATCC 51170]
gi|256399349|gb|EEU12956.1| chaperone protein ClpB [Anaerococcus vaginalis ATCC 51170]
Length = 859
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 27/198 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL ES+ ++ D L E+V Q EA +V+ ++ + + G +
Sbjct: 544 PVNKLVESERSKILGLAD---------KLHERVIGQDEAVDSVSDSIIRARSGLKDINKP 594
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALD 719
GS +F+GP VGK ++A +L+E + + MI + E+ V A
Sbjct: 595 IGS-----FIFLGPTGVGKTELAKSLAEAMFDSEKNMIRIDMSEYMEKYSVSRLIGAAPG 649
Query: 720 KIG--------EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
+G EAV+RNP+SVIL ++I++A V + + ++ GRL DS GR ++ N
Sbjct: 650 YVGYEEGGQLTEAVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNT 709
Query: 772 IFILTAD----WLPDSLK 785
I I+T++ +L D LK
Sbjct: 710 IIIMTSNIGSTYLIDGLK 727
>gi|410461714|ref|ZP_11315360.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
gi|409925481|gb|EKN62692.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
Length = 807
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +KL +++ D+L L+ +S L +V Q+EA A+A + + + G +R
Sbjct: 489 PVSKLAQAETDRL---LNMESI------LHSRVIGQEEAVKAIAKAIRRARSGLKDPKRP 539
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A AL+E + G +I + ++ E R
Sbjct: 540 IGS-----FIFLGPTGVGKTELARALAEAMFGDEDALIRI-DMSEYMEKHTTSRLVGSPP 593
Query: 714 ---GKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ E V+R PFSVILL++I++A V + + +E GRL DS GR + N
Sbjct: 594 GYVGHEEGGQLTEKVRRKPFSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRN 653
Query: 771 VIFILTADWLPDSLK 785
I I+T++ LK
Sbjct: 654 TIVIMTSNVGASELK 668
>gi|403225132|gb|AFR24744.1| ATP-dependent clp protease ATP-binding subunit [uncultured
Pelagomonas]
Length = 833
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 34/264 (12%)
Query: 534 LNRNLGDTLQLNSNMVSSQPAERAVSPLNSPV----RTDLVLGRSKVLESAPEKTHIEPV 589
L R L D ++ + Q ERA L+ + + +++L K + S+ E E +
Sbjct: 418 LKRELRDVMKEKETAIREQDFERAADILDREIEIRAQLNIILSTVKRVSSSKETPTYESI 477
Query: 590 ---KDFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVA 644
D ++ + P NKL ++++++L D +L ++ Q++A SAV+
Sbjct: 478 VCEDDIAHVVAAWTGIPVNKLSKTESEKLLVMED---------TLHSRIIGQEQAVSAVS 528
Query: 645 TTVTQCKLG--NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPR 702
+ + ++G N R A LF GP VGK ++ AL+ GA M+ L
Sbjct: 529 KAIRRARVGLRNPNRPIAS------FLFSGPTGVGKTELTKALALFFFGAEDSMVRLDMS 582
Query: 703 RDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAME 754
E V G + ++ EAV+R P++V+L ++I++ V + + +E
Sbjct: 583 EYMERHTVAKLIGSPPGYVGYSEGGQLTEAVRRKPYTVVLFDEIEKGHPDVFNLLLQILE 642
Query: 755 RGRLVDSYGREISLGNVIFILTAD 778
GRL DS GR I N + ILT++
Sbjct: 643 DGRLTDSKGRTIDFKNTMIILTSN 666
>gi|291523676|emb|CBK81969.1| ATPases with chaperone activity, ATP-binding subunit [Coprococcus
catus GD/7]
Length = 814
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 85/159 (53%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E+V Q+EA SAVA + + ++G +R GS LF+GP VGK +++ AL+E
Sbjct: 512 LHERVIGQEEAVSAVAKAIRRGRVGLKDPKRPIGS-----FLFLGPTGVGKTELSKALAE 566
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDID 739
+ G MI + E+ V G D+ G E ++RNP+SV+L ++I+
Sbjct: 567 AMFGKEDAMIRVDMSEYMEKHSVSKLIGSPPGYVGYDEGGQLSEKIRRNPYSVLLFDEIE 626
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A + + + ++ G + DS GR+I N + I+T++
Sbjct: 627 KAHPDIFNILLQVLDDGHITDSQGRKIDFKNTVIIMTSN 665
>gi|56965211|ref|YP_176943.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
clausii KSM-K16]
gi|56911455|dbj|BAD65982.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
clausii KSM-K16]
Length = 700
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 612 QLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFM 671
+LQK + K L L KV Q+EA VA V + + G AG++ + LF+
Sbjct: 395 KLQKA-EQQKMKDLANRLAAKVIGQEEAVDKVAKAVKRSRAG----LKAGNR-PISFLFV 448
Query: 672 GPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGE 723
GP VGK ++ L++ V G MI L E+ V G ++ E
Sbjct: 449 GPTGVGKTELTKQLAQEVYGKKESMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEGGQLTE 508
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V+RNP+S+ILL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 509 RVRRNPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRVVSFKDTMIIMTSN 563
>gi|209524767|ref|ZP_03273314.1| ATP-dependent chaperone ClpB [Arthrospira maxima CS-328]
gi|209494911|gb|EDZ95219.1| ATP-dependent chaperone ClpB [Arthrospira maxima CS-328]
Length = 928
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ +L + L L +V QQEA AV+ + + + G R
Sbjct: 589 PVNRLLESERQKLLQ---------LESHLHRRVIGQQEAVEAVSAAIRRARAGMKDPGRP 639
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LFMGP VGK ++A AL+E + + MI + E+ V G
Sbjct: 640 IGS-----FLFMGPTGVGKTELARALAEFLFDSEEAMIRIDMSEYMEKHAVSRLVGAPPG 694
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R+P+SVIL +++++A V + + ++ GR+ DS GR + N
Sbjct: 695 YVGYDEGGQLSEAVRRHPYSVILFDEVEKAHPDVFNILLQVLDDGRITDSQGRLVDFRNT 754
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 755 VIVMTSN 761
>gi|259046666|ref|ZP_05737067.1| chaperone protein ClpB [Granulicatella adiacens ATCC 49175]
gi|259036831|gb|EEW38086.1| chaperone protein ClpB [Granulicatella adiacens ATCC 49175]
Length = 870
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 94/182 (51%), Gaps = 15/182 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E+V Q EA VA+ V + + G R GS LF+GP VGK ++A AL+E
Sbjct: 574 LHERVIGQDEAVQKVASAVLRSRAGLQNPSRPIGS-----FLFLGPTGVGKTELAKALAE 628
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ + M+ + E+ V G ++ E+V+RNP++++LL++I+
Sbjct: 629 DLFDSEDHMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTESVRRNPYTIVLLDEIE 688
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLT 799
+A V + + ++ GRL DS GR + N + I+T++ + +QG T+DE+ T
Sbjct: 689 KAHPDVFNILLQVLDDGRLTDSKGRVVDFKNTVMIMTSN-IGSQFLLENQGETIDEETRT 747
Query: 800 SL 801
++
Sbjct: 748 AV 749
>gi|331268385|ref|YP_004394877.1| ATPase AAA-2 domain-containing protein [Clostridium botulinum
BKT015925]
gi|329124935|gb|AEB74880.1| ATPase AAA-2 domain protein [Clostridium botulinum BKT015925]
Length = 813
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 23/190 (12%)
Query: 598 SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGK 656
S P KL E + D+L K L + L ++V Q EA ++A V + ++G
Sbjct: 488 SNVPIEKLTEKEADRLLK---------LEEILHKRVIGQNEAVKSIAKAVRRARVGLKDP 538
Query: 657 RRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK 715
+R GS +F+GP VGK +++ AL+E + G MI + E+ V R+ G
Sbjct: 539 KRPIGS-----FIFLGPTGVGKTELSKALAEAMFGDENNMIRVDMSEYMEKHAVSRLVGS 593
Query: 716 ----TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISL 768
D+ G E V+RNP+SV+L ++I++A V + + +E GRL DS G+ +
Sbjct: 594 PPGYVGHDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDSKGKTVDF 653
Query: 769 GNVIFILTAD 778
N I ILT++
Sbjct: 654 RNTIIILTSN 663
>gi|251778894|ref|ZP_04821814.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083209|gb|EES49099.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 814
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 98/188 (52%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEK-VWWQQEAASAVATTVTQCKLG-NGKRR 658
P KL E ++++L K L++++EK V Q EA ++A V + ++G R
Sbjct: 493 PAKKLTEKESEKLLK----------LENILEKRVIGQTEAVESIAKAVRRARVGIKDPNR 542
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR----- 713
G+ +F+GP VGK +++ AL+E + G +I + E V
Sbjct: 543 PIGT-----FIFLGPTGVGKTELSKALAEAMFGDENSIIRIDMSEYMESNSVSKLIGSPP 597
Query: 714 GKTALD---KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D ++ EAV+R P+SV+LL++I++A V + + ME GRL DS+G+ ++ N
Sbjct: 598 GYIGYDDGGQLTEAVRRKPYSVVLLDEIEKAHQDVFNILLQIMEDGRLTDSHGKVVNFKN 657
Query: 771 VIFILTAD 778
I I+T++
Sbjct: 658 TIVIMTSN 665
>gi|404482398|ref|ZP_11017625.1| hypothetical protein HMPREF1135_00685 [Clostridiales bacterium
OBRC5-5]
gi|404344559|gb|EJZ70916.1| hypothetical protein HMPREF1135_00685 [Clostridiales bacterium
OBRC5-5]
Length = 829
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 22/201 (10%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L K L E+V Q+EA +AVA + + ++G +R GS LF+GP V
Sbjct: 500 DSQRLNNLEKVLHERVVGQEEAVNAVARAIRRGRVGLKDPKRPIGS-----FLFLGPTGV 554
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK +++ AL+ + G+ +I + E+ V G D+ G E V+RN
Sbjct: 555 GKTELSKALAYSMFGSESALIRVDMSEYMEKHSVSKMVGSPPGYVGYDEGGQLSEKVRRN 614
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD------WLPD 782
P+SVIL ++I++A V + + ++ G + DS GR + N + ILT++ P
Sbjct: 615 PYSVILFDEIEKAHPDVFNILLQVLDDGHITDSSGRTVDFKNTVIILTSNAGAQRIVEPK 674
Query: 783 SLKFLSQGITLDEKKLTSLAS 803
L F S + DEK +++ S
Sbjct: 675 HLGFASN--SDDEKDYSAMKS 693
>gi|227499469|ref|ZP_03929580.1| ATP-binding ClpB chaperone [Anaerococcus tetradius ATCC 35098]
gi|227218531|gb|EEI83774.1| ATP-binding ClpB chaperone [Anaerococcus tetradius ATCC 35098]
Length = 861
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +KL ES+ ++ K L + L ++V QQEA +AV+ + + + G R
Sbjct: 547 PVSKLVESERSKILK---------LPEKLHQRVIGQQEAITAVSNAIIRARSGLKSHNRP 597
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALD 719
GS +F+GP VGK ++A AL+E + MI + E+ V A
Sbjct: 598 IGS-----FIFLGPTGVGKTELAKALTEAMFDDERNMIRIDMSEYMEKYSVSRLIGAAPG 652
Query: 720 KIG--------EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
+G EAV+R P+SVIL ++I++A V + + ++ GRL DS GR + N
Sbjct: 653 YVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVDFKNT 712
Query: 772 IFILT----ADWLPDSLKFLSQGITLDEKK 797
I I+T +++L D L G DE K
Sbjct: 713 IIIMTSNIGSEYLIDGLN--DNGTIDDENK 740
>gi|284990567|ref|YP_003409121.1| ATPase AAA-2 domain-containing protein [Geodermatophilus obscurus
DSM 43160]
gi|284063812|gb|ADB74750.1| ATPase AAA-2 domain protein [Geodermatophilus obscurus DSM 43160]
Length = 847
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 87/174 (50%), Gaps = 17/174 (9%)
Query: 617 LDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMG 672
L + +RLL L ++V Q +A VA V + ++G G R GS LF+G
Sbjct: 521 LTQEEVQRLLGLEDHLHQRVVGQDDAVRVVAEAVRRSRVGLGDPDRPIGS-----FLFLG 575
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEA 724
P VGK ++A AL+E + G MI L E V G ++ EA
Sbjct: 576 PTGVGKTELARALAEALFGDEDRMIRLDMSEFQERHTVSRLVGSPPGYVGYEDAGQLTEA 635
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V+R P+SV+LL++I++A V + + ++ GRL DS GR + N + I+T++
Sbjct: 636 VRRRPYSVVLLDEIEKAHPDVFNTLLQVLDDGRLTDSQGRTVDFKNTVLIMTSN 689
>gi|355622927|ref|ZP_09046937.1| hypothetical protein HMPREF1020_01016 [Clostridium sp. 7_3_54FAA]
gi|354822667|gb|EHF07020.1| hypothetical protein HMPREF1020_01016 [Clostridium sp. 7_3_54FAA]
Length = 824
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++++L K L L E+V Q+EA +AV+ + + ++G +R
Sbjct: 492 PVRKLAEEESERLLK---------LESILHERVVGQEEAVTAVSKAIRRGRVGLKDPKRP 542
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ ALSE + G MI + E+ V
Sbjct: 543 IGS-----FLFLGPTGVGKTELSKALSEAMFGTENAMIRVDMSEYMEKHSVSKMIGSPPG 597
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+SVIL ++I++A V + + ++ G + D+ GR+I N
Sbjct: 598 YVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQILDDGHITDAQGRKIDFKNT 657
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 658 VLIMTSN 664
>gi|225174179|ref|ZP_03728178.1| ATP-dependent chaperone ClpB [Dethiobacter alkaliphilus AHT 1]
gi|225169964|gb|EEG78759.1| ATP-dependent chaperone ClpB [Dethiobacter alkaliphilus AHT 1]
Length = 858
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 16/166 (9%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
RL L E+V Q EA +AV V + + G +R GS +F+GP VGK ++A
Sbjct: 560 RLDDILHERVIGQDEAVNAVTDAVIRARSGLKDPKRPIGS-----FIFLGPTGVGKTELA 614
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVI 733
AL+E + + MI + ++ E R G D+ G EAV+R P+SV+
Sbjct: 615 RALAESLFDSEENMIRI-DMSEYMEKHTVARLIGAPPGYVGYDEGGQLTEAVRRKPYSVL 673
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
L ++I++A V + + ++ GRL DS+GR + N I I+T++
Sbjct: 674 LFDEIEKAHYDVFNVLLQILDDGRLTDSHGRTVDFKNTIIIMTSNL 719
>gi|340356550|ref|ZP_08679194.1| ATP-dependent Clp protease [Sporosarcina newyorkensis 2681]
gi|339620999|gb|EGQ25565.1| ATP-dependent Clp protease [Sporosarcina newyorkensis 2681]
Length = 707
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L ++V Q EA +A + + + G K R GS LF+GP VGK +
Sbjct: 410 MKGLADNLGKQVIGQAEAVDKIAKAIRRSRAGLKSKDRPIGS-----FLFVGPTGVGKTE 464
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+E + G+ +I L E+ V G ++ E ++RNP+S+
Sbjct: 465 ITKVLAEELFGSRDALIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEQIRRNPYSI 524
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS+GR +S + + I+T++
Sbjct: 525 LLLDEIEKAHPDVQNMFLQIMEDGRLTDSHGRTVSFKDTVIIMTSN 570
>gi|295840508|ref|ZP_06827441.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295828024|gb|EDY43519.2| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 862
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
L + L +V Q EA SAVA V + + G G + LF+GP VGK ++A
Sbjct: 542 LEEHLHARVIGQDEAVSAVADAVLRSRAG----LSTGDRPIGSFLFLGPTGVGKTELART 597
Query: 685 LSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLE 736
L+E + G+ M+ L E V G ++ EAV+RNP+S++LL+
Sbjct: 598 LAEALFGSEDRMVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEAVRRNPYSLLLLD 657
Query: 737 DIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
+I++A V + + ++ GRL DS GR ++ N + ++T++
Sbjct: 658 EIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFTNTVIVMTSNL 700
>gi|295108565|emb|CBL22518.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
obeum A2-162]
Length = 832
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 20/180 (11%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L K L ++V Q EA AVA V + ++G R GS LF+GP VGK +++
Sbjct: 510 LEKELHKRVIGQDEAVKAVAQAVKRGRVGLKDPHRPIGS-----FLFLGPTGVGKTELSK 564
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILL 735
AL+E V G+ MI + E+ V G D+ G E V+RNP+SV+L
Sbjct: 565 ALAEAVFGSEQAMIRVDMSEYMEKHSVSKLIGSPPGYVGYDEGGQLSEKVRRNPYSVLLF 624
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD------WLPDSLKFLSQ 789
++I++A V + + ++ G + D++GR++ I I+T++ P L F+S+
Sbjct: 625 DEIEKAHPDVFNILLQVLDDGHITDAHGRKVDFKQTIIIMTSNVGAQAIIEPKKLGFMSE 684
>gi|398944095|ref|ZP_10671062.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM41(2012)]
gi|398158504|gb|EJM46848.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM41(2012)]
Length = 854
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 118/235 (50%), Gaps = 36/235 (15%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +T+ L RSKV E+ E V + G P +K+ E + D+L
Sbjct: 510 ERSLQMVDQHGKTENQLLRSKV----TEEEIAEVVSKWTGI-----PVSKMLEGERDKLM 560
Query: 615 KPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
K ++SL+ ++V Q EA AV+ V + + G + R +GS +F+G
Sbjct: 561 K----------MESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGS-----FMFLG 605
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---E 723
P VGK ++ AL+E + M+ + E+ V R G ++ G E
Sbjct: 606 PTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAPPGYVGYEEGGYLTE 664
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
AV+R P+SVILL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 665 AVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSN 719
>gi|218296422|ref|ZP_03497165.1| ATPase AAA-2 domain protein [Thermus aquaticus Y51MC23]
gi|218243216|gb|EED09747.1| ATPase AAA-2 domain protein [Thermus aquaticus Y51MC23]
Length = 740
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 16/171 (9%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR-RGAGSKGDMWLLFMGPDRV 676
D + L + L ++V Q+EA A+A + + ++G G R R A S LF+G V
Sbjct: 440 DDEKLMHLEEELRKRVVGQEEAIKALANALRRARVGLGGRTRVAAS-----FLFVGQSGV 494
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIGEAVKR 727
GK ++A AL+E++ G+ +I + +EP + G ++ EAV+R
Sbjct: 495 GKTQLAKALAEVLFGSERALIRF-DMSEFQEPHSISKLIGAPPGYVGYEQGGRLTEAVRR 553
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
PFSV+LL++I++A + + ++ GRL D GR + VI I+T++
Sbjct: 554 QPFSVVLLDEIEKAHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTSN 604
>gi|323694810|ref|ZP_08108965.1| ATPase AAA-2 domain-containing protein [Clostridium symbiosum
WAL-14673]
gi|323501126|gb|EGB17033.1| ATPase AAA-2 domain-containing protein [Clostridium symbiosum
WAL-14673]
Length = 830
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++++L K L L E+V Q+EA +AV+ + + ++G +R
Sbjct: 498 PVRKLAEEESERLLK---------LESILHERVVGQEEAVTAVSKAIRRGRVGLKDPKRP 548
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ ALSE + G MI + E+ V
Sbjct: 549 IGS-----FLFLGPTGVGKTELSKALSEAMFGTENAMIRVDMSEYMEKHSVSKMIGSPPG 603
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+SVIL ++I++A V + + ++ G + D+ GR+I N
Sbjct: 604 YVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQILDDGHITDAQGRKIDFKNT 663
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 664 VLIMTSN 670
>gi|311067883|ref|YP_003972806.1| ATP-dependent Clp protease [Bacillus atrophaeus 1942]
gi|419822130|ref|ZP_14345712.1| ATP-dependent Clp protease [Bacillus atrophaeus C89]
gi|310868400|gb|ADP31875.1| ATP-dependent Clp protease (class III stress protein) [Bacillus
atrophaeus 1942]
gi|388473677|gb|EIM10418.1| ATP-dependent Clp protease [Bacillus atrophaeus C89]
Length = 700
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L E+V Q+ A VA V + + G K R G+ LF+GP VGK +
Sbjct: 401 MKELEAKLHERVIGQEAAVQKVAKAVRRSRAGLKSKNRPVGT-----FLFVGPTGVGKTE 455
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
++ L++ + G +I L E+ V G ++ E V+RNP+S+
Sbjct: 456 LSKTLADELFGTKDSIIRLDMSEYMEKHAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSI 515
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 516 VLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 561
>gi|195953047|ref|YP_002121337.1| ATPase AAA-2 domain-containing protein [Hydrogenobaculum sp.
Y04AAS1]
gi|195932659|gb|ACG57359.1| ATPase AAA-2 domain protein [Hydrogenobaculum sp. Y04AAS1]
Length = 982
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 632 KVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVS 690
+V Q +A AVA + + + G +R S LF+GP VGK +++ AL+EL+
Sbjct: 686 RVIGQDDAVVAVAEAIRRARAGLKDPKRPIAS-----FLFLGPTGVGKTELSKALAELLF 740
Query: 691 GASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEAD 742
G +I L EE V G K+ EAV+R P+SVILL++I++A
Sbjct: 741 GEEDALIRLDMSEFKEEHTVSKLIGAPPGYVGYEEGGKLTEAVRRKPYSVILLDEIEKAH 800
Query: 743 MVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V + ++ GRL DS+GR + N + I+T++
Sbjct: 801 PRVFDLFLQVLDDGRLTDSHGRTVDFRNTVIIMTSN 836
>gi|424780576|ref|ZP_18207449.1| ClpB protein [Catellicoccus marimammalium M35/04/3]
gi|422842978|gb|EKU27425.1| ClpB protein [Catellicoccus marimammalium M35/04/3]
Length = 890
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
RL +L E+V Q+EA AV+ V + + G R GS LF+GP VGK ++A
Sbjct: 564 RLNDTLHERVIGQEEAVDAVSDAVIRSRAGLQDPNRPLGS-----FLFLGPTGVGKTELA 618
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
AL+E + + ++ + E+ V G ++ EAV+RNP++++L
Sbjct: 619 KALAENLFDSEEHIVRIDMSEYMEKHNVSRLVGAPPGYVGYEEGGQLTEAVRRNPYTIVL 678
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
L++I++A V + + ++ GRL DS GR + N I I+T++
Sbjct: 679 LDEIEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTILIMTSN 722
>gi|392956663|ref|ZP_10322189.1| ATPase AAA [Bacillus macauensis ZFHKF-1]
gi|391877160|gb|EIT85754.1| ATPase AAA [Bacillus macauensis ZFHKF-1]
Length = 723
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L ++V Q+EA VA + + + G K R GS LF+GP VGK +
Sbjct: 417 LKDLAHNLAQRVIGQEEAVHKVAKAIRRSRAGLKAKNRPIGS-----FLFVGPTGVGKTE 471
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ +L+ + G MI L E+ V G ++ E V+R P+S+
Sbjct: 472 LTKSLAGELFGDQDAMIRLDMSEYMEKHAVSKLIGSPPGYVGHEEAGQLTEIVRRKPYSI 531
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 532 ILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 577
>gi|414077572|ref|YP_006996890.1| ATP-dependent chaperone ClpB [Anabaena sp. 90]
gi|413970988|gb|AFW95077.1| ATP-dependent chaperone ClpB [Anabaena sp. 90]
Length = 872
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ QK L +S L E+V Q+EA SAV+ + + + G R
Sbjct: 559 PVNRLLESER---QKLLQLES------HLHERVIGQEEAVSAVSAAIRRARAGMKDPSRP 609
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LFMGP VGK ++A AL++ + + ++ L E+ V
Sbjct: 610 IGS-----FLFMGPTGVGKTELARALAQFLFDSDDALVRLDMSEYMEKHSVSRLVGAPPG 664
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EA++R+P+SV+LL+++++A V + + ++ GR+ DS GR + N
Sbjct: 665 YVGYEEGGQLSEAIRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRVTDSQGRAVDFRNT 724
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 725 VIVMTSN 731
>gi|427418168|ref|ZP_18908351.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425760881|gb|EKV01734.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 817
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 132/274 (48%), Gaps = 27/274 (9%)
Query: 533 QLNRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDF 592
+L ++L +Q V +Q +RA + + + L +A + + V+D
Sbjct: 415 ELKQSLRKIIQDKDAAVKAQEFDRASELRDQELELEAKLQDFNEDRAATDTRPVVTVEDI 474
Query: 593 LGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQC 650
++S P N++ +S++ L K L ++L +++ Q+ A +AVA + +
Sbjct: 475 AQVVASWTGVPANRITKSESAMLMK---------LEETLHQRIIGQENAVNAVAKAIRRA 525
Query: 651 KLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPE 709
++G ++R S +F GP VGK ++ AL+++V GA +I L ++ EP+
Sbjct: 526 RVGLRSEQRPIAS-----FIFCGPTGVGKTELTKALADIVFGAEDAIIRL-DMSEYMEPQ 579
Query: 710 VRVR---------GKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVD 760
+ G ++ EAV+R P++V+L ++I++A V + + ++ GRL D
Sbjct: 580 SVAKLIGSPPGYVGYGDGGQLTEAVRRKPYTVVLFDEIEKAHPDVFNLLLQLLDDGRLTD 639
Query: 761 SYGREISLGNVIFILTADWLPDSLKFLSQGITLD 794
S GR + N + I+T++ +++ GI D
Sbjct: 640 SQGRVVDFKNTVIIMTSNIGSRAIEKQGTGIGFD 673
>gi|344996728|ref|YP_004799071.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964947|gb|AEM74094.1| ATPase AAA-2 domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 829
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L E ++++L K L + L +V Q EA AVA + + ++G +R
Sbjct: 494 PVNRLTEDESERLLK---------LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRP 544
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + G MI + E+ V
Sbjct: 545 IGS-----FIFLGPTGVGKTELARALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPG 599
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R P+SV+L ++I++A V + + ++ GRL DS GR +S N
Sbjct: 600 YVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNT 659
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 660 VIIMTSN 666
>gi|170077059|ref|YP_001733697.1| endopeptidase Clp ATP-binding subunit B [Synechococcus sp. PCC
7002]
gi|169884728|gb|ACA98441.1| endopeptidase Clp ATP-binding chain B [Synechococcus sp. PCC 7002]
Length = 979
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ +L + L L E+V QQEA AV+ + + + G R
Sbjct: 568 PVNRLMESERQKLLQ---------LEGHLHERVIGQQEAVEAVSAAIRRARAGMKDPSRP 618
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +FMGP VGK ++A AL+ + + M+ + E+ V
Sbjct: 619 IGS-----FMFMGPTGVGKTELARALAAFLFDSEEAMVRIDMSEYMEKHAVSRLIGAPPG 673
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P+SV+LL+++++A V + + ++ GR+ DS GR + N
Sbjct: 674 YVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHKDVFNILLQVLDDGRITDSQGRVVDFRNT 733
Query: 772 IFILTAD 778
I ++T++
Sbjct: 734 IIVMTSN 740
>gi|392943462|ref|ZP_10309104.1| ATP-dependent chaperone ClpB [Frankia sp. QA3]
gi|392286756|gb|EIV92780.1| ATP-dependent chaperone ClpB [Frankia sp. QA3]
Length = 875
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
RL L ++V Q EA S VA V + + G RR GS +F+GP VGK ++A
Sbjct: 569 RLDDILHQRVVGQDEAVSLVADAVIRARSGIKDPRRPVGS-----FIFLGPTGVGKTELA 623
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
LSE + + MI + E V G ++ EAV+R P+SV+L
Sbjct: 624 RTLSEALFDSEEAMIRIDMSEYQERHTVSRLIGSPPGYVGYEEGGQLTEAVRRKPYSVVL 683
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD----WLPDSL 784
++I++A V + + ++ GRL D+ GR ++ N + I+T++ WL D++
Sbjct: 684 FDEIEKAHPDVFNTLLQVLDDGRLTDARGRTVNFTNTVIIMTSNIGSQWLMDAV 737
>gi|312793061|ref|YP_004025984.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180201|gb|ADQ40371.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 829
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L E ++++L K L + L +V Q EA AVA + + ++G +R
Sbjct: 494 PVNRLTEDESERLLK---------LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRP 544
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + G MI + E+ V
Sbjct: 545 IGS-----FIFLGPTGVGKTELARALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPG 599
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R P+SV+L ++I++A V + + ++ GRL DS GR +S N
Sbjct: 600 YVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNT 659
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 660 VIIMTSN 666
>gi|442322222|ref|YP_007362243.1| ClpB family protein [Myxococcus stipitatus DSM 14675]
gi|441489864|gb|AGC46559.1| ClpB family protein [Myxococcus stipitatus DSM 14675]
Length = 1136
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 17/200 (8%)
Query: 616 PLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPD 674
PL+P + L + +V QQ A VA+ V+ K G R+ GS LLF+GP
Sbjct: 505 PLEPARVRDFLST---RVLGQQAAVERVASVVSVLKSGLADTRKPLGS-----LLFVGPT 556
Query: 675 RVGKKKMASALSELVSGASPIMIPLGPRRDHEEPE--VRVRGKTAL-DKIGEAVKRNPFS 731
VGK +++ AL+EL+ G+ M+ L ++ P+ VR+ G ++ + V+R PF
Sbjct: 557 GVGKTELSKALAELLFGSRERMVRLD-MGEYAGPDALVRLLGDSSTPGYLSATVRRQPFC 615
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK----FL 787
V+LL++I++A V ++ + GRL D+ GR N + +LT++ D+ + F
Sbjct: 616 VVLLDEIEKAHPAVHDSLLGVLGEGRLTDASGRFTDFRNAVIVLTSNLGADTWRARVGFD 675
Query: 788 SQGITLDEKKLTSLASGEWQ 807
S G T D L + E Q
Sbjct: 676 SLGGTPDTAALRTHYLAEVQ 695
>gi|297570833|ref|YP_003696607.1| ATPase AAA [Arcanobacterium haemolyticum DSM 20595]
gi|296931180|gb|ADH91988.1| ATPase AAA-2 domain protein [Arcanobacterium haemolyticum DSM
20595]
Length = 873
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 15/187 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ + L ++V Q EA +A++ + + + G R GS +F GP VGK ++A
Sbjct: 507 RMEEELHKRVIGQSEAVTALSQAIRRTRAGLKDPNRPGGS-----FIFAGPTGVGKTELA 561
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVIL 734
AL+E + G +I L E+ V R+ G D+ G E V+R PFSV+L
Sbjct: 562 KALAEFLFGDEDALITLDMSEFQEKHTVSRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVL 621
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW-LPDSLKFLSQGITL 793
+++++A + ++ + +E GRL DS GR + N + I+T + D K ++ G
Sbjct: 622 FDEVEKAHQDLFNSLLQILEEGRLTDSQGRVVDFKNTVIIMTTNLGTKDIAKGVATGFQF 681
Query: 794 DEKKLTS 800
D + +S
Sbjct: 682 DGDQTSS 688
>gi|94985312|ref|YP_604676.1| ATPase AAA [Deinococcus geothermalis DSM 11300]
gi|94555593|gb|ABF45507.1| ATPase AAA-2 [Deinococcus geothermalis DSM 11300]
Length = 861
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 26/211 (12%)
Query: 580 APEKTHIEPVKDFLGCISSE---PPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQ 636
A E H+E + + + S P +KL E + ++L RL + L E+V Q
Sbjct: 522 AAEFAHMEVTDEDIASVVSRWTGIPVSKLMEGEREKLL---------RLEEQLHERVIGQ 572
Query: 637 QEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPI 695
A +VA + + + G N R GS +F+GP VGK ++A AL+E + +
Sbjct: 573 DRAIVSVADAIRRARAGLNDPNRPLGS-----FMFLGPTGVGKTELAKALAEFLFDSPDA 627
Query: 696 MIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRG 747
MI + E+ V G ++ EAV+R P+SVILL++I++A V
Sbjct: 628 MIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFN 687
Query: 748 NIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ + ++ GRL D GR + N + I+T++
Sbjct: 688 VLLQVLDDGRLTDGQGRTVDFRNTLIIMTSN 718
>gi|25010461|ref|NP_734856.1| hypothetical protein gbs0388 [Streptococcus agalactiae NEM316]
gi|25010773|ref|NP_735168.1| hypothetical protein gbs0718 [Streptococcus agalactiae NEM316]
gi|23094814|emb|CAD46032.1| unknown [Streptococcus agalactiae NEM316]
gi|23095127|emb|CAD46362.1| unknown [Streptococcus agalactiae NEM316]
Length = 610
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 22/172 (12%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAV--ATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDR 675
D + + + LM +V Q++A AV A T+ Q L N KR A LF+GP
Sbjct: 282 DQERLEGFKERLMNRVKGQEDAIEAVVDAVTIAQAGLQNEKRPLAS------FLFLGPTG 335
Query: 676 VGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV---------RVRGKTALDKIGEAVK 726
VGK ++A A++E + MI ++ +V R++G+ + E VK
Sbjct: 336 VGKTELAKAIAEALFDDEAAMIRFDMSEYKQKEDVTKLIGNRATRIKGQ-----LTEGVK 390
Query: 727 RNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ P+ V+LL++I++A V + ++ GRL DS GR IS N I I+T +
Sbjct: 391 QKPYCVLLLDEIEKAHSEVMDLFLQVLDDGRLTDSSGRLISFKNTIVIMTTN 442
>gi|291303744|ref|YP_003515022.1| ATPase AAA-2 domain-containing protein [Stackebrandtia nassauensis
DSM 44728]
gi|290572964|gb|ADD45929.1| ATPase AAA-2 domain protein [Stackebrandtia nassauensis DSM 44728]
Length = 854
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 624 RLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKK 679
RLLK L +++ Q +A AV+ + + + G +R +GS +F GP VGK
Sbjct: 506 RLLKMEEELHKRIIGQHDAVKAVSQAIRRTRAGLKDPKRPSGS-----FIFAGPSGVGKS 560
Query: 680 KMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFS 731
+++ AL+E + G+ +I L H+ V R+ G D+ G E V+R PFS
Sbjct: 561 ELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFS 620
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
V+L ++I++A V + + +E GRL D GR + N + ILT +
Sbjct: 621 VVLFDEIEKAHSEVFNTLLQILEDGRLTDGQGRIVDFKNTVLILTTNL 668
>gi|429217740|ref|YP_007179384.1| chaperone ATPase [Deinococcus peraridilitoris DSM 19664]
gi|429128603|gb|AFZ65618.1| ATPase with chaperone activity, ATP-binding subunit [Deinococcus
peraridilitoris DSM 19664]
Length = 743
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 563 SPVRTDLVLGRSKVLESAPE----KTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLD 618
S VR +L LG + + E + IE V + +G I +E KL + ++
Sbjct: 390 SRVRLNLSLGVTVSEDDTGEPFVSRDDIESVINSMGGIYAEESAEKLGDLED-------- 441
Query: 619 PDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGK 678
SL ++V+ Q +A A+++ + + ++G G R ++ LF+GP VGK
Sbjct: 442 ---------SLTDQVYGQPDAIKALSSALRRARVGLGGR----TRVSASFLFVGPSGVGK 488
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPF 730
+A AL+ + G+ +I + E V G ++ EAV+R PF
Sbjct: 489 THLAKALARSLFGSERALIRIDMSEFQESHSVSKLIGSPPGYVGYEQGGRLTEAVRRQPF 548
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
SVILL++I++A V + ++ GRL D GR + I I+T++
Sbjct: 549 SVILLDEIEKAHPDVYNTFLQVLDDGRLTDGLGRTVDFRRTILIMTSN 596
>gi|373494780|ref|ZP_09585379.1| chaperone ClpB [Eubacterium infirmum F0142]
gi|371967824|gb|EHO85292.1| chaperone ClpB [Eubacterium infirmum F0142]
Length = 861
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +KL ES+ ++L K L + L ++V Q EA AV+ + + + G + R
Sbjct: 548 PVSKLVESEREKLLK---------LPEILHKRVIGQDEAVVAVSDAILRARAGLKDENRP 598
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK--- 715
GS +FMGP VGK ++A ALSE + MI + E+ V R+ G
Sbjct: 599 IGS-----FIFMGPTGVGKTELAKALSEALFDTEKNMIRIDMSEYMEKHSVSRLVGAPPG 653
Query: 716 -TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R P+SVIL ++I++A V + + ++ GRL D+ GR + N
Sbjct: 654 YVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQLLDDGRLTDNQGRTVDFKNT 713
Query: 772 IFILTAD 778
I ILT++
Sbjct: 714 IIILTSN 720
>gi|392392052|ref|YP_006428654.1| chaperone ATPase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390523130|gb|AFL98860.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 826
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 17/176 (9%)
Query: 615 KPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLF 670
K L + +RLL ++L ++V Q++A AV+ V + + G +R GS +F
Sbjct: 497 KKLAQEESERLLGLEETLHQRVVGQEDAVKAVSRAVRRARAGLKDPKRPVGS-----FIF 551
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIG 722
+GP VGK ++A ALSE + G +I + E+ V G ++
Sbjct: 552 LGPTGVGKTELARALSEALFGEEDALIRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLT 611
Query: 723 EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
EAV+R P+SVILL++I++A V + + +E GRL D+ GR + N + I+T++
Sbjct: 612 EAVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNAVIIMTSN 667
>gi|337288558|ref|YP_004628030.1| ATP-dependent chaperone ClpB [Thermodesulfobacterium sp. OPB45]
gi|334902296|gb|AEH23102.1| ATP-dependent chaperone ClpB [Thermodesulfobacterium geofontis
OPF15]
Length = 872
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P ++L ES+ ++L R+ + L E+V Q A SA+A + + + G RR
Sbjct: 550 PVHRLLESEREKLL---------RIEERLKERVVGQDHAISAIANALRRARAGLKDPRRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + MI + E+ V
Sbjct: 601 IGS-----FLFIGPTGVGKTELAKALAEFMFDTEDAMIRIDMTEYMEKHSVSRLIGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P+SVIL ++I++A V + + ++ GRL D GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDGKGRTVDFKNT 715
Query: 772 IFILTAD 778
I I+T++
Sbjct: 716 IIIMTSN 722
>gi|147811710|emb|CAN72669.1| hypothetical protein VITISV_012280 [Vitis vinifera]
Length = 906
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 19/145 (13%)
Query: 22 HSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALE 81
H +A S H Q TPLHVA L+ P+G LRQA I + N ++E F+ AL+
Sbjct: 18 HELAMNS--GHAQLTPLHVAVALITDPNGILRQAIIGAGGNEE---AANSVERVFNKALK 72
Query: 82 RLPTAQQNVSPGLDPPISNALMAALKRAQAHQR-RGCPEQQQQPLLAVKVELEQLIISIL 140
+LP+ P + P+S L+ ++RAQ+ Q+ RG LAV +QLI+ +L
Sbjct: 73 KLPSQS---PPPDEIPVSTTLIKVVRRAQSSQKSRGDTH------LAV----DQLILGLL 119
Query: 141 DDPSVSRVMREASFSSPAVKATIEQ 165
+D + +++EA S+ VK+ +E+
Sbjct: 120 EDSQIGDLLKEAGVSTSRVKSEVEK 144
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + L + L ++V Q +A SAVA V + + G G+ ++ GS LF+GP V
Sbjct: 551 DKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPTGS-----FLFLGPTGV 605
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+E + +++ + E+ V G ++ EAV+R
Sbjct: 606 GKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHDEGGQLTEAVRRR 665
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
P+SV+L +++++A + V + + ++ GRL D GR + N + I+T++ + L
Sbjct: 666 PYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVIIMTSNLGAEHL 721
>gi|256826525|ref|YP_003150484.1| ATP-dependent chaperone ClpB [Cryptobacterium curtum DSM 15641]
gi|256582668|gb|ACU93802.1| ATP-dependent chaperone ClpB [Cryptobacterium curtum DSM 15641]
Length = 871
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E+V Q EA SAVA + + + G + R GS LF+GP VGK ++A AL+E
Sbjct: 568 LHERVVGQDEAVSAVAGAIRRNRAGLSDPDRPIGS-----FLFLGPTGVGKTELAKALAE 622
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDID 739
+ M+ + E+ V+ G D+ G EAV+R P+SVILL++I+
Sbjct: 623 YLFDTERAMVRIDMSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILLDEIE 682
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V + + ++ GRL D GR +S N I I+T++
Sbjct: 683 KAHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSN 721
>gi|25011044|ref|NP_735439.1| hypothetical protein gbs0991 [Streptococcus agalactiae NEM316]
gi|23095444|emb|CAD46650.1| unknown [Streptococcus agalactiae NEM316]
Length = 639
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 22/172 (12%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAV--ATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDR 675
D + + + LM +V Q++A AV A T+ Q L N KR A LF+GP
Sbjct: 311 DQERLEGFKERLMNRVKGQEDAIEAVVDAVTIAQAGLQNEKRPLAS------FLFLGPTG 364
Query: 676 VGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV---------RVRGKTALDKIGEAVK 726
VGK ++A A++E + MI ++ +V R++G+ + E VK
Sbjct: 365 VGKTELAKAIAEALFDDEAAMIRFDMSEYKQKEDVTKLIGNRATRIKGQ-----LTEGVK 419
Query: 727 RNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ P+ V+LL++I++A V + ++ GRL DS GR IS N I I+T +
Sbjct: 420 QKPYCVLLLDEIEKAHSEVMDLFLQVLDDGRLTDSSGRLISFKNTIVIMTTN 471
>gi|187934389|ref|YP_001884443.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum B str. Eklund 17B]
gi|187722542|gb|ACD23763.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum B str. Eklund 17B]
Length = 814
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++++L K L L ++V Q EA ++A V + ++G R
Sbjct: 493 PAKKLTEKESEKLLK---------LENILQKRVIGQTEAVESIAKAVRRARVGIKDPNRP 543
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
G+ +F+GP VGK +++ AL+E + G +I + E V G
Sbjct: 544 IGT-----FIFLGPTGVGKTELSKALAETMFGDENSIIRIDMSEYMESNSVSKLIGSPPG 598
Query: 715 KTALD---KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D ++ EAV+R P+SV+LL++I++A V + + ME GRL DS+G+ ++ N
Sbjct: 599 YVGYDDGGQLTEAVRRKPYSVVLLDEIEKAHQDVFNILLQIMEDGRLTDSHGKVVNFKNT 658
Query: 772 IFILTAD 778
I I+T++
Sbjct: 659 IVIMTSN 665
>gi|452943878|ref|YP_007500043.1| ATPase AAA-2 domain protein [Hydrogenobaculum sp. HO]
gi|452882296|gb|AGG15000.1| ATPase AAA-2 domain protein [Hydrogenobaculum sp. HO]
Length = 982
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 632 KVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVS 690
+V Q +A AVA + + + G +R S LF+GP VGK +++ AL+EL+
Sbjct: 686 RVIGQDDAVVAVAEAIRRARAGLKDPKRPIAS-----FLFLGPTGVGKTELSKALAELLF 740
Query: 691 GASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEAD 742
G +I L EE V G K+ EAV+R P+SVILL++I++A
Sbjct: 741 GEEDALIRLDMSEFKEEHTVSKLIGAPPGYVGYEEGGKLTEAVRRKPYSVILLDEIEKAH 800
Query: 743 MVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V + ++ GRL DS+GR + N + I+T++
Sbjct: 801 PRVFDLFLQVLDDGRLTDSHGRTVDFRNTVIIMTSN 836
>gi|300871410|ref|YP_003786283.1| hemolysin B [Brachyspira pilosicoli 95/1000]
gi|300689111|gb|ADK31782.1| hemolysin B [Brachyspira pilosicoli 95/1000]
Length = 815
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 18/197 (9%)
Query: 595 CISSEPPQNKLHESQNDQLQKPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCK 651
I+ + ++ + E N +++ LD +S KRL+ L K+ Q+EA S+++ + + +
Sbjct: 463 IINEDDIRHVISEITNIPVKRLLDSES-KRLIGMEDELHSKIVGQKEAISSISKAIRRAR 521
Query: 652 LG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV 710
G ++ GS +F+GP VGK +A LSE + G S +I + E+ V
Sbjct: 522 AGLKSTKKPLGS-----FIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAV 576
Query: 711 -RVRG-------KTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSY 762
R+ G + E V+R P+S+IL ++I++A + + + +E G+L D++
Sbjct: 577 SRLIGAPPGYVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDITNILLQVLEEGQLTDNF 636
Query: 763 GREISLGNVIFILTADW 779
GR++ N I I+T++
Sbjct: 637 GRKVDFSNTIIIITSNL 653
>gi|392374710|ref|YP_003206543.1| chaperone [Candidatus Methylomirabilis oxyfera]
gi|258592403|emb|CBE68712.1| Chaperone [Candidatus Methylomirabilis oxyfera]
Length = 810
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ + L ++V Q EA +V+ + + + G R GS +F+GP VGK ++A
Sbjct: 497 RMEQDLTKRVVGQIEAIESVSRAIRRSRAGIKSPSRPVGS-----FIFLGPTGVGKTELA 551
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIG---EAVKRNPF 730
AL+E + G +I R D E R G D G E V+R PF
Sbjct: 552 KALAEFLFGTEDALI----RVDMSEYMERFSTSRLIGAPPGYIGYDDSGQLTEKVRRRPF 607
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
SVILL++I++A V + + E GRL DSYGR + N I I+T++
Sbjct: 608 SVILLDEIEKAHPEVFNLLLQIFEDGRLTDSYGRIVDFKNTILIMTSN 655
>gi|431807833|ref|YP_007234731.1| hemolysin B [Brachyspira pilosicoli P43/6/78]
gi|434381418|ref|YP_006703201.1| hemolysin B [Brachyspira pilosicoli WesB]
gi|404430067|emb|CCG56113.1| hemolysin B [Brachyspira pilosicoli WesB]
gi|430781192|gb|AGA66476.1| hemolysin B [Brachyspira pilosicoli P43/6/78]
Length = 834
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 18/197 (9%)
Query: 595 CISSEPPQNKLHESQNDQLQKPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCK 651
I+ + ++ + E N +++ LD +S KRL+ L K+ Q+EA S+++ + + +
Sbjct: 482 IINEDDIRHVISEITNIPVKRLLDSES-KRLIGMEDELHSKIVGQKEAISSISKAIRRAR 540
Query: 652 LG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV 710
G ++ GS +F+GP VGK +A LSE + G S +I + E+ V
Sbjct: 541 AGLKSTKKPLGS-----FIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAV 595
Query: 711 -RVRG-------KTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSY 762
R+ G + E V+R P+S+IL ++I++A + + + +E G+L D++
Sbjct: 596 SRLIGAPPGYVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDITNILLQVLEEGQLTDNF 655
Query: 763 GREISLGNVIFILTADW 779
GR++ N I I+T++
Sbjct: 656 GRKVDFSNTIIIITSNL 672
>gi|383765463|ref|YP_005444444.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Phycisphaera
mikurensis NBRC 102666]
gi|381385731|dbj|BAM02547.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Phycisphaera
mikurensis NBRC 102666]
Length = 877
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 23/203 (11%)
Query: 623 KRLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
+RLL+ L + V Q EA V+ + + + G RR GS +F+GP VGK
Sbjct: 519 QRLLQLEDELHKTVVSQDEAIKTVSRAIRRARSGLKDPRRPMGS-----FIFIGPSGVGK 573
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPF 730
++ AL+E + G + +I + E+ V G ++ E ++R P+
Sbjct: 574 TLLSKALAEFMFGDADALIRIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQLTEQIRRRPY 633
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK----- 785
+V+LL++I++A V + + ME G+L DS+GR + NVI I+T++ D +K
Sbjct: 634 AVVLLDEIEKAHPDVFNTLLQVMEEGQLTDSFGRHVDFRNVILIMTSNIGADLIKNKASF 693
Query: 786 -FLSQGITLDEKKLTSLASGEWQ 807
F + +D K+ + GE +
Sbjct: 694 GFQKRDENVDYDKMKTTLQGEVE 716
>gi|418070581|ref|ZP_12707856.1| ATP-dependent chaperone ClpB [Lactobacillus rhamnosus R0011]
gi|423078097|ref|ZP_17066784.1| ATP-dependent chaperone protein ClpB [Lactobacillus rhamnosus ATCC
21052]
gi|357540001|gb|EHJ24018.1| ATP-dependent chaperone ClpB [Lactobacillus rhamnosus R0011]
gi|357552477|gb|EHJ34250.1| ATP-dependent chaperone protein ClpB [Lactobacillus rhamnosus ATCC
21052]
Length = 868
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 17/187 (9%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L +L ++V Q EA +AV+ V + + G R GS LF+GP V
Sbjct: 557 DRQKLLHLADNLHQRVIGQDEAVTAVSDAVLRSRAGLQDPSRPLGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 612 GKTELAKALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEQGGQLTEAVRRN 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLS 788
P++++LL++I++A+ V + + ++ GRL D GR + N I I+T++ ++L
Sbjct: 672 PYTIVLLDEIEKANPDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSNL---GSEYLL 728
Query: 789 QGITLDE 795
G+ DE
Sbjct: 729 DGVQKDE 735
>gi|404475279|ref|YP_006706710.1| hemolysin B [Brachyspira pilosicoli B2904]
gi|404436768|gb|AFR69962.1| hemolysin B [Brachyspira pilosicoli B2904]
Length = 834
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 18/197 (9%)
Query: 595 CISSEPPQNKLHESQNDQLQKPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCK 651
I+ + ++ + E N +++ LD +S KRL+ L K+ Q+EA S+++ + + +
Sbjct: 482 IINEDDIRHVISEITNIPVKRLLDSES-KRLIGMEDELHSKIVGQKEAISSISKAIRRAR 540
Query: 652 LG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV 710
G ++ GS +F+GP VGK +A LSE + G S +I + E+ V
Sbjct: 541 AGLKSTKKPLGS-----FIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAV 595
Query: 711 -RVRG-------KTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSY 762
R+ G + E V+R P+S+IL ++I++A + + + +E G+L D++
Sbjct: 596 SRLIGAPPGYVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDITNILLQVLEEGQLTDNF 655
Query: 763 GREISLGNVIFILTADW 779
GR++ N I I+T++
Sbjct: 656 GRKVDFSNTIIIITSNL 672
>gi|416386179|ref|ZP_11684917.1| ATP-dependent Clp protease regulatory subunit [Crocosphaera
watsonii WH 0003]
gi|357264720|gb|EHJ13568.1| ATP-dependent Clp protease regulatory subunit [Crocosphaera
watsonii WH 0003]
Length = 789
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 27/190 (14%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG--NGKRR 658
P N+L E++++ S L +L +K+ Q A AV+ + + ++G N KR
Sbjct: 455 PVNQLTETESE---------SLMYLEDNLHKKIIGQDAAVEAVSRAIRRARIGLQNPKRP 505
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR----- 713
A +F GP VGK ++ AL+E + G+ MI L ++ EP+ +
Sbjct: 506 IAS------FIFAGPTGVGKTELTKALAEFLFGSKDAMIRLD-MSEYMEPQTVSKLIGTA 558
Query: 714 ----GKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLG 769
G ++ EAV+R P+SV+L ++I++A V + + +E GRL DS GR +
Sbjct: 559 PGFVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFR 618
Query: 770 NVIFILTADW 779
N + I+T++
Sbjct: 619 NTLVIMTSNL 628
>gi|225457237|ref|XP_002284179.1| PREDICTED: chaperone protein ClpB1 [Vitis vinifera]
Length = 911
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 19/145 (13%)
Query: 22 HSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALE 81
H +A S H Q TPLHVA L+ P+G LRQA I + N ++E F+ AL+
Sbjct: 18 HELAMNS--GHAQLTPLHVAVALITDPNGILRQAIIGAGGNEE---AANSVERVFNKALK 72
Query: 82 RLPTAQQNVSPGLDPPISNALMAALKRAQAHQR-RGCPEQQQQPLLAVKVELEQLIISIL 140
+LP+ P + P+S L+ ++RAQ+ Q+ RG LAV +QLI+ +L
Sbjct: 73 KLPSQS---PPPDEIPVSTTLIKVVRRAQSSQKSRGDTH------LAV----DQLILGLL 119
Query: 141 DDPSVSRVMREASFSSPAVKATIEQ 165
+D + +++EA S+ VK+ +E+
Sbjct: 120 EDSQIGDLLKEAGVSTSRVKSEVEK 144
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + L + L ++V Q +A SAVA V + + G G+ ++ GS LF+GP V
Sbjct: 556 DKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPTGS-----FLFLGPTGV 610
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+E + +++ + E+ V G ++ EAV+R
Sbjct: 611 GKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHDEGGQLTEAVRRR 670
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
P+SV+L +++++A + V + + ++ GRL D GR + N + I+T++ + L
Sbjct: 671 PYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVIIMTSNLGAEHL 726
>gi|73663109|ref|YP_301890.1| ATPase subunit of an ATP-dependent protease [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|72495624|dbj|BAE18945.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
Length = 869
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E+V Q +A V+ V + + G R GS LF+GP VGK ++A +L+
Sbjct: 570 LHERVVGQDKAVDLVSDAVVRARAGIKDPNRPIGS-----FLFLGPTGVGKTELAKSLAS 624
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ + MI + E+ V G ++ EAV+RNP+SVILL++I+
Sbjct: 625 TLFDSEKHMIRIDMSEYMEKHSVSRLIGAPPGYVGHDEGGQLTEAVRRNPYSVILLDEIE 684
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V + + +E GRL DS GRE+ N I I+T++
Sbjct: 685 KAHSDVFNVLLQILEEGRLTDSKGREVDFKNTIIIMTSN 723
>gi|407792049|ref|ZP_11139122.1| clpB protein [Gallaecimonas xiamenensis 3-C-1]
gi|407198214|gb|EKE68253.1| clpB protein [Gallaecimonas xiamenensis 3-C-1]
Length = 857
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 23/188 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P K+ E + D+L + D +L ++V Q+EA +AVA + + + G + RR
Sbjct: 547 PVAKMLEGERDKLLQMED---------NLHKRVVGQEEAVTAVANAIRRSRAGLSDPRRP 597
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK--- 715
GS LF+GP VGK ++ AL+E + M+ L E+ V R+ G
Sbjct: 598 IGS-----FLFLGPTGVGKTELCKALAEFLFDTDDAMVRLDMSEFMEKHAVSRLVGAPPG 652
Query: 716 -TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
++ G EAV+R P+SVILL+++++A V + + ++ GRL DS GR + N
Sbjct: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNLLLQVLDDGRLTDSQGRTVDFRNT 712
Query: 772 IFILTADW 779
+ I+T++
Sbjct: 713 VVIMTSNL 720
>gi|389862461|ref|YP_006364701.1| ATP-dependent Clp protease ATP-binding subunit [Modestobacter
marinus]
gi|388484664|emb|CCH86202.1| ATP-dependent Clp protease ATP-binding subunit [Modestobacter
marinus]
Length = 847
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L +++ Q+EA +V+ + + + G RR GS +F GP VGK ++A
Sbjct: 505 RMEDELHKRIIGQEEAIKSVSQAIRRTRAGLKDPRRPGGS-----FIFAGPSGVGKTELA 559
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVIL 734
AL++ + G +I + H++ V R+ G D+ G E V+R PFSV+L
Sbjct: 560 KALAQFLFGEDDALIQIDMGEFHDKFTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVVL 619
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
++I++A V + + +E GRL D GR + N I ILT +
Sbjct: 620 FDEIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNL 664
>gi|256372717|ref|YP_003110541.1| ATP-dependent chaperone ClpB [Acidimicrobium ferrooxidans DSM
10331]
gi|256009301|gb|ACU54868.1| ATP-dependent chaperone ClpB [Acidimicrobium ferrooxidans DSM
10331]
Length = 828
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 23/196 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR-RG 659
P KL ES+ ++L D +L +V Q EA AVA + + + G R R
Sbjct: 540 PVTKLLESETEKLLHIED---------ALRARVVGQDEAIDAVANAIRRSRAGIADRNRP 590
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK--- 715
GS LF+GP VGK + A AL+E + MI + E V R+ G
Sbjct: 591 IGS-----FLFLGPTGVGKTETAKALAEYLFDDERAMIRIDMSEYQERHSVSRLVGAPPG 645
Query: 716 -TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R P++V+L ++I++A V + ++ GRL D GR ++ N
Sbjct: 646 YVGYDEGGQLTEAVRRRPYAVVLFDEIEKAHADVFNVFLQILDDGRLTDGQGRVVNFTNT 705
Query: 772 IFILTADWLPDSLKFL 787
I I+T++ D +F
Sbjct: 706 ILIMTSNLADDPRRFF 721
>gi|315640793|ref|ZP_07895895.1| chaperone protein ClpB [Enterococcus italicus DSM 15952]
gi|315483548|gb|EFU74042.1| chaperone protein ClpB [Enterococcus italicus DSM 15952]
Length = 868
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLMK---------LNETLHQRVIGQDEAVDAVSDAVLRSRAGLQDPHRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHSVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ L +G+T D
Sbjct: 716 VMIMTSNI---GSNLLLEGVTQD 735
>gi|116672360|ref|YP_833293.1| ATPase [Arthrobacter sp. FB24]
gi|116612469|gb|ABK05193.1| ATPase AAA-2 domain protein [Arthrobacter sp. FB24]
Length = 857
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
D + RL + L ++V Q++A S +A +V + + G G A + LF+GP VG
Sbjct: 536 DRERLARLEEDLHQRVVGQEDAVSLIAKSVRRNRTGMG----AAGRPIGSFLFLGPTGVG 591
Query: 678 KKKMASALSELVSGASPIMI-----PLGPRRDHEEPEVRVRGKTALDKIG---EAVKRNP 729
K ++A AL+ + G+ MI G R G D+ G E V+RNP
Sbjct: 592 KTELAKALAGSLFGSEDSMIRFDMSEFGERHTVSRLVGAPPGYVGYDEAGQLTERVRRNP 651
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
+S++LL+++++A V + + ++ GRL D +GR + N + I+T++
Sbjct: 652 YSIVLLDEVEKAHPDVFNLLLQVLDDGRLTDGHGRTVDFRNTVVIMTSNL 701
>gi|16331154|ref|NP_441882.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|383322897|ref|YP_005383750.1| ClpB protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326066|ref|YP_005386919.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383491950|ref|YP_005409626.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437218|ref|YP_005651942.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|451815311|ref|YP_007451763.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|54035750|sp|P74459.1|CLPB1_SYNY3 RecName: Full=Chaperone protein ClpB 1
gi|1653648|dbj|BAA18560.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|339274250|dbj|BAK50737.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|359272216|dbj|BAL29735.1| ClpB protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275386|dbj|BAL32904.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278556|dbj|BAL36073.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961469|dbj|BAM54709.1| ClpB protein [Bacillus subtilis BEST7613]
gi|451781280|gb|AGF52249.1| ClpB protein [Synechocystis sp. PCC 6803]
Length = 898
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 23/197 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L E++ +L + L L ++V Q+EA +AV+ + + + G R
Sbjct: 562 PMNRLMETERQKLLQ---------LEGHLHQRVIGQKEAVAAVSAAIRRARAGMKDPSRP 612
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LFMGP VGK ++A AL+ + + M+ + E+ V
Sbjct: 613 IGS-----FLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEYMEKHAVSRLIGAPPG 667
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P+SV+LL+++++A + V + + ++ GR+ DS GR + N
Sbjct: 668 YVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDGRITDSQGRVVDFRNT 727
Query: 772 IFILTADWLPDSLKFLS 788
I ++T++ D + LS
Sbjct: 728 IIVMTSNIGSDHILSLS 744
>gi|424854144|ref|ZP_18278502.1| ATP-dependent chaperone ClpB [Rhodococcus opacus PD630]
gi|356664191|gb|EHI44284.1| ATP-dependent chaperone ClpB [Rhodococcus opacus PD630]
Length = 808
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +++ E + ++L +RL L +V Q +A A+A V + + G N R
Sbjct: 488 PASQMTEEEKERL---------RRLEDELHRRVIGQDDAVRAIARAVRRSRTGMNDPDRP 538
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+ + G M+ L E V
Sbjct: 539 VGS-----FLFLGPTGVGKTELAKALAATLFGDENKMLRLDMSEFGERHTVSRLVGAPPG 593
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+SVILL++I++A V + + ++ GRL D GR + N
Sbjct: 594 YVGYGEAGQLTEQVRRNPYSVILLDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNT 653
Query: 772 IFILTADWLPD-------SLKFLSQGITLDEKKLTSLASGEWQLRLSIR 813
+ I+T++ D +L F + EK L G +LR S+R
Sbjct: 654 VLIMTSNLGSDIISSKSGALGFSTGDAEASEKPLRDRVRG--RLRESMR 700
>gi|418576687|ref|ZP_13140820.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
gi|379324844|gb|EHY91989.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
Length = 869
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E+V Q +A V+ V + + G R GS LF+GP VGK ++A +L+
Sbjct: 570 LHERVVGQDKAVDLVSDAVVRARAGIKDPNRPIGS-----FLFLGPTGVGKTELAKSLAS 624
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ + MI + E+ V G ++ EAV+RNP+SVILL++I+
Sbjct: 625 TLFDSEKHMIRIDMSEYMEKHSVSRLIGAPPGYVGHDEGGQLTEAVRRNPYSVILLDEIE 684
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V + + +E GRL DS GRE+ N I I+T++
Sbjct: 685 KAHSDVFNVLLQILEEGRLTDSKGREVDFKNTIIIMTSN 723
>gi|403238378|ref|ZP_10916964.1| Class III stress response-related ATPase, ClpC [Bacillus sp.
10403023]
Length = 814
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 29/267 (10%)
Query: 533 QLNRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKV--LESAPEKTHIEPVK 590
+L + L + + V SQ E+A S +S R L +K E ++ V
Sbjct: 416 ELEQKLEEVRKEKDAAVQSQEFEKAASLRDSEQRLREQLEETKKNWKEKQGQENSEVTVD 475
Query: 591 DFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D +SS P +KL +++ D+L + + +L S +V Q+EA AV+ V
Sbjct: 476 DIAMVVSSWTGVPVSKLAQTEADKLL------NMEEILHS---RVIGQEEAVKAVSKAVR 526
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +R GS +F+GP VGK ++A AL+E + G MI + ++ E
Sbjct: 527 RSRAGLKDPKRPTGS-----FIFLGPTGVGKTELARALAESIFGDEDAMIRV-DMSEYME 580
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
R G ++ G E V+R P+SVILL++I++A V + + +E GRL
Sbjct: 581 KHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRL 640
Query: 759 VDSYGREISLGNVIFILTADWLPDSLK 785
DS GR + N I I+T++ +LK
Sbjct: 641 TDSKGRTVDFRNTILIMTSNVGASTLK 667
>gi|226323338|ref|ZP_03798856.1| hypothetical protein COPCOM_01112 [Coprococcus comes ATCC 27758]
gi|225208022|gb|EEG90376.1| ATPase family associated with various cellular activities (AAA)
[Coprococcus comes ATCC 27758]
Length = 815
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 98/187 (52%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L+ES++++L K+L K+L ++V Q+EA A++ V + ++G R
Sbjct: 490 PVTRLNESESERL---------KKLDKTLEKRVIGQEEAIQALSKAVKRGRVGLKDPARP 540
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ AL+E + G MI + E+ V
Sbjct: 541 IGS-----FLFLGPTGVGKTELSKALAEALFGNEEDMIRVDMSEYMEKHSVSKMIGSPPG 595
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+SVIL ++I++A V + + ++ G + DS GR++ N
Sbjct: 596 YVGHEDGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNT 655
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 656 VIIMTSN 662
>gi|386354296|ref|YP_006052542.1| Clp protease ATP binding subunit [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365804804|gb|AEW93020.1| Clp protease ATP binding subunit [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 845
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRG 659
P L E + D+L L + L ++V Q EA +AVA V + + G R
Sbjct: 527 PVKSLTEEERDRLLG---------LEEHLHQRVIGQDEAVTAVADAVLRSRAGLADPNRP 577
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS LF+GP VGK ++A AL+E + G+ M+ L +++E R
Sbjct: 578 IGS-----FLFLGPTGVGKTELARALAEALFGSEDRMVRLD-MSEYQERHTVSRLVGAPP 631
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R+P+S++LL+++++A V + + ++ GRL D+ GR + N
Sbjct: 632 GYVGHDEAGQLTEAVRRHPYSLVLLDEVEKAHPDVFNTLLQVLDDGRLTDAQGRTVDFKN 691
Query: 771 VIFILTAD 778
+ ++T++
Sbjct: 692 TVVVMTSN 699
>gi|357398262|ref|YP_004910187.1| ATP-dependent Clp protease ATP-binding subunit clpC [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|337764671|emb|CCB73380.1| ATP-dependent Clp protease ATP-binding subunit clpC [Streptomyces
cattleya NRRL 8057 = DSM 46488]
Length = 840
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 19/177 (10%)
Query: 615 KPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLF 670
K L + RLL + L ++V Q EA +AVA V + + G R GS LF
Sbjct: 524 KSLTEEERDRLLGLEEHLHQRVIGQDEAVTAVADAVLRSRAGLADPNRPIGS-----FLF 578
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG-- 722
+GP VGK ++A AL+E + G+ M+ L +++E R G D+ G
Sbjct: 579 LGPTGVGKTELARALAEALFGSEDRMVRLD-MSEYQERHTVSRLVGAPPGYVGHDEAGQL 637
Query: 723 -EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
EAV+R+P+S++LL+++++A V + + ++ GRL D+ GR + N + ++T++
Sbjct: 638 TEAVRRHPYSLVLLDEVEKAHPDVFNTLLQVLDDGRLTDAQGRTVDFKNTVVVMTSN 694
>gi|312135577|ref|YP_004002915.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
owensensis OL]
gi|311775628|gb|ADQ05115.1| ATPase AAA-2 domain protein [Caldicellulosiruptor owensensis OL]
Length = 829
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E ++++L K L + L +V Q EA AVA + + ++G +R
Sbjct: 494 PVNKLTEDESERLLK---------LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRP 544
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + G +I + E+ V
Sbjct: 545 IGS-----FIFLGPTGVGKTELARALAEALFGTEDALIRIDMSEYMEKFNVSKLIGSPPG 599
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R P+SV+L ++I++A V + + ++ GRL DS GR +S N
Sbjct: 600 YVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNT 659
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 660 VIIMTSN 666
>gi|257791981|ref|YP_003182587.1| ATPase AAA-2 domain-containing protein [Eggerthella lenta DSM 2243]
gi|317489990|ref|ZP_07948482.1| ATPase [Eggerthella sp. 1_3_56FAA]
gi|325829962|ref|ZP_08163420.1| negative regulator of genetic competence ClpC/MecB [Eggerthella sp.
HGA1]
gi|257475878|gb|ACV56198.1| ATPase AAA-2 domain protein [Eggerthella lenta DSM 2243]
gi|316910988|gb|EFV32605.1| ATPase [Eggerthella sp. 1_3_56FAA]
gi|325488129|gb|EGC90566.1| negative regulator of genetic competence ClpC/MecB [Eggerthella sp.
HGA1]
Length = 854
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 126/260 (48%), Gaps = 31/260 (11%)
Query: 536 RNLGDTLQL----NSNMVSSQPAERA--VSPLNSPVRTDLVLGRSKVLESAPEKTHIEPV 589
R L D L+ + ++SQ ERA + S ++ + K E A + H V
Sbjct: 418 RELDDELRTIRGEKDSAIASQDFERAAQLRDQESELKAKRIEAEKKWEEDAQKSVHQVTV 477
Query: 590 KDFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTV 647
+D +S + P + L E++ ++L R+ L E+V Q+EA +A++ +
Sbjct: 478 EDIADVVSMTTGVPVSNLTEAETEKLL---------RMEAVLHERVVGQEEAVTALSKAI 528
Query: 648 TQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
+ + G +R AGS +F+GP VGK +++ AL+E + + ++ E
Sbjct: 529 RRSRSGLKDPKRPAGS-----FIFLGPSGVGKTELSKALAEFLFNSEDALLSFDMSEYME 583
Query: 707 EPEV-RVRGK----TALDKIGE---AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
+ V R+ G D+ G+ AV++ P+SV+L ++I++A V + + +E GRL
Sbjct: 584 KHSVSRLVGSPPGYVGFDEGGQLTKAVRQRPYSVVLFDEIEKAHPDVFNILLQILEEGRL 643
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR + N + I+T++
Sbjct: 644 TDAQGRTVDFRNAVIIMTSN 663
>gi|67921848|ref|ZP_00515365.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
gi|67856440|gb|EAM51682.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
Length = 789
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 27/190 (14%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG--NGKRR 658
P N+L E++++ S L +L +K+ Q A AV+ + + ++G N KR
Sbjct: 455 PVNQLTETESE---------SLMYLEDNLHKKIIGQDAAVEAVSRAIRRARIGLQNPKRP 505
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR----- 713
A +F GP VGK ++ AL+E + G+ MI L ++ EP+ +
Sbjct: 506 IAS------FIFAGPTGVGKTELTKALAEFLFGSKDAMIRL-DMSEYMEPQTVSKLIGTA 558
Query: 714 ----GKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLG 769
G ++ EAV+R P+SV+L ++I++A V + + +E GRL DS GR +
Sbjct: 559 PGFVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFR 618
Query: 770 NVIFILTADW 779
N + I+T++
Sbjct: 619 NTLVIMTSNL 628
>gi|402698425|ref|ZP_10846404.1| ATP-dependent chaperone protein ClpB [Pseudomonas fragi A22]
Length = 855
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 99/188 (52%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRR 658
P +K+ E + D+L K ++SL+ E+V Q EA AV+ V + + G + R
Sbjct: 548 PVSKMLEGERDKLMK----------MESLLHERVIGQDEAVVAVSNAVRRSRAGLSDPNR 597
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK-- 715
+GS +F+GP VGK ++ AL+E + M+ + E+ V R+ G
Sbjct: 598 PSGS-----FMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPP 652
Query: 716 --TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
++ G EAV+R P+SVILL+++++A V + + +E GRL DS+GR + N
Sbjct: 653 GYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRN 712
Query: 771 VIFILTAD 778
+ ++T++
Sbjct: 713 TVIVMTSN 720
>gi|377832293|ref|ZP_09815255.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
mucosae LM1]
gi|377553929|gb|EHT15646.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
mucosae LM1]
Length = 832
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 23/217 (10%)
Query: 612 QLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLF 670
QLQK + D L + L ++V Q EA SA+A ++ + + G R GS +F
Sbjct: 504 QLQKT-ESDRLINLERVLHQRVIGQDEAVSAIARSIRRARSGLKDPNRPIGS-----FMF 557
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-----VRGKTALDKIG--- 722
+GP VGK ++A AL+E + G+ MI + E+ V G D+ G
Sbjct: 558 LGPTGVGKTELAKALAEAMFGSENNMIRVDMSEYMEKYSVSRLIGAAPGYVGYDEGGQLT 617
Query: 723 EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT----AD 778
E V+++P+SV+LL++ ++A V + + ++ G L DS GR + N I I+T A
Sbjct: 618 EKVRQHPYSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDSKGRRVDFRNTILIMTSNLGAT 677
Query: 779 WLPD--SLKFLSQGITLDEKKLTSLASGEWQLRLSIR 813
L D ++ F + +T D + ++ A+ + QL+L R
Sbjct: 678 QLQDEKTVGFGAADMTADYQAMS--AAIKQQLKLHFR 712
>gi|379734094|ref|YP_005327599.1| putative ATP-dependent Clp protease ATP-binding subunit
[Blastococcus saxobsidens DD2]
gi|378781900|emb|CCG01552.1| Putative ATP-dependent Clp protease ATP-binding subunit
[Blastococcus saxobsidens DD2]
Length = 842
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L +++ Q+EA +V+ + + + G RR GS +F GP VGK ++A
Sbjct: 505 RMEDELHKRIIGQEEAIKSVSQAIRRTRAGLKDPRRPGGS-----FIFAGPSGVGKTELA 559
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVIL 734
AL++ + G +I + H++ V R+ G D+ G E V+R PFSV+L
Sbjct: 560 KALAQFLFGEDDALIQIDMGEFHDKFTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVVL 619
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
++I++A V + + +E GRL D GR + N I ILT +
Sbjct: 620 FDEIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNL 664
>gi|153003502|ref|YP_001377827.1| ATPase [Anaeromyxobacter sp. Fw109-5]
gi|152027075|gb|ABS24843.1| ATPase AAA-2 domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 890
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 25/183 (13%)
Query: 620 DSFKRLL---KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDR 675
+ +RLL ++L ++V Q+EA AV+ V + + G R G+ LF+GP
Sbjct: 556 EEMQRLLEMERALEKRVVGQEEALRAVSEAVRRARTGLKDPSRPIGT-----FLFLGPTG 610
Query: 676 VGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR------------VRGKTALDKIGE 723
VGK + A AL+E + MI R D E + R G K+ E
Sbjct: 611 VGKTETARALAEYLFNDEEAMI----RFDMSEFQERHTVSRLVGAPPGYVGYEEAGKLTE 666
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDS 783
AV+R P+SV+L ++I++A V + + M+ GRL D+ GR +S N I +LT++ D+
Sbjct: 667 AVRRRPYSVLLFDEIEKAHPDVFNVLLQLMDDGRLTDAKGRTVSFKNTIVVLTSNVGADA 726
Query: 784 LKF 786
L +
Sbjct: 727 LAY 729
>gi|147676618|ref|YP_001210833.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
gi|146272715|dbj|BAF58464.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
Length = 810
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 17/183 (9%)
Query: 615 KPLDPDSFKRLLKS---LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLF 670
K L + +RLLK L ++V Q EA AV+ + + + G +R GS +F
Sbjct: 490 KKLAEEESERLLKMEEVLHQRVVGQDEAIRAVSRAIRRARAGLKDPKRPIGS-----FIF 544
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIG 722
+GP VGK ++A AL+E++ G+ M+ + E+ V G ++
Sbjct: 545 LGPTGVGKTELARALAEVLFGSEDAMVRIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLT 604
Query: 723 EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPD 782
EAV+R P++V+LL++I++A V + + ME GRL D+ GR + N + I+T++
Sbjct: 605 EAVRRRPYTVVLLDEIEKAHPDVFNILLQVMEDGRLTDAKGRTVDFRNTVIIMTSNVGIQ 664
Query: 783 SLK 785
++K
Sbjct: 665 TIK 667
>gi|325282967|ref|YP_004255508.1| ATP-dependent chaperone ClpB [Deinococcus proteolyticus MRP]
gi|324314776|gb|ADY25891.1| ATP-dependent chaperone ClpB [Deinococcus proteolyticus MRP]
Length = 852
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 27/222 (12%)
Query: 582 EKTHIEPVKDFLGCISSE---PPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
E H E ++ + + S P +KL E + ++L L L +V Q+
Sbjct: 515 EFAHTEVTEEDIASVVSRWTGIPVSKLMEGEREKLLH---------LEDQLHRRVIGQER 565
Query: 639 AASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMI 697
A ++VA T+ + + G N R GS +F+GP VGK ++A AL+E + +S M+
Sbjct: 566 AIASVADTIRRARAGLNDPNRPLGS-----FMFLGPTGVGKTELAKALAEFLFDSSDAMV 620
Query: 698 PLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNI 749
+ E+ V G ++ EAV+R P+SVILL++I++A V +
Sbjct: 621 RIDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNVL 680
Query: 750 KRAMERGRLVDSYGREISLGNVIFILTADW-LPDSLKFLSQG 790
+ ++ GRL D GR + N + ILT++ P L+ +QG
Sbjct: 681 LQVLDDGRLTDGQGRTVDFRNTLIILTSNIGSPLILEMQAQG 722
>gi|393764456|ref|ZP_10353066.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Alishewanella agri BL06]
gi|392604585|gb|EIW87486.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Alishewanella agri BL06]
Length = 859
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 23/194 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRG 659
P NK+ E + D+L R+ +L KV QQEA SAVA + + + G +
Sbjct: 547 PVNKMLEGERDKLL---------RMEDALHAKVVGQQEAVSAVANAIRRSRAGLADPNKP 597
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK--- 715
GS LF+GP VGK ++ AL++ + + M+ + E+ V R+ G
Sbjct: 598 IGS-----FLFLGPTGVGKTELTKALAQFLFDSPDAMVRIDMSEFMEKHAVSRLVGAPPG 652
Query: 716 -TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
++ G EAV+R P+SVILL+++++A V + + ++ GRL D GR + N
Sbjct: 653 YVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNA 712
Query: 772 IFILTADWLPDSLK 785
+ I+T++ D ++
Sbjct: 713 VIIMTSNLGSDLIQ 726
>gi|238064496|ref|ZP_04609205.1| ATPase [Micromonospora sp. ATCC 39149]
gi|237886307|gb|EEP75135.1| ATPase [Micromonospora sp. ATCC 39149]
Length = 850
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGK 678
D RL L +KV Q +A AVA V + + G R GS LF+GP VGK
Sbjct: 523 DRLLRLEGHLHQKVVGQDDAVGAVAEAVRRSRTGLADPNRPMGS-----FLFLGPTGVGK 577
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPF 730
++ AL+E + G + M+ L E V G ++ EAV+R P+
Sbjct: 578 TELGRALAEALFGEADRMVRLDMSEFQERHTVARLVGAPPGYVGYEEAGQLTEAVRRRPY 637
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+V+LL++I++A V + + ++ GRL DS GR ++ N + I+T++
Sbjct: 638 AVVLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSN 685
>gi|431751971|ref|ZP_19540657.1| chaperone ClpB [Enterococcus faecium E2620]
gi|430614580|gb|ELB51560.1| chaperone ClpB [Enterococcus faecium E2620]
Length = 869
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHSDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|417983425|ref|ZP_12624063.1| ClpB family protein [Lactobacillus casei 21/1]
gi|410528371|gb|EKQ03224.1| ClpB family protein [Lactobacillus casei 21/1]
Length = 868
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L +L ++V Q EA SAV+ V + + G R GS LF+GP V
Sbjct: 557 DRQKLLHLADNLQQRVIGQNEAVSAVSDAVLRSRAGLQDPSRPLGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 612 GKTELAKALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEQGGQLTEAVRRN 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++++LL++I++A+ V + + ++ GRL D GR + N I I+T++
Sbjct: 672 PYTIVLLDEIEKANPDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSN 721
>gi|389816088|ref|ZP_10207275.1| Class III stress response-related ATPase, ClpC [Planococcus
antarcticus DSM 14505]
gi|388465352|gb|EIM07670.1| Class III stress response-related ATPase, ClpC [Planococcus
antarcticus DSM 14505]
Length = 818
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +KL ++++D+L L+ ++ L +V Q EA ++++ + + + G +R
Sbjct: 487 PVSKLAQTESDKL---LNLEAI------LHNRVIGQDEAVTSISKAIRRARAGLKDPKRP 537
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + G MI R D E R
Sbjct: 538 IGS-----FIFLGPTGVGKTELARALAESMFGDEDAMI----RIDMSEYMERHSTSRLVG 588
Query: 712 ----VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREIS 767
G ++ E V+R P+SVILL++I++A V + + +E GRL DS GR +
Sbjct: 589 SPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRRVD 648
Query: 768 LGNVIFILTADWLPDSLKFLSQ-GITLDEKK 797
N + I+T++ + LK+ G LD+ K
Sbjct: 649 FRNTVIIMTSNVGAEELKYNKYVGFNLDDAK 679
>gi|75906365|ref|YP_320661.1| ATPase [Anabaena variabilis ATCC 29413]
gi|75700090|gb|ABA19766.1| ATPase [Anabaena variabilis ATCC 29413]
Length = 876
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ +L + L L ++V QQEA AV+ + + + G R
Sbjct: 556 PVNRLLESERQKLLQ---------LESHLHQRVIGQQEAVEAVSAAIRRARAGMKDPNRP 606
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LFMGP VGK ++A AL++ + + ++ L E+ V
Sbjct: 607 IGS-----FLFMGPTGVGKTELARALAQFLFDSDDALVRLDMSEYMEKHSVSRLVGAPPG 661
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R+P+SV+LL+++++A V + + ++ GR+ DS GR + N
Sbjct: 662 YVGYEEGGQLSEAVRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFRNT 721
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 722 VIVMTSN 728
>gi|239825665|ref|YP_002948289.1| ATPase AAA [Geobacillus sp. WCH70]
gi|239805958|gb|ACS23023.1| ATPase AAA-2 domain protein [Geobacillus sp. WCH70]
Length = 811
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 27/209 (12%)
Query: 589 VKDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
V+D +SS P +KL +++ ++L K L + L +V Q EA AVA
Sbjct: 474 VEDIAMVVSSWTGIPVSKLAQTETERLLK---------LEEILHSRVVGQDEAVKAVAKA 524
Query: 647 VTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDH 705
V + + G +R GS +F+GP VGK ++A AL+E + G +I + ++
Sbjct: 525 VRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAEAMFGDEDALIRI-DMSEY 578
Query: 706 EEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERG 756
E R G ++ G E V+R P+SV+LL+++++A V + + +E G
Sbjct: 579 MEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDG 638
Query: 757 RLVDSYGREISLGNVIFILTADWLPDSLK 785
RL DS GR + N I I+T++ D+LK
Sbjct: 639 RLTDSKGRTVDFRNTIIIMTSNVGADALK 667
>gi|348680558|gb|EGZ20374.1| hypothetical protein PHYSODRAFT_558773 [Phytophthora sojae]
Length = 894
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 18/192 (9%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG---NGKRRGAGSKGDMWLLFMGPDRV 676
D L + + ++V Q+EA AV V + + G +G+ G+ LF+GP V
Sbjct: 561 DRLMHLEERIHQRVVGQEEAVKAVCDAVLRSRAGLARSGQPTGS-------FLFLGPTGV 613
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+ + M+ + EE V G ++ EAV+RN
Sbjct: 614 GKTELAKALAYELFDDDKHMVRIDMSEYMEEHTVSRLIGSPPGYIGHEEGGQLTEAVRRN 673
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLS 788
P++VIL+++I++A V + + ++ GRL DS+GR + N + I+T++ + L F +
Sbjct: 674 PYNVILMDEIEKAHPKVLNILLQVLDDGRLTDSHGRTVDFANTVVIMTSNIGAEHLLFEN 733
Query: 789 QGITLDEKKLTS 800
+ KK+ +
Sbjct: 734 DPLMRASKKIKT 745
>gi|239623567|ref|ZP_04666598.1| ATPase AAA-2 domain-containing protein [Clostridiales bacterium
1_7_47_FAA]
gi|239521598|gb|EEQ61464.1| ATPase AAA-2 domain-containing protein [Clostridiales bacterium
1_7_47FAA]
Length = 876
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 26/208 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++++L L L E+V Q+EA +A++ + + ++G R
Sbjct: 491 PVRKLAEEESERLMN---------LEGILHERVVGQEEAVTAISKAIRRGRVGLKDPGRP 541
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ ALSE + G +I + E+ V G
Sbjct: 542 IGS-----FLFLGPTGVGKTELSKALSEAMFGTENALIRVDMSEYMEKHSVSKMIGSPPG 596
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+RNP+SVIL ++I++A V + + ++ G + D+ GR+I N
Sbjct: 597 YVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKIDFKNT 656
Query: 772 IFILTADWLPDSL---KFLSQGITLDEK 796
I I+T++ +++ K L G+T D K
Sbjct: 657 IIIMTSNAGAENIISPKRLGFGMTSDAK 684
>gi|188584788|ref|YP_001916333.1| ATPase AAA [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349475|gb|ACB83745.1| ATPase AAA-2 domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 814
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 17/176 (9%)
Query: 615 KPLDPDSFKRLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLF 670
K L + +RLL +L ++V Q+EA +V+ + + + G +R GS +F
Sbjct: 497 KRLAQEETERLLNMEDALHQRVVGQEEAVQSVSNAIRRARSGLKDPKRPIGS-----FIF 551
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIG 722
+GP VGK ++A AL++++ G MI L E+ V G ++
Sbjct: 552 LGPTGVGKTELARALADVLFGDEDAMIRLDMSEYMEKHTVSRLLGSPPGYVGHEESGQLT 611
Query: 723 EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
E V+R P+SVILL++I++A V + + +E GRL D+ GR + N + I+T++
Sbjct: 612 EKVRRRPYSVILLDEIEKAHPEVFNTLLQVLEDGRLTDAKGRTVDFRNTVIIMTSN 667
>gi|153006164|ref|YP_001380489.1| ATPase [Anaeromyxobacter sp. Fw109-5]
gi|152029737|gb|ABS27505.1| ATPase AAA-2 domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 935
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 15/180 (8%)
Query: 617 LDPDSFKRLLK---SLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGP 673
L + +RLL+ L ++V Q EA AV+ V + G RR + F+GP
Sbjct: 582 LTTEERERLLQMEERLHQRVIGQDEAVHAVSEAVRLARAGLKDRR----RPVATFFFLGP 637
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAV 725
VGK ++A AL+ELV G M+ + E V G ++ E V
Sbjct: 638 TGVGKTELARALAELVFGDEDAMVRIDMSEYMERHTVARLIGAPPGYVGYEEGGQLTERV 697
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+R P+SVILL++ ++A + V+ + + +E GRL D GR + N I I T++ D ++
Sbjct: 698 RRKPYSVILLDEFEKAHLDVQNVLLQVLEDGRLTDGKGRVVDFANAIIIATSNIGSDLIQ 757
>gi|384106660|ref|ZP_10007567.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
imtechensis RKJ300]
gi|383833996|gb|EID73446.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
imtechensis RKJ300]
Length = 808
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +++ E + ++L +RL L +V Q +A A+A V + + G N R
Sbjct: 488 PASQMTEEEKERL---------RRLEDELHRRVIGQDDAVRAIARAVRRSRTGMNDPDRP 538
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+ + G M+ L E V
Sbjct: 539 VGS-----FLFLGPTGVGKTELAKALAATLFGDENKMLRLDMSEFGERHTVSRLVGAPPG 593
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+SVILL++I++A V + + ++ GRL D GR + N
Sbjct: 594 YVGYGEAGQLTEQVRRNPYSVILLDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNT 653
Query: 772 IFILTADWLPD-------SLKFLSQGITLDEKKLTSLASGEWQLRLSIR 813
+ I+T++ D +L F + EK L G +LR S+R
Sbjct: 654 VLIMTSNLGSDIISSKSGALGFSTGDAEASEKPLRDRVMG--RLRESMR 700
>gi|296125907|ref|YP_003633159.1| ATPase AAA [Brachyspira murdochii DSM 12563]
gi|296017723|gb|ADG70960.1| ATPase AAA-2 domain protein [Brachyspira murdochii DSM 12563]
Length = 828
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 102/197 (51%), Gaps = 18/197 (9%)
Query: 595 CISSEPPQNKLHESQNDQLQKPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCK 651
I + ++ + E N +++ L+ +S KRL+ L +KV Q+EA ++++ + + +
Sbjct: 479 YIEEDDIRHVISEITNIPIKRLLNSES-KRLIGMEDELHQKVVGQKEAIASISRAIRRSR 537
Query: 652 LG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV 710
G +R GS +F+GP VGK +A LSE + G S +I + E+ V
Sbjct: 538 AGLKTSKRPLGS-----FIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAV 592
Query: 711 -RVRG-------KTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSY 762
R+ G + E V+R P+S+IL ++I++A V + + +E G+L D++
Sbjct: 593 SRLIGAPPGYVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNF 652
Query: 763 GREISLGNVIFILTADW 779
GR++ N I I+T++
Sbjct: 653 GRKVDFSNTIIIITSNL 669
>gi|297733886|emb|CBI15133.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + L + L ++V Q +A SAVA V + + G G+ ++ GS LF+GP V
Sbjct: 526 DKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPTGS-----FLFLGPTGV 580
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+E + +++ + E+ V G ++ EAV+R
Sbjct: 581 GKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHDEGGQLTEAVRRR 640
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
P+SV+L +++++A + V + + ++ GRL D GR + N + I+T++ + L
Sbjct: 641 PYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVIIMTSNLGAEHL 696
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 36/144 (25%)
Query: 22 HSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALE 81
H +A S H Q TPLHVA L+ P+G LRQA I + N ++E F+ AL+
Sbjct: 18 HELAMNS--GHAQLTPLHVAVALITDPNGILRQAIIGAGGNEE---AANSVERVFNKALK 72
Query: 82 RLPTAQQNVSPGLDPPISNALMAALKRAQAHQRRGCPEQQQQPLLAVKVELEQLIISILD 141
+LP+ Q+ R H LAV +QLI+ +L+
Sbjct: 73 KLPSQTQSSQKS--------------RGDTH-------------LAV----DQLILGLLE 101
Query: 142 DPSVSRVMREASFSSPAVKATIEQ 165
D + +++EA S+ VK+ +E+
Sbjct: 102 DSQIGDLLKEAGVSTSRVKSEVEK 125
>gi|59805048|gb|AAX08108.1| heat shock protein 101 [Vitis vinifera]
Length = 911
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + L + L ++V Q +A SAVA V + + G G+ ++ GS LF+GP V
Sbjct: 556 DKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPTGS-----FLFLGPTGV 610
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+E + +++ + E+ V G ++ EAV+R
Sbjct: 611 GKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHDEGGQLTEAVRRR 670
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
P+SV+L +++++A + V + + ++ GRL D GR + N + I+T++ + L
Sbjct: 671 PYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVIIMTSNLGAEHL 726
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 19/145 (13%)
Query: 22 HSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALE 81
H +A S H Q TPLHVA L+ +G LRQA I + N ++E F+ AL+
Sbjct: 18 HELAMNS--GHAQLTPLHVAVALITDHNGILRQAIIGAGGNEE---AANSVERVFNKALK 72
Query: 82 RLPTAQQNVSPGLDPPISNALMAALKRAQAHQR-RGCPEQQQQPLLAVKVELEQLIISIL 140
+LPT P + P+S L+ ++RAQ+ Q+ RG LAV +QLI+ +L
Sbjct: 73 KLPTQS---PPPDEIPVSTTLIKVVRRAQSSQKSRGDTH------LAV----DQLILGLL 119
Query: 141 DDPSVSRVMREASFSSPAVKATIEQ 165
+D + +++EA S+ VK+ +E+
Sbjct: 120 EDSQIGDLLKEAGVSTSRVKSEVEK 144
>gi|417989608|ref|ZP_12630110.1| ClpB family protein [Lactobacillus casei A2-362]
gi|410537701|gb|EKQ12271.1| ClpB family protein [Lactobacillus casei A2-362]
Length = 868
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L +L ++V Q EA SAV+ V + + G R GS LF+GP V
Sbjct: 557 DRQKLLHLADNLHQRVIGQNEAVSAVSDAVLRSRAGLQDPSRPLGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 612 GKTELAKALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEQGGQLTEAVRRN 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++++LL++I++A+ V + + ++ GRL D GR + N I I+T++
Sbjct: 672 PYTIVLLDEIEKANPDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSN 721
>gi|397735024|ref|ZP_10501727.1| negative regulator of genetic competence clpC/mecB [Rhodococcus sp.
JVH1]
gi|396929249|gb|EJI96455.1| negative regulator of genetic competence clpC/mecB [Rhodococcus sp.
JVH1]
Length = 807
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +++ E + ++L +RL L +V Q +A A+A V + + G N R
Sbjct: 487 PASQMTEEEKERL---------RRLEDELHRRVIGQDDAVRAIARAVRRSRTGMNDPDRP 537
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+ + G M+ L E V
Sbjct: 538 VGS-----FLFLGPTGVGKTELAKALAATLFGDENKMLRLDMSEFGERHTVSRLVGAPPG 592
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+SVILL++I++A V + + ++ GRL D GR + N
Sbjct: 593 YVGYGEAGQLTEQVRRNPYSVILLDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNT 652
Query: 772 IFILTADWLPD-------SLKFLSQGITLDEKKLTSLASGEWQLRLSIR 813
+ I+T++ D +L F + EK L G +LR S+R
Sbjct: 653 VLIMTSNLGSDIISSKSGALGFSTGDAEASEKPLRDRVMG--RLRESMR 699
>gi|355574810|ref|ZP_09044446.1| ATP-dependent chaperone ClpB [Olsenella sp. oral taxon 809 str.
F0356]
gi|354818286|gb|EHF02778.1| ATP-dependent chaperone ClpB [Olsenella sp. oral taxon 809 str.
F0356]
Length = 872
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRG 659
P +K+ + + D+LQ L L E+V Q EA SAVA+ V + + G R
Sbjct: 550 PVSKMMQGEIDKLQN---------LEAELHERVIGQNEAVSAVASAVRRSRAGLADPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS F+GP VGK ++A AL+E + ++ + E+ V+ G
Sbjct: 601 LGS-----FFFLGPTGVGKTELAKALAECLFDDERALVRIDMSEYMEKFSVQRLIGAPPG 655
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R P+SVILL+++++A V + + ++ GRL D GR +S N
Sbjct: 656 YVGYDEGGQLTEAVRRKPYSVILLDEMEKAHPDVFNILLQVLDDGRLTDGQGRVVSFKNT 715
Query: 772 IFILTAD 778
I I+T++
Sbjct: 716 IIIMTSN 722
>gi|227535160|ref|ZP_03965209.1| S14 family endopeptidase Clp [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187205|gb|EEI67272.1| S14 family endopeptidase Clp [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 868
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L +L ++V Q EA SAV+ V + + G R GS LF+GP V
Sbjct: 557 DRQKLLHLADNLHQRVIGQNEAVSAVSDAVLRSRAGLQDPSRPLGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 612 GKTELAKALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEQGGQLTEAVRRN 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++++LL++I++A+ V + + ++ GRL D GR + N I I+T++
Sbjct: 672 PYTIVLLDEIEKANPDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSN 721
>gi|373465528|ref|ZP_09556986.1| ATP-dependent chaperone protein ClpB [Lactobacillus kisonensis
F0435]
gi|371760187|gb|EHO48883.1| ATP-dependent chaperone protein ClpB [Lactobacillus kisonensis
F0435]
Length = 865
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
RL +L ++V Q A +AV+ V + + G R GS LF+GP VGK ++A
Sbjct: 563 RLADNLHQRVIGQDAAVTAVSDAVIRSRAGLQDPSRPLGS-----FLFLGPTGVGKTELA 617
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRNPFSVIL 734
AL+E + + M+ + E+ V A +G EAV+RNP++++L
Sbjct: 618 KALAEDLFDSENHMVRIDMSEYMEKESVSRLVGAAPGYVGYEEGGQLTEAVRRNPYTIVL 677
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
++I++A V + + ++ GRL DS GR I N I I+T++ D L
Sbjct: 678 FDEIEKAHPDVFNILLQVLDDGRLTDSQGRTIDFKNTILIMTSNLGSDIL 727
>gi|239618401|ref|YP_002941723.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
gi|239507232|gb|ACR80719.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
Length = 828
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 25/180 (13%)
Query: 615 KPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLF 670
K L+ +RLL ++L +++ Q EA +AVA + + + G RR G+ LF
Sbjct: 498 KKLEQSDSERLLSLEEALHKRIVGQDEAITAVAKAIRRARSGLKDPRRPIGT-----FLF 552
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKI 721
+GP VGK ++A AL+E + G ++ R D E R G D+
Sbjct: 553 LGPTGVGKTELAKALAEYLFGDEKALV----RFDMSEYMERFSVSRLIGAPPGYVGYDEG 608
Query: 722 G---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
G E +++ PFS+IL ++I++A + + + M+ GRL DS GR + N I I+T++
Sbjct: 609 GTLTERIRKRPFSIILFDEIEKAHFDIFNLLLQIMDDGRLTDSQGRSVDFKNTIVIMTSN 668
>gi|191638350|ref|YP_001987516.1| Chaperone ClpB [Lactobacillus casei BL23]
gi|385820051|ref|YP_005856438.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Lactobacillus
casei LC2W]
gi|385823252|ref|YP_005859594.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Lactobacillus
casei BD-II]
gi|409997215|ref|YP_006751616.1| chaperone protein ClpB [Lactobacillus casei W56]
gi|190712652|emb|CAQ66658.1| Chaperone ClpB [Lactobacillus casei BL23]
gi|327382378|gb|AEA53854.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Lactobacillus
casei LC2W]
gi|327385579|gb|AEA57053.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Lactobacillus
casei BD-II]
gi|406358227|emb|CCK22497.1| Chaperone protein ClpB [Lactobacillus casei W56]
Length = 868
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L +L ++V Q EA SAV+ V + + G R GS LF+GP V
Sbjct: 557 DRQKLLHLADNLHQRVIGQNEAVSAVSDAVLRSRAGLQDPSRPLGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 612 GKTELAKALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEQGGQLTEAVRRN 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++++LL++I++A+ V + + ++ GRL D GR + N I I+T++
Sbjct: 672 PYTIVLLDEIEKANPDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSN 721
>gi|438000238|ref|YP_007183971.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|451812776|ref|YP_007449229.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429339472|gb|AFZ83894.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|451778745|gb|AGF49625.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 861
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 90/160 (56%), Gaps = 14/160 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L ++ Q EA +AV+ ++ + + G + + R +GS LF+GP VGK ++A AL++
Sbjct: 569 LSSRIIGQSEAVNAVSDSILRARAGLSDQSRPSGS-----FLFLGPTGVGKTELAKALAD 623
Query: 688 LVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVILLEDID 739
+ + MI + E+ V R+ G ++ G EAV+R P+SV+LL++++
Sbjct: 624 FMFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVE 683
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
+A + V + + ++ GRL DS+GR + N I I+T++
Sbjct: 684 KAHLDVFNVLLQVLDDGRLTDSHGRTVDFRNTIIIMTSNL 723
>gi|4587717|gb|AAD25872.1|AF027500_2 ATP-dependent Clp protease regulatory subunit [Aquifex pyrophilus]
Length = 631
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P ++HES D + + + L ++V Q EA AVA + + ++G GK R
Sbjct: 418 PVKRVHES---------DAEKLLHIEEELKKRVIGQDEAIKAVAKAIRRSRVGLKGKHRP 468
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
G +F+GP VGK + A AL+E + G +I E+ V
Sbjct: 469 IGV-----FMFLGPTGVGKTETAKALAEYLFGTEDALIRFDMSEYMEKHTVSRLIGAPPG 523
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P+SV+L ++I++A V + + GRL D GR + N
Sbjct: 524 YVGYEEGGQLTEAVRRRPYSVLLFDEIEKAHPDVFNVFLQIFDDGRLTDGLGRTVDFSNT 583
Query: 772 IFILTAD 778
I I+T++
Sbjct: 584 IIIMTSN 590
>gi|410638111|ref|ZP_11348676.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
lipolytica E3]
gi|410142308|dbj|GAC15881.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
lipolytica E3]
Length = 856
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 23/218 (10%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NK+ E + D+L R+ +SL +V Q EA +AV+ + + + G + R
Sbjct: 547 PVNKMLEGEKDKLL---------RMEESLQNRVIGQTEAVNAVSNAIRRSRAGLSDPNRP 597
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK--- 715
GS LF+GP VGK ++ AL+ + M+ + E+ V R+ G
Sbjct: 598 IGS-----FLFLGPTGVGKTELCKALAGFMFDTEQAMVRIDMSEFMEKHAVSRLVGAPPG 652
Query: 716 -TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
++ G EAV+R P+SVILL+++++A V + + ++ GRL D GR + N
Sbjct: 653 YVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNT 712
Query: 772 IFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLR 809
+ I+T++ D ++ Q +E K + + E Q R
Sbjct: 713 VIIMTSNIGSDVIQDKHQESQYEEMKELVMRTVEQQFR 750
>gi|419962408|ref|ZP_14478400.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
opacus M213]
gi|414572161|gb|EKT82862.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
opacus M213]
Length = 808
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +++ E + ++L +RL L +V Q +A A+A V + + G N R
Sbjct: 488 PASQMTEEEKERL---------RRLEDELHRRVIGQDDAVRAIARAVRRSRTGMNDPDRP 538
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+ + G M+ L E V
Sbjct: 539 VGS-----FLFLGPTGVGKTELAKALAATLFGDENKMLRLDMSEFGERHTVSRLVGAPPG 593
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+SVILL++I++A V + + ++ GRL D GR + N
Sbjct: 594 YVGYGEAGQLTEQVRRNPYSVILLDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNT 653
Query: 772 IFILTADWLPD-------SLKFLSQGITLDEKKLTSLASGEWQLRLSIR 813
+ I+T++ D +L F + EK L G +LR S+R
Sbjct: 654 VLIMTSNLGSDIISSKSGALGFSTGDAEASEKPLRDRVMG--RLRESMR 700
>gi|134103380|ref|YP_001109041.1| Clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
gi|291004401|ref|ZP_06562374.1| Clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
gi|133916003|emb|CAM06116.1| clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
Length = 828
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 31/191 (16%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRG 659
P +L ES+ ++L K L ++L E+V Q+EA +AVA V + G G R
Sbjct: 513 PVAQLTESEKERLLK---------LEEALHERVVGQEEAVTAVAEAVRRSLAGMGDPDRP 563
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+ L+ G ++ R D E + R
Sbjct: 564 VGS-----FLFLGPTGVGKTELAKALAGLLFGDEDRLV----RFDMSEFQERHTVSRLVG 614
Query: 712 ----VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREIS 767
G ++ E V+R P+SV+L ++I++A V + + ++ GRL D+ GR +
Sbjct: 615 APPGYVGHEEAGQLTERVRRQPYSVLLFDEIEKAHQDVFNALLQVLDDGRLTDAQGRTVD 674
Query: 768 LGNVIFILTAD 778
N + I+T++
Sbjct: 675 FRNTVVIMTSN 685
>gi|432342737|ref|ZP_19591978.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
wratislaviensis IFP 2016]
gi|430772220|gb|ELB88007.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
wratislaviensis IFP 2016]
Length = 790
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +++ E + ++L +RL L +V Q +A A+A V + + G N R
Sbjct: 470 PASQMTEEEKERL---------RRLEDELHRRVIGQDDAVRAIARAVRRSRTGMNDPDRP 520
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+ + G M+ L E V
Sbjct: 521 VGS-----FLFLGPTGVGKTELAKALAATLFGDENKMLRLDMSEFGERHTVSRLVGAPPG 575
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+SVILL++I++A V + + ++ GRL D GR + N
Sbjct: 576 YVGYGEAGQLTEQVRRNPYSVILLDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNT 635
Query: 772 IFILTADWLPD 782
+ I+T++ D
Sbjct: 636 VLIMTSNLGSD 646
>gi|260433267|ref|ZP_05787238.1| negative regulator of genetic competence ClpC/mecB [Silicibacter
lacuscaerulensis ITI-1157]
gi|260417095|gb|EEX10354.1| negative regulator of genetic competence ClpC/mecB [Silicibacter
lacuscaerulensis ITI-1157]
Length = 940
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
+ D +L + L E+V Q+EA +AVA V + G R G+G LF+GP VG
Sbjct: 598 EKDKLLKLEERLHERVIGQEEAIAAVADAVRLAR--AGLREGSGPTA--TFLFLGPTGVG 653
Query: 678 KKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRN 728
K ++A L+E++ G ++ + ++ E R G D+ G E V+R
Sbjct: 654 KTELAKTLAEVIFGDEDALLRI-DMSEYGERHAVARLVGAPPGYVGYDEGGQLTEKVRRR 712
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
P+SV+LL++I++A V + + + GRL D GR + N I I T++ D ++
Sbjct: 713 PYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQ 769
>gi|26987361|ref|NP_742786.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida KT2440]
gi|54035836|sp|Q88Q71.1|CLPB_PSEPK RecName: Full=Chaperone protein ClpB
gi|24982014|gb|AAN66250.1|AE016253_5 ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida KT2440]
Length = 854
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 32/233 (13%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +TD L R+KV E+ E V + G P K+ E + ++L
Sbjct: 510 ERSLQMVDQHGKTDNQLLRNKV----TEEEIAEVVSKWTGI-----PVAKMLEGEREKLL 560
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K + + L ++V Q EA +AVA V + + G + R +GS LF+GP
Sbjct: 561 K---------MEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGS-----FLFLGP 606
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAV 725
VGK ++ AL+E + M+ + E+ V R+ G ++ G EAV
Sbjct: 607 TGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAV 666
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SV+LL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 667 RRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
>gi|253681670|ref|ZP_04862467.1| negative regulator of genetic competence ClpC/MecB [Clostridium
botulinum D str. 1873]
gi|253561382|gb|EES90834.1| negative regulator of genetic competence ClpC/MecB [Clostridium
botulinum D str. 1873]
Length = 813
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 23/190 (12%)
Query: 598 SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGK 656
S P KL E + D+L K L + L ++V Q EA +++ V + ++G
Sbjct: 488 SNVPIEKLTEKEADRLLK---------LEEILHKRVIGQNEAVKSISKAVRRARVGLKDP 538
Query: 657 RRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR----- 711
+R GS +F+GP VGK +++ AL+E + G MI + E+ V
Sbjct: 539 KRPIGS-----FIFLGPTGVGKTELSKALAEAMFGDENNMIRIDMSEYMEKHAVSRLVGS 593
Query: 712 ---VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISL 768
G ++ E V+RNP+SV+L ++I++A V + + +E GRL DS G+ +
Sbjct: 594 PPGYVGHDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDSKGKTVDF 653
Query: 769 GNVIFILTAD 778
N I ILT++
Sbjct: 654 RNTIIILTSN 663
>gi|239631565|ref|ZP_04674596.1| chaperone ClpB [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301066405|ref|YP_003788428.1| chaperone ClpB [Lactobacillus casei str. Zhang]
gi|417996214|ref|ZP_12636497.1| ClpB family protein [Lactobacillus casei M36]
gi|417999048|ref|ZP_12639261.1| ClpB family protein [Lactobacillus casei T71499]
gi|418001986|ref|ZP_12642113.1| ClpB family protein [Lactobacillus casei UCD174]
gi|418005058|ref|ZP_12645058.1| ClpB family protein [Lactobacillus casei UW1]
gi|418007950|ref|ZP_12647821.1| ClpB family protein [Lactobacillus casei UW4]
gi|418010808|ref|ZP_12650579.1| ClpB family protein [Lactobacillus casei Lc-10]
gi|418013701|ref|ZP_12653338.1| ClpB family protein [Lactobacillus casei Lpc-37]
gi|239526030|gb|EEQ65031.1| chaperone ClpB [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300438812|gb|ADK18578.1| Chaperone ClpB [Lactobacillus casei str. Zhang]
gi|410535923|gb|EKQ10533.1| ClpB family protein [Lactobacillus casei M36]
gi|410539988|gb|EKQ14510.1| ClpB family protein [Lactobacillus casei T71499]
gi|410545137|gb|EKQ19442.1| ClpB family protein [Lactobacillus casei UCD174]
gi|410547709|gb|EKQ21935.1| ClpB family protein [Lactobacillus casei UW4]
gi|410548055|gb|EKQ22275.1| ClpB family protein [Lactobacillus casei UW1]
gi|410553387|gb|EKQ27390.1| ClpB family protein [Lactobacillus casei Lc-10]
gi|410555580|gb|EKQ29518.1| ClpB family protein [Lactobacillus casei Lpc-37]
Length = 868
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L +L ++V Q EA SAV+ V + + G R GS LF+GP V
Sbjct: 557 DRQKLLHLADNLHQRVIGQNEAVSAVSDAVLRSRAGLQDPSRPLGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 612 GKTELAKALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEQGGQLTEAVRRN 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++++LL++I++A+ V + + ++ GRL D GR + N I I+T++
Sbjct: 672 PYTIVLLDEIEKANPDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSN 721
>gi|153011782|ref|YP_001372995.1| ATPase [Ochrobactrum anthropi ATCC 49188]
gi|151563670|gb|ABS17166.1| ATPase AAA-2 domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 964
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
+ D +L + L E+V Q+EA AVA V + G + RG + LF+GP VG
Sbjct: 606 EKDKLLKLEEKLHERVIGQEEAIRAVADAVRLARAGLREGRGPTA----TFLFLGPTGVG 661
Query: 678 KKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNP 729
K ++A L+E++ G +I + E V R+ G D+ G E V+R P
Sbjct: 662 KTELAKTLAEVIFGDQDAIIRIDMSEYGERHSVARLVGAPPGYVGYDEGGQLTEKVRRRP 721
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+SV+LL++I++A V + + + GRL D GR + N I I T++ D ++
Sbjct: 722 YSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQ 777
>gi|398344325|ref|ZP_10529028.1| ATP-dependent protease ClpA [Leptospira inadai serovar Lyme str.
10]
Length = 856
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L IS + P ++ ES++++L RL L +V Q +A +A V
Sbjct: 496 DILSVISQWTGIPLQRMEESESERLL---------RLEDELKLRVVGQDDAIEKIAKAVR 546
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL++ + G M+ + ++ E
Sbjct: 547 RARTGFKAERRPTGS-----FIFLGPTGVGKTELAKALADFLFGDQDAMLRVD-MSEYME 600
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 601 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKKPYSIILLDEIEKAHHDIFNILLQVMEEGNL 660
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 661 TDTKGRKVNFRDTIIIMTSN 680
>gi|323484656|ref|ZP_08090018.1| hypothetical protein HMPREF9474_01769 [Clostridium symbiosum
WAL-14163]
gi|323402039|gb|EGA94375.1| hypothetical protein HMPREF9474_01769 [Clostridium symbiosum
WAL-14163]
Length = 830
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 17/168 (10%)
Query: 623 KRLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
+RLLK L E+V Q+EA +AV+ + + ++G +R GS LF+GP VGK
Sbjct: 508 ERLLKLESILHERVVGQEEAVTAVSKAIRRGRVGLKDPKRPIGS-----FLFLGPTGVGK 562
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPF 730
+++ ALSE + G MI + E+ V G ++ E V+RNP+
Sbjct: 563 TELSKALSEAMFGTENAMIRVDMSEYMEKHSVSKMIGSPPGYVGYEEGGQLSEKVRRNPY 622
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
SVIL ++I++A V + + ++ G + D+ GR+I N + I+T++
Sbjct: 623 SVILFDEIEKAHPDVFNILLQILDDGHITDAQGRKIDFKNTVLIMTSN 670
>gi|395242717|ref|ZP_10419713.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
pasteurii CRBIP 24.76]
gi|394479965|emb|CCI85953.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
pasteurii CRBIP 24.76]
Length = 740
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
++ V P SP+ TD ++ +K++E EKT+I P ++ + + QLQ
Sbjct: 387 DQKVDPDKSPIITDKIM--NKIVE---EKTNI--------------PVGEIQKQEEAQLQ 427
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
L L +V Q +A VA + + ++G N R GS LF+GP
Sbjct: 428 N---------LASDLKSRVIGQDQAVEKVARAIRRNRIGFNKSGRPIGS-----FLFVGP 473
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAV 725
VGK ++A L+ + G+ MI + E+ V G ++ E V
Sbjct: 474 TGVGKTELAKQLARQMFGSDDAMIRIDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTEQV 533
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ NP+S+ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 534 RHNPYSLILLDEIEKAHPDVMNLFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 586
>gi|373253679|ref|ZP_09541797.1| ATP-dependent Clp protease ATP-binding subunit [Nesterenkonia sp.
F]
Length = 868
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 23/193 (11%)
Query: 595 CISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG- 653
S+ P KL E ++D+L KR+ + L ++V Q+EA +++ + + + G
Sbjct: 491 AFSTGIPVFKLTEQESDRL---------KRMEEELHKRVIGQEEAIKSLSRAIRRTRAGL 541
Query: 654 NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-- 711
R +GS +F GP VGK ++A L+E + G +I L E+ V
Sbjct: 542 KDPNRPSGS-----FIFAGPTGVGKTELAKTLAEFLFGDEDALITLDMSEYSEKHTVSRL 596
Query: 712 ------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGRE 765
G ++ E V+R PFSV+L +++++A + ++ + +E GRL DS GR+
Sbjct: 597 FGAPPGYVGYEEGGQLTEKVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLSDSQGRQ 656
Query: 766 ISLGNVIFILTAD 778
+ N + I+T +
Sbjct: 657 VDFKNTVIIMTTN 669
>gi|111222022|ref|YP_712816.1| ATP-dependent protease [Frankia alni ACN14a]
gi|111149554|emb|CAJ61248.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Frankia alni ACN14a]
Length = 873
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
RL L ++V Q EA VA V + + G RR GS +F+GP VGK ++A
Sbjct: 567 RLDDILHQRVVGQDEAVGLVADAVIRARSGIRDPRRPVGS-----FIFLGPTGVGKTELA 621
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
LSE + A MI + E V G ++ EAV+R P+SV+L
Sbjct: 622 RTLSEALFDAEEAMIRIDMSEYQERHTVSRLIGSPPGYVGYEEGGQLTEAVRRKPYSVVL 681
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD----WLPDSL 784
++I++A V + + ++ GRL D+ GR ++ N + I+T++ WL D++
Sbjct: 682 FDEIEKAHPDVFNTLLQVLDDGRLTDARGRTVNFTNTVIIMTSNIGSQWLMDAV 735
>gi|226364401|ref|YP_002782183.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
opacus B4]
gi|226242890|dbj|BAH53238.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Rhodococcus opacus B4]
Length = 806
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +++ E + ++L +RL L +V Q +A A+A V + + G N R
Sbjct: 486 PASQMTEEEKERL---------RRLEDELHRRVVGQDDAVRAIARAVRRSRTGMNDPDRP 536
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+ + G M+ L E V
Sbjct: 537 VGS-----FLFLGPTGVGKTELAKALAATLFGDENKMLRLDMSEFGERHTVSRLVGAPPG 591
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+SVILL++I++A V + + ++ GRL D GR + N
Sbjct: 592 YVGYGEAGQLTEQVRRNPYSVILLDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNT 651
Query: 772 IFILTADWLPD-------SLKFLSQGITLDEKKLTSLASGEWQLRLSIR 813
+ I+T++ D +L F + EK L G +LR S+R
Sbjct: 652 VLIMTSNLGSDIISSKSGALGFATGDAEAAEKPLRDRVMG--RLRESMR 698
>gi|182440247|ref|YP_001827966.1| chaperone [Streptomyces griseus subsp. griseus NBRC 13350]
gi|178468763|dbj|BAG23283.1| putative chaperone [Streptomyces griseus subsp. griseus NBRC 13350]
Length = 846
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 623 KRLLK---SLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGK 678
+RLLK + ++ Q EA +AV+ V + + G G R GS LF+GP VGK
Sbjct: 525 ERLLKLEEEMHARIVGQDEAVTAVSEAVRRNRAGMGDPNRPVGS-----FLFLGPTGVGK 579
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNP 729
++A L+EL+ GA M+ + +E R G D+ G E V+RNP
Sbjct: 580 TELAKTLAELLFGADDRMVRF-DMSEFQEKHTVARLVGAPPGYVGYDEAGQLTEKVRRNP 638
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+SV+L +++++A V + + ++ GRL D GR + + + I+T++
Sbjct: 639 YSVVLFDEVEKAHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSN 687
>gi|331002049|ref|ZP_08325569.1| hypothetical protein HMPREF0491_00431 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411845|gb|EGG91250.1| hypothetical protein HMPREF0491_00431 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 829
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L K L E+V Q+EA +AVA + + ++G +R GS LF+GP V
Sbjct: 500 DSQRLNNLEKVLHERVVGQEEAVNAVARAIRRGRVGLKDPKRPIGS-----FLFLGPTGV 554
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRN 728
GK +++ AL+ + G+ +I + E+ V G D+ G E V+RN
Sbjct: 555 GKTELSKALAYSMFGSENALIRVDMSEYMEKHSVSKMVGSPPGYVGYDEGGQLSEKVRRN 614
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+SVIL ++I++A V + + ++ G + DS GR + N + ILT++
Sbjct: 615 PYSVILFDEIEKAHPDVFNILLQVLDDGHITDSSGRTVDFKNTVIILTSN 664
>gi|212697140|ref|ZP_03305268.1| hypothetical protein ANHYDRO_01706 [Anaerococcus hydrogenalis DSM
7454]
gi|212675915|gb|EEB35522.1| hypothetical protein ANHYDRO_01706 [Anaerococcus hydrogenalis DSM
7454]
Length = 859
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 27/198 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL ES+ ++ D L E+V Q EA V+ + + + G +
Sbjct: 544 PVNKLVESERSKILGLAD---------KLHERVIGQDEAVDKVSDAIIRARSGLKDINKP 594
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALD 719
GS +F+GP VGK ++A +L+E + + MI + E+ V A
Sbjct: 595 IGS-----FIFLGPTGVGKTELAKSLAEAMFDSEKNMIRIDMSEYMEKYSVSRLIGAAPG 649
Query: 720 KIG--------EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
+G EAV+RNP+SVIL ++I++A V + + ++ GRL DS GR ++ N
Sbjct: 650 YVGYEEGGQLTEAVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNT 709
Query: 772 IFILTAD----WLPDSLK 785
I I+T++ +L D LK
Sbjct: 710 IIIMTSNIGSSYLIDGLK 727
>gi|170780568|ref|YP_001708900.1| Clp family ATP-binding protease [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155136|emb|CAQ00236.1| putative Clp-family ATP-binding protease [Clavibacter michiganensis
subsp. sepedonicus]
Length = 836
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 14/162 (8%)
Query: 627 KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASAL 685
K+L ++V Q+EA SA++ T+ + + G RR +GS +F GP VGK ++A AL
Sbjct: 509 KALHQRVIGQEEAISALSKTIRRTRAGLKDPRRPSGS-----FIFAGPTGVGKTELAKAL 563
Query: 686 SELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVILLED 737
+E + +I L E+ V R+ G ++ G E V+R PFSV+L ++
Sbjct: 564 AEFLFDDEDALISLDMSEYGEKHTVSRLFGAPPGFVGFEEGGQLTEKVRRKPFSVVLFDE 623
Query: 738 IDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
I++A + ++ + +E GRL D GR + N + I+T +
Sbjct: 624 IEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNL 665
>gi|15612666|ref|NP_240969.1| class III stress response-related ATPase [Bacillus halodurans
C-125]
gi|10172715|dbj|BAB03822.1| class III stress response-related ATPase [Bacillus halodurans
C-125]
Length = 813
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 36/280 (12%)
Query: 533 QLNRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSK---VLESAPEKTHIEPV 589
+L + L +T + V SQ E+A S +S R L + K + E T + V
Sbjct: 417 ELEQKLEETRKEKDAAVQSQEFEKAASLRDSEQRIREELDQMKNDWKQKQGQENTQV-VV 475
Query: 590 KDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTV 647
D ++S P +KL E + ++L K + + L ++V Q+EA A++ V
Sbjct: 476 DDIAQVVASWTGIPVSKLAEEETERLLK---------MEEILHKRVIGQEEAVKAISKAV 526
Query: 648 TQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
+ + G +R GS +F+GP VGK ++A A++E + G I + ++
Sbjct: 527 RRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARAVAETLFGDEDAFIRI-DMSEYM 580
Query: 707 EPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGR 757
E R G D+ G E V+R P+SVILL++I++A V + + +E GR
Sbjct: 581 EKHATSRLVGSPPGYVGHDEGGQLTEKVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGR 640
Query: 758 LVDSYGREISLGNVIFILTADWLPDSL---KFLSQGITLD 794
L DS GR + N I+T++ +L KFL G T D
Sbjct: 641 LTDSKGRTVDFRNTAVIMTSNVGASTLRKNKFL--GFTTD 678
>gi|386010294|ref|YP_005928571.1| chaperone ClpB [Pseudomonas putida BIRD-1]
gi|313497000|gb|ADR58366.1| ClpB [Pseudomonas putida BIRD-1]
Length = 831
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 32/233 (13%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +TD L R+KV E+ E V + G P K+ E + ++L
Sbjct: 487 ERSLQMVDQHGKTDNQLLRNKV----TEEEIAEVVSKWTGI-----PVAKMLEGEREKLL 537
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K + + L ++V Q EA +AVA V + + G + R +GS LF+GP
Sbjct: 538 K---------MEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGS-----FLFLGP 583
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAV 725
VGK ++ AL+E + M+ + E+ V R+ G ++ G EAV
Sbjct: 584 TGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAV 643
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SV+LL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 644 RRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 696
>gi|148272036|ref|YP_001221597.1| ATP-dependent protease, ATPase subunit [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829966|emb|CAN00893.1| ATP-dependent protease, ATPase subunit [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 836
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 14/162 (8%)
Query: 627 KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASAL 685
K+L ++V Q+EA SA++ T+ + + G RR +GS +F GP VGK ++A AL
Sbjct: 509 KALHQRVIGQEEAISALSKTIRRTRAGLKDPRRPSGS-----FIFAGPTGVGKTELAKAL 563
Query: 686 SELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVILLED 737
+E + +I L E+ V R+ G ++ G E V+R PFSV+L ++
Sbjct: 564 AEFLFDDEDALISLDMSEYGEKHTVSRLFGAPPGFVGFEEGGQLTEKVRRKPFSVVLFDE 623
Query: 738 IDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
I++A + ++ + +E GRL D GR + N + I+T +
Sbjct: 624 IEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNL 665
>gi|326780910|ref|ZP_08240175.1| ATPase AAA-2 domain protein [Streptomyces griseus XylebKG-1]
gi|326661243|gb|EGE46089.1| ATPase AAA-2 domain protein [Streptomyces griseus XylebKG-1]
Length = 846
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 623 KRLLK---SLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGK 678
+RLLK + ++ Q EA +AV+ V + + G G R GS LF+GP VGK
Sbjct: 525 ERLLKLEEEMHARIVGQDEAVTAVSEAVRRNRAGMGDPNRPVGS-----FLFLGPTGVGK 579
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNP 729
++A L+EL+ GA M+ + +E R G D+ G E V+RNP
Sbjct: 580 TELAKTLAELLFGADDRMVRF-DMSEFQEKHTVARLVGAPPGYVGYDEAGQLTEKVRRNP 638
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+SV+L +++++A V + + ++ GRL D GR + + + I+T++
Sbjct: 639 YSVVLFDEVEKAHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSN 687
>gi|295106465|emb|CBL04008.1| ATP-dependent chaperone ClpB [Gordonibacter pamelaeae 7-10-1-b]
Length = 886
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 20/205 (9%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L + L E+V Q EA S+VA + + + G + R GS LF+GP VGK ++A
Sbjct: 572 LEEKLHERVVGQDEAVSSVAGAIRRNRAGLSDPDRPIGS-----FLFLGPTGVGKTELAK 626
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILL 735
AL+E + + M+ + E+ V+ G D+ G EAV+R P+SV+LL
Sbjct: 627 ALAEYLFDSERAMVRIDMSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLL 686
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK-FLSQGITLD 794
++I++A V + + ++ GRL D GR +S N I I+T++ ++ F G D
Sbjct: 687 DEIEKAHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNVGSQFIREFAEHG---D 743
Query: 795 EKKLTSLASGEWQLRLSIRGKTTKR 819
EK + G LR + R + R
Sbjct: 744 EKAMKQAIDG--ALRATFRPEFINR 766
>gi|227524448|ref|ZP_03954497.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
hilgardii ATCC 8290]
gi|227088407|gb|EEI23719.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
hilgardii ATCC 8290]
Length = 869
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L +L ++V Q EA +AV+ V + + G R GS LF+GP VGK ++A
Sbjct: 564 LADNLHKRVIGQNEAVTAVSDAVIRSRAGLQDPSRPLGS-----FLFLGPTGVGKTELAK 618
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRNPFSVILL 735
AL+E + + M+ + E+ V A +G EAV+RNP++++L
Sbjct: 619 ALAEDLFDSENHMVRIDMSEYMEKESVSRLVGAAPGYVGYEEGGQLTEAVRRNPYTIVLF 678
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
++I++A V + + ++ GRL DS GR I N I I+T++ D L
Sbjct: 679 DEIEKAHPDVFNILLQVLDDGRLTDSQGRTIDFKNTILIMTSNLGSDIL 727
>gi|227513304|ref|ZP_03943353.1| S14 family endopeptidase Clp [Lactobacillus buchneri ATCC 11577]
gi|227083505|gb|EEI18817.1| S14 family endopeptidase Clp [Lactobacillus buchneri ATCC 11577]
Length = 869
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L +L ++V Q EA +AV+ V + + G R GS LF+GP VGK ++A
Sbjct: 564 LADNLHKRVIGQNEAVTAVSDAVIRSRAGLQDPSRPLGS-----FLFLGPTGVGKTELAK 618
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRNPFSVILL 735
AL+E + + M+ + E+ V A +G EAV+RNP++++L
Sbjct: 619 ALAEDLFDSENHMVRIDMSEYMEKESVSRLVGAAPGYVGYEEGGQLTEAVRRNPYTIVLF 678
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
++I++A V + + ++ GRL DS GR I N I I+T++ D L
Sbjct: 679 DEIEKAHPDVFNILLQVLDDGRLTDSQGRTIDFKNTILIMTSNLGSDIL 727
>gi|417986721|ref|ZP_12627286.1| ClpB family protein [Lactobacillus casei 32G]
gi|410524455|gb|EKP99363.1| ClpB family protein [Lactobacillus casei 32G]
Length = 873
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L +L ++V Q EA SAV+ V + + G R GS LF+GP V
Sbjct: 557 DRQKLLHLADNLHQRVIGQNEAVSAVSDAVLRSRAGLQDPSRPLGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 612 GKTELAKALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEQGGQLTEAVRRN 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++++LL++I++A+ V + + ++ GRL D GR + N I I+T++
Sbjct: 672 PYTIVLLDEIEKANPDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSN 721
>gi|357039780|ref|ZP_09101572.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355357586|gb|EHG05359.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 815
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++D+L R+ + L ++V Q EA +AV+ + + + G +R
Sbjct: 494 PVKKLAEEESDRLL---------RMEEILHQRVVGQDEAVAAVSRAIRRARAGLKDPKRP 544
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK--- 715
GS +F+GP VGK ++A AL+E + G M+ + E+ V R+ G
Sbjct: 545 IGS-----FIFLGPTGVGKTELARALAEAMFGDEDAMVRIDMSEYMEKFAVSRLVGAPPG 599
Query: 716 -TALDKIGE---AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G+ AV+R P+SV+LL++I++A V + + +E GRL D+ GR + N
Sbjct: 600 YVGYDEGGQLTDAVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDAKGRTVDFRNT 659
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 660 VIIMTSN 666
>gi|417980642|ref|ZP_12621322.1| ClpB family protein [Lactobacillus casei 12A]
gi|410524965|gb|EKP99872.1| ClpB family protein [Lactobacillus casei 12A]
Length = 868
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L +L ++V Q EA SAV+ V + + G R GS LF+GP V
Sbjct: 557 DRQKLLHLADNLHQRVIGQNEAVSAVSDAVLRSRAGLQDPSRPLGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 612 GKTELAKALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEQGGQLTEAVRRN 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++++LL++I++A+ V + + ++ GRL D GR + N I I+T++
Sbjct: 672 PYTIVLLDEIEKANPDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSN 721
>gi|291280297|ref|YP_003497132.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Deferribacter
desulfuricans SSM1]
gi|290754999|dbj|BAI81376.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Deferribacter
desulfuricans SSM1]
Length = 867
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 25/201 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E + D+L K + + L ++V Q +A AV+ + + + G N +R
Sbjct: 551 PVNKLLEEEADKLIK---------MEEYLHKRVIGQDKAIKAVSEAIRRSRAGLNDPKRP 601
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + + MI + E+ V
Sbjct: 602 IGS-----FIFLGPTGVGKTELAKALAEFLFDSEDAMIRIDMSEYMEKHAVAKLIGAPPG 656
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R P+SVILL++I++A V + + ++ GRL DS GR ++ N
Sbjct: 657 YVGYEEGGQLTERVRRRPYSVILLDEIEKAHPDVFNLLLQILDDGRLTDSKGRTVNFRNT 716
Query: 772 IFILTADWLPDSLK--FLSQG 790
+ I+T++ D ++ F +G
Sbjct: 717 VIIMTSNIGSDLIQQEFAKEG 737
>gi|159040200|ref|YP_001539453.1| ATPase [Salinispora arenicola CNS-205]
gi|157919035|gb|ABW00463.1| ATPase AAA-2 domain protein [Salinispora arenicola CNS-205]
Length = 844
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L ++V Q++A AV+ + + + G +R +GS +F GP VGK +++
Sbjct: 506 RMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGS-----FIFAGPSGVGKTELS 560
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVIL 734
AL+E + G+ +I L H+ V G D+ G E V+R PFSV+L
Sbjct: 561 KALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPFSVVL 620
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
++I++A V + + +E GRL D GR + N + ILT +
Sbjct: 621 FDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNL 665
>gi|427421597|ref|ZP_18911780.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425757474|gb|EKU98328.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 820
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 29/209 (13%)
Query: 581 PEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAA 640
PE T+ E + D + + P N+L ES++ + L +L E+V Q EA
Sbjct: 468 PEVTN-EDIADIVSAWTG-VPVNRLSESESAMILH---------LEDTLHERVIGQNEAV 516
Query: 641 SAVATTVTQCKLG--NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIP 698
AVA V + ++G N R A L+F GP VGK ++A AL+ V GA MI
Sbjct: 517 EAVAKAVRRSRVGMRNPNRPIAS------LIFSGPTGVGKTELAKALAASVFGAEDAMIR 570
Query: 699 LGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNI 749
+ + EP+ + G D+ G EAV+R P++VILL++I++A V +
Sbjct: 571 V-DMSEFMEPQSVSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVILLDEIEKAHPDVFNIL 629
Query: 750 KRAMERGRLVDSYGREISLGNVIFILTAD 778
+ ++ G L D+ GR++S N + I+T++
Sbjct: 630 LQLLDDGHLNDAKGRKVSFKNTLIIMTSN 658
>gi|291563625|emb|CBL42441.1| ATPases with chaperone activity, ATP-binding subunit
[butyrate-producing bacterium SS3/4]
Length = 829
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 29/204 (14%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +KL E + ++L K L L E+V Q EA AVA + + ++G +R
Sbjct: 493 PVSKLAEGETERLLK---------LESILHERVVGQDEAVVAVAKAIRRGRVGLKDPKRP 543
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++ AL+E + G +I + E+ V
Sbjct: 544 IGS-----FLFLGPTGVGKTELCKALAEAMFGTENALIRVDMSEYMEKHSVSKMIGSPPG 598
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+SVIL +++++A V + + ++ G + DS G +I N
Sbjct: 599 YVGYEGGGQLSEKVRRNPYSVILFDEVEKAHPDVFNILLQVLDDGHITDSQGHKIDFKNT 658
Query: 772 IFILTAD------WLPDSLKFLSQ 789
+ I+T++ P L F+SQ
Sbjct: 659 VIIMTSNAGAENIIAPRQLGFMSQ 682
>gi|301097499|ref|XP_002897844.1| heat shock protein 101 [Phytophthora infestans T30-4]
gi|262106592|gb|EEY64644.1| heat shock protein 101 [Phytophthora infestans T30-4]
Length = 895
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG---NGKRRGAGSKGDMWLLFMGPDRV 676
D L + L ++V Q EA AV V + + G +G+ G+ LF+GP V
Sbjct: 561 DRLMHLDERLHKRVVGQDEAVKAVCDAVLRSRAGLARSGQPTGS-------FLFLGPTGV 613
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+ + M+ + EE V G ++ EAV+RN
Sbjct: 614 GKTELAKALAYELFDDDKHMVRIDMSEYMEEHTVSRLIGAPPGFVGYQESGQLTEAVRRN 673
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKF 786
P++V+LL++I++A V + + ++ GRL DS+GR + N + I+T++ + L F
Sbjct: 674 PYNVVLLDEIEKAHPKVLNILLQVLDDGRLTDSHGRTVDFANTVIIMTSNIGAEHLLF 731
>gi|222100174|ref|YP_002534742.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga neapolitana
DSM 4359]
gi|221572564|gb|ACM23376.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga neapolitana
DSM 4359]
Length = 790
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 28/207 (13%)
Query: 586 IEPV--KDFLGCISSE---PPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAA 640
+EPV +D + I + P +++ ES+ D+L K L + + +++ Q+EA
Sbjct: 464 VEPVVNEDIVAKIVEQWTGIPVSRIMESEKDKLLK---------LEELIHQRLVNQEEAV 514
Query: 641 SAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPL 699
VA T+ + ++G RR G LF+GP VGK ++A L++++ G+ MI L
Sbjct: 515 RMVARTIRRARVGIKNPRRPIG-----VFLFLGPTGVGKTELARTLADVLFGSEDAMIRL 569
Query: 700 GPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKR 751
E+ V G ++ EAV+R P+SVILL++I++A V + +
Sbjct: 570 DMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNILLQ 629
Query: 752 AMERGRLVDSYGREISLGNVIFILTAD 778
E GRL D G + N I I+T++
Sbjct: 630 VFEDGRLTDGKGNTVDFRNTIIIMTSN 656
>gi|159037791|ref|YP_001537044.1| ATPase [Salinispora arenicola CNS-205]
gi|157916626|gb|ABV98053.1| ATPase AAA-2 domain protein [Salinispora arenicola CNS-205]
Length = 836
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L ++V Q++A AV+ + + + G +R +GS +F GP VGK +++
Sbjct: 506 RMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGS-----FIFAGPSGVGKTELS 560
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVIL 734
AL+E + G+ +I L H+ V G D+ G E V+R PFSV+L
Sbjct: 561 KALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPFSVVL 620
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
++I++A V + + +E GRL D GR + N + ILT +
Sbjct: 621 FDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNL 665
>gi|395650246|ref|ZP_10438096.1| chaperone [Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 854
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRR 658
P +K+ E + D+L K ++SL+ ++V Q+EA AV+ V + + G + R
Sbjct: 547 PVSKMLEGERDKLMK----------MESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNR 596
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK-- 715
+GS +F+GP VGK ++ AL+E + M+ + E+ V R+ G
Sbjct: 597 PSGS-----FMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPP 651
Query: 716 --TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
++ G EAV+R P+SVILL+++++A V + + +E GRL DS+GR + N
Sbjct: 652 GYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRN 711
Query: 771 VIFILTAD 778
+ ++T++
Sbjct: 712 TVIVMTSN 719
>gi|384134542|ref|YP_005517256.1| ATPase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339288627|gb|AEJ42737.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 679
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKM 681
K L L V Q EA VA + + ++G RRG G LF+GP VGK +M
Sbjct: 374 LKNLEADLASVVIGQDEAVRQVARAIRRSRVG--LRRGDRPIGS--FLFVGPTGVGKTEM 429
Query: 682 ASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVI 733
A L+EL+ G+ MI L E+ V G ++ E V+R+P+S+I
Sbjct: 430 ARRLAELLFGSKDAMIRLDMSEYMEKHSVSKLIGAPPGYVGYEQAGQLTEQVRRHPYSLI 489
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
L+++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 490 LVDEIEKAHPDVQHIFLQIMEDGRLTDSQGRTVSFKDTLIIMTSN 534
>gi|325847810|ref|ZP_08170032.1| ATP-dependent chaperone protein ClpB [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480828|gb|EGC83881.1| ATP-dependent chaperone protein ClpB [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 859
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 30/209 (14%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL ES+ ++ D L E+V Q EA V+ + + + G +
Sbjct: 544 PVNKLVESERSKILGLAD---------KLHERVIGQDEAVDKVSDAIIRARSGLKDINKP 594
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALD 719
GS +F+GP VGK ++A +L+E + + MI + E+ V A
Sbjct: 595 IGS-----FIFLGPTGVGKTELAKSLAEAMFDSEKNMIRIDMSEYMEKYSVSRLIGAAPG 649
Query: 720 KIG--------EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
+G EAV+RNP+SVIL ++I++A V + + ++ GRL DS GR ++ N
Sbjct: 650 YVGYEEGGQLTEAVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNT 709
Query: 772 IFILTAD----WLPDSLKFLSQGITLDEK 796
I I+T++ +L D LK + T+DE+
Sbjct: 710 IIIMTSNIGSSYLIDGLK---EDGTIDEE 735
>gi|300313318|ref|YP_003777410.1| ClpA/B-type chaperone ATPase [Herbaspirillum seropedicae SmR1]
gi|300076103|gb|ADJ65502.1| ClpA/B-type chaperone ATPase protein [Herbaspirillum seropedicae
SmR1]
Length = 889
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 24/180 (13%)
Query: 610 NDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTV--TQCKLGN-GKRRGAGSKGDM 666
D++Q LD D+ L E+V Q +A SAVA V ++ L + GK +G
Sbjct: 575 KDEIQTVLDLDAL------LQERVLGQPQATSAVAQRVRTSRANLDDPGKPKGV------ 622
Query: 667 WLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-VRGK-------TAL 718
LF+GP VGK + A AL++++ G +I + E V ++G
Sbjct: 623 -FLFVGPSGVGKTETALALADVLYGGERKLITINMSEYQEAHTVSGLKGSPPGYVGYGEG 681
Query: 719 DKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ EAV+RNP+SV+LL+++++A V + ++G + D+ GREI N I ILT++
Sbjct: 682 GVLTEAVRRNPYSVVLLDEVEKAHADVLELFFQVFDKGVMDDAEGREIDFKNTIIILTSN 741
>gi|218186618|gb|EEC69045.1| hypothetical protein OsI_37876 [Oryza sativa Indica Group]
Length = 1412
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG--NGKRRGAGSKGDMWLLFMGPDR 675
+ D ++ ++L ++V Q EA A++ ++ + ++G N R A +F GP
Sbjct: 1083 ESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKNPNRPIAS------FIFAGPTG 1136
Query: 676 VGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKR 727
VGK ++A AL+ G+ MI L E V G T ++ EAV+R
Sbjct: 1137 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 1196
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++V+L ++I++A V + + +E GRL DS GR + N + I+T++
Sbjct: 1197 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 1247
>gi|154483501|ref|ZP_02025949.1| hypothetical protein EUBVEN_01205 [Eubacterium ventriosum ATCC
27560]
gi|149735753|gb|EDM51639.1| ATPase family associated with various cellular activities (AAA)
[Eubacterium ventriosum ATCC 27560]
Length = 831
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 17/168 (10%)
Query: 623 KRLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
+RLLK L ++V Q EA +AVA V + ++G R GS LF+GP VGK
Sbjct: 519 QRLLKLESILHKRVVGQTEAVTAVAKAVRRGRVGLKSANRPIGS-----FLFLGPTGVGK 573
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPF 730
+++ L+E V G+ MI + E+ V G ++ + V+RNP+
Sbjct: 574 TELSKTLAEAVFGSEDAMIRVDMSEYMEKHSVSKLIGSPPGYVGYEEGGQLSDKVRRNPY 633
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
SV+L ++I++A V + + ++ G++ DS GR++S N I I+T++
Sbjct: 634 SVVLFDEIEKAHPDVFNILLQVLDDGQITDSKGRKVSFKNTIIIMTSN 681
>gi|430833117|ref|ZP_19451130.1| chaperone ClpB [Enterococcus faecium E0679]
gi|430838077|ref|ZP_19456027.1| chaperone ClpB [Enterococcus faecium E0688]
gi|430858164|ref|ZP_19475793.1| chaperone ClpB [Enterococcus faecium E1552]
gi|430486572|gb|ELA63408.1| chaperone ClpB [Enterococcus faecium E0679]
gi|430492357|gb|ELA68771.1| chaperone ClpB [Enterococcus faecium E0688]
gi|430546116|gb|ELA86082.1| chaperone ClpB [Enterococcus faecium E1552]
Length = 869
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|227510297|ref|ZP_03940346.1| S14 family endopeptidase Clp [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227189949|gb|EEI70016.1| S14 family endopeptidase Clp [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 869
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L +L ++V Q EA +AV+ V + + G R GS LF+GP VGK ++A
Sbjct: 564 LADNLHKRVIGQNEAVTAVSDAVIRSRAGLQDPSRPLGS-----FLFLGPTGVGKTELAK 618
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRNPFSVILL 735
AL+E + + M+ + E+ V A +G EAV+RNP++++L
Sbjct: 619 ALAEDLFDSENHMVRIDMSEYMEKESVSRLVGAAPGYVGYEEGGQLTEAVRRNPYTIVLF 678
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
++I++A V + + ++ GRL DS GR I N I I+T++ D L
Sbjct: 679 DEIEKAHPDVFNILLQVLDDGRLTDSQGRTIDFKNTILIMTSNLGSDIL 727
>gi|254423501|ref|ZP_05037219.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
gi|196190990|gb|EDX85954.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
Length = 941
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ +L + L L E+V Q EA +AV+ + + + G R
Sbjct: 563 PVNRLLESERQKLLQ---------LESHLHERVIGQSEAVTAVSAAIRRARAGMKDPGRP 613
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LFMGP VGK ++A AL+ + +I L E+ V
Sbjct: 614 IGS-----FLFMGPTGVGKTELARALASFLFDTEEALIRLDMSEYMEKNSVSRLVGAPPG 668
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R+P+SV+LL+++++A V + + ++ GR+ DS GR + N
Sbjct: 669 YVGYEEGGQLSEAVRRHPYSVVLLDEVEKAHTDVFNILLQVLDDGRITDSQGRTVDFRNT 728
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 729 VIVMTSN 735
>gi|431412436|ref|ZP_19511871.1| chaperone ClpB [Enterococcus faecium E1630]
gi|431743147|ref|ZP_19532028.1| chaperone ClpB [Enterococcus faecium E2071]
gi|431759324|ref|ZP_19547938.1| chaperone ClpB [Enterococcus faecium E3346]
gi|430589391|gb|ELB27519.1| chaperone ClpB [Enterococcus faecium E1630]
gi|430607511|gb|ELB44831.1| chaperone ClpB [Enterococcus faecium E2071]
gi|430626124|gb|ELB62710.1| chaperone ClpB [Enterococcus faecium E3346]
Length = 869
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|293556232|ref|ZP_06674822.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1039]
gi|294615628|ref|ZP_06695483.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1636]
gi|425057913|ref|ZP_18461310.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 504]
gi|430825471|ref|ZP_19443675.1| chaperone ClpB [Enterococcus faecium E0164]
gi|430827600|ref|ZP_19445733.1| chaperone ClpB [Enterococcus faecium E0269]
gi|430835825|ref|ZP_19453811.1| chaperone ClpB [Enterococcus faecium E0680]
gi|430849709|ref|ZP_19467482.1| chaperone ClpB [Enterococcus faecium E1185]
gi|430871222|ref|ZP_19483645.1| chaperone ClpB [Enterococcus faecium E1575]
gi|431145494|ref|ZP_19499020.1| chaperone ClpB [Enterococcus faecium E1620]
gi|431497724|ref|ZP_19514878.1| chaperone ClpB [Enterococcus faecium E1634]
gi|431746158|ref|ZP_19534992.1| chaperone ClpB [Enterococcus faecium E2134]
gi|431764088|ref|ZP_19552631.1| chaperone ClpB [Enterococcus faecium E4215]
gi|291591457|gb|EFF23111.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1636]
gi|291601651|gb|EFF31913.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1039]
gi|403039488|gb|EJY50632.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 504]
gi|430445936|gb|ELA55635.1| chaperone ClpB [Enterococcus faecium E0164]
gi|430484460|gb|ELA61475.1| chaperone ClpB [Enterococcus faecium E0269]
gi|430488939|gb|ELA65579.1| chaperone ClpB [Enterococcus faecium E0680]
gi|430537460|gb|ELA77803.1| chaperone ClpB [Enterococcus faecium E1185]
gi|430558179|gb|ELA97606.1| chaperone ClpB [Enterococcus faecium E1575]
gi|430575941|gb|ELB14634.1| chaperone ClpB [Enterococcus faecium E1620]
gi|430588659|gb|ELB26851.1| chaperone ClpB [Enterococcus faecium E1634]
gi|430608927|gb|ELB46133.1| chaperone ClpB [Enterococcus faecium E2134]
gi|430631273|gb|ELB67595.1| chaperone ClpB [Enterococcus faecium E4215]
Length = 869
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|430819984|ref|ZP_19438628.1| chaperone ClpB [Enterococcus faecium E0045]
gi|430440187|gb|ELA50464.1| chaperone ClpB [Enterococcus faecium E0045]
Length = 869
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|145596784|ref|YP_001161081.1| ATPase [Salinispora tropica CNB-440]
gi|145306121|gb|ABP56703.1| ATPase AAA-2 domain protein [Salinispora tropica CNB-440]
Length = 844
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L ++V Q++A AV+ + + + G +R +GS +F GP VGK +++
Sbjct: 506 RMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGS-----FIFAGPSGVGKTELS 560
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVIL 734
AL+E + G+ +I L H+ V G D+ G E V+R PFSV+L
Sbjct: 561 KALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPFSVVL 620
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
++I++A V + + +E GRL D GR + N + ILT +
Sbjct: 621 FDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNL 665
>gi|441153256|ref|ZP_20966245.1| ATPase AAA [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440618490|gb|ELQ81560.1| ATPase AAA [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 830
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 22/169 (13%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMA 682
RL ++L +V Q EA +AVA V + + G G R GS LF+GP VGK ++A
Sbjct: 521 RLEETLHARVVGQDEAVTAVAQAVRRGRAGMGDPDRPTGS-----FLFLGPTGVGKTELA 575
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIG---EAVKRNPF 730
A++E++ G +I R D E + R G D+ G EAV+R P+
Sbjct: 576 KAIAEILFGQEDRLI----RFDMSEFQERHTVSRLVGSPPGYVGYDEAGQLTEAVRRKPY 631
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
SV+L +++++A V + + ++ GRL D+ GR + + + I+T++
Sbjct: 632 SVLLFDEVEKAHPDVFNLLLQVLDDGRLTDAQGRTVDFRHTVVIMTSNL 680
>gi|417990071|ref|ZP_12630563.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
A2-362]
gi|410536272|gb|EKQ10871.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
A2-362]
Length = 741
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA+ + + ++G N R GS LF+GP VGK +
Sbjct: 432 LKNLAGDLEKHVIGQNEAVDKVASAIRRNRIGFNKSGRPIGS-----FLFVGPTGVGKTE 486
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 487 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 546
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 547 ILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 592
>gi|238061431|ref|ZP_04606140.1| ATPase [Micromonospora sp. ATCC 39149]
gi|237883242|gb|EEP72070.1| ATPase [Micromonospora sp. ATCC 39149]
Length = 818
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L ++V Q++A AV+ + + + G +R +GS +F GP VGK +++
Sbjct: 485 RMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGS-----FIFAGPSGVGKTELS 539
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVIL 734
AL+E + G+ +I L H+ V R+ G D+ G E V+R PFSV+L
Sbjct: 540 KALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPFSVVL 599
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
++I++A V + + +E GRL D GR + N + ILT +
Sbjct: 600 FDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNL 644
>gi|443294551|ref|ZP_21033645.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Micromonospora lupini str.
Lupac 08]
gi|385882023|emb|CCH21911.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Micromonospora lupini str.
Lupac 08]
Length = 847
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L ++V Q++A AV+ + + + G +R +GS +F GP VGK +++
Sbjct: 506 RMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGS-----FIFAGPSGVGKTELS 560
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVIL 734
AL+E + G+ +I L H+ V G D+ G E V+R PFSV+L
Sbjct: 561 KALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPFSVVL 620
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
++I++A V + + +E GRL D GR + N + ILT +
Sbjct: 621 FDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNL 665
>gi|384917654|ref|ZP_10017769.1| ATPase [Citreicella sp. 357]
gi|384468463|gb|EIE52893.1| ATPase [Citreicella sp. 357]
Length = 952
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
+L L E+V Q EA ++VA V + G + GS LF+GP VGK ++A
Sbjct: 599 KLEDRLHERVIGQDEAIASVADAVRLARAGLRE----GSAPTATFLFLGPTGVGKTELAK 654
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVIL 734
AL+E V G MI + ++ E R G D+ G E V+R P+SV+L
Sbjct: 655 ALAETVYGDEDAMIRI-DMSEYGERHAVARLVGAPPGYVGYDEGGQLTERVRRRPYSVVL 713
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
L++I++A V + + + GRL D GR + N I I T++ D ++
Sbjct: 714 LDEIEKAHADVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQ 764
>gi|297560333|ref|YP_003679307.1| ATPase AAA [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296844781|gb|ADH66801.1| ATPase AAA-2 domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 830
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 22/173 (12%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGK 678
D L + L E+V Q EA +AV+ + + + G G R GS LF+GP VGK
Sbjct: 519 DRLVNLEEVLHERVIGQDEAVTAVSEAIRRSRAGLGDPDRPVGS-----FLFLGPTGVGK 573
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR------------VRGKTALDKIGEAVK 726
++A AL+E + G+ M+ R D E + R G ++ EAV+
Sbjct: 574 TELARALAEALFGSEDSMV----RIDMSEFQERHTASRLTGAPPGFVGYEEAGQLTEAVR 629
Query: 727 RNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
R+P+SV+LL+++++A V + + ++ GRL D GR + N + I+T++
Sbjct: 630 RHPYSVLLLDEVEKAHPDVFNLLLQLLDDGRLTDGQGRTVDFRNTVVIMTSNL 682
>gi|410696761|gb|AFV75829.1| ATPase with chaperone activity, ATP-binding subunit [Thermus
oshimai JL-2]
Length = 738
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 16/171 (9%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR-RGAGSKGDMWLLFMGPDRV 676
D + L + L ++V Q+EA A+A + + ++G G R R A S LF+G V
Sbjct: 435 DLEKLAHLEEELRKRVVGQEEAIRALANALRRAQVGLGGRTRVAAS-----FLFVGQSGV 489
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIGEAVKR 727
GK ++A AL+E++ G+ +I + +EP + G ++ EAV+R
Sbjct: 490 GKTQLAKALAEVLFGSERALIRF-DMSEFQEPHSISKLIGAPPGYVGYEQGGRLTEAVRR 548
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
PFSV+LL++I++A + + ++ GRL D GR + VI I+T++
Sbjct: 549 QPFSVVLLDEIEKAHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTSN 599
>gi|415888115|ref|ZP_11549051.1| ATP-dependent chaperone ClpB [Enterococcus faecium E4453]
gi|416134154|ref|ZP_11598210.1| ATP-dependent chaperone ClpB [Enterococcus faecium E4452]
gi|431294054|ref|ZP_19506928.1| chaperone ClpB [Enterococcus faecium E1626]
gi|364092666|gb|EHM35014.1| ATP-dependent chaperone ClpB [Enterococcus faecium E4452]
gi|364094972|gb|EHM37078.1| ATP-dependent chaperone ClpB [Enterococcus faecium E4453]
gi|430581647|gb|ELB20086.1| chaperone ClpB [Enterococcus faecium E1626]
Length = 869
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|427732303|ref|YP_007078540.1| ATP-dependent chaperone ClpB [Nostoc sp. PCC 7524]
gi|427368222|gb|AFY50943.1| ATP-dependent chaperone ClpB [Nostoc sp. PCC 7524]
Length = 880
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ +L + L L ++V QQEA AV+ + + + G R
Sbjct: 556 PVNRLLESERQKLLQ---------LESHLHQRVIGQQEAVEAVSAAIRRARAGMKDPNRP 606
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LFMGP VGK ++A AL++ + + ++ L E+ V
Sbjct: 607 IGS-----FLFMGPTGVGKTELARALAQFLFDSDDALVRLDMSEYMEKHSVSRLVGAPPG 661
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EA++R+P+SV+LL+++++A V + + ++ GR+ DS GR + N
Sbjct: 662 YIGYEEGGQLSEAIRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFRNT 721
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 722 VIVMTSN 728
>gi|386852989|ref|YP_006271002.1| Chaperone protein clpB [Actinoplanes sp. SE50/110]
gi|359840493|gb|AEV88934.1| Chaperone protein clpB [Actinoplanes sp. SE50/110]
Length = 840
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L ++V Q++A AV+ + + + G +R +GS +F GP VGK +++
Sbjct: 506 RMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGS-----FIFAGPSGVGKTELS 560
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVIL 734
AL+E + G+ +I L H+ V G D+ G E V+R PFSV+L
Sbjct: 561 KALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVVL 620
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
++I++A V + + +E GRL D GR + N + ILT +
Sbjct: 621 FDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNL 665
>gi|354807551|ref|ZP_09041015.1| ATP-dependent chaperone ClpB [Lactobacillus curvatus CRL 705]
gi|354513941|gb|EHE85924.1| ATP-dependent chaperone ClpB [Lactobacillus curvatus CRL 705]
Length = 861
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D RL L E+V Q +A +AV V + + G R GS LF+GP V
Sbjct: 556 DRQKLLRLADVLHERVIGQDQAVNAVTDAVLRSRAGLQNPDRPLGS-----FLFLGPTGV 610
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 611 GKTELAKALAEDLFDSERHMVRIDMSEYMEKYSVSRLVGAAPGYVGYEEGGQLTEAVRRN 670
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++++LL++I++A V + + ++ GRL DS GR + N I I+T++
Sbjct: 671 PYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVDFKNTIIIMTSN 720
>gi|213965131|ref|ZP_03393329.1| ATPase family associated with various cellular activities (AAA)
protein [Corynebacterium amycolatum SK46]
gi|213952245|gb|EEB63629.1| ATPase family associated with various cellular activities (AAA)
protein [Corynebacterium amycolatum SK46]
Length = 910
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L +++ Q+EA SAV+ + + + G +R +GS +F GP VGK +++
Sbjct: 517 RMEDELHKRIIGQEEAVSAVSRAIRRTRAGLKDPKRPSGS-----FIFAGPSGVGKTELS 571
Query: 683 SALSELVSGASPIMIPLGPRRDHEE---------PEVRVRGKTALDKIGEAVKRNPFSVI 733
AL+E + G +I + H+ P V G ++ E V+R PFSV+
Sbjct: 572 KALAEFLFGEEDALIQIDMGEFHDRFTASRLFGAPPGYV-GYEEGGQLTEKVRRKPFSVV 630
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
L ++I++A + + + +E GRL DS GR + N + I T++
Sbjct: 631 LFDEIEKAHKEIYNTLLQVLEDGRLTDSQGRVVDFKNTVLIFTSN 675
>gi|357132932|ref|XP_003568082.1| PREDICTED: chaperone protein ClpB1-like [Brachypodium distachyon]
Length = 912
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 94/193 (48%), Gaps = 23/193 (11%)
Query: 27 ASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALERLPTA 86
AS H Q TPLH+AA+L SG LRQA + + P + E S AL++LP+
Sbjct: 21 ASEAGHAQITPLHLAASLAGDKSGILRQAI--AQASGGDPAAGDSFERVLSGALKKLPSQ 78
Query: 87 QQNVSPGLDP-PISNALMAALKRAQ-AHQRRGCPEQQQQPLLAVKVELEQLIISILDDPS 144
SP D P S AL+ A++RAQ A ++RG LAV +QL++ +L+D
Sbjct: 79 ----SPPPDSVPASTALIKAIRRAQSAQKKRGDSH------LAV----DQLLLGLLEDSQ 124
Query: 145 VSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIGLGFRPSSRNLYMNPRLQQAGG--- 201
+S ++EA S+ V+A +E+ S+ F+ + Y ++QAG
Sbjct: 125 ISDCLKEAGVSASRVRAELEKLRGGDSRKVESASGDTNFQ--ALKTYGRDLVEQAGKLDP 182
Query: 202 VCGGQSEPEMVVR 214
V G E VVR
Sbjct: 183 VIGRDEEIRRVVR 195
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 14/176 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + + L +V Q EA +AVA V + + G G+ ++ GS LF+GP V
Sbjct: 557 DKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQPTGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+E + +++ + E+ V G ++ E V+R
Sbjct: 612 GKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTEQVRRR 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
P+SVIL +++++A + V + + ++ GRL D GR + N + I+T++ + L
Sbjct: 672 PYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL 727
>gi|354615766|ref|ZP_09033497.1| ATPase AAA-2 domain protein [Saccharomonospora paurometabolica YIM
90007]
gi|353219879|gb|EHB84386.1| ATPase AAA-2 domain protein [Saccharomonospora paurometabolica YIM
90007]
Length = 847
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 14/163 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L + L +V Q EA AV+ +V + + G + R +GS LF+GP VGK ++A
Sbjct: 533 LEEHLHGRVVGQDEAVRAVSESVRRTRAGLAEPNRPSGS-----FLFLGPTGVGKTELAR 587
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
AL+E + G MI L E V G ++ E V+R P+SVILL
Sbjct: 588 ALAEALFGTDDHMIRLDMSEYGERHTVSRLVGAPPGYVGYEEAGQLTEVVRRRPYSVILL 647
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + +E GRL D GR ++ N + I+T++
Sbjct: 648 DEIEKAHADVFNLLLQVLEDGRLTDGRGRTVNFTNTVLIMTSN 690
>gi|167762587|ref|ZP_02434714.1| hypothetical protein BACSTE_00943 [Bacteroides stercoris ATCC
43183]
gi|167699693|gb|EDS16272.1| ATP-dependent chaperone protein ClpB [Bacteroides stercoris ATCC
43183]
Length = 864
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 39/215 (18%)
Query: 599 EPPQNKLHESQNDQ--LQKPLDPDSF------------KRLLKS-----------LMEKV 633
E Q KLHE Q DQ +++ +D + ++L+S L ++V
Sbjct: 509 EETQQKLHEMQGDQAMIKEEVDAEDIADVVSRWTGIPVSKMLQSEKEKLLHLEDELHQRV 568
Query: 634 WWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGA 692
Q EA AVA V + + G +R GS LF+G VGK ++A AL+E +
Sbjct: 569 IGQNEAIEAVADAVRRSRAGLQDPKRPIGS-----FLFLGTTGVGKTELAKALAEFLFDD 623
Query: 693 SPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVILLEDIDEADMV 744
+M + E+ V R+ G D+ G EAV+R P+SV+L ++I++A
Sbjct: 624 ETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPD 683
Query: 745 VRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
V + + ++ GRL D+ GR ++ N I I+T++
Sbjct: 684 VFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNM 718
>gi|169830395|ref|YP_001716377.1| ATPase [Candidatus Desulforudis audaxviator MP104C]
gi|169637239|gb|ACA58745.1| ATPase AAA-2 domain protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 812
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L R+ L E+V Q EA AV+ + + + G RR
Sbjct: 491 PVKKLAEEETEKLL---------RMEDLLHERVVGQDEAVRAVSRAIRRARAGLKDPRRP 541
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A AL E + G ++ + +++E R
Sbjct: 542 IGS-----FIFLGPTGVGKTELARALGEALFGDEDALVRI-DMSEYQERHTVSRLVGAPP 595
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P++V+LL++I++A V + + +E GRL D+ GR + N
Sbjct: 596 GYVGYDEGGQLTEAVRRRPYTVVLLDEIEKAHPEVFNILLQVLEDGRLTDARGRTVDFRN 655
Query: 771 VIFILTAD 778
+ ILT++
Sbjct: 656 TVIILTSN 663
>gi|409992813|ref|ZP_11275982.1| ATPase [Arthrospira platensis str. Paraca]
gi|291568483|dbj|BAI90755.1| ClpB protein [Arthrospira platensis NIES-39]
gi|409936313|gb|EKN77808.1| ATPase [Arthrospira platensis str. Paraca]
Length = 928
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ +L + L L +V QQ+A AV+ + + + G R
Sbjct: 589 PVNRLLESERQKLLQ---------LESHLHRRVIGQQQAVEAVSAAIRRARAGMKDPGRP 639
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LFMGP VGK ++A AL+E + + MI + E+ V G
Sbjct: 640 IGS-----FLFMGPTGVGKTELARALAEFLFDSEEAMIRIDMSEYMEKHAVSRLVGAPPG 694
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R+P+SVIL +++++A V + + ++ GR+ DS GR + N
Sbjct: 695 YVGYDEGGQLSEAVRRHPYSVILFDEVEKAHPDVFNILLQVLDDGRITDSQGRLVDFRNT 754
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 755 VIVMTSN 761
>gi|297206321|ref|ZP_06923716.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
jensenii JV-V16]
gi|297149447|gb|EFH29745.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
jensenii JV-V16]
Length = 727
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 59/278 (21%)
Query: 527 PFQPKVQLNRNLGDTLQLNSNMVSSQPAERA-----------------VSPLNSPVRTDL 569
PF K ++ + QL + + ++ E+A V P SPV TD
Sbjct: 343 PFVDKEKIKERIDAAQQLKQDALKNEDYEKAAYYRDQIEKYDKMKDQKVDPDKSPVITDK 402
Query: 570 VLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSL 629
++ +K++E EKT I PV D + + + +QLQ L L
Sbjct: 403 IM--NKIVE---EKTGI-PVGD-------------IQKQEENQLQN---------LASDL 434
Query: 630 MEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSEL 688
KV Q +A VA + + ++G N R GS LF+GP VGK ++A ++
Sbjct: 435 KAKVIGQDKAVEQVARAIRRNRIGFNKSGRPIGS-----FLFVGPTGVGKTELAKQVALK 489
Query: 689 VSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDE 740
+ G++ MI E+ V G ++ E V+ NP+S+ILL++I++
Sbjct: 490 MFGSTDAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTERVRHNPYSLILLDEIEK 549
Query: 741 ADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
A V + ++ GRL DS GR +S + I I+T++
Sbjct: 550 AHPDVLNLFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 587
>gi|431756787|ref|ZP_19545419.1| chaperone ClpB [Enterococcus faecium E3083]
gi|431762013|ref|ZP_19550575.1| chaperone ClpB [Enterococcus faecium E3548]
gi|430620641|gb|ELB57443.1| chaperone ClpB [Enterococcus faecium E3083]
gi|430624705|gb|ELB61355.1| chaperone ClpB [Enterococcus faecium E3548]
Length = 869
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|383782938|ref|YP_005467505.1| putative ATPase associated with various cellular activities
[Actinoplanes missouriensis 431]
gi|381376171|dbj|BAL92989.1| putative ATPase associated with various cellular activities
[Actinoplanes missouriensis 431]
Length = 840
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 15/187 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L ++V Q++A AV+ + + + G +R +GS +F GP VGK +++
Sbjct: 506 RMEDELHKRVIGQEDAVQAVSKAIRRTRAGLKDPKRPSGS-----FIFAGPSGVGKTELS 560
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVIL 734
AL+E + G+ +I L H+ V R+ G D+ G E V+R PFSV+L
Sbjct: 561 KALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVVL 620
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW-LPDSLKFLSQGITL 793
++I++A V + + +E GRL D GR + N + ILT + D K +S G
Sbjct: 621 FDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRDVAKAVSLGFQA 680
Query: 794 DEKKLTS 800
E + +S
Sbjct: 681 SEAEESS 687
>gi|284989236|ref|YP_003407790.1| ATPase AAA-2 domain-containing protein [Geodermatophilus obscurus
DSM 43160]
gi|284062481|gb|ADB73419.1| ATPase AAA-2 domain protein [Geodermatophilus obscurus DSM 43160]
Length = 841
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L +++ Q+EA +V+ + + + G RR GS +F GP VGK ++A
Sbjct: 505 RMEDELHKRIIGQEEAIKSVSQAIRRTRAGLKDPRRPGGS-----FIFAGPSGVGKTELA 559
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVIL 734
AL++ + G +I + H+ V R+ G D+ G E V+R PFSV+L
Sbjct: 560 KALAQFLFGEDDALIQIDMGEFHDRFTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVVL 619
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
++I++A V + + +E GRL D GR + N I ILT +
Sbjct: 620 FDEIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNL 664
>gi|430822510|ref|ZP_19441088.1| chaperone ClpB [Enterococcus faecium E0120]
gi|430865070|ref|ZP_19480828.1| chaperone ClpB [Enterococcus faecium E1574]
gi|430443087|gb|ELA53084.1| chaperone ClpB [Enterococcus faecium E0120]
gi|430553148|gb|ELA92849.1| chaperone ClpB [Enterococcus faecium E1574]
Length = 869
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|408355978|ref|YP_006844509.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Amphibacillus
xylanus NBRC 15112]
gi|407726749|dbj|BAM46747.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Amphibacillus
xylanus NBRC 15112]
Length = 706
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L EKV Q A + VA + + + G R GS LF+GP VGK ++A L+E
Sbjct: 416 LSEKVIGQNHAVNKVAKAIRRSRAGLKVATRPIGS-----FLFVGPTGVGKTELAKVLAE 470
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ G +I L E V G ++ E V+RNP+S+ILL++I+
Sbjct: 471 ELFGTRDSLIRLDMSEYMERHSVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSLILLDEIE 530
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLT 799
+A V+ + ME G L DS+GR +S + + I+T++ S K + G D+ +
Sbjct: 531 KAHPDVQHMFLQIMEDGHLTDSHGRTVSFKDCVIIMTSNA-GSSFKEIQVGFNKDQNEAV 589
Query: 800 S 800
S
Sbjct: 590 S 590
>gi|310821880|ref|YP_003954238.1| ClpA/B family protein [Stigmatella aurantiaca DW4/3-1]
gi|309394952|gb|ADO72411.1| ClpA/B family protein [Stigmatella aurantiaca DW4/3-1]
Length = 841
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 13/190 (6%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
D + L L ++V +EA + +A + + G RR GS LF+GP VG
Sbjct: 526 DSERLLSLEADLGQRVIGHEEAVARIARVIRRNYAGFASRRPMGS-----FLFLGPTGVG 580
Query: 678 KKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGKTAL-------DKIGEAVKRNP 729
K +MA AL+E++ G ++ L E V R+ G A ++ E ++R P
Sbjct: 581 KTEMARALAEVLFGNRDALVRLDMSEMAESHGVSRLIGSPAGYVGYGDGGQLTEPIRRKP 640
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQ 789
SV++L++I++A V+ + + +E GRL D GR I N + ++T + ++ +S+
Sbjct: 641 SSVVVLDEIEKAHREVQMLLLQVLEEGRLTDGKGRHIDFSNTVIVMTTNLGSEAFSRVSK 700
Query: 790 GITLDEKKLT 799
+ LT
Sbjct: 701 TLGFGSAALT 710
>gi|328542274|ref|YP_004302383.1| ATPase AAA [Polymorphum gilvum SL003B-26A1]
gi|326412023|gb|ADZ69086.1| ATPase AAA-2 domain protein [Polymorphum gilvum SL003B-26A1]
Length = 968
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
+ D +L + L E+V Q+EA AVA V + G + RG + LF+GP VG
Sbjct: 606 EKDKLLKLEEKLHERVIGQEEAIRAVADAVRLARAGLREGRGPTA----TFLFLGPTGVG 661
Query: 678 KKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNP 729
K ++A L+E++ G +I + E V R+ G D+ G E V+R P
Sbjct: 662 KTELAKTLAEVIFGDQDAIIRIDMSEYGERHSVARLVGAPPGYVGYDEGGQLTEKVRRRP 721
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+SV+LL++I++A V + + + GRL D GR + N I I T++ D ++
Sbjct: 722 YSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQ 777
>gi|257887256|ref|ZP_05666909.1| AAA ATPase [Enterococcus faecium 1,141,733]
gi|257823310|gb|EEV50242.1| AAA ATPase [Enterococcus faecium 1,141,733]
Length = 869
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|229588328|ref|YP_002870447.1| chaperone [Pseudomonas fluorescens SBW25]
gi|229360194|emb|CAY47051.1| chaperone [Pseudomonas fluorescens SBW25]
Length = 854
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 119/235 (50%), Gaps = 36/235 (15%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +++ L RSKV E+ E V + G P +K+ E + D+L
Sbjct: 510 ERSLQMVDQHGKSENQLLRSKV----TEEEIAEVVSKWTGI-----PVSKMLEGERDKLL 560
Query: 615 KPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
K ++SL+ ++V Q+EA AV+ V + + G + R +GS +F+G
Sbjct: 561 K----------MESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGS-----FMFLG 605
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---E 723
P VGK ++ AL+E + M+ + E+ V R G ++ G E
Sbjct: 606 PTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAPPGYVGYEEGGYLTE 664
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
AV+R P+SVILL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 665 AVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
>gi|358063547|ref|ZP_09150156.1| hypothetical protein HMPREF9473_02218 [Clostridium hathewayi
WAL-18680]
gi|356698173|gb|EHI59724.1| hypothetical protein HMPREF9473_02218 [Clostridium hathewayi
WAL-18680]
Length = 819
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E+V Q+EA SAVA + + ++G +R GS LF+GP VGK ++ AL+E
Sbjct: 512 LHERVIGQEEAVSAVARAIRRGRVGLKDPKRPIGS-----FLFLGPTGVGKTELCKALAE 566
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ G +I + E+ V G ++ E V+RNP+SVIL ++I+
Sbjct: 567 AMFGTENALIRVDMSEYMEKHSVSKMIGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIE 626
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V + + ++ G + D+ GR+I N I I+T++
Sbjct: 627 KAHPDVFNILLQVLDDGHITDAQGRKIDFKNTILIMTSN 665
>gi|330470478|ref|YP_004408221.1| ATPase aaa-2 domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328813449|gb|AEB47621.1| atpase aaa-2 domain protein [Verrucosispora maris AB-18-032]
Length = 846
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L ++V Q++A AV+ + + + G +R +GS +F GP VGK +++
Sbjct: 506 RMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGS-----FIFAGPSGVGKTELS 560
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVIL 734
AL+E + G+ +I L H+ V R+ G D+ G E V+R PFSV+L
Sbjct: 561 KALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPFSVVL 620
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
++I++A V + + +E GRL D GR + N + ILT +
Sbjct: 621 FDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNL 665
>gi|293568999|ref|ZP_06680312.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1071]
gi|291588432|gb|EFF20267.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1071]
Length = 869
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|256851508|ref|ZP_05556897.1| ATP-dependent chaperone ClpB [Lactobacillus jensenii 27-2-CHN]
gi|260660931|ref|ZP_05861846.1| ATP-dependent chaperone ClpB [Lactobacillus jensenii 115-3-CHN]
gi|256616570|gb|EEU21758.1| ATP-dependent chaperone ClpB [Lactobacillus jensenii 27-2-CHN]
gi|260548653|gb|EEX24628.1| ATP-dependent chaperone ClpB [Lactobacillus jensenii 115-3-CHN]
Length = 727
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 59/278 (21%)
Query: 527 PFQPKVQLNRNLGDTLQLNSNMVSSQPAERA-----------------VSPLNSPVRTDL 569
PF K ++ + QL + + ++ E+A V P SPV TD
Sbjct: 343 PFVDKEKIKERIDAAQQLKQDALKNEDYEKAAYYRDQIEKYDKMKDQKVDPDKSPVITDK 402
Query: 570 VLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSL 629
++ +K++E EKT I PV D + + + +QLQ L L
Sbjct: 403 IM--NKIVE---EKTGI-PVGD-------------IQKQEENQLQN---------LASDL 434
Query: 630 MEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSEL 688
KV Q +A VA + + ++G N R GS LF+GP VGK ++A ++
Sbjct: 435 KAKVIGQDKAVEQVARAIRRNRIGFNKSGRPIGS-----FLFVGPTGVGKTELAKQVALK 489
Query: 689 VSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDE 740
+ G++ MI E+ V G ++ E V+ NP+S+ILL++I++
Sbjct: 490 MFGSTDAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTERVRHNPYSLILLDEIEK 549
Query: 741 ADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
A V + ++ GRL DS GR +S + I I+T++
Sbjct: 550 AHPDVLNLFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 587
>gi|299822456|ref|ZP_07054342.1| ATP-dependent Clp protease [Listeria grayi DSM 20601]
gi|299815985|gb|EFI83223.1| ATP-dependent Clp protease [Listeria grayi DSM 20601]
Length = 721
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L EKV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 416 MKHLEAHLNEKVIGQKQAVGKVAKAIRRSRVGLKQKNRPIGS-----FLFVGPTGVGKTE 470
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSV 732
+ L++ + G MI L E+ V G D+ G E ++R+P+S+
Sbjct: 471 LGRTLAKELFGTEEAMIRLDMSEYMEKHSVAKLIGSPPGYVGHDEAGQLTEKIRRHPYSI 530
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 531 LLLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 576
>gi|227551605|ref|ZP_03981654.1| S14 family endopeptidase Clp [Enterococcus faecium TX1330]
gi|257884473|ref|ZP_05664126.1| AAA ATPase [Enterococcus faecium 1,231,501]
gi|257895792|ref|ZP_05675445.1| AAA ATPase [Enterococcus faecium Com12]
gi|257898362|ref|ZP_05678015.1| AAA ATPase [Enterococcus faecium Com15]
gi|293377592|ref|ZP_06623781.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium PC4.1]
gi|293571788|ref|ZP_06682804.1| ATP-dependent chaperone ClpB [Enterococcus faecium E980]
gi|430841365|ref|ZP_19459284.1| chaperone ClpB [Enterococcus faecium E1007]
gi|431071617|ref|ZP_19494588.1| chaperone ClpB [Enterococcus faecium E1604]
gi|431106063|ref|ZP_19497220.1| chaperone ClpB [Enterococcus faecium E1613]
gi|431737614|ref|ZP_19526567.1| chaperone ClpB [Enterococcus faecium E1972]
gi|431740044|ref|ZP_19528963.1| chaperone ClpB [Enterococcus faecium E2039]
gi|227179282|gb|EEI60254.1| S14 family endopeptidase Clp [Enterococcus faecium TX1330]
gi|257820311|gb|EEV47459.1| AAA ATPase [Enterococcus faecium 1,231,501]
gi|257832357|gb|EEV58778.1| AAA ATPase [Enterococcus faecium Com12]
gi|257836274|gb|EEV61348.1| AAA ATPase [Enterococcus faecium Com15]
gi|291608042|gb|EFF37348.1| ATP-dependent chaperone ClpB [Enterococcus faecium E980]
gi|292643592|gb|EFF61713.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium PC4.1]
gi|430494141|gb|ELA70391.1| chaperone ClpB [Enterococcus faecium E1007]
gi|430567250|gb|ELB06336.1| chaperone ClpB [Enterococcus faecium E1604]
gi|430569595|gb|ELB08585.1| chaperone ClpB [Enterococcus faecium E1613]
gi|430598701|gb|ELB36436.1| chaperone ClpB [Enterococcus faecium E1972]
gi|430604171|gb|ELB41671.1| chaperone ClpB [Enterococcus faecium E2039]
Length = 869
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|431585951|ref|ZP_19520466.1| chaperone ClpB [Enterococcus faecium E1861]
gi|430593129|gb|ELB31115.1| chaperone ClpB [Enterococcus faecium E1861]
Length = 869
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|15606509|ref|NP_213889.1| ATP-dependent Clp protease [Aquifex aeolicus VF5]
gi|2983728|gb|AAC07290.1| ATP-dependent Clp protease [Aquifex aeolicus VF5]
Length = 810
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P ++HES D + + + L ++V Q EA AVA + + ++G GK R
Sbjct: 480 PVKRVHES---------DAEKLLHIEEELKKRVVGQDEAIKAVAKAIRRSRVGLKGKHRP 530
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
G +F+GP VGK + A AL+E + G +I E+ V
Sbjct: 531 IGV-----FMFLGPTGVGKTETAKALAEYLFGTEDALIRFDMSEYMEKHTVSRLIGAPPG 585
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P+SV+L ++I++A V + + GRL D GR + N
Sbjct: 586 YVGYEEGGQLTEAVRRRPYSVLLFDEIEKAHPDVFNIFLQIFDDGRLTDGLGRTVDFSNT 645
Query: 772 IFILTAD 778
I I+T++
Sbjct: 646 IIIMTSN 652
>gi|407981108|ref|ZP_11161862.1| endopeptidase ClpE [Bacillus sp. HYC-10]
gi|407412045|gb|EKF33901.1| endopeptidase ClpE [Bacillus sp. HYC-10]
Length = 700
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +V Q+ A VA V + + G K R GS LF+GP VGK +++ L+E
Sbjct: 407 LKARVIGQEHAVEKVAKAVKRSRAGLKSKHRPTGS-----FLFVGPTGVGKTELSKTLAE 461
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ G+ +I L E+ V G ++ E V+R P+S+ILL++I+
Sbjct: 462 ELFGSKDAIIRLDMSEYMEKHSVSKIIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIE 521
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 522 KAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 560
>gi|424766004|ref|ZP_18193366.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium
TX1337RF]
gi|402413011|gb|EJV45362.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium
TX1337RF]
Length = 869
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|302870292|ref|YP_003838929.1| ATPase AAA-2 domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|315503432|ref|YP_004082319.1| ATPase AAA-2 domain-containing protein [Micromonospora sp. L5]
gi|302573151|gb|ADL49353.1| ATPase AAA-2 domain protein [Micromonospora aurantiaca ATCC 27029]
gi|315410051|gb|ADU08168.1| ATPase AAA-2 domain protein [Micromonospora sp. L5]
Length = 845
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L ++V Q++A AV+ + + + G +R +GS +F GP VGK +++
Sbjct: 506 RMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGS-----FIFAGPSGVGKTELS 560
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVIL 734
AL+E + G+ +I L H+ V R+ G D+ G E V+R PFSV+L
Sbjct: 561 KALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPFSVVL 620
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
++I++A V + + +E GRL D GR + N + ILT +
Sbjct: 621 FDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNL 665
>gi|260664204|ref|ZP_05865057.1| ATP-dependent chaperone ClpB [Lactobacillus jensenii SJ-7A-US]
gi|260562090|gb|EEX28059.1| ATP-dependent chaperone ClpB [Lactobacillus jensenii SJ-7A-US]
Length = 727
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 59/278 (21%)
Query: 527 PFQPKVQLNRNLGDTLQLNSNMVSSQPAERA-----------------VSPLNSPVRTDL 569
PF K ++ + QL + + ++ E+A V P SPV TD
Sbjct: 343 PFVDKEKIKERIDAAQQLKQDALKNEDYEKAAYYRDQIEKYDKMKDQKVDPDKSPVITDK 402
Query: 570 VLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSL 629
++ +K++E EKT I PV D + + + +QLQ L L
Sbjct: 403 IM--NKIVE---EKTGI-PVGD-------------IQKQEENQLQN---------LASDL 434
Query: 630 MEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSEL 688
KV Q +A VA + + ++G N R GS LF+GP VGK ++A ++
Sbjct: 435 KAKVIGQDKAVEQVARAIRRNRIGFNKSGRPIGS-----FLFVGPTGVGKTELAKQVALK 489
Query: 689 VSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDE 740
+ G++ MI E+ V G ++ E V+ NP+S+ILL++I++
Sbjct: 490 MFGSTDAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTERVRHNPYSLILLDEIEK 549
Query: 741 ADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
A V + ++ GRL DS GR +S + I I+T++
Sbjct: 550 AHPDVLNLFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 587
>gi|421770581|ref|ZP_16207274.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactobacillus
rhamnosus LRHMDP2]
gi|421773502|ref|ZP_16210146.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactobacillus
rhamnosus LRHMDP3]
gi|411181838|gb|EKS48999.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactobacillus
rhamnosus LRHMDP2]
gi|411181968|gb|EKS49126.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactobacillus
rhamnosus LRHMDP3]
Length = 742
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 432 LKNLASDLEQHVIGQNEAVDKVARAIRRNRIGFNKTGRPIGS-----FLFVGPTGVGKTE 486
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 487 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 546
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 547 ILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 592
>gi|258508818|ref|YP_003171569.1| ATP-dependent clp protease ATP-binding subunit [Lactobacillus
rhamnosus GG]
gi|257148745|emb|CAR87718.1| ATP-dependent clp protease ATP-binding subunit [Lactobacillus
rhamnosus GG]
Length = 740
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 430 LKNLASDLEQHVIGQNEAVDKVARAIRRNRIGFNKTGRPIGS-----FLFVGPTGVGKTE 484
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 485 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 544
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 545 ILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 590
>gi|404484723|ref|ZP_11019927.1| chaperone ClpB [Barnesiella intestinihominis YIT 11860]
gi|404339728|gb|EJZ66159.1| chaperone ClpB [Barnesiella intestinihominis YIT 11860]
Length = 862
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 25/189 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NK+ +S+ D+L L + L ++V Q EA +A+A V + + G N RR
Sbjct: 545 PVNKMMQSEKDKLL---------HLEEELHKRVVGQNEAITAIADAVRRSRAGLNDPRRP 595
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+G VGK ++A AL+E + +M + +++E R
Sbjct: 596 IGS-----FIFLGTTGVGKTELAKALAEYLFDDENMMTRI-DMSEYQEKFSATRLIGSPP 649
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EA++R P+SV+L ++I++A + + + ++ GRL D+ GR ++ N
Sbjct: 650 GYVGYDEGGQLTEAIRRKPYSVVLFDEIEKAHPDIFNILLQVLDDGRLTDNKGRLVNFKN 709
Query: 771 VIFILTADW 779
I I+T++
Sbjct: 710 TIIIMTSNM 718
>gi|386774044|ref|ZP_10096422.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium paraconglomeratum LC44]
Length = 862
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 169/380 (44%), Gaps = 60/380 (15%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L ++V Q EA A++ + + + G +R GS +F GP VGK ++A AL+E
Sbjct: 510 LHKRVIGQDEAIKAISRAIRRTRAGLKDPKRPGGS-----FIFAGPTGVGKTELAKALAE 564
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDI 738
+ G +I L + E R G D+ G E V+R PFSV+L +++
Sbjct: 565 FLFGDEEALIQL-DMSEFGEKHTASRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEV 623
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW-LPDSLKFLSQGITLDEKK 797
++A + + ++ + +E GRL DS GR + N I I+T + D K +S G T
Sbjct: 624 EKAHVDIFNSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNLGTRDIAKGVSMGFT----- 678
Query: 798 LTSLASGEWQLRLSIRGKTTKRRASWLDEE-ERSTKPRKETGSGLSFDLNKAADVGDDKD 856
A G+ +R S + EE ++ KP F LN+ DV
Sbjct: 679 ----AGGDLS-------TDYERMKSKVHEELKQHFKP--------EF-LNRVDDVVVFPQ 718
Query: 857 GSHNSSDLTVDHEEEHGFTNRLL---MTPSTSTPSQDLL--NSVDSAIVFKPVDFGRIRR 911
S VD E + RL MT + P++DLL D + +P+ I+R
Sbjct: 719 LSRTEIIQIVDLEVAK-LSRRLQDRDMTLELTQPAKDLLAEKGYDPVLGARPLRR-TIQR 776
Query: 912 DVTNAITKK--FSSI-IGDALSIEILDEALEKLVGGVWLGRTG----LEDWTEKVLVPSL 964
D+ ++++++ F + +GD + ++D E L+G + R G LE ++ V V S+
Sbjct: 777 DIEDSLSERILFGQVQVGDQI---VVDAEGEGLLGDLTFARRGEDGSLEPISDVVDVESM 833
Query: 965 HQLKLRLPNNATAATDESAT 984
Q + +A A +T
Sbjct: 834 TQARAEDVTHADGADGADST 853
>gi|374983752|ref|YP_004959247.1| Clp protease ATP binding subunit [Streptomyces bingchenggensis
BCW-1]
gi|297154404|gb|ADI04116.1| Clp protease ATP binding subunit [Streptomyces bingchenggensis
BCW-1]
Length = 846
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 14/169 (8%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGK 678
D L + L ++V Q+EA SAVA +V + + G R GS LF+GP VGK
Sbjct: 529 DRLLSLEEHLHKRVIGQEEAVSAVADSVLRSRAGLADPGRPIGS-----FLFLGPTGVGK 583
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPF 730
++A AL+E + G+ M+ L E+ V G ++ EAV+R P+
Sbjct: 584 TELARALAEALFGSEDRMVRLDMSEYQEKHTVSRLIGAPPGYVGHEEAGQLTEAVRRQPY 643
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
S++LL+++++ V + + ++ GRL D+ GR I N + ++T++
Sbjct: 644 SLLLLDEVEKGHADVFNILLQVLDDGRLTDAQGRTIDFKNTVIVMTSNL 692
>gi|301097509|ref|XP_002897849.1| heat shock protein 101 [Phytophthora infestans T30-4]
gi|262106597|gb|EEY64649.1| heat shock protein 101 [Phytophthora infestans T30-4]
Length = 859
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG---NGKRRGAGSKGDMWLLFMGPDRV 676
D L + L ++V Q EA AV V + + G +G+ G+ LF+GP V
Sbjct: 525 DRLMHLDERLHKRVVGQDEAVKAVCDAVLRSRAGLARSGQPTGS-------FLFLGPTGV 577
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+ + M+ + EE V G ++ EAV+RN
Sbjct: 578 GKTELAKALAYELFDDDKHMVRIDMSEYMEEHTVSRLIGAPPGFVGYQESGQLTEAVRRN 637
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKF 786
P++V+LL++I++A V + + ++ GRL DS+GR + N + I+T++ + L F
Sbjct: 638 PYNVVLLDEIEKAHPKVLNILLQVLDDGRLTDSHGRTVDFANTVIIMTSNIGAEHLLF 695
>gi|261207870|ref|ZP_05922555.1| AAA ATPase [Enterococcus faecium TC 6]
gi|289566614|ref|ZP_06447034.1| ATP-dependent chaperone ClpB [Enterococcus faecium D344SRF]
gi|294619343|ref|ZP_06698807.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1679]
gi|294623272|ref|ZP_06702137.1| ATP-dependent chaperone ClpB [Enterococcus faecium U0317]
gi|406580943|ref|ZP_11056128.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD4E]
gi|406583142|ref|ZP_11058233.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD3E]
gi|406585530|ref|ZP_11060517.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD2E]
gi|410937182|ref|ZP_11369043.1| S14 family endopeptidase Clp [Enterococcus sp. GMD5E]
gi|424792413|ref|ZP_18218650.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium V689]
gi|424802674|ref|ZP_18228151.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium S447]
gi|424859590|ref|ZP_18283581.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R499]
gi|424950760|ref|ZP_18365909.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R496]
gi|424953535|ref|ZP_18368487.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R494]
gi|424955626|ref|ZP_18370452.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R446]
gi|424960430|ref|ZP_18374945.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1986]
gi|424966994|ref|ZP_18380735.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1140]
gi|424996928|ref|ZP_18408712.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV165]
gi|425000782|ref|ZP_18412330.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV161]
gi|425005284|ref|ZP_18416542.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV102]
gi|425012317|ref|ZP_18423141.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium E422]
gi|425016766|ref|ZP_18427311.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium C621]
gi|425032054|ref|ZP_18437142.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 515]
gi|425038469|ref|ZP_18443085.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 513]
gi|425041849|ref|ZP_18446229.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 511]
gi|425056077|ref|ZP_18459537.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 505]
gi|427396161|ref|ZP_18888920.1| chaperone ClpB [Enterococcus durans FB129-CNAB-4]
gi|430844057|ref|ZP_19461955.1| chaperone ClpB [Enterococcus faecium E1050]
gi|430851649|ref|ZP_19469384.1| chaperone ClpB [Enterococcus faecium E1258]
gi|430854796|ref|ZP_19472508.1| chaperone ClpB [Enterococcus faecium E1392]
gi|430860185|ref|ZP_19477789.1| chaperone ClpB [Enterococcus faecium E1573]
gi|430949860|ref|ZP_19486083.1| chaperone ClpB [Enterococcus faecium E1576]
gi|431006665|ref|ZP_19489130.1| chaperone ClpB [Enterococcus faecium E1578]
gi|431032955|ref|ZP_19490801.1| chaperone ClpB [Enterococcus faecium E1590]
gi|431229764|ref|ZP_19501967.1| chaperone ClpB [Enterococcus faecium E1622]
gi|431253130|ref|ZP_19504456.1| chaperone ClpB [Enterococcus faecium E1623]
gi|431661126|ref|ZP_19523938.1| chaperone ClpB [Enterococcus faecium E1904]
gi|431767174|ref|ZP_19555629.1| chaperone ClpB [Enterococcus faecium E1321]
gi|431772254|ref|ZP_19560596.1| chaperone ClpB [Enterococcus faecium E2369]
gi|431775806|ref|ZP_19564076.1| chaperone ClpB [Enterococcus faecium E2560]
gi|431785704|ref|ZP_19573727.1| chaperone ClpB [Enterococcus faecium E6045]
gi|447912591|ref|YP_007394003.1| ClpB protein [Enterococcus faecium NRRL B-2354]
gi|260078253|gb|EEW65959.1| AAA ATPase [Enterococcus faecium TC 6]
gi|289161604|gb|EFD09484.1| ATP-dependent chaperone ClpB [Enterococcus faecium D344SRF]
gi|291594392|gb|EFF25805.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1679]
gi|291597300|gb|EFF28486.1| ATP-dependent chaperone ClpB [Enterococcus faecium U0317]
gi|402917692|gb|EJX38446.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium V689]
gi|402919393|gb|EJX39999.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium S447]
gi|402926253|gb|EJX46304.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R499]
gi|402932558|gb|EJX52057.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R496]
gi|402938740|gb|EJX57721.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R494]
gi|402947708|gb|EJX65900.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1986]
gi|402948275|gb|EJX66428.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R446]
gi|402955261|gb|EJX72803.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1140]
gi|402986687|gb|EJY01799.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV102]
gi|402987462|gb|EJY02524.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV165]
gi|402988520|gb|EJY03523.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV161]
gi|402993774|gb|EJY08362.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium E422]
gi|403006206|gb|EJY19870.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium C621]
gi|403014034|gb|EJY27054.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 515]
gi|403019574|gb|EJY32170.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 513]
gi|403025348|gb|EJY37434.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 511]
gi|403032476|gb|EJY44030.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 505]
gi|404453319|gb|EKA00384.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD4E]
gi|404457117|gb|EKA03691.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD3E]
gi|404462545|gb|EKA08277.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD2E]
gi|410734293|gb|EKQ76213.1| S14 family endopeptidase Clp [Enterococcus sp. GMD5E]
gi|425722831|gb|EKU85722.1| chaperone ClpB [Enterococcus durans FB129-CNAB-4]
gi|430496647|gb|ELA72706.1| chaperone ClpB [Enterococcus faecium E1050]
gi|430542231|gb|ELA82339.1| chaperone ClpB [Enterococcus faecium E1258]
gi|430547675|gb|ELA87591.1| chaperone ClpB [Enterococcus faecium E1392]
gi|430552622|gb|ELA92350.1| chaperone ClpB [Enterococcus faecium E1573]
gi|430557714|gb|ELA97160.1| chaperone ClpB [Enterococcus faecium E1576]
gi|430561201|gb|ELB00478.1| chaperone ClpB [Enterococcus faecium E1578]
gi|430564056|gb|ELB03240.1| chaperone ClpB [Enterococcus faecium E1590]
gi|430573750|gb|ELB12528.1| chaperone ClpB [Enterococcus faecium E1622]
gi|430578218|gb|ELB16788.1| chaperone ClpB [Enterococcus faecium E1623]
gi|430600246|gb|ELB37900.1| chaperone ClpB [Enterococcus faecium E1904]
gi|430631182|gb|ELB67505.1| chaperone ClpB [Enterococcus faecium E1321]
gi|430638118|gb|ELB74095.1| chaperone ClpB [Enterococcus faecium E2369]
gi|430642454|gb|ELB78232.1| chaperone ClpB [Enterococcus faecium E2560]
gi|430646863|gb|ELB82324.1| chaperone ClpB [Enterococcus faecium E6045]
gi|445188300|gb|AGE29942.1| ClpB protein [Enterococcus faecium NRRL B-2354]
Length = 869
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|258649192|ref|ZP_05736661.1| negative regulator of genetic competence ClpC/MecB [Prevotella
tannerae ATCC 51259]
gi|260850456|gb|EEX70325.1| negative regulator of genetic competence ClpC/MecB [Prevotella
tannerae ATCC 51259]
Length = 866
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K + +L KV Q EA S + +T+ +LG G R G+ LF+GP VGK
Sbjct: 548 LKGMKAALQAKVISQDEAISHLVRAITRNRLGLKGTDRPIGT-----FLFVGPTGVGKTY 602
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFS 731
+ L+E + G+ +I + ++ E R G D+ G E V+R+P+S
Sbjct: 603 LVKCLAEWMFGSKEDLIRI-DMSEYGEKYSTSRLVGAPPGYVGYDEGGQLTEKVRRHPYS 661
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGI 791
VILL++I++A V + + M+ GRL D G + N I I+T++ LK +GI
Sbjct: 662 VILLDEIEKAHPDVFNTLLQVMDEGRLTDGNGTTVDFRNTIIIMTSNSGTRQLKDFGRGI 721
Query: 792 TLDE 795
E
Sbjct: 722 GFKE 725
>gi|258539996|ref|YP_003174495.1| ATP-dependent clp protease ATP-binding subunit [Lactobacillus
rhamnosus Lc 705]
gi|257151672|emb|CAR90644.1| ATP-dependent clp protease ATP-binding subunit [Lactobacillus
rhamnosus Lc 705]
Length = 742
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 432 LKNLASDLEQHVIGQNEAVDKVARAIRRNRIGFNKTGRPIGS-----FLFVGPTGVGKTE 486
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 487 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 546
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 547 ILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 592
>gi|226187326|dbj|BAH35430.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Rhodococcus erythropolis PR4]
Length = 807
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 608 SQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDM 666
SQ Q +K D +RL + L +V Q +A A+A V + + G + R GS
Sbjct: 491 SQMTQAEK----DRLRRLEEELHGRVIGQDDAVRAIARAVRRSRTGMSDPDRPVGS---- 542
Query: 667 WLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTAL 718
LF+GP VGK ++A AL+ + G M+ E V G
Sbjct: 543 -FLFLGPTGVGKTELAKALAATLFGDENKMLRFDMSEFGERHTVSRLVGAPPGYVGYGEA 601
Query: 719 DKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++ E V+RNP+SVILL++I++A V + + ++ GRL D GR + N + I+T++
Sbjct: 602 GQLTEQVRRNPYSVILLDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNTVVIMTSN 661
Query: 779 WLPDSLKFLSQGI 791
D + S G+
Sbjct: 662 LGSDIISSKSGGL 674
>gi|433458325|ref|ZP_20416259.1| ATPase [Arthrobacter crystallopoietes BAB-32]
gi|432193493|gb|ELK50214.1| ATPase [Arthrobacter crystallopoietes BAB-32]
Length = 867
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 22/175 (12%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR-RGAGSKGDMWLLFMGPDRV 676
D + RL L ++V Q A +A+A V + + G G R GS LF+GP V
Sbjct: 545 DRERLARLEDDLHQRVIGQDAAVTALAKAVRRNRTGMGDEGRPVGS-----FLFLGPTGV 599
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIG---EA 724
GK ++A AL+E + G M+ R D E R G D+ G E
Sbjct: 600 GKTELAKALAESLFGDENAMV----RFDMSEYGERHTVSRLVGAPPGYVGYDEAGQLTER 655
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
V+R+P+SV+LL++I++A V + + ++ GRL DS GR + N + I+T++
Sbjct: 656 VRRHPYSVVLLDEIEKAHPDVFNLLLQVLDDGRLTDSQGRTVDFRNTVVIMTSNL 710
>gi|22255857|gb|AAM94782.1| CalR4 [Micromonospora echinospora]
Length = 797
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L ++V Q++A AV+ + + + G +R +GS +F GP VGK +++
Sbjct: 468 RMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGS-----FIFAGPSGVGKTELS 522
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVIL 734
AL+E + G+ +I L H+ V R+ G D+ G E V+R PFSV+L
Sbjct: 523 KALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPFSVVL 582
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
++I++A V + + +E GRL D GR + N + ILT +
Sbjct: 583 FDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNL 627
>gi|94985317|ref|YP_604681.1| ATPase AAA [Deinococcus geothermalis DSM 11300]
gi|94555598|gb|ABF45512.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Deinococcus
geothermalis DSM 11300]
Length = 745
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
L + L E+V+ Q EA A+++ + + ++G G R ++ LF+GP VGK +A A
Sbjct: 442 LEEQLQEQVYGQPEAIKALSSALRRARVGLGGR----TRVSASFLFVGPSGVGKTHLAKA 497
Query: 685 LSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLE 736
L++ + G+ +I + E + G ++ G EAV+R PFSVILL+
Sbjct: 498 LAKTLFGSERSLIRVDMSEFQEAHSISKLIGSPPGYVGFEQGGRLTEAVRRQPFSVILLD 557
Query: 737 DIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+I++A V + ++ GRL D GR + I I+T++
Sbjct: 558 EIEKAHPDVYNTFLQVLDDGRLTDGLGRTVDFRRTIIIMTSN 599
>gi|410666747|ref|YP_006919118.1| chaperone protein ClpB [Thermacetogenium phaeum DSM 12270]
gi|409104494|gb|AFV10619.1| chaperone protein ClpB [Thermacetogenium phaeum DSM 12270]
Length = 820
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 25/200 (12%)
Query: 590 KDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTV 647
+D ISS P +KL E ++++L R+ + L ++V Q EA AVA +
Sbjct: 479 EDIAAIISSWTGIPVSKLQEEESERLL---------RMEEILHQRVIGQDEAVKAVARAM 529
Query: 648 TQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
+ + G +R GS +F+GP VGK ++A AL+E + G M+ E
Sbjct: 530 RRSRAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAEALFGDEEAMVRFDMSEYME 584
Query: 707 EPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
+ V G ++ EAV+R P+SV+L ++I++A + + + ME GRL
Sbjct: 585 KHTVSRLLGAPPGYVGYEEAGQLTEAVRRRPYSVVLFDEIEKAHPDIFHVLLQVMEDGRL 644
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR + N + I+T++
Sbjct: 645 TDAKGRTVDFRNTVIIMTSN 664
>gi|257882823|ref|ZP_05662476.1| AAA ATPase [Enterococcus faecium 1,231,502]
gi|257818481|gb|EEV45809.1| AAA ATPase [Enterococcus faecium 1,231,502]
Length = 869
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|157692042|ref|YP_001486504.1| endopeptidase ClpE [Bacillus pumilus SAFR-032]
gi|157680800|gb|ABV61944.1| S14 family endopeptidase ClpE [Bacillus pumilus SAFR-032]
Length = 700
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +V Q+ A VA V + + G K R GS LF+GP VGK +++ L+E
Sbjct: 407 LKARVIGQEHAVEKVAKAVKRSRAGLKSKHRPTGS-----FLFVGPTGVGKTELSKTLAE 461
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDID 739
+ G+ +I L E+ V G D+ G E V+R P+S+ILL++I+
Sbjct: 462 ELFGSREAIIRLDMSEYMEKHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIE 521
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 522 KAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 560
>gi|367467947|ref|ZP_09467857.1| ClpB protein [Patulibacter sp. I11]
gi|365817002|gb|EHN11990.1| ClpB protein [Patulibacter sp. I11]
Length = 871
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 30/234 (12%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHI-EPVKDFLGCISSEPPQNKLHESQNDQL 613
ER ++ L T + G ++ LE+ HI E V + G P +L E + ++L
Sbjct: 510 ERQIAELERQAET-VAAGENRFLENEVTAEHIAEVVGRWTGI-----PVARLLEGEVEKL 563
Query: 614 QKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMG 672
D L ++V Q++A SAV+ + + + G G R GS LF+G
Sbjct: 564 VHMED---------RLHDRVIGQEDAVSAVSAAIRRSRAGLGDPDRPIGS-----FLFLG 609
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EA 724
P VGK ++A AL+E + + M+ + E+ V R+ G D+ G EA
Sbjct: 610 PTGVGKTELARALAEFLFDSQDAMVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEA 669
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V+R P+SVILL+++++A V + + ++ GRL D +GR + N + +LT++
Sbjct: 670 VRRRPYSVILLDEVEKAHPDVFNILLQLLDDGRLTDGHGRTVDFTNSVLVLTSN 723
>gi|423079430|ref|ZP_17068102.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
rhamnosus ATCC 21052]
gi|357546749|gb|EHJ28657.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
rhamnosus ATCC 21052]
Length = 754
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 444 LKNLASDLEQHVIGQNEAVDKVARAIRRNRIGFNKTGRPIGS-----FLFVGPTGVGKTE 498
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 499 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 558
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 559 ILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 604
>gi|315651740|ref|ZP_07904745.1| ABC superfamily ATP binding cassette transporter ABC protein
[Lachnoanaerobaculum saburreum DSM 3986]
gi|315485995|gb|EFU76372.1| ABC superfamily ATP binding cassette transporter ABC protein
[Lachnoanaerobaculum saburreum DSM 3986]
Length = 831
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L K L E+V Q EA SAVA + + ++G +R GS LF+GP V
Sbjct: 500 DSQRLNNLEKVLHERVVGQDEAVSAVARAIRRGRVGLKDPKRPIGS-----FLFLGPTGV 554
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK +++ AL+ + G+ +I + E+ V G ++ E V+RN
Sbjct: 555 GKTELSKALAYSIFGSENALIRVDMSEYMEKHSVSRMVGSPPGYVGYEEGGQLSEKVRRN 614
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+SVIL ++I++A V + + ++ G + DS GR + N + ILT++
Sbjct: 615 PYSVILFDEIEKAHPDVFNILLQVLDDGHITDSSGRMVDFKNTVIILTSN 664
>gi|269218173|ref|ZP_06162027.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 848 str. F0332]
gi|269212301|gb|EEZ78641.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 848 str. F0332]
Length = 861
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ + L ++V Q EA A++ + + + G R GS +F GP VGK ++A
Sbjct: 506 RMEEELHKRVIGQNEAVVALSQAIRRTRAGLKDPNRPGGS-----FIFAGPTGVGKTELA 560
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVI 733
AL+E + G +I L ++ E R G D+ G E V+R PFSV+
Sbjct: 561 KALAEFLFGDESALITL-DMSEYSEKHAVSRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 619
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW-LPDSLKFLSQGIT 792
L +++++A + ++ + +E GRL DS GR + N I I+T + D K ++ G
Sbjct: 620 LFDEVEKAHPDLFNSLLQILEEGRLTDSQGRVVDFKNTIIIMTTNLGTKDIAKGVTTGFQ 679
Query: 793 LDEKKLTS 800
D TS
Sbjct: 680 FDGDTTTS 687
>gi|453071471|ref|ZP_21974622.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
qingshengii BKS 20-40]
gi|452759515|gb|EME17878.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
qingshengii BKS 20-40]
Length = 807
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 608 SQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDM 666
SQ Q +K D +RL + L +V Q +A A+A V + + G + R GS
Sbjct: 491 SQMTQAEK----DRLRRLEEELHGRVIGQDDAVRAIARAVRRSRTGMSDPDRPVGS---- 542
Query: 667 WLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTAL 718
LF+GP VGK ++A AL+ + G M+ E V G
Sbjct: 543 -FLFLGPTGVGKTELAKALAATLFGDENKMLRFDMSEFGERHTVSRLVGAPPGYVGYGEA 601
Query: 719 DKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++ E V+RNP+SVILL++I++A V + + ++ GRL D GR + N + I+T++
Sbjct: 602 GQLTEQVRRNPYSVILLDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNTVVIMTSN 661
Query: 779 WLPDSLKFLSQGI 791
D + S G+
Sbjct: 662 LGSDIISSKSGGL 674
>gi|395239495|ref|ZP_10417372.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
gigeriorum CRBIP 24.85]
gi|394476273|emb|CCI87349.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
gigeriorum CRBIP 24.85]
Length = 740
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 42/233 (18%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
++ V P SP+ TD ++ K++E EKT+I PV D + + + +QLQ
Sbjct: 388 DQKVDPDKSPIITDKIM--DKIVE---EKTNI-PVGD-------------IQKQEENQLQ 428
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
L L V Q +A VA + + ++G N R GS LF+GP
Sbjct: 429 N---------LATDLKANVIGQDKAVEKVARAIRRNRIGFNKSGRPIGS-----FLFVGP 474
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAV 725
VGK ++A L++ + G+ MI + E+ V G ++ E V
Sbjct: 475 TGVGKTELAKQLAKQMFGSENSMIRIDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTEQV 534
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ NP+S+ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 535 RHNPYSLILLDEIEKAHPDVMNLFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 587
>gi|69246678|ref|ZP_00604068.1| AAA ATPase, central region:Clp, N terminal [Enterococcus faecium
DO]
gi|257878405|ref|ZP_05658058.1| AAA ATPase [Enterococcus faecium 1,230,933]
gi|257889396|ref|ZP_05669049.1| AAA ATPase [Enterococcus faecium 1,231,410]
gi|257894409|ref|ZP_05674062.1| AAA ATPase [Enterococcus faecium 1,231,408]
gi|260559994|ref|ZP_05832172.1| AAA ATPase [Enterococcus faecium C68]
gi|293563855|ref|ZP_06678287.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1162]
gi|314939819|ref|ZP_07847037.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium
TX0133a04]
gi|314941451|ref|ZP_07848341.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0133C]
gi|314949622|ref|ZP_07852945.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0082]
gi|314950820|ref|ZP_07853891.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0133A]
gi|314992240|ref|ZP_07857679.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0133B]
gi|314995368|ref|ZP_07860473.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium
TX0133a01]
gi|383328854|ref|YP_005354738.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium Aus0004]
gi|389868731|ref|YP_006376154.1| S14 family endopeptidase Clp [Enterococcus faecium DO]
gi|424836338|ref|ZP_18260990.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R501]
gi|424883196|ref|ZP_18306826.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R497]
gi|424963149|ref|ZP_18377413.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1190]
gi|424972156|ref|ZP_18385531.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1139]
gi|424973174|ref|ZP_18386463.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1137]
gi|424977540|ref|ZP_18390545.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1123]
gi|424980135|ref|ZP_18392949.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV99]
gi|424984472|ref|ZP_18397004.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV69]
gi|424988733|ref|ZP_18401035.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV38]
gi|424991382|ref|ZP_18403539.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV26]
gi|424993651|ref|ZP_18405636.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV168]
gi|425006577|ref|ZP_18417749.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV1]
gi|425015056|ref|ZP_18425697.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium E417]
gi|425021303|ref|ZP_18431569.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium C497]
gi|425027926|ref|ZP_18435178.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium C1904]
gi|425034766|ref|ZP_18439633.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 514]
gi|425045971|ref|ZP_18450027.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 510]
gi|425050278|ref|ZP_18454040.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 509]
gi|425051765|ref|ZP_18455408.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 506]
gi|425061992|ref|ZP_18465182.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 503]
gi|430830696|ref|ZP_19448752.1| chaperone ClpB [Enterococcus faecium E0333]
gi|430846057|ref|ZP_19463922.1| chaperone ClpB [Enterococcus faecium E1133]
gi|431541883|ref|ZP_19518112.1| chaperone ClpB [Enterococcus faecium E1731]
gi|431750136|ref|ZP_19538863.1| chaperone ClpB [Enterococcus faecium E2297]
gi|431754799|ref|ZP_19543459.1| chaperone ClpB [Enterococcus faecium E2883]
gi|431770796|ref|ZP_19559193.1| chaperone ClpB [Enterococcus faecium E1644]
gi|431778765|ref|ZP_19566971.1| chaperone ClpB [Enterococcus faecium E4389]
gi|431781919|ref|ZP_19570059.1| chaperone ClpB [Enterococcus faecium E6012]
gi|68195152|gb|EAN09610.1| AAA ATPase, central region:Clp, N terminal [Enterococcus faecium
DO]
gi|257812633|gb|EEV41391.1| AAA ATPase [Enterococcus faecium 1,230,933]
gi|257825756|gb|EEV52382.1| AAA ATPase [Enterococcus faecium 1,231,410]
gi|257830788|gb|EEV57395.1| AAA ATPase [Enterococcus faecium 1,231,408]
gi|260073829|gb|EEW62153.1| AAA ATPase [Enterococcus faecium C68]
gi|291604184|gb|EFF33686.1| ATP-dependent chaperone ClpB [Enterococcus faecium E1162]
gi|313590414|gb|EFR69259.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium
TX0133a01]
gi|313593208|gb|EFR72053.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0133B]
gi|313596996|gb|EFR75841.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0133A]
gi|313599736|gb|EFR78579.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0133C]
gi|313640915|gb|EFS05495.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium
TX0133a04]
gi|313644015|gb|EFS08595.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium TX0082]
gi|378938548|gb|AFC63620.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium Aus0004]
gi|388533980|gb|AFK59172.1| S14 family endopeptidase Clp [Enterococcus faecium DO]
gi|402920977|gb|EJX41450.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R501]
gi|402934089|gb|EJX53480.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium R497]
gi|402950151|gb|EJX68163.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1190]
gi|402955878|gb|EJX73377.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1139]
gi|402959213|gb|EJX76487.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1137]
gi|402965540|gb|EJX82246.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium P1123]
gi|402967236|gb|EJX83808.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV99]
gi|402968757|gb|EJX85221.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV69]
gi|402971013|gb|EJX87318.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV38]
gi|402976856|gb|EJX92710.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV26]
gi|402982175|gb|EJX97656.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV168]
gi|402996833|gb|EJY11194.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium E417]
gi|402997109|gb|EJY11459.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium ERV1]
gi|403004998|gb|EJY18749.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium C1904]
gi|403007218|gb|EJY20809.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium C497]
gi|403019449|gb|EJY32052.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 514]
gi|403024224|gb|EJY36398.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 509]
gi|403025856|gb|EJY37900.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 510]
gi|403036856|gb|EJY48194.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 506]
gi|403039857|gb|EJY50975.1| ATP-dependent chaperone protein ClpB [Enterococcus faecium 503]
gi|430482285|gb|ELA59403.1| chaperone ClpB [Enterococcus faecium E0333]
gi|430539877|gb|ELA80116.1| chaperone ClpB [Enterococcus faecium E1133]
gi|430592930|gb|ELB30917.1| chaperone ClpB [Enterococcus faecium E1731]
gi|430610609|gb|ELB47753.1| chaperone ClpB [Enterococcus faecium E2297]
gi|430618627|gb|ELB55468.1| chaperone ClpB [Enterococcus faecium E2883]
gi|430634687|gb|ELB70801.1| chaperone ClpB [Enterococcus faecium E1644]
gi|430643426|gb|ELB79165.1| chaperone ClpB [Enterococcus faecium E4389]
gi|430648320|gb|ELB83727.1| chaperone ClpB [Enterococcus faecium E6012]
Length = 869
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 716 VLIMTSNI---GSQLLLEGVTAD 735
>gi|419720434|ref|ZP_14247667.1| negative regulator of genetic competence ClpC/MecB
[Lachnoanaerobaculum saburreum F0468]
gi|383303387|gb|EIC94839.1| negative regulator of genetic competence ClpC/MecB
[Lachnoanaerobaculum saburreum F0468]
Length = 831
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L K L E+V Q EA SAVA + + ++G +R GS LF+GP V
Sbjct: 500 DSQRLNNLEKVLHERVVGQDEAVSAVARAIRRGRVGLKDPKRPIGS-----FLFLGPTGV 554
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK +++ AL+ + G+ +I + E+ V G ++ E V+RN
Sbjct: 555 GKTELSKALAYSIFGSENALIRVDMSEYMEKHSVSRMVGSPPGYVGYEEGGQLSEKVRRN 614
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+SVIL ++I++A V + + ++ G + DS GR + N + ILT++
Sbjct: 615 PYSVILFDEIEKAHPDVFNILLQVLDDGHITDSSGRMVDFKNTVIILTSN 664
>gi|423097380|ref|ZP_17085176.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
Q2-87]
gi|397885254|gb|EJL01737.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
Q2-87]
Length = 854
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 119/235 (50%), Gaps = 36/235 (15%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +++ L RSKV E+ E V + G P +K+ E + D+L
Sbjct: 510 ERSLQMVDQHGKSENQLLRSKV----TEEEIAEVVSKWTGI-----PVSKMLEGERDKLL 560
Query: 615 KPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
K ++SL+ ++V Q+EA AV+ V + + G + R +GS +F+G
Sbjct: 561 K----------MESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGS-----FMFLG 605
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---E 723
P VGK ++ AL+E + M+ + E+ V R G ++ G E
Sbjct: 606 PTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAPPGYVGYEEGGYLTE 664
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
AV+R P+SVILL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 665 AVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
>gi|374705469|ref|ZP_09712339.1| ATP-dependent chaperone ClpB [Pseudomonas sp. S9]
Length = 854
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 32/234 (13%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +T+ L RSKV E+ E V + G P +K+ E + D+L
Sbjct: 510 ERSLQMVDQHGKTENQLLRSKV----TEEEIAEVVSKWTGI-----PVSKMLEGERDKLL 560
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K D L ++V Q E AVA V + + G + R +GS LF+GP
Sbjct: 561 KMEDL---------LHQRVIGQNEGVVAVANAVRRSRAGLSDPNRPSGS-----FLFLGP 606
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAV 725
VGK ++ AL+E + ++ + E+ V R+ G ++ G EAV
Sbjct: 607 TGVGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAV 666
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
+R P+SVILL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 667 RRKPYSVILLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVVVMTSNL 720
>gi|359150593|ref|ZP_09183427.1| chaperone [Streptomyces sp. S4]
Length = 864
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMA 682
+L +L +V Q EA +AV+ V + + G G R GS LF+GP VGK ++A
Sbjct: 533 KLEDALHSRVVGQDEAVTAVSQAVRRSRAGMGDPNRPTGS-----FLFLGPTGVGKTELA 587
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
AL+EL+ G M+ E+ V G ++ E V+R P+SV+L
Sbjct: 588 KALAELLFGDENRMVRFDMSEFQEKHTVSRLVGAPPGYVGHEEAGQLTEKVRRQPYSVLL 647
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + ++ GRL D+ GR + N + I+T++
Sbjct: 648 FDEIEKAHPDVFNALLQVLDDGRLTDAQGRTVDFRNTVVIMTSN 691
>gi|323490586|ref|ZP_08095791.1| Class III stress response-related ATPase, ClpC [Planococcus
donghaensis MPA1U2]
gi|323395678|gb|EGA88519.1| Class III stress response-related ATPase, ClpC [Planococcus
donghaensis MPA1U2]
Length = 820
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 31/199 (15%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +KL ++++D+L L+ +S L +V Q EA ++++ + + + G +R
Sbjct: 488 PVSKLAQTESDKL---LNLESI------LHNRVIGQNEAVTSISKAIRRARAGLKDPKRP 538
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + G MI R D E R
Sbjct: 539 IGS-----FIFLGPTGVGKTELARALAESMFGDEEAMI----RIDMSEYMERHSTSRLVG 589
Query: 712 ----VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREIS 767
G ++ E V+R P+SV+LL++I++A V + + +E GRL DS GR +
Sbjct: 590 SPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRRVD 649
Query: 768 LGNVIFILTADWLPDSLKF 786
N + I+T++ + LK+
Sbjct: 650 FRNTVIIMTSNVGAEELKY 668
>gi|302836842|ref|XP_002949981.1| ClpD chaperone, Hsp100 family [Volvox carteri f. nagariensis]
gi|300264890|gb|EFJ49084.1| ClpD chaperone, Hsp100 family [Volvox carteri f. nagariensis]
Length = 972
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 17/174 (9%)
Query: 617 LDPDSFKRLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
++ D +RLL L V Q++A ++AT + + + G RR S LLF+G
Sbjct: 570 MNDDEKERLLNMRSDLGHHVVGQEDAVESIATALCRARCGLKDPRRPVAS-----LLFVG 624
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEA 724
P VGK ++A LSE G+ ++ L E V G K+ EA
Sbjct: 625 PTGVGKTELAKVLSEQYYGSRDALLRLDMSEYMERHSVSKLVGAPPGYVGFGEGGKLTEA 684
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++R PFSV+L ++I++A V + + +E GRL DS GR +S + + ILT++
Sbjct: 685 IRRRPFSVVLFDEIEKAHPDVFAVLLQILEDGRLTDSQGRTVSFKHAMIILTSN 738
>gi|294816447|ref|ZP_06775090.1| chaperone [Streptomyces clavuligerus ATCC 27064]
gi|294329046|gb|EFG10689.1| chaperone [Streptomyces clavuligerus ATCC 27064]
Length = 860
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRG 659
P ++L E++ +L K L +L E+V Q EA AV+ V + + G G R
Sbjct: 505 PVSQLTETERHRLMK---------LEDALHERVIGQDEAVVAVSQAVRRGRAGMGDPDRP 555
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL++L+ G + MI E+ V
Sbjct: 556 TGS-----FLFLGPTGVGKTELAKALAQLLFGDADRMIRFDMSEFQEKHTVSRLVGSPPG 610
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P+SV+L +++++A V + + ++ GRL D+ GR + +
Sbjct: 611 YVGYEEAGQLTEAVRRKPYSVVLFDEVEKAHPDVFHLLLQVLDDGRLTDAQGRTVDFRHT 670
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 671 VVIMTSN 677
>gi|116619644|ref|YP_821800.1| ATPase [Candidatus Solibacter usitatus Ellin6076]
gi|116222806|gb|ABJ81515.1| ATPase AAA-2 domain protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 869
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L + L ++V Q EA +AVA V + + G +R GS +FMGP VGK ++A
Sbjct: 559 LEEELHKRVIGQDEAVTAVAEAVIRARSGLKDPQRPIGS-----FIFMGPTGVGKTELAR 613
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVIL 734
AL+E + MI + +++E R G D+ G EAV+R P+SVIL
Sbjct: 614 ALAEYMFDDEHAMIRI-DMSEYQEKHTVSRLVGAPPGYVGYDEGGQLTEAVRRRPYSVIL 672
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + ++ GRL D GR + N I I+T++
Sbjct: 673 FDEIEKAHHDVFNVLLQVLDDGRLTDGQGRTVDFKNTIVIMTSN 716
>gi|32474446|ref|NP_867440.1| negative regulator of genetic competence ClpC/MecB [Rhodopirellula
baltica SH 1]
gi|32444984|emb|CAD74986.1| negative regulator of genetic competence ClpC/MecB [Rhodopirellula
baltica SH 1]
Length = 859
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 17/174 (9%)
Query: 624 RLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKK 679
RLLK L ++V Q +A +AVA V + + G +R GS +F GP VGK
Sbjct: 517 RLLKMEEELHKRVVSQSQAVTAVAKAVRRSRSGLKDPKRPTGS-----FIFAGPTGVGKT 571
Query: 680 KMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFS 731
+A AL+E + G + ++ + E+ V G ++ E ++R P++
Sbjct: 572 LLAKALAEYMFGDADALVHIDMSEYMEKHNVSRLIGAPPGFVGYEEGGQLTEKIRRRPYA 631
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
V+L ++I++A V + + ME GRL DS+GR + N I I+T + +++K
Sbjct: 632 VVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTILIMTTNAGAEAIK 685
>gi|421742208|ref|ZP_16180349.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
gi|406689392|gb|EKC93272.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
Length = 864
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMA 682
+L +L +V Q EA +AV+ V + + G G R GS LF+GP VGK ++A
Sbjct: 533 KLEDALHSRVVGQDEAVTAVSQAVRRSRAGMGDPNRPTGS-----FLFLGPTGVGKTELA 587
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
AL+EL+ G M+ E+ V G ++ E V+R P+SV+L
Sbjct: 588 KALAELLFGDENRMVRFDMSEFQEKHTVSRLVGAPPGYVGHEEAGQLTEKVRRQPYSVLL 647
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + ++ GRL D+ GR + N + I+T++
Sbjct: 648 FDEIEKAHPDVFNALLQVLDDGRLTDAQGRTVDFRNTVVIMTSN 691
>gi|383788301|ref|YP_005472869.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Caldisericum
exile AZM16c01]
gi|381363937|dbj|BAL80766.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Caldisericum exile AZM16c01]
Length = 814
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 14/176 (7%)
Query: 627 KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASAL 685
+ L +++ Q+EA AV+ + + + G + G+ LF+GP VGK ++A L
Sbjct: 505 EELHKRIVGQEEAVRAVSRAIRRARSGLKNPNKPIGT-----FLFLGPTGVGKTELAKTL 559
Query: 686 SELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLED 737
+E + G +I L E+ V G ++ EAV+R P+SV+L ++
Sbjct: 560 AEFLFGNENALIRLDMSEYMEKFSVSRLIGSPPGYVGYEEGGQLTEAVRRRPYSVVLFDE 619
Query: 738 IDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITL 793
I++A V + + M+ GRL DS GR + N + ILT+++ ++LK S G L
Sbjct: 620 IEKAHPDVFDILLQIMDEGRLTDSQGRTVDFKNTVIILTSNFGTENLKEKSVGFEL 675
>gi|330811801|ref|YP_004356263.1| chaperone [Pseudomonas brassicacearum subsp. brassicacearum NFM421]
gi|378952908|ref|YP_005210396.1| chaperone ClpB [Pseudomonas fluorescens F113]
gi|423699369|ref|ZP_17673859.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
Q8r1-96]
gi|327379909|gb|AEA71259.1| Chaperone [Pseudomonas brassicacearum subsp. brassicacearum NFM421]
gi|359762922|gb|AEV65001.1| ClpB [Pseudomonas fluorescens F113]
gi|387997271|gb|EIK58601.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
Q8r1-96]
Length = 854
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 119/235 (50%), Gaps = 36/235 (15%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +++ L RSKV E+ E V + G P +K+ E + D+L
Sbjct: 510 ERSLQMVDQHGKSENQLLRSKV----TEEEIAEVVSKWTGI-----PVSKMLEGERDKLL 560
Query: 615 KPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
K ++SL+ ++V Q+EA AV+ V + + G + R +GS +F+G
Sbjct: 561 K----------MESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGS-----FMFLG 605
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---E 723
P VGK ++ AL+E + M+ + E+ V R G ++ G E
Sbjct: 606 PTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAPPGYVGYEEGGYLTE 664
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
AV+R P+SVILL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 665 AVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
>gi|336113612|ref|YP_004568379.1| ATPase AAA-2 domain-containing protein [Bacillus coagulans 2-6]
gi|335367042|gb|AEH52993.1| ATPase AAA-2 domain protein [Bacillus coagulans 2-6]
Length = 718
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 17/174 (9%)
Query: 617 LDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
L+ D K+L ++L +KV Q EA VA + + + G K R GS LF+G
Sbjct: 412 LEADEAKKLQHLEENLAKKVIGQDEAVRKVAKAIRRSRAGLKAKSRPIGS-----FLFVG 466
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEA 724
P VGK ++ L+E + G MI L E+ V G ++ E
Sbjct: 467 PTGVGKTELTKRLAEELFGTKDAMIRLDMSEYMEKHSVSKLIGAPAGYVGYEDAGQLTEK 526
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V+RNP+S+ILL++I++A V + ++ GRL D+ GR +S + + I+T++
Sbjct: 527 VRRNPYSIILLDEIEKAHPDVLNMFLQILDDGRLTDAQGRTVSFKDTVIIMTSN 580
>gi|423718349|ref|ZP_17692531.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
gi|383365159|gb|EID42460.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
Length = 810
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 27/209 (12%)
Query: 589 VKDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
V+D +SS P KL +++ ++L K L + L +V Q EA AVA
Sbjct: 473 VEDIAMVVSSWTGIPVAKLAQTETERLLK---------LEEILHSRVVGQDEAVKAVAKA 523
Query: 647 VTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDH 705
V + + G +R GS +F+GP VGK ++A AL+E + G +I + ++
Sbjct: 524 VRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAEAMFGDEDALIRI-DMSEY 577
Query: 706 EEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERG 756
E R G ++ G E V+R P+SV+LL+++++A V + + +E G
Sbjct: 578 MEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDG 637
Query: 757 RLVDSYGREISLGNVIFILTADWLPDSLK 785
RL DS GR + N I I+T++ D+LK
Sbjct: 638 RLTDSKGRTVDFRNTIIIMTSNVGADALK 666
>gi|312109233|ref|YP_003987549.1| ATPase AAA [Geobacillus sp. Y4.1MC1]
gi|336233627|ref|YP_004586243.1| ATPase AAA-2 domain-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311214334|gb|ADP72938.1| ATPase AAA-2 domain protein [Geobacillus sp. Y4.1MC1]
gi|335360482|gb|AEH46162.1| ATPase AAA-2 domain protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 812
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 27/209 (12%)
Query: 589 VKDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
V+D +SS P KL +++ ++L K L + L +V Q EA AVA
Sbjct: 475 VEDIAMVVSSWTGIPVAKLAQTETERLLK---------LEEILHSRVVGQDEAVKAVAKA 525
Query: 647 VTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDH 705
V + + G +R GS +F+GP VGK ++A AL+E + G +I + ++
Sbjct: 526 VRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAEAMFGDEDALIRI-DMSEY 579
Query: 706 EEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERG 756
E R G ++ G E V+R P+SV+LL+++++A V + + +E G
Sbjct: 580 MEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDG 639
Query: 757 RLVDSYGREISLGNVIFILTADWLPDSLK 785
RL DS GR + N I I+T++ D+LK
Sbjct: 640 RLTDSKGRTVDFRNTIIIMTSNVGADALK 668
>gi|58336963|ref|YP_193548.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
acidophilus NCFM]
gi|58254280|gb|AAV42517.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
acidophilus NCFM]
Length = 728
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
++ V P SP+ TD ++ +K++E EKT I PV D + + + +QLQ
Sbjct: 387 DQKVDPDKSPIITDKIM--NKIVE---EKTGI-PVGD-------------IQKQEENQLQ 427
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
L L V Q +A VA + + ++G N R GS LF+GP
Sbjct: 428 N---------LASDLKSNVIGQDKAVEKVARAIRRNRIGFNKSGRPIGS-----FLFVGP 473
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAV 725
VGK ++A L++ + G+ MI E+ V G ++ E V
Sbjct: 474 TGVGKTELAKQLAKQMFGSEDAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTEQV 533
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ NP+S+ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 534 RHNPYSLILLDEIEKAHPDVLNLFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 586
>gi|33860767|ref|NP_892328.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33633709|emb|CAE18666.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
ClpB [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 919
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 22/188 (11%)
Query: 631 EKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELV 689
EKV Q++A AV++ + + ++G +R GS LFMGP VGK ++A +L+ +
Sbjct: 617 EKVIGQEKAIKAVSSAIRRARVGMKNPKRPIGS-----FLFMGPTGVGKTELAKSLASSL 671
Query: 690 SGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEA 741
++ L E+ V G ++ EAV+R P+SVILL++I++A
Sbjct: 672 FDEEEALLRLDMSEYMEKNAVARLLGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKA 731
Query: 742 DMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSL 801
V + + ++ GRL DS GR + N + I+T++ L+ I L++ K+ +
Sbjct: 732 HSEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSN--------LAGKIILEDSKIITN 783
Query: 802 ASGEWQLR 809
+LR
Sbjct: 784 QKENSELR 791
>gi|421611123|ref|ZP_16052274.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SH28]
gi|408497937|gb|EKK02445.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SH28]
Length = 859
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 17/174 (9%)
Query: 624 RLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKK 679
RLLK L ++V Q +A +AVA V + + G +R GS +F GP VGK
Sbjct: 517 RLLKMEEELHKRVVSQSQAVTAVAKAVRRSRSGLKDPKRPTGS-----FIFAGPTGVGKT 571
Query: 680 KMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFS 731
+A AL+E + G + ++ + E+ V G ++ E ++R P++
Sbjct: 572 LLAKALAEYMFGDADALVHIDMSEYMEKHNVSRLIGAPPGFVGYEEGGQLTEKIRRRPYA 631
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
V+L ++I++A V + + ME GRL DS+GR + N I I+T + +++K
Sbjct: 632 VVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTILIMTTNAGAEAIK 685
>gi|342216055|ref|ZP_08708702.1| ATP-dependent chaperone protein ClpB [Peptoniphilus sp. oral taxon
375 str. F0436]
gi|341586945|gb|EGS30345.1| ATP-dependent chaperone protein ClpB [Peptoniphilus sp. oral taxon
375 str. F0436]
Length = 856
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL +++ D+L L DS L ++V+ Q EA AV+ V + + G + R
Sbjct: 543 PVAKLAQTERDKL---LQMDSL------LKKRVFGQDEAIDAVSDAVLRARAGLKAQNRP 593
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK--- 715
GS +F+GP VGK + A AL+EL+ MI + E+ V R+ G
Sbjct: 594 IGS-----FIFLGPTGVGKTETAKALTELLFDDERNMIRIDMSEYMEKHSVSRLVGSPPG 648
Query: 716 -TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R P+SVIL ++I++A V + + ++ GRL D+ GR + N
Sbjct: 649 YVGYDEGGQLTEAVRRAPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDNQGRTVDFKNT 708
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 709 VIIMTSN 715
>gi|229488549|ref|ZP_04382415.1| ATPase family protein protein [Rhodococcus erythropolis SK121]
gi|229324053|gb|EEN89808.1| ATPase family protein protein [Rhodococcus erythropolis SK121]
Length = 807
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 608 SQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDM 666
SQ Q +K D +RL + L +V Q +A A+A V + + G + R GS
Sbjct: 491 SQMTQAEK----DRLRRLEEELHGRVIGQDDAVRAIARAVRRSRTGMSDPDRPVGS---- 542
Query: 667 WLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTAL 718
LF+GP VGK ++A AL+ + G M+ E V G
Sbjct: 543 -FLFLGPTGVGKTELAKALAATLFGDENKMLRFDMSEFGERHTVSRLVGAPPGYVGYGEA 601
Query: 719 DKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++ E V+RNP+SVILL++I++A V + + ++ GRL D GR + N + I+T++
Sbjct: 602 GQLTEQVRRNPYSVILLDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNTVVIMTSN 661
Query: 779 WLPDSLKFLSQGI 791
D + S G+
Sbjct: 662 LGSDIISSKSGGL 674
>gi|374372910|ref|ZP_09630571.1| ATP-dependent chaperone ClpB [Niabella soli DSM 19437]
gi|373234986|gb|EHP54778.1| ATP-dependent chaperone ClpB [Niabella soli DSM 19437]
Length = 867
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NK+ ES+ ++L L + L ++V Q+EA +AVA + + + G + R+
Sbjct: 545 PVNKMLESEREKLL---------HLEEHLHQRVVGQEEAITAVADAIRRSRAGLSDPRKP 595
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+G VGK ++A AL+E + +M + +++E R
Sbjct: 596 IGS-----FIFLGTTGVGKTELAKALAEYLFDDESMMTRI-DMSEYQEKHTVSRLVGAPP 649
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+LL++I++A+ V + + ++ GRL D+ GR ++ N
Sbjct: 650 GYVGYDEGGQLTEAVRRKPYSVVLLDEIEKANPDVWNVLLQVLDDGRLTDNKGRVVNFKN 709
Query: 771 VIFILTAD 778
I I+T++
Sbjct: 710 TIIIMTSN 717
>gi|291452826|ref|ZP_06592216.1| chaperone [Streptomyces albus J1074]
gi|291355775|gb|EFE82677.1| chaperone [Streptomyces albus J1074]
Length = 844
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMA 682
+L +L +V Q EA +AV+ V + + G G R GS LF+GP VGK ++A
Sbjct: 513 KLEDALHSRVVGQDEAVTAVSQAVRRSRAGMGDPNRPTGS-----FLFLGPTGVGKTELA 567
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
AL+EL+ G M+ E+ V G ++ E V+R P+SV+L
Sbjct: 568 KALAELLFGDENRMVRFDMSEFQEKHTVSRLVGAPPGYVGHEEAGQLTEKVRRQPYSVLL 627
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + ++ GRL D+ GR + N + I+T++
Sbjct: 628 FDEIEKAHPDVFNALLQVLDDGRLTDAQGRTVDFRNTVVIMTSN 671
>gi|398992528|ref|ZP_10695493.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM21]
gi|398136829|gb|EJM25907.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM21]
Length = 854
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 119/234 (50%), Gaps = 34/234 (14%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +++ L RSKV E+ E V + G P +K+ E + D+L
Sbjct: 510 ERSLQMVDQHGKSENQLLRSKV----TEEEIAEVVSKWTGI-----PVSKMLEGERDKLM 560
Query: 615 KPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
K ++SL+ ++V Q EA AV+ V + + G + R +GS +F+G
Sbjct: 561 K----------MESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGS-----FMFLG 605
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EA 724
P VGK ++ AL+E + M+ + E+ V R+ G ++ G EA
Sbjct: 606 PTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEA 665
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V+R P+SVILL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 666 VRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSN 719
>gi|115373007|ref|ZP_01460310.1| negative regulator of genetic competence ClpC/mecB [Stigmatella
aurantiaca DW4/3-1]
gi|115369919|gb|EAU68851.1| negative regulator of genetic competence ClpC/mecB [Stigmatella
aurantiaca DW4/3-1]
Length = 783
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 13/190 (6%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
D + L L ++V +EA + +A + + G RR GS LF+GP VG
Sbjct: 468 DSERLLSLEADLGQRVIGHEEAVARIARVIRRNYAGFASRRPMGS-----FLFLGPTGVG 522
Query: 678 KKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGKTAL-------DKIGEAVKRNP 729
K +MA AL+E++ G ++ L E V R+ G A ++ E ++R P
Sbjct: 523 KTEMARALAEVLFGNRDALVRLDMSEMAESHGVSRLIGSPAGYVGYGDGGQLTEPIRRKP 582
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQ 789
SV++L++I++A V+ + + +E GRL D GR I N + ++T + ++ +S+
Sbjct: 583 SSVVVLDEIEKAHREVQMLLLQVLEEGRLTDGKGRHIDFSNTVIVMTTNLGSEAFSRVSK 642
Query: 790 GITLDEKKLT 799
+ LT
Sbjct: 643 TLGFGSAALT 652
>gi|449134535|ref|ZP_21770031.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
europaea 6C]
gi|448886810|gb|EMB17203.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
europaea 6C]
Length = 847
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 17/174 (9%)
Query: 624 RLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKK 679
RLLK L ++V Q +A +AVA V + + G +R GS +F GP VGK
Sbjct: 505 RLLKMEEELHKRVVSQSQAVTAVAKAVRRSRSGLKDPKRPTGS-----FIFAGPTGVGKT 559
Query: 680 KMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFS 731
+A AL+E + G + ++ + E+ V G ++ E ++R P++
Sbjct: 560 LLAKALAEYMFGDADALVHIDMSEYMEKHNVSRLIGAPPGFVGYEEGGQLTEKIRRRPYA 619
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
V+L ++I++A V + + ME GRL DS+GR + N I I+T + +++K
Sbjct: 620 VVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTILIMTTNAGAEAIK 673
>gi|238854918|ref|ZP_04645248.1| ClpE [Lactobacillus jensenii 269-3]
gi|238832708|gb|EEQ25015.1| ClpE [Lactobacillus jensenii 269-3]
Length = 701
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 59/278 (21%)
Query: 527 PFQPKVQLNRNLGDTLQLNSNMVSSQPAERA-----------------VSPLNSPVRTDL 569
PF K ++ + QL + + ++ E+A V P SPV TD
Sbjct: 317 PFVDKEKIKERIDAAQQLKQDALKNEDYEKAAYYRDQIEKYDKMKDQKVDPDKSPVITDK 376
Query: 570 VLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSL 629
++ +K++E EKT I PV D + + + +QLQ L L
Sbjct: 377 IM--NKIVE---EKTGI-PVGD-------------IQKQEENQLQN---------LASDL 408
Query: 630 MEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSEL 688
KV Q +A VA + + ++G N R GS LF+GP VGK ++A ++
Sbjct: 409 KAKVIGQDKAVEQVARAIRRNRIGFNKSGRPIGS-----FLFVGPTGVGKTELAKQVALK 463
Query: 689 VSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDE 740
+ G++ MI E+ V G ++ E V+ NP+S+ILL++I++
Sbjct: 464 MFGSTDAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTERVRHNPYSLILLDEIEK 523
Query: 741 ADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
A V + ++ GRL DS GR +S + I I+T++
Sbjct: 524 AHPDVLNLFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 561
>gi|123965471|ref|YP_001010552.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9515]
gi|123199837|gb|ABM71445.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
ClpB [Prochlorococcus marinus str. MIT 9515]
Length = 915
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 14/157 (8%)
Query: 631 EKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELV 689
EKV Q++A AV++ + + ++G +R GS LFMGP VGK ++A +L+ +
Sbjct: 613 EKVIGQKKAIEAVSSAIRRARVGMKNPKRPVGS-----FLFMGPTGVGKTELAKSLASSL 667
Query: 690 SGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEA 741
++ L E+ V G ++ EAV+R P+SVILL++I++A
Sbjct: 668 FDEEEALLRLDMSEYMEKNAVARLLGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKA 727
Query: 742 DMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V + + ++ GRL DS GR + N + I+T++
Sbjct: 728 HSEVFNVLLQVLDEGRLTDSQGRTVDFKNTVIIMTSN 764
>gi|395795264|ref|ZP_10474573.1| ATP-dependent chaperone protein ClpB [Pseudomonas sp. Ag1]
gi|421142087|ref|ZP_15602063.1| ClpB protein [Pseudomonas fluorescens BBc6R8]
gi|395340627|gb|EJF72459.1| ATP-dependent chaperone protein ClpB [Pseudomonas sp. Ag1]
gi|404506481|gb|EKA20475.1| ClpB protein [Pseudomonas fluorescens BBc6R8]
Length = 854
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRR 658
P +K+ E + D+L K ++SL+ ++V Q+EA AV+ V + + G + R
Sbjct: 547 PVSKMLEGERDKLLK----------MESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNR 596
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK-- 715
+GS +F+GP VGK ++ AL+E + M+ + E+ V R+ G
Sbjct: 597 PSGS-----FMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPP 651
Query: 716 --TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
++ G EAV+R P+SVILL+++++A V + + +E GRL DS+GR + N
Sbjct: 652 GYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRN 711
Query: 771 VIFILTAD 778
+ ++T++
Sbjct: 712 TVIVMTSN 719
>gi|377567178|ref|ZP_09796416.1| chaperone ClpB [Gordonia sputi NBRC 100414]
gi|377525616|dbj|GAB41581.1| chaperone ClpB [Gordonia sputi NBRC 100414]
Length = 850
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 147/352 (41%), Gaps = 73/352 (20%)
Query: 572 GRSKVLESAPEKTHIEPVKDFLGCISSEP-------------PQNKLHESQNDQLQKPLD 618
G K LE+A EKT +P +D + P P K+ E + +L
Sbjct: 509 GLEKELEAAIEKTGTDPDEDVMLQEEVGPDDVAQVVSAWTGIPAGKMLEGETAKLL---- 564
Query: 619 PDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVG 677
R+ L ++V Q++A AV+ V + + G R GS LF+GP VG
Sbjct: 565 -----RMEDELGQRVIGQKDAVVAVSDAVRRARAGVADPNRPLGS-----FLFLGPTGVG 614
Query: 678 KKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRN 728
K ++A AL+E + M+ + ++ E R G ++ G EAV+R
Sbjct: 615 KTELAKALAEFLFDDERAMVRI-DMSEYGEKHAVARLVGAPPGYVGYEQGGQLTEAVRRR 673
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT------------ 776
P++V+L +++++A V + + ++ GRL D GR + N I ILT
Sbjct: 674 PYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTILILTSNLGSGGDKDQV 733
Query: 777 -----ADWLPDSLKFLSQGITLDE---KKLTSLAS---GEWQLRLSIRG---KTTKRRAS 822
A + P+ + L + D ++L S+ G+ Q RL+ R + T +
Sbjct: 734 MAAVRAAFKPEFINRLDDVVIFDALSPEELVSIVDIQLGQLQKRLAQRRLELQVTPKAKE 793
Query: 823 WLDEEERSTKP-------RKETGSGLSFDLNKAADVGDDKDGSHNSSDLTVD 867
WL ER P R+ + L +A GD +DG S D++ D
Sbjct: 794 WL--AERGFDPLYGARPLRRLVQQAIGDKLARALLAGDVRDGDVVSVDVSAD 843
>gi|357052633|ref|ZP_09113738.1| hypothetical protein HMPREF9467_00710 [Clostridium clostridioforme
2_1_49FAA]
gi|355386466|gb|EHG33505.1| hypothetical protein HMPREF9467_00710 [Clostridium clostridioforme
2_1_49FAA]
Length = 861
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 26/208 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++++L + L L ++V Q+EA +A++ + + ++G +R
Sbjct: 493 PVRKLAEEESERL---------RNLEGILHQRVVGQEEAVTAISKAIRRGRVGLKDPKRP 543
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ ALSE + G +I + E+ V G
Sbjct: 544 IGS-----FLFLGPTGVGKTELSKALSEAMFGTENALIRVDMSEYMEKHSVSKMIGSPPG 598
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+RNP+SVIL ++I++A V + + ++ G + D+ GR+I N
Sbjct: 599 YVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKIDFKNT 658
Query: 772 IFILTADWLPDSL---KFLSQGITLDEK 796
I I+T++ +++ K L G+ D K
Sbjct: 659 IIIMTSNAGAENIISPKRLGFGMVSDAK 686
>gi|227903521|ref|ZP_04021326.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
acidophilus ATCC 4796]
gi|227868408|gb|EEJ75829.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
acidophilus ATCC 4796]
Length = 728
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
++ V P SP+ TD ++ +K++E EKT I PV D + + + +QLQ
Sbjct: 387 DQKVDPDKSPIITDKIM--NKIVE---EKTGI-PVGD-------------IQKQEENQLQ 427
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
L L V Q +A VA + + ++G N R GS LF+GP
Sbjct: 428 N---------LASDLKSNVIGQDKAVEKVARAIRRNRIGFNKSGRPIGS-----FLFVGP 473
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAV 725
VGK ++A L++ + G+ MI E+ V G ++ E V
Sbjct: 474 TGVGKTELAKQLAKQMFGSEDAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTEQV 533
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ NP+S+ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 534 RHNPYSLILLDEIEKAHPDVLNLFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 586
>gi|407368577|ref|ZP_11115109.1| chaperone ClpB [Pseudomonas mandelii JR-1]
Length = 854
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 36/235 (15%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +++ L RSKV E+ E V + G P +K+ E + D+L
Sbjct: 510 ERSLQMVDQHGKSENQLLRSKV----TEEEIAEVVSKWTGI-----PVSKMLEGERDKLM 560
Query: 615 KPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
K ++SL+ ++V Q EA AV+ V + + G + R +GS +F+G
Sbjct: 561 K----------MESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGS-----FMFLG 605
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---E 723
P VGK ++ AL+E + M+ + E+ V R G ++ G E
Sbjct: 606 PTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAPPGYVGYEEGGYLTE 664
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
AV+R P+SVILL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 665 AVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSN 719
>gi|421894145|ref|ZP_16324636.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
pentosaceus IE-3]
gi|385272973|emb|CCG90008.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
pentosaceus IE-3]
Length = 821
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 38/224 (16%)
Query: 575 KVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVW 634
K++E+ + I V D+ G P ++ +S++D+L L K+L E+V
Sbjct: 475 KLIENGEDIAQI--VSDWTGV-----PLTQMKQSESDRLIN---------LEKTLHERVI 518
Query: 635 WQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGAS 693
Q+EA S+VA + + + G +R GS +F+GP VGK ++A +L++++ G+
Sbjct: 519 GQEEAVSSVARAIRRARSGLKSPKRPIGS-----FMFLGPTGVGKTELAKSLADIMFGSE 573
Query: 694 PIMIPLGPRRDHEEPEVRVR---------GKTALDKIG---EAVKRNPFSVILLEDIDEA 741
MI R D E R G D+ G E V+R P+SV+L +++++A
Sbjct: 574 DNMI----RIDMSEYMERYSTSRLVGSAPGYVGYDEGGQLTEQVRRKPYSVVLFDEVEKA 629
Query: 742 DMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
V + + + G L DS GR + N I I+T++ +L+
Sbjct: 630 HPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNLGATALR 673
>gi|347758181|ref|YP_004865743.1| ATP-dependent chaperone ClpB [Micavibrio aeruginosavorus ARL-13]
gi|347590699|gb|AEP09741.1| ATP-dependent chaperone ClpB [Micavibrio aeruginosavorus ARL-13]
Length = 870
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 23/193 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +K+ E + D+L K + + LME+V Q+ A AV+ V + + G RR
Sbjct: 549 PVDKMLEGERDKLLK---------MDEKLMERVVGQEAAVHAVSNAVRRARAGLQDPRRP 599
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK ++ AL+E + +I L E+ V G
Sbjct: 600 IGS-----FLFLGPTGVGKTELTKALAEFLFDDDTALIRLDMSEYMEKHSVARMIGAPPG 654
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
++ G EAV+R P+ V+L +++++A V + + ++ GRL D GR + N
Sbjct: 655 YVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFSNT 714
Query: 772 IFILTADWLPDSL 784
+ I+T++ D L
Sbjct: 715 VLIMTSNLGADHL 727
>gi|153855899|ref|ZP_01996861.1| hypothetical protein DORLON_02886 [Dorea longicatena DSM 13814]
gi|149751802|gb|EDM61733.1| ATPase family associated with various cellular activities (AAA)
[Dorea longicatena DSM 13814]
Length = 811
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 99/187 (52%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P ++L ES++ +L K L ++L ++V Q EA +AVA ++ + ++G +R
Sbjct: 487 PVSRLAESESAKLNK---------LEQTLHKRVIGQDEAVTAVAKSIKRGRVGLKDPKRP 537
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ AL+E + G MI + E+ V G
Sbjct: 538 IGS-----FLFLGPTGVGKTELSKALAEALFGDENSMIRVDMSEYMEKHSVAKMIGSPPG 592
Query: 715 KTALD---KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D ++ E V+R+P+SV+L ++I++A V + + ++ G + DS GR++ N
Sbjct: 593 YVGHDDGGQLSEQVRRHPYSVVLFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFSNT 652
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 653 VIIMTSN 659
>gi|417304237|ref|ZP_12091266.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica WH47]
gi|440716927|ref|ZP_20897429.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SWK14]
gi|327539449|gb|EGF26064.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica WH47]
gi|436437995|gb|ELP31577.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SWK14]
Length = 847
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 17/174 (9%)
Query: 624 RLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKK 679
RLLK L ++V Q +A +AVA V + + G +R GS +F GP VGK
Sbjct: 505 RLLKMEEELHKRVVSQSQAVTAVAKAVRRSRSGLKDPKRPTGS-----FIFAGPTGVGKT 559
Query: 680 KMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFS 731
+A AL+E + G + ++ + E+ V G ++ E ++R P++
Sbjct: 560 LLAKALAEYMFGDADALVHIDMSEYMEKHNVSRLIGAPPGFVGYEEGGQLTEKIRRRPYA 619
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
V+L ++I++A V + + ME GRL DS+GR + N I I+T + +++K
Sbjct: 620 VVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTILIMTTNAGAEAIK 673
>gi|262340850|ref|YP_003283705.1| chaperone ClpB [Blattabacterium sp. (Blattella germanica) str. Bge]
gi|262272187|gb|ACY40095.1| chaperone ClpB [Blattabacterium sp. (Blattella germanica) str. Bge]
Length = 879
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 129/292 (44%), Gaps = 28/292 (9%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L K L +V Q +A +VA + + + G ++R GS LFMG VGK ++A
Sbjct: 564 LEKELHRRVIGQNDAIQSVADAIRRSRAGLQDEKRPIGS-----FLFMGSTGVGKTELAK 618
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILL 735
L+E M+ + E V G D+ G EA++R P+SVILL
Sbjct: 619 TLAEYFIDDENNMVRIDMSEYQERHSVSRLIGAPPGYIGYDESGQLTEAIRRRPYSVILL 678
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILT----ADWLPDSLKFLSQGI 791
++I++A + + + ++ GRL D+ GR ++ N I I+T AD + D+ L Q I
Sbjct: 679 DEIEKAHSDILNILLQVLDDGRLTDNKGRTVNFTNTIIIMTSNIGADIIQDN---LDQEI 735
Query: 792 TLDEKKLTSLASGEWQLRLSIRGKTTKRRASWLDEEERSTKP--RKETGSGLSFDLNKAA 849
+ ++ + L +R + +D E KP RKE + + K
Sbjct: 736 SYTYNRMEATKKALIDL---LRNIVKPEFINRID-EIILFKPLSRKEIRDIVKLQMKKLG 791
Query: 850 DVGDDKDGSH-NSSDLTVDHEEEHGFTNRLLMTPSTSTPSQDLLNSVDSAIV 900
D+ +K H S+ +++ E G+ + P D+LN++ I+
Sbjct: 792 DLLLNKKNIHIESTHEAIEYLSEKGYDSHFGARPLKRVIQHDILNNLSKEIL 843
>gi|389574891|ref|ZP_10164943.1| endopeptidase ClpE [Bacillus sp. M 2-6]
gi|388425469|gb|EIL83302.1| endopeptidase ClpE [Bacillus sp. M 2-6]
Length = 665
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +V Q+ A VA V + + G K R GS LF+GP VGK +++ L+E
Sbjct: 371 LKARVIGQEHAVEKVAKAVKRSRAGLKSKHRPTGS-----FLFVGPTGVGKTELSKTLAE 425
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ G+ +I L E+ V G ++ E V+R P+S+ILL++I+
Sbjct: 426 ELFGSKEAIIRLDMSEYMEKHSVSKIIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIE 485
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 486 KAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 524
>gi|377563590|ref|ZP_09792937.1| chaperone ClpB [Gordonia sputi NBRC 100414]
gi|377529212|dbj|GAB38102.1| chaperone ClpB [Gordonia sputi NBRC 100414]
Length = 876
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 28/204 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L E + ++L K L + L E+V Q EA VA V + + G RR
Sbjct: 557 PVARLQEGEREKLLK---------LDEILHERVIGQDEAVQLVADAVIRARSGIRDPRRP 607
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A L+ + + M+ L +++E R
Sbjct: 608 IGS-----FIFLGPTGVGKTELAKTLASALFDSEDNMVRL-DMSEYQERHTVSRLIGAPP 661
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+L ++I++A V + + ++ GR+ DS GR++ N
Sbjct: 662 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRN 721
Query: 771 VIFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 722 TVIIMTSNI---GSQHLLEGVTAD 742
>gi|345893543|ref|ZP_08844339.1| chaperone ClpB [Desulfovibrio sp. 6_1_46AFAA]
gi|345046102|gb|EGW49996.1| chaperone ClpB [Desulfovibrio sp. 6_1_46AFAA]
Length = 867
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L ES+ ++L RL + L E+V Q EA +AV+ V + + G + R
Sbjct: 554 PVTRLLESEREKLL---------RLSEQLHERVVGQDEAVNAVSDAVLRARAGLSDPSRP 604
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS +F+GP VGK +++ AL+E + M+ L E+ V G
Sbjct: 605 TGS-----FIFLGPTGVGKTELSKALAEALFDTEDNMVRLDMSEYMEKHSVSRLIGAPPG 659
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R P+SVIL ++I++A V + + ++ GRL DS GR + N
Sbjct: 660 YVGYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNTLLQLLDDGRLTDSQGRTVDFRNC 719
Query: 772 IFILTAD 778
I I+T++
Sbjct: 720 IVIMTSN 726
>gi|325263684|ref|ZP_08130418.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
D5]
gi|324031393|gb|EGB92674.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
D5]
Length = 814
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL ES D D K+L + L ++V Q+EA +AVA V + ++G +R
Sbjct: 489 PVQKLAES---------DTDRLKKLEQVLHKRVVGQEEAVNAVARAVKRGRVGLKDPKRP 539
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ AL+E + G MI + E+ V
Sbjct: 540 IGS-----FLFLGPTGVGKTELSKALAEAMFGNEESMIRVDMSEYMEKHSVSKMIGSPPG 594
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ + V+ +P+SVIL +++++A V + + ++ G + DS GR++ N
Sbjct: 595 YVGHEEGGQLSDQVRTHPYSVILFDEVEKAHPDVFNILLQVLDDGHITDSQGRKVDFCNT 654
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 655 VIIMTSN 661
>gi|398349331|ref|ZP_10534034.1| ATP-dependent protease ClpA [Leptospira broomii str. 5399]
Length = 856
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 27/200 (13%)
Query: 591 DFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D L +S + P ++ ES++++L RL L +V Q +A +A V
Sbjct: 496 DILSVVSQWTGIPLQRMEESESERLL---------RLEDELKLRVVGQDDAIEKIAKAVR 546
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +RR GS +F+GP VGK ++A AL++ + G M+ + ++ E
Sbjct: 547 RARTGFKAERRPTGS-----FIFLGPTGVGKTELAKALADFLFGDQDAMLRVD-MSEYME 600
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
P R G D G E V++ P+S+ILL++I++A + + + ME G L
Sbjct: 601 PHAVSRLIGAPPGYVGYDDGGQLTEFVRKKPYSIILLDEIEKAHHDIFNILLQVMEEGNL 660
Query: 759 VDSYGREISLGNVIFILTAD 778
D+ GR+++ + I I+T++
Sbjct: 661 TDTKGRKVNFRDTIIIMTSN 680
>gi|395499146|ref|ZP_10430725.1| ATP-dependent chaperone protein ClpB [Pseudomonas sp. PAMC 25886]
Length = 854
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 27/189 (14%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRR 658
P +K+ E + D+L K ++SL+ ++V Q+EA AV+ V + + G + R
Sbjct: 547 PVSKMLEGERDKLLK----------MESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNR 596
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR----- 713
+GS +F+GP VGK ++ AL+E + M+ + E+ V R
Sbjct: 597 PSGS-----FMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAP 650
Query: 714 -GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLG 769
G ++ G EAV+R P+SVILL+++++A V + + +E GRL DS+GR +
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFR 710
Query: 770 NVIFILTAD 778
N + ++T++
Sbjct: 711 NTVIVMTSN 719
>gi|419964527|ref|ZP_14480483.1| ATP-dependent chaperone ClpB [Rhodococcus opacus M213]
gi|414570109|gb|EKT80846.1| ATP-dependent chaperone ClpB [Rhodococcus opacus M213]
Length = 877
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 28/204 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L E + ++L K L + L E+V Q EA VA V + + G RR
Sbjct: 557 PVARLQEGEREKLLK---------LDEILHERVVGQDEAVQLVADAVIRARSGIRDPRRP 607
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A L+ + + M+ L +++E R
Sbjct: 608 IGS-----FIFLGPTGVGKTELAKTLASALFDSEDNMVRL-DMSEYQERHTVSRLIGAPP 661
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+L ++I++A V + + ++ GR+ DS GR++ N
Sbjct: 662 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRN 721
Query: 771 VIFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 722 TVIIMTSNI---GSQHLLEGVTAD 742
>gi|423314674|ref|ZP_17292607.1| hypothetical protein HMPREF1058_03219 [Bacteroides vulgatus
CL09T03C04]
gi|392682003|gb|EIY75358.1| hypothetical protein HMPREF1058_03219 [Bacteroides vulgatus
CL09T03C04]
Length = 838
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L+ KV Q +A + + + + ++G + G+ +F+GP VGK +A L++
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKDPNKPIGT-----FMFLGPTGVGKTHLAKELAK 588
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
L+ G++ +I + E+ V G ++ E V+R P+S++LL++I+
Sbjct: 589 LMFGSADALIRIDMSEYMEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIVLLDEIE 648
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGI 791
+A V + + M+ GRL DSYGR + N I I+T++ LK +GI
Sbjct: 649 KAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIIIMTSNIGTRQLKEFGKGI 700
>gi|428299923|ref|YP_007138229.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 6303]
gi|428236467|gb|AFZ02257.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 6303]
Length = 889
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ QK L +S L ++V QQEA AV+ + + + G R
Sbjct: 556 PVNRLLESER---QKLLQLESH------LHQRVIGQQEALEAVSAAIRRARAGMKDPNRP 606
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +FMGP VGK ++A AL++ + A +I L E+ V
Sbjct: 607 IGS-----FMFMGPTGVGKTELARALAQFLFDAEDALIRLDMSEYMEKHSVSRLVGAPPG 661
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R P+SV+LL+++++A V + + ++ GR+ DS GR + N
Sbjct: 662 YVGYEEGGQLSETVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFQNT 721
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 722 VIVMTSN 728
>gi|431792439|ref|YP_007219344.1| chaperone ATPase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430782665|gb|AGA67948.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 827
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
RL +L ++V Q++A AV+ V + + G +R GS +F+GP VGK ++A
Sbjct: 509 RLEDTLHQRVVGQEDAVKAVSRAVRRARAGLKDPKRPVGS-----FIFLGPTGVGKTELA 563
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
AL+E + G ++ + E+ V G ++ EA++R P+SVIL
Sbjct: 564 RALAEALFGEEDALVRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLTEAIRRKPYSVIL 623
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
L++I++A V + + +E GRL D+ GR + N + I+T++
Sbjct: 624 LDEIEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNAVIIMTSN 667
>gi|303327880|ref|ZP_07358320.1| ATP-dependent chaperone protein ClpB [Desulfovibrio sp. 3_1_syn3]
gi|302862241|gb|EFL85175.1| ATP-dependent chaperone protein ClpB [Desulfovibrio sp. 3_1_syn3]
Length = 867
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L ES+ ++L RL + L E+V Q EA +AV+ V + + G + R
Sbjct: 554 PVTRLLESEREKLL---------RLSEQLHERVVGQDEAVNAVSDAVLRARAGLSDPSRP 604
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS +F+GP VGK +++ AL+E + M+ L E+ V G
Sbjct: 605 TGS-----FIFLGPTGVGKTELSKALAEALFDTEDNMVRLDMSEYMEKHSVSRLIGAPPG 659
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R P+SVIL ++I++A V + + ++ GRL DS GR + N
Sbjct: 660 YVGYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNTLLQLLDDGRLTDSQGRTVDFRNC 719
Query: 772 IFILTAD 778
I I+T++
Sbjct: 720 IVIMTSN 726
>gi|408483875|ref|ZP_11190094.1| chaperone [Pseudomonas sp. R81]
Length = 854
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRR 658
P +K+ E + D+L K ++SL+ ++V Q+EA AV+ V + + G + R
Sbjct: 547 PVSKMLEGERDKLLK----------MESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNR 596
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK-- 715
+GS +F+GP VGK ++ AL+E + M+ + E+ V R+ G
Sbjct: 597 PSGS-----FMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPP 651
Query: 716 --TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
++ G EAV+R P+SVILL+++++A V + + +E GRL DS+GR + N
Sbjct: 652 GYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRN 711
Query: 771 VIFILTAD 778
+ ++T++
Sbjct: 712 TVIVMTSN 719
>gi|377559991|ref|ZP_09789520.1| chaperone ClpB [Gordonia otitidis NBRC 100426]
gi|377522859|dbj|GAB34685.1| chaperone ClpB [Gordonia otitidis NBRC 100426]
Length = 876
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 28/204 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L E + ++L K L + L E+V Q EA VA V + + G RR
Sbjct: 557 PVARLQEGEREKLLK---------LDEILHERVIGQDEAVQLVADAVIRARSGIRDPRRP 607
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A L+ + + M+ L +++E R
Sbjct: 608 IGS-----FIFLGPTGVGKTELAKTLASALFDSEDNMVRL-DMSEYQERHTVSRLIGAPP 661
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+L ++I++A V + + ++ GR+ DS GR++ N
Sbjct: 662 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRN 721
Query: 771 VIFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 722 TVIIMTSNI---GSQHLLEGVTAD 742
>gi|386867604|ref|YP_006280598.1| ATP-dependent chaperone ClpB [Bifidobacterium animalis subsp.
animalis ATCC 25527]
gi|385701687|gb|AFI63635.1| ATP-dependent chaperone ClpB [Bifidobacterium animalis subsp.
animalis ATCC 25527]
Length = 895
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L + +N++L L+ + + L ++V Q EA AV+ V + + G + R
Sbjct: 555 PVGRLMQGENEKL---LNMEEY------LNKRVIGQPEAVRAVSDAVRRSRAGLSDPNRP 605
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-----VRG 714
GS LFMGP VGK ++A AL+E + MI + E+ V G
Sbjct: 606 TGS-----FLFMGPTGVGKTELAKALAEFLFDDEKAMIRIDMSEYMEKSSVSRLIGAAPG 660
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R P+SV+L +++++A+ V + + ++ GRL D GR + N
Sbjct: 661 YVGYDEGGQLTEAVRRRPYSVVLFDEVEKANSEVFDILLQVLDDGRLTDGQGRTVDFKNT 720
Query: 772 IFILTAD 778
I I+T++
Sbjct: 721 ILIMTSN 727
>gi|440682311|ref|YP_007157106.1| ATP-dependent chaperone ClpB [Anabaena cylindrica PCC 7122]
gi|428679430|gb|AFZ58196.1| ATP-dependent chaperone ClpB [Anabaena cylindrica PCC 7122]
Length = 894
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ QK L +S L E+V Q+EA SAV+ + + + G R
Sbjct: 561 PVNRLLESER---QKLLQLESH------LHERVIGQEEAVSAVSAAIRRARAGMKDPSRP 611
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LFMGP VGK ++A AL++ + + ++ L E+ V
Sbjct: 612 IGS-----FLFMGPTGVGKTELARALAQFLFDSDDALVRLDMSEYMEKHSVSRLVGAPPG 666
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E+++R+P+SV+LL+++++A V + + ++ GR+ DS GR + N
Sbjct: 667 YIGYEEGGQLSESIRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRVTDSQGRAVDFRNT 726
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 727 VIVMTSN 733
>gi|387892000|ref|YP_006322297.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens A506]
gi|387162601|gb|AFJ57800.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens A506]
Length = 854
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 27/189 (14%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRR 658
P +K+ E + D+L K ++SL+ ++V Q+EA AV+ V + + G + R
Sbjct: 547 PVSKMLEGERDKLLK----------MESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNR 596
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR----- 713
+GS +F+GP VGK ++ AL+E + M+ + E+ V R
Sbjct: 597 PSGS-----FMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAP 650
Query: 714 -GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLG 769
G ++ G EAV+R P+SVILL+++++A V + + +E GRL DS+GR +
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFR 710
Query: 770 NVIFILTAD 778
N + ++T++
Sbjct: 711 NTVIVMTSN 719
>gi|199598008|ref|ZP_03211432.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus rhamnosus HN001]
gi|199591098|gb|EDY99180.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus rhamnosus HN001]
Length = 699
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 389 LKNLASDLEQHVIGQNEAVDKVARAIRRNRIGFNKTGRPIGS-----FLFVGPTGVGKTE 443
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 444 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 503
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 504 ILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 549
>gi|111023664|ref|YP_706636.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus jostii
RHA1]
gi|110823194|gb|ABG98478.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus jostii
RHA1]
Length = 789
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 28/204 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L E + ++L K L + L E+V Q EA VA V + + G RR
Sbjct: 557 PVARLQEGEREKLLK---------LDEILHERVVGQDEAVQLVADAVIRARSGIRDPRRP 607
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A L+ + + M+ L +++E R
Sbjct: 608 IGS-----FIFLGPTGVGKTELAKTLASALFDSEDNMVRL-DMSEYQERHTVSRLIGAPP 661
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+L ++I++A V + + ++ GR+ DS GR++ N
Sbjct: 662 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRN 721
Query: 771 VIFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 722 TVIIMTSNI---GSQHLLEGVTAD 742
>gi|81428651|ref|YP_395651.1| chaperone ClpB [Lactobacillus sakei subsp. sakei 23K]
gi|78610293|emb|CAI55342.1| Chaperone ClpB [Lactobacillus sakei subsp. sakei 23K]
Length = 864
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D +L L E+V Q +A AV V + + G R GS LF+GP V
Sbjct: 556 DRQKLLQLADHLHERVIGQDQAVDAVTDAVLRARAGLQDPNRPLGS-----FLFLGPTGV 610
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 611 GKTELAKALAEDLFDSERHMVRIDMSEYMEKYSVSRLVGAAPGYVGYEEGGQLTEAVRRN 670
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++++LL++I++A V + + ++ GRL DS GR I N I I+T++
Sbjct: 671 PYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTIDFKNTIIIMTSN 720
>gi|318059835|ref|ZP_07978558.1| chaperone [Streptomyces sp. SA3_actG]
Length = 845
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRG 659
P +L E + +L K L ++L +V Q+EA +AVA V + + G G R
Sbjct: 521 PVAQLTEDEKQKLMK---------LEEALHSRVVGQEEAVTAVAQAVRRNRAGMGDPDRP 571
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+EL+ G M+ E+ V
Sbjct: 572 VGS-----FLFLGPTGVGKTELAKALAELLFGDENRMVRFDMSEFQEKHTVSRLVGAPPG 626
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R+P+SV+L +++++A V + + ++ GRL D+ GR + +
Sbjct: 627 YVGHEEAGQLTEKVRRSPYSVLLFDEVEKAHPDVFNTLLQVLDDGRLTDAQGRTVDFRHT 686
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 687 VVIMTSN 693
>gi|258510801|ref|YP_003184235.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257477527|gb|ACV57846.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 676
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKM 681
K L L V Q EA VA + + ++G RRG G LF+GP VGK +M
Sbjct: 371 LKNLEADLAAVVIGQDEAVRQVARAIRRSRVG--LRRGDRPIGS--FLFVGPTGVGKTEM 426
Query: 682 ASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVI 733
A L+E++ G+ MI L E+ V G ++ E V+R+P+S+I
Sbjct: 427 ARRLAEILFGSKDAMIRLDMSEYMEKHSVSKLIGAPPGYVGYEQAGQLTEQVRRHPYSLI 486
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
L+++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 487 LVDEIEKAHPDVQHIFLQIMEDGRLTDSQGRTVSFKDTLIIMTSN 531
>gi|89893184|ref|YP_516671.1| hypothetical protein DSY0438 [Desulfitobacterium hafniense Y51]
gi|219666457|ref|YP_002456892.1| ATPase AAA [Desulfitobacterium hafniense DCB-2]
gi|423073164|ref|ZP_17061907.1| negative regulator of genetic competence ClpC/MecB
[Desulfitobacterium hafniense DP7]
gi|89332632|dbj|BAE82227.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536717|gb|ACL18456.1| ATPase AAA-2 domain protein [Desulfitobacterium hafniense DCB-2]
gi|361855994|gb|EHL07928.1| negative regulator of genetic competence ClpC/MecB
[Desulfitobacterium hafniense DP7]
Length = 826
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 92/176 (52%), Gaps = 17/176 (9%)
Query: 615 KPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLF 670
K L + +RLL ++L ++V Q++A AV+ V + + G +R GS +F
Sbjct: 497 KKLAQEESERLLGLEETLHQRVVGQEDAVKAVSRAVRRARAGLKDPKRPVGS-----FIF 551
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIG 722
+GP VGK ++A AL+E + G +I + E+ V G ++
Sbjct: 552 LGPTGVGKTELARALAEALFGEEDALIRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLT 611
Query: 723 EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
EA++R P+SVILL++I++A V + + +E GRL D+ GR + N + I+T++
Sbjct: 612 EAIRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNAVIIMTSN 667
>gi|291546937|emb|CBL20045.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
sp. SR1/5]
Length = 821
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 20/179 (11%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L K L ++V Q EA SAVA V + ++G R GS LF+GP VGK +++
Sbjct: 510 LEKVLKKRVIGQDEAVSAVARAVKRGRVGLKDPARPIGS-----FLFLGPTGVGKTELSK 564
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
AL+E V G+ MI + E+ V G ++ E V+RNP+SVIL
Sbjct: 565 ALAEAVFGSEQAMIRVDMSEYMEKHSVSKMIGSPPGYVGYEEGGQLSEKVRRNPYSVILF 624
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD------WLPDSLKFLS 788
++I++A V + + ++ G + D+ GR++ I I+T++ P L F+S
Sbjct: 625 DEIEKAHPDVFNILLQVLDDGHITDAQGRKVDFKQTIIIMTSNAGAQMIMEPKHLGFMS 683
>gi|229491315|ref|ZP_04385140.1| ATP-dependent chaperone protein ClpB [Rhodococcus erythropolis
SK121]
gi|229321772|gb|EEN87568.1| ATP-dependent chaperone protein ClpB [Rhodococcus erythropolis
SK121]
Length = 877
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 28/204 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L E + ++L K L + L E+V Q EA VA V + + G RR
Sbjct: 557 PVARLQEGEREKLLK---------LDEILHERVVGQDEAVQLVADAVIRARSGIRDPRRP 607
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A L+ + + M+ L +++E R
Sbjct: 608 IGS-----FIFLGPTGVGKTELAKTLASALFDSEDNMVRL-DMSEYQERHTVSRLIGAPP 661
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+L ++I++A V + + ++ GR+ DS GR++ N
Sbjct: 662 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRN 721
Query: 771 VIFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 722 TVIIMTSNI---GSQHLLEGVTAD 742
>gi|197303865|ref|ZP_03168900.1| hypothetical protein RUMLAC_02603 [Ruminococcus lactaris ATCC
29176]
gi|197297048|gb|EDY31613.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus lactaris ATCC 29176]
Length = 812
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +KL ES D + K L K L ++V Q EA SAVA V + ++G +R
Sbjct: 489 PVSKLTES---------DTERLKNLEKILQKRVIGQDEAVSAVARAVKRGRVGLKDPKRP 539
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ AL+E + G MI + E+ V
Sbjct: 540 IGS-----FLFLGPTGVGKTELSKALAEALFGKEEAMIRVDMSEYMEKHSVSKMIGSPPG 594
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ + V+ +P+SV+L ++I++A V + + ++ G + DS GR++ N
Sbjct: 595 YVGHEEGGQLSDQVRTHPYSVLLFDEIEKAHPDVFNVLLQVLDDGHITDSQGRKVDFSNT 654
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 655 VIIMTSN 661
>gi|397737187|ref|ZP_10503860.1| ATP-dependent chaperone ClpB [Rhodococcus sp. JVH1]
gi|396926917|gb|EJI94153.1| ATP-dependent chaperone ClpB [Rhodococcus sp. JVH1]
Length = 877
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 28/204 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L E + ++L K L + L E+V Q EA VA V + + G RR
Sbjct: 557 PVARLQEGEREKLLK---------LDEILHERVVGQDEAVQLVADAVIRARSGIRDPRRP 607
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A L+ + + M+ L +++E R
Sbjct: 608 IGS-----FIFLGPTGVGKTELAKTLASALFDSEDNMVRL-DMSEYQERHTVSRLIGAPP 661
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+L ++I++A V + + ++ GR+ DS GR++ N
Sbjct: 662 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRN 721
Query: 771 VIFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 722 TVIIMTSNI---GSQHLLEGVTAD 742
>gi|423689870|ref|ZP_17664390.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
SS101]
gi|388002306|gb|EIK63635.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
SS101]
Length = 854
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 27/189 (14%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRR 658
P +K+ E + D+L K ++SL+ ++V Q+EA AV+ V + + G + R
Sbjct: 547 PVSKMLEGERDKLLK----------MESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNR 596
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR----- 713
+GS +F+GP VGK ++ AL+E + M+ + E+ V R
Sbjct: 597 PSGS-----FMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAP 650
Query: 714 -GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLG 769
G ++ G EAV+R P+SVILL+++++A V + + +E GRL DS+GR +
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFR 710
Query: 770 NVIFILTAD 778
N + ++T++
Sbjct: 711 NTVIVMTSN 719
>gi|377831831|ref|ZP_09814797.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
mucosae LM1]
gi|377554322|gb|EHT16035.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
mucosae LM1]
Length = 735
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 45/210 (21%)
Query: 582 EKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAAS 641
EKTHI PV D + +NKL + L K L + V Q EA
Sbjct: 395 EKTHI-PVGDL-----QKQEENKLRD-----------------LDKQLEKHVIGQNEAVD 431
Query: 642 AVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLG 700
VA + + ++G N R GS LF+GP VGK +MA L++L+ G+ MI
Sbjct: 432 KVARAIRRNRIGLNKSGRPIGS-----FLFVGPTGVGKTEMAKQLAKLLFGSKDAMI--- 483
Query: 701 PRRDHEEPEVRVR---------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGN 748
R D E + G ++ G E V+R+P+S+ILL+++++A V
Sbjct: 484 -RFDMSEYMDKTSTSKLIGAAPGYVGYEEAGQLTEQVRRHPYSLILLDEVEKAHPDVMHM 542
Query: 749 IKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ ++ GRL DS GR +S + I I+T++
Sbjct: 543 FLQILDDGRLTDSQGRTVSFKDTIIIMTSN 572
>gi|297789027|ref|XP_002862527.1| hypothetical protein ARALYDRAFT_920586 [Arabidopsis lyrata subsp.
lyrata]
gi|297308102|gb|EFH38785.1| hypothetical protein ARALYDRAFT_920586 [Arabidopsis lyrata subsp.
lyrata]
Length = 393
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 636 QQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASP 694
Q EA AVA + + ++G G+ ++ +GS LF+GP VGK ++A AL+E +
Sbjct: 78 QDEAVKAVAAAILRSRVGLGRPQQPSGS-----FLFLGPTGVGKTELAKALAEQLFYDEN 132
Query: 695 IMIPLGPRRDHEEPEVRVRGKTALDKIG-------EAVKRNPFSVILLEDIDEADMVVRG 747
+++ L + V IG E V+R P+ V+L +++++A++ V
Sbjct: 133 LLVRLDMSEYIDRYTVSKLIGAPAGYIGHEGGQLTEPVRRRPYCVVLFDEVEKANVTVFN 192
Query: 748 NIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
+ + +E GRL DS+GR + N + I+T++ D L
Sbjct: 193 TLVQVLEDGRLTDSHGRTVDFKNTVIIMTSNLGADHL 229
>gi|441511212|ref|ZP_20993101.1| chaperone ClpB [Gordonia aichiensis NBRC 108223]
gi|441444682|dbj|GAC51062.1| chaperone ClpB [Gordonia aichiensis NBRC 108223]
Length = 876
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 28/204 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L E + ++L K L + L E+V Q EA VA V + + G RR
Sbjct: 557 PVARLQEGEREKLLK---------LDEILHERVIGQDEAVQLVADAVIRARSGIRDPRRP 607
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A L+ + + M+ L +++E R
Sbjct: 608 IGS-----FIFLGPTGVGKTELAKTLASALFDSEDNMVRL-DMSEYQERHTVSRLIGAPP 661
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+L ++I++A V + + ++ GR+ DS GR++ N
Sbjct: 662 GYIGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRN 721
Query: 771 VIFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 722 TVIIMTSNI---GSQHLLEGVTAD 742
>gi|260906427|ref|ZP_05914749.1| ATPase [Brevibacterium linens BL2]
Length = 850
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L +++ Q +A +++ + + + G +R +GS +F GP VGK ++A
Sbjct: 505 RMEDELHKRIIGQDDAVKSISRAIRRTRAGLKDPKRPSGS-----FIFAGPTGVGKTELA 559
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
ALSE + G +I L E+ V G ++ E V+R PFSV+L
Sbjct: 560 KALSEFLFGDEDSLISLDMSEYSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVL 619
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
+++++A + ++ + +E GRL DS GRE+ N I I+T +
Sbjct: 620 FDEVEKAHSDIFNSLLQILEDGRLTDSQGREVDFKNTIIIMTTNL 664
>gi|29376856|ref|NP_816010.1| ATP-dependent Clp protease, ATP-binding protein ClpB [Enterococcus
faecalis V583]
gi|227517049|ref|ZP_03947098.1| S14 family endopeptidase Clp [Enterococcus faecalis TX0104]
gi|227553894|ref|ZP_03983941.1| S14 family endopeptidase Clp [Enterococcus faecalis HH22]
gi|229549466|ref|ZP_04438191.1| S14 family endopeptidase Clp [Enterococcus faecalis ATCC 29200]
gi|255972169|ref|ZP_05422755.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T1]
gi|255975233|ref|ZP_05425819.1| AAA ATPase [Enterococcus faecalis T2]
gi|257084680|ref|ZP_05579041.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis Fly1]
gi|307285326|ref|ZP_07565470.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0860]
gi|312899787|ref|ZP_07759106.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0470]
gi|312953399|ref|ZP_07772239.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0102]
gi|422693157|ref|ZP_16751171.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0031]
gi|422714907|ref|ZP_16771631.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis
TX0309A]
gi|422717416|ref|ZP_16774101.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis
TX0309B]
gi|422726009|ref|ZP_16782466.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0312]
gi|422729592|ref|ZP_16785993.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0012]
gi|422736951|ref|ZP_16793208.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX2141]
gi|424678975|ref|ZP_18115811.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV103]
gi|424682105|ref|ZP_18118888.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV116]
gi|424684303|ref|ZP_18121023.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV129]
gi|424688226|ref|ZP_18124840.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV25]
gi|424691754|ref|ZP_18128271.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV31]
gi|424694514|ref|ZP_18130913.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV37]
gi|424695721|ref|ZP_18132098.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV41]
gi|424702154|ref|ZP_18138317.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV62]
gi|424703913|ref|ZP_18140034.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV63]
gi|424711917|ref|ZP_18144123.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV65]
gi|424717269|ref|ZP_18146565.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV68]
gi|424722338|ref|ZP_18151402.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV72]
gi|424726020|ref|ZP_18154707.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV73]
gi|424731263|ref|ZP_18159849.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV81]
gi|424746055|ref|ZP_18174308.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV85]
gi|424754961|ref|ZP_18182851.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV93]
gi|428767573|ref|YP_007153684.1| chaperone protein / clpB Protease [Enterococcus faecalis str.
Symbioflor 1]
gi|54035825|sp|Q831Y7.1|CLPB_ENTFA RecName: Full=Chaperone protein ClpB
gi|29344321|gb|AAO82080.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Enterococcus
faecalis V583]
gi|227075496|gb|EEI13459.1| S14 family endopeptidase Clp [Enterococcus faecalis TX0104]
gi|227176978|gb|EEI57950.1| S14 family endopeptidase Clp [Enterococcus faecalis HH22]
gi|229305381|gb|EEN71377.1| S14 family endopeptidase Clp [Enterococcus faecalis ATCC 29200]
gi|255963187|gb|EET95663.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T1]
gi|255968105|gb|EET98727.1| AAA ATPase [Enterococcus faecalis T2]
gi|256992710|gb|EEU80012.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis Fly1]
gi|306502903|gb|EFM72165.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0860]
gi|310628608|gb|EFQ11891.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0102]
gi|311293037|gb|EFQ71593.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0470]
gi|315146032|gb|EFT90048.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX2141]
gi|315150193|gb|EFT94209.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0012]
gi|315152067|gb|EFT96083.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0031]
gi|315159129|gb|EFU03146.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0312]
gi|315574405|gb|EFU86596.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis
TX0309B]
gi|315580121|gb|EFU92312.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis
TX0309A]
gi|402349820|gb|EJU84740.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV116]
gi|402349840|gb|EJU84759.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV103]
gi|402361286|gb|EJU95854.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV31]
gi|402361495|gb|EJU96054.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV25]
gi|402361923|gb|EJU96465.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV129]
gi|402370031|gb|EJV04275.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV62]
gi|402370503|gb|EJV04707.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV37]
gi|402379362|gb|EJV13171.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV41]
gi|402382594|gb|EJV16252.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV65]
gi|402383470|gb|EJV17071.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV63]
gi|402385924|gb|EJV19445.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV68]
gi|402389152|gb|EJV22555.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV72]
gi|402390012|gb|EJV23383.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV73]
gi|402392894|gb|EJV26128.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV81]
gi|402397951|gb|EJV30937.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV85]
gi|402401636|gb|EJV34397.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis ERV93]
gi|427185746|emb|CCO72970.1| chaperone protein / clpB Protease [Enterococcus faecalis str.
Symbioflor 1]
Length = 868
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLMK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGIT 792
+ I+T++ + L +G+T
Sbjct: 716 VLIMTSNI---GSQLLLEGVT 733
>gi|240142554|ref|YP_002967067.1| protein disaggregation chaperone [Methylobacterium extorquens AM1]
gi|240012501|gb|ACS43726.1| protein disaggregation chaperone [Methylobacterium extorquens AM1]
Length = 964
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
+ D +L L E+V Q+EA AVA V + G + RG + LF+GP VG
Sbjct: 606 EKDKLLKLEDKLHERVIGQEEAIRAVADAVRLARAGLREGRGPTA----TFLFLGPTGVG 661
Query: 678 KKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNP 729
K ++A L+E++ G +I + E V R+ G D+ G E V+R P
Sbjct: 662 KTELAKTLAEVIFGDQDAIIRIDMSEYGERHSVARLVGAPPGYVGYDEGGQLTEKVRRRP 721
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+SV+LL++I++A V + + + GRL D GR + N I I T++ D ++
Sbjct: 722 YSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQ 777
>gi|338536040|ref|YP_004669374.1| ClpB family protein [Myxococcus fulvus HW-1]
gi|337262136|gb|AEI68296.1| ClpB family protein [Myxococcus fulvus HW-1]
Length = 1123
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 579 SAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQE 638
S P T +E ++ F S P+ L + PLD + L + +V Q
Sbjct: 465 SRPVVTRLEAIRQF--ASESGIPEALLRDD------VPLDAAQVRAFLSA---RVLGQDA 513
Query: 639 AASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMI 697
A A+ V+ K G RR G LLF+GP VGK +++ AL+EL+ GA M+
Sbjct: 514 AVERAASVVSVLKAGLADVRRPLGV-----LLFVGPTGVGKTELSKALAELLFGAKERMV 568
Query: 698 PLGPRRDHEEPEVRVR----GKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAM 753
L ++ P+ +R G+T + AV+R PF V+LL+++++A V + +
Sbjct: 569 RLD-MGEYAGPDALLRLLGDGETP-GHLSSAVRRQPFCVVLLDEVEKAHPAVHDALLGVL 626
Query: 754 ERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
GRL D+ GR N + ILT++ D+L+
Sbjct: 627 GEGRLTDASGRFTDFRNALIILTSNLGADTLR 658
>gi|411117307|ref|ZP_11389794.1| ATPase with chaperone activity, ATP-binding subunit
[Oscillatoriales cyanobacterium JSC-12]
gi|410713410|gb|EKQ70911.1| ATPase with chaperone activity, ATP-binding subunit
[Oscillatoriales cyanobacterium JSC-12]
Length = 822
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 125/264 (47%), Gaps = 36/264 (13%)
Query: 533 QLNRNLGDTLQLNSNMVSSQPAERAVS------PLNSPVRTDLVLGRSKVLESAPEKTHI 586
+L++ L L+ + V SQ +RA + + + +R + ++K ES+ ++T +
Sbjct: 414 ELDKELRQVLKEKDDAVRSQNFDRAGALRDREMEIKAEIRA---IAQNKKTESSSDETPV 470
Query: 587 EPVKDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVA 644
+D ++S P NKL ES++++L D +L +++ Q EA AV+
Sbjct: 471 VTEEDIAQIVASWTGVPVNKLTESESEKLLHMED---------TLHQRLIGQDEAVRAVS 521
Query: 645 TTVTQCKLG--NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPR 702
+ + ++G N R A +F GP VGK ++ AL+ G+ MI L
Sbjct: 522 RAIRRARVGLKNPNRPIAS------FIFSGPTGVGKTELTKALASYFFGSEEAMIRLDMS 575
Query: 703 RDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAME 754
E V G ++ EAV+R P++V+L ++I++A V + + +E
Sbjct: 576 EYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILE 635
Query: 755 RGRLVDSYGREISLGNVIFILTAD 778
GRL D+ GR + N + I+T++
Sbjct: 636 DGRLTDAKGRTVDFKNTLLIMTSN 659
>gi|366086043|ref|ZP_09452528.1| ATP-dependent chaperone ClpB [Lactobacillus zeae KCTC 3804]
Length = 868
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 17/186 (9%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L +L ++V Q EA +AV+ V + + G R GS LF+GP V
Sbjct: 557 DRQKLLHLADNLHKRVIGQNEAVTAVSDAVLRSRAGLQDPSRPLGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 612 GKTELAKALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEQGGQLTEAVRRN 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLS 788
P++++LL++I++A+ V + + ++ GRL D GR + N I I+T++ ++L
Sbjct: 672 PYTIVLLDEIEKANPDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSNL---GSEYLL 728
Query: 789 QGITLD 794
G+ D
Sbjct: 729 DGVQAD 734
>gi|269217199|ref|ZP_06161053.1| negative regulator of genetic competence ClpC/MecB [Slackia exigua
ATCC 700122]
gi|269129336|gb|EEZ60421.1| negative regulator of genetic competence ClpC/MecB [Slackia exigua
ATCC 700122]
Length = 874
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 617 LDPDSFKRLLKS---LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
L D K+LL+ L E++ Q+EA +A++ + + + G RR AGS +F+G
Sbjct: 514 LTEDEAKKLLRMEGVLHERIIGQEEAVTALSKAIRRSRSGLKDPRRPAGS-----FIFLG 568
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIGE---A 724
P VGK +++ AL+E + + +I E+ V R+ G D+ G+ A
Sbjct: 569 PSGVGKTELSKALAEFLFSSEEALISFDMSEYMEKHTVSRLIGSPPGYVGFDEGGQLTKA 628
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V+++P+SV+L ++I++A V + + +E GRL D+ GR + N + I+T++
Sbjct: 629 VRQHPYSVVLFDEIEKAHPDVFNILLQILEEGRLTDAQGRTVDFRNAVIIMTSN 682
>gi|4336198|gb|AAD17691.1| ATP-dependent protease ClpE [Listeria monocytogenes]
Length = 728
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L ++L KV Q++A VA + + ++G K R GS LF+GP VGK +
Sbjct: 423 MKNLERNLTGKVIGQEDAVKKVAKAIRRSRVGLKSKNRPIGS-----FLFVGPTGVGKTE 477
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G S I L E+ + G ++ E V+RNP+S+
Sbjct: 478 LGRTLARELFGTSEAWIRLDMSEFMEKHSISKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 537
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V+ + +E GRL DS GR S + + I+T++
Sbjct: 538 ILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTASFKDTVIIMTSN 583
>gi|406909140|gb|EKD49459.1| hypothetical protein ACD_63C00138G0006, partial [uncultured
bacterium]
Length = 870
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 32/267 (11%)
Query: 561 LNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPD 620
L+ R D G+ VL S EK + D+ G P ++L + + D+L K
Sbjct: 505 LDGSWRKDKATGQPTVLASDIEKL----ISDWTGI-----PVSELAQEEVDKLLK----- 550
Query: 621 SFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKK 679
L + L +V Q EA AVA V + + G R GS +F+GP VGK
Sbjct: 551 ----LEERLHARVIGQNEAVQAVAEAVRRGRAGLKDPNRPIGS-----FIFLGPTGVGKT 601
Query: 680 KMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFS 731
++A AL+E V G +I + E+ V G ++ E V+R P+S
Sbjct: 602 ELARALAEQVFGNEDTIIRVDMSEYMEQHSVAKLTGSPPGYVGYEEGGQLTEKVRRKPYS 661
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGI 791
VILL++I++A V + + ++ GRL D+ GR + N I I T++ ++ +++G
Sbjct: 662 VILLDEIEKAHPDVFNILLQILDDGRLTDAKGRAVDFKNTIIIATSNIGSQRIQEVTEGR 721
Query: 792 TLDEKKLTSLASGEWQLRLSIRGKTTK 818
+ K+ + + +LR+ + G+ K
Sbjct: 722 IGFDDKVKERKADKDELRVELMGELKK 748
>gi|392989406|ref|YP_006487999.1| ATP-dependent Clp protease, ATP-binding protein ClpB [Enterococcus
hirae ATCC 9790]
gi|392336826|gb|AFM71108.1| ATP-dependent Clp protease, ATP-binding protein ClpB [Enterococcus
hirae ATCC 9790]
Length = 870
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 29/223 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLIK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRG 814
+ I+T++ + L +G++ D T E Q+R +RG
Sbjct: 716 VLIMTSNI---GSQLLLEGVSADG---TIPEEVEEQVRTILRG 752
>gi|388469396|ref|ZP_10143605.1| ATP-dependent chaperone protein ClpB [Pseudomonas synxantha BG33R]
gi|388006093|gb|EIK67359.1| ATP-dependent chaperone protein ClpB [Pseudomonas synxantha BG33R]
Length = 854
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 27/189 (14%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRR 658
P +K+ E + D+L K ++SL+ ++V Q+EA AV+ V + + G + R
Sbjct: 547 PVSKMLEGERDKLLK----------MESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNR 596
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR----- 713
+GS +F+GP VGK ++ AL+E + M+ + E+ V R
Sbjct: 597 PSGS-----FMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAP 650
Query: 714 -GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLG 769
G ++ G EAV+R P+SVILL+++++A V + + +E GRL DS+GR +
Sbjct: 651 PGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFR 710
Query: 770 NVIFILTAD 778
N + ++T++
Sbjct: 711 NTVIVMTSN 719
>gi|339640013|ref|ZP_08661457.1| chaperone protein ClpB [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339453282|gb|EGP65897.1| chaperone protein ClpB [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 812
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 45/259 (17%)
Query: 556 RAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQK 615
R + N PV TDL++ + +LE+ L +S P Q KL ++
Sbjct: 459 RLIKEENQPVLTDLIVDEADILET-------------LSRLSGIPVQ-KLTQT------- 497
Query: 616 PLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPD 674
D + L K L ++V Q EA SA++ + + + G +R GS +F+GP
Sbjct: 498 --DAKKYLHLEKELHQRVIGQDEAISAISRAIRRNQSGIRSHKRPIGS-----FMFLGPT 550
Query: 675 RVGKKKMASALSELVSG---------ASPIMIPLGPRRDHEEPEVRVRGKTALDKIGEAV 725
VGK ++A AL+E + S M R + P V G ++ E V
Sbjct: 551 GVGKTELAKALAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYV-GYEEGGELTEKV 609
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+ P+SV+L +++++A + + + ++ G L DS GR+I N I I+T++ SL+
Sbjct: 610 RNRPYSVLLFDEVEKAHPDIFNILLQVLDDGVLTDSKGRKIDFSNTIIIMTSNLGATSLR 669
Query: 786 ------FLSQGITLDEKKL 798
F ++ I LD++ +
Sbjct: 670 DDKTVGFGARDIRLDQENM 688
>gi|257421994|ref|ZP_05598984.1| chaperone clpB [Enterococcus faecalis X98]
gi|257163818|gb|EEU93778.1| chaperone clpB [Enterococcus faecalis X98]
Length = 868
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLMK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGIT 792
+ I+T++ + L +G+T
Sbjct: 716 VLIMTSNI---GSQLLLEGVT 733
>gi|333028899|ref|ZP_08456963.1| putative Clp protease ATP binding subunit [Streptomyces sp. Tu6071]
gi|332748751|gb|EGJ79192.1| putative Clp protease ATP binding subunit [Streptomyces sp. Tu6071]
Length = 869
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
L + L +V Q EA +AVA V + + G G + LF+GP VGK ++A
Sbjct: 549 LEEHLHARVIGQDEAVTAVADAVLRSRAG----LSTGDRPIGSFLFLGPTGVGKTELART 604
Query: 685 LSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLE 736
L+E + G+ M+ L E V G ++ EAV+RNP+S++LL+
Sbjct: 605 LAEALFGSEDRMVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEAVRRNPYSLLLLD 664
Query: 737 DIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+I++A V + + ++ GRL D+ GR ++ N + ++T++
Sbjct: 665 EIEKAHPDVFNILLQVLDDGRLTDAQGRTVNFTNTVIVMTSN 706
>gi|302517422|ref|ZP_07269764.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
gi|302426317|gb|EFK98132.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
Length = 866
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
L + L +V Q EA +AVA V + + G G + LF+GP VGK ++A
Sbjct: 546 LEEHLHARVIGQDEAVTAVADAVLRSRAG----LSTGDRPIGSFLFLGPTGVGKTELART 601
Query: 685 LSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLE 736
L+E + G+ M+ L E V G ++ EAV+RNP+S++LL+
Sbjct: 602 LAEALFGSEDRMVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEAVRRNPYSLLLLD 661
Query: 737 DIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+I++A V + + ++ GRL D+ GR ++ N + ++T++
Sbjct: 662 EIEKAHPDVFNILLQVLDDGRLTDAQGRTVNFTNTVIVMTSN 703
>gi|145226771|gb|ABP48137.1| putative ATP-dependent Clp protease [Rhodococcus sp. DK17]
Length = 877
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 28/204 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L E + ++L K L + L E+V Q EA VA V + + G RR
Sbjct: 557 PVARLQEGEREKLLK---------LDEILHERVVGQDEAVQLVADAVIRARSGIRDPRRP 607
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A L+ + + M+ L +++E R
Sbjct: 608 IGS-----FIFLGPTGVGKTELAKTLASALFDSEDNMVRL-DMSEYQERHTVSRLIGAPP 661
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+L ++I++A V + + ++ GR+ DS GR++ N
Sbjct: 662 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRN 721
Query: 771 VIFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 722 TVIIMTSNI---GSQHLLEGVTAD 742
>gi|385828477|ref|YP_005866249.1| Clp protease ATP-binding subunit [Lactobacillus rhamnosus GG]
gi|259650122|dbj|BAI42284.1| Clp protease ATP-binding subunit [Lactobacillus rhamnosus GG]
Length = 697
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 387 LKNLASDLEQHVIGQNEAVDKVARAIRRNRIGFNKTGRPIGS-----FLFVGPTGVGKTE 441
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 442 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 501
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 502 ILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 547
>gi|116493171|ref|YP_804906.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus pentosaceus ATCC 25745]
gi|116103321|gb|ABJ68464.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus pentosaceus ATCC 25745]
Length = 821
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 38/224 (16%)
Query: 575 KVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVW 634
K++E+ + I V D+ G P ++ +S++D+L L K+L E+V
Sbjct: 475 KLIENGEDIAQI--VSDWTGV-----PLTQMKQSESDRLIN---------LEKTLHERVI 518
Query: 635 WQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGAS 693
Q+EA S+VA + + + G +R GS +F+GP VGK ++A +L++++ G+
Sbjct: 519 GQKEAVSSVARAIRRARSGLKSPKRPIGS-----FMFLGPTGVGKTELAKSLADIMFGSE 573
Query: 694 PIMIPLGPRRDHEEPEVRVR---------GKTALDKIG---EAVKRNPFSVILLEDIDEA 741
MI R D E R G D+ G E V+R P+SV+L +++++A
Sbjct: 574 DNMI----RIDMSEYMERYSTSRLVGSAPGYVGYDEGGQLTEQVRRKPYSVVLFDEVEKA 629
Query: 742 DMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
V + + + G L DS GR + N I I+T++ +L+
Sbjct: 630 HPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNLGATALR 673
>gi|318058570|ref|ZP_07977293.1| Clp protease ATP binding subunit [Streptomyces sp. SA3_actG]
gi|318079359|ref|ZP_07986691.1| Clp protease ATP binding subunit [Streptomyces sp. SA3_actF]
Length = 862
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
L + L +V Q EA +AVA V + + G G + LF+GP VGK ++A
Sbjct: 542 LEEHLHARVIGQDEAVTAVADAVLRSRAG----LSTGDRPIGSFLFLGPTGVGKTELART 597
Query: 685 LSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLE 736
L+E + G+ M+ L E V G ++ EAV+RNP+S++LL+
Sbjct: 598 LAEALFGSEDRMVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEAVRRNPYSLLLLD 657
Query: 737 DIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+I++A V + + ++ GRL D+ GR ++ N + ++T++
Sbjct: 658 EIEKAHPDVFNILLQVLDDGRLTDAQGRTVNFTNTVIVMTSN 699
>gi|262204257|ref|YP_003275465.1| ATP-dependent chaperone ClpB [Gordonia bronchialis DSM 43247]
gi|262087604|gb|ACY23572.1| ATP-dependent chaperone ClpB [Gordonia bronchialis DSM 43247]
Length = 876
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 28/204 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L E + ++L K L + L E+V Q EA VA V + + G RR
Sbjct: 557 PVARLQEGEREKLLK---------LDEILHERVVGQDEAVQLVADAVIRARSGIRDPRRP 607
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A L+ + + M+ L +++E R
Sbjct: 608 IGS-----FIFLGPTGVGKTELAKTLASALFDSEDNMVRL-DMSEYQERHTVSRLIGAPP 661
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+L ++I++A V + + ++ GR+ DS GR++ N
Sbjct: 662 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRN 721
Query: 771 VIFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L +G+T D
Sbjct: 722 TVIIMTSNI---GSQHLLEGVTAD 742
>gi|406590647|ref|ZP_11065007.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD1E]
gi|404469075|gb|EKA13913.1| ATP-dependent chaperone protein ClpB [Enterococcus sp. GMD1E]
Length = 869
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 17/180 (9%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
+L ++L ++V Q EA AV+ V + + G R GS LF+GP VGK ++A
Sbjct: 564 KLNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRPLGS-----FLFLGPTGVGKTELA 618
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
AL+E + + M+ + E+ V G ++ EAV+RNP++++L
Sbjct: 619 KALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEAVRRNPYTIVL 678
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLD 794
L++I++A V + + ++ GRL DS GR + N + I+T++ + L +G+T D
Sbjct: 679 LDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNTVLIMTSNI---GSQLLLEGVTAD 735
>gi|398848122|ref|ZP_10604958.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM84]
gi|398249906|gb|EJN35274.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM84]
Length = 854
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 32/233 (13%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +T+ L R+KV E+ E V + G P K+ E + ++L
Sbjct: 510 ERSLQMVDQHGKTENQLLRNKV----TEEEIAEVVSKWTGI-----PVAKMLEGEREKLL 560
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K D L ++V Q EA +AVA V + + G + R +GS LF+GP
Sbjct: 561 KMED---------LLHQRVIGQNEAVTAVANAVRRSRAGLSDPNRPSGS-----FLFLGP 606
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAV 725
VGK ++ AL+E + M+ + E+ V R+ G ++ G EAV
Sbjct: 607 TGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAV 666
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SV+LL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 667 RRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
>gi|404372678|ref|ZP_10977973.1| hypothetical protein CSBG_00014 [Clostridium sp. 7_2_43FAA]
gi|404301168|gb|EEH96388.2| hypothetical protein CSBG_00014 [Clostridium sp. 7_2_43FAA]
Length = 812
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++++L + D L ++V Q+EA AV+ V + ++G R
Sbjct: 490 PLEKLTEQESEKLLQLEDI---------LHKRVIGQKEAVMAVSKAVRRARVGLKDPNRP 540
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
G+ +F GP VGK ++++AL+E + G +I + E+ V
Sbjct: 541 IGT-----FIFCGPTGVGKTELSNALAEAMFGDKKNLIRIDMSEYMEKHSVARLIGAPPG 595
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP+SVILL++I++A V + + ME GRL DS G+ I+ N
Sbjct: 596 YIGHDEGGQLTEAVRRNPYSVILLDEIEKAHPDVFNILLQIMEDGRLTDSKGKIINFKNT 655
Query: 772 IFILTAD 778
I I+T++
Sbjct: 656 IVIMTSN 662
>gi|418070982|ref|ZP_12708257.1| ATP-dependent clp protease ATP-binding subunit [Lactobacillus
rhamnosus R0011]
gi|357540402|gb|EHJ24419.1| ATP-dependent clp protease ATP-binding subunit [Lactobacillus
rhamnosus R0011]
Length = 699
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 389 LKNLASDLEQHVIGQNEAVDKVARAIRRNRIGFNKTGRPIGS-----FLFVGPTGVGKTE 443
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 444 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 503
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 504 ILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 549
>gi|154249061|ref|YP_001409886.1| ATPase [Fervidobacterium nodosum Rt17-B1]
gi|154152997|gb|ABS60229.1| ATPase AAA-2 domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 822
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E++ ++L K L ++L E+V Q EA +A++ + + + G RR
Sbjct: 494 PLQKLEETEREKLLK---------LEEALHERVVGQDEAINAISRAIRRARSGLKDPRRP 544
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
G LF+GP VGK ++A AL+E + G +I E+ V
Sbjct: 545 VG-----VFLFLGPTGVGKTELAKALAEYLFGDEKALIRFDMSEYMEKFSVSRLIGAPPG 599
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G + E V+R PFSVIL ++I++A V + + M+ GRL DS G + N
Sbjct: 600 YVGYEEGGTLTEKVRRRPFSVILFDEIEKAHPDVFNLLLQIMDDGRLTDSQGHVVDFRNT 659
Query: 772 IFILTAD 778
I I+T++
Sbjct: 660 IIIMTSN 666
>gi|229552620|ref|ZP_04441345.1| ATP-binding subunit of chaperone protein [Lactobacillus rhamnosus
LMS2-1]
gi|229314012|gb|EEN79985.1| ATP-binding subunit of chaperone protein [Lactobacillus rhamnosus
LMS2-1]
Length = 754
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 444 LKNLASDLEQHVIGQNEAVDKVARAIRRNRIGFNKTGRPIGS-----FLFVGPTGVGKTE 498
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 499 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 558
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + + GRL DS GR +S + I I+T++
Sbjct: 559 ILLDEIEKAHPDVMNMFLQILNDGRLTDSQGRTVSFKDTIIIMTSN 604
>gi|227818348|ref|YP_002822319.1| ATPase AAA [Sinorhizobium fredii NGR234]
gi|227337347|gb|ACP21566.1| carboxy-terminus of ATPase with conserved AAA-2 domain
[Sinorhizobium fredii NGR234]
Length = 595
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
R+ + L E+V Q+EA AV+ V + G + G K LF+GP VGK ++A
Sbjct: 258 RMEEKLHERVIGQEEAIKAVSDAVRLARAGLRE----GRKPVATFLFLGPTGVGKTELAK 313
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
AL+E+V G M+ L E V G ++ E V+R P++V+LL
Sbjct: 314 ALAEIVYGDEDAMVRLDMSEYMERHTVARLVGAPPGYVGYEEGGQLTERVRRRPYTVVLL 373
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
++I++A V + + + GRL D GR + N I I T++ D ++
Sbjct: 374 DEIEKAHPDVYNVLLQVFDDGRLTDGKGRMVDFTNTIIIATSNLGSDIIQ 423
>gi|258508362|ref|YP_003171113.1| ATP-dependent chaperone ClpB [Lactobacillus rhamnosus GG]
gi|385828031|ref|YP_005865803.1| Clp protease [Lactobacillus rhamnosus GG]
gi|257148289|emb|CAR87262.1| ATP-dependent chaperone ClpB [Lactobacillus rhamnosus GG]
gi|259649676|dbj|BAI41838.1| Clp protease [Lactobacillus rhamnosus GG]
Length = 868
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L +L ++V Q EA +AV+ V + + G R GS LF+GP V
Sbjct: 557 DRQKLLHLADNLHQRVIGQDEAVTAVSDAVLRSRAGLQDPSRPLGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 612 GKTELAKALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEQGGQLTEAVRRN 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++++LL++I++A+ V + + ++ GRL D GR + N I I+T++
Sbjct: 672 PYTIVLLDEIEKANPDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSN 721
>gi|256617182|ref|ZP_05474028.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Enterococcus
faecalis ATCC 4200]
gi|256596709|gb|EEU15885.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Enterococcus
faecalis ATCC 4200]
Length = 868
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLMK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YIGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGIT 792
+ I+T++ + L +G+T
Sbjct: 716 VLIMTSNI---GSQLLLEGVT 733
>gi|402829159|ref|ZP_10878040.1| Clp amino terminal domain protein [Slackia sp. CM382]
gi|402284913|gb|EJU33406.1| Clp amino terminal domain protein [Slackia sp. CM382]
Length = 865
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 617 LDPDSFKRLLKS---LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
L D K+LL+ L E++ Q+EA +A++ + + + G RR AGS +F+G
Sbjct: 505 LTEDEAKKLLRMEGVLHERIIGQEEAVTALSKAIRRSRSGLKDPRRPAGS-----FIFLG 559
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIGE---A 724
P VGK +++ AL+E + + +I E+ V R+ G D+ G+ A
Sbjct: 560 PSGVGKTELSKALAEFLFSSEEALISFDMSEYMEKHTVSRLIGSPPGYVGFDEGGQLTKA 619
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V+++P+SV+L ++I++A V + + +E GRL D+ GR + N + I+T++
Sbjct: 620 VRQHPYSVVLFDEIEKAHPDVFNILLQILEEGRLTDAQGRTVDFRNAVIIMTSN 673
>gi|300864313|ref|ZP_07109191.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
gi|300337702|emb|CBN54337.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
Length = 904
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 23/193 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ +L + L K L ++V Q EA AV+ + + + G R
Sbjct: 575 PVNRLLESERQKLLQ---------LEKHLHQRVIGQHEAVEAVSAAIRRARAGMKDPGRP 625
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LFMGP VGK ++A AL+E + ++ + E+ V G
Sbjct: 626 IGS-----FLFMGPTGVGKTELARALAEFLFDTDDAIVRIDMSEYMEKHSVSRLVGAPPG 680
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R+P+SV+L +++++A V + + ++ GR+ DS GR + N
Sbjct: 681 YVGYDEGGQLSEAVRRHPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRVVDFRNT 740
Query: 772 IFILTADWLPDSL 784
+ ++T++ D +
Sbjct: 741 VIVMTSNIGSDYI 753
>gi|422706934|ref|ZP_16764631.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0043]
gi|315155649|gb|EFT99665.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0043]
Length = 886
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLMK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGIT 792
+ I+T++ + L +G+T
Sbjct: 716 VLIMTSNI---GSQLLLEGVT 733
>gi|297611270|ref|NP_001065796.2| Os11g0156800 [Oryza sativa Japonica Group]
gi|255679806|dbj|BAF27641.2| Os11g0156800, partial [Oryza sativa Japonica Group]
Length = 467
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 617 LDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-----RRGAGSKGDMWLLFM 671
L+ ++ K L +L +V +A+TV QC+ G K + + WLLF
Sbjct: 204 LNAENLKILCNALESRVPQHSNIVPDIASTVLQCRSGMKKMKLRHKEIIKASSTTWLLFQ 263
Query: 672 GPDRVGKKKMASALSELVSGASPIMIPLG------PRRDHEEPEVRVRGKTALD------ 719
G D GKK MA L++LV G+S + P D E+ ++ + + D
Sbjct: 264 GRDVDGKKAMAQELAKLVFGSSTEFSSISFDELTSPYSDSSSGELTLKRQRSADSNEHSF 323
Query: 720 --KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTA 777
++ E V +NP VI++ DI++ D +IK+A+ GR+ G E+ + I +L+
Sbjct: 324 AQRLCEIVSKNPHQVIVINDIEQLDQDSEISIKKAIANGRMRGCTGEEVDFEDAIIVLSY 383
Query: 778 D 778
+
Sbjct: 384 E 384
>gi|194014936|ref|ZP_03053553.1| negative regulator of genetic competence ClpC/mecB [Bacillus
pumilus ATCC 7061]
gi|194013962|gb|EDW23527.1| negative regulator of genetic competence ClpC/mecB [Bacillus
pumilus ATCC 7061]
Length = 661
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +V Q+ A VA V + + G K R GS LF+GP VGK +++ L+E
Sbjct: 368 LKARVIGQEHAVEKVAKAVKRSRAGLKSKHRPTGS-----FLFVGPTGVGKTELSKTLAE 422
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDID 739
+ G+ +I L E+ V G D+ G E V+R P+S+ILL++I+
Sbjct: 423 ELFGSRDAIIRLDMSEYMEKHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIE 482
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 483 KAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN 521
>gi|146297365|ref|YP_001181136.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410941|gb|ABP67945.1| ATPase AAA-2 domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 830
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 112/230 (48%), Gaps = 31/230 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E ++++L K L + L ++V Q EA AVA + + ++G +R
Sbjct: 494 PVNKLTEDESERLLK---------LEEVLHKRVVGQDEAVRAVARAIRRGRVGLKDPKRP 544
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++ AL+E + G +I + E+ V
Sbjct: 545 IGS-----FIFLGPTGVGKTELCRALAEALFGTEDALIRIDMSEYMEKFNVSKLIGSPPG 599
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R P+SV+L ++I++A V + + ++ GRL DS GR +S N
Sbjct: 600 YVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNT 659
Query: 772 IFILTADW---LPDSLKFLSQGITLDEKKLTSLASGEWQLRLSIRGKTTK 818
+ I+T++ L + K L + DEK+ T Q++ S+ G+ K
Sbjct: 660 VIIMTSNIGAQLITNPKKLGFSTSEDEKQRTY-----EQIKESVMGELKK 704
>gi|121999011|ref|YP_001003798.1| ATPase [Halorhodospira halophila SL1]
gi|121590416|gb|ABM62996.1| ATPase AAA-2 domain protein [Halorhodospira halophila SL1]
Length = 870
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 16/170 (9%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
D R+ ++L E+V Q EA AVA + + + G + R GS LF+GP VGK
Sbjct: 558 DKLLRMEEALHERVVGQDEAIGAVANAIRRSRAGLSDPNRPNGS-----FLFLGPTGVGK 612
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNP 729
++ AL+E + M+ + E+ V R G ++ G E V+R P
Sbjct: 613 TELCKALAEFLFDTQEAMVRIDMSEFMEKHSV-ARLIGAPPGYVGYEEGGYLTEHVRRKP 671
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
+SVILL+++++A V + + ++ GRL DS+GR + N + ++T++
Sbjct: 672 YSVILLDEVEKAHADVFNVLLQVLDDGRLTDSHGRTVDFRNTVIVMTSNL 721
>gi|427735123|ref|YP_007054667.1| ATP-dependent chaperone ClpB [Rivularia sp. PCC 7116]
gi|427370164|gb|AFY54120.1| ATP-dependent chaperone ClpB [Rivularia sp. PCC 7116]
Length = 888
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N L ES+ +L + D L ++V Q EA SAV+ + + + G +R
Sbjct: 556 PVNSLLESERQKLLQLED---------HLHQRVIGQDEAVSAVSAAIRRARAGMKDPQRP 606
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LFMGP VGK ++A AL++ + + M+ L E+ V
Sbjct: 607 IGS-----FLFMGPTGVGKTELARALAKFMFDSEDAMVRLDMSEYMEKHSVSRLVGAPPG 661
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P+SV+LL+++++A V + + ++ GR+ DS GR + N
Sbjct: 662 YVGFEEGGQLSEAVRRRPYSVVLLDEVEKAHADVFNILLQVLDDGRITDSQGRVVDFRNT 721
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 722 VIVMTSN 728
>gi|421768993|ref|ZP_16205702.1| ClpB protein [Lactobacillus rhamnosus LRHMDP2]
gi|421771256|ref|ZP_16207916.1| ClpB protein [Lactobacillus rhamnosus LRHMDP3]
gi|411185389|gb|EKS52517.1| ClpB protein [Lactobacillus rhamnosus LRHMDP2]
gi|411185842|gb|EKS52968.1| ClpB protein [Lactobacillus rhamnosus LRHMDP3]
Length = 868
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L +L ++V Q EA +AV+ V + + G R GS LF+GP V
Sbjct: 557 DRQKLLHLADNLHQRVIGQDEAVTAVSDAVLRSRAGLQDPSRPLGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 612 GKTELAKALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEQGGQLTEAVRRN 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++++LL++I++A+ V + + ++ GRL D GR + N I I+T++
Sbjct: 672 PYTIVLLDEIEKANPDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSN 721
>gi|229552157|ref|ZP_04440882.1| S14 family endopeptidase Clp [Lactobacillus rhamnosus LMS2-1]
gi|258539571|ref|YP_003174070.1| ATP-dependent chaperone ClpB [Lactobacillus rhamnosus Lc 705]
gi|385835221|ref|YP_005872995.1| ATP-dependent chaperone protein ClpB [Lactobacillus rhamnosus ATCC
8530]
gi|229314459|gb|EEN80432.1| S14 family endopeptidase Clp [Lactobacillus rhamnosus LMS2-1]
gi|257151247|emb|CAR90219.1| ATP-dependent chaperone ClpB [Lactobacillus rhamnosus Lc 705]
gi|355394712|gb|AER64142.1| ATP-dependent chaperone protein ClpB [Lactobacillus rhamnosus ATCC
8530]
Length = 868
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L +L ++V Q EA +AV+ V + + G R GS LF+GP V
Sbjct: 557 DRQKLLHLADNLHQRVIGQDEAVTAVSDAVLRSRAGLQDPSRPLGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 612 GKTELAKALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEQGGQLTEAVRRN 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++++LL++I++A+ V + + ++ GRL D GR + N I I+T++
Sbjct: 672 PYTIVLLDEIEKANPDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSN 721
>gi|256961339|ref|ZP_05565510.1| AAA ATPase [Enterococcus faecalis Merz96]
gi|293383626|ref|ZP_06629535.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis R712]
gi|293387262|ref|ZP_06631819.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis S613]
gi|312906175|ref|ZP_07765187.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis DAPTO
512]
gi|312909520|ref|ZP_07768375.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis DAPTO
516]
gi|256951835|gb|EEU68467.1| AAA ATPase [Enterococcus faecalis Merz96]
gi|291078962|gb|EFE16326.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis R712]
gi|291083299|gb|EFE20262.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis S613]
gi|310627821|gb|EFQ11104.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis DAPTO
512]
gi|311290193|gb|EFQ68749.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis DAPTO
516]
Length = 868
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLMK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGIT 792
+ I+T++ + L +G+T
Sbjct: 716 VLIMTSNI---GSQLLLEGVT 733
>gi|288574596|ref|ZP_06392953.1| ATPase AAA-2 domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570337|gb|EFC91894.1| ATPase AAA-2 domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 824
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 14/164 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ + ++ Q+ A SAV+ + + + G +R GS LF+GP VGK +MA
Sbjct: 505 RMEDEIHRRLVGQESAVSAVSKAIRRARSGLKDPKRPIGS-----FLFLGPTGVGKTEMA 559
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
+L++ + G+ ++ L E EV G + K+ E ++R P+SVIL
Sbjct: 560 RSLADFLFGSEDALVTLDMSEFMERHEVSKLIGAPPGYVGHESGGKLTETIRRRPYSVIL 619
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A+ V + + +E GRL D GR++ N + I+T++
Sbjct: 620 FDEIEKANPDVFNVLLQILEEGRLTDGQGRKVDFRNTVVIMTSN 663
>gi|333023515|ref|ZP_08451579.1| putative chaperone [Streptomyces sp. Tu6071]
gi|332743367|gb|EGJ73808.1| putative chaperone [Streptomyces sp. Tu6071]
Length = 875
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRG 659
P +L E + +L K L ++L +V Q+EA +AVA V + + G G R
Sbjct: 551 PVAQLTEDEKQKLMK---------LEEALHSRVVGQEEAVTAVAQAVRRNRAGMGDPDRP 601
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+EL+ G M+ E+ V
Sbjct: 602 VGS-----FLFLGPTGVGKTELAKALAELLFGDENRMVRFDMSEFQEKHTVSRLVGAPPG 656
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R+P+SV+L +++++A V + + ++ GRL D+ GR + +
Sbjct: 657 YVGHEEAGQLTEKVRRSPYSVLLFDEVEKAHPDVFNTLLQVLDDGRLTDAQGRTVDFRHT 716
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 717 VVIMTSN 723
>gi|332982904|ref|YP_004464345.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
BON]
gi|332700582|gb|AEE97523.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
Length = 855
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L E + +L R+ L ++V Q EA AV+ V + + G R
Sbjct: 544 PANQLVEEEAQKLL---------RMEGELHKRVVGQDEAVKAVSEAVRRARTGLKDPNRP 594
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + G MI + E+ V
Sbjct: 595 IGS-----FIFLGPTGVGKTELARALAEFLFGDEDAMIRIDMSEYMEKHTVSRLIGAPPG 649
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P+SV+L ++I++A V + + ++ GRL DS+G+ + N
Sbjct: 650 YVGHEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQILDDGRLTDSHGKTVDFKNT 709
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 710 VIIMTSN 716
>gi|282860246|ref|ZP_06269317.1| putative hemolysin B [Prevotella bivia JCVIHMP010]
gi|282586979|gb|EFB92213.1| putative hemolysin B [Prevotella bivia JCVIHMP010]
Length = 853
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 28/238 (11%)
Query: 580 APEKTHI--EPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQ 637
A E+ I + V D + +S P Q K+ ES+ QL K +D D LK L V Q
Sbjct: 492 AEERAEITEDDVADVVAMMSGVPVQ-KMKESEGIQL-KNMDKD-----LKKL---VIAQD 541
Query: 638 EAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIM 696
+A + + + ++G G+ +F+GP VGK +A L+E++ G+ +
Sbjct: 542 DAIDKMVKAIQRNRIGLKDPNHPIGA-----FMFLGPTGVGKTYLAKKLAEMMFGSKDAL 596
Query: 697 IPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRG 747
I + ++ E R G D+ G E V+R+P+S++LL++I++A V
Sbjct: 597 IRV-DMSEYTESFNTSRLIGAPPGYVGYDEGGQLTERVRRHPYSIVLLDEIEKAHGNVFN 655
Query: 748 NIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGE 805
+ + ++ GRL D GR I N I I+T++ LK QG+ L L+ E
Sbjct: 656 MLLQVLDEGRLTDGNGRLIDFRNTIIIMTSNAGTRQLKEFGQGVGFKAANLNGLSQSE 713
>gi|443622873|ref|ZP_21107390.1| putative Clp protease ATP binding subunit [Streptomyces
viridochromogenes Tue57]
gi|443343606|gb|ELS57731.1| putative Clp protease ATP binding subunit [Streptomyces
viridochromogenes Tue57]
Length = 849
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 578 ESAPEKTHIEPVKDFLGCISSEP---PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVW 634
E A E H+E + + + S P + L E + D+L L + L E+V
Sbjct: 495 EEADEGQHLEVTAEAIAEVVSRQTGIPVSSLTEEEKDRLLG---------LEEHLHERVV 545
Query: 635 WQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGAS 693
Q EA V+ V + + G R GS LF+GP VGK ++A AL+E + G+
Sbjct: 546 GQDEAVRVVSDAVLRSRAGLASPNRPIGS-----FLFLGPTGVGKTELARALAEALFGSE 600
Query: 694 PIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVV 745
M+ L E V G ++ E V+R+P+S++LL+++++A V
Sbjct: 601 ERMVRLDMSEYQERHTVSRLIGAPPGYVGHEEAGQLTEVVRRHPYSLLLLDEVEKAHPDV 660
Query: 746 RGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
+ + ++ GRL DS GR + N + ++T++
Sbjct: 661 FNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNL 694
>gi|397685796|ref|YP_006523115.1| ClpB protein [Pseudomonas stutzeri DSM 10701]
gi|395807352|gb|AFN76757.1| ClpB protein [Pseudomonas stutzeri DSM 10701]
Length = 854
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRG 659
P +K+ E + D+L K D L ++V Q EA +VA V + + G R
Sbjct: 547 PVSKMLEGERDKLLKMED---------LLHQRVIGQHEAVVSVANAVRRSRAGLADPNRP 597
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
+GS LF+GP VGK ++ AL+E + MI + E+ V G
Sbjct: 598 SGS-----FLFLGPTGVGKTELCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPG 652
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
++ G EAV+R P+SV+LL+++++A V + + +E GRL DS+GR + N
Sbjct: 653 YVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNT 712
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 713 VIVMTSN 719
>gi|352517669|ref|YP_004886986.1| chaperone ClpB [Tetragenococcus halophilus NBRC 12172]
gi|348601776|dbj|BAK94822.1| chaperone ClpB [Tetragenococcus halophilus NBRC 12172]
Length = 868
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 14/163 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L ++L ++V Q EA +AV+ V + + G R GS LF+GP VGK ++A
Sbjct: 565 LNETLHKRVIGQDEAVNAVSDAVIRSRAGLQNPDRPLGS-----FLFLGPTGVGKTELAK 619
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
AL+E + + M+ + E+ V G ++ EAV+RNP+++ILL
Sbjct: 620 ALAENIFDSEDHMVRIDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTEAVRRNPYTIILL 679
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + ++ GRL DS GR ++ N + I+T++
Sbjct: 680 DEIEKAHPDVFNILLQVLDDGRLTDSKGRVVNFKNTVLIMTSN 722
>gi|255547217|ref|XP_002514666.1| chaperone clpb, putative [Ricinus communis]
gi|223546270|gb|EEF47772.1| chaperone clpb, putative [Ricinus communis]
Length = 912
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 14/169 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L + L ++V Q +A SAVA V + + G G+ ++ GS LF+GP VGK ++A
Sbjct: 563 LAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPTGS-----FLFLGPTGVGKTELAK 617
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
AL+E + M+ + E+ V G ++ EAV+R P+SV+L
Sbjct: 618 ALAEQLFDDENQMVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLF 677
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
+++++A + V + + ++ GRL D GR + N + I+T++ + L
Sbjct: 678 DEVEKAHLSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL 726
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 23/187 (12%)
Query: 32 HGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALERLPTAQQNVS 91
H Q TPLH+A L+ P+ QA N+ +A + + A+++LP+ Q+
Sbjct: 26 HAQLTPLHLAVALITDPNAIFSQAI----SNAGGESASQAAQRVLNNAIKKLPS--QSPP 79
Query: 92 PGLDPPISNALMAALKRAQAHQR-RGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMR 150
P PP S +L+ ++RAQA Q+ RG LAV +QLI+ +L+D + +++
Sbjct: 80 PDEIPP-STSLIKVIRRAQALQKSRGDSH------LAV----DQLILGLLEDSQIGDLLK 128
Query: 151 EASFSSPAVKATIEQSLNSSCSVSNSSPIGLGFRPSSRNLYMNPRLQQAGG---VCGGQS 207
E+ ++ VK+ +E+ S+ F+ + Y ++QAG V G
Sbjct: 129 ESGIAAGKVKSEVEKLRGKEGKKVESATADTNFQ--ALKTYGRDLVEQAGKLDPVIGRDE 186
Query: 208 EPEMVVR 214
E VVR
Sbjct: 187 EIRRVVR 193
>gi|452990568|emb|CCQ98240.1| class III stress response-related ATPase, AAA+ superfamily
[Clostridium ultunense Esp]
Length = 812
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 17/175 (9%)
Query: 623 KRLLK---SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
+RLL +L EKV Q +A AV+ V + ++G ++ G+ +F+GP VGK
Sbjct: 498 QRLLNLEDTLHEKVIGQNQAVEAVSNAVRRARVGLKDPKKPVGT-----FIFVGPTGVGK 552
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPF 730
+A AL+E + G MI + E+ V R+ G D+ G EAV+R P+
Sbjct: 553 TYLAKALAETLFGDEESMIRIDMSEYMEKHSVSRLVGSPPGYVGYDEGGQLTEAVRRKPY 612
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
SVIL ++I++A V + + ++ GRL DS GR + N + I+T++ S++
Sbjct: 613 SVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDFKNTVIIMTSNVGATSIR 667
>gi|333980531|ref|YP_004518476.1| ATPase AAA [Desulfotomaculum kuznetsovii DSM 6115]
gi|333824012|gb|AEG16675.1| ATPase AAA-2 domain protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 828
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L RL + L ++V Q EA AVA +V + + G +R
Sbjct: 492 PVKKLAEEETERLL---------RLEEILHQRVVGQDEAVRAVARSVRRARAGLKDPKRP 542
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + G ++ L E V
Sbjct: 543 IGS-----FIFLGPTGVGKTELARALAEALFGDEDALVRLDMSEYMERFAVSRLVGAPPG 597
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P++V+LL++I++A V + + +E GRL D+ GR + N
Sbjct: 598 YVGYEEGGQLTEAVRRKPYTVVLLDEIEKAHPDVFNILLQVLEDGRLTDAKGRTVDFRNT 657
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 658 VIIMTSN 664
>gi|260583906|ref|ZP_05851654.1| ATP-dependent chaperone protein ClpB [Granulicatella elegans ATCC
700633]
gi|260158532|gb|EEW93600.1| ATP-dependent chaperone protein ClpB [Granulicatella elegans ATCC
700633]
Length = 867
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
+L +L E+V Q EA VA V + + G R GS LF+GP VGK ++A
Sbjct: 566 QLEDTLHERVIGQDEAVQKVADAVLRSRAGLQNPNRPIGS-----FLFLGPTGVGKTELA 620
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
L+E + + M+ + E+ V G ++ EAV+RNP++++L
Sbjct: 621 KTLAENLFDSQDHMVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTEAVRRNPYTIVL 680
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
L++I++A V + + ++ GRL DS GR + N +FI+T++
Sbjct: 681 LDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNTVFIMTSN 724
>gi|302522782|ref|ZP_07275124.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
gi|302431677|gb|EFL03493.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
Length = 845
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRG 659
P +L E + +L K L ++L +V Q+EA +AVA V + + G G R
Sbjct: 521 PVAQLTEDEKQKLMK---------LEEALHSRVVGQEEAVTAVAQAVRRNRAGMGDPDRP 571
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+EL+ G M+ E+ V
Sbjct: 572 VGS-----FLFLGPTGVGKTELAKALAELLFGDENRMVRFDMSEFQEKHTVSRLVGAPPG 626
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R+P+SV+L +++++A V + + ++ GRL D+ GR + +
Sbjct: 627 YVGHEEAGQLTEKVRRSPYSVLLFDEVEKAHPDVFNTLLQVLDDGRLTDAQGRTVDFRHT 686
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 687 VVIMTSN 693
>gi|192359582|ref|YP_001983648.1| chaperone ClpB [Cellvibrio japonicus Ueda107]
gi|190685747|gb|ACE83425.1| ClpB [Cellvibrio japonicus Ueda107]
Length = 892
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 16/181 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ ++L ++V Q EA AV+ V + + G + R GS LF+GP VGK ++
Sbjct: 569 RMEEALHKRVIGQHEAVVAVSNAVRRARAGLSDANRPNGS-----FLFLGPTGVGKTELC 623
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVI 733
AL+E + S M+ + E+ V R G ++ G E+V+R P+SV+
Sbjct: 624 KALAEFLFDTSDAMVRIDMSEFMEKHSV-ARLIGAPPGYVGYEEGGYLTESVRRKPYSVV 682
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITL 793
LL+++++A V + + +E GRL D GR + N + ++T++ D ++ L++ +
Sbjct: 683 LLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQELAEDKSF 742
Query: 794 D 794
D
Sbjct: 743 D 743
>gi|40060485|gb|AAR37417.1| heat shock protein HSP101 [Zea mays]
Length = 912
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + L L ++V Q EA SAVA V + + G G+ ++ GS LF+GP V
Sbjct: 557 DKERLVGLADRLHQRVVGQTEAVSAVAEAVLRSRAGLGRPQQPTGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+E + +++ + E+ V G ++ E V+R
Sbjct: 612 GKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTEQVRRR 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+SVIL +++++A + V + + ++ GRL D GR ++ N + I+T++
Sbjct: 672 PYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVNFRNTVIIMTSN 721
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 25/203 (12%)
Query: 17 ASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCF 76
A V H IA + H Q TPLH+AA L A G LRQA + + + E
Sbjct: 13 AIVGAHEIAVEA--GHAQLTPLHLAAVLAADKGGILRQAI--TGASGGDGAAGDSFERVL 68
Query: 77 SVALERLPTAQQNVSPGLDP-PISNALMAALKRAQ-AHQRRGCPEQQQQPLLAVKVELEQ 134
+ +L++LP+ SP D P S AL+ ++RAQ A ++RG LAV +Q
Sbjct: 69 NNSLKKLPSQ----SPPPDSVPASTALIKVIRRAQSAQKKRGDSH------LAV----DQ 114
Query: 135 LIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIGLGFRPSSRNLYMNP 194
L++ +L+D +S ++EA S+ V+A +E+ S+ F+ + Y
Sbjct: 115 LLLGLLEDSQISDCLKEAGVSAARVRAELEKLRGGEGRRVESASGDTNFQ--ALKTYGRD 172
Query: 195 RLQQAGG---VCGGQSEPEMVVR 214
++QAG V G E VVR
Sbjct: 173 LVEQAGKLDPVIGRDEEIRRVVR 195
>gi|229545227|ref|ZP_04433952.1| S14 family endopeptidase Clp [Enterococcus faecalis TX1322]
gi|256763055|ref|ZP_05503635.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T3]
gi|256853703|ref|ZP_05559068.1| chaperone protein clpB [Enterococcus faecalis T8]
gi|256956642|ref|ZP_05560813.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Enterococcus
faecalis DS5]
gi|256963536|ref|ZP_05567707.1| AAA ATPase [Enterococcus faecalis HIP11704]
gi|257079568|ref|ZP_05573929.1| AAA ATPase [Enterococcus faecalis JH1]
gi|257082053|ref|ZP_05576414.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis E1Sol]
gi|257087392|ref|ZP_05581753.1| AAA ATPase [Enterococcus faecalis D6]
gi|257090526|ref|ZP_05584887.1| ATP-dependent Clp protease ATP-binding subunit [Enterococcus
faecalis CH188]
gi|257416567|ref|ZP_05593561.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Enterococcus
faecalis ARO1/DG]
gi|257419819|ref|ZP_05596813.1| ATP-dependent Clp protease, ATP-binding subunit, partial
[Enterococcus faecalis T11]
gi|294781440|ref|ZP_06746781.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis PC1.1]
gi|300860809|ref|ZP_07106896.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TUSoD
Ef11]
gi|307270881|ref|ZP_07552168.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX4248]
gi|307271475|ref|ZP_07552747.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0855]
gi|307287757|ref|ZP_07567797.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0109]
gi|307291032|ref|ZP_07570919.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0411]
gi|312903722|ref|ZP_07762896.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0635]
gi|384513757|ref|YP_005708850.1| chaperone protein ClpB [Enterococcus faecalis OG1RF]
gi|384519183|ref|YP_005706488.1| ATP-dependent chaperone ClpB [Enterococcus faecalis 62]
gi|397700555|ref|YP_006538343.1| ATP-dependent chaperone ClpB [Enterococcus faecalis D32]
gi|422684254|ref|ZP_16742497.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX4000]
gi|422690149|ref|ZP_16748216.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0630]
gi|422697792|ref|ZP_16755723.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1346]
gi|422701399|ref|ZP_16759240.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1342]
gi|422703729|ref|ZP_16761549.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1302]
gi|422709935|ref|ZP_16767281.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0027]
gi|422724812|ref|ZP_16781288.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX2137]
gi|422736841|ref|ZP_16793103.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1341]
gi|422869826|ref|ZP_16916331.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1467]
gi|424675747|ref|ZP_18112644.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis 599]
gi|424760626|ref|ZP_18188238.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis R508]
gi|430359357|ref|ZP_19425773.1| S14 family endopeptidase Clp [Enterococcus faecalis OG1X]
gi|430370714|ref|ZP_19429184.1| S14 family endopeptidase Clp [Enterococcus faecalis M7]
gi|229309577|gb|EEN75564.1| S14 family endopeptidase Clp [Enterococcus faecalis TX1322]
gi|256684306|gb|EEU24001.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T3]
gi|256710646|gb|EEU25689.1| chaperone protein clpB [Enterococcus faecalis T8]
gi|256947138|gb|EEU63770.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Enterococcus
faecalis DS5]
gi|256954032|gb|EEU70664.1| AAA ATPase [Enterococcus faecalis HIP11704]
gi|256987598|gb|EEU74900.1| AAA ATPase [Enterococcus faecalis JH1]
gi|256990083|gb|EEU77385.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis E1Sol]
gi|256995422|gb|EEU82724.1| AAA ATPase [Enterococcus faecalis D6]
gi|256999338|gb|EEU85858.1| ATP-dependent Clp protease ATP-binding subunit [Enterococcus
faecalis CH188]
gi|257158395|gb|EEU88355.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Enterococcus
faecalis ARO1/DG]
gi|257161647|gb|EEU91607.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T11]
gi|294451478|gb|EFG19939.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis PC1.1]
gi|295113401|emb|CBL32038.1| ATP-dependent chaperone ClpB [Enterococcus sp. 7L76]
gi|300849848|gb|EFK77598.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TUSoD
Ef11]
gi|306497935|gb|EFM67465.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0411]
gi|306501206|gb|EFM70510.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0109]
gi|306511747|gb|EFM80745.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0855]
gi|306512794|gb|EFM81439.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX4248]
gi|310632914|gb|EFQ16197.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0635]
gi|315025179|gb|EFT37111.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX2137]
gi|315031001|gb|EFT42933.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX4000]
gi|315035659|gb|EFT47591.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0027]
gi|315164771|gb|EFU08788.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1302]
gi|315166449|gb|EFU10466.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1341]
gi|315170340|gb|EFU14357.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1342]
gi|315173627|gb|EFU17644.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1346]
gi|315576903|gb|EFU89094.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0630]
gi|323481316|gb|ADX80755.1| ATP-dependent chaperone ClpB [Enterococcus faecalis 62]
gi|327535646|gb|AEA94480.1| chaperone protein ClpB [Enterococcus faecalis OG1RF]
gi|329569969|gb|EGG51724.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX1467]
gi|397337194|gb|AFO44866.1| ATP-dependent chaperone ClpB [Enterococcus faecalis D32]
gi|402350383|gb|EJU85287.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis 599]
gi|402403319|gb|EJV35998.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis R508]
gi|429513377|gb|ELA02961.1| S14 family endopeptidase Clp [Enterococcus faecalis OG1X]
gi|429515272|gb|ELA04789.1| S14 family endopeptidase Clp [Enterococcus faecalis M7]
Length = 868
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLMK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YIGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGIT 792
+ I+T++ + L +G+T
Sbjct: 716 VLIMTSNI---GSQLLLEGVT 733
>gi|227534738|ref|ZP_03964787.1| ATP-binding subunit of chaperone [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|301066806|ref|YP_003788829.1| Clp protease/DnaK/DnaJ chaperone ATP-binding subunit [Lactobacillus
casei str. Zhang]
gi|417980952|ref|ZP_12621629.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
12A]
gi|417983778|ref|ZP_12624414.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
21/1]
gi|417993415|ref|ZP_12633763.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
CRF28]
gi|417996630|ref|ZP_12636908.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
M36]
gi|418002452|ref|ZP_12642570.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
UCD174]
gi|418011192|ref|ZP_12650958.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
Lc-10]
gi|227187494|gb|EEI67561.1| ATP-binding subunit of chaperone [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|300439213|gb|ADK18979.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus casei str. Zhang]
gi|410523888|gb|EKP98807.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
12A]
gi|410528047|gb|EKQ02909.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
21/1]
gi|410531523|gb|EKQ06245.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
CRF28]
gi|410534969|gb|EKQ09599.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
M36]
gi|410544108|gb|EKQ18446.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
UCD174]
gi|410552829|gb|EKQ26843.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
Lc-10]
Length = 741
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 432 LKNLAGDLEKHVIGQNEAVDKVARAIRRNRIGFNKSGRPIGS-----FLFVGPTGVGKTE 486
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 487 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 546
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 547 ILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 592
>gi|149181371|ref|ZP_01859868.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
sp. SG-1]
gi|148850934|gb|EDL65087.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
sp. SG-1]
Length = 700
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++ + L +L +V Q EA V+ + + + G + R
Sbjct: 393 PVGKLQEDEQKKMNE---------LQSNLNSQVIGQDEAVKTVSKAIRRSRAGLKNRNRP 443
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ L++ + G + MI L E+ +
Sbjct: 444 IGS-----FLFIGPTGVGKTELSKTLAQELFGTAEAMIRLDMSEYMEKHSISKLIGSPPG 498
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+S+ILL++I++A V+ + +E GRL DS GR +S +
Sbjct: 499 YVGHEEAGQLSEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDS 558
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 559 VIIMTSN 565
>gi|375094252|ref|ZP_09740517.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora marina XMU15]
gi|374654985|gb|EHR49818.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora marina XMU15]
Length = 843
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 14/163 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L + L +V Q +A +AV+ V + + G + R +GS LF+GP VGK ++A
Sbjct: 532 LEEHLHGRVVGQDDAVAAVSEAVRRTRAGLAEPNRPSGS-----FLFLGPTGVGKTELAR 586
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
AL+E + G+ MI L E V G ++ EAV+R P+SVILL
Sbjct: 587 ALAEALFGSEDRMIRLDMSEYGERHTVSRLVGAPPGYVGYEEAGQLTEAVRRRPYSVILL 646
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + ++ GRL D GR ++ N + I+T++
Sbjct: 647 DEIEKAHPDVFNMLLQVLDDGRLTDGRGRTVNFTNTVLIMTSN 689
>gi|339634833|ref|YP_004726474.1| ATP-dependent Clp protease ATP-binding subunit [Weissella koreensis
KACC 15510]
gi|420160832|ref|ZP_14667603.1| ATP-binding subunit of chaperone [Weissella koreensis KCTC 3621]
gi|338854629|gb|AEJ23795.1| ATP-dependent Clp protease ATP-binding subunit [Weissella koreensis
KACC 15510]
gi|394745582|gb|EJF34400.1| ATP-binding subunit of chaperone [Weissella koreensis KCTC 3621]
Length = 688
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 25/207 (12%)
Query: 583 KTHIEPVKDFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAA 640
KT + V+D + ++ P L ++ QLQ L +L + V Q+EA
Sbjct: 365 KTQVIDVEDIQKIVEEKTKIPVGDLQNAEQKQLQN---------LANNLADHVIGQEEAT 415
Query: 641 SAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPL 699
+ VA + + ++G N R GS LF+GP VGK + A L++ + G + +I
Sbjct: 416 TKVARAIRRNRVGFNKANRPIGS-----FLFVGPTGVGKTETAKQLAKELFGTTDSLIRF 470
Query: 700 GPRRDHEEPEVRV-----RGKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKR 751
E+ V G D+ G EAV+RNP+S+ILL+++++A V +
Sbjct: 471 DMSEYMEKHSVSKLIGAPAGYIGYDEAGQLTEAVRRNPYSLILLDEVEKAHPDVMNMFLQ 530
Query: 752 AMERGRLVDSYGREISLGNVIFILTAD 778
++ GRL D+ G +S + I I+T++
Sbjct: 531 ILDDGRLTDAQGHTVSFKDTIIIMTSN 557
>gi|428780885|ref|YP_007172671.1| ATP-dependent chaperone ClpB [Dactylococcopsis salina PCC 8305]
gi|428695164|gb|AFZ51314.1| ATP-dependent chaperone ClpB [Dactylococcopsis salina PCC 8305]
Length = 894
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 23/198 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ Q+ L + + L E+V Q+EA SAV+ + + + G R
Sbjct: 570 PVNRLLESER---QRLLGLEGY------LHERVIGQKEAVSAVSAAIRRARAGMKDPARP 620
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LFMGP VGK ++A A++E + +I + E+ V
Sbjct: 621 IGS-----FLFMGPTGVGKTELARAMAEFLFDTEESLIRIDMSEYMEKHSVSRLVGAPPG 675
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E ++R P+SV+LL+++++A V + + ++ GR+ DS GR I N
Sbjct: 676 YVGYEEGGQLSEQIRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRVIDFRNT 735
Query: 772 IFILTADWLPDSLKFLSQ 789
I ++T++ D + SQ
Sbjct: 736 IIVMTSNIGGDDILQFSQ 753
>gi|385820467|ref|YP_005856854.1| chaperone ATPase [Lactobacillus casei LC2W]
gi|385823654|ref|YP_005859996.1| chaperone ATPase [Lactobacillus casei BD-II]
gi|327382794|gb|AEA54270.1| ATPase with chaperone activity, ATP-binding subunit [Lactobacillus
casei LC2W]
gi|327385981|gb|AEA57455.1| ATPase with chaperone activity, ATP-binding subunit [Lactobacillus
casei BD-II]
Length = 741
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 432 LKNLAGDLEKHVIGQNEAVDKVARAIRRNRIGFNKSGRPIGS-----FLFVGPTGVGKTE 486
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 487 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 546
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 547 ILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 592
>gi|422719793|ref|ZP_16776416.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0017]
gi|315032832|gb|EFT44764.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX0017]
Length = 898
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 580 PVTKLVEGEREKLMK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 630
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 631 LGS-----FLFLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 685
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 686 YIGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 745
Query: 772 IFILTADWLPDSLKFLSQGIT 792
+ I+T++ + L +G+T
Sbjct: 746 VLIMTSNI---GSQLLLEGVT 763
>gi|239916624|ref|YP_002956182.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|281414926|ref|ZP_06246668.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|239837831|gb|ACS29628.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
Length = 875
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 628 SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALS 686
+L E+V Q EA + V+ + + + G RR GS +F+GP VGK ++A AL+
Sbjct: 573 TLKERVVGQDEAITLVSDAIIRARSGIRDPRRPIGS-----FIFLGPTGVGKTELAKALA 627
Query: 687 ELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDI 738
E + + MI L E V G ++ EAV+R P+SV+LL++I
Sbjct: 628 EALFDSESAMIRLDMSEYQERHTVSRLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEI 687
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++A V + + ++ GR+ DS GR + N I I+T++
Sbjct: 688 EKAHPDVFNTLLQVLDDGRITDSQGRTVDFRNTIIIMTSN 727
>gi|78189926|ref|YP_380264.1| ATPase [Chlorobium chlorochromatii CaD3]
gi|78172125|gb|ABB29221.1| ATPase [Chlorobium chlorochromatii CaD3]
Length = 439
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 613 LQKPLDPDSFKRLL--KSLMEKVWWQQEAASAVATTVTQCKLGNG-KRRGAGSKGDMWLL 669
L K L + K LL L ++V Q EA +AV+ V + + G G ++R GS +
Sbjct: 121 LSKMLQTERQKLLLIEDELHKRVIGQHEAVTAVSEAVKRSRAGMGDEKRPIGS-----FI 175
Query: 670 FMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKI 721
F+GP VGK ++A L++ + MI + E V G ++
Sbjct: 176 FLGPTGVGKTELARTLADYLFDDEDAMIRIDMSEYMESHNVSRLVGAPPGYVGYEEGGQL 235
Query: 722 GEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
EAV+R PFSV+LL++I++A V + + ++ GRL DS GR ++ N I I+T++
Sbjct: 236 TEAVRRKPFSVVLLDEIEKAHPDVFNILLQILDDGRLTDSKGRTVNFKNCIIIMTSN 292
>gi|319654839|ref|ZP_08008914.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
gi|317393402|gb|EFV74165.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
Length = 816
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 31/268 (11%)
Query: 533 QLNRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVL---ESAPEKTHIEPV 589
+L L D + V SQ E+A S ++ R L +K + E + + V
Sbjct: 415 ELEVKLEDVRKEKDAAVQSQEFEKAASLRDTEQRLREQLEETKKTWKEKQGKENSEV-TV 473
Query: 590 KDFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTV 647
+D ++S P +KL +++ ++L L + L +V Q+EA A++ V
Sbjct: 474 EDIANVVASWTGIPVSKLAQTETEKLLN---------LEEILHSRVIGQEEAVKAISKAV 524
Query: 648 TQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
+ + G +R GS +F+GP VGK ++A AL+E + G MI + ++
Sbjct: 525 RRARAGLKDPKRPIGS-----FVFLGPTGVGKTELARALAEAMFGDEDAMIRI-DMSEYM 578
Query: 707 EPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGR 757
E R G ++ G E V+R P+SV+LL++I++A V + + +E GR
Sbjct: 579 EKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGR 638
Query: 758 LVDSYGREISLGNVIFILTADWLPDSLK 785
L DS GR + N + I+T++ ++LK
Sbjct: 639 LTDSKGRTVDFRNTVLIMTSNVGAEALK 666
>gi|307277225|ref|ZP_07558329.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX2134]
gi|421512936|ref|ZP_15959726.1| ClpB protein [Enterococcus faecalis ATCC 29212]
gi|306506155|gb|EFM75321.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX2134]
gi|401673943|gb|EJS80311.1| ClpB protein [Enterococcus faecalis ATCC 29212]
Length = 868
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLMK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YIGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGIT 792
+ I+T++ + L +G+T
Sbjct: 716 VLIMTSNI---GSQLLLEGVT 733
>gi|217076783|ref|YP_002334499.1| negative regulator of genetic competence ClpC/mecB [Thermosipho
africanus TCF52B]
gi|217036636|gb|ACJ75158.1| negative regulator of genetic competence ClpC/mecB [Thermosipho
africanus TCF52B]
Length = 735
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 32/239 (13%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
++AV L+ +LG+ +V E KT +E + ++ P K+ E + ++L
Sbjct: 387 DKAVDLLDESASRIKILGKKEVTEEDIAKT-VE--------MWTKIPVGKMLEGEKEKL- 436
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K L K + EK Q+EA V++ + + G +R AG LF+GP
Sbjct: 437 --------KNLEKIIHEKFVDQEEAVKVVSSAIRMSRTGIRNLKRPAG-----VFLFLGP 483
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAV 725
VGK ++A LSE++ G+S +I + E+ V G ++ EAV
Sbjct: 484 TGVGKTELAKRLSEILFGSSQSLIRIDMSEYMEKHSVARLIGAPPGYVGHEQGGQLTEAV 543
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
+R P+SVIL ++I++A+ V + + + GRL D G + N I I+T++ + +
Sbjct: 544 RRRPYSVILFDEIEKANPEVFNVLLQVFDDGRLTDGKGNTVDFRNTIIIMTSNLASEEI 602
>gi|442320740|ref|YP_007360761.1| ClpA/B family protein [Myxococcus stipitatus DSM 14675]
gi|441488382|gb|AGC45077.1| ClpA/B family protein [Myxococcus stipitatus DSM 14675]
Length = 863
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
D RL + L E+V +EA + +A + + G RR GS LF+GP VG
Sbjct: 551 DSARLLRLEQDLGERVIGHEEAIARIARVIRRNYAGFASRRPMGS-----FLFLGPTGVG 605
Query: 678 KKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGKTAL-------DKIGEAVKRNP 729
K +MA L+E++ G ++ L E V R+ G A ++ E V+R P
Sbjct: 606 KTEMARGLAEVLFGNRDALVRLDMSELSEAHGVSRLIGSPAGYVGFGEGGQLTEPVRRRP 665
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
SV++L++I++A V+ + + +E GRL D GR I N + ++T +
Sbjct: 666 SSVVVLDEIEKAHREVQMLLLQVLEEGRLTDGKGRHIDFSNTVIVMTTNL 715
>gi|348174862|ref|ZP_08881756.1| Clp protease ATP binding subunit [Saccharopolyspora spinosa NRRL
18395]
Length = 843
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 14/164 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMA 682
RL ++L E+V Q EA AVA V + + G R GS LF+GP VGK ++
Sbjct: 527 RLEEALHERVVGQDEAVLAVAEAVRRNRAGMAHPDRPIGS-----FLFLGPTGVGKTELG 581
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
AL+EL+ G +I E+ V G ++ E V+R P+SV+L
Sbjct: 582 KALAELMFGDEHKLIRFDMSEFQEKHTVSRLVGAPPGYVGYEEAGQLTEKVRRQPYSVLL 641
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + ++ GRL D+ GR + N + I+T++
Sbjct: 642 FDEIEKAHRDVFNTLLQVLDDGRLTDAQGRTVDFRNTVVIMTSN 685
>gi|443311162|ref|ZP_21040795.1| ATP-dependent chaperone ClpB [Synechocystis sp. PCC 7509]
gi|442778802|gb|ELR89062.1| ATP-dependent chaperone ClpB [Synechocystis sp. PCC 7509]
Length = 879
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ QK L +S L E+V Q EA AV+ + + + G R
Sbjct: 554 PVNRLLESER---QKLLQLES------HLHERVIGQTEAVEAVSAAIRRARAGMKDPGRP 604
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LFMGP VGK ++A AL++ + A ++ L E+ V
Sbjct: 605 IGS-----FLFMGPTGVGKTELARALAQFLFDADDALVRLDMSEYMEKHSVSRLVGAPPG 659
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P+SV+LL+++++A V + + ++ GR+ DS GR + N
Sbjct: 660 YVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFRNS 719
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 720 VIVMTSN 726
>gi|422695871|ref|ZP_16753849.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX4244]
gi|315146641|gb|EFT90657.1| ATP-dependent chaperone protein ClpB [Enterococcus faecalis TX4244]
Length = 868
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 26/201 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E + ++L K L ++L ++V Q EA AV+ V + + G R
Sbjct: 550 PVTKLVEGEREKLMK---------LNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + + M+ + E+ V
Sbjct: 601 LGS-----FLFLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPG 655
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+RNP++++LL++I++A V + + ++ GRL DS GR + N
Sbjct: 656 YIGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNT 715
Query: 772 IFILTADWLPDSLKFLSQGIT 792
+ I+T++ + L +G+T
Sbjct: 716 VLIMTSNI---GSQLLLEGVT 733
>gi|417999499|ref|ZP_12639708.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
T71499]
gi|418012522|ref|ZP_12652222.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
Lpc-37]
gi|410539130|gb|EKQ13668.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
T71499]
gi|410556746|gb|EKQ30621.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
Lpc-37]
Length = 741
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 432 LKNLAGDLEKHVIGQNEAVDKVARAIRRNRIGFNKSGRPIGS-----FLFVGPTGVGKTE 486
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 487 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 546
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 547 ILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 592
>gi|391227736|ref|ZP_10263943.1| ATP-dependent chaperone ClpB [Opitutaceae bacterium TAV1]
gi|391223229|gb|EIQ01649.1| ATP-dependent chaperone ClpB [Opitutaceae bacterium TAV1]
Length = 904
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 28/204 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L ES+ ++L RL + L E+V Q EA + + + + G RR
Sbjct: 594 PVTRLVESEREKLL---------RLGEVLHERVIGQDEAVQLTSEAILRARAGIKDPRRP 644
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS LF+GP VGK ++A L+E + + MI + E+ V R
Sbjct: 645 VGS-----FLFLGPTGVGKTELAKTLAETLFDSEAAMIRIDMSEYMEKHSV-ARLIGAPP 698
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P++V+L ++I++A V + + ++ GR+ DS GR + N
Sbjct: 699 GYVGYDEGGQLTEAVRRKPYAVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKN 758
Query: 771 VIFILTADWLPDSLKFLSQGITLD 794
I I+T++ ++L G+T D
Sbjct: 759 TIIIMTSNI---GSRYLLDGVTGD 779
>gi|424899245|ref|ZP_18322791.1| ATPase with chaperone activity, ATP-binding subunit [Prevotella
bivia DSM 20514]
gi|388593459|gb|EIM33697.1| ATPase with chaperone activity, ATP-binding subunit [Prevotella
bivia DSM 20514]
Length = 852
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 28/238 (11%)
Query: 580 APEKTHI--EPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQ 637
A E+ I + V D + +S P Q K+ ES+ QL K +D D LK L V Q
Sbjct: 491 AEERAEITEDDVADVVAMMSGVPVQ-KMKESEGIQL-KNMDKD-----LKKL---VIAQD 540
Query: 638 EAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIM 696
+A + + + ++G G+ +F+GP VGK +A L+E++ G+ +
Sbjct: 541 DAIDKMVKAIQRNRIGLKDPNHPIGA-----FMFLGPTGVGKTYLAKKLAEMMFGSKDAL 595
Query: 697 IPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRG 747
I + ++ E R G D+ G E V+R+P+S++LL++I++A V
Sbjct: 596 IRV-DMSEYTESFNTSRLIGAPPGYVGYDEGGQLTERVRRHPYSIVLLDEIEKAHGNVFN 654
Query: 748 NIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSLASGE 805
+ + ++ GRL D GR I N I I+T++ LK QG+ L L+ E
Sbjct: 655 MLLQVLDEGRLTDGNGRLIDFRNTIIIMTSNAGTRQLKEFGQGVGFKAANLNGLSQSE 712
>gi|153813963|ref|ZP_01966631.1| hypothetical protein RUMTOR_00170 [Ruminococcus torques ATCC 27756]
gi|317501491|ref|ZP_07959689.1| ATPase AAA-2 domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088037|ref|ZP_08336958.1| hypothetical protein HMPREF1025_00541 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336439725|ref|ZP_08619331.1| hypothetical protein HMPREF0990_01725 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145848359|gb|EDK25277.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus torques ATCC 27756]
gi|316897120|gb|EFV19193.1| ATPase AAA-2 domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|330408993|gb|EGG88452.1| hypothetical protein HMPREF1025_00541 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336015317|gb|EGN45135.1| hypothetical protein HMPREF0990_01725 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 814
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL ES D D K+L L ++V Q+EA AVA V + ++G +R
Sbjct: 489 PVQKLAES---------DTDRLKKLESVLHQRVIGQEEAVKAVARAVKRGRVGLKDPKRP 539
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK +++ AL+E + G MI + E+ V
Sbjct: 540 IGS-----FLFLGPTGVGKTELSKALAEAMFGNEESMIRVDMSEYMEKHSVSKMIGSPPG 594
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ + V+ +P+SV+L ++I++A V + + ++ G + DS GR+I N
Sbjct: 595 YVGHEEGGQLSDQVRTHPYSVLLFDEIEKAHPDVFNILLQVLDDGHITDSKGRKIDFSNT 654
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 655 VIIMTSN 661
>gi|116333409|ref|YP_794936.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus brevis ATCC 367]
gi|116098756|gb|ABJ63905.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus brevis ATCC 367]
Length = 870
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
+L L E+V Q +A SAVA V + + G + GS LF+GP VGK ++A
Sbjct: 563 KLADHLHERVVGQDQAVSAVADAVLRSRAGLQDPTKPLGS-----FLFLGPTGVGKTELA 617
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRNPFSVIL 734
AL+E + + M+ + E+ V A +G EAV+RNP++++L
Sbjct: 618 KALAENLFDSEDHMVRIDMSEYMEKESVSRLVGAAPGYVGYEEGGQLTEAVRRNPYTIVL 677
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+++++A V + + ++ GRL DS GR + N I I+T++
Sbjct: 678 FDEVEKAHPDVFNLLLQVLDDGRLTDSQGRTVDFKNTILIMTSN 721
>gi|409417475|ref|ZP_11257524.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
sp. HYS]
Length = 854
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRR 658
P +K+ E + ++L K ++SL+ E+V Q+EA AV+ V + + G + R
Sbjct: 547 PVSKMLEGEREKLLK----------MESLLHERVIGQEEAVVAVSNAVRRSRAGLSDPNR 596
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK-- 715
+GS LF+GP VGK ++ AL+E + M+ + E+ V R+ G
Sbjct: 597 PSGS-----FLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPP 651
Query: 716 --TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
++ G EAV+R P+SV+LL+++++A V + + +E GRL DS+GR + N
Sbjct: 652 GYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRN 711
Query: 771 VIFILTAD 778
+ ++T++
Sbjct: 712 TVIVMTSN 719
>gi|262047134|ref|ZP_06020093.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
crispatus MV-3A-US]
gi|260572711|gb|EEX29272.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
crispatus MV-3A-US]
Length = 730
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 42/233 (18%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
++ V P SPV TD ++ K++E EKT I PV D + + + +QLQ
Sbjct: 388 DQKVDPDKSPVITDKIM--DKIVE---EKTGI-PVGD-------------IQKQEENQLQ 428
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
L L V Q +A VA + + ++G N R GS LF+GP
Sbjct: 429 N---------LAADLKAHVIGQDKAVEKVARAIRRNRIGFNKSGRPIGS-----FLFVGP 474
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAV 725
VGK ++A L++ + G+ MI E+ V G ++ E V
Sbjct: 475 TGVGKTELAKQLAKQMFGSEDAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTEQV 534
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ NP+S+ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 535 RHNPYSLILLDEIEKAHPDVLNLFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 587
>gi|428308083|ref|YP_007144908.1| ATP-dependent chaperone ClpB [Crinalium epipsammum PCC 9333]
gi|428249618|gb|AFZ15398.1| ATP-dependent chaperone ClpB [Crinalium epipsammum PCC 9333]
Length = 885
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 23/193 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N L ES+ +L K L L ++V QQEA +AV+ + + + G R
Sbjct: 560 PVNSLLESERQKLLK---------LESHLHQRVIGQQEAVAAVSAAIRRARAGMKDPGRP 610
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LFMGP VGK ++A AL++ + + ++ + E+ V
Sbjct: 611 IGS-----FLFMGPTGVGKTELARALAQFLFDSEEALVRIDMSEYMEKHAVSRLVGAPPG 665
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EA++R P+SV+LL+++++A V + + ++ GR+ DS GR + N
Sbjct: 666 YVGYEEGGQLSEAIRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFCNT 725
Query: 772 IFILTADWLPDSL 784
+ ++T++ D +
Sbjct: 726 VIVMTSNIGSDHI 738
>gi|366085658|ref|ZP_09452143.1| ATP-dependent clp protease ATP-binding subunit [Lactobacillus zeae
KCTC 3804]
Length = 699
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 389 LKNLASDLEKHVIGQNEAVDKVARAIRRNRIGFNKTGRPIGS-----FLFVGPTGVGKTE 443
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 444 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 503
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 504 ILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 549
>gi|194337784|ref|YP_002019578.1| ATPase AAA-2 domain-containing protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194310261|gb|ACF44961.1| ATPase AAA-2 domain protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 440
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 613 LQKPLDPDSFKRLL--KSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLL 669
L K L D K LL L ++V Q+EA +AV+ V + + G G +R GS +
Sbjct: 121 LSKMLQSDRQKLLLIEDELHKRVIGQEEAVTAVSEAVKRSRAGMGDDKRPIGS-----FI 175
Query: 670 FMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKI 721
F+GP VGK ++A L++ + MI + E V G ++
Sbjct: 176 FLGPTGVGKTELARTLADYLFDDEDAMIRIDMSEYMEAHTVSRLVGAPPGYVGYEEGGQL 235
Query: 722 GEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
EAV+R PF+V+LL++I++A V + + ++ GRL DS GR ++ N I I+T++
Sbjct: 236 TEAVRRKPFAVVLLDEIEKAHPDVFNILLQILDDGRLTDSKGRTVNFKNTIIIMTSN 292
>gi|373850028|ref|ZP_09592829.1| ATP-dependent chaperone ClpB [Opitutaceae bacterium TAV5]
gi|372476193|gb|EHP36202.1| ATP-dependent chaperone ClpB [Opitutaceae bacterium TAV5]
Length = 904
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 28/204 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L ES+ ++L RL + L E+V Q EA + + + + G RR
Sbjct: 594 PVTRLVESEREKLL---------RLGEVLHERVIGQDEAVQLTSEAILRARAGIKDPRRP 644
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS LF+GP VGK ++A L+E + + MI + E+ V R
Sbjct: 645 VGS-----FLFLGPTGVGKTELAKTLAETLFDSEAAMIRIDMSEYMEKHSV-ARLIGAPP 698
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P++V+L ++I++A V + + ++ GR+ DS GR + N
Sbjct: 699 GYVGYDEGGQLTEAVRRKPYAVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKN 758
Query: 771 VIFILTADWLPDSLKFLSQGITLD 794
I I+T++ ++L G+T D
Sbjct: 759 TIIIMTSNI---GSRYLLDGVTGD 779
>gi|226533379|ref|NP_001141435.1| uncharacterized protein LOC100273545 [Zea mays]
gi|194704568|gb|ACF86368.1| unknown [Zea mays]
Length = 474
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 32/195 (16%)
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAG------------S 662
K L ++ K L +L ++V WQ E +A+TV QC+ G +RR A +
Sbjct: 188 KELSAENLKVLCSALEKEVPWQAEIVPEIASTVLQCRSGMARRREAAVSSSRPSSTQACA 247
Query: 663 KGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRR----------DHEEPEVRV 712
K D W+LF G D GK ++A L+ LV G+ + +G R D + R
Sbjct: 248 KEDTWMLFHGGDAEGKARVARELARLVFGSRKSFVSIGGSRTTASSPACWSDGSSEQQRK 307
Query: 713 RGK--------TALDKIGEAVKRNPFSVILLEDIDEADM-VVRGNIKRAMERGRLVDSYG 763
R + + + EAV+ NP VIL++D+++ + +I A++ G + G
Sbjct: 308 RPRLTEASNHGCRHESLYEAVRDNPHRVILVQDVEQGGCWRCQRDILEAIQSGLVRSRAG 367
Query: 764 -REISLGNVIFILTA 777
+ +LG+ I +L+
Sbjct: 368 DDDAALGDAIVVLSC 382
>gi|328954749|ref|YP_004372082.1| ATP-dependent chaperone ClpB [Coriobacterium glomerans PW2]
gi|328455073|gb|AEB06267.1| ATP-dependent chaperone ClpB [Coriobacterium glomerans PW2]
Length = 872
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 14/178 (7%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
+ K L L +V Q EA SAVA+ V + + G + R GS F+GP VGK
Sbjct: 561 EKLKTLESELHRRVIGQDEAVSAVASAVRRSRAGLSDPNRPIGS-----FFFLGPTGVGK 615
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPF 730
++A AL+E + ++ + E+ V+ G D+ G EA++R P+
Sbjct: 616 TELAKALAECLFDDERALVRIDMSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAIRRRPY 675
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLS 788
SVILL+++++A V + + ++ GRL D GR++S N I I+T++ ++ LS
Sbjct: 676 SVILLDEMEKAHPDVFNVLLQVLDDGRLTDGQGRQVSFKNTIVIMTSNVASTAIAELS 733
>gi|381208304|ref|ZP_09915375.1| ATP-dependent Clp protease [Lentibacillus sp. Grbi]
Length = 810
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 19/182 (10%)
Query: 617 LDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
L D +RLL ++L +V Q+EA AVA + + + G +R GS +F+G
Sbjct: 494 LTKDESERLLNLEETLHNRVIGQEEAVEAVAKAIRRARAGLKDPKRPIGS-----FIFLG 548
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---E 723
P VGK ++A AL+E + MI + ++ E R G D+ G E
Sbjct: 549 PTGVGKTELARALAESMFADEEAMIRI-DMSEYMEKHATSRLVGSPPGYVGYDEGGQLTE 607
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDS 783
V+ P+SV+LL+++++A V + + +E GRL DS GR + N + I+T++ +
Sbjct: 608 KVRTKPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVLIMTSNVGANE 667
Query: 784 LK 785
LK
Sbjct: 668 LK 669
>gi|340356808|ref|ZP_08679449.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
gi|339620146|gb|EGQ24717.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
Length = 817
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 25/195 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +K+ E+++ +L K + + L E+V Q EA A++ + + + G +R
Sbjct: 490 PVDKIAETESAKLLK---------MEEILHERVIGQNEAVLAISRAIRRARAGLKDPKRP 540
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A AL+E++ G MI + ++ E R
Sbjct: 541 IGS-----FIFLGPTGVGKTELARALAEVMFGDEDAMIRI-DMSEYMEKHATSRLVGSPP 594
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ G E V+R P+SV+LL++I++A V + + +E GRL DS GR + N
Sbjct: 595 GYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRN 654
Query: 771 VIFILTADWLPDSLK 785
+ I+T++ LK
Sbjct: 655 TVMIMTSNVGATELK 669
>gi|385800597|ref|YP_005837001.1| ATPase [Halanaerobium praevalens DSM 2228]
gi|309389961|gb|ADO77841.1| ATPase AAA-2 domain protein [Halanaerobium praevalens DSM 2228]
Length = 806
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 23/198 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E++ ++L RL L E+V Q EA +AV+ V + + G +R
Sbjct: 486 PVTKLEEAETEKLL---------RLESELHERVIGQDEAINAVSEAVRRARAGLKAPKRP 536
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK--- 715
GS +F+GP VGK ++A L+E + MI + E+ V R+ G
Sbjct: 537 IGS-----FIFLGPTGVGKTELAKTLAETMFNDEEAMIRVDMSEYMEKHSVSRLVGSPPG 591
Query: 716 -TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+R P+SVIL ++I++A V + + +E G L DS+GR++ N
Sbjct: 592 YVGHDEGGQLTEPVRRRPYSVILFDEIEKAHPDVFNILLQILEDGVLTDSHGRKVDFKNT 651
Query: 772 IFILTADWLPDSLKFLSQ 789
I ++T++ D ++ SQ
Sbjct: 652 IVVMTSNVGADFIEKQSQ 669
>gi|309789553|ref|ZP_07684134.1| ATP-dependent chaperone ClpB [Oscillochloris trichoides DG-6]
gi|308228289|gb|EFO81936.1| ATP-dependent chaperone ClpB [Oscillochloris trichoides DG6]
Length = 859
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 25/199 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +KL E + ++L K + + L +V Q EA +AV+ V + + G RR
Sbjct: 548 PVSKLLEGEVEKLVK---------MEERLHLRVIGQDEAVAAVSNAVRRSRAGLQDPRRP 598
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS LF+GP VGK ++A AL+E + M+ + ++ E R
Sbjct: 599 LGS-----FLFLGPTGVGKTELARALAEFLFDDEQAMVRI-DMSEYMEKHTVARLIGAPP 652
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+L ++I++A V + + ++ GRL D GR ++ N
Sbjct: 653 GYIGYDEGGQLTEAVRRKPYSVVLFDEIEKAHSDVFNVLLQVLDDGRLTDGQGRVVNFKN 712
Query: 771 VIFILTADWLPDSLKFLSQ 789
V+ I+T++ ++ ++Q
Sbjct: 713 VVVIMTSNIASGLIQEMTQ 731
>gi|291542191|emb|CBL15301.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
bromii L2-63]
Length = 821
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E+V Q EA +A+A + + ++G +R GS +F+GP VGK ++ AL+E
Sbjct: 514 LHERVIGQSEAVTAIAKAIRRGRVGLKDPKRPVGS-----FIFLGPTGVGKTELCKALAE 568
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDID 739
+ G M+ L E+ V G ++ G E V+R P+SV+L ++I+
Sbjct: 569 AMFGDENAMLRLDMSEYMEKHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPYSVVLFDEIE 628
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V + + +E GRL DS GR + N I I+T++
Sbjct: 629 KAHPDVFNMLLQILEDGRLTDSQGRTVDFKNTIIIMTSN 667
>gi|148658380|ref|YP_001278585.1| ATPase [Roseiflexus sp. RS-1]
gi|148570490|gb|ABQ92635.1| ATPase AAA-2 domain protein [Roseiflexus sp. RS-1]
Length = 871
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +V Q EA SAVA V + + G R GS LF+GP VGK ++A AL+E
Sbjct: 569 LHRRVVGQDEAVSAVANAVRRARAGLQDPNRPLGS-----FLFLGPTGVGKTELARALAE 623
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ MI + E+ V G ++ EAV+R P+SV+L ++++
Sbjct: 624 FLFDDEQAMIRIDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVE 683
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQ 789
+A V + + ++ GRL D +GR ++ N + I+T++ +++ L+Q
Sbjct: 684 KAHHDVFNILLQILDDGRLTDGHGRVVNFKNTVIIMTSNIASPTIQELAQ 733
>gi|392407856|ref|YP_006444464.1| chaperone ATPase [Anaerobaculum mobile DSM 13181]
gi|390620992|gb|AFM22139.1| ATPase with chaperone activity, ATP-binding subunit [Anaerobaculum
mobile DSM 13181]
Length = 829
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ + + +++ Q+EA S VA + + + G +R GS LF+GP VGK +++
Sbjct: 507 RMEEEIHKRIIDQEEAVSVVARAIRRARSGLKDPKRPIGS-----FLFLGPTGVGKTELS 561
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
AL+E + G MI L E EV G K+ EAV+R P++V+L
Sbjct: 562 KALAEFLFGDENSMIRLDMSEFMERHEVSKLIGAPPGYVGYEEGGKLTEAVRRRPYAVVL 621
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + +E GRL D GR + N + I+T++
Sbjct: 622 FDEIEKAHPDVFNILLQILEDGRLTDGQGRVVDFKNTVIIMTSN 665
>gi|357160412|ref|XP_003578756.1| PREDICTED: chaperone protein ClpC2, chloroplastic-like
[Brachypodium distachyon]
Length = 920
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG--NGKRRGAGSKGDMWLLFMGPDR 675
+ D ++ ++L ++V Q EA A++ +V + ++G N R A +F GP
Sbjct: 591 ESDKLLKMEETLHKRVIGQDEAVKAISRSVRRARVGLKNPNRPIAS------FIFAGPTG 644
Query: 676 VGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKR 727
VGK ++A AL+ G+ MI L E V G T ++ EAV+R
Sbjct: 645 VGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 704
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+SV+L ++I++A V + + +E GRL DS GR + N + I+T++
Sbjct: 705 RPYSVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 755
>gi|255326112|ref|ZP_05367199.1| negative regulator of genetic competence ClpC/mecB [Rothia
mucilaginosa ATCC 25296]
gi|255296823|gb|EET76153.1| negative regulator of genetic competence ClpC/mecB [Rothia
mucilaginosa ATCC 25296]
Length = 851
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 591 DFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTV 647
D G ++ E L S + K + +S RLL + L ++V Q+ A +A++ +
Sbjct: 476 DAFGTVTPEVISEVLAASTGVPVYKITEEES-SRLLTMEQELHKRVIGQEHAIAALSRAI 534
Query: 648 TQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
+ + G RR GS +F GP VGK ++A AL+E + G +I L +++
Sbjct: 535 RRTRAGLKDPRRPGGS-----FIFAGPTGVGKTELAKALAEFLFGDEDSLITL-DMSEYQ 588
Query: 707 EPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGR 757
E R G D+ G E V+R PFSV+L +++++A + ++ + +E GR
Sbjct: 589 EKHTVSRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHADLFNSLLQILEDGR 648
Query: 758 LVDSYGREISLGNVIFILTADW 779
L DS GR + N + I+T +
Sbjct: 649 LTDSQGRVVDFKNTVIIMTTNL 670
>gi|381182154|ref|ZP_09890974.1| ATP-dependent protease clpE [Listeriaceae bacterium TTU M1-001]
gi|380317959|gb|EIA21258.1| ATP-dependent protease clpE [Listeriaceae bacterium TTU M1-001]
Length = 716
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L EKV Q+EA + + + ++G K R GS LF+GP VGK +
Sbjct: 412 LKDLEAHLNEKVIGQKEAVKKITKAIRRGRVGLKQKNRPIGS-----FLFVGPTGVGKTE 466
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ L+ + G+ MI L E+ V G ++ E ++RNP+S+
Sbjct: 467 LGRTLANELFGSEDAMIRLDMSEFMEQHSVSKLIGSPPGYVGHEEAGQLTEKIRRNPYSI 526
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL+++++A V+ + +E GRL DS GR +S + + I+T++
Sbjct: 527 LLLDEMEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 572
>gi|318077308|ref|ZP_07984640.1| chaperone [Streptomyces sp. SA3_actF]
Length = 806
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRG 659
P +L E + +L K L ++L +V Q+EA +AVA V + + G G R
Sbjct: 488 PVAQLTEDEKQKLMK---------LEEALHSRVVGQEEAVTAVAQAVRRNRAGMGDPDRP 538
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+EL+ G M+ E+ V
Sbjct: 539 VGS-----FLFLGPTGVGKTELAKALAELLFGDENRMVRFDMSEFQEKHTVSRLVGAPPG 593
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R+P+SV+L +++++A V + + ++ GRL D+ GR + +
Sbjct: 594 YVGHEEAGQLTEKVRRSPYSVLLFDEVEKAHPDVFNTLLQVLDDGRLTDAQGRTVDFRHT 653
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 654 VVIMTSN 660
>gi|317496540|ref|ZP_07954889.1| ATPase [Gemella morbillorum M424]
gi|316913343|gb|EFV34840.1| ATPase [Gemella morbillorum M424]
Length = 824
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E+++++L K L + L E+V Q EA +++A V + + G + R
Sbjct: 503 PVTKLTETESERLLK---------LEEILHERVIGQDEAVTSLAKAVRRARSGFKAENRP 553
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A +LSE + + MI + ++ EP R
Sbjct: 554 IGS-----FIFLGPTGVGKTELAKSLSEALFSSEDNMIRI-DMSEYMEPHSISRLVGAPP 607
Query: 714 ---GKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ E V++ P+SV+L ++I++A + + + ++ GRL D+ GR I N
Sbjct: 608 GYVGYEEAGQLSEQVRQKPYSVVLFDEIEKAHPSIFNILLQVLDDGRLTDASGRTIDFKN 667
Query: 771 VIFILTADWLPDSLK 785
I I+T++ LK
Sbjct: 668 TIIIMTSNVGVSELK 682
>gi|170723706|ref|YP_001751394.1| ATP-dependent chaperone ClpB [Pseudomonas putida W619]
gi|169761709|gb|ACA75025.1| ATP-dependent chaperone ClpB [Pseudomonas putida W619]
Length = 854
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 116/233 (49%), Gaps = 32/233 (13%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +T+ L R+KV E+ E V + G P K+ E + ++L
Sbjct: 510 ERSLQMVDQHGKTENQLLRNKV----TEEEIAEVVSKWTGI-----PVAKMLEGEREKLL 560
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K D L ++V Q EA +AVA V + + G + R +GS +F+GP
Sbjct: 561 KMED---------LLHQRVIGQHEAVTAVANAVRRSRAGLSDPNRPSGS-----FMFLGP 606
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAV 725
VGK ++ AL+E + M+ + E+ V R+ G ++ G EAV
Sbjct: 607 TGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAV 666
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SV+LL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 667 RRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
>gi|50955646|ref|YP_062934.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
gi|50952128|gb|AAT89829.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
Length = 839
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 14/162 (8%)
Query: 627 KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASAL 685
K+L ++V Q+EA +A++ T+ + + G +R +GS +F GP VGK ++A AL
Sbjct: 509 KALHQRVIGQEEAIAALSKTIRRTRAGLKDPKRPSGS-----FIFAGPTGVGKTELAKAL 563
Query: 686 SELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVILLED 737
+E + MI L E+ V R+ G + G E V+R PFSV+L ++
Sbjct: 564 AEFLFDDETAMISLDMSEYGEKHTVSRLFGAPPGFVGFEDGGQLTEKVRRKPFSVVLFDE 623
Query: 738 IDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
I++A + ++ + +E GRL D GR + N + I+T +
Sbjct: 624 IEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNL 665
>gi|410454418|ref|ZP_11308357.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
gi|409932233|gb|EKN69200.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
Length = 813
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 29/267 (10%)
Query: 533 QLNRNLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVL--ESAPEKTHIEPVK 590
+L L + + + V SQ E+A S ++ R L +K E ++ + V+
Sbjct: 415 ELEVKLDEVRKEKDSAVQSQEFEKAASLRDTEQRLREQLEETKKTWKEKQGKENNEVTVE 474
Query: 591 DFLGCISS--EPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVT 648
D +SS P +KL E++ +L L + L ++ Q+EA AV+ V
Sbjct: 475 DIASVVSSWTGVPVSKLAETETAKLLN---------LEEILHSRIIGQEEAVIAVSKAVR 525
Query: 649 QCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEE 707
+ + G +R GS +F+GP VGK ++A AL+E + G MI + ++ E
Sbjct: 526 RARAGLKDPKRPIGS-----FVFLGPTGVGKTELARALAEAMFGDEDAMIRI-DMSEYME 579
Query: 708 PEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRL 758
R G ++ G E V+R P+SVILL++I++A V + + +E GRL
Sbjct: 580 KHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRL 639
Query: 759 VDSYGREISLGNVIFILTADWLPDSLK 785
DS GR + N + I+T++ + LK
Sbjct: 640 TDSKGRTVDFRNTVLIMTSNVGAEQLK 666
>gi|227877158|ref|ZP_03995232.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
crispatus JV-V01]
gi|256842712|ref|ZP_05548200.1| ATP-dependent Clp protease [Lactobacillus crispatus 125-2-CHN]
gi|256848979|ref|ZP_05554413.1| ATP-dependent Clp protease [Lactobacillus crispatus MV-1A-US]
gi|293380262|ref|ZP_06626340.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
crispatus 214-1]
gi|295692511|ref|YP_003601121.1| ATP-dependent clp protease, ATP-binding subunit [Lactobacillus
crispatus ST1]
gi|312977765|ref|ZP_07789512.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
crispatus CTV-05]
gi|423317981|ref|ZP_17295878.1| hypothetical protein HMPREF9250_01586 [Lactobacillus crispatus
FB049-03]
gi|423321322|ref|ZP_17299194.1| hypothetical protein HMPREF9249_01194 [Lactobacillus crispatus
FB077-07]
gi|227863212|gb|EEJ70657.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
crispatus JV-V01]
gi|256614132|gb|EEU19333.1| ATP-dependent Clp protease [Lactobacillus crispatus 125-2-CHN]
gi|256714518|gb|EEU29505.1| ATP-dependent Clp protease [Lactobacillus crispatus MV-1A-US]
gi|290923171|gb|EFE00096.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
crispatus 214-1]
gi|295030617|emb|CBL50096.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
crispatus ST1]
gi|310895504|gb|EFQ44571.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
crispatus CTV-05]
gi|405596318|gb|EKB69663.1| hypothetical protein HMPREF9249_01194 [Lactobacillus crispatus
FB077-07]
gi|405597360|gb|EKB70633.1| hypothetical protein HMPREF9250_01586 [Lactobacillus crispatus
FB049-03]
Length = 730
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 42/233 (18%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
++ V P SPV TD ++ K++E EKT I PV D + + + +QLQ
Sbjct: 388 DQKVDPDKSPVITDKIM--DKIVE---EKTGI-PVGD-------------IQKQEENQLQ 428
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
L L V Q +A VA + + ++G N R GS LF+GP
Sbjct: 429 N---------LAADLKAHVIGQDKAVEKVARAIRRNRIGFNKSGRPIGS-----FLFVGP 474
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAV 725
VGK ++A L++ + G+ MI E+ V G ++ E V
Sbjct: 475 TGVGKTELAKQLAKQMFGSEDAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTEQV 534
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ NP+S+ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 535 RHNPYSLILLDEIEKAHPDVLNLFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 587
>gi|421504377|ref|ZP_15951319.1| ATPase [Pseudomonas mendocina DLHK]
gi|400344932|gb|EJO93300.1| ATPase [Pseudomonas mendocina DLHK]
Length = 947
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
L K L E++ Q EA AVA V + G + GSK LF+GP VGK ++A A
Sbjct: 607 LEKRLHERLVGQDEAVRAVADAVRLSRAGLRE----GSKPVATFLFLGPTGVGKTELAKA 662
Query: 685 LSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVILL 735
L+E V G+ ++ + ++ E R G D+ G E V+R P+SV+LL
Sbjct: 663 LAESVYGSEGALLRI-DMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLLL 721
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
++I++A V + + + GRL D GR + N I I T++ D ++
Sbjct: 722 DEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQ 771
>gi|355676751|ref|ZP_09060247.1| hypothetical protein HMPREF9469_03284 [Clostridium citroniae
WAL-17108]
gi|354813340|gb|EHE97951.1| hypothetical protein HMPREF9469_03284 [Clostridium citroniae
WAL-17108]
Length = 850
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++++L K L L ++V Q+EA +A++ + + ++G R
Sbjct: 493 PVRKLAEEESERL---------KNLEGILHQRVVGQEEAVTAISKAIRRGRVGLKDPGRP 543
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ ALSE + G +I + E+ V G
Sbjct: 544 IGS-----FLFLGPTGVGKTELSKALSEAMFGTENALIRVDMSEYMEKHSVSKMIGSPPG 598
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+RNP+SVIL ++I++A V + + ++ G + D+ GR+I N
Sbjct: 599 YVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKIDFKNT 658
Query: 772 IFILTAD 778
I I+T++
Sbjct: 659 IIIMTSN 665
>gi|426411549|ref|YP_007031648.1| chaperone ClpB [Pseudomonas sp. UW4]
gi|426269766|gb|AFY21843.1| chaperone ClpB [Pseudomonas sp. UW4]
Length = 854
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 36/235 (15%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ + + L RSKV E+ E V + G P +K+ E + D+L
Sbjct: 510 ERSLQMVDQHGKAENQLLRSKV----TEEEIAEVVSKWTGI-----PVSKMLEGERDKLM 560
Query: 615 KPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
K ++SL+ ++V Q EA AV+ V + + G + R +GS +F+G
Sbjct: 561 K----------MESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGS-----FMFLG 605
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---E 723
P VGK ++ AL+E + M+ + E+ V R G ++ G E
Sbjct: 606 PTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAPPGYVGYEEGGYLTE 664
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
AV+R P+SVIL++++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 665 AVRRKPYSVILMDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSN 719
>gi|357136409|ref|XP_003569797.1| PREDICTED: chaperone protein ClpB1-like isoform 2 [Brachypodium
distachyon]
Length = 920
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L ++V Q EA SAVA V + + G G+ ++ GS LF+GP VGK ++A AL+E
Sbjct: 568 LHQRVVGQHEAVSAVAEAVLRSRAGLGRPQQPTGS-----FLFLGPTGVGKTELAKALAE 622
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ +++ + E+ V G ++ E V+R P+SVIL ++++
Sbjct: 623 QLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTEQVRRRPYSVILFDEVE 682
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
+A + V + + ++ GRL D GR + N + I+T++ + L
Sbjct: 683 KAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL 727
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 16/135 (11%)
Query: 32 HGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALERLPTAQQNVS 91
H Q TPLH+AA L A SG LRQA +H + + + E + AL+RLP+ Q
Sbjct: 26 HAQLTPLHLAAALAADRSGILRQAI--AHASGGNDSAAESFERVAAAALKRLPS--QAPP 81
Query: 92 PGLDPPISNALMAALKRAQAHQR-RGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMR 150
P PP S +L+ A++RAQ+ Q+ RG LAV +QL+I +L+D +S ++
Sbjct: 82 PDAVPP-STSLVKAIRRAQSAQKSRGDSH------LAV----DQLLIGLLEDSQISDALK 130
Query: 151 EASFSSPAVKATIEQ 165
EA S+ VKA +E+
Sbjct: 131 EAGVSAARVKAEVEK 145
>gi|357136407|ref|XP_003569796.1| PREDICTED: chaperone protein ClpB1-like isoform 1 [Brachypodium
distachyon]
Length = 913
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L ++V Q EA SAVA V + + G G+ ++ GS LF+GP VGK ++A AL+E
Sbjct: 568 LHQRVVGQHEAVSAVAEAVLRSRAGLGRPQQPTGS-----FLFLGPTGVGKTELAKALAE 622
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ +++ + E+ V G ++ E V+R P+SVIL ++++
Sbjct: 623 QLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTEQVRRRPYSVILFDEVE 682
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
+A + V + + ++ GRL D GR + N + I+T++ + L
Sbjct: 683 KAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL 727
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 16/135 (11%)
Query: 32 HGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALERLPTAQQNVS 91
H Q TPLH+AA L A SG LRQA +H + + + E + AL+RLP+ Q
Sbjct: 26 HAQLTPLHLAAALAADRSGILRQAI--AHASGGNDSAAESFERVAAAALKRLPS--QAPP 81
Query: 92 PGLDPPISNALMAALKRAQAHQR-RGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMR 150
P PP S +L+ A++RAQ+ Q+ RG LAV +QL+I +L+D +S ++
Sbjct: 82 PDAVPP-STSLVKAIRRAQSAQKSRGDSH------LAV----DQLLIGLLEDSQISDALK 130
Query: 151 EASFSSPAVKATIEQ 165
EA S+ VKA +E+
Sbjct: 131 EAGVSAARVKAEVEK 145
>gi|4590326|gb|AAD26530.1|AF083327_1 101 kDa heat shock protein [Zea mays]
Length = 582
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + L L ++V Q EA SAVA V + + G G+ ++ GS LF+GP V
Sbjct: 227 DKERLVGLADRLHQRVVGQTEAVSAVAEAVLRSRAGLGRPQQPTGS-----FLFLGPTGV 281
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+E + +++ + E+ V G ++ E V+R
Sbjct: 282 GKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTEQVRRR 341
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+SVIL +++++A + V + + ++ GRL D GR + N + I+T++
Sbjct: 342 PYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 391
>gi|354585457|ref|ZP_09004344.1| ATPase AAA-2 domain protein [Paenibacillus lactis 154]
gi|353188726|gb|EHB54246.1| ATPase AAA-2 domain protein [Paenibacillus lactis 154]
Length = 818
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E + ++L L + L +V Q+EA AV+ V + + G +R
Sbjct: 487 PVNKLKEEETERLLN---------LEEILHSRVIGQEEAVKAVSRAVRRARAGLKDPKRP 537
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A AL+E + G ++ + ++ E R
Sbjct: 538 MGS-----FIFLGPTGVGKTELARALAEAMFGDENAVVRI-DMSEYMEKHSTARLVGAPP 591
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ G E V+R P+SV+LL++I++A V + + +E GRL DS GR + N
Sbjct: 592 GYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRN 651
Query: 771 VIFILTADWLPDSLK 785
+ ILT++ +++K
Sbjct: 652 TLIILTSNVGAEAIK 666
>gi|312958896|ref|ZP_07773415.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Pseudomonas
fluorescens WH6]
gi|311286666|gb|EFQ65228.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Pseudomonas
fluorescens WH6]
Length = 854
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ + + L RSKV E+ E V + G P +K+ E + D+L
Sbjct: 510 ERSLQMVDQHGKAENQLLRSKV----TEEEIAEVVSKWTGI-----PVSKMLEGERDKLL 560
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K + L ++V Q+EA AV+ V + + G + R +GS +F+GP
Sbjct: 561 K---------MEHLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGS-----FMFLGP 606
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EA 724
VGK ++ AL+E + M+ + E+ V R G ++ G EA
Sbjct: 607 TGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAPPGYVGYEEGGYLTEA 665
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V+R P+SVILL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 666 VRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
>gi|296131785|ref|YP_003639032.1| ATPase AAA [Thermincola potens JR]
gi|296030363|gb|ADG81131.1| ATPase AAA-2 domain protein [Thermincola potens JR]
Length = 810
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 14/159 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L ++V Q EA AV+ V + + G +R GS +F+GP VGK ++A AL+E
Sbjct: 507 LHQRVIGQDEAVKAVSRAVRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAE 561
Query: 688 LVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVILLEDID 739
+ G M+ + E+ V R+ G D+ G EAV+R P+SV+LL++I+
Sbjct: 562 ALFGDEDAMVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIE 621
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V + + +E GRL D+ GR + N + I+T++
Sbjct: 622 KAHPEVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSN 660
>gi|398948515|ref|ZP_10672836.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM33]
gi|398160568|gb|EJM48835.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM33]
Length = 854
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 36/235 (15%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ + + L RSKV E+ E V + G P +K+ E + D+L
Sbjct: 510 ERSLQMVDQHGKAENQLLRSKV----TEEEIAEVVSKWTGI-----PVSKMLEGERDKLM 560
Query: 615 KPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
K ++SL+ ++V Q EA AV+ V + + G + R +GS +F+G
Sbjct: 561 K----------MESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGS-----FMFLG 605
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---E 723
P VGK ++ AL+E + M+ + E+ V R G ++ G E
Sbjct: 606 PTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAPPGYVGYEEGGYLTE 664
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
AV+R P+SVIL++++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 665 AVRRKPYSVILMDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSN 719
>gi|162458166|ref|NP_001104935.1| heat-shock protein 101 [Zea mays]
gi|4584957|gb|AAD25223.1|AF077337_1 heat shock protein 101 [Zea mays]
gi|4928488|gb|AAD33606.1|AF133840_1 heat shock protein HSP101 [Zea mays]
Length = 912
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 14/176 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + L L ++V Q EA SAVA V + + G G+ ++ GS LF+GP V
Sbjct: 557 DKERLVGLADRLHQRVVGQTEAVSAVAEAVLRSRAGLGRPQQPTGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+E + +++ + E+ V G ++ E V+R
Sbjct: 612 GKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTEQVRRR 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
P+SVIL +++++A + V + + ++ GRL D GR + N + I+T++ + L
Sbjct: 672 PYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL 727
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 25/203 (12%)
Query: 17 ASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCF 76
A V H IA + H Q TPLH+AA L A G LRQA + + + E
Sbjct: 13 AIVGAHEIAVEA--GHAQLTPLHLAAVLAADKGGILRQAI--TGASGGDGAAGDSFERVL 68
Query: 77 SVALERLPTAQQNVSPGLDP-PISNALMAALKRAQ-AHQRRGCPEQQQQPLLAVKVELEQ 134
+ +L++LP+ SP D P S AL+ ++RAQ A ++RG LAV +Q
Sbjct: 69 NNSLKKLPSQ----SPPPDSVPASTALIKVIRRAQSAQKKRGDSH------LAV----DQ 114
Query: 135 LIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIGLGFRPSSRNLYMNP 194
L++ +L+D +S ++EA S+ V+A +E+ S+ F+ + Y
Sbjct: 115 LLLGLLEDSQISDCLKEAGVSAARVRAELEKLRGGEGRRVESASGDTNFQ--ALKTYGRD 172
Query: 195 RLQQAGG---VCGGQSEPEMVVR 214
++QAG V G E VVR
Sbjct: 173 LVEQAGKLDPVIGRDEEIRRVVR 195
>gi|223975969|gb|ACN32172.1| unknown [Zea mays]
gi|413946195|gb|AFW78844.1| heat-shock protein 101 [Zea mays]
Length = 912
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 14/176 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + L L ++V Q EA SAVA V + + G G+ ++ GS LF+GP V
Sbjct: 557 DKERLVGLADRLHQRVVGQTEAVSAVAEAVLRSRAGLGRPQQPTGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+E + +++ + E+ V G ++ E V+R
Sbjct: 612 GKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTEQVRRR 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
P+SVIL +++++A + V + + ++ GRL D GR + N + I+T++ + L
Sbjct: 672 PYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL 727
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 25/203 (12%)
Query: 17 ASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCF 76
A V H IA + H Q TPLH+AA L A G LRQA + + + E
Sbjct: 13 AIVGAHEIAVEA--GHAQLTPLHLAAVLAADKGGILRQAI--TGASGGDGAAGDSFERVL 68
Query: 77 SVALERLPTAQQNVSPGLDP-PISNALMAALKRAQ-AHQRRGCPEQQQQPLLAVKVELEQ 134
+ +L++LP+ SP D P S AL+ ++RAQ A ++RG LAV +Q
Sbjct: 69 NNSLKKLPSQ----SPPPDSVPASTALIKVIRRAQSAQKKRGDSH------LAV----DQ 114
Query: 135 LIISILDDPSVSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIGLGFRPSSRNLYMNP 194
L++ +L+D +S ++EA S+ V+A +E+ S+ F+ + Y
Sbjct: 115 LLLGLLEDSQISDCLKEAGVSAARVRAELEKLRGGEGRRVESASGDTNFQ--ALKTYGRD 172
Query: 195 RLQQAGG---VCGGQSEPEMVVR 214
++QAG V G E VVR
Sbjct: 173 LVEQAGKLDPVIGRDEEIRRVVR 195
>gi|447915151|ref|YP_007395719.1| chaperone [Pseudomonas poae RE*1-1-14]
gi|445199014|gb|AGE24223.1| chaperone [Pseudomonas poae RE*1-1-14]
Length = 854
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 34/234 (14%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ + + L RSKV E+ E V + G P +K+ E + D+L
Sbjct: 510 ERSLQMVDQHGKAENQLLRSKV----TEEEIAEVVSKWTGI-----PVSKMLEGERDKLL 560
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K + L ++V Q EA AV+ V + + G + R +GS +F+GP
Sbjct: 561 K---------MESQLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGS-----FMFLGP 606
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EA 724
VGK ++ AL+E + M+ + E+ V R G ++ G EA
Sbjct: 607 TGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAPPGYVGYEEGGYLTEA 665
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V+R P+SVILL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 666 VRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
>gi|403252613|ref|ZP_10918922.1| ATPase [Thermotoga sp. EMP]
gi|418044958|ref|ZP_12683054.1| ATPase AAA-2 domain protein [Thermotoga maritima MSB8]
gi|351678040|gb|EHA61187.1| ATPase AAA-2 domain protein [Thermotoga maritima MSB8]
gi|402812103|gb|EJX26583.1| ATPase [Thermotoga sp. EMP]
Length = 792
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 15/170 (8%)
Query: 636 QQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASP 694
Q+EA VA + + + G R G+ LF+GP VGK ++A L+E++ G+
Sbjct: 499 QEEAVKVVADAIRKARAGIKDPNRPVGT-----FLFLGPTGVGKTELAKTLAEVLFGSEN 553
Query: 695 IMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVR 746
+I + E+ V G ++ EAV+R P+SVILL++I++A V
Sbjct: 554 ALIRIDMTEYMEKHAVSKLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVF 613
Query: 747 GNIKRAMERGRLVDSYGREISLGNVIFILTADWLPD-SLKFLSQGITLDE 795
+ + M+ GRL DS G + N I I+T++ D L ++ +G + DE
Sbjct: 614 NILLQIMDDGRLTDSKGNVVDFKNTIIIMTSNIASDLILNYVKEGKSFDE 663
>gi|392529703|ref|ZP_10276840.1| ATP-dependent Clp protease [Carnobacterium maltaromaticum ATCC
35586]
gi|414084607|ref|YP_006993315.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Carnobacterium
maltaromaticum LMA28]
gi|412998191|emb|CCO12000.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Carnobacterium
maltaromaticum LMA28]
Length = 748
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
+ L + L + V Q EA V+ + + ++G N K R GS LF+GP VGK +
Sbjct: 431 LRNLAEDLQQHVIGQNEAVEKVSKAIRRSRIGLNKKNRPIGS-----FLFVGPTGVGKTE 485
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSV 732
+A L+ + G + +I E+ V G D+ G E V+RNP+S+
Sbjct: 486 LAKQLAVELFGTADSIIRFDMSEYMEKHSVAKLIGSPPGYVGYDEAGQLTEKVRRNPYSI 545
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+LL++I++A V + ++ GRL D+ GR +S + I I+T++
Sbjct: 546 VLLDEIEKAHPDVMHMFLQILDDGRLTDAQGRTVSFKDTIIIMTSN 591
>gi|442805829|ref|YP_007373978.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741679|gb|AGC69368.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 765
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 13/162 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKMASA 684
L + L +V Q A +VA + + + ++R S +F+GP VGK ++A A
Sbjct: 461 LEERLHRRVVGQNRAVESVAKAIRRNRSDFRRKRKPSS-----FIFVGPTGVGKTELARA 515
Query: 685 LSELVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLE 736
++E + G+ MI L E+ V G D+ G E V+R P+SVILL+
Sbjct: 516 VAEELFGSEDAMIRLDMSEYMEKHTVSKLIGAPPGYVGFDQGGQLTEKVRRKPYSVILLD 575
Query: 737 DIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+I++A V + + ME GRL DS GR +S N I I+T++
Sbjct: 576 EIEKAHPDVFNILLQIMEDGRLTDSQGRTVSFENTIIIMTSN 617
>gi|431800678|ref|YP_007227581.1| ATPase [Pseudomonas putida HB3267]
gi|430791443|gb|AGA71638.1| ATPase [Pseudomonas putida HB3267]
Length = 854
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 32/233 (13%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +T+ L R+KV E+ E V + G P K+ E + ++L
Sbjct: 510 ERSLQMVDQHGKTENQLLRNKV----TEEEIAEVVSKWTGI-----PVAKMLEGEREKLL 560
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K + + L ++V Q EA +AVA V + + G + R +GS LF+GP
Sbjct: 561 K---------MEELLHQRVIGQNEAVTAVANAVRRSRAGLSDPNRPSGS-----FLFLGP 606
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAV 725
VGK ++ AL+E + M+ + E+ V R+ G ++ G EAV
Sbjct: 607 TGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAV 666
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SV+LL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 667 RRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
>gi|386338816|ref|YP_006034985.1| ATP-dependent chaperone protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|334281452|dbj|BAK29026.1| ATP-dependent chaperone protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 610
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
D D + L + L +V Q EA SA+ +T + G S LF+GP VG
Sbjct: 282 DKDRLEDLTEKLKRRVKGQDEAISAIVDAITIAQAGLQDENKPISS----FLFLGPTGVG 337
Query: 678 KKKMASALSELVSGASPIMIPLG-PRRDHEEPEVRVRGKTALDKIG---EAVKRNPFSVI 733
K +++ A++E + MI +E V+ G A G E+VK+ P+SV+
Sbjct: 338 KTELSKAVAEALFDDETAMIRFDMSEYKQKEDVVKFIGDRATRTKGQLTESVKQKPYSVL 397
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
LL+++++A V + ++ GRL DS GR IS N I I+T +
Sbjct: 398 LLDEVEKAHSEVMDIFLQVLDDGRLTDSTGRVISFKNTIVIMTTN 442
>gi|258513609|ref|YP_003189831.1| ATPase AAA-2 domain-containing protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257777314|gb|ACV61208.1| ATPase AAA-2 domain protein [Desulfotomaculum acetoxidans DSM 771]
Length = 810
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++D+L K + + L ++V Q+EA AV+ V + + G R
Sbjct: 492 PVKKLAEEESDRLLK---------MEEILHQRVIGQEEAVRAVSRAVRRARAGLKDPGRP 542
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A AL+E + G +I + E+ V
Sbjct: 543 VGS-----FIFLGPTGVGKTELARALAEALFGDDDALIRIDMSEYMEKYAVSRLVGAPPG 597
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ +AV+R P+SV+LL++I++A V + + +E GRL DS GR + N
Sbjct: 598 YVGYEEGGQLTKAVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSQGRAVDFRNT 657
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 658 VIIMTSN 664
>gi|440739028|ref|ZP_20918550.1| chaperone [Pseudomonas fluorescens BRIP34879]
gi|440380400|gb|ELQ16967.1| chaperone [Pseudomonas fluorescens BRIP34879]
Length = 854
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 36/235 (15%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ + + L RSKV E+ E V + G P +K+ E + D+L
Sbjct: 510 ERSLQMVDQHGKAENQLLRSKV----TEEEIAEVVSKWTGI-----PVSKMLEGERDKLL 560
Query: 615 KPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
K ++SL+ ++V Q EA AV+ V + + G + R +GS +F+G
Sbjct: 561 K----------MESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGS-----FMFLG 605
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---E 723
P VGK ++ AL+E + M+ + E+ V R G ++ G E
Sbjct: 606 PTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAPPGYVGYEEGGYLTE 664
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
AV+R P+SVILL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 665 AVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
>gi|407278916|ref|ZP_11107386.1| ATP-dependent chaperone ClpB [Rhodococcus sp. P14]
Length = 853
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 28/204 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L E + ++L K L + L E+V Q EA VA V + + G RR
Sbjct: 534 PVARLQEGEREKLLK---------LDEILHERVIGQDEAVQLVADAVIRARSGIRDPRRP 584
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A L+ + + M+ L +++E R
Sbjct: 585 IGS-----FIFLGPTGVGKTELAKTLASALFDSEDNMVRL-DMSEYQERHTVSRLIGAPP 638
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+L ++I++A V + + ++ GR+ DS GR++ N
Sbjct: 639 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRN 698
Query: 771 VIFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L G+T D
Sbjct: 699 TVIIMTSNI---GSQHLLDGVTAD 719
>gi|332295188|ref|YP_004437111.1| ATPase AAA [Thermodesulfobium narugense DSM 14796]
gi|332178291|gb|AEE13980.1| ATPase AAA-2 domain protein [Thermodesulfobium narugense DSM 14796]
Length = 812
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 615 KPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLF 670
K L K+LL ++L +++ Q EA ++A T+ + + G ++ GS LF
Sbjct: 484 KKLTESEMKKLLNLEEALHKRIVSQHEAVVSIAKTLRRTRAGLQDPKKPLGS-----FLF 538
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIG 722
+GP VGK ++A L+E + G+ ++ E+ V G T ++
Sbjct: 539 LGPTGVGKTELAKTLAEYLFGSEESLLRFDMSEYMEKHTVSRLIGAPPGYVGYTEGGQLT 598
Query: 723 EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPD 782
+AV+R P SVIL ++I++A V + + ++ GRL D GR ++ N I I+T++
Sbjct: 599 DAVRRRPSSVILFDEIEKAHPDVFNLLLQILDDGRLTDGKGRTVNFKNTILIMTSNLGTH 658
Query: 783 SLK-----FLSQGITLDEKKLTS 800
LK FL+ +LD +KL S
Sbjct: 659 MLKEGSPGFLASSNSLDYEKLKS 681
>gi|27376515|ref|NP_768044.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium
japonicum USDA 110]
gi|54035839|sp|Q89UL2.1|CLPB_BRAJA RecName: Full=Chaperone protein ClpB
gi|27349656|dbj|BAC46669.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium
japonicum USDA 110]
Length = 879
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 29/214 (13%)
Query: 575 KVLESAPEKTHI-EPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKV 633
+++E A HI + V + G P +K+ E + D+L K D SL ++V
Sbjct: 526 EMMEEAVTANHIAQVVSRWTGV-----PVDKMLEGEKDKLLKMED---------SLGKRV 571
Query: 634 WWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGA 692
Q EA AVAT V + + G R GS +F+GP VGK ++ AL+E +
Sbjct: 572 VGQAEAVHAVATAVRRSRAGLQDPNRPMGS-----FMFLGPTGVGKTELTKALAEYLFND 626
Query: 693 SPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMV 744
M+ L E+ V G D+ G EAV+R P+ V+L ++I++A
Sbjct: 627 ETAMVRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPD 686
Query: 745 VRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V + + ++ GRL D GR + N + I+T++
Sbjct: 687 VFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSN 720
>gi|148545915|ref|YP_001266017.1| ATPase [Pseudomonas putida F1]
gi|148509973|gb|ABQ76833.1| ATPase AAA-2 domain protein [Pseudomonas putida F1]
Length = 854
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 32/233 (13%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +T+ L R+KV E+ E V + G P K+ E + ++L
Sbjct: 510 ERSLQMVDQHGKTENQLLRNKV----TEEEIAEVVSKWTGI-----PVAKMLEGEREKLL 560
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K + + L ++V Q EA +AVA V + + G + R +GS LF+GP
Sbjct: 561 K---------MEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGS-----FLFLGP 606
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAV 725
VGK ++ AL+E + M+ + E+ V R+ G ++ G EAV
Sbjct: 607 TGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAV 666
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SV+LL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 667 RRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
>gi|385835646|ref|YP_005873420.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Lactobacillus
rhamnosus ATCC 8530]
gi|355395137|gb|AER64567.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Lactobacillus
rhamnosus ATCC 8530]
Length = 699
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 389 LKNLASDLEQHVIGQNEAVDKVARAIRRNRIGFNKTGRPIGS-----FLFVGPTGVGKTE 443
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 444 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 503
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + + GRL DS GR +S + I I+T++
Sbjct: 504 ILLDEIEKAHPDVMNMFLQILNDGRLTDSQGRTVSFKDTIIIMTSN 549
>gi|170287861|ref|YP_001738099.1| ATPase [Thermotoga sp. RQ2]
gi|170175364|gb|ACB08416.1| ATPase AAA-2 domain protein [Thermotoga sp. RQ2]
Length = 792
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 15/170 (8%)
Query: 636 QQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASP 694
Q+EA VA + + + G R G+ LF+GP VGK ++A L+E++ G+
Sbjct: 499 QEEAVKVVADAIRKARAGIKDPNRPVGT-----FLFLGPTGVGKTELAKTLAEVLFGSEN 553
Query: 695 IMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVR 746
+I + E+ V G ++ EAV+R P+SVILL++I++A V
Sbjct: 554 ALIRIDMTEYMEKHAVSKLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVF 613
Query: 747 GNIKRAMERGRLVDSYGREISLGNVIFILTADWLPD-SLKFLSQGITLDE 795
+ + M+ GRL DS G + N I I+T++ D L ++ +G + DE
Sbjct: 614 NILLQIMDDGRLTDSKGNVVDFKNTIIIMTSNIASDLILNYVKEGKSFDE 663
>gi|384085053|ref|ZP_09996228.1| clpB protein [Acidithiobacillus thiooxidans ATCC 19377]
Length = 865
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 25/211 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +K+ E + ++L K + + L +V Q EA +AVA + + + G + RR
Sbjct: 551 PVSKMLEGEKEKLLK---------MEERLQARVVGQSEAVAAVANAIRRSRAGLSDPRRP 601
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS LF+GP VGK ++ AL+E + + +++ + E+ V R
Sbjct: 602 NGS-----FLFLGPTGVGKTELTKALAEFLFDSEDLLVRIDMSEFMEKHSV-ARLIGAPP 655
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ G EAV+R P+SV+LL+++++A V + + ++ GRL D GR + N
Sbjct: 656 GYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHADVFNVLLQVLDDGRLTDGQGRTVDFRN 715
Query: 771 VIFILTADWLPDSLKFLSQGITLDEKKLTSL 801
+ ++T++ D ++ S+ D ++ +
Sbjct: 716 TVIVMTSNLGSDRIQEFSRSGNYDAMRVAVM 746
>gi|417002233|ref|ZP_11941622.1| ATP-dependent chaperone protein ClpB [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325479374|gb|EGC82470.1| ATP-dependent chaperone protein ClpB [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 861
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 30/209 (14%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL ES+ ++ L + L ++V Q+EA AV+ + + + G + R
Sbjct: 547 PVNKLVESERSKIL---------HLPEKLHQRVIGQEEAIQAVSNAIIRARSGLKSQNRP 597
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A +L+E + M+ + E+ V
Sbjct: 598 IGS-----FIFLGPTGVGKTELAKSLTEAMFDDERNMVRIDMSEYMEKYSVSRLIGAAPG 652
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EAV+R P+SVIL ++I++A V + + ++ GRL DS GR + N
Sbjct: 653 YVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVDFKNT 712
Query: 772 IFILT----ADWLPDSLKFLSQGITLDEK 796
I I+T +++L D L++ T+DE+
Sbjct: 713 IIIMTSNIGSEYLIDG---LNEDGTIDEE 738
>gi|199598725|ref|ZP_03212139.1| Chaperone ClpB [Lactobacillus rhamnosus HN001]
gi|199590413|gb|EDY98505.1| Chaperone ClpB [Lactobacillus rhamnosus HN001]
Length = 868
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D L +L ++V Q EA +AV+ V + + G R GS LF+GP V
Sbjct: 557 DRQKLLHLAGNLHQRVIGQDEAVTAVSDAVLRSRAGLQDPSRPLGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRN 728
GK ++A AL+E + + M+ + E+ V A +G EAV+RN
Sbjct: 612 GKTELAKALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEQGGQLTEAVRRN 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++++LL++I++A+ V + + ++ GRL D GR + N I I+T++
Sbjct: 672 PYTIVLLDEIEKANPDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSN 721
>gi|257057942|ref|YP_003135830.1| AAA ATPase [Cyanothece sp. PCC 8802]
gi|256588108|gb|ACU98994.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 8802]
Length = 789
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E++++ S L L E + Q+EA AV+ V + ++G R
Sbjct: 456 PINKLSETESE---------SLLHLEAQLHESIIGQEEAVKAVSRAVRRARVGLKNPHRP 506
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
S +F GP VGK ++ AL+ + G+ MI L + EP +
Sbjct: 507 VAS-----FIFAGPTGVGKTELTKALARYLFGSEEAMIRL-DMSEFMEPHTVSKLIGSPP 560
Query: 714 ---GKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ EAV+R P+SVIL ++I++A + + + +E GRL D+ GR ++ N
Sbjct: 561 GFIGYEEGGQLTEAVRRKPYSVILFDEIEKAHPDIFNLLLQLLEDGRLTDAKGRTVNFNN 620
Query: 771 VIFILTAD 778
+ I+T++
Sbjct: 621 TLVIMTSN 628
>gi|456358085|dbj|BAM92530.1| chaperone [Agromonas oligotrophica S58]
Length = 879
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 29/220 (13%)
Query: 575 KVLESAPEKTHI-EPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKV 633
+++E A HI + V + G P +K+ E + D+L R+ SL ++V
Sbjct: 526 EMMEEAVTANHIAQVVSRWTGV-----PVDKMLEGEKDKLL---------RMEDSLGKRV 571
Query: 634 WWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGA 692
Q EA AVAT V + + G R GS +F+GP VGK ++ AL+E +
Sbjct: 572 VGQFEAVHAVATAVRRSRAGLQDPHRPMGS-----FMFLGPTGVGKTELTKALAEYLFND 626
Query: 693 SPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMV 744
M+ L E+ V G D+ G EAV+R P+ V+L ++I++A
Sbjct: 627 ETAMVRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPD 686
Query: 745 VRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
V + + ++ GRL D GR + N + I+T++ D L
Sbjct: 687 VFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSDFL 726
>gi|339485554|ref|YP_004700082.1| ATP-dependent chaperone ClpB [Pseudomonas putida S16]
gi|338836397|gb|AEJ11202.1| ATP-dependent chaperone ClpB [Pseudomonas putida S16]
Length = 831
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 32/233 (13%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +T+ L R+KV E+ E V + G P K+ E + ++L
Sbjct: 487 ERSLQMVDQHGKTENQLLRNKV----TEEEIAEVVSKWTGI-----PVAKMLEGEREKLL 537
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K + + L ++V Q EA +AVA V + + G + R +GS LF+GP
Sbjct: 538 K---------MEELLHQRVIGQNEAVTAVANAVRRSRAGLSDPNRPSGS-----FLFLGP 583
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAV 725
VGK ++ AL+E + M+ + E+ V R+ G ++ G EAV
Sbjct: 584 TGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAV 643
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SV+LL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 644 RRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 696
>gi|449439307|ref|XP_004137427.1| PREDICTED: chaperone protein ClpB1-like [Cucumis sativus]
gi|449486952|ref|XP_004157452.1| PREDICTED: chaperone protein ClpB1-like [Cucumis sativus]
Length = 908
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 25/188 (13%)
Query: 32 HGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALERLPTAQQNVS 91
H Q TPLH+A L++ PSG L QA S ++H + +E F AL++LP+ S
Sbjct: 26 HAQLTPLHLAVALVSDPSGILSQAIASSGGENAH----KEVETVFKRALKKLPSQ----S 77
Query: 92 PGLDP-PISNALMAALKRAQAHQR-RGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVM 149
P D P S L+ ++RAQA Q+ RG LAV +QL++ +L+D + ++
Sbjct: 78 PAPDEVPASTTLIKVIRRAQAAQKSRGDTH------LAV----DQLVLGLLEDSQIGDLL 127
Query: 150 REASFSSPAVKATIEQSLNSSCSVSNSSPIGLGFRPSSRNLYMNPRLQQAGG---VCGGQ 206
+EA ++ VK+ +E+ S+ F+ + Y ++QAG V G
Sbjct: 128 KEAGVTTAKVKSEVEKLRGKEGKKVESASGDTTFQ--ALKTYGRDLVEQAGKLDPVIGRD 185
Query: 207 SEPEMVVR 214
E VVR
Sbjct: 186 EEIRRVVR 193
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 14/176 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + L L ++V Q +A AVA V + + G G+ ++ GS LF+GP V
Sbjct: 555 DKERLVGLADRLHKRVVGQNQAVDAVAEAVLRSRAGLGRPQQPTGS-----FLFLGPTGV 609
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+E + +++ + E+ V G ++ EAV+R
Sbjct: 610 GKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRR 669
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
P+SVIL +++++A + V + + ++ GRL D GR + N + I+T++ + L
Sbjct: 670 PYSVILFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL 725
>gi|331092135|ref|ZP_08340965.1| hypothetical protein HMPREF9477_01608 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401907|gb|EGG81481.1| hypothetical protein HMPREF9477_01608 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 817
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL ES+ +LQK L K L ++V Q+EA AV V + ++G R
Sbjct: 488 PVQKLAESETARLQK---------LDKILHKRVIGQEEAVVAVTKAVKRGRVGLKDPNRP 538
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ L+E + G +I + E+ V G
Sbjct: 539 IGS-----FLFLGPTGVGKTELSKTLAEALFGNEEALIRVDMSEYMEKHSVSKMIGSPPG 593
Query: 715 KTALD---KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D ++ E V+RNP+SVIL ++I++A V + + ++ G + DS GR++ N
Sbjct: 594 YVGHDDGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFKNT 653
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 654 VIIMTSN 660
>gi|218244917|ref|YP_002370288.1| ATPase AAA [Cyanothece sp. PCC 8801]
gi|218165395|gb|ACK64132.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 8801]
Length = 789
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E++++ S L L E + Q+EA AV+ V + ++G R
Sbjct: 456 PINKLSETESE---------SLLHLEAQLHESIIGQEEAVKAVSRAVRRARVGLKNPHRP 506
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
S +F GP VGK ++ AL+ + G+ MI L + EP +
Sbjct: 507 VAS-----FIFAGPTGVGKTELTKALARYLFGSEEAMIRL-DMSEFMEPHTVSKLIGSPP 560
Query: 714 ---GKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ EAV+R P+SVIL ++I++A + + + +E GRL D+ GR ++ N
Sbjct: 561 GFIGYEEGGQLTEAVRRKPYSVILFDEIEKAHPDIFNLLLQLLEDGRLTDAKGRTVNFNN 620
Query: 771 VIFILTAD 778
+ I+T++
Sbjct: 621 TLVIMTSN 628
>gi|397171671|ref|ZP_10495070.1| ATP-dependent protease [Alishewanella aestuarii B11]
gi|396086679|gb|EJI84290.1| ATP-dependent protease [Alishewanella aestuarii B11]
Length = 859
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
D R+ ++L +KV Q EA SAVA + + + G + + GS LF+GP VGK
Sbjct: 557 DKLLRMEEALHDKVVGQHEAVSAVANAIRRSRAGLSDPNKPIGS-----FLFLGPTGVGK 611
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPF 730
++ AL++ + + M+ + E+ V R+ G ++ G EAV+R P+
Sbjct: 612 TELTKALAQFLFDSPDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPY 671
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
SVILL+++++A V + + ++ GRL D GR + N + I+T++ D ++
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNAVIIMTSNLGSDLIQ 726
>gi|384249092|gb|EIE22574.1| ClpB chaperone, Hsp100 family [Coccomyxa subellipsoidea C-169]
Length = 1022
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 14/168 (8%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGK 678
D L + L +V Q EA +AVA + + + G G R S +F+GP VGK
Sbjct: 700 DKLLHLDEELHRRVIGQDEAVNAVADAIQRSRAGMGDPNRPIAS-----FMFLGPTGVGK 754
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPF 730
++A AL+E + M+ L E+ V G ++ EAV+R P+
Sbjct: 755 TELAKALAEYLFNTDQAMVRLDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTEAVRRRPY 814
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+V+L +++++A V + + ++ GR+ DS GR +S N I I+T++
Sbjct: 815 AVVLFDEVEKAHADVFNILLQILDDGRVTDSQGRTVSFKNTILIMTSN 862
>gi|422324030|ref|ZP_16405067.1| ATP-dependent Clp protease ATP-binding subunit [Rothia mucilaginosa
M508]
gi|353344624|gb|EHB88930.1| ATP-dependent Clp protease ATP-binding subunit [Rothia mucilaginosa
M508]
Length = 855
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 591 DFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTV 647
D G ++ E L S + K + +S RLL + L ++V Q+ A +A++ +
Sbjct: 476 DAFGTVTPEVIAEVLAASTGVPVYKITEEES-TRLLTMEQELHKRVIGQEHAIAALSRAI 534
Query: 648 TQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
+ + G RR GS +F GP VGK ++A AL+E + G +I L +++
Sbjct: 535 RRTRAGLKDPRRPGGS-----FIFAGPTGVGKTELAKALAEFLFGDEDSLITL-DMSEYQ 588
Query: 707 EPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGR 757
E R G D+ G E V+R PFSV+L +++++A + ++ + +E GR
Sbjct: 589 EKHTVSRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHADLFNSLLQILEDGR 648
Query: 758 LVDSYGREISLGNVIFILTADW 779
L DS GR + N + I+T +
Sbjct: 649 LTDSQGRVVDFKNTVIIMTTNL 670
>gi|331701985|ref|YP_004398944.1| ATPase AAA-2 domain-containing protein [Lactobacillus buchneri NRRL
B-30929]
gi|329129328|gb|AEB73881.1| ATPase AAA-2 domain protein [Lactobacillus buchneri NRRL B-30929]
Length = 753
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
+ L +L + V Q EA VA + + ++G NG R GS LF+GP VGK +
Sbjct: 434 LRNLAPNLEKHVIGQNEAVEKVARAIRRNRVGFNGTGRPIGS-----FLFVGPTGVGKTE 488
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFS 731
MA L+ + G+ MI ++ EP + G ++ G E V+R+P+S
Sbjct: 489 MAKQLAYELFGSKDSMIRF-DMSEYMEPHSVAKLIGSPPGYVGYEEAGQLTEQVRRHPYS 547
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ILL+++++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 548 LILLDEVEKAHPDVLHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 594
>gi|421524703|ref|ZP_15971324.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida LS46]
gi|402751166|gb|EJX11679.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
putida LS46]
Length = 854
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 32/233 (13%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +T+ L R+KV E+ E V + G P K+ E + ++L
Sbjct: 510 ERSLQMVDQHGKTENQLLRNKV----TEEEIAEVVSKWTGI-----PVAKMLEGEREKLL 560
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K + + L ++V Q EA +AVA V + + G + R +GS LF+GP
Sbjct: 561 K---------MEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGS-----FLFLGP 606
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAV 725
VGK ++ AL+E + M+ + E+ V R+ G ++ G EAV
Sbjct: 607 TGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAV 666
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SV+LL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 667 RRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
>gi|375109099|ref|ZP_09755353.1| ATP-dependent protease [Alishewanella jeotgali KCTC 22429]
gi|374571285|gb|EHR42414.1| ATP-dependent protease [Alishewanella jeotgali KCTC 22429]
Length = 859
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
D R+ ++L +KV Q EA SAVA + + + G + + GS LF+GP VGK
Sbjct: 557 DKLLRMEEALHDKVVGQHEAVSAVANAIRRSRAGLSDPNKPIGS-----FLFLGPTGVGK 611
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPF 730
++ AL++ + + M+ + E+ V R+ G ++ G EAV+R P+
Sbjct: 612 TELTKALAQFLFDSPDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPY 671
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
SVILL+++++A V + + ++ GRL D GR + N + I+T++ D ++
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNAVIIMTSNLGSDLIQ 726
>gi|417973921|ref|ZP_12614753.1| hypothetical protein ANHS_1440 [Lactobacillus ruminis ATCC 25644]
gi|346329702|gb|EGX97989.1| hypothetical protein ANHS_1440 [Lactobacillus ruminis ATCC 25644]
Length = 574
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 22/179 (12%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L +L E+V Q EA AVA V + + G + GS +F+GP VGK ++A
Sbjct: 270 LADTLHERVIGQDEAVEAVADAVLRSRAGLQDPSKPLGS-----FMFLGPTGVGKTELAK 324
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRNPFSVILL 735
AL+E + + M+ + E+ V A +G EAV+RNP++++L
Sbjct: 325 ALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEEGGQLTEAVRRNPYTIVLF 384
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLD 794
++I++A V + + ++ GRL D GR + N I I+T++ L GI LD
Sbjct: 385 DEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTILIMTSN--------LGSGILLD 435
>gi|406027456|ref|YP_006726288.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactobacillus
buchneri CD034]
gi|405125945|gb|AFS00706.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactobacillus
buchneri CD034]
Length = 753
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
+ L +L + V Q EA VA + + ++G NG R GS LF+GP VGK +
Sbjct: 434 LRNLAPNLEKHVIGQNEAVEKVARAIRRNRVGFNGTGRPIGS-----FLFVGPTGVGKTE 488
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFS 731
MA L+ + G+ MI ++ EP + G ++ G E V+R+P+S
Sbjct: 489 MAKQLAYELFGSKDSMIRF-DMSEYMEPHSVAKLIGSPPGYVGYEEAGQLTEQVRRHPYS 547
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+ILL+++++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 548 LILLDEVEKAHPDVLHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 594
>gi|347521525|ref|YP_004779096.1| chaperone ClpB [Lactococcus garvieae ATCC 49156]
gi|385832909|ref|YP_005870684.1| chaperone ClpB [Lactococcus garvieae Lg2]
gi|343180093|dbj|BAK58432.1| chaperone ClpB [Lactococcus garvieae ATCC 49156]
gi|343182062|dbj|BAK60400.1| chaperone ClpB [Lactococcus garvieae Lg2]
Length = 867
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 31/233 (13%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
E+A+ L S ++D + S V ES E+ E V G P KL E + ++L
Sbjct: 512 EQALKELESKAKSDDL---SLVQESVTEEQIAEVVGRMTGI-----PVTKLVEGEREKLL 563
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
L ++L ++V Q EA AV+ + + + G R GS LF+GP
Sbjct: 564 ---------HLPETLHQRVVGQDEAVEAVSDAIIRARAGIQDPNRPLGS-----FLFLGP 609
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAV 725
VGK ++A AL+E + + M+ + E+ V R+ G D+ G EAV
Sbjct: 610 TGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKHSVSRLVGAPPGYVGYDEGGQLTEAV 669
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+RNP+++ILL++I++A V + + ++ GRL DS G + N + I+T++
Sbjct: 670 RRNPYTIILLDEIEKAHPDVFNILLQVLDDGRLTDSKGVLVDFKNTVLIMTSN 722
>gi|432334057|ref|ZP_19585778.1| ATP-dependent chaperone ClpB, partial [Rhodococcus wratislaviensis
IFP 2016]
gi|430779024|gb|ELB94226.1| ATP-dependent chaperone ClpB, partial [Rhodococcus wratislaviensis
IFP 2016]
Length = 869
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 28/204 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L E + ++L K L + L E+V Q EA VA V + + G RR
Sbjct: 549 PVARLQEGEREKLLK---------LDEILHERVVGQDEAVQLVADAVIRARSGIRDPRRP 599
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A L+ + + M+ L +++E R
Sbjct: 600 IGS-----FIFLGPTGVGKTELAKTLASALFDSEDNMVRL-DMSEYQERHTVSRLIGAPP 653
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+L ++I++A V + + ++ GR+ DS GR++ N
Sbjct: 654 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRN 713
Query: 771 VIFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L G+T D
Sbjct: 714 TVIIMTSNI---GSQHLLDGVTAD 734
>gi|300857273|ref|YP_003782257.1| ATPase [Clostridium ljungdahlii DSM 13528]
gi|300437388|gb|ADK17155.1| predicted ATPase with chaperone activity [Clostridium ljungdahlii
DSM 13528]
Length = 813
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++++L K L + L ++V Q EA +++ V + ++G +R
Sbjct: 490 PVEKLTEKESERLLK---------LEEILHKRVVGQDEAVKSISKAVRRARVGLKDPKRP 540
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS +F+GP VGK +++ AL+E + G MI + E+ V G
Sbjct: 541 IGS-----FIFLGPTGVGKTELSKALAEAMFGDENNMIRIDMSEYMEKHTVSRLIGSPPG 595
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+RNP+SV+L ++I++A V + + +E GRL D G+ I+ N
Sbjct: 596 YVGYDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTINFKNT 655
Query: 772 IFILTAD 778
I I+T++
Sbjct: 656 IIIMTSN 662
>gi|455647248|gb|EMF26230.1| Clp protease ATP binding subunit [Streptomyces gancidicus BKS
13-15]
Length = 844
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 30/212 (14%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P ++L E + D+L L + L ++V Q+EA V+ V + + G + R
Sbjct: 517 PVSRLTEEEKDRLLG---------LEQHLHQRVVGQEEAVRVVSDAVLRSRAGLSSPDRP 567
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + G+ M+ L E V
Sbjct: 568 IGS-----FLFLGPTGVGKTELARALAEALFGSEDRMVRLDMSEYQERHTVSRLVGAPPG 622
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R+P+S++LL+++++A V + + ++ GRL DS GR + N
Sbjct: 623 YVGHEEAGQLTEVVRRHPYSLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNS 682
Query: 772 IFILTADWLPD-------SLKFLSQGITLDEK 796
+ ++T++ D +L F + G DE+
Sbjct: 683 VIVMTSNLGSDVITRRGATLGFATGGAEADEE 714
>gi|398883912|ref|ZP_10638859.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM60]
gi|398195738|gb|EJM82767.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM60]
Length = 854
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 149/326 (45%), Gaps = 52/326 (15%)
Query: 476 KQKSQELQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQ---PFQPKV 532
K +SQ L+K+ ++ + + + HER + ++NS Q Q K+
Sbjct: 423 KVESQALKKESDEAAIKRLEKLQEEIVRHEREYS---DLEEIWNSEKAEVQGSAQIQQKI 479
Query: 533 QLNR----------NLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPE 582
+ +R +L +L ++ ER++ ++ +++ L RSKV E
Sbjct: 480 EQSRQELEAARRKGDLNRMAELQYGVIPD--LERSLQMVDQHGKSENQLLRSKV----TE 533
Query: 583 KTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASA 642
+ E V + G P +K+ E + D+L K + L ++V Q EA A
Sbjct: 534 EEIAEVVSKWTGI-----PVSKMLEGERDKLMK---------MEGLLHQRVIGQDEAVIA 579
Query: 643 VATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGP 701
V+ V + + G + R +GS +F+GP VGK ++ AL+E + M+ +
Sbjct: 580 VSNAVRRSRAGLSDPNRPSGS-----FMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDM 634
Query: 702 RRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRA 752
E+ V R G ++ G EAV+R P+SVILL+++++A V + +
Sbjct: 635 SEFMEKHSV-ARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQV 693
Query: 753 MERGRLVDSYGREISLGNVIFILTAD 778
+E GRL DS+GR + N + ++T++
Sbjct: 694 LEDGRLTDSHGRTVDFKNTVIVMTSN 719
>gi|156740924|ref|YP_001431053.1| ATPase [Roseiflexus castenholzii DSM 13941]
gi|156232252|gb|ABU57035.1| ATPase AAA-2 domain protein [Roseiflexus castenholzii DSM 13941]
Length = 871
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 15/191 (7%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L ++V Q EA SAVA V + + G R GS LF+GP VGK ++A AL+E
Sbjct: 569 LHQRVVGQDEAVSAVANAVRRARAGLQDPNRPLGS-----FLFLGPTGVGKTELARALAE 623
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ M+ + E+ V G ++ EAV+R P+SV+L ++++
Sbjct: 624 FLFDDEQAMVRIDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVE 683
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQ-GITLDEKKL 798
+A V + + ++ GRL D +GR ++ N + I+T++ +++ L+Q G + D +
Sbjct: 684 KAHPDVFNILLQILDDGRLTDGHGRVVNFKNTVIIMTSNIASPTIQELAQRGASQDIIRA 743
Query: 799 TSLASGEWQLR 809
+ + QLR
Sbjct: 744 SVMEELRTQLR 754
>gi|116495242|ref|YP_806976.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus casei ATCC 334]
gi|239632123|ref|ZP_04675154.1| ATP-binding subunit of Clp protease and DnaK+DnaJ chaperones
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|116105392|gb|ABJ70534.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus casei ATCC 334]
gi|239526588|gb|EEQ65589.1| ATP-binding subunit of Clp protease and DnaK+DnaJ chaperones
[Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 698
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 389 LKNLAGDLEKHVIGQNEAVDKVARAIRRNRIGFNKSGRPIGS-----FLFVGPTGVGKTE 443
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 444 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 503
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 504 ILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 549
>gi|297583006|ref|YP_003698786.1| ATPase AAA-2 domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297141463|gb|ADH98220.1| ATPase AAA-2 domain protein [Bacillus selenitireducens MLS10]
Length = 685
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 12/200 (6%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKM 681
K L L +KV Q+EA AVA + + + G +R G + LF G VGK ++
Sbjct: 407 LKHLADHLSQKVVGQKEAVEAVAKAIRRGRAGF-RREG---RPIASFLFHGQTGVGKTEL 462
Query: 682 ASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVI 733
AL+E + G M+ L E+ V G ++ E V+R P+++I
Sbjct: 463 TRALAEEMFGDREAMLRLDMSEFMEKHTVSKLIGSPPGYVGHEEAGQLTERVRRRPYTII 522
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITL 793
LL+++++A V+ + +E GRL DS+GR +S + + ++T + P F + +
Sbjct: 523 LLDEMEKAHPDVQHMFLQVLEDGRLTDSHGRTVSFKDTVIVMTTNAKPLDAYFKLEFMNR 582
Query: 794 DEKKLTSLASGEWQLRLSIR 813
++ + A GE +L +R
Sbjct: 583 IDRVIGFEALGEAELEQIVR 602
>gi|282896404|ref|ZP_06304425.1| ATPase [Raphidiopsis brookii D9]
gi|281198692|gb|EFA73572.1| ATPase [Raphidiopsis brookii D9]
Length = 890
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ +L K L L E+V Q+EA AV+ + + + G R
Sbjct: 559 PVNRLLESERQKLLK---------LEHHLHERVIGQEEAVLAVSAAIRRARAGMKDPSRP 609
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LFMGP VGK ++A AL++ + + ++ L E+ V
Sbjct: 610 IGS-----FLFMGPTGVGKTELARALAQFLFDSEDALVRLDMSEYMEKHSVSRLVGAPPG 664
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E ++R+P+SV+LL+++++A V + + ++ GR+ DS GR + N
Sbjct: 665 YVGYEEGGQLSETIRRHPYSVVLLDEVEKAHGDVFNILLQVLDDGRITDSQGRVVDFRNT 724
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 725 VIVMTSN 731
>gi|282899553|ref|ZP_06307517.1| ATPase [Cylindrospermopsis raciborskii CS-505]
gi|281195432|gb|EFA70365.1| ATPase [Cylindrospermopsis raciborskii CS-505]
Length = 891
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ +L K L L E+V Q+EA AV+ + + + G R
Sbjct: 559 PVNRLLESERQKLLK---------LEHHLHERVIGQEEAVLAVSAAIRRARAGMKDPSRP 609
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LFMGP VGK ++A AL++ + + ++ L E+ V
Sbjct: 610 IGS-----FLFMGPTGVGKTELARALAQFLFDSEDALVRLDMSEYMEKHSVSRLVGAPPG 664
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E ++R+P+SV+LL+++++A V + + ++ GR+ DS GR + N
Sbjct: 665 YVGYEEGGQLSETIRRHPYSVVLLDEVEKAHGDVFNILLQVLDDGRITDSQGRVVDFRNT 724
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 725 VIVMTSN 731
>gi|159481126|ref|XP_001698633.1| ClpD chaperone, Hsp100 family [Chlamydomonas reinhardtii]
gi|158282373|gb|EDP08126.1| ClpD chaperone, Hsp100 family [Chlamydomonas reinhardtii]
Length = 997
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 628 SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALS 686
+L V Q +A A++T + + + G N RR + LLF+GP VGK ++A LS
Sbjct: 599 TLASHVVGQADAVEAISTALCRARCGLNLPRRPVAA-----LLFVGPTGVGKTELAKVLS 653
Query: 687 ELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDI 738
E G+ ++ L E V G K+ EA++R PFSV+L ++I
Sbjct: 654 EQYYGSREALLRLDMSEYMERHSVSKLVGAPPGYVGFGDGGKLTEAIRRRPFSVVLFDEI 713
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++A V + + +E GRL DS GR +S N + ILT++
Sbjct: 714 EKAHPDVFSILLQILEDGRLTDSQGRVVSFKNAMIILTSN 753
>gi|453072930|ref|ZP_21975943.1| ATP-dependent chaperone ClpB [Rhodococcus qingshengii BKS 20-40]
gi|452756700|gb|EME15108.1| ATP-dependent chaperone ClpB [Rhodococcus qingshengii BKS 20-40]
Length = 877
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 28/204 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L E + ++L K L + L E+V Q EA VA V + + G RR
Sbjct: 557 PVARLQEGEREKLLK---------LDEILHERVVGQDEAVQLVADAVIRARSGIRDPRRP 607
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A L+ + + M+ L +++E R
Sbjct: 608 IGS-----FIFLGPTGVGKTELAKTLASALFDSEDNMVRL-DMSEYQERHTVSRLIGAPP 661
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+L ++I++A V + + ++ GR+ DS GR++ N
Sbjct: 662 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRN 721
Query: 771 VIFILTADWLPDSLKFLSQGITLD 794
+ I+T++ + L G+T D
Sbjct: 722 TVIIMTSNI---GSQHLLDGVTAD 742
>gi|440730877|ref|ZP_20910938.1| ATP-dependent clp protease subunit protein [Xanthomonas translucens
DAR61454]
gi|440376400|gb|ELQ13074.1| ATP-dependent clp protease subunit protein [Xanthomonas translucens
DAR61454]
Length = 897
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 23/197 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N++ E + D+L R+ L +V QQEA V+ V + + G + R
Sbjct: 583 PVNRMLEGERDKLL---------RMEDELHRRVVGQQEAIKVVSDAVRRSRAGLSDPNRP 633
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
+GS LF+GP VGK ++ AL+E + +S MI + E+ V G
Sbjct: 634 SGS-----FLFLGPTGVGKTELCKALAEFLFDSSEAMIRIDMSEFMEKHSVARLIGAPPG 688
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
++ G EAV+R P+S+ILL+++++A V + + ++ GRL D GR + N
Sbjct: 689 YVGYEEGGYLTEAVRRRPYSLILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNT 748
Query: 772 IFILTADWLPDSLKFLS 788
+ ++T++ ++ LS
Sbjct: 749 VIVMTSNLGSHQIQELS 765
>gi|403385695|ref|ZP_10927752.1| negative regulator of genetic competence clpC/mecB [Kurthia sp.
JC30]
Length = 820
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 16/168 (9%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L ++V Q EA A++ + + + G +R GS +F+GP VGK ++A AL+E
Sbjct: 509 LHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGS-----FIFLGPTGVGKTELARALAE 563
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDI 738
++ G MI + ++ E R G D+ G E V+R P+SV+LL++I
Sbjct: 564 VMFGDEDSMIRI-DMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEI 622
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKF 786
++A V + + ++ GRL DS GR + N + I+T++ ++LK+
Sbjct: 623 EKAHPDVFNILLQVLDDGRLTDSKGRVVDFRNTVVIMTSNIGAEALKY 670
>gi|297203464|ref|ZP_06920861.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
gi|297148417|gb|EDY60364.2| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
Length = 847
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 26/233 (11%)
Query: 571 LGRSKVLESAPEKTHIEPVKDFLGCISSE---PPQNKLHESQNDQLQKPLDPDSFKRLLK 627
+G + + A E H+E + + + S P + L E + D+L L +
Sbjct: 490 IGEATGGDEADEGQHLEVTGEAIAQVVSRLTGIPVSSLTEEEKDRLLG---------LER 540
Query: 628 SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALS 686
L E+V Q EA V+ V + + G R GS LF+GP VGK ++A AL+
Sbjct: 541 HLHERVVGQDEAVRVVSDAVLRSRAGLASPDRPIGS-----FLFLGPTGVGKTELARALA 595
Query: 687 ELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDI 738
E + G+ M+ L E V G ++ E V+R+P+S++LL+++
Sbjct: 596 ESLFGSEERMVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEVVRRHPYSLLLLDEV 655
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGI 791
++A V + + ++ GRL DS GR + N + ++T++ +++ GI
Sbjct: 656 EKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEAITRRGAGI 708
>gi|191638751|ref|YP_001987917.1| ATP-dependent clp protease ATP-binding protein [Lactobacillus casei
BL23]
gi|190713053|emb|CAQ67059.1| ATP-dependent clp protease ATP-binding subunit [Lactobacillus casei
BL23]
Length = 698
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L + V Q EA VA + + ++G N R GS LF+GP VGK +
Sbjct: 389 LKNLAGDLEKHVIGQNEAVDKVARAIRRNRIGFNKSGRPIGS-----FLFVGPTGVGKTE 443
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+A L++ + G+ MI E+ V G ++ E V+RNP+S+
Sbjct: 444 LAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSL 503
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL++I++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 504 ILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 549
>gi|134099924|ref|YP_001105585.1| Clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
gi|291008683|ref|ZP_06566656.1| Clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
gi|133912547|emb|CAM02660.1| clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
Length = 838
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 22/183 (12%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKK 680
+ L L +V Q +A A+A V + + G G R GS LF+GP VGK +
Sbjct: 524 LRNLEGELHRRVIGQDDAVRALARAVRRSRSGVGNANRPVGS-----FLFLGPTGVGKTE 578
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR------------VRGKTALDKIGEAVKRN 728
+A AL+E + G MI L D E + R G ++ EAV+R
Sbjct: 579 LAKALAETLFGDEDRMIRL----DMSEFQERHNAARLIGAPPGYVGYGEAGELTEAVRRR 634
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLS 788
P+SV+LL+++++A V + + +E GRL D GR + N + I+T++ + + S
Sbjct: 635 PYSVVLLDEVEKAHPDVFNTLLQVLEDGRLTDGQGRTVDFTNTVVIMTSNLGSEVISSKS 694
Query: 789 QGI 791
G+
Sbjct: 695 GGL 697
>gi|395447027|ref|YP_006387280.1| ATPase [Pseudomonas putida ND6]
gi|388561024|gb|AFK70165.1| ATPase [Pseudomonas putida ND6]
Length = 831
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 32/233 (13%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +T+ L R+KV E+ E V + G P K+ E + ++L
Sbjct: 487 ERSLQMVDQHGKTENQLLRNKV----TEEEIAEVVSKWTGI-----PVAKMLEGEREKLL 537
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K + + L ++V Q EA +AVA V + + G + R +GS LF+GP
Sbjct: 538 K---------MEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGS-----FLFLGP 583
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAV 725
VGK ++ AL+E + M+ + E+ V R+ G ++ G EAV
Sbjct: 584 TGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAV 643
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SV+LL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 644 RRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 696
>gi|283457250|ref|YP_003361820.1| ATPase [Rothia mucilaginosa DY-18]
gi|283133235|dbj|BAI64000.1| ATPase with chaperone activity, ATP-binding subunit [Rothia
mucilaginosa DY-18]
Length = 856
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 591 DFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLL---KSLMEKVWWQQEAASAVATTV 647
D G ++ E L S + K + +S RLL + L ++V Q+ A +A++ +
Sbjct: 476 DAFGTVTPEVIAEVLAASTGVPVYKITEEES-TRLLTMEQELHKRVIGQEHAIAALSRAI 534
Query: 648 TQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
+ + G RR GS +F GP VGK ++A AL+E + G +I L +++
Sbjct: 535 RRTRAGLKDPRRPGGS-----FIFAGPTGVGKTELAKALAEFLFGDEDSLITL-DMSEYQ 588
Query: 707 EPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGR 757
E R G D+ G E V+R PFSV+L +++++A + ++ + +E GR
Sbjct: 589 EKHTVSRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHADLFNSLLQILEDGR 648
Query: 758 LVDSYGREISLGNVIFILTADW 779
L DS GR + N + I+T +
Sbjct: 649 LTDSQGRVVDFKNTVIIMTTNL 670
>gi|184201561|ref|YP_001855768.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
gi|183581791|dbj|BAG30262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
Length = 872
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 24/202 (11%)
Query: 587 EPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATT 646
E + D L S+ P KL E ++ +L D L ++V Q EA A++ +
Sbjct: 485 EVISDVLSA-STGVPVYKLSEEESGRLLHMED---------ELHKRVIGQNEAIKALSRS 534
Query: 647 VTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDH 705
+ + + G RR GS +F GP VGK ++A AL+E + G +I L
Sbjct: 535 IRRTRAGLKDPRRPGGS-----FIFAGPTGVGKTELAKALAEFLFGDEDALITLDMSEYQ 589
Query: 706 EEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGR 757
E+ V G ++ E V+R PFSV+L +++++A + ++ + +E GR
Sbjct: 590 EKHTVSRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHQDLFNSLLQILEDGR 649
Query: 758 LVDSYGREISLGNVIFILTADW 779
L DS GR + N + I+T +
Sbjct: 650 LTDSQGRVVDFKNTVIIMTTNL 671
>gi|397693566|ref|YP_006531446.1| ATPase, partial [Pseudomonas putida DOT-T1E]
gi|397330296|gb|AFO46655.1| ATPase [Pseudomonas putida DOT-T1E]
Length = 386
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 32/233 (13%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +T+ L R+KV E+ E V + G P K+ E + ++L
Sbjct: 42 ERSLQMVDQHGKTENQLLRNKV----TEEEIAEVVSKWTGI-----PVAKMLEGEREKLL 92
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K + + L ++V Q EA +AVA V + + G + R +GS LF+GP
Sbjct: 93 K---------MEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGS-----FLFLGP 138
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAV 725
VGK ++ AL+E + M+ + E+ V G + EAV
Sbjct: 139 TGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAV 198
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SV+LL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 199 RRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 251
>gi|387790113|ref|YP_006255178.1| ATP-dependent chaperone ClpB [Solitalea canadensis DSM 3403]
gi|379652946|gb|AFD06002.1| ATP-dependent chaperone ClpB [Solitalea canadensis DSM 3403]
Length = 871
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 27/201 (13%)
Query: 590 KDFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTV 647
+D G +S + P KL ES+ +L D L ++V Q EA AVA +
Sbjct: 532 EDIAGVVSRWTGVPVTKLVESEKQKLLHLED---------ELHKRVAGQDEAIEAVADAI 582
Query: 648 TQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHE 706
+ + G K R GS +F+G VGK ++A AL+E++ M+ + +++
Sbjct: 583 RRSRAGLQDKNRPIGS-----FIFLGTTGVGKTELAKALAEILFNDEHNMVRI-DMSEYQ 636
Query: 707 EPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGR 757
E R G D+ G EAV+R+P+SVILL++I++A V + + ++ GR
Sbjct: 637 ERHAVSRLIGAPPGYVGYDEGGQLTEAVRRHPYSVILLDEIEKAHPDVFNILLQVLDDGR 696
Query: 758 LVDSYGREISLGNVIFILTAD 778
L D+ GR + N I I+T++
Sbjct: 697 LTDNKGRTVDFKNAIIIMTSN 717
>gi|257062871|ref|YP_003142543.1| ATP-dependent chaperone ClpB [Slackia heliotrinireducens DSM 20476]
gi|256790524|gb|ACV21194.1| ATP-dependent chaperone ClpB [Slackia heliotrinireducens DSM 20476]
Length = 891
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L E+V Q EA SAVA + + + G + R GS LF+GP VGK ++A AL+E
Sbjct: 571 LHERVVGQDEAVSAVAGAIRRNRAGLSDPDRPIGS-----FLFLGPTGVGKTELAKALAE 625
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDID 739
+ M+ + E+ V+ G D+ G EAV+R P++VILL++I+
Sbjct: 626 YLFDTERAMVRIDMSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRRPYTVILLDEIE 685
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+A V + + ++ GRL D GR ++ N I I+T++ S++
Sbjct: 686 KAHPDVFNILLQVLDDGRLTDGQGRVVNFKNAIIIMTSNVGSQSIR 731
>gi|398876531|ref|ZP_10631686.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM67]
gi|398204297|gb|EJM91101.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM67]
Length = 854
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 150/325 (46%), Gaps = 50/325 (15%)
Query: 476 KQKSQELQKKWNDTCLNQHPNFHPSSLGHERIVPVPLSMTGLYNSNLLARQ---PFQPKV 532
K +SQ L+K+ ++ + + + HER + ++NS Q Q K+
Sbjct: 423 KVESQALKKESDEAAIKRLEKLQEEIVRHEREYS---DLEEIWNSEKAEVQGSAQIQQKI 479
Query: 533 QLNR----------NLGDTLQLNSNMVSSQPAERAVSPLNSPVRTDLVLGRSKVLESAPE 582
+ +R +L +L ++ ER++ ++ +++ L RSKV E
Sbjct: 480 EQSRQELEAARRKGDLNRMAELQYGVIPD--LERSLQMVDQHGKSENQLLRSKV----TE 533
Query: 583 KTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASA 642
+ E V + G P +K+ E + D+L K + L ++V Q EA A
Sbjct: 534 EEIAEVVSKWTGI-----PVSKMLEGERDKLMK---------MEGLLHQRVIGQDEAVIA 579
Query: 643 VATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGP 701
V+ V + + G + R +GS +F+GP VGK ++ AL+E + M+ +
Sbjct: 580 VSNAVRRSRAGLSDPNRPSGS-----FMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDM 634
Query: 702 RRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAM 753
E+ V R+ G ++ G EAV+R P+SVILL+++++A V + + +
Sbjct: 635 SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL 694
Query: 754 ERGRLVDSYGREISLGNVIFILTAD 778
E GRL DS+GR + N + ++T++
Sbjct: 695 EDGRLTDSHGRTVDFKNTVIVMTSN 719
>gi|374334801|ref|YP_005091488.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanimonas
sp. GK1]
gi|372984488|gb|AEY00738.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanimonas
sp. GK1]
Length = 857
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ SL E+V Q EA AVA + + + G + R GS LFMGP VGK ++
Sbjct: 561 RMEDSLHEQVIGQNEAVDAVANAIRRSRAGLSDPNRPVGS-----FLFMGPTGVGKTELC 615
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVIL 734
AL++ + + M+ + E+ V R+ G ++ G EAV+R P+SVIL
Sbjct: 616 KALADFLFDSRDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVIL 675
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLD 794
L+++++A V + + ++ GRL D GR + N + I+T++ D ++ S D
Sbjct: 676 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNIGSDLIQEHSASKDYD 735
Query: 795 EKK 797
+ K
Sbjct: 736 QMK 738
>gi|334136731|ref|ZP_08510188.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF7]
gi|333605752|gb|EGL17109.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF7]
Length = 815
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 95/184 (51%), Gaps = 19/184 (10%)
Query: 615 KPLDPDSFKRLLKS---LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLF 670
+ L + +RLLK L +V Q+EA AV+ + + + G +R GS +F
Sbjct: 489 RKLAEEETERLLKMEDILHNRVIGQEEAVKAVSRAIRRARAGLKDPKRPMGS-----FIF 543
Query: 671 MGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG-- 722
+GP VGK ++A AL+E + G +I + ++ E R G ++ G
Sbjct: 544 LGPTGVGKTELARALAESLFGDENAVIRI-DMSEYMEKHSTSRLVGAPPGYVGYEEGGQL 602
Query: 723 -EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLP 781
E V+R P+SV+LL++I++A V + + +E GRL DS GR + N + I+T++
Sbjct: 603 TEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGA 662
Query: 782 DSLK 785
D++K
Sbjct: 663 DTIK 666
>gi|417004252|ref|ZP_11942985.1| hypothetical protein FSLSAGS3026_00943 [Streptococcus agalactiae
FSL S3-026]
gi|417006262|ref|ZP_11944832.1| hypothetical protein FSLSAGS3026_10750 [Streptococcus agalactiae
FSL S3-026]
gi|341576443|gb|EGS26854.1| hypothetical protein FSLSAGS3026_10750 [Streptococcus agalactiae
FSL S3-026]
gi|341578051|gb|EGS28448.1| hypothetical protein FSLSAGS3026_00943 [Streptococcus agalactiae
FSL S3-026]
Length = 614
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 21/168 (12%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKK 679
D FK + LM++V Q++A AV VT + G S LF+GP VGK
Sbjct: 287 DGFK---EKLMDRVKGQEDAIEAVVDAVTIAQAGLQDENKPISS----FLFLGPTGVGKT 339
Query: 680 KMASALSELVSGASPIMI--PLGPRRDHEEP-------EVRVRGKTALDKIGEAVKRNPF 730
++A A++E + MI + + E+ E R +G+ + E +KR P+
Sbjct: 340 ELAKAIAEALFDDENAMIRFDMSEYKQKEDVTKLIGNRETRTKGQ-----LTEGIKRKPY 394
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
SV+LL+++++A V + ++ GRL DS GR IS N I I+T +
Sbjct: 395 SVLLLDEVEKAHSEVMDLFLQVLDDGRLTDSSGRLISFKNTIVIMTTN 442
>gi|297622426|ref|YP_003703860.1| ATP-dependent chaperone ClpB [Truepera radiovictrix DSM 17093]
gi|297163606|gb|ADI13317.1| ATP-dependent chaperone ClpB [Truepera radiovictrix DSM 17093]
Length = 862
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P ++L ES+ ++L RL L ++V Q EA +AVA + + + G + R
Sbjct: 543 PLSRLLESEREKLL---------RLEAELHKRVVGQDEALTAVADAIRRARAGLSDPNRP 593
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK + A AL+EL+ +I L ++ E R
Sbjct: 594 IGS-----FIFLGPTGVGKTETAKALAELLFDTEENLIRL-DMSEYMERHATARLIGAPP 647
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EAV+R P+SV+L ++I++A V + + ++ GRL DS GR + N
Sbjct: 648 GYIGYDEGGQLTEAVRRRPYSVLLFDEIEKAHPDVFNTLLQLLDDGRLTDSQGRTVDFRN 707
Query: 771 VIFILTAD 778
+ I+T++
Sbjct: 708 TVVIMTSN 715
>gi|340812276|gb|AEK76075.1| Hsp101 [Saccharum hybrid cultivar SP80-3280]
Length = 912
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 14/176 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + L L ++V Q EA +AVA V + K G G+ ++ GS LF+GP V
Sbjct: 557 DKERLVGLADRLHQRVVGQTEAVNAVAEAVLRSKAGLGRPQQSTGS-----FLFLGPTGV 611
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A A +E + +++ + E+ V G ++ E V+R
Sbjct: 612 GKTELAKAFAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTEQVRRR 671
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
P+SVIL +++++A + V + + ++ GRL D GR + N + I+T++ + L
Sbjct: 672 PYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL 727
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 23/193 (11%)
Query: 27 ASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALERLPTA 86
AS H Q TPLH+AA L+A G LRQA + + + E S AL++LP+
Sbjct: 21 ASEAGHAQLTPLHLAAALVADKGGILRQAI--TGASGGDGAAGDSFERVLSKALKKLPSQ 78
Query: 87 QQNVSPGLDP-PISNALMAALKRAQ-AHQRRGCPEQQQQPLLAVKVELEQLIISILDDPS 144
SP D P S AL+ A++RAQ A ++RG LAV +QL++ +L+D
Sbjct: 79 ----SPPPDSVPASTALIKAIRRAQSAQKKRGDSH------LAV----DQLLLGLLEDSQ 124
Query: 145 VSRVMREASFSSPAVKATIEQSLNSSCSVSNSSPIGLGFRPSSRNLYMNPRLQQAGG--- 201
+S ++EA S+ V+A +E+ S+ F+ + Y ++QAG
Sbjct: 125 ISDCLKEAGVSAARVRAELEKLRGGGGRRVESASGDTNFQ--ALKTYGRDLVEQAGKLDP 182
Query: 202 VCGGQSEPEMVVR 214
V G E VVR
Sbjct: 183 VIGRDEEIRRVVR 195
>gi|257865866|ref|ZP_05645519.1| UvrB/UvrC protein/AAA ATPase [Enterococcus casseliflavus EC30]
gi|257872200|ref|ZP_05651853.1| UvrB/UvrC protein/AAA ATPase [Enterococcus casseliflavus EC10]
gi|257799800|gb|EEV28852.1| UvrB/UvrC protein/AAA ATPase [Enterococcus casseliflavus EC30]
gi|257806364|gb|EEV35186.1| UvrB/UvrC protein/AAA ATPase [Enterococcus casseliflavus EC10]
Length = 754
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR-RG 659
P +L E + QL K L L KV Q EA VA + + ++G GK+ R
Sbjct: 420 PVGELKEKEQTQL---------KNLADDLKAKVIGQDEAIDKVAKAIRRNRVGLGKQNRP 470
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A L+ + G+ MI E+ V
Sbjct: 471 IGS-----FLFVGPTGVGKTELAKQLAYEMFGSEESMIRFDMSEYMEKHSVSKLIGSPPG 525
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+S+ILL+++++A V + ++ GRL D+ GR +S +
Sbjct: 526 YVGYEEAGQLTEKVRRNPYSLILLDEVEKAHPDVLHMFLQILDDGRLTDAQGRTVSFKDT 585
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 586 LIIMTSN 592
>gi|89100727|ref|ZP_01173582.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
gi|89084544|gb|EAR63690.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
Length = 817
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 16/167 (9%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +V Q+EA A++ V + + G +R GS +F+GP VGK ++A AL+E
Sbjct: 506 LHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGS-----FVFLGPTGVGKTELARALAE 560
Query: 688 LVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVILLEDI 738
+ G MI + ++ E R G ++ G E V+R P+SV+LL++I
Sbjct: 561 AMFGDEDAMIRI-DMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEI 619
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
++A V + + +E GRL DS GR + N + I+T++ ++LK
Sbjct: 620 EKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEALK 666
>gi|242624367|ref|YP_003002285.1| ATP-dependent clp protease ATP-binding subunit [Aureoumbra
lagunensis]
gi|239997475|gb|ACS36997.1| ATP-dependent clp protease ATP-binding subunit [Aureoumbra
lagunensis]
Length = 833
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 34/264 (12%)
Query: 534 LNRNLGDTLQLNSNMVSSQPAERAVSPLNSPV--RTDL--VLGRSKVLESAPEKTHIEPV 589
L+R L D ++ ++ Q E A + L+ + R L +L + K ++PV
Sbjct: 418 LDRELRDIIKEKDTAIADQNFEVAATALDRELELRAQLSAILATVDRIPGPAIKKMVDPV 477
Query: 590 ---KDFLGCIS--SEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVA 644
D +S + P NK+ +S++++L + ++L ++ Q++A SAV+
Sbjct: 478 VTEDDIANVVSAWTGIPVNKISKSESEKLL---------HMEETLHSRIIGQEQAVSAVS 528
Query: 645 TTVTQCKLG--NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPR 702
+ + ++G N R A LF GP VGK ++ AL+ GA M+ L
Sbjct: 529 RAIRRARVGLRNPNRPIAS------FLFSGPTGVGKTELTKALALYFFGAEDAMVRLDMS 582
Query: 703 RDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAME 754
E V G + ++ EAV+R P++V+L +++++A V + + +E
Sbjct: 583 EFMERHTVAKLIGSPPGYVGYSEGGQLTEAVRRKPYTVVLFDEVEKAHPDVFNLLLQILE 642
Query: 755 RGRLVDSYGREISLGNVIFILTAD 778
GRL DS GR I N + ILT++
Sbjct: 643 DGRLTDSKGRTIDFKNTMLILTSN 666
>gi|414587487|tpg|DAA38058.1| TPA: hypothetical protein ZEAMMB73_793135 [Zea mays]
Length = 896
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 19/172 (11%)
Query: 620 DSFKRLLK---SLMEKVWWQQEAASAVATTVTQCKLG--NGKRRGAGSKGDMWLLFMGPD 674
D RLLK +L ++ Q EA A++ + + ++G N R A +F GP
Sbjct: 566 DESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIAS------FIFSGPT 619
Query: 675 RVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVK 726
VGK ++A AL+ G+ MI L E V G T ++ EAV+
Sbjct: 620 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 679
Query: 727 RNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
R P++V+L ++I++A V + + +E GRL DS GR + N + I+T++
Sbjct: 680 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 731
>gi|425736428|ref|ZP_18854733.1| ATPase [Brevibacterium casei S18]
gi|425478261|gb|EKU45459.1| ATPase [Brevibacterium casei S18]
Length = 845
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L +++ Q +A +++ + + + G +R +GS +F GP VGK ++A
Sbjct: 505 RMEDELHKRIIGQNDAVKSISRAIRRTRAGLKDPKRPSGS-----FIFAGPTGVGKTELA 559
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
AL+E + G +I L E+ V G ++ E V+R PFSV+L
Sbjct: 560 KALAEFLFGDEDSLISLDMSEYSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVL 619
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
+++++A + ++ + +E GRL DS GRE+ N I I+T +
Sbjct: 620 FDEVEKAHSDIFNSLLQILEDGRLTDSQGREVDFKNTIIIMTTNL 664
>gi|78271907|dbj|BAE47139.1| ClpB [Tetragenococcus halophilus]
Length = 872
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 14/163 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L ++L ++V Q EA +AV+ V + + G R GS LF+GP VGK ++A
Sbjct: 569 LNETLHKRVIGQDEAVNAVSDAVIRSRAGLQNPDRPLGS-----FLFLGPTGVGKTELAK 623
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
AL+E + + M+ + E+ V G ++ EAV+RNP+++ILL
Sbjct: 624 ALAENLFDSEDHMVRIDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTEAVRRNPYTIILL 683
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + ++ GRL DS GR ++ N + I+T++
Sbjct: 684 DEIEKAHPDVFNILLQVLDDGRLTDSKGRVVNFKNTVLIMTSN 726
>gi|406039852|ref|ZP_11047207.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter ursingii DSM
16037 = CIP 107286]
Length = 859
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L +V Q EA AV+ V + + G + R +GS LF+GP VGK ++ AL+
Sbjct: 564 LHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGS-----FLFLGPTGVGKTELTKALAN 618
Query: 688 LVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVILLEDID 739
+ + MI + E+ V R+ G ++ G EAV+R P+SV+L ++++
Sbjct: 619 FLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVE 678
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLT 799
+A V + + ++ GRL DS GR I N + ++T++ ++ L +G T DE +
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGATDDEVRAV 738
Query: 800 SLASGEWQLR 809
+++ R
Sbjct: 739 VMSAVSQHFR 748
>gi|329929240|ref|ZP_08282999.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF5]
gi|328936799|gb|EGG33238.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF5]
Length = 818
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E + ++L L + L +V Q+EA AV+ V + + G +R
Sbjct: 487 PVNKLKEEETERLLN---------LEEILHSRVIGQEEAVKAVSRAVRRARAGLKDPKRP 537
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A AL+E + G ++ + ++ E R
Sbjct: 538 MGS-----FIFLGPTGVGKTELARALAEAMFGDENAVVRI-DMSEYMEKHSTSRLVGAPP 591
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ G E V+R P+SV+LL++I++A V + + +E GRL DS GR + N
Sbjct: 592 GYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRN 651
Query: 771 VIFILTADWLPDSLK 785
+ ILT++ +++K
Sbjct: 652 TLIILTSNVGAEAIK 666
>gi|206890329|ref|YP_002249718.1| chaperone ClpB 1 [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742267|gb|ACI21324.1| chaperone ClpB 1 [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 876
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 28/216 (12%)
Query: 572 GRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLME 631
GR + E E+ E V + G P +L ES+ +L K + + L E
Sbjct: 528 GRQMLKEEVDEEDIAEVVAKWTGI-----PVKRLLESETQKLIK---------MEERLKE 573
Query: 632 KVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVS 690
+V Q EA AV+ + + + G R GS +F+GP VGK ++A AL+E +
Sbjct: 574 RVVGQDEAIIAVSNAIRRARAGLQDPNRPIGS-----FMFLGPTGVGKTELAKALAEFLF 628
Query: 691 GASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEAD 742
MI + E V G ++ EAV+R P+SV+L ++I++A
Sbjct: 629 DDENAMIRIDMSEYQERHTVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIEKAH 688
Query: 743 MVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V + + ++ GRL D +GR + N I I+T++
Sbjct: 689 QEVFNILLQILDDGRLTDGHGRTVDFRNTIIIMTSN 724
>gi|189461350|ref|ZP_03010135.1| hypothetical protein BACCOP_02005 [Bacteroides coprocola DSM 17136]
gi|189431879|gb|EDV00864.1| ATPase family associated with various cellular activities (AAA)
[Bacteroides coprocola DSM 17136]
Length = 846
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 24/224 (10%)
Query: 577 LESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQ 636
L+ E E + D + IS P Q ++ +++ +L K + + L+ KV Q
Sbjct: 500 LKENRETVDKEQIADVVSMISGIPVQ-RMAQAEGIRL---------KGMKEQLLAKVIAQ 549
Query: 637 QEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPI 695
+A + + + ++G + G+ LF+GP VGK +A L++ + G++
Sbjct: 550 DKAVDTLVKAIQRSRVGLKDPNKPIGT-----FLFLGPTGVGKTHLAKELAKQMFGSADA 604
Query: 696 MIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRG 747
+I + E+ V G ++ E V+R P+S++LL++I++A V
Sbjct: 605 LIRIDMSEYMEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIVLLDEIEKAHSDVFN 664
Query: 748 NIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGI 791
+ + M+ GRL DSYGR + N + I+T++ LK +GI
Sbjct: 665 LLLQVMDEGRLTDSYGRTVDFKNTVIIMTSNIGTRQLKEFGKGI 708
>gi|298490462|ref|YP_003720639.1| ATP-dependent chaperone ClpB ['Nostoc azollae' 0708]
gi|298232380|gb|ADI63516.1| ATP-dependent chaperone ClpB ['Nostoc azollae' 0708]
Length = 894
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N+L ES+ QK L +S+ L E+V Q+E SAV+ + + + G R
Sbjct: 561 PVNRLLESER---QKLLKLESY------LHERVIGQEEGVSAVSAAIRRARAGMKDPSRP 611
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LFMGP VGK ++A AL++ + + ++ L E+ V
Sbjct: 612 IGS-----FLFMGPTGVGKTELARALAQFLFDSDDALLRLDMSEYMEKHSVSRLVGAPPG 666
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EA++R+P+SV+LL+++++A V + + ++ G + DS GR + N
Sbjct: 667 YIGYEEGGQLSEAIRRHPYSVVLLDEVEKAHPDVFNILLQVLDNGSITDSQGRGVDFRNT 726
Query: 772 IFILTAD 778
+ ++T++
Sbjct: 727 VIVMTSN 733
>gi|295395582|ref|ZP_06805776.1| ATP-dependent protease, ATPase subunit [Brevibacterium mcbrellneri
ATCC 49030]
gi|294971601|gb|EFG47482.1| ATP-dependent protease, ATPase subunit [Brevibacterium mcbrellneri
ATCC 49030]
Length = 870
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L +++ Q +A +V+ + + + G +R +GS +F GP VGK ++A
Sbjct: 505 RMEDELHKRIIGQNDAIKSVSRAIRRTRAGLKDPKRPSGS-----FIFAGPTGVGKTELA 559
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
AL+E + G +I L E+ V G ++ E V+R PFS++L
Sbjct: 560 KALAEFLFGDESALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRRPFSIVL 619
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
+++++A + ++ + +E GRL DS GRE+ N I I+T +
Sbjct: 620 FDEVEKAHADIFNSLLQILEDGRLTDSQGREVDFKNTIIIMTTNL 664
>gi|257875493|ref|ZP_05655146.1| UvrB/UvrC protein/AAA ATPase [Enterococcus casseliflavus EC20]
gi|257809659|gb|EEV38479.1| UvrB/UvrC protein/AAA ATPase [Enterococcus casseliflavus EC20]
Length = 754
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKR-RG 659
P +L E + QL K L L KV Q EA VA + + ++G GK+ R
Sbjct: 420 PVGELKEKEQTQL---------KNLADDLKAKVIGQDEAIDKVAKAIRRNRVGLGKQNRP 470
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A L+ + G+ MI E+ V
Sbjct: 471 IGS-----FLFVGPTGVGKTELAKQLAYEMFGSEESMIRFDMSEYMEKHSVSKLIGSPPG 525
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+S+ILL+++++A V + ++ GRL D+ GR +S +
Sbjct: 526 YVGYEEAGQLTEKVRRNPYSLILLDEVEKAHPDVLHMFLQILDDGRLTDAQGRTVSFKDT 585
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 586 LIIMTSN 592
>gi|294632198|ref|ZP_06710758.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. e14]
gi|292835531|gb|EFF93880.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. e14]
Length = 856
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L + L E+V Q EA S VA V + + G R GS LF+GP VGK ++A
Sbjct: 533 LEEHLHERVVGQDEAVSVVAEAVLRSRAGLASPDRPIGS-----FLFLGPTGVGKTELAR 587
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
AL+E + G+ M+ L E V G ++ E V+R+P+S++LL
Sbjct: 588 ALAEALFGSEERMVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEVVRRHPYSLLLL 647
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
+++++A V + + ++ GRL DS GR + N + ++T++
Sbjct: 648 DEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNL 691
>gi|451936301|ref|YP_007460155.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777224|gb|AGF48199.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 861
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 88/160 (55%), Gaps = 14/160 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L ++ Q EA AV+ + + + G + + R +GS LF+GP VGK ++A AL++
Sbjct: 569 LNSRIIGQSEAVRAVSDAILRARAGLSDQSRPSGS-----FLFLGPTGVGKTELAKALAD 623
Query: 688 LVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVILLEDID 739
+ + MI + E+ V R+ G ++ G EAV+R P+SV+LL++++
Sbjct: 624 FMFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVE 683
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
+A + V + + ++ GRL DS+GR + N + I+T++
Sbjct: 684 KAHLDVFNVLLQVLDDGRLTDSHGRTVDFRNTVIIMTSNL 723
>gi|403511395|ref|YP_006643033.1| sigma-54 interaction domain protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402800569|gb|AFR07979.1| sigma-54 interaction domain protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 827
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 22/173 (12%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGK 678
D L + L ++V Q EA +AV+ + + + G G R GS LF+GP VGK
Sbjct: 519 DRLVNLEEVLHDRVIGQDEAVTAVSEAIRRNRAGLGDPDRPVGS-----FLFLGPTGVGK 573
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVR------------VRGKTALDKIGEAVK 726
++A AL+E + G+ M+ R D E + R G ++ EAV+
Sbjct: 574 TELARALAEALFGSEDSMV----RLDMSEFQERHTASRLTGAPPGFVGYEEAGQLTEAVR 629
Query: 727 RNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
R+P+SV+LL++I++A V + + ++ GRL D GR + N + I+T++
Sbjct: 630 RHPYSVLLLDEIEKAHPDVFNLLLQLLDDGRLTDGQGRTVDFRNTVVIMTSNL 682
>gi|339626578|ref|YP_004718221.1| class III stress response-related ATPase [Sulfobacillus acidophilus
TPY]
gi|379006033|ref|YP_005255484.1| ATPase AAA-2 domain-containing protein [Sulfobacillus acidophilus
DSM 10332]
gi|339284367|gb|AEJ38478.1| class III stress response-related ATPase [Sulfobacillus acidophilus
TPY]
gi|361052295|gb|AEW03812.1| ATPase AAA-2 domain protein [Sulfobacillus acidophilus DSM 10332]
Length = 823
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 632 KVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVS 690
+V Q+EA AV+ + + + G RR GS LF+GP VGK ++A AL++ +
Sbjct: 511 RVVGQEEAVRAVSRAIRRARAGLKNPRRPIGS-----FLFLGPTGVGKSELAKALAQALF 565
Query: 691 GASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEAD 742
G MI + E V G ++ EAV+R+P+SV+LL++I++A
Sbjct: 566 GDEDAMITIDMSEYMERHAVSRLVGAPPGYVGYEEGGQLTEAVRRHPYSVVLLDEIEKAH 625
Query: 743 MVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
V + + +E GRL ++ GR + N + I+T++ + +K
Sbjct: 626 PEVFNILLQVLEEGRLTEAKGRAVDFRNTVIIMTSNVGAEVIK 668
>gi|311030020|ref|ZP_07708110.1| ATPase AAA-2 domain protein [Bacillus sp. m3-13]
Length = 710
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L +L +KV Q+EA + + + + + G K R G+ LF+GP VGK +
Sbjct: 411 LKNLATNLNQKVIGQEEAVNKITKAIRRSRAGLKRKERPIGA-----FLFVGPTGVGKTE 465
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSV 732
+ +L+E + G I E+ V G ++ E V+RNP+S+
Sbjct: 466 LTKSLAEELFGTKDAYIRFDMSEYMEKHAVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSI 525
Query: 733 ILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
ILL+++++A V + ME GRL DS GR +S + + I+T++
Sbjct: 526 ILLDEMEKAHPDVLHLFLQVMEDGRLTDSQGRTVSFKDTVIIMTSN 571
>gi|255659404|ref|ZP_05404813.1| negative regulator of genetic competence ClpC/MecB [Mitsuokella
multacida DSM 20544]
gi|260848366|gb|EEX68373.1| negative regulator of genetic competence ClpC/MecB [Mitsuokella
multacida DSM 20544]
Length = 840
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ D + K L +V QQEA AV+ + + + G +R GS LF+GP V
Sbjct: 501 ESDRLLHMEKILTRRVVGQQEAVEAVSKAIRRARAGLKDPKRPIGS-----FLFLGPTGV 555
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A ALSE + G +I E+ V G ++ +AV+R
Sbjct: 556 GKTELAKALSEALFGTEDAIIRFDMSEYMEKYAVSRMVGAPPGYVGYEEGGQLTDAVRRK 615
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+S+ILL++I++A V + + ++ GRL D GR + N + I+T++
Sbjct: 616 PYSIILLDEIEKAHPDVFNVLLQVLDDGRLTDGKGRTVDFRNTVIIMTSN 665
>gi|333394968|ref|ZP_08476787.1| chaperone ClpB, partial [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 860
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 628 SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALS 686
SL ++V Q +A +AV V + + G R GS LF+GP VGK ++A AL+
Sbjct: 566 SLHQRVVGQDQAVTAVTDAVLRSRAGLQDPNRPLGS-----FLFLGPTGVGKTELAKALA 620
Query: 687 ELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRNPFSVILLEDI 738
E + + M+ + E+ V A +G EAV+RNP+S++LL+++
Sbjct: 621 ENLFDSESHMVRIDMSEYMEKSSVSRLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLLDEV 680
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++A V + + ++ GRL D GR + N I I+T++
Sbjct: 681 EKAHSDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSN 720
>gi|257068481|ref|YP_003154736.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
gi|256559299|gb|ACU85146.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
Length = 879
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 627 KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASAL 685
+ L ++V Q EA A++ + + + G +R GS +F GP VGK ++A AL
Sbjct: 508 QELHKRVIGQDEAIKAISRAIRRTRAGLKDPKRPGGS-----FIFAGPTGVGKTELAKAL 562
Query: 686 SELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVILLE 736
+E + G +I L + E R G D+ G E V+R PFSV+L +
Sbjct: 563 AEFLFGDEESLIQL-DMSEFGEKHTASRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFD 621
Query: 737 DIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW-LPDSLKFLSQGIT 792
++++A + + ++ + +E GRL DS GR + N I I+T + D K +S G T
Sbjct: 622 EVEKAHVDIFNSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNLGTRDIAKGVSIGFT 678
>gi|184155864|ref|YP_001844204.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
fermentum IFO 3956]
gi|183227208|dbj|BAG27724.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
fermentum IFO 3956]
Length = 748
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 23/179 (12%)
Query: 613 LQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFM 671
LQK + + K L K L + V Q EA +A + + ++G N R GS LF+
Sbjct: 423 LQKQ-EQNQLKNLDKQLEDHVIGQNEAVDKIARAIRRNRIGLNKSGRPIGS-----FLFV 476
Query: 672 GPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIG 722
GP VGK + A LS+L+ G+ MI R D E + G ++ G
Sbjct: 477 GPTGVGKTETAKQLSKLLFGSKDAMI----RFDMSEYMDKTSTSKLIGAAPGYVGYEEAG 532
Query: 723 ---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
E V+R+P+S+ILL+++++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 533 QLTEQVRRHPYSLILLDEVEKAHPDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 591
>gi|422649153|ref|ZP_16712263.1| clpB protein [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330962677|gb|EGH62937.1| clpB protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 854
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 14/169 (8%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
D R+ L ++V Q+EA AV+ V + + G + R +GS +F+GP VGK
Sbjct: 557 DKLLRMETLLHKRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGS-----FMFLGPTGVGK 611
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPF 730
++ AL+E + M+ + E+ V R+ G ++ G EAV+R P+
Sbjct: 612 TELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPY 671
Query: 731 SVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
SVILL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL 720
>gi|218134185|ref|ZP_03462989.1| hypothetical protein BACPEC_02075 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991560|gb|EEC57566.1| ATPase family associated with various cellular activities (AAA)
[[Bacteroides] pectinophilus ATCC 43243]
Length = 819
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 26/216 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL +++++L K L ++L +V Q EA +AVA + + ++G +R
Sbjct: 493 PVQKLAVAESERLMK---------LEETLHARVVGQDEAVTAVARAIRRGRVGLKDPKRP 543
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ AL++ + G+ +I + E+ V G
Sbjct: 544 IGS-----FLFLGPTGVGKTELSKALADAMFGSESALIRVDMSEYMEKHTVSKIIGSPPG 598
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+RNP+SVIL ++I++A V + + ++ G + DS GR + N
Sbjct: 599 YVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSTGRVVDFKNT 658
Query: 772 IFILTADWLPDSL---KFLSQGITLDEKKLTSLASG 804
+ I+T++ +++ K L + DEK+ L G
Sbjct: 659 VIIMTSNAGAENIVAPKTLGFNVGSDEKQNHELMKG 694
>gi|403382836|ref|ZP_10924893.1| protein ClpC [Paenibacillus sp. JC66]
Length = 807
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 92/182 (50%), Gaps = 19/182 (10%)
Query: 617 LDPDSFKRLLKS---LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
L + +RLLK L +V Q EA AV+ + + + G +R GS +F+G
Sbjct: 491 LKEEETERLLKMEDILHSRVIGQSEAVKAVSQAIRRARAGLKDPKRPMGS-----FIFLG 545
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---E 723
P VGK ++A AL+E + G +I + ++ E R G D+ G E
Sbjct: 546 PTGVGKTELARALAESMFGDENAIIRI-DMSEYMEKHSTSRLVGAPPGYVGYDEGGQLTE 604
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDS 783
V+R P+SV+LL++I++A V + + +E GRL DS GR + N + I+T++ D
Sbjct: 605 KVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGADL 664
Query: 784 LK 785
+K
Sbjct: 665 IK 666
>gi|381204181|ref|ZP_09911252.1| ATPase [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 866
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 23/188 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +++ ES+N++L L P+ + ++V Q +A V+ V + + G N +R
Sbjct: 551 PVSRMLESENEKL--LLLPEHLR-------QRVVGQHQAIETVSDAVLRARSGINDPKRP 601
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A ALSE + M+ + E+ V
Sbjct: 602 LGS-----FIFLGPTGVGKTELARALSEFLFDDEQSMVRIDMSEYMEKHAVARLIGAPPG 656
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ EA++R P+SVIL ++I++A V + + +E GRL DS GR + N
Sbjct: 657 YVGYQEGGQLTEAIRRRPYSVILFDEIEKAHYDVFNILLQILEDGRLTDSQGRTVDFRNT 716
Query: 772 IFILTADW 779
+ ++T++
Sbjct: 717 LILMTSNL 724
>gi|357012846|ref|ZP_09077845.1| ClpC [Paenibacillus elgii B69]
Length = 814
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 19/182 (10%)
Query: 617 LDPDSFKRLLKS---LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
L + +RLLK L ++V Q EA AV+ + + + G +R GS +F+G
Sbjct: 491 LAEEETQRLLKMEDILHDRVIGQDEAVKAVSRAIRRARAGLKDPKRPMGS-----FIFLG 545
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---E 723
P VGK ++A AL+E + G +I + ++ E R G ++ G E
Sbjct: 546 PTGVGKTELARALAESLFGDENAVIRI-DMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTE 604
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDS 783
V+R P+SV+LL++I++A V + + +E GRL DS GR + N + I+T++ D+
Sbjct: 605 KVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGADT 664
Query: 784 LK 785
+K
Sbjct: 665 IK 666
>gi|315649734|ref|ZP_07902818.1| ATPase AAA-2 domain protein [Paenibacillus vortex V453]
gi|315274922|gb|EFU38298.1| ATPase AAA-2 domain protein [Paenibacillus vortex V453]
Length = 818
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E + ++L L + L +V Q+EA AV+ V + + G +R
Sbjct: 487 PVNKLKEEETERLLN---------LEEILHSRVIGQEEAVKAVSRAVRRARAGLKDPKRP 537
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A AL+E + G ++ + ++ E R
Sbjct: 538 MGS-----FIFLGPTGVGKTELARALAEAMFGDENAVVRI-DMSEYMEKHSTSRLVGAPP 591
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ G E V+R P+SV+LL++I++A V + + +E GRL DS GR + N
Sbjct: 592 GYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRN 651
Query: 771 VIFILTADWLPDSLK 785
+ ILT++ +++K
Sbjct: 652 TLIILTSNVGAEAIK 666
>gi|227513972|ref|ZP_03944021.1| ATP-binding subunit of chaperone [Lactobacillus fermentum ATCC
14931]
gi|227087683|gb|EEI22995.1| ATP-binding subunit of chaperone [Lactobacillus fermentum ATCC
14931]
Length = 748
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 23/179 (12%)
Query: 613 LQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFM 671
LQK + + K L K L + V Q EA +A + + ++G N R GS LF+
Sbjct: 423 LQKQ-EQNQLKNLDKQLEDHVIGQNEAVDKIARAIRRNRIGLNKSGRPIGS-----FLFV 476
Query: 672 GPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIG 722
GP VGK + A LS+L+ G+ MI R D E + G ++ G
Sbjct: 477 GPTGVGKTETAKQLSKLLFGSKDAMI----RFDMSEYMDKTSTSKLIGAAPGYVGYEEAG 532
Query: 723 ---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
E V+R+P+S+ILL+++++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 533 QLTEQVRRHPYSLILLDEVEKAHPDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 591
>gi|257064641|ref|YP_003144313.1| chaperone ATPase [Slackia heliotrinireducens DSM 20476]
gi|256792294|gb|ACV22964.1| ATPase with chaperone activity, ATP-binding subunit [Slackia
heliotrinireducens DSM 20476]
Length = 865
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 14/164 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ + L E++ Q EA +A++ + + + G RR AGS +F+GP VGK +++
Sbjct: 514 RMEEVLHERIIGQDEAVTALSKAIRRSRSGLKDPRRPAGS-----FIFLGPSGVGKTELS 568
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIGE---AVKRNPFSVIL 734
AL+E + + ++ E+ V R+ G D+ G+ AV++ P+SV+L
Sbjct: 569 KALAEFLFNSEEALVSFDMSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQRPYSVLL 628
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + +E GRL DS GR + N I I+T++
Sbjct: 629 FDEIEKAHPDVFNILLQILEEGRLTDSQGRSVDFRNTIVIMTSN 672
>gi|451812049|ref|YP_007448503.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777951|gb|AGF48899.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 861
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 88/160 (55%), Gaps = 14/160 (8%)
Query: 629 LMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L K+ Q EA +AV+ + + + G + + R +GS LF+GP VGK ++A AL++
Sbjct: 569 LNSKIIGQSEAVNAVSDAILRARAGLSDQSRPSGS-----FLFLGPTGVGKTELAKALAD 623
Query: 688 LVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVILLEDID 739
+ + MI + E+ V R+ G ++ G EAV+R P+SV+LL++++
Sbjct: 624 FMFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVE 683
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
+A V + + ++ GRL DS+GR + N I I+T++
Sbjct: 684 KAHPDVFNVLLQVLDDGRLTDSHGRTVDFRNTIIIMTSNL 723
>gi|428223611|ref|YP_007107708.1| ATPase [Geitlerinema sp. PCC 7407]
gi|427983512|gb|AFY64656.1| ATPase AAA-2 domain protein [Geitlerinema sp. PCC 7407]
Length = 822
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 23/188 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRG 659
P N L ES++ L L +L E+V QQEA +A A + + ++G G R
Sbjct: 488 PVNHLTESESLMLMH---------LEDTLHERVIGQQEAVTAAARAIRRSRVGLGSPHRP 538
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
S LLF GP VGK ++A AL+ V G+ MI L E V G
Sbjct: 539 IAS-----LLFSGPTGVGKTELAKALAATVFGSEEAMIRLDMSEFMEAHTVSKLIGSPPG 593
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R P++V+LL++I++A V + + +E GRL D+ GR +S N
Sbjct: 594 FVGYDEGGQLTEAVRRKPYTVLLLDEIEKAHPDVFNLLLQLLEDGRLTDARGRVVSFKNT 653
Query: 772 IFILTADW 779
+ ILT++
Sbjct: 654 LIILTSNL 661
>gi|50084451|ref|YP_045961.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter sp. ADP1]
gi|49530427|emb|CAG68139.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Acinetobacter sp. ADP1]
Length = 859
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 20/205 (9%)
Query: 614 QKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
+K L +SF L +V Q EA AV+ V + + G + R +GS LF+G
Sbjct: 555 EKLLQMESF------LHNRVVGQDEAVIAVSNAVRRSRAGLSDPNRPSGS-----FLFLG 603
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EA 724
P VGK ++ AL+ + + MI + E+ V R+ G ++ G EA
Sbjct: 604 PTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEA 663
Query: 725 VKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
V+R P+SV+L +++++A V + + ++ GRL DS GR I N + ++T++ +
Sbjct: 664 VRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDV 723
Query: 785 KFLSQGITLDEKKLTSLASGEWQLR 809
+ L +G T DE + +++ R
Sbjct: 724 RELGEGATDDEVRAVVMSAVSQHFR 748
>gi|386398643|ref|ZP_10083421.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. WSM1253]
gi|385739269|gb|EIG59465.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. WSM1253]
Length = 879
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 29/214 (13%)
Query: 575 KVLESAPEKTHI-EPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKV 633
+++E A HI + V + G P +K+ E + D+L R+ SL ++V
Sbjct: 526 EMMEEAVTANHIAQVVSRWTGV-----PVDKMLEGEKDKLL---------RMEDSLGKRV 571
Query: 634 WWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGA 692
Q EA AVAT V + + G R GS +F+GP VGK ++ AL+E +
Sbjct: 572 VGQAEAVRAVATAVRRSRAGLQDPNRPTGS-----FMFLGPTGVGKTELTKALAEYLFND 626
Query: 693 SPIMIPLGPRRDHEEPEVRVR-----GKTALDKIG---EAVKRNPFSVILLEDIDEADMV 744
M+ L E+ V G D+ G EAV+R P+ V+L ++I++A
Sbjct: 627 ETAMVRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPD 686
Query: 745 VRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
V + + ++ GRL D GR + N + I+T++
Sbjct: 687 VFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSN 720
>gi|295106036|emb|CBL03579.1| ATPases with chaperone activity, ATP-binding subunit [Gordonibacter
pamelaeae 7-10-1-b]
Length = 854
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 582 EKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAAS 641
++ +E + D + + P N L E++ ++L R+ L E+V Q+EA +
Sbjct: 473 QQVTVEDIADVVSMTTGVPVSN-LTEAETEKLL---------RMESVLHERVVGQEEAVT 522
Query: 642 AVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLG 700
A++ + + + G +R AGS +F+GP VGK +++ AL+E + + ++
Sbjct: 523 ALSKAIRRSRSGLKDPKRPAGS-----FIFLGPSGVGKTELSKALAEFLFNSEDALLSFD 577
Query: 701 PRRDHEEPEV-RVRGK----TALDKIGE---AVKRNPFSVILLEDIDEADMVVRGNIKRA 752
E+ V R+ G D+ G+ AV++ P+SV+L ++I++A V + +
Sbjct: 578 MSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQRPYSVVLFDEIEKAHPDVFNILLQI 637
Query: 753 MERGRLVDSYGREISLGNVIFILTAD 778
+E GRL D+ GR + N + I+T++
Sbjct: 638 LEEGRLTDAQGRTVDFRNTVIIMTSN 663
>gi|148269199|ref|YP_001243659.1| ATPase [Thermotoga petrophila RKU-1]
gi|281411497|ref|YP_003345576.1| ATPase AAA-2 domain protein [Thermotoga naphthophila RKU-10]
gi|147734743|gb|ABQ46083.1| ATPase AAA-2 domain protein [Thermotoga petrophila RKU-1]
gi|281372600|gb|ADA66162.1| ATPase AAA-2 domain protein [Thermotoga naphthophila RKU-10]
Length = 792
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 15/170 (8%)
Query: 636 QQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASP 694
Q+EA VA + + + G R G+ LF+GP VGK ++A L+E++ G+
Sbjct: 499 QEEAVKVVADAIRKARAGIKDPNRPVGT-----FLFLGPTGVGKTELAKTLAEVLFGSEN 553
Query: 695 IMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVR 746
+I + E+ V G ++ EAV+R P+SV+LL++I++A V
Sbjct: 554 ALIRIDMTEYMEKHAVSKLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEIEKAHPDVF 613
Query: 747 GNIKRAMERGRLVDSYGREISLGNVIFILTADWLPD-SLKFLSQGITLDE 795
+ + M+ GRL DS G + N I I+T++ D L ++ +G + DE
Sbjct: 614 NVLLQIMDDGRLTDSKGNVVDFKNTIIIMTSNIASDLILNYVKEGKSFDE 663
>gi|313203332|ref|YP_004041989.1| ATPase AAA [Paludibacter propionicigenes WB4]
gi|312442648|gb|ADQ79004.1| ATPase AAA-2 domain protein [Paludibacter propionicigenes WB4]
Length = 836
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 24/230 (10%)
Query: 581 PEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAA 640
PE E V + + +S P Q ++ +++ +L++ D +L KV Q EA
Sbjct: 486 PETVDEEQVAEVVAMMSGIPVQ-RIAQAEGLKLRQMKD---------ALQGKVIGQDEAV 535
Query: 641 SAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPL 699
+ + + + ++G + GS +F+GP VGK +A L+E + +S +I +
Sbjct: 536 NKIVKAIQRNRIGLKDPSKPIGS-----FIFIGPTGVGKTHLAKILAEFMFDSSDALIRV 590
Query: 700 GPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKR 751
E+ V G ++ E V+R P+S+ILL++I++A V + +
Sbjct: 591 DMSEYMEKFSVSRLIGAPPGYVGYEEGGQLTEKVRRKPYSIILLDEIEKAHPDVFNLLLQ 650
Query: 752 AMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKLTSL 801
M+ GRL DS GR I N I I+T++ LK +G+ + T++
Sbjct: 651 VMDEGRLTDSLGRRIDFKNTIIIMTSNVGTRQLKDFGKGVGFNTPAETAM 700
>gi|357420426|ref|YP_004933418.1| ATP-dependent chaperone ClpB [Thermovirga lienii DSM 17291]
gi|355397892|gb|AER67321.1| ATP-dependent chaperone ClpB [Thermovirga lienii DSM 17291]
Length = 870
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P ++L E + ++L RL + L ++V Q EA VA V + + G RR
Sbjct: 554 PVSRLMEGEREKLL---------RLEEVLHQRVVGQDEAVKLVADAVLRARSGIKDPRRP 604
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS +F+GP VGK ++A L+E + + +I + E+ V
Sbjct: 605 IGS-----FIFLGPTGVGKTELAKTLAEALFDSEDNLIRIDMSEYMEKHAVSRLIGAPPG 659
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R P+SVIL ++I++A V + + ++ GRL DS+GR + N
Sbjct: 660 YVGYEEGGQLTERVRRKPYSVILFDEIEKAHQDVFNILLQVLDDGRLTDSHGRTVDFRNT 719
Query: 772 IFILTADWLPDSLKFLSQGITLDEKKLTSLASGEW--QLRLSIR 813
I I+T++ + L +GIT + ++T A E QLRL R
Sbjct: 720 IIIMTSNIGATA---LMEGIT-ESGEITEEARNEVTRQLRLHFR 759
>gi|261409551|ref|YP_003245792.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. Y412MC10]
gi|261286014|gb|ACX67985.1| ATPase AAA-2 domain protein [Paenibacillus sp. Y412MC10]
Length = 818
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E + ++L L + L +V Q+EA AV+ V + + G +R
Sbjct: 487 PVNKLKEEETERLLN---------LEEILHSRVIGQEEAVKAVSRAVRRARAGLKDPKRP 537
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+GP VGK ++A AL+E + G ++ + ++ E R
Sbjct: 538 MGS-----FIFLGPTGVGKTELARALAEAMFGDENAVVRI-DMSEYMEKHSTSRLVGAPP 591
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ G E V+R P+SV+LL++I++A V + + +E GRL DS GR + N
Sbjct: 592 GYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRN 651
Query: 771 VIFILTADWLPDSLK 785
+ ILT++ +++K
Sbjct: 652 TLIILTSNVGAEAIK 666
>gi|154503279|ref|ZP_02040339.1| hypothetical protein RUMGNA_01103 [Ruminococcus gnavus ATCC 29149]
gi|336432911|ref|ZP_08612741.1| hypothetical protein HMPREF0991_01860 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153796273|gb|EDN78693.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus gnavus ATCC 29149]
gi|336017581|gb|EGN47339.1| hypothetical protein HMPREF0991_01860 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 813
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E+ +LQK L ++L ++V Q+EA SAV V + ++G R
Sbjct: 489 PVQKLKETDAHRLQK---------LEETLHKRVIGQEEAVSAVTRAVKRGRVGLKSPNRP 539
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ AL+E + G MI + E+ V G
Sbjct: 540 IGS-----FLFLGPTGVGKTELSKALAEALFGREDSMIRVDMSEYMEKHSVAKMIGSPPG 594
Query: 715 KTALDKIGE---AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G+ V+ +P+SVIL ++I++A V + + ++ GR+ DS GR + N
Sbjct: 595 YVGHDEGGQLSDKVRTHPYSVILFDEIEKAHPDVFNILLQVLDDGRITDSQGRVVDFSNT 654
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 655 VIIMTSN 661
>gi|336393193|ref|ZP_08574592.1| chaperone ClpB [Lactobacillus coryniformis subsp. torquens KCTC
3535]
Length = 864
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 628 SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALS 686
SL ++V Q +A +AV V + + G R GS LF+GP VGK ++A AL+
Sbjct: 566 SLHQRVVGQDQAVTAVTDAVLRSRAGLQDPNRPLGS-----FLFLGPTGVGKTELAKALA 620
Query: 687 ELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRNPFSVILLEDI 738
E + + M+ + E+ V A +G EAV+RNP+S++LL+++
Sbjct: 621 ENLFDSESHMVRIDMSEYMEKSSVSRLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLLDEV 680
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++A V + + ++ GRL D GR + N I I+T++
Sbjct: 681 EKAHSDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSN 720
>gi|325273285|ref|ZP_08139562.1| ATP-dependent chaperone ClpB [Pseudomonas sp. TJI-51]
gi|324101570|gb|EGB99139.1| ATP-dependent chaperone ClpB [Pseudomonas sp. TJI-51]
Length = 854
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 32/233 (13%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +T+ L R+KV E+ E V + G P +K+ E + ++L
Sbjct: 510 ERSLQMVDQHGKTENQLLRNKV----TEEEIAEVVSKWTGI-----PVSKMLEGEREKLL 560
Query: 615 KPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGP 673
K + L ++V Q EA +AVA V + + G + R +GS LF+GP
Sbjct: 561 K---------MEALLHQRVIGQGEAVTAVANAVRRSRAGLSDPNRPSGS-----FLFLGP 606
Query: 674 DRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAV 725
VGK ++ AL+E + M+ + E+ V R+ G ++ G EAV
Sbjct: 607 TGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAV 666
Query: 726 KRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+R P+SV+LL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 667 RRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
>gi|225570736|ref|ZP_03779759.1| hypothetical protein CLOHYLEM_06839 [Clostridium hylemonae DSM
15053]
gi|225160198|gb|EEG72817.1| hypothetical protein CLOHYLEM_06839 [Clostridium hylemonae DSM
15053]
Length = 812
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +L ES++ +L K L ++L ++V Q+EA AV+ + + ++G +R
Sbjct: 488 PVKRLAESESARLNK---------LEQTLHKRVIGQEEAVRAVSKAIKRGRVGLKDPKRP 538
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ ALSE + G MI + E+ V G
Sbjct: 539 IGS-----FLFLGPTGVGKTELSKALSEALFGNEESMIRVDMSEYMEKHSVAKMIGSPPG 593
Query: 715 KTALD---KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D ++ E V+R+P+SV+L ++I++A V + + ++ G + DS GR++ N
Sbjct: 594 YVGHDDGGQLSEQVRRHPYSVVLFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNT 653
Query: 772 IFILTAD 778
+ I+T++
Sbjct: 654 VIIMTSN 660
>gi|335996490|ref|ZP_08562407.1| chaperone ClpB [Lactobacillus ruminis SPM0211]
gi|335351560|gb|EGM53051.1| chaperone ClpB [Lactobacillus ruminis SPM0211]
Length = 858
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 22/179 (12%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L +L E+V Q EA AVA V + + G + GS +F+GP VGK ++A
Sbjct: 554 LADTLHERVIGQDEAVDAVADAVLRSRAGLQDPSKPLGS-----FMFLGPTGVGKTELAK 608
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRNPFSVILL 735
AL+E + + M+ + E+ V A +G EAV+RNP++++L
Sbjct: 609 ALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEEGGQLTEAVRRNPYTIVLF 668
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLD 794
++I++A V + + ++ GRL D GR + N I I+T++ L GI LD
Sbjct: 669 DEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTILIMTSN--------LGSGILLD 719
>gi|323141519|ref|ZP_08076405.1| negative regulator of genetic competence ClpC/MecB
[Phascolarctobacterium succinatutens YIT 12067]
gi|322413978|gb|EFY04811.1| negative regulator of genetic competence ClpC/MecB
[Phascolarctobacterium succinatutens YIT 12067]
Length = 906
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 16/165 (9%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
+L + L ++V Q EA S+V+ V + + G K R GS LF+GP VGK ++A
Sbjct: 571 QLEQRLHKRVIGQDEAVSSVSRAVRRARAGFKDKNRPVGS-----FLFLGPTGVGKTELA 625
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIGE---AVKRNPFSVI 733
AL++ + G M+ ++ E R G D+ G+ AV+R P+ V+
Sbjct: 626 KALAQELFGDERAMLRF-DMSEYMEKHTTARLIGAPPGYVGYDEGGQLTDAVRRKPYCVV 684
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
LL++I++A V + + ME GRL D GR + N + I+T++
Sbjct: 685 LLDEIEKAHPDVFNLLLQIMEDGRLTDGQGRTVDFRNAVLIMTSN 729
>gi|119505584|ref|ZP_01627655.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
proteobacterium HTCC2080]
gi|119458527|gb|EAW39631.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
proteobacterium HTCC2080]
Length = 859
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 14/180 (7%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
D + R+ L E+V Q EA AVA V + + G + R GS LF+GP V
Sbjct: 555 DREKLLRMESVLHERVVGQDEAVIAVANAVRRSRAGLSDPNRPNGS-----FLFLGPTGV 609
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++ AL+ V + M+ L E+ V G A + EAV+R
Sbjct: 610 GKTELCKALASFVFDSDQAMVRLDMSEFMEKHSVARLIGAPPGYVGYEAGGYLTEAVRRR 669
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLS 788
P+S++LL+++++A V + + +E GRL D GR + N + ++T++ D ++ ++
Sbjct: 670 PYSLLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFKNTVIVMTSNLGSDLIQEMA 729
>gi|111021885|ref|YP_704857.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
jostii RHA1]
gi|110821415|gb|ABG96699.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
jostii RHA1]
Length = 807
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P +++ E + ++L +RL L +V Q +A A+A V + + G + R
Sbjct: 487 PASQMTEEEKERL---------RRLEDELHRRVIGQDDAVRAIARAVRRSRTGMSDPDRP 537
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+ + G M+ L E V
Sbjct: 538 VGS-----FLFLGPTGVGKTELAKALAATLFGDENKMLRLDMSEFGERHTVSRLVGAPPG 592
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+RNP+SVILL++I++A V + + ++ GRL D GR + N
Sbjct: 593 YVGYGEAGQLTEQVRRNPYSVILLDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNT 652
Query: 772 IFILTADWLPD-------SLKFLSQGITLDEKKLTSLASGEWQLRLSIR 813
+ I+T++ D +L F + EK L G +LR S+R
Sbjct: 653 VLIMTSNLGSDIISSKSGALGFSTGDAEASEKPLRDRVMG--RLRESMR 699
>gi|420145976|ref|ZP_14653420.1| Chaperone protein ClpB [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398402365|gb|EJN55716.1| Chaperone protein ClpB [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 864
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 628 SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALS 686
SL ++V Q +A +AV V + + G R GS LF+GP VGK ++A AL+
Sbjct: 566 SLHQRVVGQDQAVTAVTDAVLRSRAGLQDPNRPLGS-----FLFLGPTGVGKTELAKALA 620
Query: 687 ELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRNPFSVILLEDI 738
E + + M+ + E+ V A +G EAV+RNP+S++LL+++
Sbjct: 621 ENLFDSESHMVRIDMSEYMEKSSVSRLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLLDEV 680
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++A V + + ++ GRL D GR + N I I+T++
Sbjct: 681 EKAHSDVFNILLQVLDDGRLTDGQGRTVDFKNTIIIMTSN 720
>gi|359419737|ref|ZP_09211685.1| chaperone ClpB [Gordonia araii NBRC 100433]
gi|358244345|dbj|GAB09754.1| chaperone ClpB [Gordonia araii NBRC 100433]
Length = 858
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 22/219 (10%)
Query: 575 KVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQKP----LDPDSFK--RLLKS 628
K LE+A EKT +P +D + + E N + E + P L+ ++ K R+
Sbjct: 512 KELEAALEKTGTDPEEDVM--LQEEVGPNDVAEVVSAWTGVPAGRMLEGETAKLLRMEDE 569
Query: 629 LMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMASALSE 687
L ++V Q EA AV+ V + + G R GS LF+GP VGK ++A AL+E
Sbjct: 570 LGKRVVGQAEAVQAVSDAVRRARAGVADPNRPLGS-----FLFLGPTGVGKTELAKALAE 624
Query: 688 LVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDID 739
+ M+ + E+ V G + ++ EAV+R P+SVIL ++++
Sbjct: 625 FLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYVGYESGGQLTEAVRRRPYSVILFDEVE 684
Query: 740 EADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
+A V + + ++ GRL D GR + N I ILT++
Sbjct: 685 KAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTSN 723
>gi|313893296|ref|ZP_07826871.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
oral taxon 158 str. F0412]
gi|313442192|gb|EFR60609.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
oral taxon 158 str. F0412]
Length = 815
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRV 676
+ ++ L K L ++V Q +A +AVA V + + G +R GS LF+GP V
Sbjct: 495 ESETLLHLEKELHKRVVGQDDAVTAVAKAVRRARAGLKDPKRPIGS-----FLFLGPTGV 549
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+ + G MI L E+ V G ++ +AV+R
Sbjct: 550 GKTELARALASSLFGDESAMIRLDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTDAVRRK 609
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
P+SVILL+++++A + + ++ GRL DS GR + N + I+T++
Sbjct: 610 PYSVILLDEVEKAHADFFNILLQVLDDGRLTDSQGRTVDFRNTVIIMTSNL 660
>gi|295397341|ref|ZP_06807433.1| chaperone protein ClpB [Aerococcus viridans ATCC 11563]
gi|294974415|gb|EFG50150.1| chaperone protein ClpB [Aerococcus viridans ATCC 11563]
Length = 873
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 23/193 (11%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NKL E + ++L L +L +V Q EA +V V + + G R
Sbjct: 554 PVNKLVEGEREKLL---------HLDDTLHTRVVGQDEAVDSVTNAVLRSRAGVQDPNRP 604
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALD 719
GS LF+GP VGK ++A AL+E + + M+ L ++ V A
Sbjct: 605 LGS-----FLFLGPTGVGKTELAKALAEAMFDSENNMVRLDMSEYMDKINVTRLIGAAPG 659
Query: 720 KIG--------EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
+G EAV+RNP++V+LL+++++A V + + ++ GRL DS GR + N
Sbjct: 660 YVGYEEGGQLTEAVRRNPYTVVLLDEVEKAHPDVFNILLQILDDGRLTDSQGRIVDFKNT 719
Query: 772 IFILTADWLPDSL 784
I I+T++ D+L
Sbjct: 720 IIIMTSNLGSDAL 732
>gi|289549041|ref|YP_003474029.1| ATPase AAA [Thermocrinis albus DSM 14484]
gi|289182658|gb|ADC89902.1| ATPase AAA-2 domain protein [Thermocrinis albus DSM 14484]
Length = 984
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 16/176 (9%)
Query: 632 KVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVS 690
+V Q+ A AVA + + + G +R S LF+GP VGK +++ AL+EL+
Sbjct: 688 RVIDQEHAVRAVAEAIRRARAGLKDPKRPIAS-----FLFLGPTGVGKTELSKALAELLF 742
Query: 691 GASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILLEDIDEAD 742
G +I L EE + G K+ EAV+R P+SV+LL+++++A
Sbjct: 743 GDEDALIRLDMSEFKEEHSIAKLIGAPPGYVGYEEGGKLTEAVRRKPYSVLLLDEVEKAH 802
Query: 743 MVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLDEKKL 798
V + ++ GRL DS+GR + N + I+T++ S LS + DE+K+
Sbjct: 803 PRVFDLFLQVLDDGRLTDSHGRTVDFRNTVIIMTSNI--GSQYLLSLSLDGDEEKV 856
>gi|90961178|ref|YP_535094.1| negative regulator of genetic competence [Lactobacillus salivarius
UCC118]
gi|90820372|gb|ABD99011.1| Negative regulator of genetic competence [Lactobacillus salivarius
UCC118]
Length = 830
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 16/176 (9%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
D RL K L +V Q EA AV+ + + + G R GS +F+GP VGK
Sbjct: 511 DRLIRLEKILHNRVIGQDEAVKAVSKAIRRARSGLKDPTRPIGS-----FMFLGPTGVGK 565
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNP 729
++A AL+E + G+ MI + ++ E R G D+ G E V+ NP
Sbjct: 566 TELAKALAEAMFGSEDSMIRI-DMSEYMEKYTTSRLIGSPPGYVGYDEGGQLTEKVRNNP 624
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+SV+LL+++++A V + + ++ G L DS GR++ N I I+T++ +L+
Sbjct: 625 YSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNLGATALR 680
>gi|301299458|ref|ZP_07205734.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|300852940|gb|EFK80548.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 830
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 16/176 (9%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
D RL K L +V Q EA AV+ + + + G R GS +F+GP VGK
Sbjct: 511 DRLIRLEKILHNRVIGQDEAVKAVSKAIRRARSGLKDPTRPIGS-----FMFLGPTGVGK 565
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNP 729
++A AL+E + G+ MI + ++ E R G D+ G E V+ NP
Sbjct: 566 TELAKALAEAMFGSEDSMIRI-DMSEYMEKYTTSRLIGSPPGYVGYDEGGQLTEKVRNNP 624
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+SV+LL+++++A V + + ++ G L DS GR++ N I I+T++ +L+
Sbjct: 625 YSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNLGATALR 680
>gi|289522311|ref|ZP_06439165.1| negative regulator of genetic competence ClpC/MecB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289504147|gb|EFD25311.1| negative regulator of genetic competence ClpC/MecB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 832
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ + + +++ Q+EA S VA + + + G +R GS LF+GP VGK +++
Sbjct: 507 RMEEEIHKRIIDQEEAVSIVAKAIRRARSGLKDPQRPIGS-----FLFLGPTGVGKTELS 561
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVIL 734
AL+E + G MI L E EV G K+ EAV+R P++V+L
Sbjct: 562 KALAEFMFGDENSMIRLDMSEFMERHEVSKLIGAPPGYVGYEEGGKLTEAVRRRPYAVVL 621
Query: 735 LEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++I++A V + + +E GRL D GR + N + I+T++
Sbjct: 622 FDEIEKAHPDVFNILLQILEDGRLTDGQGRVVDFKNTVIIMTSN 665
>gi|433677810|ref|ZP_20509745.1| ATP-dependent Clp protease subunit [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430817074|emb|CCP40175.1| ATP-dependent Clp protease subunit [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 861
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 25/198 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N++ E + D+L R+ L +V QQEA V+ V + + G + R
Sbjct: 547 PVNRMLEGERDKLL---------RMEDELHRRVVGQQEAIKVVSDAVRRSRAGLSDPNRP 597
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
+GS LF+GP VGK ++ AL+E + +S MI + E+ V R
Sbjct: 598 SGS-----FLFLGPTGVGKTELCKALAEFLFDSSEAMIRIDMSEFMEKHSV-ARLIGAPP 651
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ G EAV+R P+S+ILL+++++A V + + ++ GRL D GR + N
Sbjct: 652 GYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRN 711
Query: 771 VIFILTADWLPDSLKFLS 788
+ ++T++ ++ LS
Sbjct: 712 TVIVMTSNLGSHQIQELS 729
>gi|242054405|ref|XP_002456348.1| hypothetical protein SORBIDRAFT_03g034390 [Sorghum bicolor]
gi|241928323|gb|EES01468.1| hypothetical protein SORBIDRAFT_03g034390 [Sorghum bicolor]
Length = 915
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRV 676
D + L L +V Q EA +A+A V + + G G+ ++ GS LF+GP V
Sbjct: 558 DKERLVGLADRLHRRVIGQHEAVNAIAEAVLRSRAGLGRTQQPTGS-----FLFLGPTGV 612
Query: 677 GKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRN 728
GK ++A AL+E + +++ L E+ V G ++ E V+R
Sbjct: 613 GKTELAKALAEQLFDDEKLLVRLDMSEYMEKHSVSRLIGAPPGYVGHEEGGQLTEQVRRR 672
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+SVIL +++++A + V + + ++ GRL D GR + N + I+T++
Sbjct: 673 PYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 722
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 17 ASVLNHSIAEASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCR-ALELC 75
A L H+IA S H Q TPLH+AA L+A G LRQA +H + + + + E
Sbjct: 13 ALALAHNIA--SEAGHAQITPLHLAAALIADRPGVLRQAI--AHASGGNDVAAADSFERV 68
Query: 76 FSVALERLPTAQQNVSPGLDP-PISNALMAALKRAQAHQR-RGCPEQQQQPLLAVKVELE 133
+ L+RLP+ SP D P S AL+ ++RAQ+ Q+ RG LAV +
Sbjct: 69 LASTLKRLPSQ----SPPPDTVPASTALVKVIRRAQSAQKVRGDSH------LAV----D 114
Query: 134 QLIISILDDPSVSRVMREASFSSPAVKATIEQ 165
QL++ +L+DP V ++EA + VKA +++
Sbjct: 115 QLLVGLLEDPQVWDALKEAGVVAARVKAEVDK 146
>gi|398931122|ref|ZP_10664981.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM48]
gi|398164265|gb|EJM52407.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM48]
Length = 854
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 118/235 (50%), Gaps = 36/235 (15%)
Query: 555 ERAVSPLNSPVRTDLVLGRSKVLESAPEKTHIEPVKDFLGCISSEPPQNKLHESQNDQLQ 614
ER++ ++ +++ L RSKV E+ E V + G P +K+ E + ++L
Sbjct: 510 ERSLQMVDQHGKSENQLLRSKV----TEEEIAEVVSKWTGI-----PVSKMLEGEREKLM 560
Query: 615 KPLDPDSFKRLLKSLM-EKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
K ++SL+ ++V Q EA AV+ V + + G + R +GS +F+G
Sbjct: 561 K----------MESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGS-----FMFLG 605
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---E 723
P VGK ++ AL+E + M+ + E+ V R G ++ G E
Sbjct: 606 PTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSV-ARLIGAPPGYVGYEEGGYLTE 664
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
AV+R P+SVILL+++++A V + + +E GRL DS+GR + N + ++T++
Sbjct: 665 AVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSN 719
>gi|320095436|ref|ZP_08027113.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 178 str. F0338]
gi|319977629|gb|EFW09295.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 178 str. F0338]
Length = 822
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 25/194 (12%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L ++V Q EA A+A ++ + + G R GS +F GP VGK ++A
Sbjct: 512 RMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDPNRPGGS-----FIFAGPTGVGKTELA 566
Query: 683 SALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFSVI 733
AL+E + G ++ L + E R G D+ G E V+R PFSV+
Sbjct: 567 KALAEFLFGDEDALVQL-DMSEFSEKHTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 625
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITL 793
L +++++A + ++ + +E GRL DS GR++ N + I+T + + +++G+
Sbjct: 626 LFDEVEKAHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNL---GTRDINKGV-- 680
Query: 794 DEKKLTSLASGEWQ 807
LT S E Q
Sbjct: 681 ----LTGFQSSEHQ 690
>gi|410097352|ref|ZP_11292333.1| chaperone ClpB [Parabacteroides goldsteinii CL02T12C30]
gi|409223442|gb|EKN16377.1| chaperone ClpB [Parabacteroides goldsteinii CL02T12C30]
Length = 862
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 25/189 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NK+ +S+ D+L RL L +V Q EA SA+A V + + G +R
Sbjct: 545 PVNKMLQSERDKLL---------RLEDELHTRVIGQDEAISAIADAVRRSRAGLQDPKRP 595
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
GS +F+G VGK ++A AL+E + +M + +++E R
Sbjct: 596 IGS-----FIFLGTTGVGKTELAKALAEYLFDDENMMTRI-DMSEYQEKFSATRLIGAPP 649
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D+ G EA++R P+SV+L ++I++A V + + ++ GRL D+ GR ++ N
Sbjct: 650 GYVGYDEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKN 709
Query: 771 VIFILTADW 779
I I+T++
Sbjct: 710 TIIIMTSNM 718
>gi|385839981|ref|YP_005863305.1| negative regulator of genetic competence [Lactobacillus salivarius
CECT 5713]
gi|300214102|gb|ADJ78518.1| Negative regulator of genetic competence [Lactobacillus salivarius
CECT 5713]
Length = 832
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 16/176 (9%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
D RL K L +V Q EA AV+ + + + G R GS +F+GP VGK
Sbjct: 513 DRLIRLEKILHNRVIGQDEAVKAVSKAIRRARSGLKDPTRPIGS-----FMFLGPTGVGK 567
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNP 729
++A AL+E + G+ MI + ++ E R G D+ G E V+ NP
Sbjct: 568 TELAKALAEAMFGSEDSMIRI-DMSEYMEKYTTSRLIGSPPGYVGYDEGGQLTEKVRNNP 626
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+SV+LL+++++A V + + ++ G L DS GR++ N I I+T++ +L+
Sbjct: 627 YSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNLGATALR 682
>gi|302557367|ref|ZP_07309709.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
griseoflavus Tu4000]
gi|302474985|gb|EFL38078.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
griseoflavus Tu4000]
Length = 834
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 30/212 (14%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P ++L E + D+L L + L ++V Q EA V+ V + + G + R
Sbjct: 515 PVSRLTEEEKDRLLG---------LEQHLHQRVVGQDEAVRVVSDAVMRSRAGLSSPDRP 565
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR-------- 711
GS LF+GP VGK ++A AL+E + G+ M+ L E V
Sbjct: 566 IGS-----FLFLGPTGVGKTELARALAEALFGSEERMVRLDMSEYQERHTVSRLVGAPPG 620
Query: 712 VRGKTALDKIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
G ++ E V+R+P+S++LL+++++A V + + ++ GRL DS GR + N
Sbjct: 621 YVGHEEAGQLTEVVRRHPYSLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNT 680
Query: 772 IFILTADWLPD-------SLKFLSQGITLDEK 796
+ ++T++ + +L F S G DE+
Sbjct: 681 VIVMTSNLGSEAITRRGATLGFASGGADADEE 712
>gi|392948364|ref|ZP_10313974.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Lactobacillus
pentosus KCA1]
gi|392436346|gb|EIW14260.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Lactobacillus
pentosus KCA1]
Length = 740
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L V Q +A AVA + + ++G NG R GS +F+GP VGK +
Sbjct: 438 MKTLAPDLKSNVIGQDQAVDAVARAIRRNRIGLNGTGRPIGS-----FMFVGPTGVGKTE 492
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFS 731
+A L++ + G+ MI ++ EP + G ++ G E V+R+P+S
Sbjct: 493 LAKQLAKELFGSEDAMIRF-DMSEYMEPHSVAKLIGSPPGYVGYEEAGQLTEQVRRHPYS 551
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++LL+++++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 552 LVLLDEVEKAHPDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 598
>gi|418960617|ref|ZP_13512504.1| negative regulator of genetic competence [Lactobacillus salivarius
SMXD51]
gi|380344284|gb|EIA32630.1| negative regulator of genetic competence [Lactobacillus salivarius
SMXD51]
Length = 832
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 16/176 (9%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
D RL K L +V Q EA AV+ + + + G R GS +F+GP VGK
Sbjct: 513 DRLIRLEKILHNRVIGQDEAVKAVSKAIRRARSGLKDPTRPIGS-----FMFLGPTGVGK 567
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNP 729
++A AL+E + G+ MI + ++ E R G D+ G E V+ NP
Sbjct: 568 TELAKALAEAMFGSEDSMIRI-DMSEYMEKYTTSRLIGSPPGYVGYDEGGQLTEKVRNNP 626
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+SV+LL+++++A V + + ++ G L DS GR++ N I I+T++ +L+
Sbjct: 627 YSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNLGATALR 682
>gi|160935533|ref|ZP_02082908.1| hypothetical protein CLOBOL_00423 [Clostridium bolteae ATCC
BAA-613]
gi|158441277|gb|EDP18987.1| hypothetical protein CLOBOL_00423 [Clostridium bolteae ATCC
BAA-613]
Length = 869
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 26/208 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P KL E ++++L + L L ++V Q+EA +A++ + + ++G +R
Sbjct: 493 PVRKLAEEESERL---------RNLEGILHQRVVGQEEAVTAISKAIRRGRVGLKDPKRP 543
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS LF+GP VGK +++ ALSE + G +I + E+ V G
Sbjct: 544 IGS-----FLFLGPTGVGKTELSKALSEAMFGTENALIRVDMSEYMEKHSVSKMIGSPPG 598
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G E V+RNP+ VIL ++I++A V + + ++ G + D+ GR+I N
Sbjct: 599 YVGYDEGGQLSEKVRRNPYCVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKIDFKNT 658
Query: 772 IFILTADWLPDSL---KFLSQGITLDEK 796
I I+T++ +++ K L G+ D K
Sbjct: 659 IIIMTSNAGAENIISPKRLGFGMVSDAK 686
>gi|449862684|ref|ZP_21777986.1| hypothetical protein SMU101_00060 [Streptococcus mutans U2B]
gi|449265285|gb|EMC62610.1| hypothetical protein SMU101_00060 [Streptococcus mutans U2B]
Length = 610
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
D D + LM++V Q++A AV VT + G S LF+GP VG
Sbjct: 282 DQDRLDGFKEKLMDRVKGQEDAIEAVVDAVTIAQAGLQDENKPISS----FLFLGPTGVG 337
Query: 678 KKKMASALSELVSGASPIMI--PLGPRRDHEEP-------EVRVRGKTALDKIGEAVKRN 728
K +++ A++E + MI + + E+ E R +G+ + E VKR
Sbjct: 338 KTELSKAVAEALFDDEDAMIRFDMSEFKKKEDVSKLIGNRETRTKGQ-----LTEGVKRK 392
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+SV+LL+++++A V + ++ GRL DS GR IS NVI ++T +
Sbjct: 393 PYSVLLLDEVEKAHSEVMDLFLQVLDDGRLTDSSGRLISFKNVIVVMTTN 442
>gi|450128021|ref|ZP_21868842.1| hypothetical protein SMU86_08375 [Streptococcus mutans U2A]
gi|449230054|gb|EMC29334.1| hypothetical protein SMU86_08375 [Streptococcus mutans U2A]
Length = 613
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVG 677
D D + LM++V Q++A AV VT + G S LF+GP VG
Sbjct: 285 DQDRLDGFKEKLMDRVKGQEDAIEAVVDAVTIAQAGLQDENKPISS----FLFLGPTGVG 340
Query: 678 KKKMASALSELVSGASPIMI--PLGPRRDHEEP-------EVRVRGKTALDKIGEAVKRN 728
K +++ A++E + MI + + E+ E R +G+ + E VKR
Sbjct: 341 KTELSKAVAEALFDDEDAMIRFDMSEFKKKEDVSKLIGNRETRTKGQ-----LTEGVKRK 395
Query: 729 PFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P+SV+LL+++++A V + ++ GRL DS GR IS NVI ++T +
Sbjct: 396 PYSVLLLDEVEKAHSEVMDLFLQVLDDGRLTDSSGRLISFKNVIVVMTTN 445
>gi|380513637|ref|ZP_09857044.1| ATP-dependent clp protease subunit protein [Xanthomonas sacchari
NCPPB 4393]
Length = 861
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P NK+ E + D+L R+ L ++V Q+EA V+ V + + G + R
Sbjct: 547 PVNKMLEGERDKLL---------RMEDELHQRVVGQEEAIKVVSDAVRRSRAGLSDPNRP 597
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
+GS LF+GP VGK ++ AL+E + +S MI + E+ V R
Sbjct: 598 SGS-----FLFLGPTGVGKTELCKALAEFLFDSSDAMIRIDMSEFMEKHSV-ARLIGAPP 651
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ G EAV+R P+S+ILL+++++A V + + ++ GRL D GR + N
Sbjct: 652 GYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRN 711
Query: 771 VIFILTADWLPDSLKFLS 788
+ ++T++ ++ LS
Sbjct: 712 TVIVMTSNLGSHQIQELS 729
>gi|417787245|ref|ZP_12434928.1| ATP-dependent Clp protease, ATP-binding subunit clpC [Lactobacillus
salivarius NIAS840]
gi|334307422|gb|EGL98408.1| ATP-dependent Clp protease, ATP-binding subunit clpC [Lactobacillus
salivarius NIAS840]
Length = 832
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 16/176 (9%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
D RL K L +V Q EA AV+ + + + G R GS +F+GP VGK
Sbjct: 513 DRLIRLEKILHNRVIGQDEAVKAVSKAIRRARSGLKDPTRPIGS-----FMFLGPTGVGK 567
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNP 729
++A AL+E + G+ MI + ++ E R G D+ G E V+ NP
Sbjct: 568 TELAKALAEAMFGSEDSMIRI-DMSEYMEKYTTSRLIGSPPGYVGYDEGGQLTEKVRNNP 626
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+SV+LL+++++A V + + ++ G L DS GR++ N I I+T++ +L+
Sbjct: 627 YSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNLGATALR 682
>gi|308272261|emb|CBX28867.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
gi|308272381|emb|CBX28986.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
Length = 860
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 23/187 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P K+ ES+ ++L R+ L +V Q EA AV+ V + + G R
Sbjct: 550 PVRKMLESEREKLV---------RMEDRLAMRVIGQDEALEAVSNAVRRARSGMQDPNRP 600
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR-----G 714
GS +FMGP VGK ++A AL+E + + M+ + E+ V G
Sbjct: 601 IGS-----FIFMGPTGVGKTELAKALAEFIFDSEQAMVRIDMSEYMEKHAVSRLIGAPPG 655
Query: 715 KTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNV 771
D+ G EAV+R P+SV+L ++I++A V + + ++ GR+ D +GR + N
Sbjct: 656 YVGYDEGGYLTEAVRRKPYSVVLFDEIEKAHPEVFNVLLQILDDGRMTDGHGRTVDFKNT 715
Query: 772 IFILTAD 778
I I+T++
Sbjct: 716 IIIMTSN 722
>gi|254556241|ref|YP_003062658.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
plantarum JDM1]
gi|308180216|ref|YP_003924344.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|418274792|ref|ZP_12890290.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448820816|ref|YP_007413978.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
plantarum ZJ316]
gi|254045168|gb|ACT61961.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
plantarum JDM1]
gi|308045707|gb|ADN98250.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|376010358|gb|EHS83684.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448274313|gb|AGE38832.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
plantarum ZJ316]
Length = 739
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKK 680
K L L V Q +A AVA + + ++G NG R GS +F+GP VGK +
Sbjct: 437 MKTLAPDLKSTVIGQDQAVEAVARAIRRNRIGLNGTGRPIGS-----FMFVGPTGVGKTE 491
Query: 681 MASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNPFS 731
+A L++ + G+ MI ++ EP + G ++ G E V+R+P+S
Sbjct: 492 LAKQLAKELFGSQDAMIRF-DMSEYMEPHSVAKLIGSPPGYVGYEEAGQLTEQVRRHPYS 550
Query: 732 VILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
++LL+++++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 551 LVLLDEVEKAHPDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 597
>gi|323340852|ref|ZP_08081103.1| chaperone protein ClpB [Lactobacillus ruminis ATCC 25644]
gi|323091703|gb|EFZ34324.1| chaperone protein ClpB [Lactobacillus ruminis ATCC 25644]
Length = 868
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 22/179 (12%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L +L E+V Q EA AVA V + + G + GS +F+GP VGK ++A
Sbjct: 564 LADTLHERVIGQDEAVEAVADAVLRSRAGLQDPSKPLGS-----FMFLGPTGVGKTELAK 618
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRNPFSVILL 735
AL+E + + M+ + E+ V A +G EAV+RNP++++L
Sbjct: 619 ALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEEGGQLTEAVRRNPYTIVLF 678
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLD 794
++I++A V + + ++ GRL D GR + N I I+T++ L GI LD
Sbjct: 679 DEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTILIMTSN--------LGSGILLD 729
>gi|326803863|ref|YP_004321681.1| ATP-dependent chaperone protein ClpB [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650751|gb|AEA00934.1| ATP-dependent chaperone protein ClpB [Aerococcus urinae
ACS-120-V-Col10a]
Length = 872
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 14/162 (8%)
Query: 632 KVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVS 690
+V Q +A ++V TV + + G R GS LF+GP VGK ++A AL+E V
Sbjct: 574 RVIGQDQAVNSVTDTVLRSRAGIQDPNRPLGS-----FLFLGPTGVGKTELAKALAEQVF 628
Query: 691 GASPIMIPLGPRRDHEEPEV-RVRGKT-------ALDKIGEAVKRNPFSVILLEDIDEAD 742
+ MI + E+ V R+ G + ++ EAV+R+P+SV+LL++I++A
Sbjct: 629 DSEDNMIRIDMSEYMEKANVSRLVGASPGYIGYEEGGQLTEAVRRHPYSVVLLDEIEKAH 688
Query: 743 MVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSL 784
V + + ++ GRL D GR + N I I+T++ D L
Sbjct: 689 SDVYNILLQILDDGRLTDGQGRTVDFKNTIIIMTSNIGSDLL 730
>gi|326511825|dbj|BAJ92057.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 914
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 79/141 (56%), Gaps = 18/141 (12%)
Query: 27 ASRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVALERLPTA 86
AS H Q TPLH+AA L A SG LRQA +H + + + E S AL+RLP+
Sbjct: 21 ASEAGHAQLTPLHLAAALAADRSGILRQAI--AHASGGNDAAVESFERVASTALKRLPSQ 78
Query: 87 QQNVSPGLDP-PISNALMAALKRAQAHQR-RGCPEQQQQPLLAVKVELEQLIISILDDPS 144
SP D P S +L+ A++RAQ+ Q+ RG LAV +QLI+ +L+DP
Sbjct: 79 ----SPPPDTVPASTSLVKAVRRAQSAQKSRGDSH------LAV----DQLIVGLLEDPQ 124
Query: 145 VSRVMREASFSSPAVKATIEQ 165
+S ++EA S+ VKA +E+
Sbjct: 125 ISDALKEAGASAARVKAEVEK 145
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLGNGK-RRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L L ++V Q EA +AV V + + G G+ ++ GS LF+GP VGK ++A
Sbjct: 564 LADRLHQRVVGQYEAVNAVGEAVLRSRAGLGRPQQPTGS-----FLFLGPTGVGKTELAK 618
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVILL 735
AL+E + +++ + E+ V G ++ E V+R P+SVIL
Sbjct: 619 ALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTEQVRRRPYSVILF 678
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADW 779
+++++A + V + + ++ GRL D GR + N + I+T++
Sbjct: 679 DEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL 722
>gi|375335749|ref|ZP_09777093.1| ATP-dependent chaperone protein ClpB [Succinivibrionaceae bacterium
WG-1]
Length = 862
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 628 SLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALS 686
SL +V Q EA A+A ++ + + G + R GS LFMGP VGK ++ +L+
Sbjct: 566 SLHSRVIGQDEAVVAIANSIRRSRAGLSDPNRPIGS-----FLFMGPTGVGKTELCKSLA 620
Query: 687 ELVSGASPIMIPLGPRRDHEEPEV-RVRGK----TALDKIG---EAVKRNPFSVILLEDI 738
E + + M+ + E+ V R+ G D+ G EAV+R P+SVILL++I
Sbjct: 621 EFLFDTTDAMVRIDMSEFMEKFSVSRLVGAPPGYVGYDEGGYLTEAVRRRPYSVILLDEI 680
Query: 739 DEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
++A V + + ++ GRL D GR + N + I+T++ D ++
Sbjct: 681 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNIGSDLIQ 727
>gi|347525498|ref|YP_004832246.1| chaperone ClpB [Lactobacillus ruminis ATCC 27782]
gi|345284457|gb|AEN78310.1| Chaperone ClpB [Lactobacillus ruminis ATCC 27782]
Length = 868
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 22/179 (12%)
Query: 625 LLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMAS 683
L +L E+V Q EA AVA V + + G + GS +F+GP VGK ++A
Sbjct: 564 LADTLHERVIGQDEAVDAVADAVLRSRAGLQDPSKPLGS-----FMFLGPTGVGKTELAK 618
Query: 684 ALSELVSGASPIMIPLGPRRDHEEPEVRVRGKTALDKIG--------EAVKRNPFSVILL 735
AL+E + + M+ + E+ V A +G EAV+RNP++++L
Sbjct: 619 ALAEDLFDSEKHMVRIDMSEYMEKASVSRLVGAAPGYVGYEEGGQLTEAVRRNPYTIVLF 678
Query: 736 EDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITLD 794
++I++A V + + ++ GRL D GR + N I I+T++ L GI LD
Sbjct: 679 DEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTILIMTSN--------LGSGILLD 729
>gi|417809210|ref|ZP_12455892.1| negative regulator of genetic competence [Lactobacillus salivarius
GJ-24]
gi|335351166|gb|EGM52660.1| negative regulator of genetic competence [Lactobacillus salivarius
GJ-24]
Length = 832
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 16/176 (9%)
Query: 620 DSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGK 678
D RL K L +V Q EA AV+ + + + G R GS +F+GP VGK
Sbjct: 513 DRLIRLEKILHNRVIGQDEAVKAVSKAIRRARSGLKDPTRPIGS-----FMFLGPTGVGK 567
Query: 679 KKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---EAVKRNP 729
++A AL+E + G+ MI + ++ E R G D+ G E V+ NP
Sbjct: 568 TELAKALAEAMFGSEDSMIRI-DMSEYMEKYTTSRLIGSPPGYVGYDEGGQLTEKVRNNP 626
Query: 730 FSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLK 785
+SV+LL+++++A V + + ++ G L DS GR++ N I I+T++ +L+
Sbjct: 627 YSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNLGATALR 682
>gi|433461663|ref|ZP_20419269.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
gi|432189835|gb|ELK46900.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
Length = 819
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 19/182 (10%)
Query: 617 LDPDSFKRLL---KSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMG 672
+ D +RLL ++L +V Q+EA A++ + + + G +R GS +F+G
Sbjct: 498 MTKDESERLLNLEETLHNRVIGQEEAVKAISKAIRRARAGLKDPKRPIGS-----FIFLG 552
Query: 673 PDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------GKTALDKIG---E 723
P VGK ++A AL+E + G MI + ++ E R G D+ G E
Sbjct: 553 PTGVGKTELARALAESMFGEEDAMIRI-DMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTE 611
Query: 724 AVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDS 783
V+ P+SV+LL++I++A V + + +E GRL DS GR + N + I+T++
Sbjct: 612 KVRNKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVLIMTSNVGASE 671
Query: 784 LK 785
LK
Sbjct: 672 LK 673
>gi|424790554|ref|ZP_18217088.1| ATP-dependent Clp protease [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422797974|gb|EKU26148.1| ATP-dependent Clp protease [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 861
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 25/198 (12%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRG 659
P N++ E + D+L R+ L +V QQEA V+ V + + G + R
Sbjct: 547 PVNRMLEGERDKLL---------RMEDELHRRVVGQQEAIKVVSDAVRRSRAGLSDPNRP 597
Query: 660 AGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR------ 713
+GS LF+GP VGK ++ AL+E + +S MI + E+ V R
Sbjct: 598 SGS-----FLFLGPTGVGKTELCKALAEFLFDSSEAMIRIDMSEFMEKHSV-ARLIGAPP 651
Query: 714 GKTALDKIG---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G ++ G EAV+R P+S+ILL+++++A V + + ++ GRL D GR + N
Sbjct: 652 GYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRN 711
Query: 771 VIFILTADWLPDSLKFLS 788
+ ++T++ ++ LS
Sbjct: 712 TVIVMTSNLGSHQIQELS 729
>gi|218288465|ref|ZP_03492755.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218241438|gb|EED08612.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 676
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 622 FKRLLKSLMEKVWWQQEAASAVATTVTQCKLGNGKRRGAGSKGDMWLLFMGPDRVGKKKM 681
K L L V Q EA VA + + ++G K G + LF+GP VGK +M
Sbjct: 371 LKNLEADLAAVVIGQDEAVRQVARAIRRSRVGLRK----GDRPIGSFLFVGPTGVGKTEM 426
Query: 682 ASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKRNPFSVI 733
A L+E++ G+ MI L E+ V G ++ E V+R+P+S+I
Sbjct: 427 ARRLAEILFGSKDAMIRLDMSEYMEKHSVSKLIGAPPGYVGYEQAGQLTEQVRRHPYSLI 486
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
L+++I++A V+ + ME GRL DS GR +S + + I+T++
Sbjct: 487 LVDEIEKAHPDVQHIFLQIMEDGRLTDSQGRTVSFKDTLIIMTSN 531
>gi|333918015|ref|YP_004491596.1| chaperone activity ATPase [Amycolicicoccus subflavus DQS3-9A1]
gi|333480236|gb|AEF38796.1| ATPase with chaperone activity, ATP-binding subunit
[Amycolicicoccus subflavus DQS3-9A1]
Length = 851
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 624 RLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMA 682
R+ L +++ Q++A AVA + + + G RR +GS +F GP VGK +++
Sbjct: 507 RMEDELHKRIIGQEDAVRAVAKAIRRTRAGLKDPRRPSGS-----FIFAGPSGVGKTELS 561
Query: 683 SALSELVSGASPIMIPLGPRRDHEE---------PEVRVRGKTALDKIGEAVKRNPFSVI 733
AL+ + G +I + H+ P V G ++ E V+R PFSV+
Sbjct: 562 KALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYV-GYEEGGQLTEKVRRKPFSVV 620
Query: 734 LLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTADWLPDSLKFLSQGITL 793
L ++I++A + + + +E GRL D GR + N + I T++ +S+ + L
Sbjct: 621 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL---GTADISKAVGL 677
Query: 794 DEKKLTSLASGEWQLRLSIRGKTTK 818
TS AS +++L + + K
Sbjct: 678 GFTAGTSEASNYERMKLKVNDELKK 702
>gi|339444381|ref|YP_004710385.1| chaperone ATPase [Eggerthella sp. YY7918]
gi|338904133|dbj|BAK43984.1| ATPase with chaperone activity, ATP-binding subunit [Eggerthella
sp. YY7918]
Length = 854
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 120/238 (50%), Gaps = 31/238 (13%)
Query: 586 IEPVKDFLGCISSEPPQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVAT 645
+E + D + +S+ P + L E++ ++L R+ L E+V Q+EA +A++
Sbjct: 477 VEDIADVV-SMSTGVPVSNLTEAETEKLL---------RMEAVLHERVVGQEEAVTALSK 526
Query: 646 TVTQCKLG-NGKRRGAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRD 704
+ + + G +R AGS +F+GP VGK +++ AL+E + + ++
Sbjct: 527 AIRRSRSGLKDPKRPAGS-----FIFLGPSGVGKTELSKALAEFLFNSEDALLSFDMSEY 581
Query: 705 HEEPEV-RVRGK----TALDKIGE---AVKRNPFSVILLEDIDEADMVVRGNIKRAMERG 756
E+ V R+ G D+ G+ AV++ P+SV+L ++I++A V + + +E G
Sbjct: 582 MEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQRPYSVVLFDEIEKAHPDVFNILLQILEEG 641
Query: 757 RLVDSYGREISLGNVIFILTADW------LPDSLKFLSQGIT-LDEKKLTSLASGEWQ 807
RL D+ GR + N + I+T++ P +L F ++ T L +K++ S E +
Sbjct: 642 RLTDAQGRTVDFRNAVIIMTSNVGAREIAQPTTLGFSAEEHTGLSDKEIKSRVMAEMK 699
>gi|284929770|ref|YP_003422292.1| ATPase family protein associated with various cellular activities
(AAA) [cyanobacterium UCYN-A]
gi|284810214|gb|ADB95911.1| ATPase family protein associated with various cellular activities
(AAA) [cyanobacterium UCYN-A]
Length = 867
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 25/188 (13%)
Query: 601 PQNKLHESQNDQLQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCK--LGNGKRR 658
P NKL +S+ ++L D L EK+ Q+EA +AVA ++ + + L + KR
Sbjct: 551 PLNKLVQSEKEKLLNLED---------DLHEKIVGQEEAVTAVADSIQRSRAGLADPKRP 601
Query: 659 GAGSKGDMWLLFMGPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR----- 713
A LF+GP VGK ++A AL++ + ++ + E +
Sbjct: 602 IAS------FLFLGPTGVGKTELAKALAKSLFDTEESIVRIDMSEYMERHTISRLIGAPP 655
Query: 714 GKTALD---KIGEAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGN 770
G D ++ EA++R+P++VIL ++I++A + + + ++ GRL DS GR ++ N
Sbjct: 656 GYVGYDEGGQLSEAIRRHPYAVILFDEIEKAHADIFNIMLQILDDGRLTDSQGRTVNFKN 715
Query: 771 VIFILTAD 778
I I+T++
Sbjct: 716 TIIIMTSN 723
>gi|260662876|ref|ZP_05863770.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
fermentum 28-3-CHN]
gi|260552957|gb|EEX25956.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
fermentum 28-3-CHN]
Length = 731
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 23/179 (12%)
Query: 613 LQKPLDPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG-NGKRRGAGSKGDMWLLFM 671
LQK + + K L K L + V Q EA +A + + ++G N R GS LF+
Sbjct: 406 LQKQ-EQNQLKNLDKQLEDHVIGQNEAVDKIARAIRRNRIGLNKSGRPIGS-----FLFV 459
Query: 672 GPDRVGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVRVR---------GKTALDKIG 722
GP VGK + A LS+L+ G+ MI R D E + G ++ G
Sbjct: 460 GPTGVGKTETAKQLSKLLFGSKDAMI----RFDMSEYMDKTSTSKLIGAAPGYVGYEEAG 515
Query: 723 ---EAVKRNPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
E V+R+P+S+ILL+++++A V + ++ GRL DS GR +S + I I+T++
Sbjct: 516 QLTEQVRRHPYSLILLDEVEKAHPDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSN 574
>gi|115487910|ref|NP_001066442.1| Os12g0230100 [Oryza sativa Japonica Group]
gi|122248633|sp|Q2QVG9.2|CLPC2_ORYSJ RecName: Full=Chaperone protein ClpC2, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 2; AltName: Full=Casein lytic proteinase C2;
Flags: Precursor
gi|108862366|gb|ABA96309.2| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|108862367|gb|ABG21929.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648949|dbj|BAF29461.1| Os12g0230100 [Oryza sativa Japonica Group]
Length = 919
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 618 DPDSFKRLLKSLMEKVWWQQEAASAVATTVTQCKLG--NGKRRGAGSKGDMWLLFMGPDR 675
+ D ++ ++L ++V Q EA A++ ++ + ++G N R A +F GP
Sbjct: 590 ESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKNPNRPIAS------FIFAGPTG 643
Query: 676 VGKKKMASALSELVSGASPIMIPLGPRRDHEEPEVR--------VRGKTALDKIGEAVKR 727
VGK ++A AL+ G+ MI L E V G T ++ EAV+R
Sbjct: 644 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 703
Query: 728 NPFSVILLEDIDEADMVVRGNIKRAMERGRLVDSYGREISLGNVIFILTAD 778
P++V+L ++I++A V + + +E GRL DS GR + N + I+T++
Sbjct: 704 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 754
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,773,311,299
Number of Sequences: 23463169
Number of extensions: 673032995
Number of successful extensions: 1499364
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10961
Number of HSP's successfully gapped in prelim test: 1099
Number of HSP's that attempted gapping in prelim test: 1468982
Number of HSP's gapped (non-prelim): 19453
length of query: 1013
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 860
effective length of database: 8,769,330,510
effective search space: 7541624238600
effective search space used: 7541624238600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 82 (36.2 bits)