Your job contains 1 sequence.
>001796
MALELIPIGTILAVLTNQVIKTAQAAKNVVYEKESFKVLSKHLFDIESVLKELQLQKLND
SQAVRLALESLEADVEKANNLVEKYKNKSRFYLLVKCRYIVNEIQEVTRNIGRSLASLSL
ANTEVLSEISDQMNRLQNEMQRVEFKASQSQIVDKLNQGLRDQKLDQGFANDMLEEIARA
VGVPVEPSEISKELASFRREKEEAANRKERAEVLFLDQVIELLSRADAARDYEEVKKQYF
QRLQIIERYDSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDP
ETGVVLEDTSLRSNSPLRQSIEEWKELNYCLNIRCCRAKLLSGIDSSELEALDQMQDLMR
ESSINKDWISIGGITDIIISILGSSHNKDVKMKILITLKQLVKGHARNKEKVIDYGGWDH
IVPCLGRDPSISLAAVKLLYELMQDRSGWNVAVCRKLSQQCSGILFLVTLIKGPVRESAE
CAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLEL
LGKEGIIPPLLGLVGSGNFQSKELSLSVLVKLSGCSKNRELISAAGGIPQVLELMFSSHV
PSNIIVKCSEILEKLSSDGIKFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPALRA
LFRICKSEAELVKIAVVKANGVSLILSLLDDTDSEVREIAINLLFLFSHHEPEGVVEYLL
KPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTM
EAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAAALIGTLSTSS
PKFTDMPESAGCWCFRPSRAHLCQVHGGICSESTSFCLLKANALPHLVKLLQGRVHATAY
EAIQTLSTLVQEGCQQRGVNVLHQEEAIKPTLEILTWGTDSLKEEALGFLEKVFMSKEMV
DTYGSSARLLLVPLTSRNVHEDGSLERKAAKVLSLIERYSRSSTSLIPGLFG
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001796
(1012 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 321 4.6e-38 2
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 359 2.9e-29 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 150 8.0e-16 2
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 173 3.4e-15 2
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 128 5.5e-14 3
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 158 5.9e-13 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 135 1.9e-11 3
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 125 4.3e-11 2
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 133 7.7e-11 2
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 124 1.5e-10 2
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 127 4.0e-10 2
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 123 4.5e-10 2
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 119 8.5e-10 2
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 101 1.2e-09 3
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 142 1.5e-09 4
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 116 4.0e-09 2
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 120 2.2e-08 2
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 115 1.7e-07 2
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 99 2.9e-07 3
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 107 1.2e-06 2
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 126 1.3e-06 3
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 105 1.8e-06 3
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 141 3.1e-06 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 116 5.1e-06 2
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 124 5.8e-06 3
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 125 6.6e-06 2
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 139 6.9e-06 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 137 8.8e-06 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 108 1.2e-05 2
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 129 1.5e-05 2
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 134 2.3e-05 3
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 134 3.7e-05 2
TAIR|locus:2055033 - symbol:ARABIDILLO-1 "AT2G44900" spec... 137 3.8e-05 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 134 4.4e-05 3
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 105 5.5e-05 3
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 101 7.6e-05 2
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 130 8.0e-05 3
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 127 0.00019 1
SGD|S000005133 - symbol:SRP1 "Karyopherin alpha homolog" ... 127 0.00022 1
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 117 0.00024 2
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 94 0.00026 3
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 116 0.00038 2
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 98 0.00043 3
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 120 0.00049 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 123 0.00050 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 123 0.00050 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 99 0.00073 2
POMBASE|SPBC354.14c - symbol:vac8 "vacuolar protein Vac8 ... 122 0.00079 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 121 0.00081 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 121 0.00082 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 121 0.00082 1
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 321 (118.1 bits), Expect = 4.6e-38, Sum P(2) = 4.6e-38
Identities = 140/535 (26%), Positives = 237/535 (44%)
Query: 261 AFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDR-REKTDP-ETGVVLEDTSLRSNSP-- 316
AF C +T VM +PV+L G T ER AIE W RE P + ++ S+ SP
Sbjct: 28 AFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPSI 87
Query: 317 -LRQSIEEWKELNYCLNIRCCRAKL-LSGIDSSELEALDQMQDLMRE-SSINKDWXXXXX 373
LR +IEEW+ N L + R L L +++ L AL ++++ R I +
Sbjct: 88 ALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQRVCNPQL 147
Query: 374 XXXXXXXXXXXXHNKDVKMKILITLKQLVKGHARNKEKVIDYGGWDHIVPCLGRDPSISL 433
H +V+ K L TL+ +V+G +K V + IV L ++PS
Sbjct: 148 VRLITDMLKSSSH--EVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSKGR 205
Query: 434 -AAVKLLYELMQDRSGWNVAVCRKLSQQCSGILFLVTLI--KGPVRESAECAEKILQQLF 490
AAV +L+EL + A+C K+ I+ LV L K + E A+K L L
Sbjct: 206 EAAVSVLFELSKSE-----ALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNL- 259
Query: 491 DVDEENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPL 550
+ EEN + A +G +PL+ ++++G+ +++ M L + ++++++++ + + L
Sbjct: 260 ERSEENVRQMAINGRLQPLLAKLLEGSPETKV-SMAFYLGVLALNNDVKVIVAQTVGSSL 318
Query: 551 LGLVGSGNFQXXXXXXXXXXXXXGCSKNRELISAAGGIPQVLELMFSSHV-PSNIIVKCS 609
+ L+ + + + +L+ G +P +++ +F +V P+ + ++
Sbjct: 319 IDLMRTRDMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLF--YVGPNQLPIRLK 376
Query: 610 E----ILEKLSSDGIKF---LVDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPALRALF 662
E IL + + G F V L E IV NLL L N + A+
Sbjct: 377 EVSATILANIVNIGYDFDKVPVGPHHQTLVSEEIVENLLQLTSNTGPEIQGKLLAVLVGL 436
Query: 663 RICKSEAELVKIAVVKANGVXXXXXXXXXXXXE-VREIAINLLFLFSHHEPEGVVEYLLK 721
C + V A+ + + + +R +I LL S H E + L
Sbjct: 437 TSCPNSVINVVSAIRNSAAIISLVQFVEIHENDDLRLASIKLLHNISPHMSEELANALRS 496
Query: 722 PK-RLEALVGFL-ENDAK-HDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIIN 773
+L +LV + EN + Q AAAGLLA LP+ +L LTM+L+ II+
Sbjct: 497 TVGQLGSLVSIISENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGAFEKIIS 551
Score = 174 (66.3 bits), Expect = 4.6e-38, Sum P(2) = 4.6e-38
Identities = 63/239 (26%), Positives = 104/239 (43%)
Query: 784 ENALSALFRFTDPTNLEAQRNVV--ERGVYPLLVNLLQIGSITAKARAAAL-IGTLSTSS 840
E +S L R T E + E+ + L ++LLQ S RA+A + LS S
Sbjct: 572 EGLVSILARITFALTKETDATLFCCEKNLPSLFLDLLQSNSQDNIQRASATALENLSLES 631
Query: 841 PKFTDMPESA---------GCWCFRPSRAHLCQVHGGICSESTSFCLLKANALPHLVKLL 891
T +PE C P +C++H GICS SFCL++ A+ LV LL
Sbjct: 632 KNLTKIPELPPPTYCVSIFSCLSKPPVVLGICKIHQGICSVRESFCLVEGQAVDKLVDLL 691
Query: 892 QGRVHATAYEAIQTLSTLVQEGCQQ-RGVNVLHQEEAIKPTLEILTWG-TDSLKEEALGF 949
A+ LSTL+++G +GV ++ + + I P L +L T++L+ A+
Sbjct: 692 DHENDKVVGPALAALSTLLEDGLDVVQGVRLIDEADGITPILNVLLENRTENLRIRAVWM 751
Query: 950 LEKVFMSKEMVDTYGSSARLL--LVPLTSRNVHEDGSLERKAAKVLSLIERYSRSSTSL 1006
+E++ +E+ G + LV + KA + + I +S T++
Sbjct: 752 VERILRIEEIAREVGEEQNVTAALVDAFQNADFRTRQIAEKALRHIDKIPNFSGIFTNI 810
Score = 53 (23.7 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 17/84 (20%), Positives = 37/84 (44%)
Query: 431 ISLAAVKLLYELMQDRSGWNVAVCRKLSQQCSGILFLVTLIKGPVRESAECAEKILQQLF 490
+ LA++KLL+ + S R Q ++ +++ + E A +L +L
Sbjct: 471 LRLASIKLLHNISPHMSEELANALRSTVGQLGSLVSIISENTPTITEEQAAAAGLLAELP 530
Query: 491 DVDEENFCRAAKSGWYKPLIDRII 514
+ D R + G ++ +I +I+
Sbjct: 531 ERDLVLTMRLLREGAFEKIISKIV 554
Score = 52 (23.4 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 51 KELQLQKLNDSQAVRLALESLEA--DVEKANNLVEK-YKNKSRFYLLVKCRYIVNEIQEV 107
KEL + L+ S A+R +E A D K + + Y + +L+ + ++E+
Sbjct: 76 KELSITDLSPSIALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALK----NVREI 131
Query: 108 TRNIGRSLASLSLANTEVLSEISDQMNRLQNEMQRVEFKASQS-QIV 153
RNI R + + N +++ I+D + +E V KA Q+ Q+V
Sbjct: 132 CRNI-RKIRQ-RVCNPQLVRLITDMLKSSSHE---VRCKALQTLQVV 173
Score = 51 (23.0 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 719 LLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLT--MKLI-ELDGLNAIINIL 775
L++ + ++ LV L+++ V A A L + L + L + ++LI E DG+ I+N+L
Sbjct: 678 LVEGQAVDKLVDLLDHENDKVVGPALAAL-STLLEDGLDVVQGVRLIDEADGITPILNVL 736
Query: 776 KSGTME 781
E
Sbjct: 737 LENRTE 742
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 359 (131.4 bits), Expect = 2.9e-29, P = 2.9e-29
Identities = 182/720 (25%), Positives = 311/720 (43%)
Query: 261 AFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDR-----REKTDPETGVVLEDTSLRSNS 315
AF C +T VM DPV+L G T ER AIE W R + P T L T + ++
Sbjct: 26 AFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASI 85
Query: 316 PLRQSIEEWKELNYCLNIRCCRAKLLSG-IDSSELEALDQMQDLMRESSINKDWXXXXXX 374
LR +IEEW+ N + R L G ++ L+AL ++ + R N+
Sbjct: 86 ALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALMHVRQICRTIRSNRHGVRNSQL 145
Query: 375 XXXXXXXXXXXHNKDVKMKILITLKQLVKGHARNKEKVIDYGGWDHIVPCLGRDPSISL- 433
++ V+ K L TL+ +V+G +K V + +V L +PS
Sbjct: 146 IHMIIDMLKSTSHR-VRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVKFLSHEPSKGRE 204
Query: 434 AAVKLLYELMQDRSGWNVAVCRKLSQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVD 493
AAV LL+EL + A+C K+ ++ LV L E+ EK + L +++
Sbjct: 205 AAVSLLFELSKSE-----ALCEKIGSIHGALILLVGLTSSN-SENVSIVEKADRTLENME 258
Query: 494 --EENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLL 551
EE + A G +PL+ ++++G+ +++ M L + L ++++++L + + L+
Sbjct: 259 RSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPL-NNDVKVLVAQTVGSSLV 317
Query: 552 GLVGSGNFQXXXXXXXXXXXXXGCSKNRELISAAGGIPQVLELMFSSHV-PSNIIVKCSE 610
L+ SG+ + +++ + G +P +++ +F +V P+N+ ++ E
Sbjct: 318 DLMRSGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDLF--YVGPNNLPIRLKE 375
Query: 611 ILEKLSSDGIKFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAE 670
+ + ++ + D L E V NLL L N + + L L +
Sbjct: 376 VSATILANIVNIGYDFDKATLVSENRVENLLHLISNTGPAIQCK--LLEVLVGLTSCPKT 433
Query: 671 LVKIA-VVKANG--VXXXXXXXXXXXXEVREIAINLLFLFSHHEPEGVVEYLLKPK-RLE 726
+ K+ +K +G + ++R +I LL S E + + L +L
Sbjct: 434 VPKVVYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKALCGTAGQLG 493
Query: 727 ALVGFL-ENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINI---LKSGTMEA 782
+LV + E + Q AAAGLLA LP +L LT +++E+ II+ ++ G ++
Sbjct: 494 SLVAIISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVFGIRQGDIKG 553
Query: 783 K-------ENALSALFRFTDPTNLEAQR-NVV-ERGVYPLLVNLLQI-GSITAKARAAAL 832
E + L R T N EA+ N E V L ++LLQ G + +A
Sbjct: 554 MRFVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQDNIQMVSAMA 613
Query: 833 IGTLSTSSPKFTDMPESAGCWCFRPSRAHLCQVHGGICSESTSFCLLKANALPHLVKLLQ 892
+ LS S K T MP+ P + C G I S C+ K PH+V L
Sbjct: 614 LENLSLESIKLTRMPD--------PPPVNYC---GSIFS-----CVRK----PHVVNGLC 653
Query: 893 GRVHATAYEAIQTLSTLVQEGCQQRGVNVLHQEEAIKPTLEILTWGTDSLKEEALGFLEK 952
++H +T LV+ G ++ V +L E +K +E SL E+ L +EK
Sbjct: 654 -KIHQGICSLRETFC-LVEGGAVEKLVALLDHEN-VK-VVEAALAALSSLLEDGLD-VEK 708
Score = 166 (63.5 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 61/205 (29%), Positives = 99/205 (48%)
Query: 784 ENALSALFRFTDPTNLEAQR-NVV-ERGVYPLLVNLLQI-GSITAKARAAALIGTLSTSS 840
E + L R T N EA+ N E V L ++LLQ G + +A + LS S
Sbjct: 562 EGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQDNIQMVSAMALENLSLES 621
Query: 841 PKFTDMPESAG---CW----CFR-PSRAH-LCQVHGGICSESTSFCLLKANALPHLVKLL 891
K T MP+ C C R P + LC++H GICS +FCL++ A+ LV LL
Sbjct: 622 IKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRETFCLVEGGAVEKLVALL 681
Query: 892 QGRVHATAYEAIQTLSTLVQEGCQ-QRGVNVLHQEEAIKPTLEILTWG-TDSLKEEALGF 949
A+ LS+L+++G ++GV +L + + I+ L +L T+ L A+
Sbjct: 682 DHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVLRENRTERLTRRAVWM 741
Query: 950 LEKVF----MSKEMVDTYGSSARLL 970
+E++ +++E+ + SA L+
Sbjct: 742 VERILRIEDIAREVAEEQSLSAALV 766
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 150 (57.9 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 71/290 (24%), Positives = 126/290 (43%)
Query: 725 LEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKE 784
L +L+ L + D Q AAAG + L K ++ + + E + ++N+L S +E
Sbjct: 325 LVSLMNRLRS-GNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQE 383
Query: 785 NALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAAALIGTLST-SSPKF 843
+A++AL + N +A ++V+ P +V +L+ GS+ + AAA + +LS K
Sbjct: 384 HAVTALLNLSIHENNKA--SIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKV 441
Query: 844 T-----DMPESAGCWCFRPSRAHLCQVHG--GICS-ESTSFCLLKANALPHLVKLLQGRV 895
T +P C R +C + +KA + HL+ L
Sbjct: 442 TIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPT 501
Query: 896 HATAYEAIQTLSTLVQEGCQQRGVNVLHQEEAIKPTLEILTWGTDSLKEEALGFLEKVFM 955
EA+ LS L G G V+ + E I P +E++ G+ +E A L +
Sbjct: 502 GGMIDEALSLLSILA--G-NPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILW-LLC 557
Query: 956 SKEMVDTYGSSARLLLVPLTSRNVHEDGS--LERKAAKVLSLIERYSRSS 1003
S + T + A + L + + E G+ +RKA+ +L L+ + + S
Sbjct: 558 SADTEQTLAAKAAGVEDAL--KELSETGTDRAKRKASSILELMHQANEDS 605
Score = 136 (52.9 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F+C I+ +M DPV + +G T ER+ I+ WLD KT P+T L TSL N L+ I
Sbjct: 232 FRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLI 291
Query: 322 EEWKELN 328
+W E N
Sbjct: 292 SQWCEAN 298
Score = 83 (34.3 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 26/99 (26%), Positives = 42/99 (42%)
Query: 460 QCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAES 519
+ I LV L+ + E A L L + E N S +++ + G+
Sbjct: 363 EAGAIPLLVNLLSSSDPRTQEHAVTALLNL-SIHENNKASIVDSHAIPKIVEVLKTGSME 421
Query: 520 SRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGN 558
+R L S+ +VD N +G G IPPL+ L+ G+
Sbjct: 422 TRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGS 460
Score = 75 (31.5 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 767 GLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITAK 826
GL +++N L+SG + ++ A + R N+ + + E G PLLVNLL +
Sbjct: 324 GLVSLMNRLRSGNQD-EQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQ 382
Query: 827 ARAAALIGTLS 837
A + LS
Sbjct: 383 EHAVTALLNLS 393
Score = 74 (31.1 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 23/134 (17%), Positives = 60/134 (44%)
Query: 462 SGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSR 521
+G++ L+ ++ ++ A ++ L + N A++G L++ + ++
Sbjct: 323 AGLVSLMNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQ 382
Query: 522 ILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXGCSKNREL 581
+ ALL++ + ++N + IP ++ ++ +G+ + +N+
Sbjct: 383 EHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVT 442
Query: 582 ISAAGGIPQVLELM 595
I AAG IP ++ L+
Sbjct: 443 IGAAGAIPPLINLL 456
Score = 44 (20.5 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 578 NRELISAAGGIPQVLELMFSS 598
NR I+ AG IP ++ L+ SS
Sbjct: 357 NRICIAEAGAIPLLVNLLSSS 377
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 173 (66.0 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 70/329 (21%), Positives = 151/329 (45%)
Query: 39 LSKHLFDIESVLKELQLQKLNDSQAVRLALESLEADVEKANNLVEKYKNKSRFYLLVKCR 98
L++ L + + +E++ S+ L +L+ + A + ++ S+ YL+++
Sbjct: 36 LARRLKLLVPMFEEIRESNEPISEDTLKTLMNLKEAMCSAKDYLKFCSQGSKIYLVMERE 95
Query: 99 YIVNEIQEVTRNIGRSLASLSLANTEVLSEISDQMNRLQNEMQRVEFKA--SQSQIVDKL 156
+ +++ EV+ + +SL+ + ++ E+ +Q+ + ++ +R + + S ++ + L
Sbjct: 96 QVTSKLMEVSVKLEQSLSQIPYEELDISDEVREQVELVLSQFRRAKGRVDVSDDELYEDL 155
Query: 157 NQGLRDQKLDQGFANDMLEEIARAVGVPVEPSEISKE---LASFXXXXXXXXXXXXXXXV 213
Q L ++ D +LE +A+ + + +E ++++E L
Sbjct: 156 -QSLCNKSSDVDAYQPVLERVAKKLHL-MEIPDLAQESVALHEMVASSGGDVGENIEEMA 213
Query: 214 LFLDQVIELLSRADAARDYEEVKKQYFQRLQIIERYDSRENYIQPLNAFKCRITGTVMMD 273
+ L + + + D + ++V Q S++ + P + F+C I+ +M D
Sbjct: 214 MVLKMIKDFVQTEDDNGEEQKVGVNSRSNGQT-STAASQKIPVIP-DDFRCPISLEMMRD 271
Query: 274 PVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSIEEWKELNYCLNI 333
PV + +G T ER IE W++ T P+T L T+L N LR I +W E N
Sbjct: 272 PVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSLIAQWCEANDIEPP 331
Query: 334 R---CCRAKLLSGIDSSELEALDQMQDLM 359
+ R + +S SS EA ++++DLM
Sbjct: 332 KPPSSLRPRKVSSF-SSPAEA-NKIEDLM 358
Score = 107 (42.7 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 63/301 (20%), Positives = 122/301 (40%)
Query: 496 NFCRAAKSGWYKPLIDRIIQG-AESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLV 554
+F A++ + L+ R+ G E R + L + N + + G IP L+GL+
Sbjct: 344 SFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLL 403
Query: 555 GSGNFQXXXXXXXXXXXXXGCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEK 614
+ + + C N+ I +AG IP +++++ + + + L
Sbjct: 404 STPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEAR--ENAAATLFS 461
Query: 615 LSS-DGIKFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVK 673
LS D K + G + P+V LL + +K A ALF +C + K
Sbjct: 462 LSVIDENKVTIGALG---AIPPLVV-LLN-----EGTQRGKKDAATALFNLCIYQGNKGK 512
Query: 674 IAVVKANGVXXXXXXXXXXXXEVREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLE 733
++A + + + A+ +L + S H PEG + + +LV F+
Sbjct: 513 --AIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSH-PEGKA-IIGSSDAVPSLVEFIR 568
Query: 734 NDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRF 793
+ + + AAA +L +L + ++ +L + +I++ +GT K A L R
Sbjct: 569 TGSPRNRENAAA-VLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERI 627
Query: 794 T 794
+
Sbjct: 628 S 628
Score = 94 (38.1 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 63/290 (21%), Positives = 118/290 (40%)
Query: 724 RLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAK 783
++E L+ L D Q +AAG + L K + + E + ++ +L + +
Sbjct: 353 KIEDLMWRLAYGNPED-QRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQ 411
Query: 784 ENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAAALIGTLSTSSPKF 843
E++++AL + N + +V G P +V +L+ GS+ A+ AAA + +LS
Sbjct: 412 EHSVTALLNLSICENNKGA--IVSAGAIPGIVQVLKKGSMEARENAAATLFSLSV----I 465
Query: 844 TDMPESAGCWCFRPSRAHLCQ--VHGGICSESTSF---CL--------LKANALPHLVKL 890
+ + G P L G +T+ C+ ++A +P L +L
Sbjct: 466 DENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRL 525
Query: 891 LQGRVHATAYEAIQTLSTLVQEGCQQRGVNVLHQEEAIKPTLEILTWGTDSLKEEALGFL 950
L EA+ L+ L G ++ +A+ +E + G+ +E A L
Sbjct: 526 LTEPGSGMVDEALAILAIL---SSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVL 582
Query: 951 EKVFMS--KEMVDTYGSSARLLLVPLTSRNVHEDGSLERKAAKVLSLIER 998
+ + +V+ L+ L N + G +RKAA++L I R
Sbjct: 583 VHLCSGDPQHLVEAQKLGLMGPLIDLAG-NGTDRG--KRKAAQLLERISR 629
Score = 85 (35.0 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 37/158 (23%), Positives = 62/158 (39%)
Query: 460 QCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAES 519
+ I LV L+ P E + L L + E N +G ++ + +G+
Sbjct: 392 EAGAIPLLVGLLSTPDSRIQEHSVTALLNL-SICENNKGAIVSAGAIPGIVQVLKKGSME 450
Query: 520 SRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXGCSKNR 579
+R L S+ ++D N +G G IPPL+ L+ G + N+
Sbjct: 451 ARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNK 510
Query: 580 ELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSS 617
AG IP + L+ + S ++ + IL LSS
Sbjct: 511 GKAIRAGVIPTLTRLL--TEPGSGMVDEALAILAILSS 546
Score = 66 (28.3 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 55/271 (20%), Positives = 100/271 (36%)
Query: 673 KIAVVKANGVXXXXXXXXXXXXEVREIAINLLFLFSHHEP-EGVVEYLLKPKRLEALVGF 731
++A+ +A + ++E ++ L S E +G + + + +V
Sbjct: 387 RVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAI---VSAGAIPGIVQV 443
Query: 732 LENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALF 791
L+ + + AAA L + E +T+ L + ++ +L GT K++A +ALF
Sbjct: 444 LKKGSMEARENAAATLFSLSVIDENKVTIGA--LGAIPPLVVLLNEGTQRGKKDAATALF 501
Query: 792 RFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAAALIGTLST---------SSPK 842
+ + + GV P L LL A A++ LS+ SS
Sbjct: 502 NLCIYQGNKGK--AIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDA 559
Query: 843 FTDMPESAGCWCFRPSRAHLCQVHGGICSESTSFCL--LKANALPHLVKLLQGRVHATAY 900
+ E R +R + V +CS + K + L+ L
Sbjct: 560 VPSLVEFIRTGSPR-NRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKR 618
Query: 901 EAIQTLSTLVQEGCQQRGVNVLHQEEAIKPT 931
+A Q L + + QQ+ V EE +PT
Sbjct: 619 KAAQLLERISRLAEQQKETAVSQPEEEAEPT 649
Score = 64 (27.6 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 36/179 (20%), Positives = 72/179 (40%)
Query: 450 NVAVCR--KLSQQCSGIL-FLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWY 506
N+++C K + +G + +V ++K E+ E A L L +DE A G
Sbjct: 420 NLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGAL-GAI 478
Query: 507 KPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXX 566
PL+ + +G + + AL ++ + N + G+IP L L+
Sbjct: 479 PPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEAL 538
Query: 567 XXXXXXXGCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSSDGIKFLVD 625
+ + +I ++ +P ++E + + P N + +L L S + LV+
Sbjct: 539 AILAILSSHPEGKAIIGSSDAVPSLVEFIRTGS-PRNR-ENAAAVLVHLCSGDPQHLVE 595
Score = 50 (22.7 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 16/55 (29%), Positives = 23/55 (41%)
Query: 467 LVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSR 521
LV I+ + E A +L L D ++ A K G PLID G + +
Sbjct: 563 LVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGK 617
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 128 (50.1 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 33/92 (35%), Positives = 46/92 (50%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F+C I+ +M DPV + TG T ER++I+ WLD KT P++ L L N L+ I
Sbjct: 252 FRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLI 311
Query: 322 EEWKELNYC---LNIRCCRAKLLSGIDSSELE 350
W E N N CR + G SS+ +
Sbjct: 312 ALWCESNGIELPQNQGSCRTTKIGGSSSSDCD 343
Score = 115 (45.5 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 59/279 (21%), Positives = 118/279 (42%)
Query: 741 QMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLE 800
Q AAAG L L K + + + E + ++ +L S +E++++AL + N
Sbjct: 362 QRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLS--INEG 419
Query: 801 AQRNVVERGVYPLLVNLLQIGSITAKARAAALIGTLSTSSPKFTDMPESAGCWCF----- 855
+ +V+ G +V +L+ GS+ A+ AAA + +LS + +
Sbjct: 420 NKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLE 479
Query: 856 ---RPSRAHLCQVHGGICS-ESTSFCLLKANALPHLVKLLQGRVHATAYEAIQTLSTLVQ 911
R + +C + +K + L +LL+ EA+ L+ L
Sbjct: 480 EGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAIL-- 537
Query: 912 EGCQQRGVNVLHQEEAIKPTLEILTWGTDSLKEEALGFLEKVFMSKEMVDTYGSSARLLL 971
Q G + + E+I +EI+ G+ +E A L + + ++ + AR +
Sbjct: 538 -STNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGN--IERL-NVAREVG 593
Query: 972 VPLTSRNVHEDGS--LERKAAKVLSLIERYSRSSTSLIP 1008
+ + + E+G+ +RKAA +L LI++ + + +P
Sbjct: 594 ADVALKELTENGTDRAKRKAASLLELIQQTEGVAVTTVP 632
Score = 87 (35.7 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 47/214 (21%), Positives = 94/214 (43%)
Query: 578 NRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSSDGIKFLVDEKGNRLELEPIV 637
NR I+ AG IP ++EL+ SS P + +L ++G K + + G +
Sbjct: 379 NRVCIAEAGAIPLLVELL-SSPDPRTQEHSVTALLNLSINEGNKGAIVDAG-------AI 430
Query: 638 TNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVXXXXXXXXXXXXEVR 697
T+++ + +N S R+ A LF + S + K+A+ A + +
Sbjct: 431 TDIVEVLKN--GSMEARENAAATLFSL--SVIDENKVAIGAAGAIQALISLLEEGTRRGK 486
Query: 698 EIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELS 757
+ A +F ++ G +K ++ L L+ DA + A +LA L ++
Sbjct: 487 KDAATAIFNLCIYQ--GNKSRAVKGGIVDPLTRLLK-DAGGGMVDEALAILAILSTNQEG 543
Query: 758 LTMKLIELDGLNAIINILKSGTMEAKENALSALF 791
T + E + + ++ I+++G+ +ENA + L+
Sbjct: 544 KTA-IAEAESIPVLVEIIRTGSPRNRENAAAILW 576
Score = 79 (32.9 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 43/179 (24%), Positives = 75/179 (41%)
Query: 657 ALRALFRICKSEAELVKIAVVKANGVXXXXXXXXXXXXEVREIAINLLFLFSHHEPEGVV 716
++ AL + +E K A+V A + E RE A LF S + V
Sbjct: 407 SVTALLNLSINEGN--KGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVA 464
Query: 717 EYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLP--KSELSLTMKLIELDGLNAIINI 774
+ ++AL+ LE + + AA + NL + S +K +D L ++
Sbjct: 465 --IGAAGAIQALISLLEEGTRRGKKDAATAIF-NLCIYQGNKSRAVKGGIVDPLTRLLKD 521
Query: 775 LKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAAALI 833
G ++ AL+ L + TN E + + E P+LV +++ GS + AAA++
Sbjct: 522 AGGGMVD---EALAILAILS--TNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAIL 575
Score = 73 (30.8 bits), Expect = 9.8e-10, Sum P(3) = 9.8e-10
Identities = 23/98 (23%), Positives = 42/98 (42%)
Query: 460 QCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAES 519
+ I LV L+ P + E + L L ++E N +G +++ + G+
Sbjct: 385 EAGAIPLLVELLSSPDPRTQEHSVTALLNL-SINEGNKGAIVDAGAITDIVEVLKNGSME 443
Query: 520 SRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSG 557
+R L S+ ++D N +G G I L+ L+ G
Sbjct: 444 ARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEG 481
Score = 72 (30.4 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 25/115 (21%), Positives = 55/115 (47%)
Query: 38 VLSKHLFDIESVLKELQLQKLNDSQAVRLALESLEADVEKANNLVEKYKNKSRFYLLVKC 97
+LS ++ V EL+ ++ +A+R+AL+S +E L S+ + L
Sbjct: 46 LLSPFFEELIDVNVELKKDQITGFEAMRIALDS---SLE----LFRSVNGGSKLFQLFDR 98
Query: 98 RYIVNEIQEVTRNIGRSLASLSLANTEVLSEISDQMNRLQNEMQRVEFKASQSQI 152
+V + +++T I +L+ + EV E+ +Q+ L + +R + + +S +
Sbjct: 99 DSLVEKFRDMTVEIEAALSQIPYEKIEVSEEVREQVQLLHFQFKRAKERWEESDL 153
Score = 64 (27.6 bits), Expect = 7.9e-09, Sum P(3) = 7.9e-09
Identities = 24/132 (18%), Positives = 55/132 (41%)
Query: 464 ILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSRIL 523
+L L+ + E A L+ L + +N A++G L++ + ++
Sbjct: 347 VLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEH 406
Query: 524 MMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXGCSKNRELIS 583
+ ALL++ + + N + G I ++ ++ +G+ + +N+ I
Sbjct: 407 SVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIG 466
Query: 584 AAGGIPQVLELM 595
AAG I ++ L+
Sbjct: 467 AAGAIQALISLL 478
Score = 57 (25.1 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 770 AIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLL 818
+++ L +GT E + A L R N++ + + E G PLLV LL
Sbjct: 349 SLLEKLANGTTEQQRAAAGEL-RLLAKRNVDNRVCIAEAGAIPLLVELL 396
Score = 42 (19.8 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 161 RDQKLDQGFANDMLEEIARAVG-VPVEPSEISKEL 194
RD +++ F DM EI A+ +P E E+S+E+
Sbjct: 98 RDSLVEK-F-RDMTVEIEAALSQIPYEKIEVSEEV 130
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 158 (60.7 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 57/252 (22%), Positives = 106/252 (42%)
Query: 78 ANNLVEKYKNKSRFYLLVKCRYIVNEIQEVTRNIGRSLASLSLANTEVLSEISDQMNRLQ 137
A L+E N S+ Y+ + ++ + + R L + + D+++ L
Sbjct: 117 AKKLLETCSNGSKIYMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLC 176
Query: 138 NEMQRVEFKASQSQIVDKLNQGLRDQKLDQGFAND-MLEEIARAVGVPVEPSEISKELAS 196
++++ + + I ++ + K D A+ ++E +A+ + E I +L +
Sbjct: 177 KQLKKAKRRTDTQDIELAVDMMVVFSKTDPRNADSAIIERLAKKL----ELQTID-DLKT 231
Query: 197 FXXXXXXXXXXXXXXXVLFLDQVIELLSRADAARDYEEVKKQYFQRLQIIERYDSRENYI 256
+ +IELL++ + E Y Q + I + + I
Sbjct: 232 ETIAIQSLIQDKGGLNIETKQHIIELLNKFKKLQGLEATDILY-QPV-INKAITKSTSLI 289
Query: 257 QPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSP 316
P + F C IT +M+DPV + TG T E+ +I+ W D KT P+T L+ SL N
Sbjct: 290 LP-HEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFA 348
Query: 317 LRQSIEEWKELN 328
L+ I +W E N
Sbjct: 349 LKNLIMQWCEKN 360
Score = 101 (40.6 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 68/278 (24%), Positives = 117/278 (42%)
Query: 695 EVREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKS 754
E + ++ + L + PE V + + LV L +Q A L NL
Sbjct: 394 EEQRRSVKQMRLLARENPENRV-LIANAGAIPLLVQLLSYPDS-GIQENAVTTLLNLSID 451
Query: 755 ELSLTMKLIELDG-LNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVV--ERGVY 811
E++ KLI +G + II IL++G EA+EN+ +ALF + L+ + + G+
Sbjct: 452 EVN--KKLISNEGAIPNIIEILENGNREARENSAAALFSLS---MLDENKVTIGLSNGIP 506
Query: 812 PLLVNLLQIGSITAKARAAALIGTLSTSSPKFTDMPESAGCWCFRPSRAHLCQVHGGICS 871
PL V+LLQ G++ K A + LS +S AG +P L + G+
Sbjct: 507 PL-VDLLQHGTLRGKKDALTALFNLSLNSAN-KGRAIDAGI--VQPLLNLLKDKNLGMID 562
Query: 872 ESTSFCLLKAN---------ALPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRGVNVL 922
E+ S LL A+ L + L++ T S L++ G +
Sbjct: 563 EALSILLLLASHPEGRQAIGQLSFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILA 622
Query: 923 HQEEAIKPTL-EILTWGTDSLKEEALGFLEKVFMSKEM 959
+ + L EI T GT+ + +A ++ + S+++
Sbjct: 623 ALQFGVYEYLVEITTSGTNRAQRKANALIQLISKSEQI 660
Score = 99 (39.9 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 54/235 (22%), Positives = 100/235 (42%)
Query: 609 SEILEKLSSDGIKFLVDEKGNRL-ELEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKS 667
S I E + + +DE +L E + N++ + +N N R+ + ALF +
Sbjct: 435 SGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNRE--ARENSAAALFSLSML 492
Query: 668 EAELVKIAVVKANGVXXXXXXXXXXXXEVREIAINLLF---LFSHHEPEGVVEYLLKPKR 724
+ V I + +NG+ ++ A+ LF L S ++ + +++P
Sbjct: 493 DENKVTIGL--SNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPL- 549
Query: 725 LEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKE 784
L L +N D ++ LLA+ P+ ++ +L + ++ ++ GT + KE
Sbjct: 550 LNLLKD--KNLGMIDEALSILLLLASHPEGRQAIG----QLSFIETLVEFIRQGTPKNKE 603
Query: 785 NALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAAALIGTLSTS 839
A S L N ++ GVY LV + G+ A+ +A ALI +S S
Sbjct: 604 CATSVLLELGS-NNSSFILAALQFGVYEYLVEITTSGTNRAQRKANALIQLISKS 657
Score = 93 (37.8 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 29/139 (20%), Positives = 64/139 (46%)
Query: 458 SQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGA 517
++Q + LV + E + K ++ L + EN A +G PL+ +++
Sbjct: 375 NEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAI-PLLVQLLSYP 433
Query: 518 ESS-RILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXGCS 576
+S + + LL++ + + N +L+ EG IP ++ ++ +GN +
Sbjct: 434 DSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLD 493
Query: 577 KNRELISAAGGIPQVLELM 595
+N+ I + GIP +++L+
Sbjct: 494 ENKVTIGLSNGIPPLVDLL 512
Score = 88 (36.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 41/163 (25%), Positives = 64/163 (39%)
Query: 455 RKLSQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRII 514
R L I LV L+ P E A L L +DE N + G +I+ +
Sbjct: 414 RVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNL-SIDEVNKKLISNEGAIPNIIEILE 472
Query: 515 QGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXG 574
G +R AL S+ ++D N +G IPPL+ L+ G +
Sbjct: 473 NGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSL 532
Query: 575 CSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSS 617
S N+ AG + +L L+ ++ +I + IL L+S
Sbjct: 533 NSANKGRAIDAGIVQPLLNLLKDKNL--GMIDEALSILLLLAS 573
Score = 65 (27.9 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 57/275 (20%), Positives = 101/275 (36%)
Query: 751 LPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGV 810
+P+ E+S + + D ++ ++ L S +E + ++ + R N E + + G
Sbjct: 364 IPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQM-RLLARENPENRVLIANAGA 422
Query: 811 YPLLVNLLQIGSITAKARAAALIGTLSTSS------------PKFTDMPESAGCWCFRPS 858
PLLV LL + A + LS P ++ E+ S
Sbjct: 423 IPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENS 482
Query: 859 RAHLCQVHGGICSESTSFCLLKANALPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRG 918
A L + + E+ L +N +P LV LLQ H T L+ L
Sbjct: 483 AAALFSL--SMLDENKVTIGL-SNGIPPLVDLLQ---HGTLRGKKDALTALFNLSLNSAN 536
Query: 919 VNVLHQEEAIKPTLEILTWGTDSLKEEALGFLEKVFMSKEMVDTYGSSARLLLVPLTSRN 978
++P L +L + +EAL L + E G +L +
Sbjct: 537 KGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAIG---QLSFIETLVEF 593
Query: 979 VHEDGSLERKAAKVLSLIERYSRSSTSLIPGL-FG 1012
+ + G+ + K L+E S +S+ ++ L FG
Sbjct: 594 IRQ-GTPKNKECATSVLLELGSNNSSFILAALQFG 627
Score = 59 (25.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 31/138 (22%), Positives = 61/138 (44%)
Query: 405 HARNKEKVIDYGGWDHIVPCLGRDPSISLA--AVKLLYELMQDRSGWNVAVCRKLSQQCS 462
++ NK + ID G ++ L +D ++ + A+ +L L G R+ Q S
Sbjct: 533 NSANKGRAIDAGIVQPLLNLL-KDKNLGMIDEALSILLLLASHPEG------RQAIGQLS 585
Query: 463 GILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSRI 522
I LV I+ ++ ECA +L +L + A + G Y+ L++ G ++
Sbjct: 586 FIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQ- 644
Query: 523 LMMKALLSMELVDSNLEL 540
KA ++L+ + ++
Sbjct: 645 --RKANALIQLISKSEQI 660
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 135 (52.6 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 72/318 (22%), Positives = 133/318 (41%)
Query: 481 CAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSRILMMKAL--LSMELVDSNL 538
CAE ++Q + + L+ R+ + R + + LS D+ +
Sbjct: 308 CAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRI 367
Query: 539 ELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXGCSKNRELISAAGGIPQVLELMFSS 598
L+ + G IP L+ L+ S + N+ELI AG + +++++ +
Sbjct: 368 -LIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAG 426
Query: 599 HVPSNIIVKCSEILEKLS-SDGIKFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPA 657
+ + + L LS +D K ++ G P + +LL N + +K A
Sbjct: 427 TMEAR--ENAAATLFSLSLADENKIIIGGSG----AIPALVDLLE-----NGTPRGKKDA 475
Query: 658 LRALFRICKSEAELVKIAVVKANGVXXXXXXXXXXXXEVREI--AINLLFLFSHHEPEGV 715
ALF +C K V+A G+ R + A+ +L + ++++
Sbjct: 476 ATALFNLCIYHGN--KGRAVRA-GIVTALVKMLSDSTRHRMVDEALTILSVLANNQD--A 530
Query: 716 VEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINIL 775
++K L AL+G L+ D + + AAA +L +L K + T KLI + L A++ ++
Sbjct: 531 KSAIVKANTLPALIGILQTDQTRNRENAAA-ILLSLCKRD---TEKLITIGRLGAVVPLM 586
Query: 776 ---KSGTMEAKENALSAL 790
K+GT K A+S L
Sbjct: 587 DLSKNGTERGKRKAISLL 604
Score = 115 (45.5 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F C ++ +M DPV + TG T ERA I+ W+D T P+T LE+ +L N LR I
Sbjct: 245 FLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLI 304
Query: 322 EEW 324
W
Sbjct: 305 SRW 307
Score = 105 (42.0 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 53/204 (25%), Positives = 91/204 (44%)
Query: 761 KLIELDG-LNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVV--ERGVYPLLVNL 817
+LI G + +I+ +L++GTMEA+ENA + LF + L + ++ G P LV+L
Sbjct: 408 ELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLS----LADENKIIIGGSGAIPALVDL 463
Query: 818 LQIGSITAKARAA-ALIGTLSTSSPKFTDMPE---SAGCWCFRPSRAH-LCQVHGGICS- 871
L+ G+ K AA AL K + +A S H + I S
Sbjct: 464 LENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSV 523
Query: 872 ----ESTSFCLLKANALPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRGVNVLHQEEA 927
+ ++KAN LP L+ +LQ A L +L + ++ + + + A
Sbjct: 524 LANNQDAKSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEK--LITIGRLGA 581
Query: 928 IKPTLEILTWGTDSLKEEALGFLE 951
+ P +++ GT+ K +A+ LE
Sbjct: 582 VVPLMDLSKNGTERGKRKAISLLE 605
Score = 76 (31.8 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 47/261 (18%), Positives = 102/261 (39%)
Query: 456 KLSQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQ 515
K S S I LV + E A ++ L +N A++G L++ +
Sbjct: 325 KNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTS 384
Query: 516 GAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXGC 575
+++ + +L++ + ++N EL+ G + ++ ++ +G +
Sbjct: 385 EDVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLA 444
Query: 576 SKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSSDGIKFLVDEKGNRLELEP 635
+N+ +I +G IP +++L+ + P + + G KG +
Sbjct: 445 DENKIIIGGSGAIPALVDLL-ENGTPRGKKDAATALFNLCIYHG------NKGRAVRAG- 496
Query: 636 IVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVXXXXXXXXXXXXE 695
IVT L+ + + ++ + + AL L + ++ K A+VKAN +
Sbjct: 497 IVTALVKMLSD-STRHRMVDEALTILSVLANNQD--AKSAIVKANTLPALIGILQTDQTR 553
Query: 696 VREIAINLLFLFSHHEPEGVV 716
RE A +L + E ++
Sbjct: 554 NRENAAAILLSLCKRDTEKLI 574
Score = 73 (30.8 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 55/246 (22%), Positives = 96/246 (39%)
Query: 764 ELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSI 823
++ + A++ L S + E + NA+S + R + + + + E G P+LVNLL +
Sbjct: 329 DMSVIRALVQRLSSRSTEDRRNAVSEI-RSLSKRSTDNRILIAEAGAIPVLVNLLTSEDV 387
Query: 824 TAKARAAALIGTLST-SSPKFTDMPESAGCWCFRPSRAHLCQVHGGICSESTSFCLLKAN 882
+ A + LS + K M A + RA + + S L N
Sbjct: 388 ATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADEN 447
Query: 883 --------ALPHLVKLLQGRVHATAYEAIQTLSTL-VQEGCQQRGVNVLHQEEAIKPTLE 933
A+P LV LL+ +A L L + G + R V + ++
Sbjct: 448 KIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRA----GIVTALVK 503
Query: 934 ILTWGT-DSLKEEALGFLEKVFMSKEMVDTYGSSARLLLVPLTSRNVHEDGSLERKAAKV 992
+L+ T + +EAL L V + + + A L + + + E AA +
Sbjct: 504 MLSDSTRHRMVDEALTILS-VLANNQDAKSAIVKANTLPALIGILQTDQTRNRENAAAIL 562
Query: 993 LSLIER 998
LSL +R
Sbjct: 563 LSLCKR 568
Score = 39 (18.8 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 58 LNDSQAVRLALE-SLEADVEKANNLVEKYKNKSR 90
L S ++ LA S +AD ++ + +V K ++S+
Sbjct: 201 LRRSSSISLAYYLSKDADTDRLDKMVNKNTDESK 234
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 125 (49.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 65/286 (22%), Positives = 117/286 (40%)
Query: 45 DIESVLKELQLQKLNDSQAVRLALESLEADVEKANNLVEKYKNKSRFYLLVKCR-YIVNE 103
DI ++K + L+ L DS A E L E+ V++ + + + + + R + V
Sbjct: 43 DIGKLIKPV-LENLIDSDAA--PSELLNNGFEELAQYVDELREQFQSWQPLSTRIFYVLR 99
Query: 104 IQEVTRNIGRSLASLSLANTEVLSEI-SDQMNRLQNEMQRVEFKASQSQIVDKLNQGLRD 162
I+ + + S + + +D ++ E + ++ +I ++Q L+D
Sbjct: 100 IESLASKLRESSLEVFQLLKHCEQHLPADLISPSFEECIELVKLVARDEISYTIDQALKD 159
Query: 163 QKLDQGFANDMLEEIARAVGVPVEPSEISKELASFXXXXXXXXXXXXXXXVLFLDQVIEL 222
QK G +++L +IA + G+ EI E +LD +I L
Sbjct: 160 QKKGVGPTSEVLVKIAESTGLRSN-QEILVEGVVLTNMKEDAELTDNDTEAEYLDGLISL 218
Query: 223 LSRADAARDYEEVKKQYFQRLQIIERYDSRENYIQPLNAFKCRITGTVMMDPVSLYTGTT 282
++ +Y KQ R + R S F+C ++ +M DPV + +G T
Sbjct: 219 TTQM---HEYLSDIKQAQLRCPV--RVPSD---------FRCSLSLELMTDPVIVASGQT 264
Query: 283 CERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSIEEWKELN 328
ER I+ W+D P+T L T+L N +R + W E N
Sbjct: 265 FERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVRAFLASWCETN 310
Score = 118 (46.6 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 56/255 (21%), Positives = 105/255 (41%)
Query: 460 QCSGILFLVTLIKGP-VRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQG-A 517
+C I LV+L+ R A+ +L +++ N A+SG PLI + G
Sbjct: 461 RCEAIPSLVSLLYSTDERIQADAVTCLLN--LSINDNNKSLIAESGAIVPLIHVLKTGYL 518
Query: 518 ESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXGCSK 577
E ++ L S+ +++ +G+ G I PL+ L+GSG+ +
Sbjct: 519 EEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHE 578
Query: 578 NRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSS--DGIKFLVDEKGNRLELEP 635
N+ + AG + ++ELM + ++ K +L L++ +G K + E+G P
Sbjct: 579 NKTKVIEAGAVRYLVELMDPAF---GMVEKAVVVLANLATVREG-KIAIGEEGGI----P 630
Query: 636 IVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVXXXXXXXXXXXXE 695
++ ++ L S ++ A AL ++C + V++ +
Sbjct: 631 VLVEVVEL-----GSARGKENATAALLQLCTHSPKFCN-NVIREGVIPPLVALTKSGTAR 684
Query: 696 VREIAINLLFLFSHH 710
+E A NLL F H
Sbjct: 685 GKEKAQNLLKYFKAH 699
Score = 90 (36.7 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 37/137 (27%), Positives = 65/137 (47%)
Query: 697 REIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSEL 756
++ A L L HHE + V ++ + LV ++ A V+ A +LANL
Sbjct: 564 KDAATALFNLSIHHENKTKV---IEAGAVRYLVELMD-PAFGMVEKAVV-VLANLATVRE 618
Query: 757 SLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVN 816
+ + E G+ ++ +++ G+ KENA +AL + + + NV+ GV P LV
Sbjct: 619 G-KIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSP-KFCNNVIREGVIPPLVA 676
Query: 817 LLQIGSITAKARAAALI 833
L + G+ K +A L+
Sbjct: 677 LTKSGTARGKEKAQNLL 693
Score = 88 (36.0 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 59/296 (19%), Positives = 117/296 (39%)
Query: 624 VDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVX 683
V E G+ +E V L+ ++ SS + ++ A A RI + +I + + +
Sbjct: 410 VRETGSSSSIETEVKKLIDDLKS--SSLDTQREAT-ARIRILARNSTDNRIVIARCEAIP 466
Query: 684 XXXXXXXXXXXEVREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMA 743
++ A+ L S ++ + + + + L+ L+ + +
Sbjct: 467 SLVSLLYSTDERIQADAVTCLLNLSINDNNKSL--IAESGAIVPLIHVLKTGYLEEAKAN 524
Query: 744 AAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQR 803
+A L +L E T ++ E + ++++L SG++ K++A +ALF + + E +
Sbjct: 525 SAATLFSLSVIEEYKT-EIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLS--IHHENKT 581
Query: 804 NVVERGVYPLLVNLLQ--IGSITAKARAAALIGTLSTSS---------PKFTDMPESAGC 852
V+E G LV L+ G + A + T+ P ++ E
Sbjct: 582 KVIEAGAVRYLVELMDPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSA 641
Query: 853 WCFRPSRAHLCQVHGGICSESTSFC--LLKANALPHLVKLLQGRVHATAYEAIQTL 906
+ A L Q +C+ S FC +++ +P LV L + A E Q L
Sbjct: 642 RGKENATAALLQ----LCTHSPKFCNNVIREGVIPPLVALTKSGT-ARGKEKAQNL 692
Score = 68 (29.0 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 61/289 (21%), Positives = 112/289 (38%)
Query: 507 KPLIDRIIQGA-ESSRILMMKA-LLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXX 564
K LID + + ++ R + +L+ D+ + + E I P L+ L+ S + +
Sbjct: 424 KKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAI-PSLVSLLYSTDERIQAD 482
Query: 565 XXXXXXXXXGCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSSDGIKFLV 624
N+ LI+ +G I ++ ++ + ++ K + S I+
Sbjct: 483 AVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEE---AKANSAATLFSLSVIEEYK 539
Query: 625 DEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVXX 684
E G +EP+V +LL + S + +K A ALF + K V++A V
Sbjct: 540 TEIGEAGAIEPLV-DLLG-----SGSLSGKKDAATALFNLSIHHENKTK--VIEAGAVRY 591
Query: 685 XXXXXXXXXXEVREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAA 744
V + + L L + E G + + + + LV +E + + A
Sbjct: 592 LVELMDPAFGMVEKAVVVLANLATVRE--GKIA-IGEEGGIPVLVEVVELGSARGKENAT 648
Query: 745 AGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRF 793
A LL S +I + ++ + KSGT KE A + L F
Sbjct: 649 AALLQLCTHSP-KFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYF 696
Score = 65 (27.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 405 HARNKEKVIDYGGWDHIVPCLGRDPSISLA--AVKLLYELMQDRSGWNVAVCRKLSQQCS 462
H NK KVI+ G ++V + DP+ + AV +L L R G +A+ +
Sbjct: 576 HHENKTKVIEAGAVRYLVELM--DPAFGMVEKAVVVLANLATVREG-KIAIGEE-----G 627
Query: 463 GILFLVTLIK-GPVRESAECAEKILQQLFDVDEENFCR-AAKSGWYKPLI 510
GI LV +++ G R E A L QL FC + G PL+
Sbjct: 628 GIPVLVEVVELGSAR-GKENATAALLQLC-THSPKFCNNVIREGVIPPLV 675
Score = 62 (26.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 28/141 (19%), Positives = 56/141 (39%)
Query: 455 RKLSQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRII 514
+ L + I+ L+ ++K E A+ V EE ++G +PL+D +
Sbjct: 497 KSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLG 556
Query: 515 QGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXG 574
G+ S + AL ++ + N + + G + L+ L+ F
Sbjct: 557 SGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPA-FGMVEKAVVVLANLAT 615
Query: 575 CSKNRELISAAGGIPQVLELM 595
+ + I GGIP ++E++
Sbjct: 616 VREGKIAIGEEGGIPVLVEVV 636
Score = 58 (25.5 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 40/190 (21%), Positives = 71/190 (37%)
Query: 821 GSITAKARAAALIGTLSTSSPKFTDMPESAGCWCFRPSRAHLCQVHGGICSESTSFCLLK 880
G I A R ++ T K D +S+ R + A + + S + +
Sbjct: 404 GIIPATVRETGSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARN--STDNRIVIAR 461
Query: 881 ANALPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRGVNVLHQEEAIKPTLEILTWG-T 939
A+P LV LL +A+ L L +++ + AI P + +L G
Sbjct: 462 CEAIPSLVSLLYSTDERIQADAVTCLLNL---SINDNNKSLIAESGAIVPLIHVLKTGYL 518
Query: 940 DSLKEEALGFLEKVFMSKEMVDTYGSSARLLLVPLTSRNVHEDGSLERK--AAKVLSLIE 997
+ K + L + + +E G + + PL ++ GSL K AA L +
Sbjct: 519 EEAKANSAATLFSLSVIEEYKTEIGEAGAI--EPLV--DLLGSGSLSGKKDAATALFNLS 574
Query: 998 RYSRSSTSLI 1007
+ + T +I
Sbjct: 575 IHHENKTKVI 584
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 133 (51.9 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 52/203 (25%), Positives = 91/203 (44%)
Query: 127 SEISDQMNRLQNEMQRVEFK-ASQSQIVDKLNQGLRDQKLDQGFANDMLEEIARAVGVPV 185
+ + D+++ E + K S +I ++ LRDQ+ G + ++L +I G+
Sbjct: 117 NHLPDELSPASLEQCLEKIKHLSYEEISSVIDGALRDQRDGVGPSPEILVKIGENTGLRS 176
Query: 186 EPSEISKELASFXXXXXXXXXXXXXXXVLFLDQVIELLSRADAARDYEEVKKQYFQRLQI 245
EI E + V FLDQ+I +++R +RL +
Sbjct: 177 N-QEILIEAVALERQKEMAEQSENNAEVEFLDQLIVIVNRMH-------------ERLLL 222
Query: 246 IERYDSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVV 305
I++ ++ + + L F C ++ VM DPV + +G T E+A I+ W+D K P+T
Sbjct: 223 IKQ--TQTSSVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQT 280
Query: 306 LEDTSLRSNSPLRQSIEEWKELN 328
L T+L N ++ I W E N
Sbjct: 281 LTHTTLIPNYTVKALIANWCETN 303
Score = 109 (43.4 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 41/178 (23%), Positives = 82/178 (46%)
Query: 462 SG-ILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESS 520
SG I+ LV L+ + E A L L +++ N A +G +PLI + G+ +
Sbjct: 585 SGAIVLLVELLYSTDSATQENAVTALLNL-SINDNNKKAIADAGAIEPLIHVLENGSSEA 643
Query: 521 RILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXGCSKNRE 580
+ L S+ +++ N +G+ G I PL+ L+G+G + +N+
Sbjct: 644 KENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKA 703
Query: 581 LISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSS--DGIKFLVDEKGNRLELEPI 636
+I +G + +++LM + + ++ K +L L++ +G + E G L +E +
Sbjct: 704 MIVQSGAVRYLIDLMDPA---AGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVV 758
Score = 99 (39.9 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 44/188 (23%), Positives = 83/188 (44%)
Query: 648 NSSYNVRKPALRALFRICKSEAELVKIAVVKANGVXXXXXXXXXXXXEVREIAINLLFLF 707
N S ++ + LF + E +KI A G + ++ A L L
Sbjct: 638 NGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGK-KDAATALFNLS 696
Query: 708 SHHEPEGVVEYLLKPKRLEALVGFLENDAKH-DVQMAAAGLLANLPKSELSLTMKLIELD 766
H E + ++ ++ + L+ ++ A D +A LA +P+ ++ +
Sbjct: 697 IHQENKAMI---VQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPEGRNAIGQE----G 749
Query: 767 GLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVV-ERGVYPLLVNLLQIGSITA 825
G+ ++ +++ G+ KENA +AL + + TN N+V + G P LV L Q G+ A
Sbjct: 750 GIPLLVEVVELGSARGKENAAAALLQLS--TNSGRFCNMVLQEGAVPPLVALSQSGTPRA 807
Query: 826 KARAAALI 833
+ +A AL+
Sbjct: 808 REKAQALL 815
Score = 96 (38.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 48/218 (22%), Positives = 96/218 (44%)
Query: 629 NRLELEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVXXXXXX 688
NR+ + +L ++ +++ ++ A+ AL + ++ K A+ A +
Sbjct: 578 NRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNN--KKAIADAGAIEPLIHV 635
Query: 689 XXXXXXEVREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLL 748
E +E + LF S E E ++ + + + LV L N + AA L
Sbjct: 636 LENGSSEAKENSAATLFSLSVIE-ENKIK-IGQSGAIGPLVDLLGNGTPRGKKDAATALF 693
Query: 749 ANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVER 808
NL + + M +++ + +I+++ + A++ L T E + + +
Sbjct: 694 -NLSIHQENKAM-IVQSGAVRYLIDLMDPAAGMV-DKAVAVLANLA--TIPEGRNAIGQE 748
Query: 809 GVYPLLVNLLQIGSITAKARAAALIGTLSTSSPKFTDM 846
G PLLV ++++GS K AAA + LST+S +F +M
Sbjct: 749 GGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNM 786
Score = 80 (33.2 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 28/114 (24%), Positives = 56/114 (49%)
Query: 724 RLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAK 783
+++ LV L++ + D Q A L L K + + + + ++ +L S +
Sbjct: 545 QVKKLVEELKSSSL-DTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQ 603
Query: 784 ENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAAALIGTLS 837
ENA++AL + N ++ + + G L+++L+ GS AK +AA + +LS
Sbjct: 604 ENAVTALLNLS--INDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLS 655
Score = 77 (32.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 28/141 (19%), Positives = 63/141 (44%)
Query: 455 RKLSQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRII 514
R LS+ + + LV +K ++ A L+ L + +N SG L++ +
Sbjct: 537 RDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLY 596
Query: 515 QGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXG 574
+++ + ALL++ + D+N + + G I PL+ ++ +G+ +
Sbjct: 597 STDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSV 656
Query: 575 CSKNRELISAAGGIPQVLELM 595
+N+ I +G I +++L+
Sbjct: 657 IEENKIKIGQSGAIGPLVDLL 677
Score = 61 (26.5 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 35/153 (22%), Positives = 60/153 (39%)
Query: 408 NKEKVIDYGGWDHIVPCLGRD-PSISLAAVKLLYELMQDRSGWNVAVCRKLSQQCSGILF 466
NK K+ G +V LG P A L+ L + + V Q + +
Sbjct: 660 NKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIV------QSGAVRY 713
Query: 467 LVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQ-GAESSRILMM 525
L+ L+ P + A +L L + E + G PL+ +++ G+ +
Sbjct: 714 LIDLMD-PAAGMVDKAVAVLANLATIPEGRNAIGQEGGI--PLLVEVVELGSARGKENAA 770
Query: 526 KALLSMELVDSNL-ELLGKEGIIPPLLGLVGSG 557
ALL + ++ +EG +PPL+ L SG
Sbjct: 771 AALLQLSTNSGRFCNMVLQEGAVPPLVALSQSG 803
Score = 58 (25.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 46/175 (26%), Positives = 70/175 (40%)
Query: 825 AKARAAALIGTLSTSSPKFTDMPESAGCWCFRPSRAHLCQVHGGICSESTSFCLLKANAL 884
A +AA LS SPKF D W RPS ++ +E+ +
Sbjct: 488 AATTSAATRRDLSDFSPKFMDRRTRGQFWR-RPSERLGSRIVSAPSNETRRDLSEVETQV 546
Query: 885 PHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRGVNVLHQEEAIKPTLEILTWGTDSLKE 944
LV+ L+ T +A L L + R V+ AI +E+L + TDS +
Sbjct: 547 KKLVEELKSSSLDTQRQATAELRLLAKHNMDNR--IVIGNSGAIVLLVELL-YSTDSATQ 603
Query: 945 E-ALGFLEKVFMSKEMVDTYGSSARLLLVPLTSRNVHEDGSLERK---AAKVLSL 995
E A+ L + ++ + + PL +V E+GS E K AA + SL
Sbjct: 604 ENAVTALLNLSINDNNKKAIADAGAI--EPLI--HVLENGSSEAKENSAATLFSL 654
Score = 52 (23.4 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 21/89 (23%), Positives = 35/89 (39%)
Query: 881 ANALPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRGVNVLHQEEAIKPTLEILTWGTD 940
+ A+ LV+LL AT A+ L L + AI+P + +L G+
Sbjct: 585 SGAIVLLVELLYSTDSATQENAVTALLNL---SINDNNKKAIADAGAIEPLIHVLENGSS 641
Query: 941 SLKEEALGFLEKVFMSKEMVDTYGSSARL 969
KE + L + + +E G S +
Sbjct: 642 EAKENSAATLFSLSVIEENKIKIGQSGAI 670
Score = 52 (23.4 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 63/300 (21%), Positives = 119/300 (39%)
Query: 510 IDRIIQGAESSRI-LMMKALLSMELVDS-NLE---LLGKEGIIPPLLGLVGSGNFQXXXX 564
+ ++++ +SS + +A + L+ N++ ++G G I L+ L+ S +
Sbjct: 546 VKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQEN 605
Query: 565 XXXXXXXXXGCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSS-DGIKFL 623
N++ I+ AG I ++ ++ + S + L LS + K
Sbjct: 606 AVTALLNLSINDNNKKAIADAGAIEPLIHVLENGS--SEAKENSAATLFSLSVIEENKIK 663
Query: 624 VDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVX 683
+ + G + P+V +LL N + +K A ALF + + K +V++ V
Sbjct: 664 IGQSG---AIGPLV-DLLG-----NGTPRGKKDAATALFNLSIHQEN--KAMIVQSGAVR 712
Query: 684 XXXXXXXXXXXEVREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMA 743
V + L L + PEG + + + LV +E + + A
Sbjct: 713 YLIDLMDPAAGMVDKAVAVLANLATI--PEGR-NAIGQEGGIPLLVEVVELGSARGKENA 769
Query: 744 AAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQR 803
AA LL S M L E + ++ + +SGT A+E A + L F + + A R
Sbjct: 770 AAALLQLSTNSGRFCNMVLQE-GAVPPLVALSQSGTPRAREKAQALLSYFRNQRHGNAGR 828
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 124 (48.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 74/334 (22%), Positives = 128/334 (38%)
Query: 7 PIGTILAVLTNQVIKTAQ---AAKNVVYEKESFKVLSKHLFDIESVLKELQLQKLND--- 60
P G A L V A A ++ + L++ L + ++L+ + L
Sbjct: 34 PTGLAGATLLRAVASLAASLVAGARPPSQRRNVDALARRLALLSAILESILLDTAAAGAF 93
Query: 61 SQAVRLALESLEADVEKANNLVEKYKNKSRFYLLVKCRYIVNEIQEVTRNIGRSL----- 115
S A L L + +A LV + R + L++ ++ +++ + L
Sbjct: 94 SDAANLCFRELYVVLFRAELLVSYVASAGRAWALLRSPHLAASFRDLDAELAVVLDVLPA 153
Query: 116 ASLSLAN--TEVLSEISDQMN-RLQNEMQRVEFKASQSQIVDKLNQGLRDQKLDQGFAND 172
ASL L++ T +L + R + + A + +++D L Q Q D
Sbjct: 154 ASLRLSHDATGLLDLLRAHCRCRAPAQYHDPDEAALRERLMDALRQFDLGQPPDHPSLQS 213
Query: 173 MLEE--IARAVGVPVEPSEISKELASFXXXXXXXXXXXXXXXVLFLDQVIELLSRADAAR 230
+L + I+ A E + +++ S + + + S A A R
Sbjct: 214 LLADMGISTAASCRAEIDYLEEQILSQEEDTDLPLVGSVLALLRYCLFAVFDPSNAKALR 273
Query: 231 DYEEVKKQYFQRLQIIERYDSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEA 290
D+ + QRL I D ++ P F C I+ +M DPV TG T +R +I
Sbjct: 274 DWPLSGNR--QRLLSIGGGDDT-SFSVP-KEFSCPISLDLMRDPVVASTGQTYDRPSIIQ 329
Query: 291 WLDRREKTDPETGVVLEDTSLRSNSPLRQSIEEW 324
W++ T P +G L D L N LR I +W
Sbjct: 330 WIEEGHSTCPNSGQTLADHRLVPNRALRSLISQW 363
Score = 114 (45.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 60/280 (21%), Positives = 115/280 (41%)
Query: 555 GSGNFQXXXXXXXXXXXXXGCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEK 614
GS N + G +NR I+ G IP + L+ S+ + + + + +
Sbjct: 411 GSENVKAVAAKEIRLLAKTG-KQNRAFIADLGAIPLLCRLLLSN----DWMAQENAVTAL 465
Query: 615 LSSDGIKFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKI 674
L+ + KG +E E + ++ + QN + ++ A LF + K+
Sbjct: 466 LN---LSIFEPNKGRIMEQEGCLRLIVGVLQN-GWTTEAKENAAATLFSLSVVH-NFKKL 520
Query: 675 AVVKANGVXXXXXXXXXXXXEVREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLEN 734
+ + V ++ A+ LF S H PE +L+ + AL+ L N
Sbjct: 521 IMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTH-PESSAR-MLESCAVVALIQSLRN 578
Query: 735 DAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFT 794
D V AAG LA L K + + + +++ +++ GT + KENA+SAL+
Sbjct: 579 DT---VSEEAAGALALLMKQPSIVHLVGSSETVITSLVGLMRRGTPKGKENAVSALYEIC 635
Query: 795 DPTNLEAQRNVVE-RGVYPLLVNLLQIGSITAKARAAALI 833
+ V + G+ ++ + G+ AK +A+ ++
Sbjct: 636 RRGGSALVQRVAKIPGLNTVIQTITLNGTKRAKKKASLIV 675
Score = 86 (35.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 728 LVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENAL 787
LV LE D +V+ AA + L K+ + +L + + +L S A+ENA+
Sbjct: 404 LVRMLE-DGSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQENAV 462
Query: 788 SALFRFT--DPTNLEAQRNVVERGVYPLLVNLLQIGSIT-AKARAAALIGTLS 837
+AL + +P R + + G L+V +LQ G T AK AAA + +LS
Sbjct: 463 TALLNLSIFEPNK---GRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLS 512
Score = 71 (30.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 56/249 (22%), Positives = 93/249 (37%)
Query: 771 IINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAA 830
++ +L+ G+ K A + R T + + + + G PLL LL A+ A
Sbjct: 404 LVRMLEDGSENVKAVAAKEI-RLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQENAV 462
Query: 831 ALIGTLSTSSPKFTDMPESAGCWCFRPSRAHLCQVHGGICSESTSFCLLKANALPHLVKL 890
+ LS P + E GC R L E+ + L + + + KL
Sbjct: 463 TALLNLSIFEPNKGRIMEQEGC--LRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKL 520
Query: 891 LQGRVHATAYEAIQTLSTLVQEGCQQRGV---NVLHQEEAIKPTLE-------ILTWGTD 940
+ A E L+ G + + N+ E+ LE I + D
Sbjct: 521 IMNEPGAVE-ELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAVVALIQSLRND 579
Query: 941 SLKEEALGFLEKVFMSKEMVDTYGSSARLL--LVPLTSRNVHEDGSLERKAAKVLSLIER 998
++ EEA G L + +V GSS ++ LV L R G+ + K V +L E
Sbjct: 580 TVSEEAAGALALLMKQPSIVHLVGSSETVITSLVGLMRR-----GTPKGKENAVSALYEI 634
Query: 999 YSRSSTSLI 1007
R ++L+
Sbjct: 635 CRRGGSALV 643
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 127 (49.8 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F+C IT +M DPV + TG T +R +I+ W+ T P+TG VL+ TSL N L+ I
Sbjct: 278 FRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALKNLI 337
Query: 322 EEW 324
W
Sbjct: 338 VLW 340
Score = 106 (42.4 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 70/272 (25%), Positives = 122/272 (44%)
Query: 728 LVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDG-LNAIINILKSG-TMEAKEN 785
LV +L + +Q+ A + NL E + T +++E DG LN +I +L+SG T EAK N
Sbjct: 414 LVRYLATECP-SLQINAVTTILNLSILEQNKT-RIMETDGALNGVIEVLRSGATWEAKAN 471
Query: 786 ALSALFRFTDPTNLEAQRNVVERG--VYPLLVNLLQIGSITAKARAAALIGTLSTSSP-- 841
A + LF + A R + R V LV+L + G ++K A I L
Sbjct: 472 AAATLFSLA---GVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRDALVAILNLVAERENV 528
Query: 842 -KFTD---MPESAGCWCFRPSRA-HLCQV---HGGICSESTSFCLLKANALPHLVKLLQG 893
+F + M + + P A + + GG+ + S +F L++ L ++++
Sbjct: 529 GRFVEAGVMGAAGDAFQELPEEAVAVVEAVVRRGGLMAVSAAFSLIRL-----LGEVMRE 583
Query: 894 RVHATAYEAIQTLSTLVQEGCQQRGVNVLHQEEAIKPTLEILTW-----GTDSLKEEALG 948
T A TL T+ C++ G ++ + AI P +E + W GT +A
Sbjct: 584 GADTTRESAAATLVTM----CRKGGSELVAEMAAI-PGIERVIWEMIGAGTARGGRKAAS 638
Query: 949 FLEKVFMSKEMV-DTYGSSARL--LLVPLTSR 977
+ ++ + DT+ ++A ++VP SR
Sbjct: 639 LMR--YLRRWAAGDTHNTAAETQSIVVPTPSR 668
Score = 61 (26.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 32/140 (22%), Positives = 56/140 (40%)
Query: 877 CLLKANALPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRGVNVLHQEEAIKPTLEILT 936
C+ +A A+P LV+ L + A+ T+ L +Q ++ + A+ +E+L
Sbjct: 404 CIAEAGAIPKLVRYLATECPSLQINAVTTILNL--SILEQNKTRIMETDGALNGVIEVLR 461
Query: 937 WG-TDSLKEEALGFLEKVFMSKEMVDTYGSSARLL--LVPLTSRNVHEDGSLERKA-AKV 992
G T K A L + G AR++ LV L + S +R A +
Sbjct: 462 SGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQG---PTSSKRDALVAI 518
Query: 993 LSLIERYSRSSTSLIPGLFG 1012
L+L+ + G+ G
Sbjct: 519 LNLVAERENVGRFVEAGVMG 538
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 123 (48.4 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 250 DSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDT 309
DSR I P + F+C I+ +M DPV + TG T ERA IE W+ T P T + +
Sbjct: 267 DSRPITI-P-DEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTS 324
Query: 310 SLRSNSPLRQSIEEWKELN 328
+L N LR I +W E N
Sbjct: 325 ALTPNYVLRSLISQWCETN 343
Score = 110 (43.8 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 60/271 (22%), Positives = 118/271 (43%)
Query: 741 QMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLE 800
Q +AA L L K + + + E + ++++L S + +E+A++AL + + +
Sbjct: 384 QRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNK 443
Query: 801 AQRNVVERGVYPLLVNLLQIGSITAKARAAALIGTLSTSSP-KFT-----DMPESA---G 851
A +++ G P +V++L+ GS+ A+ AAA + +LS K T +P G
Sbjct: 444 A--SIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLG 501
Query: 852 CWCFRPSRAHLCQVHGGICSESTSFCLLKANALPHLVKLLQGRVHATAYEAIQTLSTLVQ 911
R + + + ++A +P ++ L+ A EA+ LS L
Sbjct: 502 EGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSIL-- 559
Query: 912 EGCQQRGVNVLHQEEAIKPTLEILTWGTDSLKEEALGFLEKVFMSKE-MVDTYGSSARLL 970
G + E + +E++ GT +E A + + + +V + +
Sbjct: 560 -SSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGI 618
Query: 971 LVPLTSRNVHEDGSLERKAAKVLSLIERYSR 1001
+VPL R + +G+ +R K + L+ER SR
Sbjct: 619 MVPL--RELALNGT-DRGKRKAVQLLERMSR 646
Score = 95 (38.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 35/109 (32%), Positives = 53/109 (48%)
Query: 728 LVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENAL 787
L+ L + + A LL NL E + +I + +I+++LK+G+MEA+ENA
Sbjct: 414 LLSLLSSSDLRTQEHAVTALL-NLSIHEDNKA-SIISSGAVPSIVHVLKNGSMEARENAA 471
Query: 788 SALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAAALIGTL 836
+ LF + E + + G P LV LL GS K AAA + L
Sbjct: 472 ATLFSLSVID--EYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNL 518
Score = 88 (36.0 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 55/252 (21%), Positives = 102/252 (40%)
Query: 434 AAVKLLYELMQDRSGWNVAVCRKLSQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVD 493
AA +L L+ R+ N +C + I L++L+ + E A L L +
Sbjct: 387 AAAEL--RLLAKRNA-NNRIC---IAEAGAIPLLLSLLSSSDLRTQEHAVTALLNL-SIH 439
Query: 494 EENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGL 553
E+N SG ++ + G+ +R L S+ ++D +G G IP L+ L
Sbjct: 440 EDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVL 499
Query: 554 VGSGNFQXXXXXXXXXXXXXGCSKNRELISAAGGIPQVLELMFSSHVPSNIIV-KCSEIL 612
+G G+ + N+ AG +P ++ L+ + P+ ++ + IL
Sbjct: 500 LGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTN---PTGALMDEAMAIL 556
Query: 613 EKLSS--DGIKFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAE 670
LSS +G K + E P++ ++ + N R+ A + +C E
Sbjct: 557 SILSSHPEG-KAAI----GAAEPVPVLVEMI----GSGTPRN-RENAAAVMLHLCSGEHH 606
Query: 671 LVKIAVVKANGV 682
LV +A + G+
Sbjct: 607 LVHLARAQECGI 618
Score = 61 (26.5 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 25/139 (17%), Positives = 60/139 (43%)
Query: 458 SQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGA 517
S + + I L++ + P E A L+ L + N A++G PL+ ++ +
Sbjct: 363 SSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAI-PLLLSLLSSS 421
Query: 518 E-SSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXGCS 576
+ ++ + ALL++ + + N + G +P ++ ++ +G+ +
Sbjct: 422 DLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVID 481
Query: 577 KNRELISAAGGIPQVLELM 595
+ + I G IP ++ L+
Sbjct: 482 EYKVTIGGMGAIPALVVLL 500
Score = 61 (26.5 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 37/155 (23%), Positives = 63/155 (40%)
Query: 764 ELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSI 823
E ++A+++ L S E + +A + L R N + + E G PLL++LL +
Sbjct: 365 ERANIDALLSKLCSPDTEEQRSAAAEL-RLLAKRNANNRICIAEAGAIPLLLSLLSSSDL 423
Query: 824 TAKARAAALIGTLSTSSPKFTDMPESAGCWCFRPSRAHLCQVHGGICSESTSFCLLKANA 883
+ A + LS + S PS H+ + +G + + + A
Sbjct: 424 RTQEHAVTALLNLSIHEDNKASIISSGAV----PSIVHVLK-NGSMEARENA-----AAT 473
Query: 884 LPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRG 918
L L + + +V AI L L+ EG QRG
Sbjct: 474 LFSLSVIDEYKVTIGGMGAIPALVVLLGEG-SQRG 507
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 119 (46.9 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 64/261 (24%), Positives = 112/261 (42%)
Query: 577 KNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSS---DGIKFLVDEKGNRLE- 632
+NR I+ AG IP + L+ S N I + + + L+ + K + E+G+ LE
Sbjct: 439 ENRAYIAEAGAIPHLCRLLTSE----NAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLES 494
Query: 633 LEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVXXXXXXXXXX 692
+ ++ + LT++ N A LF + +IA+V V
Sbjct: 495 IVSVLVSGLTVEAQEN--------AAATLFSLSAVHEYKKRIAIVD-QCVEALALLLQNG 545
Query: 693 XXEVREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLP 752
++ A+ L+ S H P+ +++ + +LVG L+N+ V AAG LA L
Sbjct: 546 TPRGKKDAVTALYNLSTH-PDNCSR-MIEGGGVSSLVGALKNEG---VAEEAAGALALLV 600
Query: 753 KSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVER-GVY 811
+ L E + ++ +++ GT KENA++AL V+ +
Sbjct: 601 RQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCRSGGAAVAEKVLRAPAIA 660
Query: 812 PLLVNLLQIGSITAKARAAAL 832
LL LL G+ A+ +AA+L
Sbjct: 661 GLLQTLLFTGTKRARRKAASL 681
Score = 112 (44.5 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 253 ENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLR 312
+ +I F C I+ +M DPV + TG T +R +I W++ T P+TG +L D+ +
Sbjct: 300 DTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIV 359
Query: 313 SNSPLRQSIEEW 324
N L+ I +W
Sbjct: 360 PNRALKNLIVQW 371
Score = 96 (38.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 748 LANLPKSELSLTMKLIELDGLNAIINILKSG-TMEAKENALSALFRFTDPTNLEAQRNVV 806
+ NL E + + + E D L +I+++L SG T+EA+ENA + LF + + + +V
Sbjct: 472 MLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIV 531
Query: 807 ERGVYPLLVNLLQIGSITAKARAAALIGTLSTSSPKFTDMPESAG 851
++ V L + LLQ G+ K A + LST + M E G
Sbjct: 532 DQCVEALAL-LLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGG 575
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 101 (40.6 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 264 CRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSIEE 323
C I+ +M DPV + TG T +R++I W T P TG +L T L N +RQ I +
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRK 353
Query: 324 WKELN 328
+ N
Sbjct: 354 HCKTN 358
Score = 90 (36.7 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 33/135 (24%), Positives = 61/135 (45%)
Query: 507 KPLIDRIIQGAES-SRILMMKALLSMELVDSNLELLGKE-GIIPPLLGLVGSGNFQXXXX 564
K L++ + +GA++ +R+ AL + V+ L+G+ IP L+ +V G+
Sbjct: 473 KILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIV-KGDDYGDSA 531
Query: 565 XXXXXXXXXGC---SKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSS--DG 619
G S N + AAG +P +L+L+ S + + C L KL+ DG
Sbjct: 532 KRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATLAKLAEYPDG 591
Query: 620 IKFLVDEKGNRLELE 634
++ G +L ++
Sbjct: 592 TIGVIRRGGLKLAVK 606
Score = 84 (34.6 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 31/165 (18%), Positives = 86/165 (52%)
Query: 4 ELIPIGTILAVLTNQV--IKTAQAAKNVVYEKESFKVLSKHLFDIESVLKELQLQKLNDS 61
E I I T+L L I T ++ K+ K+SF+ + + ++ V +E++++ N
Sbjct: 22 ESISIVTLLDSLIQLAGDILTFKS-KHFSTNKQSFRETLRRIQNLLVVFEEIRIRIRNSR 80
Query: 62 Q-----AVRLALESLEADVEKANNLVEKY-KNKSRFYLLVKCRYIVNEIQEVTRNIGRSL 115
+ A +L+ + +K L+E ++ +R +++ + + ++ +TR+I SL
Sbjct: 81 RYFHDSAAASSLKEIHVGFQKLKFLLEDCTRDGARLCMMMNSDQVSDHLRVLTRSISTSL 140
Query: 116 ASLSLANTEVLSEISDQMNRLQNEMQR--VEFKASQSQIVDKLNQ 158
++ +A+ ++ +E+++ ++ + + ++ V+ + + + V +N+
Sbjct: 141 SAFPVASVDLTTEVNELIDLVVRQARKYGVQPETNDKRAVSSINR 185
Score = 76 (31.8 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 48/206 (23%), Positives = 87/206 (42%)
Query: 636 IVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVXXXXXXXXXXXXE 695
++ LT + N + A+R + R+ + + +VKA V
Sbjct: 388 LIAKFLT-SELINGGEEMIYRAVREI-RVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIR 445
Query: 696 VREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSE 755
++E A+ + S H G + + + L+ LV L AK + ++ +A L L S
Sbjct: 446 IQENAMAGILNLSKHVT-GKSK--IAGEGLKILVEILNEGAKTETRLYSASALFYL--SS 500
Query: 756 LSLTMKLI--ELDGLNAIINILKSGTM--EAKENALSALFRFTDPTNLEAQRNVVERGVY 811
+ +LI D + ++NI+K AK +AL A+ + + V+ G
Sbjct: 501 VEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQS--DNHWRVLAAGAV 558
Query: 812 PLLVNLLQIGSITAKARAAALIGTLS 837
P+L++LL+ G I+ A L TL+
Sbjct: 559 PILLDLLRSGEISGGLTADCL-ATLA 583
Score = 73 (30.8 bits), Expect = 5.5e-08, Sum P(4) = 5.5e-08
Identities = 56/271 (20%), Positives = 119/271 (43%)
Query: 762 LIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIG 821
L++ + ++ +L S + +ENA++ + + ++ + + G+ +LV +L G
Sbjct: 426 LVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSK--HVTGKSKIAGEGL-KILVEILNEG 482
Query: 822 SITAKA--RAAAL--IGTLSTSSPKFTDMPESA-GCWCF--------RPSRAHLCQVHGG 868
+ T A+AL + ++ S + P++ G R+ L V G
Sbjct: 483 AKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGL 542
Query: 869 ICSESTSFCLLKANALPHLVKLLQ-GRVHA--TAYEAIQTLSTLVQEGCQQRGVNVLHQE 925
+ + +L A A+P L+ LL+ G + TA + + TL+ L + + V+ +
Sbjct: 543 LMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTA-DCLATLAKLAEY--PDGTIGVIRRG 599
Query: 926 EAIKPTLEILTWGTDS---LKEEALGFLEKVFMSKEMVDTYGSSARLLLVPLTSRNVHED 982
+K ++IL+ DS +K+ +G + + ++ D G + LV + V +
Sbjct: 600 -GLKLAVKILSSSEDSPVAVKQHCVGLILNLCLNGGR-DVVGVLVKNSLVMGSLYTVLSN 657
Query: 983 GSL--ERKAAKVLSLIERYSRSST-SLIPGL 1010
G +KA+ ++ +I + T S+ P L
Sbjct: 658 GEYGGSKKASALIRMIHEFQERKTGSVEPNL 688
Score = 51 (23.0 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
Identities = 24/74 (32%), Positives = 35/74 (47%)
Query: 871 SESTSF---CLLKANALPHLVKLLQG---RVHATAYEAIQTLSTLVQEGCQQRGVNVLHQ 924
++++SF CL+KA A+ L+KLL R+ A I LS V + G
Sbjct: 416 TKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKSKIAG------ 469
Query: 925 EEAIKPTLEILTWG 938
E +K +EIL G
Sbjct: 470 -EGLKILVEILNEG 482
Score = 43 (20.2 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 576 SKNRELISAAGGIPQVLELMFSS--HVPSNI---IVKCSEIL---EKLSSDGIKFLVD 625
S NR + AG + +L+L+ S + N I+ S+ + K++ +G+K LV+
Sbjct: 420 SFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKSKIAGEGLKILVE 477
Score = 42 (19.8 bits), Expect = 5.5e-08, Sum P(4) = 5.5e-08
Identities = 15/51 (29%), Positives = 21/51 (41%)
Query: 507 KPLIDRIIQGAESSRILMMKALLSMELVDS-NLELLGKEGIIPPLLGLVGS 556
K L +I G E ++ + S N L K G + PLL L+ S
Sbjct: 391 KFLTSELINGGEEMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSS 441
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 142 (55.0 bits), Expect = 1.5e-09, Sum P(4) = 1.5e-09
Identities = 55/238 (23%), Positives = 102/238 (42%)
Query: 127 SEISDQMNRLQNEMQRVEFKASQSQIVDKLNQGLRDQKLD-QGFANDMLEEIARAVGVPV 185
S ++ + ++ +Q E + +++ + LR+QK D N+ LE I + +G+ +
Sbjct: 121 SPVTSSVQSVERCVQETESFKQEGTLMELMENALRNQKDDITSLDNNHLESIIQMLGL-I 179
Query: 186 EPSEISKELASFXXXXXXXXXXXXXXXVLFLDQVIELLSRADAARDYEEVKKQYFQRLQI 245
++ KE + + +Q+IEL+ R++ +K ++ + +
Sbjct: 180 SNQDLLKESITVEKERIRSQASKSEEDMEQTEQLIELVL---CIREHM-LKTEFLEVAKG 235
Query: 246 IERYDSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVV 305
I I P F+C ++ +M+DPV + +G T +R +I+ WLD P T V
Sbjct: 236 IS--------IPPY--FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQV 285
Query: 306 LEDTSLRSNSPLRQSIEEWKELNYCLNIRCCRAKLLSGIDSSELEALDQMQDLMRESS 363
L L N ++ I W E N +N+ G D+S + QD R S
Sbjct: 286 LTHQELIPNYTVKAMIASWLEANR-INLATNSCHQYDGGDASSMANNMGSQDFNRTES 342
Score = 92 (37.4 bits), Expect = 1.5e-09, Sum P(4) = 1.5e-09
Identities = 40/180 (22%), Positives = 77/180 (42%)
Query: 460 QCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAES 519
+C I L++L+ + + E A L L + E N + G +PL+ + G +
Sbjct: 512 RCGAITPLLSLLYSEEKLTQEHAVTALLNL-SISELNKAMIVEVGAIEPLVHVLNTGNDR 570
Query: 520 SRILMMKALLSMELVDSNLELLGKEGI-IPPLLGLVGSGNFQXXXXXXXXXXXXXGCSKN 578
++ +L S+ ++ N E +G+ I L+ L+G G F+ N
Sbjct: 571 AKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDN 630
Query: 579 RELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSS--DGIKFLVDEKGNRLELEPI 636
+ I A + ++EL+ ++ K +L LS+ +G + +V E G L +E +
Sbjct: 631 KARIVQAKAVKYLVELLDPD---LEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETV 687
Score = 91 (37.1 bits), Expect = 1.9e-09, Sum P(4) = 1.9e-09
Identities = 61/282 (21%), Positives = 108/282 (38%)
Query: 638 TNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVXXXXXXXXXXXXEVR 697
++ + L ++ S N K A A R + ++ + + + +
Sbjct: 472 SHTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQ 531
Query: 698 EIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELS 757
E A+ L S E + +++ +E LV L + +AA L + S L
Sbjct: 532 EHAVTALLNLSISELNKAM--IVEVGAIEPLVHVLNTGNDRAKENSAASLFS---LSVLQ 586
Query: 758 LTMKLIELDG--LNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLV 815
+ + I + A++N+L GT K++A SALF + + +A+ +V+ LV
Sbjct: 587 VNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKAR--IVQAKAVKYLV 644
Query: 816 NLLQIGSITAKARAAALIGTLSTSSPKFTDMPESAGCWCF--------RPSRAHLCQVHG 867
LL + +A AL+ LS + G + + + V
Sbjct: 645 ELLD-PDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLL 703
Query: 868 GICSESTSFC--LLKANALPHLVKLLQGRVHATAYEAIQTLS 907
+C S FC +L+ A+P LV L Q +A Q LS
Sbjct: 704 QLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLS 745
Score = 87 (35.7 bits), Expect = 4.7e-09, Sum P(4) = 4.7e-09
Identities = 47/208 (22%), Positives = 92/208 (44%)
Query: 637 VTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVXXXXXXXXXXXXEV 696
+T LL+L ++ ++ A+ AL + S +EL K +V+ +
Sbjct: 516 ITPLLSLL--YSEEKLTQEHAVTALLNL--SISELNKAMIVEVGAIEPLVHVLNTGNDRA 571
Query: 697 REIAINLLFLFSHHEPEGVVEYLLKPKR-LEALVGFLENDAKHDVQMAAAGLLANLPKSE 755
+E + LF S + E + + ++ALV L + AA+ L NL +
Sbjct: 572 KENSAASLFSLSVLQVNR--ERIGQSNAAIQALVNLLGKGTFRGKKDAASALF-NLSITH 628
Query: 756 LSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLV 815
+ ++++ + ++ +L +E + A++ L + E ++ +V G PLLV
Sbjct: 629 DNKA-RIVQAKAVKYLVELLDPD-LEMVDKAVALLANLSAVG--EGRQAIVREGGIPLLV 684
Query: 816 NLLQIGSITAKARAAALIGTLSTSSPKF 843
+ +GS K AA+++ L +SPKF
Sbjct: 685 ETVDLGSQRGKENAASVLLQLCLNSPKF 712
Score = 79 (32.9 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 48/221 (21%), Positives = 93/221 (42%)
Query: 740 VQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNL 799
V+ AAA + +L + + + + + ++++L S +E+A++AL +
Sbjct: 488 VKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELN 547
Query: 800 EAQRNVVERGVYPLLVNLLQIGSITAKARAAALIGTLST----------SSPKFTDMPES 849
+A +VE G LV++L G+ AK +AA + +LS S+ +
Sbjct: 548 KAM--IVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNL 605
Query: 850 AGCWCFRPSRAHLCQVHGGICSESTSFCLLKANALPHLVKLLQGRVHATAYEAIQTLSTL 909
G FR + + + +++A A+ +LV+LL + +A+ L+ L
Sbjct: 606 LGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVD-KAVALLANL 664
Query: 910 VQEGCQQRGVNVLHQEEAIKPTLEILTWGTDSLKEEALGFL 950
G G + +E I +E + G+ KE A L
Sbjct: 665 SAVG---EGRQAIVREGGIPLLVETVDLGSQRGKENAASVL 702
Score = 71 (30.1 bits), Expect = 1.7e-07, Sum P(4) = 1.7e-07
Identities = 21/98 (21%), Positives = 41/98 (41%)
Query: 495 ENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLV 554
EN + G PL+ + + ++ + ALL++ + + N ++ + G I PL+ ++
Sbjct: 505 ENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVL 564
Query: 555 GSGNFQXXXXXXXXXXXXXGCSKNRELISAAGGIPQVL 592
+GN + NRE I + Q L
Sbjct: 565 NTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQAL 602
Score = 57 (25.1 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 55/265 (20%), Positives = 103/265 (38%)
Query: 529 LSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXGCSKNRELISAAGGI 588
L++ +++ + + G+ G I PLL L+ S N+ +I G I
Sbjct: 499 LTINSIENRVHI-GRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVGAI 557
Query: 589 PQVLELMFSSHVPSNIIVKCSEILEKLSSDGIKFLVDEKGNRLELEPIVTNLLTLQQNFN 648
++ ++ + N K + S ++ + G + NLL
Sbjct: 558 EPLVHVLNTG----NDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLG-----K 608
Query: 649 SSYNVRKPALRALFRICKSEAELVKIAVVKANGVXXXXXXXXXXXXEVREIAINLLFLFS 708
++ +K A ALF + + K +V+A V E+ + A+ LL S
Sbjct: 609 GTFRGKKDAASALFNLSITHDN--KARIVQAKAVKYLVELLDPDL-EMVDKAVALLANLS 665
Query: 709 HHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGL 768
EG + +++ + LV ++ ++ + AA+ LL S T+ L E +
Sbjct: 666 A-VGEGR-QAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQE-GAI 722
Query: 769 NAIINILKSGTMEAKENALSALFRF 793
++ + +SGT AKE A L F
Sbjct: 723 PPLVALSQSGTQRAKEKAQQLLSHF 747
Score = 41 (19.5 bits), Expect = 1.5e-09, Sum P(4) = 1.5e-09
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 924 QEEAIKPTLEILTWGTDSLKEEA 946
QE AI P + + GT KE+A
Sbjct: 718 QEGAIPPLVALSQSGTQRAKEKA 740
Score = 40 (19.1 bits), Expect = 1.5e-09, Sum P(4) = 1.5e-09
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 6 IPIGTILAVLTNQ--VIKTAQAAKNVVYEKESFK 37
+ I IL L+ V + Q+ + V E ESFK
Sbjct: 108 LEISRILLQLSQSSPVTSSVQSVERCVQETESFK 141
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 116 (45.9 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 61/243 (25%), Positives = 106/243 (43%)
Query: 725 LEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDG-LNAIINILKSGTMEAK 783
+ LV L +D + Q A + NL E + +LI L G + +I+ +L++G+MEA+
Sbjct: 385 IPVLVKLLTSDGDTETQENAVTCILNLSIYEHN--KELIMLAGAVTSIVLVLRAGSMEAR 442
Query: 784 ENALSALFRFTDPTNLEAQRNVV--ERGVYPLLVNLLQIGSITAKARAAALIGTL----- 836
ENA + LF + L + ++ G LV+LLQ GS+ K AA + L
Sbjct: 443 ENAAATLFSLS----LADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQG 498
Query: 837 --------STSSPKFTDMPESAGCWCFRPSRAHLCQVHGGICSESTSFCLLKANALPHLV 888
P + +S+ R + L + ++ +L+ANA+P L+
Sbjct: 499 NKGRAVRAGIVKPLVKMLTDSSS---ERMADEALTILSVLASNQVAKTAILRANAIPPLI 555
Query: 889 KLLQGRVHATAYEAIQTLSTLVQEGCQQRGVNVLHQEEAIKPTLEILTWGTDSLKEEALG 948
LQ A L L + ++ +++ + A+ P +E+ GT+ K +A
Sbjct: 556 DCLQKDQPRNRENAAAILLCLCKRDTEKL-ISI-GRLGAVVPLMELSRDGTERAKRKANS 613
Query: 949 FLE 951
LE
Sbjct: 614 LLE 616
Score = 107 (42.7 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F C I+ +M DP + TG T ER+ I+ W+D + P+T LE+ +L N LR I
Sbjct: 247 FLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRSLI 306
Query: 322 EEW 324
+W
Sbjct: 307 SQW 309
Score = 86 (35.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 64/309 (20%), Positives = 121/309 (39%)
Query: 455 RKLSQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRII 514
R LS S I LV + E A ++ L +N A++G L+ +
Sbjct: 334 RDLSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLT 393
Query: 515 Q-GAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXX 573
G ++ + +L++ + + N EL+ G + ++ ++ +G+ +
Sbjct: 394 SDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLS 453
Query: 574 GCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSSDGIKFLVDEKGN--RL 631
+N+ +I A+G I +++L+ V +K ++ + L +GN R
Sbjct: 454 LADENKIIIGASGAIMALVDLLQYGSVRG----------KKDAATALFNLCIYQGNKGRA 503
Query: 632 ELEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVXXXXXXXXX 691
IV L+ + + +SS + AL L + ++ + K A+++AN +
Sbjct: 504 VRAGIVKPLVKMLTD-SSSERMADEALTILSVLASNQ--VAKTAILRANAIPPLIDCLQK 560
Query: 692 XXXEVREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLE--NDAKHDVQMAAAGLLA 749
RE A +L + E L+ RL A+V +E D + A LL
Sbjct: 561 DQPRNRENAAAILLCLCKRD----TEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLE 616
Query: 750 NLPKSELSL 758
L KS L
Sbjct: 617 LLRKSSRKL 625
Score = 80 (33.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 62/282 (21%), Positives = 108/282 (38%)
Query: 737 KHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDP 796
KH+++ + S+ S ++ + A++ L S ++E + A+S + R
Sbjct: 312 KHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAVSEI-RSLSK 370
Query: 797 TNLEAQRNVVERGVYPLLVNLLQI-GSITAKARAAALIGTLST-SSPKFTDMPESAGCWC 854
+ + + + E G P+LV LL G + A I LS K M A
Sbjct: 371 RSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSI 430
Query: 855 FRPSRAHLCQVHGGICSESTSFCLLKAN--------ALPHLVKLLQ-GRVHATAYEAIQT 905
RA + + S L N A+ LV LLQ G V A
Sbjct: 431 VLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATAL 490
Query: 906 LSTLVQEGCQQRGVNVLHQEEAIKPTLEILT-WGTDSLKEEALGFLEKVFMSKEMVDTYG 964
+ + +G + R V +KP +++LT ++ + +EAL L V S ++ T
Sbjct: 491 FNLCIYQGNKGRAVRA----GIVKPLVKMLTDSSSERMADEALTILS-VLASNQVAKTAI 545
Query: 965 SSARLLLVPLTSRNVHEDGSLERKAAKVLSLIERYSRSSTSL 1006
A + + + + E AA +L L +R + S+
Sbjct: 546 LRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISI 587
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 120 (47.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F+C ++ +M DPV L +G T ++ I+ WL +T P+T VL T+L N +R+ I
Sbjct: 78 FRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIREMI 137
Query: 322 EEWKELN 328
+W + N
Sbjct: 138 SKWCKKN 144
Score = 92 (37.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 509 LIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGN 558
LID + +G ++R A+ ++ +DSN L+GK GI+ PL+ L+ GN
Sbjct: 263 LIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGN 312
Score = 68 (29.0 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 766 DGLNAIINILKSGTM---EAKENALSALFRFT--DPTNLEAQRNVVER-GVYPLLVNLLQ 819
D + ++N L G+ + +E+ ++ L + D +N ++ V E V PLL++ L+
Sbjct: 212 DEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDSN---KKLVCENPNVIPLLIDALR 268
Query: 820 IGSITAKARAAALIGTLS 837
G++ ++ AAA I TLS
Sbjct: 269 RGTVATRSNAAAAIFTLS 286
Score = 52 (23.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 18/92 (19%), Positives = 41/92 (44%)
Query: 509 LIDRIIQGAESSRIL---MMKALLSMELVD-SNLELLGKE-GIIPPLLGLVGSGNFQXXX 563
L++ ++ G+ L ++ LL++ + D SN +L+ + +IP L+ + G
Sbjct: 217 LVNPLLHGSNPDEKLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRS 276
Query: 564 XXXXXXXXXXGCSKNRELISAAGGIPQVLELM 595
N+ LI +G + +++L+
Sbjct: 277 NAAAAIFTLSALDSNKVLIGKSGILKPLIDLL 308
Score = 51 (23.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 465 LFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSRILM 524
L + L +G V + A I L +D N KSG KPLID + +G + +
Sbjct: 262 LLIDALRRGTVATRSNAAAAIFT-LSALDS-NKVLIGKSGILKPLIDLLEEGNPLAIKDV 319
Query: 525 MKALLSMELVDSNLELLGKEGIIPPLLGLVGSG 557
A+ ++ + N ++G + L + +G
Sbjct: 320 AAAIFTLCIAHENRSRAVRDGAVRVLGKKISNG 352
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 115 (45.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 48/189 (25%), Positives = 86/189 (45%)
Query: 450 NVAVCRKLSQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPL 509
N A R L + I L+ L++ + E A L L + ++N A G K L
Sbjct: 213 NRADNRVLIGESGAIQALIPLLRCNDPWTQEHAVTALLNL-SLHDQNKAVIAAGGAIKSL 271
Query: 510 IDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXX 569
+ + G E+S+ ALLS+ L++ N +G G IPPL+ L+ +G+ +
Sbjct: 272 VWVLKTGTETSKQNAACALLSLALLEENKGSIGACGAIPPLVSLLLNGSCRGKKDALTTL 331
Query: 570 XXXXGCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSS--DGIKFLVDEK 627
+N+E AG + +++L+ + + + K +L L++ DG + +V+E
Sbjct: 332 YKLCTLQQNKERAVTAGAVKPLVDLV--AEEGTGMAEKAMVVLSSLAAIDDGKEAIVEEG 389
Query: 628 GNRLELEPI 636
G +E I
Sbjct: 390 GIAALVEAI 398
Score = 89 (36.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 762 LIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIG 821
++E G+ A++ ++ G+++ KE A+ L + + + + +V G P LV L Q G
Sbjct: 385 IVEEGGIAALVEAIEDGSVKGKEFAILTLLQLCSDS-VRNRGLLVREGAIPPLVGLSQSG 443
Query: 822 SIT--AKARAAALIGTL 836
S++ AK +A L+G L
Sbjct: 444 SVSVRAKRKAERLLGYL 460
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 99 (39.9 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 24/71 (33%), Positives = 32/71 (45%)
Query: 258 PLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPL 317
P +C I+ +M DPV + +G T ER IE W T P+T L L N +
Sbjct: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCV 338
Query: 318 RQSIEEWKELN 328
+ I W E N
Sbjct: 339 KALISSWCEQN 349
Score = 82 (33.9 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 58/261 (22%), Positives = 108/261 (41%)
Query: 540 LLGKEGIIPPLLGLVGSG-NFQXXXXXXXXXXXXXGCS----KNRELISAAGGIPQVLEL 594
L+G+ G + LL +GS N + +N+EL+ A+G IP + E+
Sbjct: 459 LMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEM 518
Query: 595 MFSSHVPSNIIVKCSEILEKLSS-DGIKFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNV 653
+ + H ++ + I LS + K ++ G+ L + P + NLL + +
Sbjct: 519 LCNPHSHGSV----TAIYLNLSCLEEAKPVI---GSSLAV-PFMVNLLWTE----TEVQC 566
Query: 654 RKPALRALFRICKSEAELVKIAVVKANGVXXXXXXXXXXXXEVREIAINLLFLFSHHEPE 713
+ AL +LF + + ++ A+ V E ++ +L +E
Sbjct: 567 KVDALHSLFHLSTYPPNIP--CLLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLNEA- 623
Query: 714 GVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIIN 773
G E + P + L L+ ++ + A + LL SE+ M L E + ++++
Sbjct: 624 GKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEICSEMVLQE-GVIPSLVS 682
Query: 774 ILKSGTMEAKENA--LSALFR 792
I +GT +E A L LFR
Sbjct: 683 ISVNGTQRGRERAQKLLTLFR 703
Score = 72 (30.4 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 30/144 (20%), Positives = 58/144 (40%)
Query: 46 IESVLKELQLQKLNDSQAVRLALESLEADVEKANNLVEKYKNKSRFYLLVKCRYIVNEIQ 105
I S+ L+ + ++ AL SL +EK N++ S+ YL + +V + +
Sbjct: 33 IMSIFPSLEAARPRSKSGIQ-ALCSLHVVLEKVKNILRHCTESSKLYLAITGDSVVLKFE 91
Query: 106 EVTRNIGRSLASLSLANTEVLSEISDQMNRLQNEMQRVEF------KASQSQIVDKLNQG 159
+ ++ SL + V I Q+ + E++ EF K QI+ L QG
Sbjct: 92 KAKSSLTDSLRRVE---DIVQQSIGSQLLEILMELENTEFSLDPAEKEIGDQIIGLLQQG 148
Query: 160 LRDQKLDQGFANDMLEEIARAVGV 183
+ ++ + A +G+
Sbjct: 149 GNFESSSDNNELEVFHQAATRLGI 172
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 107 (42.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 260 NAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTS-LRSNSPLR 318
N F+C I+ +M DPV L +G T +R +I+ W+D +T P T + L +T L N LR
Sbjct: 7 NDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHALR 66
Query: 319 QSI 321
I
Sbjct: 67 SLI 69
Score = 86 (35.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 53/244 (21%), Positives = 112/244 (45%)
Query: 595 MFSSHVPSNIIVKCSEILEKLSSDGIKFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNVR 654
+ +H ++I+ + + K SS + ++ + + + +++ L++ Q + N+S +
Sbjct: 59 LIPNHALRSLILNFAHVSLKESS---RPRTQQEHSHSQSQALISTLVS-QSSSNAS---K 111
Query: 655 KPALRALFRICKSEAELVKIAVVKANGVXXXXXXXXXXXXEVREIAINLLFLFSHHEPEG 714
+L L R+ K ++ ++ V ++ V ++E +++LL S +
Sbjct: 112 LESLTRLVRLTKRDSS-IRRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNK 170
Query: 715 VVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINI 774
V L+ + +V L + D + AA LL +L E++ D ++A++++
Sbjct: 171 VG--LVADGVIRRIVTVLRVGSP-DCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSL 227
Query: 775 LKSGT-MEAKENALSALFRFTD-PTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAAAL 832
L+ G E KE+A +AL+ P N ++ VV+ G P+LV G RA +
Sbjct: 228 LRVGNDRERKESA-TALYALCSFPDN---RKRVVDCGSVPILVEAADSGL----ERAVEV 279
Query: 833 IGTL 836
+G L
Sbjct: 280 LGLL 283
Score = 85 (35.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 31/115 (26%), Positives = 56/115 (48%)
Query: 726 EALVGFLENDAKHDV-QMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKE 784
+AL+ L + + + ++ + L L K + S+ K+ E + A ++ + S +E
Sbjct: 95 QALISTLVSQSSSNASKLESLTRLVRLTKRDSSIRRKVTESGAVRAALDCVDSCNQVLQE 154
Query: 785 NALSALFRFTDPTNLEAQRNV--VERGVYPLLVNLLQIGSITAKARAAALIGTLS 837
+LS L + LE V V GV +V +L++GS KA AA L+ +L+
Sbjct: 155 KSLSLLLNLS----LEDDNKVGLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLA 205
Score = 68 (29.0 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 40/193 (20%), Positives = 81/193 (41%)
Query: 456 KLSQQCSGILFLVTLIKGPVRESAECAE---KILQQL-------FDVDEENFCRAAKSGW 505
+L+++ S I VT G VR + +C + ++LQ+ ++++N G
Sbjct: 120 RLTKRDSSIRRKVTE-SGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKVGLVADGV 178
Query: 506 YKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGK-EGIIPPLLGLVGSGNFQXXXX 564
+ ++ + G+ + + L S+ +V+ N +G I L+ L+ GN +
Sbjct: 179 IRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRERKE 238
Query: 565 XXXXXXXXXGCSKNRELISAAGGIPQVLELMFSSHVPS----NIIVKCSEILEKLS--SD 618
NR+ + G +P ++E S + ++VKC E++S S
Sbjct: 239 SATALYALCSFPDNRKRVVDCGSVPILVEAADSGLERAVEVLGLLVKCRGGREEMSKVSG 298
Query: 619 GIKFLVD--EKGN 629
++ LV+ GN
Sbjct: 299 FVEVLVNVLRNGN 311
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 126 (49.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
FKC ++ TVM DPV + +G T ER I+ W D + P + L+D +L+ N L+ I
Sbjct: 223 FKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELKSQI 282
Query: 322 EEW 324
EW
Sbjct: 283 SEW 285
Score = 77 (32.2 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 696 VREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSE 755
V E A+N+L + S+H P G + + L +L+ +E+ A+H +Q A L NL S
Sbjct: 478 VAEEALNILEVLSNH-PHGPSK-ITSSGSLSSLLKIVESQAEH-LQEQAMITLKNL-SSS 533
Query: 756 LSLTMKLIELDGLNAIINILK 776
+ + ++++ LD + + + L+
Sbjct: 534 MEICLEMVSLDFIQKLTSFLQ 554
Score = 58 (25.5 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 30/116 (25%), Positives = 49/116 (42%)
Query: 725 LEALVGFLENDA--KHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEA 782
++ L FL+ KH + +L NL +E D L +I +L+S E
Sbjct: 546 IQKLTSFLQQKVFCKHSII-----ILKNLCSTEKGRGCITETPDCLASIAELLESNVPEE 600
Query: 783 KENALSALFRFTDPTNLEAQRNVVERG--VYPLLVNLLQIGSITAKARAAALIGTL 836
+ENA+S L + +E VV +Y L+ + G+ K A+ L+ L
Sbjct: 601 QENAISILLQLC-VQKIEYCCLVVREATDIYSSLILISNNGTEEVKVSASELLRAL 655
Score = 41 (19.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 4/20 (20%), Positives = 13/20 (65%)
Query: 490 FDVDEENFCRAAKSGWYKPL 509
+ +D ++ + +K G++ P+
Sbjct: 338 YSIDSSSYSKMSKGGYFTPM 357
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 105 (42.0 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 247 ERYDSREN---YIQPLNA--FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPE 301
E D E+ ++ LN +C I+ +M DPV L +G T +R++I W T P+
Sbjct: 262 EEKDKEEDDLMMVRSLNVDDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPK 321
Query: 302 TGVVLEDTSLRSNSPLRQSIEEWKELN 328
TG L T L N ++Q I+ + + N
Sbjct: 322 TGKTLVSTVLVDNFSVKQVIQSYSKQN 348
Score = 76 (31.8 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 23/123 (18%), Positives = 61/123 (49%)
Query: 27 KNVVYEKESFKVLSKHLFDIESVLKELQLQ----KLNDSQAVRLALESLEADVEKANNLV 82
K+ K S K +H+ + +EL++Q + ++V L+L L +K L+
Sbjct: 46 KHFSTNKRSVKETLRHVQTLVIFFEELRIQIRVGSIPAGRSVILSLSELHVIFQKLKFLL 105
Query: 83 EKY-KNKSRFYLLVKCRYIVNEIQEVTRNIGRSLASLSLANTEVLSEISDQMNRLQNEMQ 141
+ ++ ++ Y+L+ + +++TR+I SL + + + ++ E+++ + + + +
Sbjct: 106 DDCTRDGAKLYMLMNSGQVSAHFRDLTRSISTSLDTFPVRSVDLPGEVNELIYLVMRQTR 165
Query: 142 RVE 144
+ E
Sbjct: 166 KSE 168
Score = 62 (26.9 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 31/138 (22%), Positives = 57/138 (41%)
Query: 504 GWYKPLIDRIIQGAE-SSRILMMKALLSMELVDSNLELLGK-EGIIPPLLGLVGS---GN 558
G + +++ + GA SR AL + + L+G+ IP L+ +V S G+
Sbjct: 459 GGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGD 518
Query: 559 FQXXXXXXXXXXXXXGCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSS- 617
N I AAG +P +L+L+ S + + IL K++
Sbjct: 519 SAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAKMAEY 578
Query: 618 -DGIKFLVDEKGNRLELE 634
DG+ ++ G +L ++
Sbjct: 579 PDGMISVLRRGGLKLAVK 596
Score = 52 (23.4 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 19/80 (23%), Positives = 42/80 (52%)
Query: 762 LIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVV--ERGVYPLLVNLLQ 819
L+E + +++ IL+S +ENA++ + + ++ + +V + G L+V +L
Sbjct: 412 LVEAGVVESLMKILRSDDPRIQENAMAGIMNLSK--DIAGKTRIVGEDGGGLRLIVEVLN 469
Query: 820 IGSIT-AKARAAALIGTLST 838
G+ ++ AAA + LS+
Sbjct: 470 DGARRESRQYAAAALFYLSS 489
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 869 ICSESTSF---CLLKANALPHLVKLLQG---RVHATAYEAIQTLS 907
I +++++F CL++A + L+K+L+ R+ A I LS
Sbjct: 400 ILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLS 444
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 141 (54.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 65/272 (23%), Positives = 119/272 (43%)
Query: 695 EVREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKS 754
E ++ A+ + L S ++PE ++ + K ++ L+ + + D+Q+ G+ A L S
Sbjct: 79 EQKQAAMEIRLL-SKNKPENRIK-IAKAGAIKPLISLISSS---DLQLQEYGVTAILNLS 133
Query: 755 ELSLTMKLIELDG-LNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVER-GVYP 812
+ I G + ++ LK GT AKENA AL R + +E + + R G P
Sbjct: 134 LCDENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQ---IEENKVAIGRSGAIP 190
Query: 813 LLVNLLQIGSITAKARAAALIGTLSTSSPKFTDMPESAGCWCFRPSRAHLCQVHGGICSE 872
LLVNLL+ G AK A+ + +L ++ +S +P L G +
Sbjct: 191 LLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSG---IMKPL-VELMADFGSNMVD 246
Query: 873 STSF-------------CLLKANALPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRGV 919
++F +++ +P LV++++ A+ L L +E R
Sbjct: 247 KSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVGTQRQKEMAVSILLQLCEESVVYR-- 304
Query: 920 NVLHQEEAIKPTLEILTWGTDSLKEEALGFLE 951
++ +E AI P + + GT K++A +E
Sbjct: 305 TMVAREGAIPPLVALSQAGTSRAKQKAEALIE 336
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 116 (45.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 29/104 (27%), Positives = 52/104 (50%)
Query: 225 RADAARDYEEVKKQYFQRLQIIE----RYDSRENYIQPLNAFKCRITGTVMMDPVSLYTG 280
R + + +E + RL+I+E + +S + ++ FKC ++ T+M+DPV +++G
Sbjct: 38 RVETVKSIDEAIR-ILNRLKIVESKKRKRESDSSSVEVPKEFKCTLSKTIMIDPVIIFSG 96
Query: 281 TTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSIEEW 324
T E+ I WL+ + T P VL L N + + I W
Sbjct: 97 QTYEKRYITEWLNH-DLTCPTAKQVLYRVCLTPNHLINELITRW 139
Score = 73 (30.8 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 34/134 (25%), Positives = 64/134 (47%)
Query: 429 PSISLA-AVKLLYEL-MQDRSGWNVA--VCRKLSQQCSGILFLVTLIKGPVRESAECAEK 484
PS S+A + EL +Q NV ++L + +L ++++ V + E E
Sbjct: 176 PSSSVADQTEAAKELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPELQEN 235
Query: 485 ILQQLFDVD--EENFCRAAKSGWYKPLIDRII-QGAESSRILMMKALLSMELVDSNLELL 541
I+ LF++ E+N A++ PL+ + + QG+ +R L S+ +DSN ++
Sbjct: 236 IVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIII 295
Query: 542 GKEGIIPPLLGLVG 555
G + L+ L+G
Sbjct: 296 GNSVALKALIDLIG 309
Score = 61 (26.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 781 EAKENALSALFRFTDPTNLEAQRNVVERG--VYPLLVNLLQIGSITAKARAAALIGTLS 837
E +EN ++ALF + E + V+ V PLL ++ GS+ + A + +LS
Sbjct: 231 ELQENIVTALFNMS---TFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLS 286
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 124 (48.7 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTD-PETGVVLEDTSLRSNSPLRQS 320
F+C I+ +M DPV++ TG T +RA+IE+W+ T P T L D +L N LR+
Sbjct: 18 FRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTLRRL 77
Query: 321 IEEW 324
I+EW
Sbjct: 78 IQEW 81
Score = 66 (28.3 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 23/83 (27%), Positives = 40/83 (48%)
Query: 583 SAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSSDGIKFLVDEKGNRLELEPIVTNLLT 642
S G + + L+F S + + V + ++E +S+ G K D KG+ E + +L
Sbjct: 192 SDPGRVEFLTRLLFDSSIETR--VNAAALIEIVST-GTKS-ADLKGSISNSESVFEGVLD 247
Query: 643 LQQNFNSSYNVRKPALRALFRIC 665
L +N SS K ++ LF +C
Sbjct: 248 LLRNPISSRRALKIGIKTLFALC 270
Score = 56 (24.8 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 28/113 (24%), Positives = 43/113 (38%)
Query: 650 SYNVRKPALRALFRICK-SEAELVKIAVVKANGVXXXXXXXXXXXXEVREIAINLLFLFS 708
S R ALR L + S+ V IA A + E+ ++ LL +
Sbjct: 121 SVRSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLP 180
Query: 709 HHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMK 761
EP V P R+E L L D+ + ++ AA L+ + S +K
Sbjct: 181 ITEPNQFVSISSDPGRVEFLTRLLF-DSSIETRVNAAALIEIVSTGTKSADLK 232
Score = 55 (24.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 26/83 (31%), Positives = 39/83 (46%)
Query: 771 IINILKSGTMEAK---EN-ALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITAK 826
+I IL S T ++ E+ AL + T+P + + + G L LL SI +
Sbjct: 155 LIKILFSETTSSELVSESLALLVMLPITEPNQFVSISS--DPGRVEFLTRLLFDSSIETR 212
Query: 827 ARAAALIGTLSTSSPKFTDMPES 849
AAALI +ST + K D+ S
Sbjct: 213 VNAAALIEIVSTGT-KSADLKGS 234
Score = 38 (18.4 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 812 PLLVN-LLQIGSITAKARAAALIGTLSTSSPKFTDMPESAG 851
PLLV +L++ + A AL+ L T+ ++ + AG
Sbjct: 329 PLLVKTILRVSDRATEYAAGALLA-LCTAEERWREEAAGAG 368
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 125 (49.1 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
FKC I+ VM PVSL TG T +R +I+ WLD T P T +L++ N L + I
Sbjct: 15 FKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLHRLI 74
Query: 322 EEWKE 326
+ W +
Sbjct: 75 DHWSD 79
Score = 61 (26.5 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 42/188 (22%), Positives = 78/188 (41%)
Query: 527 ALLSMELVDSNLELL-GK-EGIIPPLLGLVGSGNFQXXXXXXXXXXXXXGCSKNRELISA 584
A+L VD+ +L+ K EG++ ++ L+ S + SK +L
Sbjct: 211 AVLEFIAVDAESKLIIAKGEGLVTEIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALI 270
Query: 585 AGGIPQVLELMFSSHVPS-NIIVKCSEILEKLSS--DGIKFLVDEKGNRLELEPIVTNLL 641
+ L + + S ++ KC ++LE +SS +G + D G + +E +V L+
Sbjct: 271 REKLVTKLTSLLTDPTTSVSVTEKCLKLLEAISSCKEGRSEICD--G--VCVETVVNKLM 326
Query: 642 TLQQNFNSSYNVRKPALRALFRICKSEAEL-VKIAVVKANGVXXXXXXXXXX-XXEVREI 699
+ S + A+ L+ +C E + AV++ NGV VR +
Sbjct: 327 KV------STAATEHAVTVLWSVCYLFKEKKAQDAVIRINGVTKILLLLQSNCSLTVRHM 380
Query: 700 AINLLFLF 707
+LL +F
Sbjct: 381 LTDLLKVF 388
Score = 54 (24.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 606 VKCSEILEKLSSDGIKFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPALRALFRIC 665
+ CS +LE ++ D L+ KG E +VT ++ L + +S ++ + L L I
Sbjct: 207 IDCSAVLEFIAVDAESKLIIAKG-----EGLVTEIIKLISS-DSDSSLIEANLSLLIAIA 260
Query: 666 KSEAELVKIAVVK 678
S+ VK+A+++
Sbjct: 261 SSKR--VKLALIR 271
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 139 (54.0 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 67/317 (21%), Positives = 132/317 (41%)
Query: 454 CRKLSQQCSGILFLVTLIKGPVRESA-ECAEKILQQLFDVDEENFCRAAKSGWYKPLIDR 512
CR+ Q + LV++++ ES E A L L DE+N ++G +P+I+
Sbjct: 98 CRRHFSQA--VEPLVSMLRFDSPESHHEAALLALLNLAVKDEKNKVSIIEAGALEPIINF 155
Query: 513 IIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXX 572
+ + + + +LL++ +N ++G G++P L+ ++ G+ Q
Sbjct: 156 LQSNSPTLQEYASASLLTLSASANNKPIIGANGVVPLLVKVIKHGSPQAKADAVMALSNL 215
Query: 573 XGCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSSDGIKF---LVDEKGN 629
N +I A + +L L+ SS S KC ++E L G + LV ++G
Sbjct: 216 STLPDNLSMILATKPLSPILNLLKSSKKSSKTSEKCCSLIEALMVSGEEARTGLVSDEGG 275
Query: 630 RLELEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVXXXXXXX 689
L + ++ N S R+ A+ L +C+S+ + +++ +
Sbjct: 276 VLAVVEVLEN---------GSLQAREHAVGVLLTLCQSDRSKYREPILREGVIPGLLELT 326
Query: 690 XXXXXEVREIAINLLFLFSHHE-PEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAG-L 747
+ R A LL L + E P V+ P +E +V L + D Q A +
Sbjct: 327 VQGTSKSRIKAQRLLCLLRNSESPRSEVQ----PDTIENIVSSLISHIDGDDQSGKAKKM 382
Query: 748 LANLPKSELSLTMKLIE 764
LA + + + +++ ++
Sbjct: 383 LAEMVQVSMEKSLRHLQ 399
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 137 (53.3 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 47/157 (29%), Positives = 79/157 (50%)
Query: 695 EVREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKS 754
E ++ A+ + L S ++PE ++ L K ++ LV + + D+Q+ G+ A L S
Sbjct: 77 EQKQAAMEIRLL-SKNKPENRIK-LAKAGAIKPLVSLISSS---DLQLQEYGVTAVLNLS 131
Query: 755 ELSLTMKLIELDG-LNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVER-GVYP 812
++I G + ++N L+ GT KENA AL R + +E + + R G P
Sbjct: 132 LCDENKEMIVSSGAVKPLVNALRLGTPTTKENAACALLRLSQ---VEENKITIGRSGAIP 188
Query: 813 LLVNLLQIGSITAKARAAALIGTLSTSSPKFTDMPES 849
LLVNLL+ G AK A+ + +L +++ T ES
Sbjct: 189 LLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVES 225
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 108 (43.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 35/127 (27%), Positives = 67/127 (52%)
Query: 243 LQIIERYDSR--ENYIQPLNA---FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREK 297
L + + +S+ E+ I P+ F C ++ T+M++PV + +G T E+ I WL + E+
Sbjct: 52 LTCLRKVESKIPESDISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWL-KHER 110
Query: 298 TDPETGVVLEDTSLRSNSPLRQSIEEWKELNYCLNIRCCRAKLLSGIDSSELEALDQMQD 357
T P+T VL N + I +W +N + + +L++ + +S++EAL +Q
Sbjct: 111 TCPKTKQVLSHRLWIPNHLISDLITQWCLVNK-YDHQKPSDELVAELFTSDIEAL--LQR 167
Query: 358 LMRESSI 364
+ SS+
Sbjct: 168 VSSSSSV 174
Score = 78 (32.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 475 VRESAECAEKILQQLFDVD--EENFCRAAKSGWYKPLIDRII-QGAESSRILMMKALLSM 531
V S E E I+ LF++ E N A++ PL+ + + QG + +R L S+
Sbjct: 220 VDSSLELQENIVTALFNLSILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSL 279
Query: 532 ELVDSNLELLGKEGIIPPLLGLVGSGN 558
+DSN ++G + L+ L+ G+
Sbjct: 280 SAIDSNKIIIGNSEAVKALIDLIEEGD 306
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 129 (50.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 39/120 (32%), Positives = 60/120 (50%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTD-PETGVVLEDTSLRSNSPLRQS 320
F C I+ +M DPV + TG T +R +IE WL +K P T V+ +T L N LR+
Sbjct: 11 FLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHTLRRL 70
Query: 321 IEEWKELNYCLNIR--------CCRA---KLLSGIDSSEL---EALDQMQDLMRESSINK 366
I+ W LN I C++ KL+ SS L + L +++ ++ E++ NK
Sbjct: 71 IQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIVSENTTNK 130
Score = 54 (24.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 42/199 (21%), Positives = 77/199 (38%)
Query: 643 LQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVK--ANGVXXXXXXXXXXXXEVREIA 700
L+ F+SS ++ AL L+ + SE L + K N V E R A
Sbjct: 174 LENRFDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYA 233
Query: 701 INLLF-LFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLA-NLPKSELSL 758
LL L +P ++ LL+ + ++ L + H +A +L P
Sbjct: 234 ALLLKKLLEVADPMQII--LLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNR- 290
Query: 759 TMKLIELDGLNAIINILKSGTMEA-KENALSALFRFTDPTNL-EAQRNVVERGVYPLLVN 816
K +E ++ II +L T + + N+ A+ E + + G +V+
Sbjct: 291 -HKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVS 349
Query: 817 --LLQIGSITAKARAAALI 833
+L++ IT++ L+
Sbjct: 350 KKILRVSQITSERAVRVLL 368
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 134 (52.2 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 37/108 (34%), Positives = 56/108 (51%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F+C I+ VM PVSL TG T +RA+I+ WLD T P T +L++ N L++ I
Sbjct: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLI 73
Query: 322 EEWKELNYCLNIRCCRAKLLSGIDSSELEA--LDQMQDLMRESSINKD 367
E W + + R C ++S+EL A D++ D + I K+
Sbjct: 74 EIWSD---SVRRRTC-------VESAELAAPTRDEIADAIDRVKIEKE 111
Score = 47 (21.6 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 766 DGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITA 825
D L+ I+ + K+G +E K + + L F + E++ + ER L+ L++ SI+
Sbjct: 196 DRLSVIVYLFKTGNVELKIDC-AGLLEFI-AVDAESKLLIAERD--GLITELMK--SISK 249
Query: 826 KARAAALIGTLST----SSPK 842
+ + + +LS SSPK
Sbjct: 250 DSDLSLIESSLSCLIAISSPK 270
Score = 40 (19.1 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 476 RESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELV 534
R+ E KI++ + D+ A K + K L+D I Q + K+L+ E V
Sbjct: 113 RDDREVLSKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQ-VDFETTSAAKSLVVQEAV 170
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 134 (52.2 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 35/92 (38%), Positives = 43/92 (46%)
Query: 247 ERYDSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVL 306
E S N+ +P F C IT +M DP G T E AI W +R +T P L
Sbjct: 342 EEEASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRL 401
Query: 307 EDTSLRSNSPLRQSIEEWKELNYCLNI-RCCR 337
TSL N LR +I+EW +L LN CR
Sbjct: 402 PHTSLVPNLALRSAIQEWLQLRELLNRPSACR 433
Score = 45 (20.9 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 20 IKTAQAAKNVVYE-----KESFKVLSKHLFDIESVLKELQLQKLNDSQAVRLALESLEAD 74
+K A+ +NV +E KE+ K L K ++E + E + Q +R E
Sbjct: 253 LKKAKQWENVYFEELKQRKETEKALRKRNDELEKMRSESETQITESYTVIRKLQEKNNLS 312
Query: 75 VEKANNLVEK 84
+E + E+
Sbjct: 313 METFRGIREE 322
>TAIR|locus:2055033 [details] [associations]
symbol:ARABIDILLO-1 "AT2G44900" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0048527
"lateral root development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR001810
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181
SMART:SM00185 SMART:SM00256 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0048527 EMBL:AC002388 IPI:IPI00521082
PIR:T00403 RefSeq:NP_566029.1 UniGene:At.53128 HSSP:Q02248
ProteinModelPortal:O22161 SMR:O22161 PaxDb:O22161 PRIDE:O22161
EnsemblPlants:AT2G44900.1 GeneID:819099 KEGG:ath:AT2G44900
TAIR:At2g44900 eggNOG:NOG48141 HOGENOM:HOG000029512
InParanoid:O22161 OMA:MDDESAN PhylomeDB:O22161
ProtClustDB:CLSN2685043 Genevestigator:O22161 Uniprot:O22161
Length = 930
Score = 137 (53.3 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 96/386 (24%), Positives = 164/386 (42%)
Query: 463 GILFLVTLIKGPVRESAECAEKILQQLFDVDEENF---CRAA----KSGWYKPLIDRIIQ 515
G L+ L++ + E + L VD+EN C A K G + L++
Sbjct: 390 GAALLLNLMQSSQEDVQERSATGLATFVVVDDENASIDCGRAEAVMKDGGIRLLLELAKS 449
Query: 516 GAESSRILMMKALLSMELVDSNL-ELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXG 574
E + KA+ ++ V++N+ + + +EG I L GL S N
Sbjct: 450 WREGLQSEAAKAIANLS-VNANIAKSVAEEGGIKILAGLAKSMNRLVAEEAAGGLWNLSV 508
Query: 575 CSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSSDGIKFLVDEKGNRLELE 634
+++ I+ AGG+ +++L+F P+ C +LE+ + D+K + +E+
Sbjct: 509 GEEHKNAIAQAGGVKALVDLIF--RWPNG----CDGVLERAAGALANLAADDKCS-MEVA 561
Query: 635 PI--VTNLLTLQQNFNSSYNVRKPALRALFRICK-SEAELVKIAVVKANGVXXXXXXXXX 691
V L+ L +N V++ A RAL + ++ AV + G
Sbjct: 562 KAGGVHALVMLARNCKYE-GVQEQAARALANLAAHGDSNNNNAAVGQEAGALEALVQLTK 620
Query: 692 XXXE-VREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLEN--DAKHDVQMAAAGLL 748
E VR+ A L+ S + E + +EALV ++ +A +Q AAG L
Sbjct: 621 SPHEGVRQEAAGALWNLSFDDKNR--ESISVAGGVEALVALAQSCSNASTGLQERAAGAL 678
Query: 749 ANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFT-DPTNLEAQRNVVE 807
L SE + ++ + G+ +I + +S + E A AL+ +P N A R +VE
Sbjct: 679 WGLSVSEAN-SVAIGREGGVPPLIALARSEAEDVHETAAGALWNLAFNPGN--ALR-IVE 734
Query: 808 RGVYPLLVNLLQIGSITAKAR-AAAL 832
G P LV+L S++ AR AAL
Sbjct: 735 EGGVPALVHLCS-SSVSKMARFMAAL 759
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 134 (52.2 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 31/77 (40%), Positives = 41/77 (53%)
Query: 250 DSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDT 309
D E YI + FKC I+ VM PVSL TG T +RA+I+ WLD T P T +L+
Sbjct: 4 DETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTK 63
Query: 310 SLRSNSPLRQSIEEWKE 326
N L++ I W +
Sbjct: 64 DFVPNLTLQRLINIWSD 80
Score = 43 (20.2 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 30/129 (23%), Positives = 60/129 (46%)
Query: 717 EYLLKPKR-LEALVGFLEND-AKHDVQMAAAGLLANLPKSELSLTMKLIELDG---LNAI 771
E+L K + LV + K ++ + A +L ++ L+ ++ DG L AI
Sbjct: 135 EFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIKVDRERLSNLMLANDGGDCLTAI 194
Query: 772 INILKSGTMEAKENALSALFRFTDPTNLEAQRN--VVER-GVYPLLVNLLQIGSITAKAR 828
+ ++ G +E+K ++ L D + +A+ + ER GV L +++ SIT +
Sbjct: 195 LLAIQRGNLESKIESVRVL----DWISFDAKSKLMIAERDGV---LTEMMKSISITESSD 247
Query: 829 AAALIGTLS 837
+ + +LS
Sbjct: 248 PSLIEASLS 256
Score = 41 (19.5 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 856 RPSRAHLCQVHGGICSESTSFCLLKAN--ALPHLVKLL 891
R R +C G C E LLK + A H V +L
Sbjct: 309 REGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTIL 346
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 524 MMKALLSMELVDSNLELLGKE-GIIPPLLGLV 554
+MK + ++ DSN E L K+ +P L+ ++
Sbjct: 120 LMKIVRFVKDSDSNREFLSKKMEFVPMLVDII 151
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 12/52 (23%), Positives = 22/52 (42%)
Query: 428 DPSISLAAVKLLYELMQDRSGWNVAVCRKLSQQCSGILFLVTLIKGPVRESA 479
DPS+ A++ L + + + + + K + IL TL V E +
Sbjct: 247 DPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEKS 298
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 105 (42.0 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 25/71 (35%), Positives = 34/71 (47%)
Query: 258 PLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPL 317
P +C I+ +M DPV + +G T ER IE W T P+T L SL N+ +
Sbjct: 272 PPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCV 331
Query: 318 RQSIEEWKELN 328
+ I W E N
Sbjct: 332 KGLIASWCEQN 342
Score = 76 (31.8 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 39/162 (24%), Positives = 66/162 (40%)
Query: 25 AAKNVVYEKESFKVLSKHLFDIESVLKELQLQKLNDSQAVRLALESLEADVEKANNLVEK 84
AA + + K LS L + S+ L+ + ++ AL SL +EKA N+++
Sbjct: 12 AASDAKLHGDMCKELSGVLCKVLSIFPSLEGARPRSKSGIQ-ALCSLHIALEKAKNILQH 70
Query: 85 YKNKSRFYLLVKCRYIVNEIQEVTRNIGRSLASLSLANTEVLSEISDQMNRLQNEMQRVE 144
S+ YL + ++ + ++ + + L V S I Q+ + E++
Sbjct: 71 CSECSKLYLAITGDAVLLKFEKAKIAL---IDGLKRVEDIVPSSIGSQILEIVGELENTR 127
Query: 145 FKASQS------QIVDKLNQGLRDQKLDQGFANDMLEEIARA 180
F S QI+ L QG +K D N LE RA
Sbjct: 128 FMLDPSEKEVGDQIIALLQQG---KKFDNCNDNTELEIFHRA 166
Score = 49 (22.3 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 23/102 (22%), Positives = 40/102 (39%)
Query: 870 CSESTSFCLLKANALPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRGVNVLHQEEAIK 929
C + + + A+P LV+LLQ + + L L + L IK
Sbjct: 539 CLDEAKSVIGSSQAVPFLVQLLQKEIETQC--KLDALHALYNLSTYSPNIPALLSSNIIK 596
Query: 930 PTLEIL-TWGTDSLKEEALGFLEKVFMSKEMVDTYGSSARLL 970
+L + G + E++L L + S+E D SS ++
Sbjct: 597 SLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMI 638
Score = 40 (19.1 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 7/23 (30%), Positives = 17/23 (73%)
Query: 535 DSNLELLGKEGIIPPLLGLVGSG 557
+S ++++ +EG+IP L+ + +G
Sbjct: 668 ESCIQMVLQEGVIPSLVSISVNG 690
Score = 38 (18.4 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 25/113 (22%), Positives = 48/113 (42%)
Query: 449 WNVAVCRKLSQQC---SGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGW 505
+N+AV +++ SG++ L+ + ES A + L +DE S
Sbjct: 495 FNLAVNNNRNKELMLTSGVIRLLEKMISSA-ESHGSATALYLNLSCLDEAK--SVIGSSQ 551
Query: 506 YKPLIDRIIQGAESSRILM--MKALLSMELVDSNLELLGKEGIIPPLLGLVGS 556
P + +++Q ++ + + AL ++ N+ L II L GL+ S
Sbjct: 552 AVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLAS 604
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 101 (40.6 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 27/100 (27%), Positives = 54/100 (54%)
Query: 230 RDYEEVKKQYFQRLQIIERYDSR--ENYIQPLNA---FKCRITGTVMMDPVSLYTGTTCE 284
+D+ E+ + + L + + +S+ E+ I P+ F C ++ +M++P+ + +G T E
Sbjct: 33 KDHCEIDEA-IRILTCLRKIESKNPESDISPVEVPKEFICTLSNKIMIEPMLIASGQTFE 91
Query: 285 RAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSIEEW 324
++ I WL + E+T P T VL + N + + I+EW
Sbjct: 92 KSYILEWL-KHERTCPRTKQVLYHRFMIPNHLINEVIKEW 130
Score = 77 (32.2 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 43/200 (21%), Positives = 85/200 (42%)
Query: 480 ECAEKILQQL--FDVDEENFCRAAKSGWYKPLIDRII-QGAESSRILMMKALLSMELVDS 536
E E I+ L F E+N A++ PL+ + + QG +RI + S+ DS
Sbjct: 214 EFLENIVTALHIFSTSEKNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDS 273
Query: 537 NLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXGCSKNRELISAAGGIPQVLELMF 596
N ++G ++ L+ ++ G+ + E + G I ++ +
Sbjct: 274 NKIIIGNSEVLKALIHVIEEGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIK 333
Query: 597 SSHVPSNIIVKCSEILEKLSSDGIKFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKP 656
+ SN+ + S +L +S+ + E+ + L L + +L ++ +N NS N
Sbjct: 334 AG---SNVSMLLS-LLAFVSTQNHQ--TTEEMDNLGL---IYDLFSILRNSNSLVNDEN- 383
Query: 657 ALRALFRICKSEAELVKIAV 676
A+ ++ ICKS L + +
Sbjct: 384 AVVIVYNICKSYKALQNVVL 403
Score = 68 (29.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 725 LEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIEL--DGLNAII---NILKSGT 779
LE+L+ + + + + Q AA LA K S+ + + D + ++ +I +
Sbjct: 153 LESLLQRISSPSSVEDQTEAAKELALKAKRFSSVCVYFVAKIPDSITRLLTPLSISEDSN 212
Query: 780 MEAKENALSALFRFTDPTNLEAQRNVVERG-VYPLLVNLLQIGSITAKARAAALIGTLS- 837
E EN ++AL F+ T+ + + V E V PLL ++ G++ + +AA + +LS
Sbjct: 213 PEFLENIVTALHIFS--TSEKNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSY 270
Query: 838 TSSPK 842
T S K
Sbjct: 271 TDSNK 275
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 130 (50.8 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F+C I+ +M DPV++ TG T +R +I++W+ T P T V L D +L N LR+ I
Sbjct: 18 FRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTLRRLI 77
Query: 322 EEW 324
+EW
Sbjct: 78 QEW 80
Score = 48 (22.0 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 32/144 (22%), Positives = 60/144 (41%)
Query: 650 SYNVRKPALRALFRICK-SEAELVKIAVVKANGVXXXXXXXXXXXXEVRE--IAINLLFL 706
S R A+R L + + SE V IA A + + ++ +L L
Sbjct: 120 SVRSRAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALL 179
Query: 707 FSHHEPEGVVEYLLK-PKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIEL 765
H E E + P R+ + L D+ ++++ AA L+ + S+ +KLI +
Sbjct: 180 VLLHMTETECEAVASDPSRVGFMTRLLF-DSSIEIRVNAAALIEMVLTGAKSMDLKLI-I 237
Query: 766 DGLNAIINILKSGTMEAKENALSA 789
G ++I G ++ +N +S+
Sbjct: 238 SGSDSIFE----GVLDLLKNPISS 257
Score = 45 (20.9 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 594 LMFSSHVPSNIIVKCSEILEKLSSDGIKFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNV 653
L+F S + I V + ++E + + G K + D K + I +L L +N SS
Sbjct: 205 LLFDSSI--EIRVNAAALIEMVLT-GAKSM-DLKLIISGSDSIFEGVLDLLKNPISSRRA 260
Query: 654 RKPALRALFRIC 665
K ++A+F +C
Sbjct: 261 LKIGIKAIFALC 272
Score = 42 (19.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 777 SGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAAALIGTL 836
S + ++ AL L T+ T EA + R + + LL SI + AAALI +
Sbjct: 168 SSELVSESLALLVLLHMTE-TECEAVASDPSRVGF--MTRLLFDSSIEIRVNAAALIEMV 224
Query: 837 STSSPKFTDM 846
T + K D+
Sbjct: 225 LTGA-KSMDL 233
Score = 38 (18.4 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 812 PLLVN-LLQIGSITAKARAAALIGTLSTSSPKFTDMPESAG 851
PL+V +L++ + A AL+ L T+ + D +AG
Sbjct: 331 PLMVKTILRVSDRATEYAAGALLA-LCTAEERCRDEAAAAG 370
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F C IT +M DPV G + ER AIEAW+ + +T P T + L+ T L N L+ +I
Sbjct: 421 FLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRTLKMAI 480
Query: 322 EEW 324
W
Sbjct: 481 FRW 483
>SGD|S000005133 [details] [associations]
symbol:SRP1 "Karyopherin alpha homolog" species:4932
"Saccharomyces cerevisiae" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0016021
"integral to membrane" evidence=ISM] [GO:0006612 "protein targeting
to membrane" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0006606 "protein import into nucleus"
evidence=IEA;IMP] [GO:0008565 "protein transporter activity"
evidence=IEA;IDA] [GO:0000176 "nuclear exosome (RNase complex)"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 SGD:S000005133
GO:GO:0016021 GO:GO:0005634 GO:GO:0005737 GO:GO:0048471
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006612
GO:GO:0008565 EMBL:BK006947 eggNOG:COG5064 GO:GO:0006606 PDB:1WA5
PDBsum:1WA5 HOGENOM:HOG000167616 OMA:QPDWTTI
GeneTree:ENSGT00610000085856 OrthoDB:EOG408RH7 EMBL:M75849
EMBL:Z71465 PIR:S30884 RefSeq:NP_014210.1 PDB:1BK5 PDB:1BK6
PDB:1EE4 PDB:1EE5 PDB:1UN0 PDB:2C1T PDBsum:1BK5 PDBsum:1BK6
PDBsum:1EE4 PDBsum:1EE5 PDBsum:1UN0 PDBsum:2C1T
ProteinModelPortal:Q02821 SMR:Q02821 DIP:DIP-728N IntAct:Q02821
MINT:MINT-386354 STRING:Q02821 PaxDb:Q02821 PeptideAtlas:Q02821
EnsemblFungi:YNL189W GeneID:855532 KEGG:sce:YNL189W CYGD:YNL189w
EvolutionaryTrace:Q02821 NextBio:979583 Genevestigator:Q02821
GermOnline:YNL189W Uniprot:Q02821
Length = 542
Score = 127 (49.8 bits), Expect = 0.00022, P = 0.00022
Identities = 84/364 (23%), Positives = 145/364 (39%)
Query: 636 IVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVXXXXXXXXXXXXE 695
+V L+ + N ++ A AL I + K+ VV A+ V E
Sbjct: 131 VVPRLVEFMRE-NQPEMLQLEAAWALTNIASGTSAQTKV-VVDADAVPLFIQLLYTGSVE 188
Query: 696 VREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSE 755
V+E AI L + + +Y+L+ +E ++G L N K + A L+NL + +
Sbjct: 189 VKEQAIWALGNVAGDSTD-YRDYVLQCNAMEPILG-LFNSNKPSLIRTATWTLSNLCRGK 246
Query: 756 LSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLV 815
+ L + ++ S E +A A+ +D EA + V++ + LV
Sbjct: 247 KPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQ-EAIQAVIDVRIPKRLV 305
Query: 816 NLLQIGSITAKARAAALIGTLSTSSPKFTDMPESAGCW-CFR-----PS---RAHLCQVH 866
LL S + A +G + T + T + +AG R P + C
Sbjct: 306 ELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 365
Query: 867 GGICSESTSF--CLLKANALPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRGV-NVLH 923
I + +T ++ AN +P LVKLL+ + T EA +S G Q+ + L
Sbjct: 366 SNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLV 425
Query: 924 QEEAIKPTLEILTWGTDSLKEEALGFLEKVFMSKEMVDTYGSSARLLLVPLTSRNVHEDG 983
+ IKP ++L + + E L LE + E D AR L + + + + G
Sbjct: 426 SQGCIKPLCDLLEIADNRIIEVTLDALENILKMGE-AD---KEARGLNINENADFIEKAG 481
Query: 984 SLER 987
+E+
Sbjct: 482 GMEK 485
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 117 (46.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 59/275 (21%), Positives = 106/275 (38%)
Query: 493 DEENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLG 552
+E N K+G PLI + S R L A+L++ +N ++ G+ P L+
Sbjct: 121 NERNKIEIVKAGAVPPLIQILKLHNASLRELATAAILTLSAAPANKAMIISSGVPPLLIQ 180
Query: 553 LVGSGNFQXXXXXXXXXXXXXGCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEIL 612
++ SG Q C + I A + ++ L+ S K + ++
Sbjct: 181 MLSSGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLKECKKHSKFAEKATALV 240
Query: 613 EKLSSDGIKFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNVR-KPALRALFRICKSEAEL 671
E + S E G R + +LTL + + + A+ AL +C+S+ +
Sbjct: 241 EMILSHS------EDG-RNAITSCEDGILTLVETVEDGSPLSIEHAVGALLSLCRSDRDK 293
Query: 672 VKIAVVKANGVXXXXXXXXXXXXEVREIAINLLFLFSHHEPEGVVEYLLKPKRLEALV-G 730
+ ++K + + R+ A LL L P E + P LE +V G
Sbjct: 294 YRKLILKEGAIPGLLSSTVDGTSKSRDRARVLLDLL-RETPR---EKEMTPLTLEKIVYG 349
Query: 731 F-LENDAKHDVQMAAAGLLANLPKSELSLTMKLIE 764
++ D A LL ++ + L+MK I+
Sbjct: 350 IAVQVDGAEKAAETAKKLLQDMVHRSMELSMKSIQ 384
Score = 54 (24.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 22/104 (21%), Positives = 39/104 (37%)
Query: 324 WKELNYCLNIRCCRAKLLSGIDSSELEALDQMQDLMRESSINKDWXXXXXXXXXX--XXX 381
WK L + + KLL G +EA +++ L+R+S +
Sbjct: 39 WKTTKELLILHLSK-KLLHGDLDFRIEAAKEIRKLLRKSPVKSSARSKLADAGVIPPLVP 97
Query: 382 XXXXHNKDVKMKILITLKQLVKGHARNKEKVIDYGGWDHIVPCL 425
N D + L+ L L + RNK +++ G ++ L
Sbjct: 98 MLFSSNVDARHASLLALLNLAVRNERNKIEIVKAGAVPPLIQIL 141
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 94 (38.1 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 31/143 (21%), Positives = 64/143 (44%)
Query: 492 VDEENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLL 551
+++ N + +SG+ LID + G+ ++ ++ AL S+ + + N ++G G + PLL
Sbjct: 254 LEKPNKLKIVRSGFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGVLGAVEPLL 313
Query: 552 GLVGSGNFQXXXXXXXXXXXXXGC-SKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSE 610
+ S + NR + AG +P +L ++ S S I++
Sbjct: 314 HALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSGESASRILLLLCN 373
Query: 611 ILEKLSSDGIKFLVDEKGNRLEL 633
+ S+G ++D GN + +
Sbjct: 374 LAA--CSEGKGAMLD--GNAVSI 392
Score = 73 (30.8 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 21/91 (23%), Positives = 43/91 (47%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F C ITG +M DPV + +G T ER +++ + G + +++ N ++ +I
Sbjct: 14 FLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLSTVIPNLAMKSTI 73
Query: 322 EEWKELNYCLNIRCCRAKLLSGIDSSELEAL 352
W + N + R + G+ + +++L
Sbjct: 74 LSWCDRNKMEHPRPPDYAYVEGVVRTRMDSL 104
Score = 50 (22.7 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 765 LDG--LNAIINILK-SGTME----AKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNL 817
LDG ++ ++ L+ SG E A+EN + AL + N+ + E G +L +
Sbjct: 385 LDGNAVSILVGKLRESGGAESDAAARENCVGALLTLS-VGNMRFRGLASEAGAEEILTEI 443
Query: 818 LQI--GSITAKARAAALIGTLSTSSPKFTDMPES 849
++ GS K +A+ ++ TL +F + E+
Sbjct: 444 VESESGSGRLKEKASKILQTLRGGGSEFGEGAEA 477
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 116 (45.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F+C I+ +M DPV + TG T +R +IE W++ KT P T VL N +R+ I
Sbjct: 35 FQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTIRKMI 94
Query: 322 EEW 324
+ W
Sbjct: 95 QGW 97
Score = 54 (24.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 17/73 (23%), Positives = 30/73 (41%)
Query: 761 KLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQI 820
KL + +LKS ++NA + VE GV LV L++
Sbjct: 207 KLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVAEALVKLIR- 265
Query: 821 GSITAKARAAALI 833
S+++ + ++LI
Sbjct: 266 DSVSSSSTKSSLI 278
Score = 53 (23.7 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 15/69 (21%), Positives = 32/69 (46%)
Query: 782 AKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIG-SITAKARAAALIGTLSTSS 840
A +++S + + N A + V G + ++ +LQ+G K +A L+ ++T
Sbjct: 356 ATRSSMSMILKLWKTGNTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMMNTQM 415
Query: 841 PKFTDMPES 849
+D +S
Sbjct: 416 KLMSDCVDS 424
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 98 (39.6 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 24/71 (33%), Positives = 33/71 (46%)
Query: 258 PLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPL 317
P +C I+ +M DPV + +G T ER IE W + P+T L SL N +
Sbjct: 275 PPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCV 334
Query: 318 RQSIEEWKELN 328
+ I W E N
Sbjct: 335 KGLIASWCEQN 345
Score = 75 (31.5 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 33/154 (21%), Positives = 67/154 (43%)
Query: 25 AAKNVVYEKESFKVLSKHLFDIESVLKELQLQKLNDSQAVRLALESLEADVEKANNLVEK 84
AA + + K LS + S+ L+ + ++ L SL +EKA N+++
Sbjct: 12 AASDAKLHGDMCKELSAVYCKVLSIFPSLEEARPRSKSGIQ-TLCSLHIALEKAKNILQH 70
Query: 85 YKNKSRFYLLVKCRYIVNEIQEVTRNIGRSLASLSLANTEVLSEISDQMNRLQNEMQRVE 144
S+ YL + ++ + ++ + + SL V S I Q+ + E++ +
Sbjct: 71 CSECSKLYLAITGDAVLLKFEKAKSAL---IDSLRRVEDIVPSSIGSQILDIVGELEHTK 127
Query: 145 F--KASQSQIVDKLNQGLRD-QKLDQGFANDMLE 175
F S+ ++ D++ L+ +K D G + LE
Sbjct: 128 FLLDPSEKEVGDRIIALLQQGKKFDNGSDSTELE 161
Score = 48 (22.0 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 576 SKNRELISAAGGIPQVLELMFS---SHVPSNIIVKCSEILEKL-----SSDGIKFLVD 625
++N+EL+ +G IP +LE M S S P+ + LEK SS + F V+
Sbjct: 502 NRNKELMLTSGVIP-LLEKMISCSQSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVN 558
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 120 (47.3 bits), Expect = 0.00049, P = 0.00049
Identities = 32/88 (36%), Positives = 43/88 (48%)
Query: 242 RLQIIERYDSRENYIQP-LNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDP 300
R + IE+ S E+ P L FKC I+ +M DP G T E WL +T P
Sbjct: 216 RKETIEKSKSNESDEDPRLEDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSP 275
Query: 301 ETGVVLEDTSLRSNSPLRQSIEEWKELN 328
+T LE+ +L N LR I++W E N
Sbjct: 276 KTNKPLENHNLVPNHTLRIIIKDWLEKN 303
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 123 (48.4 bits), Expect = 0.00050, P = 0.00050
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F C IT +M DP+ G + E+ A+E W+ R+++T P T +VL L N L+ +I
Sbjct: 407 FICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTLKMAI 466
Query: 322 EEW 324
+ W
Sbjct: 467 DRW 469
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 123 (48.4 bits), Expect = 0.00050, P = 0.00050
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F C IT +M DP+ G + E+ A+E W+ R+++T P T +VL L N L+ +I
Sbjct: 408 FICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTLKMAI 467
Query: 322 EEW 324
+ W
Sbjct: 468 DRW 470
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 99 (39.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 30/120 (25%), Positives = 54/120 (45%)
Query: 492 VDEENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLL 551
++++N + +SG+ LID + G ++ + AL S+ L D N ++G G + PLL
Sbjct: 305 LEKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLGAVEPLL 364
Query: 552 GLVGSGNFQXXXXXXXXXXXXXGC-SKNRELISAAGGIPQVLELMFSSHVPSNII-VKCS 609
+ S + NR + AG +P +L ++ S S I+ V C+
Sbjct: 365 HALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRILLVLCN 424
Score = 72 (30.4 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEA-----WL-DRREKTDPETGVVLEDTSLRS 313
F C ITG +M DPV + +G T ER +++ ++ D + T P+ V+ + +++S
Sbjct: 35 FLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVIPNLAMKS 92
>POMBASE|SPBC354.14c [details] [associations]
symbol:vac8 "vacuolar protein Vac8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000011 "vacuole
inheritance" evidence=ISO] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0000324 "fungal-type vacuole" evidence=ISO]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016236
"macroautophagy" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] [GO:0043495 "protein anchor" evidence=ISO]
[GO:0071255 "CVT vesicle assembly" evidence=ISO] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 PomBase:SPBC354.14c GO:GO:0005794 GO:GO:0043234
GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG5064
GO:GO:0000329 GO:GO:0043495 GO:GO:0000011 HSSP:Q02248 GO:GO:0016236
GO:GO:0042144 KO:K08332 PANTHER:PTHR23315:SF8 PIR:T40294
RefSeq:NP_595238.1 ProteinModelPortal:O43028 STRING:O43028
EnsemblFungi:SPBC354.14c.1 GeneID:2541010 KEGG:spo:SPBC354.14c
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 NextBio:20802124
GO:GO:0071255 Uniprot:O43028
Length = 550
Score = 122 (48.0 bits), Expect = 0.00079, P = 0.00079
Identities = 74/373 (19%), Positives = 149/373 (39%)
Query: 470 LIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALL 529
L++ P E A L L V+ EN K LI +++ + + +
Sbjct: 93 LLQSPDAEIQRAASVALGNLA-VNAENKALVVKLNGLDLLIRQMMSPHVEVQCNAVGCIT 151
Query: 530 SMELVDSNLELLGKEGIIPPLLGLVGSGNFQXXXXXXXXXXXXXGCSKNRELISAAGGIP 589
++ +D N + G + PL L S + + +NR+ + +AG IP
Sbjct: 152 NLATLDENKSKIAHSGALGPLTRLAKSKDIRVQRNATGALLNMTHSYENRQQLVSAGTIP 211
Query: 590 QVLELMFSSHVPSNIIVKCSEILEKLSSDGIKFLVDEKGNRLELEP-IVTNLLTLQQNFN 648
++ L+ SS +++ C+ + ++ D + + + EP +V +L+ L
Sbjct: 212 VLVSLLPSSD--TDVQYYCTTSISNIAVDAV-----HRKRLAQSEPKLVRSLIQLMDT-- 262
Query: 649 SSYNVRKPALRALFRICKSEAELVKIAVVKANGVXXXXXXXXXXXXEVREIAINLLFLFS 708
SS V+ A AL + E +I +V++N + + ++ + S
Sbjct: 263 SSPKVQCQAALALRNLASDER--YQIEIVQSNALPSLLRLLRSSYLPLILASVACIRNIS 320
Query: 709 HHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGL 768
H P ++ L LV L ++Q A L NL S +IE + +
Sbjct: 321 IH-PLNESP-IIDAGFLRPLVDLLSCTENEEIQCHAVSTLRNLAASSERNKRAIIEANAI 378
Query: 769 NAIINILKSG--TMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITAK 826
+ ++ +++++ A A+ +D E + ++ G+ +L+ L SI +
Sbjct: 379 QKLRCLILDAPVSVQSEMTACLAVLALSD----EFKSYLLNFGICNVLIPLTDSMSIEVQ 434
Query: 827 ARAAALIGTLSTS 839
+AA +G LS++
Sbjct: 435 GNSAAALGNLSSN 447
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 121 (47.7 bits), Expect = 0.00081, P = 0.00081
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F C IT +M DPV G + ER A+E+W+ ++++T P T + L L N L+ +I
Sbjct: 406 FICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLKMAI 465
Query: 322 EEWKE 326
W E
Sbjct: 466 NRWLE 470
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 121 (47.7 bits), Expect = 0.00082, P = 0.00082
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F C IT +M DPV G + E+ A+E W+ ++++T P T +VL L N L+ +I
Sbjct: 408 FICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLKMAI 467
Query: 322 EEWKE 326
W E
Sbjct: 468 NRWLE 472
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 121 (47.7 bits), Expect = 0.00082, P = 0.00082
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F C IT +M DPV G + ER A+E+W+ ++++T P T + L L N L+ +I
Sbjct: 408 FICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLKMAI 467
Query: 322 EEWKE 326
W E
Sbjct: 468 NRWLE 472
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1012 955 0.00095 122 3 11 22 0.40 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 51
No. of states in DFA: 623 (66 KB)
Total size of DFA: 396 KB (2194 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 83.20u 0.09s 83.29t Elapsed: 00:00:03
Total cpu time: 83.21u 0.09s 83.30t Elapsed: 00:00:03
Start: Mon May 20 22:45:23 2013 End: Mon May 20 22:45:26 2013