BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001796
(1012 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CAA7|PUB42_ARATH Putative U-box domain-containing protein 42 OS=Arabidopsis thaliana
GN=PUB42 PE=2 SV=1
Length = 1033
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 248/1034 (23%), Positives = 441/1034 (42%), Gaps = 117/1034 (11%)
Query: 68 LESLEADVEKANNLVEKYKNKSRFYLLVKCRYIVNEIQEVTRNIGRSLASLSLANTEVLS 127
ESL V+ A LVEK + + R I + V + +G +L S+ + +
Sbjct: 17 FESLSDSVDVAKKLVEKSQESNEAESTTDLRSIEAGFEGVVKQMGETLQSIPESTFDEEE 76
Query: 128 EISDQMNRLQNEMQRVEF-KASQSQIVDKLNQGLRDQKLDQGFANDMLEEIARAVGVPVE 186
I + L NEMQ S+S+++ N G QK+ D++ E P +
Sbjct: 77 YIGVVIQSLSNEMQNATIGDGSKSEMI---NNG--QQKISAKHTPDIVSEQMEEDLYPTD 131
Query: 187 PS--------------------EISKELASFRREKEEAANRKERAEVLFLDQVIELLSRA 226
P +I + R+++ + + ++ V + + +
Sbjct: 132 PEFSYESYMMYSESQSQMTDIPDIPSKSTDVSRQRKHGNHSESQSLVTEIPDIPSQSTNV 191
Query: 227 DAARDYEEVKKQYFQRLQIIE------RYDSRENYIQ-----------------PLNAFK 263
+ R + + K Q +I + S+ Y P AF
Sbjct: 192 SSQRKHGNLSKSQSQSTEIPDIPSQSSNASSQRKYGNLSESLSMLPQVTQFMEPPYQAFI 251
Query: 264 CRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTD----PETGVVLEDTSLRSNSPLRQ 319
C +T +M DPV+ TG TCER A+ W D +D P TG L T L +N L+
Sbjct: 252 CPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKL-TTELSANVVLKT 310
Query: 320 SIEEWKELNYCLNIRCCRAKL-LSGIDSSELEALDQMQDLMRESSINKDWISIGGITDII 378
I+EWK N I+ A L L G +S ++AL +Q NK + GI ++
Sbjct: 311 IIQEWKVRNEAARIKVAHAALSLGGSESMVIDALRDLQMTCEGKEYNKVQVREAGIIQLL 370
Query: 379 ISILGSSHNKDVKMKILITLKQLVKGHARN-KEKVIDYGGWDHIVPCLGRDPS-ISLAAV 436
L + +KDV+ ++L L+ L + KE ++ ++ LG + AA
Sbjct: 371 DRYL-TYRSKDVRFELLKFLRTLADEETDDGKEMIVKTITMSCVIKLLGSSHQPVRHAAQ 429
Query: 437 KLLYELMQDRSGWNVAVCRKLSQQCSGILFLVTLIKGPVRES--AECAEKILQQLFDVDE 494
LL EL + + C K+ IL LVT +S +E +++IL+ L E
Sbjct: 430 ALLLELSKSQHA-----CEKIGTARGAILMLVTAKYNRELDSFASETSDQILRNLEKCPE 484
Query: 495 ENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLV 554
N + A+SG +PL+ + +G+E +++ M L+ +++ + E P L+GLV
Sbjct: 485 -NIKQMAESGLLEPLLGHLAEGSEETQVAMAAYLVEIDIGHEKKTYVA-EKACPALIGLV 542
Query: 555 GSGNFQSKELSLSVLVKLSGCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSE---I 611
S N ++ + L +S N +++ G I ++E MF+ V S+++ +E I
Sbjct: 543 QSENIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVEEMFTKRVFSDLMNSRNEAATI 602
Query: 612 LEKLSSDGIK---FLVDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSE 668
L + G++ F V+ G+ L + V N++ + +N +S ++ +R L + KS
Sbjct: 603 LANILESGLEHETFEVNTHGHTLGSDYFVYNIIHMLKN-SSPDDLNIDLIRILLSLSKSP 661
Query: 669 AELVKI-AVVKANGVSL-ILSLLDDTDSEVREIAINLLFLFSHHEPEGVVEYLLKPK-RL 725
+ I +V+K S ++ L+++ E+ A+ LL + + + E L K + +
Sbjct: 662 RAMATIVSVIKETDASFAMIELINNPHDELGVGALKLLIALTPYIGHTLSERLCKTRGQP 721
Query: 726 EALVGF-LENDAKHDVQMAAAGLLANLPKSELSLTMKLIE----LDGLNAIINILKSGTM 780
E L+ +E + + +A LLA LP L+L + L+ + L+AI I +SG
Sbjct: 722 ENLIQCPVEANQITEKHAVSAKLLAKLPHQNLTLNLALVNESIVSEILHAIHLIQRSGAR 781
Query: 781 EAK------ENALSALFRFT----DPTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAA 830
++ E + L RFT +P + RN + + V+LL S R +
Sbjct: 782 TSRYATDFLEGLVGILVRFTTTLYEPQMMYLARN---HDLTSVFVDLLMKTSSDEVQRLS 838
Query: 831 AL------IGTLSTSSP------KFT---DMPESAGCWCFRPSRAHLCQVHGGICSESTS 875
A T++ S P KF MP S + + +C +H G+CS +
Sbjct: 839 ATGLENLSSTTMTLSRPPQPRSTKFMGSLSMPRSFSLRSSKKKQIEICAIHRGVCSAKNT 898
Query: 876 FCLLKANALPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQ-QRGVNVLHQEEAIKPTLE- 933
FCL++ANA+ L+ LQ A+ + TL+ + + ++ +++L + A++ L
Sbjct: 899 FCLVEANAITKLLACLQSDKVEVVESALAAICTLLDDKVEVEKSLSMLSEMNAVQLILNA 958
Query: 934 ILTWGTDSLKEEALGFLEKVFMSKEMVDTYG---SSARLLLVPLTSRNVHEDGSLERKAA 990
+ +SL ++A ++K + D Y S R+L L S DG+ + A
Sbjct: 959 VKEHKKESLLQKAFWMIDKFIIRGG--DKYASEISQDRMLSGMLVSAFHRGDGNTRQMAE 1016
Query: 991 KVLSLIERYSRSST 1004
+L +++ ST
Sbjct: 1017 NILRRLDKMPSFST 1030
>sp|Q9SFX2|PUB43_ARATH U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43
PE=2 SV=1
Length = 811
Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 202/747 (27%), Positives = 345/747 (46%), Gaps = 51/747 (6%)
Query: 261 AFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDR-REKTDPETGVV----LEDTSLRSNS 315
AF C +T VM +PV+L G T ER AIE W RE P + + L T L +
Sbjct: 28 AFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPSI 87
Query: 316 PLRQSIEEWKELNYCLNIRCCRAKL-LSGIDSSELEALDQMQDLMRESSINKDWISIGGI 374
LR +IEEW+ N L + R L L +++ L AL ++++ R + + +
Sbjct: 88 ALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQRVCNPQL 147
Query: 375 TDIIISILGSSHNKDVKMKILITLKQLVKGHARNKEKVIDYGGWDHIVPCLGRDPSISL- 433
+I +L SS + +V+ K L TL+ +V+G +K V + IV L ++PS
Sbjct: 148 VRLITDMLKSSSH-EVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSKGRE 206
Query: 434 AAVKLLYELMQDRSGWNVAVCRKLSQQCSGILFLVTLI--KGPVRESAECAEKILQQLFD 491
AAV +L+EL + A+C K+ I+ LV L K + E A+K L L +
Sbjct: 207 AAVSVLFELSKSE-----ALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNL-E 260
Query: 492 VDEENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLL 551
EEN + A +G +PL+ ++++G+ +++ M L + L +++++++ + + L+
Sbjct: 261 RSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLAL-NNDVKVIVAQTVGSSLI 319
Query: 552 GLVGSGNFQSKELSLSVLVKLSGCSKNRELISAAGGIPQVLELMF---SSHVPSNIIVKC 608
L+ + + +E +L L +S + +L+ G +P +++ +F + +P +
Sbjct: 320 DLMRTRDMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLFYVGPNQLPIRLKEVS 379
Query: 609 SEILEKLSSDGIKF---LVDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPALRALFRIC 665
+ IL + + G F V L E IV NLL L N + A+ C
Sbjct: 380 ATILANIVNIGYDFDKVPVGPHHQTLVSEEIVENLLQLTSNTGPEIQGKLLAVLVGLTSC 439
Query: 666 KSEAELVKIAVVKANGV-SLILSLLDDTDSEVREIAINLLFLFSHHEPEGVVEYLLKP-K 723
+ V A+ + + SL+ + + ++R +I LL S H E + L
Sbjct: 440 PNSVINVVSAIRNSAAIISLVQFVEIHENDDLRLASIKLLHNISPHMSEELANALRSTVG 499
Query: 724 RLEALVGFLENDAKH--DVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINIL---KSG 778
+L +LV + + + Q AAAGLLA LP+ +L LTM+L+ II+ + + G
Sbjct: 500 QLGSLVSIISENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGAFEKIISKIVGIRQG 559
Query: 779 TMEAK-------ENALSALFRFTDPTNLEAQRNVV--ERGVYPLLVNLLQIGSITAKARA 829
+ E +S L R T E + E+ + L ++LLQ S RA
Sbjct: 560 EIRGIRFERTFLEGLVSILARITFALTKETDATLFCCEKNLPSLFLDLLQSNSQDNIQRA 619
Query: 830 AAL-IGTLSTSSPKFTDMPESA---------GCWCFRPSRAHLCQVHGGICSESTSFCLL 879
+A + LS S T +PE C P +C++H GICS SFCL+
Sbjct: 620 SATALENLSLESKNLTKIPELPPPTYCVSIFSCLSKPPVVLGICKIHQGICSVRESFCLV 679
Query: 880 KANALPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQ-QRGVNVLHQEEAIKPTLEILTWG 938
+ A+ LV LL A+ LSTL+++G +GV ++ + + I P L +L
Sbjct: 680 EGQAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVVQGVRLIDEADGITPILNVLLEN 739
Query: 939 -TDSLKEEALGFLEKVFMSKEMVDTYG 964
T++L+ A+ +E++ +E+ G
Sbjct: 740 RTENLRIRAVWMVERILRIEEIAREVG 766
>sp|Q9LM76|PUB44_ARATH U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44
PE=1 SV=1
Length = 801
Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 200/751 (26%), Positives = 353/751 (47%), Gaps = 51/751 (6%)
Query: 261 AFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDR-----REKTDPETGVVLEDTSLRSNS 315
AF C +T VM DPV+L G T ER AIE W R + P T L T + ++
Sbjct: 26 AFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASI 85
Query: 316 PLRQSIEEWKELNYCLNIRCCRAKLLSG-IDSSELEALDQMQDLMRESSINKDWISIGGI 374
LR +IEEW+ N + R L G ++ L+AL ++ + R N+ + +
Sbjct: 86 ALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALMHVRQICRTIRSNRHGVRNSQL 145
Query: 375 TDIIISILGSSHNKDVKMKILITLKQLVKGHARNKEKVIDYGGWDHIVPCLGRDPSISL- 433
+II +L S+ ++ V+ K L TL+ +V+G +K V + +V L +PS
Sbjct: 146 IHMIIDMLKSTSHR-VRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVKFLSHEPSKGRE 204
Query: 434 AAVKLLYELMQDRSGWNVAVCRKLSQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVD 493
AAV LL+EL + A+C K+ ++ LV L E+ EK + L +++
Sbjct: 205 AAVSLLFELSKSE-----ALCEKIGSIHGALILLVGLTSSN-SENVSIVEKADRTLENME 258
Query: 494 --EENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLL 551
EE + A G +PL+ ++++G+ +++ M L + L ++++++L + + L+
Sbjct: 259 RSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPL-NNDVKVLVAQTVGSSLV 317
Query: 552 GLVGSGNFQSKELSLSVLVKLSGCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEI 611
L+ SG+ +E +L L K+S + +++ + G +P +++ +F P+N+ ++ E+
Sbjct: 318 DLMRSGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDLFYVG-PNNLPIRLKEV 376
Query: 612 LEKLSSDGIKFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAEL 671
+ ++ + D L E V NLL L N + + + C
Sbjct: 377 SATILANIVNIGYDFDKATLVSENRVENLLHLISNTGPAIQCKLLEVLVGLTSCPKTVPK 436
Query: 672 VKIAVVKANG--VSLILSLLDDTDSEVREIAINLLFLFSHHEPEGVVEYLL-KPKRLEAL 728
V + +K +G +SL+ + + ++R +I LL S E + + L +L +L
Sbjct: 437 V-VYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKALCGTAGQLGSL 495
Query: 729 VGFL-ENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINI---LKSGTMEAK- 783
V + E + Q AAAGLLA LP +L LT +++E+ II+ ++ G ++
Sbjct: 496 VAIISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVFGIRQGDIKGMR 555
Query: 784 ------ENALSALFRFTDPTNLEAQ--RNVVERGVYPLLVNLLQI-GSITAKARAAALIG 834
E + L R T N EA+ E V L ++LLQ G + +A +
Sbjct: 556 FVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQDNIQMVSAMALE 615
Query: 835 TLSTSSPKFTDMPESAG---CW----CFRPSRA--HLCQVHGGICSESTSFCLLKANALP 885
LS S K T MP+ C C R LC++H GICS +FCL++ A+
Sbjct: 616 NLSLESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRETFCLVEGGAVE 675
Query: 886 HLVKLLQGRVHATAYEAIQTLSTLVQEGCQ-QRGVNVLHQEEAIKPTLEILTWG-TDSLK 943
LV LL A+ LS+L+++G ++GV +L + + I+ L +L T+ L
Sbjct: 676 KLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVLRENRTERLT 735
Query: 944 EEALGFLEKVF----MSKEMVDTYGSSARLL 970
A+ +E++ +++E+ + SA L+
Sbjct: 736 RRAVWMVERILRIEDIAREVAEEQSLSAALV 766
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 138/602 (22%), Positives = 247/602 (41%), Gaps = 86/602 (14%)
Query: 148 SQSQIVDKLNQGLRDQKLDQGFANDMLEEIARAVGVPVEPSEISKELASFRREKEEAANR 207
++ +I ++Q L+DQK G +++L +IA + G+ EI E KE+A
Sbjct: 145 ARDEISYTIDQALKDQKKGVGPTSEVLVKIAESTGLRSN-QEILVEGVVLTNMKEDAELT 203
Query: 208 KERAEVLFLDQVIELLSRADAARDYEEVKKQYFQRLQIIERYDSRENYIQPLNAFKCRIT 267
E +LD +I L + Q + L I++ R P + F+C ++
Sbjct: 204 DNDTEAEYLDGLISLTT-------------QMHEYLSDIKQAQLRCPVRVPSD-FRCSLS 249
Query: 268 GTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSIEEWKEL 327
+M DPV + +G T ER I+ W+D P+T L T+L N +R + W E
Sbjct: 250 LELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVRAFLASWCET 309
Query: 328 N----------------YCLNIRCCRAKLLSGIDSSELEALDQMQDLMRESSINKDWISI 371
N + L + RA S L+A + Q R +S +
Sbjct: 310 NNVYPPDPLELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQVFSRSAS------AP 363
Query: 372 GGITDIIISILGSSHNKDVKMKILITLKQLVKGHARNKEKVIDYGGWDH--IVPC----L 425
G +++++ + N + +T + K + W H I+P
Sbjct: 364 GIVSEVVCK---TKRNNNAAADRSLT-------RSNTPWKFPEERHWRHPGIIPATVRET 413
Query: 426 GRDPSISLAAVKLLYELMQ---DRSGWNVAVCRKLSQ----------QCSGILFLVTLIK 472
G SI KL+ +L D A R L++ +C I LV+L+
Sbjct: 414 GSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLY 473
Query: 473 GP-VRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGA-ESSRILMMKALLS 530
R A+ +L +++ N A+SG PLI + G E ++ L S
Sbjct: 474 STDERIQADAVTCLLN--LSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFS 531
Query: 531 MELVDSNLELLGKEGIIPPLLGLVGSGNFQSKELSLSVLVKLSGCSKNRELISAAGGIPQ 590
+ +++ +G+ G I PL+ L+GSG+ K+ + + L LS +N+ + AG +
Sbjct: 532 LSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRY 591
Query: 591 VLELMFSSHVPSNIIVKCSEILEKLSS--DGIKFLVDEKGNRLELEPIVTNLLTLQQNFN 648
++ELM + ++ K +L L++ +G K + E+G P++ ++ L
Sbjct: 592 LVELMDPAF---GMVEKAVVVLANLATVREG-KIAIGEEGGI----PVLVEVVEL----- 638
Query: 649 SSYNVRKPALRALFRICKSEAELVKIAVVKANGVSLILSLLDDTDSEVREIAINLLFLFS 708
S ++ A AL ++C + V++ + +++L + +E A NLL F
Sbjct: 639 GSARGKENATAALLQLCTHSPKFCN-NVIREGVIPPLVALTKSGTARGKEKAQNLLKYFK 697
Query: 709 HH 710
H
Sbjct: 698 AH 699
Score = 40.4 bits (93), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 33/280 (11%)
Query: 562 KELSLSVLVKLSGCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLS-SDGI 620
+E + + + + NR +I+ IP ++ L++S+ I L LS +D
Sbjct: 439 REATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTD--ERIQADAVTCLLNLSINDNN 496
Query: 621 KFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKAN 680
K L+ E G + L ++ + NS+ LF + S E K + +A
Sbjct: 497 KSLIAESGAIVPLIHVLKTGYLEEAKANSAAT--------LFSL--SVIEEYKTEIGEAG 546
Query: 681 GVSLILSLLDDTDSEVREIAINLLFLFS-HHEPE------GVVEYLLKPKRLEALVGFLE 733
+ ++ LL ++ A LF S HHE + G V YL++ ++ G +E
Sbjct: 547 AIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVE--LMDPAFGMVE 604
Query: 734 NDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRF 793
A +LANL + + E G+ ++ +++ G+ KENA +AL +
Sbjct: 605 K---------AVVVLANLATVREG-KIAIGEEGGIPVLVEVVELGSARGKENATAALLQL 654
Query: 794 TDPTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAAALI 833
+ + NV+ GV P LV L + G+ K +A L+
Sbjct: 655 CTHSP-KFCNNVIREGVIPPLVALTKSGTARGKEKAQNLL 693
Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 98/236 (41%), Gaps = 42/236 (17%)
Query: 648 NSSYNVRKPALRALFRICKSEAELVKIAVVKANGVSLILSLLDDTDSEVREIAINLLFLF 707
+SS + ++ A A RI + +I + + + ++SLL TD ++ A+ L
Sbjct: 432 SSSLDTQREAT-ARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNL 490
Query: 708 SHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDG 767
S ++ + + + + L+ L+ + + +A L +L E ++ E
Sbjct: 491 SINDNNKSL--IAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIE-EYKTEIGEAGA 547
Query: 768 LNAIINILKSGTMEAKENALSALFRFT----------------------DPTNLEAQRNV 805
+ ++++L SG++ K++A +ALF + DP ++ V
Sbjct: 548 IEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEKAV 607
Query: 806 V----------------ERGVYPLLVNLLQIGSITAKARAAALIGTLSTSSPKFTD 845
V E G P+LV ++++GS K A A + L T SPKF +
Sbjct: 608 VVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFCN 663
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 136/294 (46%), Gaps = 23/294 (7%)
Query: 69 ESLEADVEKANNLVEKYKNK-SRFYLLVKCRYIVNEIQEVTRNIGRSLASLSLANTEVLS 127
E L++ V +A +E + K S+ + + +C ++ ++Q + I R L LS + S
Sbjct: 67 EDLDSVVNQAREFLEDWSPKLSKLFGVFQCEVLLGKVQTCSLEISRILLQLSQS-----S 121
Query: 128 EISDQMNRLQNEMQRVEFKASQSQIVDKLNQGLRDQKLD-QGFANDMLEEIARAVGVPVE 186
++ + ++ +Q E + +++ + LR+QK D N+ LE I + +G+ +
Sbjct: 122 PVTSSVQSVERCVQETESFKQEGTLMELMENALRNQKDDITSLDNNHLESIIQMLGL-IS 180
Query: 187 PSEISKELASFRREKEEAANRKERAEVLFLDQVIELLSRADAARDYEEVKKQYFQRLQII 246
++ KE + +E+ + K ++ +Q+IEL+ R++ +K ++ + + I
Sbjct: 181 NQDLLKESITVEKERIRSQASKSEEDMEQTEQLIELVL---CIREHM-LKTEFLEVAKGI 236
Query: 247 ERYDSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVL 306
I P F+C ++ +M+DPV + +G T +R +I+ WLD P T VL
Sbjct: 237 S--------IPPY--FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVL 286
Query: 307 EDTSLRSNSPLRQSIEEWKELNYCLNIRCCRAKLLSGIDSSELEALDQMQDLMR 360
L N ++ I W E N +N+ G D+S + QD R
Sbjct: 287 THQELIPNYTVKAMIASWLEANR-INLATNSCHQYDGGDASSMANNMGSQDFNR 339
Score = 40.4 bits (93), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 45/247 (18%)
Query: 637 VTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVSLILSLLDDTDSEV 696
++ + L ++ S N K A A R + ++ + + ++ +LSLL +
Sbjct: 471 TSHTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLT 530
Query: 697 REIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSEL 756
+E A+ L S E + +++ +E LV L + +AA L + S L
Sbjct: 531 QEHAVTALLNLSISELNKAM--IVEVGAIEPLVHVLNTGNDRAKENSAASLFS---LSVL 585
Query: 757 SLTMKLIELD--GLNAIINILKSGTMEAKENALSALFRFT-------------------- 794
+ + I + A++N+L GT K++A SALF +
Sbjct: 586 QVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVE 645
Query: 795 --DP------------TNL----EAQRNVVERGVYPLLVNLLQIGSITAKARAAALIGTL 836
DP NL E ++ +V G PLLV + +GS K AA+++ L
Sbjct: 646 LLDPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQL 705
Query: 837 STSSPKF 843
+SPKF
Sbjct: 706 CLNSPKF 712
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Query: 460 QCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAES 519
+C I L++L+ + + E A L L + E N + G +PL+ + G +
Sbjct: 512 RCGAITPLLSLLYSEEKLTQEHAVTALLNL-SISELNKAMIVEVGAIEPLVHVLNTGNDR 570
Query: 520 SRILMMKALLSMELVDSNLELLGK-EGIIPPLLGLVGSGNFQSKELSLSVLVKLSGCSKN 578
++ +L S+ ++ N E +G+ I L+ L+G G F+ K+ + S L LS N
Sbjct: 571 AKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDN 630
Query: 579 RELISAAGGIPQVLELM 595
+ I A + ++EL+
Sbjct: 631 KARIVQAKAVKYLVELL 647
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%)
Query: 495 ENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLV 554
EN + G PL+ + + ++ + ALL++ + + N ++ + G I PL+ ++
Sbjct: 505 ENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVL 564
Query: 555 GSGNFQSKELSLSVLVKLSGCSKNRELISAAGGIPQVL 592
+GN ++KE S + L LS NRE I + Q L
Sbjct: 565 NTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQAL 602
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 116/554 (20%), Positives = 227/554 (40%), Gaps = 73/554 (13%)
Query: 78 ANNLVEKYKNKSRFYLLVKCRYIVNEIQEVTRNIGRSLASLSLANTEVLSEISDQMNRLQ 137
A +L+ K ++ S+ ++ ++E V R I +L +L + E+ +Q+ +
Sbjct: 59 ARDLLRKTRDGSKIDQAMRGDAFLDEFAGVNRQIHLALDALPYNTFHMPQEVQEQVALVH 118
Query: 138 NEMQRVEFKASQSQIVDKLNQGLRDQKLDQGFANDMLEEIARAVGVPVEPSEISKELASF 197
++ QR + D +L A + + P +P+ +++ S
Sbjct: 119 SQFQRASTRTDPP-----------DTQLSMDLAWALTDN-------PSDPALLTR--ISH 158
Query: 198 RREKEEAANRKERAEVLFLDQVIELLSRADAARDYEEVKKQYFQRLQIIERY-----DSR 252
+ + A+ K + L + VI D D + + + E + +R
Sbjct: 159 KLQLHTMADMKNESIALH-NMVISTAGEPDGCVDQMSSLLKKLKDCVVTEDHANDALTTR 217
Query: 253 ENYIQ---PL--NAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLE 307
I+ P+ + F+C I+ +M DPV + +G T ER+ I+ WLD KT P+T L
Sbjct: 218 SASIKHRSPIIPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLS 277
Query: 308 DTSLRSNSPLRQSIEEWKELNYC------LNIRCCRA----------------KLLSGID 345
TSL N L+ I +W E N N R +A +L SG
Sbjct: 278 HTSLTPNFVLKSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQ 337
Query: 346 SSELEALDQMQDLMRESSINKDWISIGGITDIIISILGSSHNKDVKMKILITLKQLVKGH 405
+ A +++ L + + N+ I+ G +++++L SS + + + L + H
Sbjct: 338 DEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSI--H 395
Query: 406 ARNKEKVIDYGGWDHIVPCL--GRDPSISLAAVKLLYELMQDRSGWNVAVCRKLSQQCSG 463
NK ++D IV L G + AA L + D + +
Sbjct: 396 ENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGA-------AGA 448
Query: 464 ILFLVTLI-KGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSRI 522
I L+ L+ G R + A I + + N RA K+G L++ ++ + +
Sbjct: 449 IPPLINLLCDGSPRGKKDAATAIFN--LCIYQGNKVRAVKAGIVIHLMNFLV---DPTGG 503
Query: 523 LMMKALLSMELVDSNLE---LLGKEGIIPPLLGLVGSGNFQSKELSLSVLVKLSGCSKNR 579
++ +AL + ++ N E ++ + IPPL+ ++ +G+ +++E + ++L L +
Sbjct: 504 MIDEALSLLSILAGNPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQ 563
Query: 580 ELISAAGGIPQVLE 593
L + A G+ L+
Sbjct: 564 TLAAKAAGVEDALK 577
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 120/282 (42%), Gaps = 31/282 (10%)
Query: 739 DVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTN 798
D Q AAAG + L K ++ + + E + ++N+L S +E+A++AL + N
Sbjct: 338 DEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHEN 397
Query: 799 LEAQRNVVERGVYPLLVNLLQIGSITAKARAAALIGTLS-TSSPKFT-----DMPESAGC 852
+A ++V+ P +V +L+ GS+ + AAA + +LS K T +P
Sbjct: 398 NKA--SIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINL 455
Query: 853 WCFRPSRA---------HLCQVHGGICSESTSFCLLKANALPHLVKLLQGRVHATAYEAI 903
C R +LC G +KA + HL+ L EA+
Sbjct: 456 LCDGSPRGKKDAATAIFNLCIYQG------NKVRAVKAGIVIHLMNFLVDPTGGMIDEAL 509
Query: 904 QTLSTLVQEGCQQRGVNVLHQEEAIKPTLEILTWGTDSLKEEALGFLEKVFMSKEMVDTY 963
LS L G V+ + E I P +E++ G+ +E A L + S + T
Sbjct: 510 SLLSILAG---NPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILW-LLCSADTEQTL 565
Query: 964 GSSARLLLVPLTSRNVHEDGS--LERKAAKVLSLIERYSRSS 1003
+ A + L + + E G+ +RKA+ +L L+ + + S
Sbjct: 566 AAKAAGVEDAL--KELSETGTDRAKRKASSILELMHQANEDS 605
Score = 36.6 bits (83), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 42/71 (59%)
Query: 525 MKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQSKELSLSVLVKLSGCSKNRELISA 584
+ ALL++ + ++N + IP ++ ++ +G+ +++E + + L LS +N+ I A
Sbjct: 386 VTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGA 445
Query: 585 AGGIPQVLELM 595
AG IP ++ L+
Sbjct: 446 AGAIPPLINLL 456
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 23/263 (8%)
Query: 67 ALESLEADVEKANNLVEKYKN-KSRFYLLVKCRYIVNEIQEVTRNIGRSLASLSLANTEV 125
A E L DV+++ +L ++ S+ Y +++ ++ ++++ + + L S +
Sbjct: 60 AFEELTQDVDQSIDLFRSWQAFSSKVYFVLQIESLLPKMRDTIVDTFQFLMSSKNHLPDE 119
Query: 126 LSEISDQMNRLQNEMQRVEFKASQSQIVDKLNQGLRDQKLDQGFANDMLEEIARAVGVPV 185
LS S L+ +++++ S +I ++ LRDQ+ G + ++L +I G+
Sbjct: 120 LSPAS-----LEQCLEKIKH-LSYEEISSVIDGALRDQRDGVGPSPEILVKIGENTGLRS 173
Query: 186 EPSEISKELASFRREKEEAANRKERAEVLFLDQVIELLSRADAARDYEEVKKQYFQRLQI 245
EI E + R+KE A + AEV FLDQ+I +++R +RL +
Sbjct: 174 N-QEILIEAVALERQKEMAEQSENNAEVEFLDQLIVIVNR-------------MHERLLL 219
Query: 246 IERYDSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVV 305
I++ ++ + + L F C ++ VM DPV + +G T E+A I+ W+D K P+T
Sbjct: 220 IKQ--TQTSSVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQT 277
Query: 306 LEDTSLRSNSPLRQSIEEWKELN 328
L T+L N ++ I W E N
Sbjct: 278 LTHTTLIPNYTVKALIANWCETN 300
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 463 GILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSRI 522
I+ LV L+ + E A L L +++ N A +G +PLI + G+ ++
Sbjct: 584 AIVLLVELLYSTDSATQENAVTALLNL-SINDNNKKAIADAGAIEPLIHVLENGSSEAKE 642
Query: 523 LMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQSKELSLSVLVKLSGCSKNRELI 582
L S+ +++ N +G+ G I PL+ L+G+G + K+ + + L LS +N+ +I
Sbjct: 643 NSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMI 702
Query: 583 SAAGGIPQVLELM 595
+G + +++LM
Sbjct: 703 VQSGAVRYLIDLM 715
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 50/216 (23%)
Query: 673 KIAVVKANGVSLILSLLDDTDSEVREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFL 732
+I + + + L++ LL TDS +E A+ L S ++ + + +E L+ L
Sbjct: 576 RIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNK--KAIADAGAIEPLIHVL 633
Query: 733 ENDAKHDVQMAAAGLLANLPKSELSL----TMKLIELDGLNAIINILKSGTMEAKENALS 788
EN + + +AA L + LS+ +K+ + + ++++L +GT K++A +
Sbjct: 634 ENGSSEAKENSAATLFS------LSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAAT 687
Query: 789 ALFRFT----------------------DPT------------NL----EAQRNVVERGV 810
ALF + DP NL E + + + G
Sbjct: 688 ALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPEGRNAIGQEGG 747
Query: 811 YPLLVNLLQIGSITAKARAAALIGTLSTSSPKFTDM 846
PLLV ++++GS K AAA + LST+S +F +M
Sbjct: 748 IPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNM 783
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 117/264 (44%), Gaps = 34/264 (12%)
Query: 578 NRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSSDGIKFLVDEKGNRLELEPIV 637
NR +I +G I ++EL++S+ + + + ++ + K + D +EP++
Sbjct: 575 NRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGA----IEPLI 630
Query: 638 TNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVSLILSLLDDTDSEVR 697
L N S ++ + LF + E +KI ++ + ++ LL + +
Sbjct: 631 HVLE------NGSSEAKENSAATLFSLSVIEENKIKIG--QSGAIGPLVDLLGNGTPRGK 682
Query: 698 EIAINLLFLFSHHEPE-------GVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLAN 750
+ A LF S H+ G V YL+ ++ G + D +A LA
Sbjct: 683 KDAATALFNLSIHQENKAMIVQSGAVRYLID--LMDPAAGMV------DKAVAVLANLAT 734
Query: 751 LPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVV-ERG 809
+P+ ++ + G+ ++ +++ G+ KENA +AL + + TN N+V + G
Sbjct: 735 IPEGRNAIGQE----GGIPLLVEVVELGSARGKENAAAALLQLS--TNSGRFCNMVLQEG 788
Query: 810 VYPLLVNLLQIGSITAKARAAALI 833
P LV L Q G+ A+ +A AL+
Sbjct: 789 AVPPLVALSQSGTPRAREKAQALL 812
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 109/518 (21%), Positives = 215/518 (41%), Gaps = 47/518 (9%)
Query: 89 SRFYLLVKCRYIVNEIQEVTRNIGRSLASLSLANTEVLSEISDQMNRLQNEMQRVEFKA- 147
S+ YL+++ + +++ EV+ + +SL+ + ++ E+ +Q+ + ++ +R + +
Sbjct: 86 SKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVREQVELVLSQFRRAKGRVD 145
Query: 148 -SQSQIVDKLNQGLRDQKLDQGFANDMLEEIARAVGVPVEPSEISKELASFRREKEEAAN 206
S ++ + L Q L ++ D +LE +A+ + + P + +A +
Sbjct: 146 VSDDELYEDL-QSLCNKSSDVDAYQPVLERVAKKLHLMEIPDLAQESVALHEMVASSGGD 204
Query: 207 RKERAE--VLFLDQVIELLSRADAARDYEEVKKQYFQRLQIIERYDSRENYIQPLNAFKC 264
E E + L + + + D + ++V Q + I + F+C
Sbjct: 205 VGENIEEMAMVLKMIKDFVQTEDDNGEEQKVGVNSRSNGQTSTAASQKIPVIP--DDFRC 262
Query: 265 RITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSIEEW 324
I+ +M DPV + +G T ER IE W++ T P+T L T+L N LR I +W
Sbjct: 263 PISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSLIAQW 322
Query: 325 KELNYCLNIR---CCRAKLLSGIDSSELEALDQMQDLMRESSINKDWISIGGITDIIISI 381
E N + R + +S SS EA ++++DLM W G
Sbjct: 323 CEANDIEPPKPPSSLRPRKVSSF-SSPAEA-NKIEDLM--------WRLAYG-------- 364
Query: 382 LGSSHNKDVKMKILITLKQLVKGHARNKEKVIDYGGWDHIVPCLGR-DPSISLAAVKLLY 440
N + + ++ L K +A N+ + + G +V L D I +V L
Sbjct: 365 -----NPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALL 419
Query: 441 ELMQDRSGWNVAVC---RKLSQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENF 497
N+++C + I +V ++K E+ E A L L +D EN
Sbjct: 420 ---------NLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVID-ENK 469
Query: 498 CRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSG 557
G PL+ + +G + + AL ++ + N + G+IP L L+
Sbjct: 470 VTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEP 529
Query: 558 NFQSKELSLSVLVKLSGCSKNRELISAAGGIPQVLELM 595
+ +L++L LS + + +I ++ +P ++E +
Sbjct: 530 GSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFI 567
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 23/258 (8%)
Query: 541 LGKEGIIPPLLGLVGSGNFQSKELSLSVLVKLSGCSKNRELISAAGGIPQVLELMFSSHV 600
+ + G IP L+GL+ + + + +E S++ L+ LS C N+ I +AG IP +++++ +
Sbjct: 390 IAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSM 449
Query: 601 PSNIIVKCSEILEKLSSDGIKFLVDEK----GNRLELEPIVTNLLTLQQNFNSSYNVRKP 656
+ + L LS ++DE G + P+V L + +K
Sbjct: 450 EAR--ENAAATLFSLS------VIDENKVTIGALGAIPPLVVLL------NEGTQRGKKD 495
Query: 657 ALRALFRICKSEAELVKIAVVKANGVSLILSLLDDTDSEVREIAINLLFLFSHHEPEGVV 716
A ALF +C + K ++A + + LL + S + + A+ +L + S H PEG
Sbjct: 496 AATALFNLCIYQGN--KGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSH-PEGKA 552
Query: 717 EYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILK 776
+ + +LV F+ + + + AAA +L +L + ++ +L + +I++
Sbjct: 553 -IIGSSDAVPSLVEFIRTGSPRNRENAAA-VLVHLCSGDPQHLVEAQKLGLMGPLIDLAG 610
Query: 777 SGTMEAKENALSALFRFT 794
+GT K A L R +
Sbjct: 611 NGTDRGKRKAAQLLERIS 628
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 120/574 (20%), Positives = 221/574 (38%), Gaps = 75/574 (13%)
Query: 38 VLSKHLFDIESVLKELQLQKLNDSQAVRLALESLEADVEKANNLVEKYKNKSRFYLLVKC 97
+LS ++ V EL+ ++ +A+R+AL+S + L S+ + L
Sbjct: 46 LLSPFFEELIDVNVELKKDQITGFEAMRIALDS-------SLELFRSVNGGSKLFQLFDR 98
Query: 98 RYIVNEIQEVTRNIGRSLASLSLANTEVLSEISDQMNRLQNEMQRVEFKASQSQIVDKLN 157
+V + +++T I +L+ + EV E+ +Q+ L + +R + + +S + +
Sbjct: 99 DSLVEKFRDMTVEIEAALSQIPYEKIEVSEEVREQVQLLHFQFKRAKERWEESDLQLSHD 158
Query: 158 QGLRD----------QKLDQGFANDMLEEIARAVGVPVEPSEISKELASFRREKEEAANR 207
+ + ++L Q ++E+ + E I + S+ + ++ R
Sbjct: 159 LAMAENVMDPDPIILKRLSQELQLTTIDELKK------ESHAIHEYFLSYDGDPDDCFER 212
Query: 208 KERAEVLFLDQVIELLSRADAARDYEEVKKQYFQRLQIIERYDSRENYIQPLNAFKCRIT 267
+D V S D + V + R +I Y F+C I+
Sbjct: 213 MSSLLKNLVDFVTMESSDPDPSTGSRIVSRH---RSPVIPEY------------FRCPIS 257
Query: 268 GTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSIEEWKEL 327
+M DPV + TG T ER++I+ WLD KT P++ L L N L+ I W E
Sbjct: 258 LELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCES 317
Query: 328 N---YCLNIRCCRAKLLSGIDSSELEALDQMQDLMRESSINKDWISIGGITDIIISILGS 384
N N CR + G SS+ + ++S+L
Sbjct: 318 NGIELPQNQGSCRTTKIGGSSSSDCD------------------------RTFVLSLLEK 353
Query: 385 SHNKDVKMKILIT--LKQLVKGHARNKEKVIDYGGWDHIVPCLGR-DPSISLAAVKLLYE 441
N + + L+ L K + N+ + + G +V L DP +V L
Sbjct: 354 LANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLN 413
Query: 442 LMQDRSGWNVAVCRKLSQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAA 501
L + V I +V ++K E+ E A L L +D EN
Sbjct: 414 LSINEGNKGAIV------DAGAITDIVEVLKNGSMEARENAAATLFSLSVID-ENKVAIG 466
Query: 502 KSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQS 561
+G + LI + +G + A+ ++ + N K GI+ PL L+
Sbjct: 467 AAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGM 526
Query: 562 KELSLSVLVKLSGCSKNRELISAAGGIPQVLELM 595
+ +L++L LS + + I+ A IP ++E++
Sbjct: 527 VDEALAILAILSTNQEGKTAIAEAESIPVLVEII 560
Score = 40.4 bits (93), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 58/257 (22%)
Query: 762 LIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIG 821
+++ + I+ +LK+G+MEA+ENA + LF + E + + G L++LL+ G
Sbjct: 424 IVDAGAITDIVEVLKNGSMEARENAAATLFSLS--VIDENKVAIGAAGAIQALISLLEEG 481
Query: 822 SITAKARAAALIGTLSTSSPKFTDMPESAGCWCFRPSRAHLCQVHGGICSESTSFCLLKA 881
+ K AA I L + SRA V GGI
Sbjct: 482 TRRGKKDAATAIFNLCI--------------YQGNKSRA----VKGGI------------ 511
Query: 882 NALPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRGVNVLHQEEAIKPTLEILTWGTDS 941
+ L +LL+ EA+ L+ L Q G + + E+I +EI+ G+
Sbjct: 512 --VDPLTRLLKDAGGGMVDEALAILAIL---STNQEGKTAIAEAESIPVLVEIIRTGSPR 566
Query: 942 LKEEA--------LGFLEKVFMSKEMVDTYGSSARLLLVPLTSRNVHEDGS--LERKAAK 991
+E A +G +E++ +++E+ A + L LT E+G+ +RKAA
Sbjct: 567 NRENAAAILWYLCIGNIERLNVAREV------GADVALKELT-----ENGTDRAKRKAAS 615
Query: 992 VLSLIERYSRSSTSLIP 1008
+L LI++ + + +P
Sbjct: 616 LLELIQQTEGVAVTTVP 632
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 128/258 (49%), Gaps = 28/258 (10%)
Query: 540 LLGKEGIIPPLLGLVGSGNFQSKELSLSVLVKLSGCSKNRELISAAGGIPQVLELMFSSH 599
L+ + G IP L+ L+ S + ++E +++ ++ LS N+ELI AG + +++++ +
Sbjct: 368 LIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGT 427
Query: 600 VPSNIIVKCSEILEKLS-SDGIKFLVDEKGNRLELEPIVTNLLTLQQNFNSSYNVRKPAL 658
+ + + L LS +D K ++ G P + +LL N + +K A
Sbjct: 428 MEAR--ENAAATLFSLSLADENKIIIGGSG----AIPALVDLLE-----NGTPRGKKDAA 476
Query: 659 RALFRIC---KSEAELVKIAVVKANGVSLILSLLDDTDSEVREIAINLLFLFSHHEPEGV 715
ALF +C ++ V+ +V A L+ L D T + + A+ +L + ++++
Sbjct: 477 TALFNLCIYHGNKGRAVRAGIVTA----LVKMLSDSTRHRMVDEALTILSVLANNQ--DA 530
Query: 716 VEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINIL 775
++K L AL+G L+ D + + AAA LL+ L K + T KLI + L A++ ++
Sbjct: 531 KSAIVKANTLPALIGILQTDQTRNRENAAAILLS-LCKRD---TEKLITIGRLGAVVPLM 586
Query: 776 ---KSGTMEAKENALSAL 790
K+GT K A+S L
Sbjct: 587 DLSKNGTERGKRKAISLL 604
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 154/359 (42%), Gaps = 42/359 (11%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F C ++ +M DPV + TG T ERA I+ W+D T P+T LE+ +L N LR I
Sbjct: 245 FLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLI 304
Query: 322 EEW-----------------KELNYCLNIRCCRAKLLSGIDSSELEALDQMQDLMRESSI 364
W K IR +L S A+ +++ L + S+
Sbjct: 305 SRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTD 364
Query: 365 NKDWISIGGITDIIISILGSSHNKDVKMKILITLKQLVKGHARNKEKVIDYGGWDHIVPC 424
N+ I+ G +++++L S + I L + + NKE ++ G IV
Sbjct: 365 NRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSI--YENNKELIMFAGAVTSIVQV 422
Query: 425 L--GRDPSISLAAVKLLYELMQDRSGWNVAVCRKLSQQCSG-ILFLVTLIK-GPVRESAE 480
L G + AA L + D + K+ SG I LV L++ G R +
Sbjct: 423 LRAGTMEARENAAATLFSLSLADEN--------KIIIGGSGAIPALVDLLENGTPRGKKD 474
Query: 481 CAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLE- 539
A + + N RA ++G L+ + ++S+R M+ L++ V +N +
Sbjct: 475 AATALFN--LCIYHGNKGRAVRAGIVTALVKML---SDSTRHRMVDEALTILSVLANNQD 529
Query: 540 ---LLGKEGIIPPLLGLVGSGNFQSKELSLSVLVKLSGCSKNRELISAAGGIPQVLELM 595
+ K +P L+G++ + +++E + ++L+ L C ++ E + G + V+ LM
Sbjct: 530 AKSAIVKANTLPALIGILQTDQTRNRENAAAILLSL--CKRDTEKLITIGRLGAVVPLM 586
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 40/208 (19%)
Query: 767 GLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVV--ERGVYPLLVNLLQIGSIT 824
+ +I+ +L++GTMEA+ENA + LF + L + ++ G P LV+LL+ G+
Sbjct: 415 AVTSIVQVLRAGTMEARENAAATLFSLS----LADENKIIIGGSGAIPALVDLLENGTPR 470
Query: 825 AKARAAALIGTLSTSSPKFTDMPESAGCWCFRPSRAHLCQVHGGICSESTSF-------- 876
K AA + L R RA + + S+ST
Sbjct: 471 GKKDAATALFNLCIYHGNKG-----------RAVRAGIVTALVKMLSDSTRHRMVDEALT 519
Query: 877 -------------CLLKANALPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRGVNVLH 923
++KAN LP L+ +LQ A L +L + ++ + +
Sbjct: 520 ILSVLANNQDAKSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEK--LITIG 577
Query: 924 QEEAIKPTLEILTWGTDSLKEEALGFLE 951
+ A+ P +++ GT+ K +A+ LE
Sbjct: 578 RLGAVVPLMDLSKNGTERGKRKAISLLE 605
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 162/368 (44%), Gaps = 51/368 (13%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F C I+ +M DP + TG T ER+ I+ W+D + P+T LE+ +L N LR I
Sbjct: 247 FLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRSLI 306
Query: 322 EEW------------------------KELNYCLN-IRCCRAKLLSGIDSSELEALDQMQ 356
+W ++L+ ++ IR KL S A+ +++
Sbjct: 307 SQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAVSEIR 366
Query: 357 DLMRESSINKDWISIGGITDIIISILGSSHNKDVKMKILITLKQLVKGHARNKEKVIDYG 416
L + S+ N+ I+ G +++ +L S + + + + + L + NKE ++ G
Sbjct: 367 SLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNL-SIYEHNKELIMLAG 425
Query: 417 GWDHIVPCL--GRDPSISLAAVKLLYELMQDRSGWNVAVCRKLSQQCSG-ILFLVTLIK- 472
IV L G + AA L + D + K+ SG I+ LV L++
Sbjct: 426 AVTSIVLVLRAGSMEARENAAATLFSLSLADEN--------KIIIGASGAIMALVDLLQY 477
Query: 473 GPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSRILMMKALLSME 532
G VR + A + + + N RA ++G KPL+ + SS + +AL +
Sbjct: 478 GSVRGKKDAATALFN--LCIYQGNKGRAVRAGIVKPLVKMLTDS--SSERMADEALTILS 533
Query: 533 LVDSNLELLGKEGI-----IPPLLGLVGSGNFQSKELSLSVLVKLSGCSKNRELISAAGG 587
++ SN + K I IPPL+ + +++E + ++L+ L C ++ E + + G
Sbjct: 534 VLASN--QVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCL--CKRDTEKLISIGR 589
Query: 588 IPQVLELM 595
+ V+ LM
Sbjct: 590 LGAVVPLM 597
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 118/286 (41%), Gaps = 52/286 (18%)
Query: 728 LVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDG-LNAIINILKSGTMEAKENA 786
LV L +D + Q A + NL E + +LI L G + +I+ +L++G+MEA+ENA
Sbjct: 388 LVKLLTSDGDTETQENAVTCILNLSIYEHN--KELIMLAGAVTSIVLVLRAGSMEARENA 445
Query: 787 LSALFRFTDPTNLEAQRNVV--ERGVYPLLVNLLQIGSITAKARAAALIGTLSTSSPKFT 844
+ LF + L + ++ G LV+LLQ GS+ K AA +
Sbjct: 446 AATLFSLS----LADENKIIIGASGAIMALVDLLQYGSVRGKKDAATAL----------- 490
Query: 845 DMPESAGCWCFRPSRAHLCQVHGGICSESTSFCLLKANALPHLVKLL-QGRVHATAYEAI 903
+LC G ++A + LVK+L A EA+
Sbjct: 491 ---------------FNLCIYQGNKGRA------VRAGIVKPLVKMLTDSSSERMADEAL 529
Query: 904 QTLSTLVQEGCQQRGVNVLHQEEAIKPTLEILTWGTDSLKEEALGFLEKVFMSKEMVDTY 963
LS L Q + + AI P ++ L +E A L + + K +
Sbjct: 530 TILSVLAS---NQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAIL--LCLCKRDTEKL 584
Query: 964 GSSARL-LLVPLTSRNVHEDGS--LERKAAKVLSLIERYSRSSTSL 1006
S RL +VPL + DG+ +RKA +L L+ + SR SL
Sbjct: 585 ISIGRLGAVVPLM--ELSRDGTERAKRKANSLLELLRKSSRKLGSL 628
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 35/289 (12%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F C IT +M+DPV + TG T E+ +I+ W D KT P+T L+ SL N L+ I
Sbjct: 294 FLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLI 353
Query: 322 EEWKELNYCLNIRCCRAKLLSGIDSSELEALDQMQDLMRESSINKDWISIGGITDIIISI 381
+W E N N + I E+ Q + KD +S+ ++
Sbjct: 354 MQWCEKN---NFK---------IPEKEVSPDSQNE--------QKDEVSL------LVEA 387
Query: 382 LGSSHNKDVKMKILITLKQLVKGHARNKEKVIDYGGWDHIVPCLGR-DPSISLAAVKLLY 440
L SS ++ + + ++ L + + N+ + + G +V L D I AV L
Sbjct: 388 LSSSQLEEQRRSVK-QMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLL 446
Query: 441 ELMQDRSGWNVAVCRKLSQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRA 500
L D V +KL I ++ +++ RE+ E + L L +DE N
Sbjct: 447 NLSIDE------VNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDE-NKVTI 499
Query: 501 AKSGWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPP 549
S PL+D + G + + AL ++ L +N GI+ P
Sbjct: 500 GLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQP 548
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 43/69 (62%)
Query: 527 ALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQSKELSLSVLVKLSGCSKNRELISAAG 586
LL++ + + N +L+ EG IP ++ ++ +GN +++E S + L LS +N+ I +
Sbjct: 444 TLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSN 503
Query: 587 GIPQVLELM 595
GIP +++L+
Sbjct: 504 GIPPLVDLL 512
Score = 41.2 bits (95), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 1/132 (0%)
Query: 455 RKLSQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRII 514
R L I LV L+ P E A L L +DE N + G +I+ +
Sbjct: 414 RVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNL-SIDEVNKKLISNEGAIPNIIEILE 472
Query: 515 QGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQSKELSLSVLVKLSG 574
G +R AL S+ ++D N +G IPPL+ L+ G + K+ +L+ L LS
Sbjct: 473 NGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSL 532
Query: 575 CSKNRELISAAG 586
S N+ AG
Sbjct: 533 NSANKGRAIDAG 544
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 673 KIAVVKANGVSLILSLLDDTDSEVREIAINLLFLFSHHEPEGVVEYLLKPK-RLEALVGF 731
++ + A + L++ LL DS ++E A+ L S E V + L+ + + ++
Sbjct: 414 RVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDE---VNKKLISNEGAIPNIIEI 470
Query: 732 LENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALF 791
LEN + + +AA L + E +T+ L +G+ ++++L+ GT+ K++AL+ALF
Sbjct: 471 LENGNREARENSAAALFSLSMLDENKVTIGLS--NGIPPLVDLLQHGTLRGKKDALTALF 528
Query: 792 RFT 794
+
Sbjct: 529 NLS 531
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 128/295 (43%), Gaps = 38/295 (12%)
Query: 46 IESVLKELQL---QKLNDSQAVRLALESLEADVEKANNLVEKYKNKSRFYLLVKCRYIVN 102
+ SV EL L Q + SQ+ L E ++ +++ +L++ S+ +LL++ +
Sbjct: 68 LASVFDELLLPRSQLVVYSQSAHLCFEEMQIVMQRIKSLIDDCSRVSKLWLLLQIDIVAF 127
Query: 103 EIQEVTRNIGRSLASLSLANTEVLSEISDQMNRLQNEMQRVEFKASQSQIVDKLNQGLRD 162
E+ ++ L L L + ++ + D ++ L + + Q VD + LR
Sbjct: 128 NFHELVTDLSTVLDILPLHDFDLSDDAQDLISLLTKQC------SDSVQFVDARDVALRR 181
Query: 163 QKLDQ--GFANDM------LEEIARAVGVPVEPSEISKELASFRREKEEAANRKERAEVL 214
+ D G + + L +I +G+ + + ++ E+ E ++ + + ++
Sbjct: 182 KVTDTIAGIKHQISPDHSTLIKIFNDLGLS-DSASLTDEIQRLEDEIQDQIDDRSKSAAA 240
Query: 215 FLDQVIE-----LLSRADAARDYEEVKKQYFQRLQIIERYDSRENYIQPLNAFKCRITGT 269
L ++ L + A D+ R+ S + P + F+C IT
Sbjct: 241 SLIGLVRYSKCVLYGPSTPAPDFR--------------RHQSLSDANIPAD-FRCPITLE 285
Query: 270 VMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSIEEW 324
+M DPV + TG T +R +I+ W+ T P+TG VL+ TSL N L+ I W
Sbjct: 286 LMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALKNLIVLW 340
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 157/366 (42%), Gaps = 51/366 (13%)
Query: 250 DSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDT 309
DSR I + F+C I+ +M DPV + TG T ERA IE W+ T P T + +
Sbjct: 267 DSRPITIP--DEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTS 324
Query: 310 SLRSNSPLRQSIEEWKELN----------------YC-----LNIRCCRAKLLSGIDSSE 348
+L N LR I +W E N C NI +KL S +
Sbjct: 325 ALTPNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQ 384
Query: 349 LEALDQMQDLMRESSINKDWISIGGITDIIISILGSSHNKDVKMKILITLKQLVKGHARN 408
A +++ L + ++ N+ I+ G +++S+L SS + + + L + H N
Sbjct: 385 RSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSI--HEDN 442
Query: 409 KEKVIDYGGWDHIVPCL--GRDPSISLAAVKLLYELMQDRSGWNVAVCRKLSQQCSGI-- 464
K +I G IV L G + AA L ++++V + G+
Sbjct: 443 KASIISSGAVPSIVHVLKNGSMEARENAAATL----------FSLSVIDEYKVTIGGMGA 492
Query: 465 --LFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSRI 522
+V L +G R + A + + + N RA ++G PLI ++ +
Sbjct: 493 IPALVVLLGEGSQRGKKDAAAALFN--LCIYQGNKGRAIRAGLV-PLIMGLVTNPTGA-- 547
Query: 523 LMMKALLSMELVDSNLE---LLGKEGIIPPLLGLVGSGNFQSKELSLSVLVKLSGCSKNR 579
LM +A+ + ++ S+ E +G +P L+ ++GSG +++E + +V++ L CS
Sbjct: 548 LMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHL--CSGEH 605
Query: 580 ELISAA 585
L+ A
Sbjct: 606 HLVHLA 611
Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 35/219 (15%)
Query: 762 LIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIG 821
+I + +I+++LK+G+MEA+ENA + LF + E + + G P LV LL G
Sbjct: 446 IISSGAVPSIVHVLKNGSMEARENAAATLFSLS--VIDEYKVTIGGMGAIPALVVLLGEG 503
Query: 822 SITAKARAAALIGTLSTSSPKFTDMPESAGCWCFRPSRAHLCQVHGGICSESTSFCLLKA 881
S K AAA + L R RA L + G+ + T + +A
Sbjct: 504 SQRGKKDAAAALFNLCIYQGNKG-----------RAIRAGLVPLIMGLVTNPTGALMDEA 552
Query: 882 NA-LPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRGVN----VLH------------- 923
A L L +G+ A E + L ++ G + N +LH
Sbjct: 553 MAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLAR 612
Query: 924 -QEEAIK-PTLEILTWGTDSLKEEALGFLEKVFMSKEMV 960
QE I P E+ GTD K +A+ LE+ MS+ +V
Sbjct: 613 AQECGIMVPLRELALNGTDRGKRKAVQLLER--MSRFLV 649
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 157/366 (42%), Gaps = 51/366 (13%)
Query: 250 DSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDT 309
DSR I + F+C I+ +M DPV + TG T ERA IE W+ T P T + +
Sbjct: 267 DSRPITIP--DEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTS 324
Query: 310 SLRSNSPLRQSIEEWKELN----------------YC-----LNIRCCRAKLLSGIDSSE 348
+L N LR I +W E N C NI +KL S +
Sbjct: 325 ALTPNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQ 384
Query: 349 LEALDQMQDLMRESSINKDWISIGGITDIIISILGSSHNKDVKMKILITLKQLVKGHARN 408
A +++ L + ++ N+ I+ G +++S+L SS + + + L + H N
Sbjct: 385 RSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSI--HEDN 442
Query: 409 KEKVIDYGGWDHIVPCL--GRDPSISLAAVKLLYELMQDRSGWNVAVCRKLSQQCSGI-- 464
K +I G IV L G + AA L ++++V + G+
Sbjct: 443 KASIISSGAVPSIVHVLKNGSMEARENAAATL----------FSLSVIDEYKVTIGGMGA 492
Query: 465 --LFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSRI 522
+V L +G R + A + + + N RA ++G PLI ++ +
Sbjct: 493 IPALVVLLGEGSQRGKKDAAAALFN--LCIYQGNKGRAIRAGLV-PLIMGLVTNPTGA-- 547
Query: 523 LMMKALLSMELVDSNLE---LLGKEGIIPPLLGLVGSGNFQSKELSLSVLVKLSGCSKNR 579
LM +A+ + ++ S+ E +G +P L+ ++GSG +++E + +V++ L CS
Sbjct: 548 LMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHL--CSGEH 605
Query: 580 ELISAA 585
L+ A
Sbjct: 606 HLVHLA 611
Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 35/219 (15%)
Query: 762 LIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIG 821
+I + +I+++LK+G+MEA+ENA + LF + E + + G P LV LL G
Sbjct: 446 IISSGAVPSIVHVLKNGSMEARENAAATLFSLS--VIDEYKVTIGGMGAIPALVVLLGEG 503
Query: 822 SITAKARAAALIGTLSTSSPKFTDMPESAGCWCFRPSRAHLCQVHGGICSESTSFCLLKA 881
S K AAA + L R RA L + G+ + T + +A
Sbjct: 504 SQRGKKDAAAALFNLCIYQGNKG-----------RAIRAGLVPLIMGLVTNPTGALMDEA 552
Query: 882 NA-LPHLVKLLQGRVHATAYEAIQTLSTLVQEGCQQRGVN----VLH------------- 923
A L L +G+ A E + L ++ G + N +LH
Sbjct: 553 MAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLAR 612
Query: 924 -QEEAIK-PTLEILTWGTDSLKEEALGFLEKVFMSKEMV 960
QE I P E+ GTD K +A+ LE+ MS+ +V
Sbjct: 613 AQECGIMVPLRELALNGTDRGKRKAVQLLER--MSRFLV 649
>sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33
PE=2 SV=2
Length = 834
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 253 ENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLR 312
E+ I P F C I VM DP G T E AI AWLD T P T V L TSL
Sbjct: 759 EHRIAP-PYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLI 817
Query: 313 SNSPLRQSIEEW 324
+N LR +I+EW
Sbjct: 818 ANHALRSAIQEW 829
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%)
Query: 250 DSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDT 309
D E YI + FKC I+ VM PVSL TG T +RA+I+ WLD T P T +L+
Sbjct: 4 DETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTK 63
Query: 310 SLRSNSPLRQSIEEWKE 326
N L++ I W +
Sbjct: 64 DFVPNLTLQRLINIWSD 80
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 256 IQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNS 315
IQ F+C I+ +M DPV++ TG T +R +I++W+ T P T V L D +L N
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNH 71
Query: 316 PLRQSIEEW 324
LR+ I+EW
Sbjct: 72 TLRRLIQEW 80
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
FKC ++ TVM DPV + +G T ER I+ W D + P + L+D +L+ N L+ I
Sbjct: 223 FKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELKSQI 282
Query: 322 EEW 324
EW
Sbjct: 283 SEW 285
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 40/82 (48%)
Query: 251 SRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTS 310
S N+ +P F C IT +M DP G T E AI W +R +T P L TS
Sbjct: 346 STSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTS 405
Query: 311 LRSNSPLRQSIEEWKELNYCLN 332
L N LR +I+EW +L LN
Sbjct: 406 LVPNLALRSAIQEWLQLRELLN 427
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 256 IQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLD-RREKTDPETGVVLEDTSLRSN 314
IQ F+C I+ +M DPV++ TG T +RA+IE+W+ T P T L D +L N
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPN 71
Query: 315 SPLRQSIEEW---------------KELNYCLNIRC--CRAKLLSGID---SSELEALDQ 354
LR+ I+EW K+ ++R +A ++G S AL +
Sbjct: 72 HTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRR 131
Query: 355 MQDLMRESSINKDWISIGGITDIIISILGS 384
++ R+S N+ I+ T+I+I IL S
Sbjct: 132 LRGFARDSDKNRVLIAAHNATEILIKILFS 161
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 15/139 (10%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTD-PETGVVLEDTSLRSNSPLRQS 320
F C I+ +M DPV + TG T +R +IE WL +K P T V+ +T L N LR+
Sbjct: 11 FLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHTLRRL 70
Query: 321 IEEWKELNYCLNIR--------CCRA---KLLSGIDSSEL---EALDQMQDLMRESSINK 366
I+ W LN I C++ KL+ SS L + L +++ ++ E++ NK
Sbjct: 71 IQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIVSENTTNK 130
Query: 367 DWISIGGITDIIISILGSS 385
+ + + + +I+ +S
Sbjct: 131 RCLEAAEVPEFLANIVSNS 149
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 257 QPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSL-RSNS 315
+P F C ITG + DPV+L TG T ER AI+ WL T P T L + L ++N
Sbjct: 510 KPPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSASILPKTNY 569
Query: 316 PLRQSIEEWKELN 328
L++ I WKE N
Sbjct: 570 VLKRLITSWKEQN 582
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 257 QPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSL-RSNS 315
+P F C ITG + DPV+L TG T ER AI+ WL T P T L + L ++N
Sbjct: 510 KPPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSASILPKTNY 569
Query: 316 PLRQSIEEWKELN 328
L++ I WKE N
Sbjct: 570 VLKRLITSWKEQN 582
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F+C I+ VM PVSL TG T +RA+I+ WLD T P T +L++ N L++ I
Sbjct: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLI 73
Query: 322 EEWKE 326
E W +
Sbjct: 74 EIWSD 78
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 257 QPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSL-RSNS 315
+P F C ITG + DPV+L TG T ER AI+ WL T P T L L ++N
Sbjct: 512 KPPKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQALSANILPKTNY 571
Query: 316 PLRQSIEEWKELN 328
L++ I WKE N
Sbjct: 572 VLKRLIVSWKEQN 584
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
FKC I+ VM PVSL TG T +R +I+ WLD T P T +L++ N L + I
Sbjct: 15 FKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLHRLI 74
Query: 322 EEWKE 326
+ W +
Sbjct: 75 DHWSD 79
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 135/341 (39%), Gaps = 47/341 (13%)
Query: 25 AAKNVVYEKESFKVLSKHLFDIESVLKELQLQKLNDSQAVRLALESLEADVEKANNLVEK 84
AA + + K LS L + S+ L+ + ++ AL SL +EKA N+++
Sbjct: 12 AASDAKLHGDMCKELSGVLCKVLSIFPSLEGARPRSKSGIQ-ALCSLHIALEKAKNILQH 70
Query: 85 YKNKSRFYLLVKCRYIVNEIQEVTRNIGRSLASLSLANTEVLSEISDQMNRLQNEMQRVE 144
S+ YL + ++ + ++ + + L V S I Q+ + E++
Sbjct: 71 CSECSKLYLAITGDAVLLKFEKAKIAL---IDGLKRVEDIVPSSIGSQILEIVGELENTR 127
Query: 145 F------KASQSQIVDKLNQGLRDQKLDQGFANDMLEEIARAVG-VPVEPSEISKELASF 197
F K QI+ L QG +K D N LE RA + + S ++ LA
Sbjct: 128 FMLDPSEKEVGDQIIALLQQG---KKFDNCNDNTELEIFHRAATRLSITSSRVA--LAER 182
Query: 198 R-------REKEEAANRKERAEVLFLDQVI---------ELLSRADAARDYEEVKKQYFQ 241
R R + E RKE V +L ++ E+L D+ Y +
Sbjct: 183 RALKKLIDRARAEEDKRKESI-VAYLLHLMRKCSKLFRSEILDENDSPGSYPCSPNEDHG 241
Query: 242 RLQIIERYDSRENYI--QPLNA------------FKCRITGTVMMDPVSLYTGTTCERAA 287
+ R SR + +P+N+ +C I+ +M DPV + +G T ER
Sbjct: 242 SVHGFGRQLSRFGSLNDKPMNSINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERVC 301
Query: 288 IEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSIEEWKELN 328
IE W T P+T L SL N+ ++ I W E N
Sbjct: 302 IEKWFSDGHNTCPKTQQQLPHISLTPNNCVKGLIASWCEQN 342
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 152/365 (41%), Gaps = 47/365 (12%)
Query: 248 RYDSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLE 307
R D R+ I P F+C I+ +M DPV + +G T ER I+ WL+ T P+T L
Sbjct: 247 RDDDRDMLIPP-EEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLT 305
Query: 308 DTSLRSNSPLRQSIEEWKELNYC-----LNIRCCRA---------------------KLL 341
+ N LR I +W E N NI + KL
Sbjct: 306 SDIMTPNYVLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLT 365
Query: 342 SGIDSSELEALDQMQDLMRESSINKDWISIGGITDIIISILGSSHNKDVKMKILITLKQL 401
S A +++ L ++++ N+ I+ G +++++L S++ + + ++ L
Sbjct: 366 SQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNL 425
Query: 402 VKGHARNKEKVIDYGGWDHIVPCL--GRDPSISLAAVKLLYELMQDRSGWNVAVCRKLSQ 459
+ V G IV L G + AA L + D + +
Sbjct: 426 SICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGA------ 479
Query: 460 QCSGILFLVTLI-KGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAE 518
I LVTL+ +G R + A + + + N +A ++G P++ R++ E
Sbjct: 480 -AGAIPPLVTLLSEGSQRGKKDAATALFN--LCIFQGNKGKAVRAGLV-PVLMRLLTEPE 535
Query: 519 SSRI---LMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQSKELSLSVLVKLSGC 575
S + L + A+LS D E +G +P L+ + SG+ ++KE S +VLV L C
Sbjct: 536 SGMVDESLSILAILSSH-PDGKSE-VGAADAVPVLVDFIRSGSPRNKENSAAVLVHL--C 591
Query: 576 SKNRE 580
S N++
Sbjct: 592 SWNQQ 596
Score = 40.0 bits (92), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 136/314 (43%), Gaps = 78/314 (24%)
Query: 541 LGKEGIIPPLLGLVG-SGNFQSKELSLSVLVKLSGCSKNR-ELISAAGGIPQVLELMFSS 598
+ G IP L+ L+ S + +++E +++ ++ LS C +N+ +++ ++G +P ++ ++
Sbjct: 393 IAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKG 452
Query: 599 HVPSNIIVKCSEILEKLSSDGIKFLVDEK----GNRLELEPIVTNLLTLQQNFNSSYNVR 654
+ + + L LS ++DE G + P+VT LL+ S +
Sbjct: 453 SMEAR--ENAAATLFSLS------VIDENKVTIGAAGAIPPLVT-LLS-----EGSQRGK 498
Query: 655 KPALRALFRICKSEAELVKIAVVKANGVSLILSLLDDTDSEVREIAINLLFLFSHHEPEG 714
K A ALF +C + K V+A V +++ LL + +S + + ++++L + S H P+G
Sbjct: 499 KDAATALFNLCIFQGN--KGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSH-PDG 555
Query: 715 VVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINI 774
KSE+ D + +++
Sbjct: 556 --------------------------------------KSEVGAA------DAVPVLVDF 571
Query: 775 LKSGTMEAKENALSALFRFTDPTN---LEAQRNVVERGVYPLLVNLLQIGSITAKARAAA 831
++SG+ KEN+ + L +EAQ+ G+ LL+ + + G+ K +AA
Sbjct: 572 IRSGSPRNKENSAAVLVHLCSWNQQHLIEAQK----LGIMDLLIEMAENGTDRGKRKAAQ 627
Query: 832 LIGTLSTSSPKFTD 845
L+ S +F D
Sbjct: 628 LLNRFS----RFND 637
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 494 EENFCRAAKSGWYKPLIDRIIQ-GAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLG 552
+EN + S P I ++Q G+ +R L S+ ++D N +G G IPPL+
Sbjct: 429 QENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVT 488
Query: 553 LVGSGNFQSKELSLSVLVKLSGCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEIL 612
L+ G+ + K+ + + L L N+ AG +P ++ L+ + S ++ + IL
Sbjct: 489 LLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLL--TEPESGMVDESLSIL 546
Query: 613 EKLSS-----------DGIKFLVD 625
LSS D + LVD
Sbjct: 547 AILSSHPDGKSEVGAADAVPVLVD 570
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 450 NVAVCR----KLSQQCSGILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGW 505
N+++C+ K+ + +V +++ E+ E A L L +DE A +G
Sbjct: 424 NLSICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGA-AGA 482
Query: 506 YKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQSKELS 565
PL+ + +G++ + AL ++ + N + G++P L+ L+ + S
Sbjct: 483 IPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDES 542
Query: 566 LSVLVKLSGCSKNRELISAAGGIPQVLELMFS 597
LS+L LS + + AA +P +++ + S
Sbjct: 543 LSILAILSSHPDGKSEVGAADAVPVLVDFIRS 574
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 129/625 (20%), Positives = 265/625 (42%), Gaps = 80/625 (12%)
Query: 27 KNVVYEKESFKVLSKHLFDIESVLKELQLQ----KLNDSQAVRLALESLEADVEKANNLV 82
K+ K S K +H+ + +EL++Q + ++V L+L L +K L+
Sbjct: 46 KHFSTNKRSVKETLRHVQTLVIFFEELRIQIRVGSIPAGRSVILSLSELHVIFQKLKFLL 105
Query: 83 EK-YKNKSRFYLLVKCRYIVNEIQEVTRNIGRSLASLSLANTEVLSEISDQMNRLQNEMQ 141
+ ++ ++ Y+L+ + +++TR+I SL + + + ++ E+++ + + + +
Sbjct: 106 DDCTRDGAKLYMLMNSGQVSAHFRDLTRSISTSLDTFPVRSVDLPGEVNELIYLVMRQTR 165
Query: 142 RVEFKASQS--QIVDKLNQGLRDQKLDQGFANDMLEEIARA---VGVPVEPSEISKELAS 196
+ E + + + +D + L + N +EI R +GV + + KE+
Sbjct: 166 KSEARPDRDDKRAIDSVYWFF---NLFENRINPNSDEILRVLDHIGVR-KWRDCVKEI-D 220
Query: 197 FRREKEEAANRKERAEVLFLDQVIELLSRADAARDYEEVKKQYFQRLQIIERYDSREN-- 254
F RE E + +K E+ L ++ + + R I+ D +
Sbjct: 221 FLRE-EISVGKKSNIEIELLSNLMGFIC---------------YCRCVILRGIDVDDEEK 264
Query: 255 --------YIQPLNA--FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGV 304
++ LN +C I+ +M DPV L +G T +R++I W T P+TG
Sbjct: 265 DKEEDDLMMVRSLNVDDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGK 324
Query: 305 VLEDTSLRSNSPLRQSIEEWKELNYCLNIRCCRAKLLSGIDSSELEALDQMQDLMRESSI 364
L T L N ++Q I+ + + N + + + K +D +E A ++ L E
Sbjct: 325 TLVSTVLVDNFSVKQVIQSYSKQNGVVMGQKGKKK----VDVAESLAAEEAGKLTAEFLA 380
Query: 365 NKDWISIGGITDIIISILGSSHNKDVKMKILITLKQLVKGHARNKEKVIDYGGWDHIVPC 424
+ I G +++ +K L+ ++ L K + +++ G + ++
Sbjct: 381 GE---LIKG-------------DEEEMVKALVEIRILTKTSTFYRSCLVEAGVVESLMKI 424
Query: 425 L-GRDPSISLAAVKLLYELMQDRSGWNVAVCRKLSQQCSGILFLVTLIK-GPVRESAECA 482
L DP I A+ + L +D +G R + + G+ +V ++ G RES + A
Sbjct: 425 LRSDDPRIQENAMAGIMNLSKDIAGKT----RIVGEDGGGLRLIVEVLNDGARRESRQYA 480
Query: 483 EKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQ------GAESSRILMMKALLSMELVDS 536
L L + + + S L+ RI++ A+ + ++ +++LL M D+
Sbjct: 481 AAALFYLSSLGDYSRLIGEISDAIPGLV-RIVKSCDYGDSAKRNALIAIRSLL-MNQPDN 538
Query: 537 NLELLGKEGIIPPLLGLVGSGNFQSKEL--SLSVLVKLSGCSKNRELISAAGGIPQVLEL 594
+ +L GI+P LL LV S S+++L K++ + GG+ +++
Sbjct: 539 HWRILAA-GIVPVLLDLVKSEEISDGVTADSMAILAKMAEYPDGMISVLRRGGLKLAVKI 597
Query: 595 MFSSHVPSNIIVKCSEILEKLSSDG 619
+ SS V C +L L +G
Sbjct: 598 LGSSEVSPATKQHCVALLLNLCHNG 622
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F C IT +M DPV G + ER AIEAW+ + +T P T + L+ T L N L+ +I
Sbjct: 421 FLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRTLKMAI 480
Query: 322 EEW 324
W
Sbjct: 481 FRW 483
>sp|Q7RXW1|VAC8_NEUCR Vacuolar protein 8 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vac-8
PE=3 SV=3
Length = 578
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 157/350 (44%), Gaps = 32/350 (9%)
Query: 504 GWYKPLIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQSKE 563
G PLI +++ + + + ++ + N + + G + PL L S + + +
Sbjct: 147 GGLAPLIRQMMSPNVEVQCNAVGCITNLATHEDNKAKIARSGALGPLTRLAKSRDMRVQR 206
Query: 564 LSLSVLVKLSGCSKNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSSDGIKFL 623
+ L+ ++ +NR+ + AG IP +++L+ S+ V ++ C+ L ++ D
Sbjct: 207 NATGALLNMTHSDENRQQLVNAGAIPVLVQLLSSTDV--DVQYYCTTALSNIAVDA---- 260
Query: 624 VDEKGNRLEL---EP-IVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKA 679
NR +L EP +V +L+ L +SS V+ A AL + E ++ +V+A
Sbjct: 261 ----NNRRKLAQTEPRLVQSLVNLMD--SSSPKVQCQAALALRNLASDEK--YQLEIVRA 312
Query: 680 NGVSLILSLLDDTDSEVREIAINLLFLFSHH---EPEGVVEYLLKPKRLEALVGFLENDA 736
+G+ +L LL + + A+ + S H E + LKP LV L +
Sbjct: 313 SGLGPLLRLLQSSYLPLILSAVACIRNISIHPMNESPIIEAGFLKP-----LVDLLGSTD 367
Query: 737 KHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINIL--KSGTMEAKENALSALFRFT 794
++Q A L NL S ++E + ++ T++++ A A+ +
Sbjct: 368 NEEIQCHAISTLRNLAASSDRNKALVLEAGAVQKCKQLVLEVPVTVQSEMTAAIAVLALS 427
Query: 795 DPTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAAALIGTLSTSSPKFT 844
D E + N++E GV+ +L+ L + SI + +AA +G LS+ ++
Sbjct: 428 D----ELKTNLLELGVFEVLIPLTKSPSIEVQGNSAAALGNLSSKVGDYS 473
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTD-PETGVVLEDTSLRSNSPLRQS 320
F C I+ +M DPV + TG T +R +IE WL +K P T + D L N LR+
Sbjct: 16 FLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHTLRRL 75
Query: 321 IEEWKELNYCLNIR--------CCRA---KLLSGIDSS---ELEALDQMQDLMRESSINK 366
I+ W LN + C++ KL+ SS +++ L +++ ++ E++ NK
Sbjct: 76 IQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQIVSENATNK 135
Query: 367 DWISIGGITDIIISILGS 384
+ G+ + + +I+ +
Sbjct: 136 RCLEAAGVPEFLANIVSN 153
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F+C I+ +M DPV + TG T +R +IE W++ KT P T VL N +R+ I
Sbjct: 35 FQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTIRKMI 94
Query: 322 EEW 324
+ W
Sbjct: 95 QGW 97
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 260 NAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQ 319
+ F C IT +M DPV G + ER A+E+W+ ++++T P T + L L N L+
Sbjct: 406 DEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLKM 465
Query: 320 SIEEWKELN 328
+I W E +
Sbjct: 466 AINRWLETH 474
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 260 NAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQ 319
+ F C IT +M DPV G + ER A+E+W+ ++++T P T + L L N L+
Sbjct: 404 DEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLKM 463
Query: 320 SIEEWKELN 328
+I W E +
Sbjct: 464 AINRWLETH 472
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 257 QPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSP 316
QP + F C I+ VM +P G T E ++ WLD +T P T + L +L N
Sbjct: 496 QPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHA 555
Query: 317 LRQSIEEWKELN 328
LR +I+EW + N
Sbjct: 556 LRSAIQEWLQRN 567
>sp|Q8N9V3|WSDU1_HUMAN WD repeat, SAM and U-box domain-containing protein 1 OS=Homo
sapiens GN=WDSUB1 PE=1 SV=3
Length = 476
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 260 NAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQ 319
+ F C IT +M DPV G + E+ A+E W+ ++++T P T +VL L N L+
Sbjct: 406 DEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLKM 465
Query: 320 SIEEWKELN 328
+I W E +
Sbjct: 466 AINRWLETH 474
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 262 FKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSI 321
F+C ++ +M DPV L +G T ++ I+ WL +T P+T VL T+L N +R+ I
Sbjct: 78 FRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIREMI 137
Query: 322 EEWKELN 328
+W + N
Sbjct: 138 SKWCKKN 144
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 509 LIDRIIQGAESSRILMMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGN 558
LID + +G ++R A+ ++ +DSN L+GK GI+ PL+ L+ GN
Sbjct: 263 LIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGN 312
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 224 SRADAARDYEEVKKQYFQRLQIIERYDSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTC 283
S A A RD+ + QRL I D + F C I+ +M DPV TG T
Sbjct: 267 SNAKALRDWPLSGNR--QRLLSIGGGDDTSFSVP--KEFSCPISLDLMRDPVVASTGQTY 322
Query: 284 ERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSIEEW 324
+R +I W++ T P +G L D L N LR I +W
Sbjct: 323 DRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALRSLISQW 363
Score = 37.4 bits (85), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 24/220 (10%)
Query: 577 KNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSSDGIKFLVDEKGNRLELEPI 636
+NR I+ G IP + L+ S+ + + + + + L+ + KG +E E
Sbjct: 432 QNRAFIADLGAIPLLCRLLLSN----DWMAQENAVTALLN---LSIFEPNKGRIMEQEGC 484
Query: 637 VTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVSLILSLLDDTDSEV 696
+ ++ + QN + ++ A LF + K+ + + V + S+L S
Sbjct: 485 LRLIVGVLQN-GWTTEAKENAAATLFSLSVVH-NFKKLIMNEPGAVEELASMLTKGTSRG 542
Query: 697 REIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSEL 756
++ A+ LF S H PE +L+ + AL+ L ND V AAG LA L K
Sbjct: 543 KKDAVMALFNLSTH-PESSAR-MLESCAVVALIQSLRNDT---VSEEAAGALALLMKQP- 596
Query: 757 SLTMKLIELDG-----LNAIINILKSGTMEAKENALSALF 791
++ L G + +++ +++ GT + KENA+SAL+
Sbjct: 597 ----SIVHLVGSSETVITSLVGLMRRGTPKGKENAVSALY 632
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 62/160 (38%), Gaps = 37/160 (23%)
Query: 260 NAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQ 319
+ F C I+ M DPV+L TG T ER+ I W + T P T L D + N L Q
Sbjct: 62 SVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTLHQ 121
Query: 320 SIEEWKELNYCLNIRCCRAKLLSGIDSSELEALDQMQDLMRESSINKDWISIGGITDIII 379
I W Y LM++ S + + I
Sbjct: 122 LIYTWFSQKYV---------------------------LMKKRSED--------VQGRAI 146
Query: 380 SILGSSHNKDVKMKI--LITLKQLVKGHARNKEKVIDYGG 417
ILG+ K K+ L LKQ+V HA K+ V+D GG
Sbjct: 147 EILGTLRKAKGKAKVHALSELKQVVMAHAIAKKTVVDEGG 186
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 242 RLQIIERYDSRENYIQP-LNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDP 300
R + IE+ S E+ P L FKC I+ +M DP G T E WL +T P
Sbjct: 216 RKETIEKSKSNESDEDPRLEDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSP 275
Query: 301 ETGVVLEDTSLRSNSPLRQSIEEWKELN 328
+T LE+ +L N LR I++W E N
Sbjct: 276 KTNKPLENHNLVPNHTLRIIIKDWLEKN 303
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 253 ENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLR 312
+ +I F C I+ +M DPV + TG T +R +I W++ T P+TG +L D+ +
Sbjct: 300 DTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIV 359
Query: 313 SNSPLRQSIEEW 324
N L+ I +W
Sbjct: 360 PNRALKNLIVQW 371
Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 23/261 (8%)
Query: 577 KNRELISAAGGIPQVLELMFSSHVPSNIIVKCSEILEKLS---SDGIKFLVDEKGNRLE- 632
+NR I+ AG IP + L+ S N I + + + L+ + K + E+G+ LE
Sbjct: 439 ENRAYIAEAGAIPHLCRLLTSE----NAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLES 494
Query: 633 LEPIVTNLLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVSLILSLLDDT 692
+ ++ + LT++ N A LF + +IA+V +L L LL +
Sbjct: 495 IVSVLVSGLTVEAQEN--------AAATLFSLSAVHEYKKRIAIVDQCVEALAL-LLQNG 545
Query: 693 DSEVREIAINLLFLFSHHEPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLP 752
++ A+ L+ S H P+ +++ + +LVG L+N+ V AAG LA L
Sbjct: 546 TPRGKKDAVTALYNLSTH-PDNC-SRMIEGGGVSSLVGALKNEG---VAEEAAGALALLV 600
Query: 753 KSELSLTMKLIELDGLNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVVER-GVY 811
+ L E + ++ +++ GT KENA++AL V+ +
Sbjct: 601 RQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCRSGGAAVAEKVLRAPAIA 660
Query: 812 PLLVNLLQIGSITAKARAAAL 832
LL LL G+ A+ +AA+L
Sbjct: 661 GLLQTLLFTGTKRARRKAASL 681
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 152/327 (46%), Gaps = 37/327 (11%)
Query: 26 AKNVVYEKESFKVLSKHLFDIESVLKELQLQK------LNDSQAVRLALESLEADVEKAN 79
+K+ K+SF+ + + ++ V +E++++ +DS A +L+ + +K
Sbjct: 45 SKHFSTNKQSFRETLRRIQNLLVVFEEIRIRIRNSRRYFHDSAAAS-SLKEIHVGFQKLK 103
Query: 80 NLVEK-YKNKSRFYLLVKCRYIVNEIQEVTRNIGRSLASLSLANTEVLSEISDQMNRLQN 138
L+E ++ +R +++ + + ++ +TR+I SL++ +A+ ++ +E+++ ++ +
Sbjct: 104 FLLEDCTRDGARLCMMMNSDQVSDHLRVLTRSISTSLSAFPVASVDLTTEVNELIDLVVR 163
Query: 139 EMQR--VEFKASQSQIVDKLNQGLRDQKLDQGFAN------DMLEEIARAVGVPVEPSEI 190
+ ++ V+ + + + V +N+ L F N D + I VG+ + +
Sbjct: 164 QARKYGVQPETNDKRAVSSINRIL------ALFVNRVVPDPDEINRILDHVGIR-KWGDC 216
Query: 191 SKELASFRREKEEAANRKERAEVLFLDQVIELLSRADAARDYEEVKKQYFQRLQIIERYD 250
KE+ E + A R + + DQV ELLS Y + R++ + ++
Sbjct: 217 VKEINFLGEEID--AERLDEKKKKSSDQV-ELLSSLMGFICY--CRCIILGRIERDDHHN 271
Query: 251 SRENYIQP----LNAFK-----CRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPE 301
E+ I+ + K C I+ +M DPV + TG T +R++I W T P
Sbjct: 272 HHEDGIKKDHDLIRGLKVEDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPI 331
Query: 302 TGVVLEDTSLRSNSPLRQSIEEWKELN 328
TG +L T L N +RQ I + + N
Sbjct: 332 TGKILTSTELVDNVSVRQVIRKHCKTN 358
Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 7/173 (4%)
Query: 662 FRICKSEAELVKIAVVKANGVSLILSLLDDTDSEVREIAINLLFLFSHHEPEGVVEYLLK 721
R+ + + +VKA V+ +L LL D ++E A+ + S H + +
Sbjct: 412 IRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTG---KSKIA 468
Query: 722 PKRLEALVGFLENDAKHDVQMAAAGLLANLPKSELSLTMKLIELDGLNAIINILKSGTM- 780
+ L+ LV L AK + ++ +A L L E + D + ++NI+K
Sbjct: 469 GEGLKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYG 528
Query: 781 -EAKENALSALFRFTDPTNLEAQRNVVERGVYPLLVNLLQIGSITAKARAAAL 832
AK +AL A+ + + V+ G P+L++LL+ G I+ A L
Sbjct: 529 DSAKRSALLAVMGLLMQS--DNHWRVLAAGAVPILLDLLRSGEISGGLTADCL 579
>sp|Q4I1B1|VAC8_GIBZE Vacuolar protein 8 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620
/ FGSC 9075 / NRRL 31084) GN=VAC8 PE=3 SV=4
Length = 559
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 171/398 (42%), Gaps = 52/398 (13%)
Query: 464 ILFLVTLIKGPVRESAECAEKILQQLFDVDEENFCRAAKSGWYKPLIDRIIQGAESSRIL 523
ILFL ++ P E A L L VD EN + G PLI +++ +
Sbjct: 92 ILFL---LQSPDIEVQRAASAALGNLA-VDTENKVLIVQLGGLTPLIRQMMSPNVEVQCN 147
Query: 524 MMKALLSMELVDSNLELLGKEGIIPPLLGLVGSGNFQSKELSLSVLVKLSGCSKNRELIS 583
+ + ++ + N + + G + PL L S + + + + L+ ++ +NR+ +
Sbjct: 148 AVGCITNLATHEENKAKIARSGALGPLTRLAKSRDMRVQRNATGALLNMTHSDENRQQLV 207
Query: 584 AAGGIPQVLELMFSSHVPSNIIVKCSEILEKLSSDGIKFLVDEKGNRLEL---EP-IVTN 639
AG IP +++L+ S V ++ C+ L ++ D NR +L EP +V +
Sbjct: 208 NAGAIPVLVQLLSSPDV--DVQYYCTTALSNIAVDA--------SNRRKLAQSEPKLVQS 257
Query: 640 LLTLQQNFNSSYNVRKPALRALFRICKSEAELVKIAVVKANGVSLILSLLDDTDSEVREI 699
L+ L ++S V+ A AL + E ++ +V+ANG+ +L LL + +
Sbjct: 258 LVNLMD--STSPKVQCQAALALRNLASDEK--YQLDIVRANGLHPLLRLLQSSYLPLILS 313
Query: 700 AINLLFLFSHH---EPEGVVEYLLKPKRLEALVGFLENDAKHDVQMAAAGLLANLPKSEL 756
A+ + S H E + LKP LV L + ++Q A L NL S
Sbjct: 314 AVACIRNISIHPMNESPIIETNFLKP-----LVDLLGSTDNEEIQCHAISTLRNLAAS-- 366
Query: 757 SLTMKLIELDG----------LNAIINILKSGTMEAKENALSALFRFTDPTNLEAQRNVV 806
S K + LD L+ I T++++ A A+ +D + + +++
Sbjct: 367 SDRNKALVLDAGAVQKCKQLVLDVPI------TVQSEMTAAIAVLALSD----DLKSHLL 416
Query: 807 ERGVYPLLVNLLQIGSITAKARAAALIGTLSTSSPKFT 844
GV +L+ L SI + +AA +G LS+ ++
Sbjct: 417 NLGVCGVLIPLTHSPSIEVQGNSAAALGNLSSKVGDYS 454
>sp|Q9SGT2|PUB58_ARATH Putative U-box domain-containing protein 58 OS=Arabidopsis thaliana
GN=PUB58 PE=2 SV=3
Length = 420
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%)
Query: 257 QPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSP 316
QP ++F C IT VM DP G T E +I WL +T P T + L +L N
Sbjct: 352 QPPSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRA 411
Query: 317 LRQSIEE 323
LR +IEE
Sbjct: 412 LRSAIEE 418
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 238 QYFQRLQIIE----RYDSRENYIQPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLD 293
+ RL+I+E + +S + ++ FKC ++ T+M+DPV +++G T E+ I WL+
Sbjct: 50 RILNRLKIVESKKRKRESDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN 109
Query: 294 RREKTDPETGVVLEDTSLRSNSPLRQSIEEW 324
+ T P VL L N + + I W
Sbjct: 110 -HDLTCPTAKQVLYRVCLTPNHLINELITRW 139
>sp|Q9SGT1|PUB57_ARATH U-box domain-containing protein 57 OS=Arabidopsis thaliana GN=PUB57
PE=2 SV=2
Length = 391
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 257 QPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSP 316
QP +F C IT VM +P G T E AI+ W++ +T P T + L S N
Sbjct: 322 QPPPSFICPITQDVMKNPHMAADGFTYELEAIQKWINTGHRTSPMTNLKLSHFSFFPNRA 381
Query: 317 LRQSIEE 323
LR +IEE
Sbjct: 382 LRSAIEE 388
>sp|Q9FKG6|PUB52_ARATH U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52
PE=2 SV=1
Length = 845
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 230 RDYEEVKKQYFQRLQIIERY-DSRENYIQ-----PLNAFKCRITGTVMMDPVSLYTGTTC 283
RD ++K Q L+ + + D +N + P + F C + VM +P G T
Sbjct: 741 RDRPDLKDQIIPALERLRKVADKAQNLLSRTPSGPPSHFICPLLKGVMNEPCVAADGYTY 800
Query: 284 ERAAIEAWLDRREKTDPETGVVLEDTSLRSNSPLRQSIEEWK 325
+R AIE WL R++ T P T + L + +L +N L +I EWK
Sbjct: 801 DREAIEEWL-RQKDTSPVTNLPLPNKNLIANYTLYSAIMEWK 841
>sp|Q9LU47|PUB53_ARATH Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana
GN=PUB53 PE=3 SV=1
Length = 819
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 257 QPLNAFKCRITGTVMMDPVSLYTGTTCERAAIEAWLDRREKTDPETGVVLEDTSLRSNSP 316
QP + F C + VM +P G T +R AIE W++ +T P T L++ +L N
Sbjct: 748 QPPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWMENH-RTSPVTNSPLQNVNLLPNHT 806
Query: 317 LRQSIEEWKELN 328
L +I EW+ N
Sbjct: 807 LYAAIVEWRNRN 818
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 330,549,949
Number of Sequences: 539616
Number of extensions: 13227271
Number of successful extensions: 48257
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 360
Number of HSP's that attempted gapping in prelim test: 47483
Number of HSP's gapped (non-prelim): 1081
length of query: 1012
length of database: 191,569,459
effective HSP length: 128
effective length of query: 884
effective length of database: 122,498,611
effective search space: 108288772124
effective search space used: 108288772124
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)