Your job contains 1 sequence.
>001800
MIRNSERARENRVDRNDQPSTQLPLLRDLLKKRSMPQDNEERNNGLDVASKRVRYGPNNH
LAMSAQMNESWQDSVSVNGVSPSVPLLDSDLNPVEQMIAMIAALLAEGERGAESLELLIS
NIHPDLLADIVISNMKHLHKTPPPLTRLGNLPVTRQIGSLSSPAQVVVLPSQINTMQSSL
LTAQVQLPSSVAAISSSLSDTATGNTSATDSKRDPRRDPRRLDPRRVATPVGVPSISTTE
DAGPVQSEFDDSSSITRPPSLDITTSAENLPAPLMTSAKSDDMTFESPSVCKMDQPNAEE
GLSRSEEIVTLPEVCASSDHRISSRAVDEDSAVVELSDVEVYGTSTSSLVESDQHTSAVS
NASAWEETCKDLPPLPLFVELTEEEQKSVRTFAVERIFESYKHLQGAECSQTRMGLLARL
IAQIDADEDIVMMLQKYVVANYQEQKGHELVLHILYHLQSLMISSSNENSSYAAAVYEKL
LLAVAKSLLDTFPASDKSFSRLLGEVPVLPDSVLQLLGNLCSSAVFDLHGKEVRDGERVT
QGLGAVWSLILGRPYYRQACLDIALKSAAHSQDEIRAKAIRLVSNKLYQLSYITENIEQY
ATNMMLSAVNQHSSNLECSQSDSADLKAEGEVGSQETSISGSQVSEPGTFEMDSVKGGQP
ISHSLSTISFPEAQRLTSLFFALCTKKPRLLQLIFDKYVQAPKSVKQAFHRHIPILIRAL
GSSCSELLHIISDPPQGSENLLTLVLQILTQETTPSSDLIATVKHLYETKLKDATILIPM
LSSLTKNEVLPIFPRLVDLPLEKFQMALAHILQGSAHTGPALTPVEVLVAIHDIVPEREG
LALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPTLVDFV
MEILSKLVSKQVWRMPKLWVGFLKCVSQTRPHSFPVLLKLPPPQLESALNKYANLRGPLA
TYASQPSLKSSIPRSILAVLGLANESHMQQLHISSLNPSDTGSSEHGATPT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001800
(1011 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2823596 - symbol:AT1G27595 species:3702 "Arabi... 2284 6.9e-237 1
TAIR|locus:2179137 - symbol:ESP4 "AT5G01400" species:3702... 1447 1.1e-156 3
UNIPROTKB|E1BJF6 - symbol:SYMPK "Uncharacterized protein"... 556 6.4e-57 2
UNIPROTKB|F1RM40 - symbol:SYMPK "Uncharacterized protein"... 556 6.4e-56 3
MGI|MGI:1915438 - symbol:Sympk "symplekin" species:10090 ... 548 1.1e-55 3
UNIPROTKB|Q92797 - symbol:SYMPK "Symplekin" species:9606 ... 551 2.0e-55 3
DICTYBASE|DDB_G0284319 - symbol:sympk "symplekin" species... 440 3.8e-49 4
FB|FBgn0037371 - symbol:Sym "Symplekin" species:7227 "Dro... 532 3.0e-47 2
RGD|1306735 - symbol:Sympk "symplekin" species:10116 "Rat... 313 7.9e-27 1
WB|WBGene00017797 - symbol:symk-1 species:6239 "Caenorhab... 223 8.6e-15 3
>TAIR|locus:2823596 [details] [associations]
symbol:AT1G27595 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] EMBL:CP002684
GenomeReviews:CT485782_GR UniGene:At.41048 KO:K06100
InterPro:IPR022075 Pfam:PF12295 EMBL:AK228694 IPI:IPI00526006
RefSeq:NP_174080.2 PaxDb:Q0WQK1 PRIDE:Q0WQK1
EnsemblPlants:AT1G27595.1 GeneID:839651 KEGG:ath:AT1G27595
TAIR:At1g27595 eggNOG:NOG285599 HOGENOM:HOG000082768
InParanoid:Q0WQK1 OMA:CFEQRTV PhylomeDB:Q0WQK1
ProtClustDB:CLSN2920233 Genevestigator:Q0WQK1 Uniprot:Q0WQK1
Length = 961
Score = 2284 (809.1 bits), Expect = 6.9e-237, P = 6.9e-237
Identities = 512/994 (51%), Positives = 649/994 (65%)
Query: 35 MPQDNEERNNGLDVASKRVRYGPNNHLAMSAQMNESWQDXXXXXXXXXXXXLLDSDLNPV 94
MPQ ++ NG +VA KRVR+ N HL Q NES Q L DS+L PV
Sbjct: 1 MPQGEDDTING-EVAPKRVRHNTNMHLTQQVQTNESLQGPVSINGISSGNHLSDSELTPV 59
Query: 95 EQMIAMIXXXXXXXXXXXXXXXXXISNIHPDLLADIVISNMKHLHKTPPPLTRLGNLPVT 154
EQM++MI IS +HPD+LADIVI++MKHL TPP L
Sbjct: 60 EQMVSMIGALLAEGDRGAASLEILISKLHPDMLADIVITSMKHLPSTPPTLA-------- 111
Query: 155 RQIGSLSSPAQVVVLPSQINTMQSSLLTAQVQLPXXXXX-XXXXXXDTATGNTSATDSKX 213
S+++PA +VV S NT+ S T QLP + + ++S D +
Sbjct: 112 ---SSVATPADIVV-SSSTNTVHSP--TPPAQLPFDPILPAGSSFSEVPSLSSSVADPRR 165
Query: 214 XXXXXXXXXXXXXVATPVGVPSISTTEDAGPVQSEFDDSSSITRPPSLDITTSAENLPAP 273
+ + VG S+ E V + D S+ +++P S+ T
Sbjct: 166 DPRRDPRRMDPRRLNSSVGPTSLPVGEGKESVPVQKDISTLLSKPVSVSAVTPGATGSVH 225
Query: 274 LMTSAKSDDMTFESPSVCKMDQPNAEEGLSRSEEIVTLPEVCASSDHRISSRAVD----- 328
S + S + +D P E +++T+P C+ ISS V
Sbjct: 226 STAVELSQNKMMGSSGIRIIDPPECRE------DLLTVPNECSYPSKEISSLDVPLSPCR 279
Query: 329 EDSAVVE----LSDVEVYG-------TSTSSLVESDQHTSAVSNASAWEETCKDLPPLPL 377
+D + E + D+++ + ++S+ + DQ A S+ +A EE+ ++L P+P
Sbjct: 280 DDEGIRETKYSVPDLDMLSVPDFDQHSPSASVPDFDQDPPAASDITAPEESYRELDPVPS 339
Query: 378 FVELTEEEQKSVRTFAVERIFESYKHLQGAECSQTRMGLLARLIAQIDADEDIVMMLQKY 437
+VELT E+ K+V A+ERI ES +H+ G +C++ RM L+ARLIA+IDA D+ +L++
Sbjct: 340 YVELTTEQSKTVGKLAIERIIESNRHVFGFDCNKIRMALIARLIARIDAGSDVATILREL 399
Query: 438 VVANYQEQKGHELVLHILYHLQSLMIXXXXXXXXYAAAVYEKLLLAVAKSLLDTFPASDK 497
+ +++E KGH+LVLH+LYHL S+ I YA VYE L++VA+S LD PASDK
Sbjct: 400 ISVDHREFKGHDLVLHVLYHLHSMAILDTDESSFYAT-VYENFLISVARSFLDALPASDK 458
Query: 498 SFSRLLGEVPVLPDSVLQLLGNLCSSAVFDLHGKEVRDGERVTQGLGAVWSLILGRPYYR 557
SFSRL GE P LPDS + LL LCS+ D GKEV D ERVTQGLGAVWSLIL RP R
Sbjct: 459 SFSRLFGEAPHLPDSAINLLDELCSTR-HDPVGKEVCDSERVTQGLGAVWSLILVRPNER 517
Query: 558 QACLDIALKSAAHSQDEIRAKAIRLVSNKLYQLSYITENIEQYATNMMLSAVNQHSSNLE 617
+ACL IALK + HS++E+RAKAIRLV+NKLY L+YI E++EQ+AT+M+L+AVN + NL
Sbjct: 518 KACLAIALKCSVHSEEEVRAKAIRLVTNKLYHLTYIAEHVEQFATDMLLTAVNSET-NLS 576
Query: 618 CSQSDSADLKAEGEVGSQETSISGSQVSEPGTFEMDSVKGGQPISHSLSTISFPEAQRLT 677
+ S + +K E + SQ T + S S G ++ S + Q S +S IS EAQRL
Sbjct: 577 QTASTAEGIKMEAK--SQITLTTESLGS--GNSDIPSQQDLQT-SREVSVISISEAQRLI 631
Query: 678 SLFFALCTKKPRLLQLIFDKYVQAPKSVKQAFHRHIPILIRALGSSCSELLHIISDPPQG 737
SLFFALC KKP LL+L+F+ Y +APK V QAFHRHIPILIR LGSS +ELL IISDPP+G
Sbjct: 632 SLFFALCKKKPSLLRLVFEVYGRAPKMVNQAFHRHIPILIRELGSSYTELLQIISDPPKG 691
Query: 738 SENLLTLVLQILTQETTPSSDLIATVKHLYETKLKDATILIPMLSSLTKNEVLPIFPRLV 797
SENLLT VLQILTQE PS DLIATVKHLYETKLKD +ILIP+LSSLTK+EVLPIFP L+
Sbjct: 692 SENLLTYVLQILTQELAPSLDLIATVKHLYETKLKDVSILIPLLSSLTKDEVLPIFPPLL 751
Query: 798 DLPLEKFQMALAHILQGSAHTGPALTPVEVLVAIHDIVPEREGLALKKITDACSACFEQR 857
+LP EKFQ+ALAHILQGSAHTGPALTP EVL+AIHDIVPE++G LKKITDACSACFEQR
Sbjct: 752 NLPPEKFQLALAHILQGSAHTGPALTPAEVLIAIHDIVPEKDGPPLKKITDACSACFEQR 811
Query: 858 TVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVSKQVWRMPK 917
TVFTQQVLAKAL QMVD+TPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLV KQ+WR+PK
Sbjct: 812 TVFTQQVLAKALGQMVDRTPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVRKQIWRLPK 871
Query: 918 LWVGFLKCVSQTRPHSFPVLLKLPPPQLESALNKYANLRGPLATYASQPSLKSSIPRSIL 977
LW GFLKCVSQT+PHSFPVLL+LP PQLES + K+ +LR L YA+QP+++SS+P S L
Sbjct: 872 LWPGFLKCVSQTKPHSFPVLLELPVPQLESIMKKFPDLRPSLTAYANQPTIRSSLPNSAL 931
Query: 978 AVLGLANESHMQQLHISSLNPSDTGSSEHGATPT 1011
+VLGL N + S ++PSD SS HGA T
Sbjct: 932 SVLGLDNGQDSR----SQMHPSDATSSIHGAALT 961
>TAIR|locus:2179137 [details] [associations]
symbol:ESP4 "AT5G01400" species:3702 "Arabidopsis
thaliana" [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=NAS] [GO:0006396 "RNA
processing" evidence=IMP] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR016024 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006396 EMBL:AL161746 GO:GO:0005847
GO:GO:0035194 KO:K06100 InterPro:IPR021850 Pfam:PF11935
InterPro:IPR022075 Pfam:PF12295 eggNOG:NOG286857
HOGENOM:HOG000082768 IPI:IPI00530276 PIR:T48162 RefSeq:NP_195760.1
UniGene:At.46243 ProteinModelPortal:Q9M033 SMR:Q9M033 IntAct:Q9M033
PaxDb:Q9M033 PRIDE:Q9M033 EnsemblPlants:AT5G01400.1 GeneID:831597
KEGG:ath:AT5G01400 TAIR:At5g01400 InParanoid:Q9M033 OMA:YFALCTK
PhylomeDB:Q9M033 ProtClustDB:CLSN2687123 Genevestigator:Q9M033
Uniprot:Q9M033
Length = 1467
Score = 1447 (514.4 bits), Expect = 1.1e-156, Sum P(3) = 1.1e-156
Identities = 315/635 (49%), Positives = 422/635 (66%)
Query: 379 VELTEEEQKSVRTFAVERIFESYKHLQGAECSQTRMGLLARLIAQIDADEDIVMMLQKYV 438
V+L++EE+ S++ RI E+YK + + SQ R LLA L + ++ D +LQ++V
Sbjct: 654 VDLSDEEKDSLQKLVFLRIVEAYKQISMSGGSQLRFSLLAHLGVEFPSELDPWKILQEHV 713
Query: 439 VANYQEQKGHELVLHILYHLQS-LMIXXXXXXXXYAAAVYEKLLLAVAKSLLDTFPASDK 497
+++Y +GHEL + +LY L AA+ YE LL VA++L D+FP SDK
Sbjct: 714 LSDYLNHEGHELTVRVLYRLYGEAEAEQDFFSSTTAASAYESFLLTVAEALRDSFPPSDK 773
Query: 498 SFSRLLGEVPVLPDSVLQLLGNLCSSAVFDLHGKEVRDGERVTQGLGAVWSLILGRPYYR 557
S S+LLG+ P LP SVL LL + C ++ K+++ G+RVTQGL AVWSLIL RP R
Sbjct: 774 SLSKLLGDSPHLPKSVLMLLESFCCPGSGEVE-KDLQHGDRVTQGLSAVWSLILMRPGIR 832
Query: 558 QACLDIALKSAAHSQDEIRAKAIRLVSNKLYQLSYITENIEQYATNMMLSAVNQHSSNLE 617
CL+IAL+SA H +EIR KAIRLV+NKLY LS+ITE IE++A + + S V+ +
Sbjct: 833 NDCLNIALQSAVHHLEEIRMKAIRLVANKLYSLSFITEQIEEFAKDRLFSVVSD-----D 887
Query: 618 CSQSDSADLKAEGEVGSQETSISGSQVSEPGTFEMDSVKGGQPISHSLSTISFPEAQRLT 677
C + D DLK+ + SISG + P E S S+ S EAQR
Sbjct: 888 CDKMD-LDLKSPPN--KPQHSISGMSMETPS--EATS-----------SSTSVTEAQRCL 931
Query: 678 SLFFALCTKKPRLL-------QLIFDKYVQAPKSVKQAFHRHIPILIRALGSSCSELLHI 730
SL+FALCTK R+ L+F+ Y A VKQA H IPIL+R +GSS SELL I
Sbjct: 932 SLYFALCTKVLRIFTILRLMTNLVFNIYKNASDPVKQAIHLQIPILVRTMGSS-SELLKI 990
Query: 731 ISDPPQGSENLLTLVLQILTQETTPSSDLIATVKHLYETKLKDATILIPMLSSLTKNEVL 790
I+DPP GS+NLL VLQ LT+ TPSS+LI T++ L++T++KD IL P+L L +++VL
Sbjct: 991 IADPPSGSDNLLIQVLQTLTEGPTPSSELILTIRKLFDTRIKDVEILFPILPFLPRDDVL 1050
Query: 791 PIFPRLVDLPLEKFQMALAHILQGSAHTGPALTPVEVLVAIHDIVPEREGLALKKITDAC 850
IFP +V+LP+EKFQ+AL+ +LQGS+ +GP L+P E L+AIH I P R+G+ LK++TDAC
Sbjct: 1051 RIFPHMVNLPMEKFQVALSRVLQGSSQSGPVLSPSEALIAIHSIDPARDGIPLKQVTDAC 1110
Query: 851 SACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVSK 910
+ CF QR FTQQVLA LNQ+V Q PLP+LFMRTV+QAI AFP L DF++EILS+LVSK
Sbjct: 1111 NTCFAQRQTFTQQVLAGVLNQLVQQIPLPMLFMRTVLQAIGAFPALSDFILEILSRLVSK 1170
Query: 911 QVWRMPKLWVGFLKCVSQTRPHSFPVLLKLPPPQLESALNKYANLRGPLATYASQPSLKS 970
Q+W+ PKLWVGFLKC T+P S+ VLL+LPP QL +AL K LR PL +ASQP ++S
Sbjct: 1171 QIWKYPKLWVGFLKCTQTTQPQSYKVLLQLPPLQLGNALTKIPALRAPLTAHASQPEIQS 1230
Query: 971 SIPRSILAVLGLANESHMQQLHISSLNPSDTGSSE 1005
S+PRS LAVLGL +S Q S + ++T +S+
Sbjct: 1231 SLPRSTLAVLGLVPDS--QGTQTSQVQANETQTSQ 1263
Score = 79 (32.9 bits), Expect = 1.1e-156, Sum P(3) = 1.1e-156
Identities = 27/97 (27%), Positives = 42/97 (43%)
Query: 89 SDLNPVEQMIAMIXXXXXXXXXXXXXXXXXISNIHPDLLADIVISNMKHLHKTPPPLTRL 148
SD P +Q++ + IS+I DLL D+V++NM H PP +
Sbjct: 412 SDSGPAQQLVGLFGTLVSQGEKAIGSLEILISSISADLLTDVVMANM---HNIPPNCSSY 468
Query: 149 --GNLPVTRQIGSLSSPAQVVVLPSQINTMQSSLLTA 183
G + + + S AQ+ PS + + S L TA
Sbjct: 469 ADGTDELVMNMCIVGSDAQIKYPPSFVAGVLS-LSTA 504
Score = 49 (22.3 bits), Expect = 1.6e-153, Sum P(3) = 1.6e-153
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 287 SPSVCKMDQPNAEEGLSRSEEIVTLPEVCASSDHRISSRAVDEDSAVVELSDVEVYGTST 346
+PSV + + +GL+ ++ V+LP V ++S SR V + +L V ++GT
Sbjct: 376 TPSVSE----ESTDGLNGNDG-VSLPRVASTSTGPSDSRGVSDSGPAQQL--VGLFGTLV 428
Query: 347 S 347
S
Sbjct: 429 S 429
Score = 38 (18.4 bits), Expect = 1.1e-156, Sum P(3) = 1.1e-156
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 984 NESHMQQLHISSLNPSDTGSSEHGATP 1010
+ES + S +P TG S+ TP
Sbjct: 1377 SESQSSPIGQSQSSPIGTGQSDMSQTP 1403
>UNIPROTKB|E1BJF6 [details] [associations]
symbol:SYMPK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR016024 GO:GO:0005886 GO:GO:0005737 GO:GO:0005654
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 KO:K06100
InterPro:IPR021850 Pfam:PF11935 CTD:8189 OMA:EACKRDN
InterPro:IPR022075 Pfam:PF12295 GeneTree:ENSGT00390000017045
EMBL:DAAA02047383 IPI:IPI00714839 RefSeq:NP_001193842.1
UniGene:Bt.44734 Ensembl:ENSBTAT00000016048 GeneID:100337373
KEGG:bta:100337373 Uniprot:E1BJF6
Length = 1272
Score = 556 (200.8 bits), Expect = 6.4e-57, Sum P(2) = 6.4e-57
Identities = 121/309 (39%), Positives = 186/309 (60%)
Query: 679 LFFALCTKKPRLLQLIFDKYVQAPKSVKQAFHRHIPILIRALGSSCSELLHIISDPPQGS 738
L+ AL + +L+ + Y +A +K+ R I IR +G + ELL ++ + P+G+
Sbjct: 793 LYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPELLLLVENCPKGA 852
Query: 739 ENLLTLVLQILTQETTPSSDLIATVKHLYETKLKDATILIPMLSSLTKNEVLPIFPRLVD 798
E L+T L LT + PS +L+ V+ LY +L D LIP+L+ L K EV+ P+L+
Sbjct: 853 ETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQALPKLIK 912
Query: 799 L-PL---EKFQMALA-HILQGSAHTGPALTPVEVLVAIHDIVPEREGLALKKITDACSAC 853
L P+ E F L +G++ P L P E+L+A+H+I + +K I A + C
Sbjct: 913 LNPIVVKEVFNRLLGTQHGEGNSALSP-LNPGELLIALHNI--DSAKCDMKSIIKATNLC 969
Query: 854 FEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVSKQVW 913
F +R V+T +VLA + Q+++Q+PLP+L MRTVIQ++ +P L FVM ILS+L+ KQVW
Sbjct: 970 FAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIMKQVW 1029
Query: 914 RMPKLWVGFLKCVSQTRPHSFPVLLKLPPPQLESALNKYANLRGPLATYASQ--PSLKSS 971
+ PK+W GF+KC +T+P SF V+L+LPP QL + +K LR PL + P ++
Sbjct: 1030 KYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVRSFTPHQQAH 1089
Query: 972 IPRSILAVL 980
IP SI+A+L
Sbjct: 1090 IPNSIMAIL 1098
Score = 113 (44.8 bits), Expect = 6.4e-57, Sum P(2) = 6.4e-57
Identities = 29/129 (22%), Positives = 63/129 (48%)
Query: 477 YEKLLLAVAKSLLDTFPASDKSFSRLLGEVPVLPDSVLQLLGNLCSSAVFDLHGKEVRDG 536
YE L+ + L + D F++++ E P++ +S L+++ C D
Sbjct: 642 YEDCLIRLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVIRKYCE------------DE 689
Query: 537 ERVTQGLGAVWSLILGRPYYRQACLDIALKSAAHSQDEIRAKAIRLVSNKLYQLSYITEN 596
R G+ + LI RP + L + L ++H +D++R++A+ + ++Y+ + E
Sbjct: 690 SRTYLGMSTLRDLIFKRPSRQFQYLHVLLDLSSHEKDKVRSQALLFIK-RMYEKEQLREY 748
Query: 597 IEQYATNMM 605
+E++A N +
Sbjct: 749 VEKFALNYL 757
Score = 90 (36.7 bits), Expect = 1.7e-54, Sum P(2) = 1.7e-54
Identities = 29/141 (20%), Positives = 68/141 (48%)
Query: 381 LTEEEQKSVRTFAVERIFESYKHLQGAECSQTRMGLLARLIAQIDADEDIVMMLQKYVVA 440
LT+ + ++++ AV+RI + K + + +Q R+ +LA L+ Q D+ ++ +++
Sbjct: 553 LTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGLKAEVL--SFILE 610
Query: 441 NYQEQKGHELVLHILYHLQSLMIXXXXXXXXYAAAVYEKLLLAVAKSLLDTFPASDKSFS 500
+ + + +L LY + + A YE L+ + L + D F+
Sbjct: 611 DVRARL--DLAFAWLYQEYNAYLAAGVKG---ALDKYEDCLIRLLSGLQEKPDQKDGIFT 665
Query: 501 RLLGEVPVLPDSVLQLLGNLC 521
+++ E P++ +S L+++ C
Sbjct: 666 KVVLEAPLITESALEVIRKYC 686
>UNIPROTKB|F1RM40 [details] [associations]
symbol:SYMPK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR016024 GO:GO:0005886 GO:GO:0005737 GO:GO:0005654
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR026003 Pfam:PF12765 InterPro:IPR021850 Pfam:PF11935
OMA:EACKRDN InterPro:IPR022075 Pfam:PF12295
GeneTree:ENSGT00390000017045 EMBL:FP102597
Ensembl:ENSSSCT00000003432 Uniprot:F1RM40
Length = 1272
Score = 556 (200.8 bits), Expect = 6.4e-56, Sum P(3) = 6.4e-56
Identities = 121/309 (39%), Positives = 185/309 (59%)
Query: 679 LFFALCTKKPRLLQLIFDKYVQAPKSVKQAFHRHIPILIRALGSSCSELLHIISDPPQGS 738
L+ AL + +L+ + Y +A +K+ R I IR +G + ELL ++ + P+G+
Sbjct: 794 LYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPELLLLVENCPKGA 853
Query: 739 ENLLTLVLQILTQETTPSSDLIATVKHLYETKLKDATILIPMLSSLTKNEVLPIFPRLVD 798
E L+T L LT + PS +L+ V+ LY +L D LIP+L+ L K EV+ P+L+
Sbjct: 854 ETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQALPKLIK 913
Query: 799 L-PL---EKFQMALA-HILQGSAHTGPALTPVEVLVAIHDIVPEREGLALKKITDACSAC 853
L P+ E F L +G++ P L P E+L+A+H+I + +K I A + C
Sbjct: 914 LNPIVVKEVFNRLLGTQHGEGNSALSP-LNPGELLIALHNI--DSAKCDMKSIIKATNLC 970
Query: 854 FEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVSKQVW 913
F +R V+T +VLA + Q++DQ+PLP+L MRTVIQ++ +P L FVM ILS+L+ KQVW
Sbjct: 971 FAERNVYTSEVLAVVMQQLMDQSPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIMKQVW 1030
Query: 914 RMPKLWVGFLKCVSQTRPHSFPVLLKLPPPQLESALNKYANLRGPLATYASQ--PSLKSS 971
+ PK+W GF+KC +T+P SF V+L+LPP QL + +K LR PL + P ++
Sbjct: 1031 KYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVRSFTPHQQAH 1090
Query: 972 IPRSILAVL 980
IP SI+ +L
Sbjct: 1091 IPNSIMTIL 1099
Score = 111 (44.1 bits), Expect = 6.4e-56, Sum P(3) = 6.4e-56
Identities = 28/129 (21%), Positives = 63/129 (48%)
Query: 477 YEKLLLAVAKSLLDTFPASDKSFSRLLGEVPVLPDSVLQLLGNLCSSAVFDLHGKEVRDG 536
YE L+ + L + D F++++ E P++ +S L+++ C +
Sbjct: 642 YEDCLIRLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVIRKYCED-----------EQ 690
Query: 537 ERVTQGLGAVWSLILGRPYYRQACLDIALKSAAHSQDEIRAKAIRLVSNKLYQLSYITEN 596
R G+ + LI RP + L + L ++H +D++R++A+ + ++Y+ + E
Sbjct: 691 SRTYLGMSTLRDLIFKRPSRQFQYLHVLLDLSSHEKDKVRSQALLFIK-RMYEKEQLREY 749
Query: 597 IEQYATNMM 605
+E++A N +
Sbjct: 750 VEKFALNYL 758
Score = 88 (36.0 bits), Expect = 1.6e-53, Sum P(3) = 1.6e-53
Identities = 28/141 (19%), Positives = 67/141 (47%)
Query: 381 LTEEEQKSVRTFAVERIFESYKHLQGAECSQTRMGLLARLIAQIDADEDIVMMLQKYVVA 440
LT+ + ++++ AV+RI + K + + +Q R+ +LA L+ Q D+ ++ +++
Sbjct: 553 LTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGLKAEVL--SFILE 610
Query: 441 NYQEQKGHELVLHILYHLQSLMIXXXXXXXXYAAAVYEKLLLAVAKSLLDTFPASDKSFS 500
+ + + +L LY + + YE L+ + L + D F+
Sbjct: 611 DVRARL--DLAFAWLYQEYNAYLAAGAAGTLDK---YEDCLIRLLSGLQEKPDQKDGIFT 665
Query: 501 RLLGEVPVLPDSVLQLLGNLC 521
+++ E P++ +S L+++ C
Sbjct: 666 KVVLEAPLITESALEVIRKYC 686
Score = 37 (18.1 bits), Expect = 6.4e-56, Sum P(3) = 6.4e-56
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 122 IHPDLLADIVISNMKHLHKTPPPLTRLGNLPVTRQIGSLSSPAQVVVLPSQINTMQSSL 180
+H +L + S + + K +L L V + SL AQ+ L + T Q+ +
Sbjct: 281 LHANLPPTLAKSQVSSVRKN----LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEI 335
>MGI|MGI:1915438 [details] [associations]
symbol:Sympk "symplekin" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005923 "tight
junction" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0035307
"positive regulation of protein dephosphorylation" evidence=ISO]
InterPro:IPR016024 MGI:MGI:1915438 GO:GO:0005886 GO:GO:0005737
GO:GO:0005654 SUPFAM:SSF48371 GO:GO:0035307 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0005856 GO:GO:0006378 GO:GO:0007155
GO:GO:0005923 InterPro:IPR021850 Pfam:PF11935 eggNOG:NOG273943
HOGENOM:HOG000046745 HOVERGEN:HBG062441 OrthoDB:EOG4C2H8Q
InterPro:IPR022075 Pfam:PF12295 EMBL:BC049852 IPI:IPI00987055
UniGene:Mm.130902 ProteinModelPortal:Q80X82 SMR:Q80X82
IntAct:Q80X82 STRING:Q80X82 PhosphoSite:Q80X82 PaxDb:Q80X82
PRIDE:Q80X82 InParanoid:Q80X82 Bgee:Q80X82 CleanEx:MM_SYMPK
Genevestigator:Q80X82 GermOnline:ENSMUSG00000023118 Uniprot:Q80X82
Length = 1284
Score = 548 (198.0 bits), Expect = 1.1e-55, Sum P(3) = 1.1e-55
Identities = 119/309 (38%), Positives = 185/309 (59%)
Query: 679 LFFALCTKKPRLLQLIFDKYVQAPKSVKQAFHRHIPILIRALGSSCSELLHIISDPPQGS 738
L+ AL + +L+ + Y +A +K+ R I IR +G + ELL ++ + P+G+
Sbjct: 793 LYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPELLLLVENCPKGA 852
Query: 739 ENLLTLVLQILTQETTPSSDLIATVKHLYETKLKDATILIPMLSSLTKNEVLPIFPRLVD 798
E L+T L LT + PS +L+ V+ LY +L D LIP+L+ L K EV+ P+L+
Sbjct: 853 ETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQALPKLIK 912
Query: 799 L-PL---EKFQMALA-HILQGSAHTGPALTPVEVLVAIHDIVPEREGLALKKITDACSAC 853
L P+ E F L +G++ P L P E+L+A+H+I + +K I A + C
Sbjct: 913 LNPIVVKEVFNRLLGTQHGEGNSALSP-LNPGELLIALHNI--DSVKCDMKSIIKATNLC 969
Query: 854 FEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVSKQVW 913
F +R V+T +VLA + Q+++Q+PLP+L MRTVIQ++ +P L FVM IL++L+ KQVW
Sbjct: 970 FAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNILARLIMKQVW 1029
Query: 914 RMPKLWVGFLKCVSQTRPHSFPVLLKLPPPQLESALNKYANLRGPLATYASQ--PSLKSS 971
+ PK+W GF+KC +T+P SF V+L+LPP QL + +K LR PL + P ++
Sbjct: 1030 KYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVRSFTPHQQAH 1089
Query: 972 IPRSILAVL 980
IP SI+ +L
Sbjct: 1090 IPNSIMTIL 1098
Score = 114 (45.2 bits), Expect = 1.1e-55, Sum P(3) = 1.1e-55
Identities = 29/129 (22%), Positives = 62/129 (48%)
Query: 477 YEKLLLAVAKSLLDTFPASDKSFSRLLGEVPVLPDSVLQLLGNLCSSAVFDLHGKEVRDG 536
YE L+ + L + D F++++ E P++ +S L+++ C D
Sbjct: 642 YEDCLICLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVIRKYCE------------DE 689
Query: 537 ERVTQGLGAVWSLILGRPYYRQACLDIALKSAAHSQDEIRAKAIRLVSNKLYQLSYITEN 596
R G+ + LI RP + L + L ++H +D +R++A+ + ++Y+ + E
Sbjct: 690 SRAYLGMSTLGDLIFKRPSRQFQYLHVLLDLSSHEKDRVRSQALLFIK-RMYEKEQLREY 748
Query: 597 IEQYATNMM 605
+E++A N +
Sbjct: 749 VEKFALNYL 757
Score = 89 (36.4 bits), Expect = 4.5e-53, Sum P(3) = 4.5e-53
Identities = 28/141 (19%), Positives = 67/141 (47%)
Query: 381 LTEEEQKSVRTFAVERIFESYKHLQGAECSQTRMGLLARLIAQIDADEDIVMMLQKYVVA 440
LT+ + ++++ AV+RI + K + + +Q R+ +LA L+ Q D+ ++ +++
Sbjct: 553 LTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGFKAEVL--SFILE 610
Query: 441 NYQEQKGHELVLHILYHLQSLMIXXXXXXXXYAAAVYEKLLLAVAKSLLDTFPASDKSFS 500
+ + + +L LY + + YE L+ + L + D F+
Sbjct: 611 DVRARL--DLAFAWLYQEYNAYLAAGTSGTLDK---YEDCLICLLSGLQEKPDQKDGIFT 665
Query: 501 RLLGEVPVLPDSVLQLLGNLC 521
+++ E P++ +S L+++ C
Sbjct: 666 KVVLEAPLITESALEVIRKYC 686
Score = 41 (19.5 bits), Expect = 1.1e-55, Sum P(3) = 1.1e-55
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 124 PDLLADIVISNMKHLHKTPP 143
PD +A++V+ +M +L +T P
Sbjct: 408 PDNVANLVLISMVYLPETMP 427
Score = 37 (18.1 bits), Expect = 2.8e-55, Sum P(3) = 2.8e-55
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 122 IHPDLLADIVISNMKHLHKTPPPLTRLGNLPVTRQIGSLSSPAQVVVLPSQINTMQSSL 180
+H +L + S + + K +L L V + SL AQ+ L + T Q+ +
Sbjct: 281 LHANLPPTLAKSQVSSVRKN----LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEI 335
>UNIPROTKB|Q92797 [details] [associations]
symbol:SYMPK "Symplekin" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005923 "tight junction"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006378 "mRNA polyadenylation" evidence=IMP]
[GO:0035307 "positive regulation of protein dephosphorylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR016024 GO:GO:0005886 GO:GO:0005737
GO:GO:0005654 SUPFAM:SSF48371 GO:GO:0035307 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0005856 GO:GO:0006378 GO:GO:0007155
GO:GO:0005923 KO:K06100 InterPro:IPR021850 Pfam:PF11935 PDB:3O2Q
PDB:3O2S PDB:4H3H PDB:4H3K PDBsum:3O2Q PDBsum:3O2S PDBsum:4H3H
PDBsum:4H3K EMBL:Y10931 EMBL:AB209024 EMBL:U88726 EMBL:BC006536
EMBL:BC006567 EMBL:BC030214 EMBL:U49240 EMBL:DB328640
IPI:IPI00023344 IPI:IPI00413614 IPI:IPI00556574 RefSeq:NP_004810.2
UniGene:Hs.515475 PDB:3O2T PDB:3ODR PDB:3ODS PDBsum:3O2T
PDBsum:3ODR PDBsum:3ODS ProteinModelPortal:Q92797 SMR:Q92797
DIP:DIP-42506N MINT:MINT-1537611 STRING:Q92797 PhosphoSite:Q92797
DMDM:71153180 PaxDb:Q92797 PRIDE:Q92797 DNASU:8189
Ensembl:ENST00000245934 GeneID:8189 KEGG:hsa:8189 UCSC:uc002pdn.3
UCSC:uc002pdq.2 CTD:8189 GeneCards:GC19M046318 H-InvDB:HIX0015243
HGNC:HGNC:22935 HPA:HPA041756 MIM:602388 neXtProt:NX_Q92797
PharmGKB:PA134896920 eggNOG:NOG273943 HOGENOM:HOG000046745
HOVERGEN:HBG062441 InParanoid:Q92797 OMA:EACKRDN OrthoDB:EOG4C2H8Q
ChiTaRS:SYMPK EvolutionaryTrace:Q92797 GenomeRNAi:8189
NextBio:30878 Bgee:Q92797 CleanEx:HS_SYMPK Genevestigator:Q92797
GermOnline:ENSG00000125755 InterPro:IPR022075 Pfam:PF12295
Uniprot:Q92797
Length = 1274
Score = 551 (199.0 bits), Expect = 2.0e-55, Sum P(3) = 2.0e-55
Identities = 120/309 (38%), Positives = 185/309 (59%)
Query: 679 LFFALCTKKPRLLQLIFDKYVQAPKSVKQAFHRHIPILIRALGSSCSELLHIISDPPQGS 738
L+ AL + +L+ + Y +A +K+ R I IR +G + ELL ++ + P+G+
Sbjct: 793 LYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPELLLLVENCPKGA 852
Query: 739 ENLLTLVLQILTQETTPSSDLIATVKHLYETKLKDATILIPMLSSLTKNEVLPIFPRLVD 798
E L+T L LT + PS +L+ V+ LY +L D LIP+L+ L K EV+ P+L+
Sbjct: 853 ETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQALPKLIK 912
Query: 799 L-PL---EKFQMALA-HILQGSAHTGPALTPVEVLVAIHDIVPEREGLALKKITDACSAC 853
L P+ E F L +G++ P L P E+L+A+H+I + +K I A + C
Sbjct: 913 LNPIVVKEVFNRLLGTQHGEGNSALSP-LNPGELLIALHNI--DSVKCDMKSIIKATNLC 969
Query: 854 FEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVSKQVW 913
F +R V+T +VLA + Q+++Q+PLP+L MRTVIQ++ +P L FVM ILS+L+ KQVW
Sbjct: 970 FAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIMKQVW 1029
Query: 914 RMPKLWVGFLKCVSQTRPHSFPVLLKLPPPQLESALNKYANLRGPLATYASQ--PSLKSS 971
+ PK+W GF+KC +T+P SF V+L+LPP QL + +K LR PL + P ++
Sbjct: 1030 KYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVRSFTPHQQAH 1089
Query: 972 IPRSILAVL 980
IP SI+ +L
Sbjct: 1090 IPNSIMTIL 1098
Score = 112 (44.5 bits), Expect = 2.0e-55, Sum P(3) = 2.0e-55
Identities = 29/129 (22%), Positives = 63/129 (48%)
Query: 477 YEKLLLAVAKSLLDTFPASDKSFSRLLGEVPVLPDSVLQLLGNLCSSAVFDLHGKEVRDG 536
YE L+ + L + D F++++ E P++ +S L+++ C D
Sbjct: 642 YEDCLIRLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVVRKYCE------------DE 689
Query: 537 ERVTQGLGAVWSLILGRPYYRQACLDIALKSAAHSQDEIRAKAIRLVSNKLYQLSYITEN 596
R G+ + LI RP + L + L ++H +D++R++A+ + ++Y+ + E
Sbjct: 690 SRTYLGMSTLRDLIFKRPSRQFQYLHVLLDLSSHEKDKVRSQALLFIK-RMYEKEQLREY 748
Query: 597 IEQYATNMM 605
+E++A N +
Sbjct: 749 VEKFALNYL 757
Score = 83 (34.3 bits), Expect = 2.1e-52, Sum P(3) = 2.1e-52
Identities = 27/141 (19%), Positives = 68/141 (48%)
Query: 381 LTEEEQKSVRTFAVERIFESYKHLQGAECSQTRMGLLARLIAQIDADEDIVMMLQKYVVA 440
LT+ + ++++ AV+RI + K + + +Q R+ +LA L+ Q ++ ++ +++
Sbjct: 553 LTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFNSGLKAEVL--SFILE 610
Query: 441 NYQEQKGHELVLHILYHLQSLMIXXXXXXXXYAAAVYEKLLLAVAKSLLDTFPASDKSFS 500
+ + + +L LY + + + YE L+ + L + D F+
Sbjct: 611 DVRARL--DLAFAWLYQEYNAYLAAGASG---SLDKYEDCLIRLLSGLQEKPDQKDGIFT 665
Query: 501 RLLGEVPVLPDSVLQLLGNLC 521
+++ E P++ +S L+++ C
Sbjct: 666 KVVLEAPLITESALEVVRKYC 686
Score = 37 (18.1 bits), Expect = 2.0e-55, Sum P(3) = 2.0e-55
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 122 IHPDLLADIVISNMKHLHKTPPPLTRLGNLPVTRQIGSLSSPAQVVVLPSQINTMQSSL 180
+H +L + S + + K +L L V + SL AQ+ L + T Q+ +
Sbjct: 281 LHANLPPTLAKSQVSSVRKN----LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEI 335
>DICTYBASE|DDB_G0284319 [details] [associations]
symbol:sympk "symplekin" species:44689 "Dictyostelium
discoideum" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR016024
dictyBase:DDB_G0284319 SUPFAM:SSF48371 GenomeReviews:CM000153_GR
EMBL:AAFI02000064 KO:K06100 InterPro:IPR021850 Pfam:PF11935
InterPro:IPR022075 Pfam:PF12295 RefSeq:XP_638671.1
EnsemblProtists:DDB0233807 GeneID:8624500 KEGG:ddi:DDB_G0284319
eggNOG:NOG286857 InParanoid:Q54PX4 OMA:PYIESIC Uniprot:Q54PX4
Length = 1493
Score = 440 (159.9 bits), Expect = 3.8e-49, Sum P(4) = 3.8e-49
Identities = 105/313 (33%), Positives = 171/313 (54%)
Query: 678 SLFFALCTKKPRLLQLIFDKYVQAPKSVKQAFHRHIPILIRALGSSCSELLHIISDPPQG 737
SL+FAL K +LL + Y + +++++ R +I+ +G S + LL +IS P G
Sbjct: 1186 SLYFALIIKNHQLLTDLLQLYPKYDENIQEVVKRLTTCVIKHIGQSSASLLQVISICPTG 1245
Query: 738 SENLLTLVLQILTQETTPSSDLIATVKHLYETKLKDATILIPMLSSLTKNEVLPIFPRLV 797
SE L +L L PSS+L+ +VK L T D L+P+L+ L K EV+ P +
Sbjct: 1246 SEELTLEILNALVLNEKPSSELVESVKTLLLTN-GDIRFLLPVLTGLKKEEVISRLPSFL 1304
Query: 798 DLPLEKFQMALAHILQGSAHTGPALTPVEVLVAIHDIVPEREGLALKKITDACSACFEQR 857
+P + +L A G L+ E+LV IH + P+ L +K + +A C +
Sbjct: 1305 SMPNKTDTNQFISVL---ASPGSPLSASELLVQIH-LTPD--SLTMKSM-EAIDFCLDME 1357
Query: 858 TVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVSKQVWRMPK 917
+F Q+++A +NQ++ Q LP LFMRT+++ + +P L F++EIL +LV++QVW+
Sbjct: 1358 DIFKQEIVAATINQLMAQAQLPKLFMRTILKTLQKYPRLKIFIVEILGRLVARQVWKDKT 1417
Query: 918 LWVGFLKCVSQTRPHSFPVLLKLPPPQLESALN--KYANLRGPLATYASQPSLKSSI--P 973
LW GF++C +P S V+L+LPP Q E A+N K+ +L+ + + Q S ++ I P
Sbjct: 1418 LWDGFIRCTKLAKPESLEVILQLPPTQFEDAINHEKHRDLKSIIIKHL-QSSKENEIRYP 1476
Query: 974 RSILAVLGLANES 986
+ L L S
Sbjct: 1477 KQNLKTLNWEKHS 1489
Score = 128 (50.1 bits), Expect = 3.8e-49, Sum P(4) = 3.8e-49
Identities = 36/139 (25%), Positives = 69/139 (49%)
Query: 522 SSAVFDLHGKEVRDGER--VTQGLGAVWSLILGRPYYRQACLDIALKSAAHSQDEIRAKA 579
SS+ + K ++D E + GLG + LI+ RP R+ C++ LK + + D +R+
Sbjct: 953 SSSPLPIDPKILQDKENEWLPIGLGILRDLIIWRPNVREYCINSLLKFSISNDDSVRSPT 1012
Query: 580 IRLVSNKLYQLSYITENIEQYATNMM--LSAVNQHSSNLECSQSDSADLKAEGEVGSQET 637
I L++N++Y TE I+ +A + L A+ +E +S A + E+ +Q+
Sbjct: 1013 INLIANQIYSKQSATEPIQLFAKEQIIHLIAIKDIEDEMEIQKSKDAAI-IYSELMNQDN 1071
Query: 638 SISGSQVSEPGTFEMDSVK 656
+I + + T ++ K
Sbjct: 1072 NIDDNAIKIEETQSIEDKK 1090
Score = 85 (35.0 bits), Expect = 3.8e-49, Sum P(4) = 3.8e-49
Identities = 71/361 (19%), Positives = 137/361 (37%)
Query: 119 ISNIHPDLLADIVISNMKHLHKTPPPLTRLGNLPVTRQIGSLSS-----------PAQVV 167
I ++ P+ + ++VI NM H+ P ++ L +P +Q L P +
Sbjct: 448 IEHLSPEFVRELVIENMSHV----PLISLLQGIPFNQQTKELFKFVDSYQNKQIKPIHFI 503
Query: 168 VLPSQINTMQSSLLTAQVQLPXXXXXXXXXXXDTATGNTSATDSKXXXXXXXXXXXXXXV 227
+Q N +QS T Q P T T T+ T + +
Sbjct: 504 SPLTQPNPLQSINNTNLPQYPSPPLKPTTTTTTTTTTTTTTTTTTPQQNSPQNQPTPFIL 563
Query: 228 ATPVGV---PSISTTEDAGPVQSEFDDSSSITR--PPSLDITTSAENLPAPLMTSAK--- 279
+ PV P S+ + + P+ + + PP + + ++ P + T K
Sbjct: 564 SPPVNKSFKPPPSSQQPSPPILQQQSPPQQPPQQLPPQIPLQPPQQSTPPIVETQIKVKK 623
Query: 280 SDDMTFESPSVCKMDQPNAEEGLSRSEEIVTLPEVCASSDHRISSRAVDEDSAVVELSD- 338
+D E K Q +E L S+E + E D + + + +++ +L +
Sbjct: 624 EEDSDDEDEE--KQLQEEEDEDLF-SKEAMEEEE----EDDEVD-KIIKKENEQQQLKEK 675
Query: 339 VEVYGTSTSSLVESDQHTSAVSNASAWEETCKDLPPLPLFVE--LTEEEQKSVRTFAVER 396
+E + +SSL N++ + P P F L++E+QK V A+ R
Sbjct: 676 MENSNSISSSLFGG----GGGDNSNGKSDVIPSFTPRPTFKAPPLSKEKQKHVGESALVR 731
Query: 397 IFESYKHLQGAECSQTRMGLLARLIAQIDADEDIVMMLQKYVVANYQEQKGHELVLHILY 456
I S + LL+R+++ E++ K++ +++ + EL L L+
Sbjct: 732 IKISEPGVMVCGKHDLWTSLLSRILSIRPDQEELQDQFIKFITQDFKNHR--ELALQWLF 789
Query: 457 H 457
+
Sbjct: 790 N 790
Score = 45 (20.9 bits), Expect = 3.8e-49, Sum P(4) = 3.8e-49
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 477 YEKLLLAVAKSLLDTFPASDKSFSRLLGEVPVLPDSVL 514
Y LL + K + FP D + + ++P + + +L
Sbjct: 848 YSTLLKKMIKQMRSHFPIKDTTIGSFILDLPFITNQLL 885
>FB|FBgn0037371 [details] [associations]
symbol:Sym "Symplekin" species:7227 "Drosophila melanogaster"
[GO:0005923 "tight junction" evidence=ISS] [GO:0006379 "mRNA
cleavage" evidence=ISS] [GO:0005848 "mRNA cleavage stimulating
factor complex" evidence=ISS] [GO:0006398 "histone mRNA 3'-end
processing" evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR016024 EMBL:AE014297
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677
GO:GO:0006378 GO:GO:0006379 GO:GO:0006398 KO:K06100
InterPro:IPR021850 Pfam:PF11935 GO:GO:0005848 eggNOG:NOG273943
OMA:EACKRDN InterPro:IPR022075 Pfam:PF12295 HOGENOM:HOG000247061
GeneTree:ENSGT00390000017045 EMBL:AY118592 RefSeq:NP_649580.1
UniGene:Dm.31227 PDB:3GS3 PDBsum:3GS3 SMR:Q8MSU4 IntAct:Q8MSU4
MINT:MINT-754132 STRING:Q8MSU4 EnsemblMetazoa:FBtr0078723
GeneID:40709 KEGG:dme:Dmel_CG2097 UCSC:CG2097-RA CTD:40709
FlyBase:FBgn0037371 InParanoid:Q8MSU4 OrthoDB:EOG44F4R1
EvolutionaryTrace:Q8MSU4 GenomeRNAi:40709 NextBio:820175
Uniprot:Q8MSU4
Length = 1165
Score = 532 (192.3 bits), Expect = 3.0e-47, Sum P(2) = 3.0e-47
Identities = 120/312 (38%), Positives = 180/312 (57%)
Query: 679 LFFALCTKKPRL-LQLIFDKYVQAPKSVKQAFHRHIPILIRALGSSCSELLHIISDPPQG 737
L F L KP + LQ I +V +K+ R + I I+ +G LL +I D P+G
Sbjct: 791 LAFTLLPYKPEVYLQQICQVFVSTSAELKRTILRSLDIPIKKMGVESPTLLQLIEDCPKG 850
Query: 738 SENLLTLVLQILTQET-TPSSDLIATVKHLYETKLKDATILIPMLSSLTKNEVLPIFPRL 796
E L+ ++ ILT+ +P +L+ V+ LY+ K+KD ++IP+LS LT++E++ + P+L
Sbjct: 851 METLVIRIIYILTERVPSPHEELVRRVRDLYQNKVKDVRVMIPVLSGLTRSELISVLPKL 910
Query: 797 VDL-PL---EKFQMALAHILQGSAHTGPALTPVEVLVAIHDIVPEREGLALKKITDACSA 852
+ L P E F L I AH A+TP ++LVA+H I + +K I A S
Sbjct: 911 IKLNPAVVKEVFNRLLG-IGAEFAHQTMAMTPTDILVALHTI--DTSVCDIKAIVKATSL 967
Query: 853 CFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVSKQV 912
C +R ++TQ+VL L Q+V+ TPLP L MRT IQ++ +P L +FVM +L +L+ KQV
Sbjct: 968 CLAERDLYTQEVLMAVLQQLVEVTPLPTLMMRTTIQSLTLYPRLANFVMNLLQRLIIKQV 1027
Query: 913 WRMPKLWVGFLKCVSQTRPHSFPVLLKLPPPQLESALNKYANLRGPLATYAS----QPSL 968
WR +W GFLK V + +P S P+LL LPP QL AL + +LR L+ YA +P
Sbjct: 1028 WRQKVIWEGFLKTVQRLKPQSMPILLHLPPAQLVDALQQCPDLRPALSEYAESMQDEPMN 1087
Query: 969 KSSIPRSILAVL 980
S I + +L ++
Sbjct: 1088 GSGITQQVLDII 1099
Score = 45 (20.9 bits), Expect = 3.0e-47, Sum P(2) = 3.0e-47
Identities = 18/82 (21%), Positives = 38/82 (46%)
Query: 364 AWEETCKDLPPLPLFVELTEEEQKSVRTFAVERIFESYKHLQGAECSQTRMGLLARLIAQ 423
A+++ +LPP LT+ + SVR ++ K+ E + T G+L L +
Sbjct: 268 AFKQLNANLPPT-----LTDSQVSSVRKSLKMQLQTLLKNRGAFEFASTIRGMLVDLGSS 322
Query: 424 IDADEDIVMMLQKYVVANYQEQ 445
+ + ++ + K +A Q++
Sbjct: 323 TNEIQKLIPKMDKQEMARRQKR 344
Score = 41 (19.5 bits), Expect = 8.0e-47, Sum P(2) = 8.0e-47
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 372 LPPLPLFV-ELTEEEQKSVRTFAVERIFESYKHLQGAECSQTRMG 415
LP LP V + +E +R ++++ + G + S+ R+G
Sbjct: 411 LPSLPTEVPQKFLQEYTPIREMSIQQQVTNISRFFGEQLSEKRLG 455
>RGD|1306735 [details] [associations]
symbol:Sympk "symplekin" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006378 "mRNA polyadenylation"
evidence=ISO] [GO:0035307 "positive regulation of protein
dephosphorylation" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] RGD:1306735 GO:GO:0005886 GO:GO:0005737 GO:GO:0005654
eggNOG:NOG273943 HOGENOM:HOG000046745 OrthoDB:EOG4C2H8Q
InterPro:IPR022075 Pfam:PF12295 EMBL:BC093391 IPI:IPI00364043
UniGene:Rn.44851 STRING:Q561R4 PhosphoSite:Q561R4 UCSC:RGD:1306735
InParanoid:Q561R4 ArrayExpress:Q561R4 Genevestigator:Q561R4
Uniprot:Q561R4
Length = 305
Score = 313 (115.2 bits), Expect = 7.9e-27, P = 7.9e-27
Identities = 61/145 (42%), Positives = 93/145 (64%)
Query: 860 FTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVSKQVWRMPKLW 919
+T +VLA + Q+++Q+PLP+L MRTVIQ++ +P L FVM IL++L+ KQVW+ PK+W
Sbjct: 1 YTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNILARLIMKQVWKYPKVW 60
Query: 920 VGFLKCVSQTRPHSFPVLLKLPPPQLESALNKYANLRGPLATYASQ--PSLKSSIPRSIL 977
GF+KC +T+P SF V+L+LPP QL + +K LR PL + P ++ IP SI+
Sbjct: 61 EGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVRSFTPHQQAHIPNSIM 120
Query: 978 AVLGLAN--ESHMQQLHISSLNPSD 1000
+L + E +++ SL D
Sbjct: 121 TILEASGKQEPEVKEAPSGSLEEDD 145
>WB|WBGene00017797 [details] [associations]
symbol:symk-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040039 "inductive
cell migration" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 EMBL:FO080489 GO:GO:0040039 KO:K06100
InterPro:IPR021850 Pfam:PF11935 eggNOG:NOG273943 InterPro:IPR022075
Pfam:PF12295 PIR:A89135 RefSeq:NP_505210.2
ProteinModelPortal:O16929 SMR:O16929 STRING:O16929 PaxDb:O16929
EnsemblMetazoa:F25G6.2 GeneID:182490 KEGG:cel:CELE_F25G6.2
UCSC:F25G6.2 CTD:182490 WormBase:F25G6.2
GeneTree:ENSGT00390000017045 HOGENOM:HOG000016361 InParanoid:O16929
OMA:LTEMLEF NextBio:917766 Uniprot:O16929
Length = 1143
Score = 223 (83.6 bits), Expect = 8.6e-15, Sum P(3) = 8.6e-15
Identities = 61/266 (22%), Positives = 122/266 (45%)
Query: 678 SLFFALCTKKPRLLQLIFDKYVQAPKSVKQAFHRHIPILIRALGSSCSELLHIISDPPQG 737
+++ L P LL + Y Q+ K+ R + + R L ++ +I D P G
Sbjct: 796 AVYSTLMPSDPLLLIPLASVYAQSTNVFKRVVLRSLEPVFRQLSQEM--VISLIEDCPYG 853
Query: 738 SENLLTLVLQILTQETTPSSDLIATVKHLYETKLKDATILIPMLSSLTKNEVLPIFPRLV 797
+E L+ ++ +LT+ TPS+DLI +K L++ + D L+P++ L + EV+ + P +
Sbjct: 854 AETLVARLVVLLTERITPSTDLIQKLKILHDERKMDIRALLPIIGGLEREEVVRLIPTFI 913
Query: 798 -DLPLEKFQMALAHILQG--SAHTGPAL-TPVEVLVAIHDIVPEREGLALKKITDACSAC 853
+K L L TG + P+EV+ H I P+ + A + + +
Sbjct: 914 FRAEYQKSVNVLFRKLYTVRDPQTGNLVFDPIEVIKEYHKIEPKNDNEA-ELLVNNLEFL 972
Query: 854 FEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVSKQVW 913
F+ + ++A+ + +P LF+ ++ F T FV + K+ K+++
Sbjct: 973 FDP-ALLKPDTASQAIEAVFKWENVPFLFLHSLYTLFHKFKTFESFVANLFYKVTEKKMY 1031
Query: 914 RMPKLWV-GFLKCVSQTRPHSFPVLL 938
+ W F KC+ + + ++P ++
Sbjct: 1032 QQSDRWKQAFFKCIKELKTKAYPAVI 1057
Score = 60 (26.2 bits), Expect = 8.6e-15, Sum P(3) = 8.6e-15
Identities = 28/149 (18%), Positives = 61/149 (40%)
Query: 477 YEKLLLAVAKSLLDTFPASDKSFSRLLGEVPVLPDSVLQLLGNLCSSAVFDLHGKEVRDG 536
Y++ + + ++L+ + F ++L E P+L + ++ L +C + ++
Sbjct: 651 YDQAMCKMLDAMLERNMEKEALFYKVLLETPLLTPNAIERLKQVCLA----------KEN 700
Query: 537 ERVTQGLGAVWSLILGRPYYRQACLDIALKSAAHSQDEIRAKAIRLVSNKLYQLSYITEN 596
E G+ + LI+ R R L + E+R+ + +V Y L +I +
Sbjct: 701 EH---GMAMLRELIMTRNRQRPQLLQFLFGLFFMERPELRSSCLEVVKELCY-LPFIRSS 756
Query: 597 IEQYATNMMLSAVNQHSSNLECSQSDSAD 625
+ A M + Q S + S+ +D
Sbjct: 757 LSDQA-RMQIHDCLQESPPMYMRSSEDSD 784
Score = 45 (20.9 bits), Expect = 8.6e-15, Sum P(3) = 8.6e-15
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 131 VISNMKHLHKTPPPLTRLGNLPVTRQ------IGSLSSPAQVVVLPSQINTMQSSLLTA 183
V +K LH PP+ G + R+ + L PA V L +I TM ++ L A
Sbjct: 274 VFDVIKALHSNVPPMLSKGQVKFLRKSFKYNLLRFLKLPASVP-LQQKITTMLTNYLGA 331
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.363 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1011 949 0.00094 122 3 11 22 0.42 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 623 (66 KB)
Total size of DFA: 403 KB (2196 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 87.15u 0.19s 87.34t Elapsed: 00:00:07
Total cpu time: 87.15u 0.19s 87.34t Elapsed: 00:00:07
Start: Mon May 20 23:03:28 2013 End: Mon May 20 23:03:35 2013