Query 001801
Match_columns 1011
No_of_seqs 633 out of 5783
Neff 9.7
Searched_HMMs 13730
Date Tue Mar 26 16:18:19 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001801.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_1098-1102//hhsearch_scop/001801hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 0 0 293.9 13.7 128 31-193 2-136 (313)
2 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 0 0 261.7 21.5 259 625-942 50-313 (313)
3 d2omza2 c.10.2.1 (A:33-416) In 100.0 4.2E-40 3.1E-44 209.6 29.6 193 643-907 191-383 (384)
4 d2omza2 c.10.2.1 (A:33-416) In 100.0 6.3E-39 4.6E-43 203.9 30.2 188 624-883 196-383 (384)
5 d1xkua_ c.10.2.7 (A:) Decorin 100.0 8E-36 5.9E-40 188.6 27.4 271 580-915 12-291 (305)
6 d1ozna_ c.10.2.7 (A:) Reticulo 100.0 1.8E-36 1.3E-40 191.8 20.1 226 631-915 17-243 (284)
7 d1ozna_ c.10.2.7 (A:) Reticulo 100.0 1.1E-36 8.3E-41 192.8 15.8 234 625-915 32-266 (284)
8 d1xkua_ c.10.2.7 (A:) Decorin 100.0 3.6E-34 2.6E-38 180.5 26.6 58 135-192 32-89 (305)
9 d1p9ag_ c.10.2.7 (G:) von Will 100.0 3.1E-34 2.3E-38 180.8 18.2 203 649-914 10-212 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 100.0 2.3E-32 1.6E-36 171.6 17.8 199 626-887 11-209 (266)
11 d1jl5a_ c.10.2.6 (A:) Leucine 100.0 2.5E-25 1.8E-29 137.0 30.1 50 135-192 39-88 (353)
12 d1z7xw1 c.10.1.1 (W:1-460) Rib 100.0 4E-31 2.9E-35 165.5 -0.7 386 182-568 2-439 (460)
13 d1jl5a_ c.10.2.6 (A:) Leucine 100.0 3.8E-24 2.8E-28 131.2 32.4 54 849-910 284-337 (353)
14 d1h6ua2 c.10.2.1 (A:36-262) In 99.9 1.8E-25 1.3E-29 137.8 17.5 202 631-906 25-226 (227)
15 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.9 1E-25 7.5E-30 138.9 13.7 79 828-906 156-234 (242)
16 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.9 2.6E-25 1.9E-29 136.9 15.1 201 626-881 30-233 (242)
17 d1h6ua2 c.10.2.1 (A:36-262) In 99.9 2.9E-24 2.1E-28 131.8 19.4 58 131-192 38-95 (227)
18 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.9 4.2E-25 3E-29 135.9 8.1 109 650-759 30-139 (192)
19 d1h6ta2 c.10.2.1 (A:31-240) In 99.9 1.2E-23 8.8E-28 128.7 15.3 72 829-906 138-209 (210)
20 d1h6ta2 c.10.2.1 (A:31-240) In 99.9 2.2E-23 1.6E-27 127.4 15.4 166 647-882 44-209 (210)
21 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.9 5.8E-24 4.2E-28 130.3 10.9 104 653-760 12-116 (192)
22 d2omxa2 c.10.2.1 (A:37-235) In 99.9 1.6E-23 1.1E-27 128.2 11.9 52 846-901 147-198 (199)
23 d2omxa2 c.10.2.1 (A:37-235) In 99.9 1.7E-21 1.2E-25 118.1 18.0 57 132-192 38-94 (199)
24 d2astb2 c.10.1.3 (B:2136-2419) 99.9 5.2E-23 3.8E-27 125.6 7.3 254 601-916 2-265 (284)
25 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.8 1.4E-21 1E-25 118.5 8.9 256 150-424 23-317 (344)
26 d1a9na_ c.10.2.4 (A:) Spliceso 99.8 1.1E-18 8.3E-23 104.3 9.4 109 647-759 16-125 (162)
27 d1m9la_ c.10.3.1 (A:) Outer ar 99.7 6.6E-19 4.8E-23 105.4 1.2 112 643-760 42-154 (198)
28 d1dcea3 c.10.2.2 (A:444-567) R 99.7 1.3E-16 9.7E-21 94.1 11.2 12 746-757 90-101 (124)
29 d1m9la_ c.10.3.1 (A:) Outer ar 99.7 3E-18 2.2E-22 102.2 -0.6 58 829-888 97-155 (198)
30 d2ifga3 c.10.2.7 (A:36-191) Hi 99.6 8.9E-16 6.5E-20 90.0 11.0 84 828-912 34-118 (156)
31 d2ifga3 c.10.2.7 (A:36-191) Hi 99.6 4.4E-16 3.2E-20 91.5 7.6 66 645-710 27-93 (156)
32 d1koha1 c.10.2.3 (A:201-362) m 98.9 1.6E-11 1.1E-15 69.2 -1.9 15 648-662 64-78 (162)
33 d1pgva_ c.10.1.1 (A:) Tropomod 98.5 1.6E-07 1.1E-11 49.5 8.2 113 254-367 12-142 (167)
34 d1io0a_ c.10.1.1 (A:) Tropomod 98.2 4.2E-07 3.1E-11 47.4 2.8 118 225-342 9-143 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00 E-value=0 Score=293.92 Aligned_cols=128 Identities=36% Similarity=0.649 Sum_probs=106.5
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC--CEEEEECCCC--CCEEEEECCCCCCCCCCCCCCCCCHHHH
Q ss_conf 99999999999511018799998568878999999866--0015735999--9659997599999998778898620132
Q 001801 31 HCIESEREALLKFKKDLKDPSNRLVSWNGAGDGADCCK--WSGVVCDNFT--GHVLELRLGNPLNHPISYHTSPAQYSII 106 (1011)
Q Consensus 31 ~~~~~~~~~ll~~~~~~~~~~~~~~~w~~~~~~~~~c~--w~gv~c~~~~--~~v~~L~l~~~~~~~~~~~~~~~~~~~~ 106 (1011)
.|.++|++||++||+++.+|. .+++|. .++|||. |.||+|+... +||+.|+|++.
T Consensus 2 ~c~~~e~~aLl~~k~~~~~~~-~l~sW~---~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~----------------- 60 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLGNPT-TLSSWL---PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGL----------------- 60 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCC---TTSCTTTTCSTTEEECCSSSCCCEEEEEEECC-----------------
T ss_pred CCCHHHHHHHHHHHHHCCCCC-CCCCCC---CCCCCCCCCCCCEEEECCCCCEEEEEEECCCC-----------------
T ss_conf 989899999999999779998-677889---99999889488969748999479889989899-----------------
Q ss_pred HHCCCCHHHHHCCCCCCC--CCCCCCCCCCCCCEEECCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 311351011100235776--1155452788898897889-9899987722469999978637898788888432489999
Q 001801 107 YRTYGAEYEAYERSKFGG--KINPSLLHFQHLNYLDLSG-NSFGGGIPRFLGSMGKLKYLNLSGAGFKGMIPHQLGNLSK 183 (1011)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~--~l~~~l~~l~~L~~L~Ls~-~~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~~p~~l~~l~~ 183 (1011)
.+.| .+|+.++++++|++|+|++ |.+.+.+|..++++++|++|++++|.+.+..+..+..+.+
T Consensus 61 --------------~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~ 126 (313)
T d1ogqa_ 61 --------------NLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126 (313)
T ss_dssp --------------CCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTT
T ss_pred --------------CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHH
T ss_conf --------------888888798478467533520202654333002431145420011020356434433222220111
Q ss_pred CCEEECCCCC
Q ss_conf 9899589998
Q 001801 184 LQYLDLVENS 193 (1011)
Q Consensus 184 L~~L~Ls~n~ 193 (1011)
|++++++.|.
T Consensus 127 L~~l~l~~N~ 136 (313)
T d1ogqa_ 127 LVTLDFSYNA 136 (313)
T ss_dssp CCEEECCSSE
T ss_pred HCCCCCCCCC
T ss_conf 0011112245
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00 E-value=0 Score=261.71 Aligned_cols=259 Identities=32% Similarity=0.583 Sum_probs=235.1
Q ss_pred CCCCEEEECCCCCCC--CCCHHHHCCCCCCEEECCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 765278611442235--6790122034586876279-7343249955247785657857578251127812218999959
Q 001801 625 GELQVLNLENNSFSG--EIPDCWMNFLYLRVLNLGN-NNFTGNLPPSLGSLGSLTLLHLQKNSLSGRIPESLSNCNRLVS 701 (1011)
Q Consensus 625 ~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 701 (1011)
..++.|+++++.+.+ .+|..++++++|++|++++ |.++|.+|..++++++|++|++++|++.+..+..+..+..|+.
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCC
T ss_conf 79889989899888888798478467533520202654333002431145420011020356434433222220111001
Q ss_pred EECCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCC-CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98679824213673576506998399711542554588123699988-68982273313344501225555710248999
Q 001801 702 LNMDGNQFSGDIPTWIGEKFSSMVILNLRSNIFDGQFPTELCFLTSL-QILDLGYNNLSGAIPKCISNLSAMVTVDYPLG 780 (1011)
Q Consensus 702 L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L-~~L~Ls~N~l~g~~p~~~~~l~~L~~~~~~~~ 780 (1011)
+++++|.+.+.+|..+. .++.++.+++++|.+.+.+|..+..+..+ +.+++++|++++..|..+.++..
T Consensus 130 l~l~~N~~~~~~p~~l~-~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~--------- 199 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSIS-SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNL--------- 199 (313)
T ss_dssp EECCSSEEESCCCGGGG-GCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCC---------
T ss_pred CCCCCCCCCCCCCHHHC-CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---------
T ss_conf 11122455556851220-67400000023553356203121443112323102246435332433222222---------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCEEEEEECCCCCCEECCCHHCCCCCCCCEEECCCCC
Q ss_conf 99998667755446799999778865421898417502342121126799744770000274100011237644125763
Q 001801 781 DTHPGITDCSLYRSCLPRPRSFSDPIEKAFLVMKGKELEYSTILYLVALIDLSKNNFSGEIPVEVTDLVALRSLNLSYNH 860 (1011)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~ 860 (1011)
..++++++.+.|.+|..++.+++++.+++++|.
T Consensus 200 -----------------------------------------------~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 232 (313)
T d1ogqa_ 200 -----------------------------------------------AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS 232 (313)
T ss_dssp -----------------------------------------------SEEECCSSEEEECCGGGCCTTSCCSEEECCSSE
T ss_pred -----------------------------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf -----------------------------------------------233333343322222222222221112222222
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 6222552125899987995758836534883544899899698336715004999864576576656799-888999989
Q 001801 861 FSGRIPDSIGAMKSIEVIDFSNNQLSEEIPRSVSNLTFLNLLNLSYNYLSGEIPTSTQLQSFDASCFIGN-DLCGSPLSR 939 (1011)
Q Consensus 861 l~g~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~~~~~~n-~l~g~~~~~ 939 (1011)
+++.+| .++.+++++.|++++|+++|.+|..++++++|+.||+++|+++|.||..+.++.++...+.|| .+||.|+.
T Consensus 233 l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~plp- 310 (313)
T d1ogqa_ 233 LAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP- 310 (313)
T ss_dssp ECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-
T ss_pred CCCCCC-CCCCCCCCCCCCCCCCEECCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC-
T ss_conf 222222-222455444444765706660876884799999897958835166898666799897886889500198988-
Q ss_pred CCC
Q ss_conf 999
Q 001801 940 NCT 942 (1011)
Q Consensus 940 ~c~ 942 (1011)
.|.
T Consensus 311 ~c~ 313 (313)
T d1ogqa_ 311 ACT 313 (313)
T ss_dssp CCC
T ss_pred CCC
T ss_conf 989
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=100.00 E-value=4.2e-40 Score=209.65 Aligned_cols=193 Identities=29% Similarity=0.382 Sum_probs=119.6
Q ss_pred HHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCC
Q ss_conf 01220345868762797343249955247785657857578251127812218999959986798242136735765069
Q 001801 643 DCWMNFLYLRVLNLGNNNFTGNLPPSLGSLGSLTLLHLQKNSLSGRIPESLSNCNRLVSLNMDGNQFSGDIPTWIGEKFS 722 (1011)
Q Consensus 643 ~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~ 722 (1011)
..+..+++++.+++++|.+++..| +...++|+.|++++|.++. + ..+..+++|+.+++++|.+.+ ++. +. .++
T Consensus 191 ~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~-~~~-~~-~~~ 263 (384)
T d2omza2 191 SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISN-LAP-LS-GLT 263 (384)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCC-CGG-GT-TCT
T ss_pred CCCCCCCCCCEEECCCCCCCCCCC--CCCCCCCCEEECCCCCCCC-C-CHHHCCCCCCHHCCCCCCCCC-CCC-CC-CCC
T ss_conf 100223532333035774478786--4445778788887777789-6-134325653410044674478-775-35-546
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98399711542554588123699988689822733133445012255557102489999999866775544679999977
Q 001801 723 SMVILNLRSNIFDGQFPTELCFLTSLQILDLGYNNLSGAIPKCISNLSAMVTVDYPLGDTHPGITDCSLYRSCLPRPRSF 802 (1011)
Q Consensus 723 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1011)
+|+.|++++|.+.+.. .+..++.++.+++++|.+.+. + .+..+..+
T Consensus 264 ~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~-~-~~~~~~~l------------------------------ 309 (384)
T d2omza2 264 KLTELKLGANQISNIS--PLAGLTALTNLELNENQLEDI-S-PISNLKNL------------------------------ 309 (384)
T ss_dssp TCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCC-G-GGGGCTTC------------------------------
T ss_pred CCCEEECCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCC-C-CCCHHCCC------------------------------
T ss_conf 6877545674457877--323565222233232333332-2-10000246------------------------------
Q ss_pred CCCCCCEEEEECCCCHHHHHHCCEEEEEECCCCCCEECCCHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 88654218984175023421211267997447700002741000112376441257636222552125899987995758
Q 001801 803 SDPIEKAFLVMKGKELEYSTILYLVALIDLSKNNFSGEIPVEVTDLVALRSLNLSYNHFSGRIPDSIGAMKSIEVIDFSN 882 (1011)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~ 882 (1011)
+.+++++|++++.. .+..+++|+.|++++|++++ +| .++++++|+.|++++
T Consensus 310 -------------------------~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~ 360 (384)
T d2omza2 310 -------------------------TYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGH 360 (384)
T ss_dssp -------------------------SEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCS
T ss_pred -------------------------CEEECCCCCCCCCC--CCCCCCCCCEEECCCCCCCC-CH-HHCCCCCCCEEECCC
T ss_conf -------------------------76777788778984--53668988989898998999-74-670899999898979
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 8365348835448998996983367
Q 001801 883 NQLSEEIPRSVSNLTFLNLLNLSYN 907 (1011)
Q Consensus 883 N~l~~~ip~~l~~l~~L~~L~ls~N 907 (1011)
|++++.+| +.++++|+.|++++|
T Consensus 361 N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 361 NQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp SCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCCCCCHH--HCCCCCCCEEECCCC
T ss_conf 95899800--003999999639789
No 4
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=100.00 E-value=6.3e-39 Score=203.89 Aligned_cols=188 Identities=26% Similarity=0.397 Sum_probs=99.6
Q ss_pred CCCCCEEEECCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 77652786114422356790122034586876279734324995524778565785757825112781221899995998
Q 001801 624 RGELQVLNLENNSFSGEIPDCWMNFLYLRVLNLGNNNFTGNLPPSLGSLGSLTLLHLQKNSLSGRIPESLSNCNRLVSLN 703 (1011)
Q Consensus 624 ~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 703 (1011)
++.++.+++++|.+++..| +...++|+.|++++|.++. + +.+..+++|+.+++++|.+++..+ +..+++|+.|+
T Consensus 196 l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~ 269 (384)
T d2omza2 196 LTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 269 (384)
T ss_dssp CTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred CCCCCEEECCCCCCCCCCC--CCCCCCCCEEECCCCCCCC-C-CHHHCCCCCCHHCCCCCCCCCCCC--CCCCCCCCEEE
T ss_conf 3532333035774478786--4445778788887777789-6-134325653410044674478775--35546687754
Q ss_pred CCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 67982421367357650699839971154255458812369998868982273313344501225555710248999999
Q 001801 704 MDGNQFSGDIPTWIGEKFSSMVILNLRSNIFDGQFPTELCFLTSLQILDLGYNNLSGAIPKCISNLSAMVTVDYPLGDTH 783 (1011)
Q Consensus 704 L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~~~~~~~~~~ 783 (1011)
+++|++.+ ++. +. .++.++.+.+..|.+++. ..+..+++++.+++++|++++..+ +..+++|
T Consensus 270 l~~~~l~~-~~~-~~-~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L----------- 331 (384)
T d2omza2 270 LGANQISN-ISP-LA-GLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDISP--VSSLTKL----------- 331 (384)
T ss_dssp CCSSCCCC-CGG-GT-TCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCGG--GGGCTTC-----------
T ss_pred CCCCCCCC-CCC-CC-CCCCCCCCCCCCCCCCCC--CCCCHHCCCCEEECCCCCCCCCCC--CCCCCCC-----------
T ss_conf 56744578-773-23-565222233232333332--210000246767777887789845--3668988-----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCEEEEEECCCCCCEECCCHHCCCCCCCCEEECCCCCCCC
Q ss_conf 98667755446799999778865421898417502342121126799744770000274100011237644125763622
Q 001801 784 PGITDCSLYRSCLPRPRSFSDPIEKAFLVMKGKELEYSTILYLVALIDLSKNNFSGEIPVEVTDLVALRSLNLSYNHFSG 863 (1011)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g 863 (1011)
+.|++++|++++ ++ .+.++++|+.|++++|++++
T Consensus 332 --------------------------------------------~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~ 365 (384)
T d2omza2 332 --------------------------------------------QRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISD 365 (384)
T ss_dssp --------------------------------------------CEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCB
T ss_pred --------------------------------------------CEEECCCCCCCC-CH-HHCCCCCCCEEECCCCCCCC
T ss_conf --------------------------------------------989898998999-74-67089999989897995899
Q ss_pred CCCCCCCCCCCCCEEECCCC
Q ss_conf 25521258999879957588
Q 001801 864 RIPDSIGAMKSIEVIDFSNN 883 (1011)
Q Consensus 864 ~ip~~l~~l~~L~~L~Ls~N 883 (1011)
.+| +.++++|+.|++++|
T Consensus 366 l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 366 LTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CGG--GTTCTTCSEEECCCE
T ss_pred CHH--HCCCCCCCEEECCCC
T ss_conf 800--003999999639789
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=8e-36 Score=188.60 Aligned_cols=271 Identities=21% Similarity=0.247 Sum_probs=150.6
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEEECCCC
Q ss_conf 96898247526766897634776345445557788880000277776527861144223567901220345868762797
Q 001801 580 LRTVDLSSNNLSGTLPLISFQLESIDLSNNAFSGSISPVLCNGMRGELQVLNLENNSFSGEIPDCWMNFLYLRVLNLGNN 659 (1011)
Q Consensus 580 L~~L~Ls~n~l~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n 659 (1011)
.+.++.+++.++...+..+..+++|++++|.++...+..+.. +++|+.|++++|.+....|..|.+++.|+.|++++|
T Consensus 12 ~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~--l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 12 LRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKN--LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp TTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTT--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHC--CCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCC
T ss_conf 999985599988519888999798978499189869657604--656523112344344523566527985578315687
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC--CCCHHHHHCCCCCCEEEECCCCCCCC
Q ss_conf 3432499552477856578575782511278122189999599867982421--36735765069983997115425545
Q 001801 660 NFTGNLPPSLGSLGSLTLLHLQKNSLSGRIPESLSNCNRLVSLNMDGNQFSG--DIPTWIGEKFSSMVILNLRSNIFDGQ 737 (1011)
Q Consensus 660 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~ip~~~~~~l~~L~~L~L~~N~l~~~ 737 (1011)
+++ .+|..+ ...+..|++.+|.+.+..+..+.....+..++...|.... ..+..+ ..+++|+.+++++|.+..
T Consensus 90 ~l~-~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~-~~l~~L~~l~l~~n~l~~- 164 (305)
T d1xkua_ 90 QLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF-QGMKKLSYIRIADTNITT- 164 (305)
T ss_dssp CCS-BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGG-GGCTTCCEEECCSSCCCS-
T ss_pred CCC-CCCCCH--HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCC-
T ss_conf 567-676400--111323210246102344445401331100001233333467776422-345656712034677451-
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 88123699988689822733133445012255557102489999999866775544679999977886542189841750
Q 001801 738 FPTELCFLTSLQILDLGYNNLSGAIPKCISNLSAMVTVDYPLGDTHPGITDCSLYRSCLPRPRSFSDPIEKAFLVMKGKE 817 (1011)
Q Consensus 738 ~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (1011)
+|..+ .++|+.|++++|...+..+..+..++.+
T Consensus 165 l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l--------------------------------------------- 197 (305)
T d1xkua_ 165 IPQGL--PPSLTELHLDGNKITKVDAASLKGLNNL--------------------------------------------- 197 (305)
T ss_dssp CCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTC---------------------------------------------
T ss_pred CCCCC--CCCCCEEECCCCCCCCCCHHHHHCCCCC---------------------------------------------
T ss_conf 67101--7766789897886778882676413413---------------------------------------------
Q ss_pred HHHHHHCCEEEEEECCCCCCEECCCHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC-----
Q ss_conf 234212112679974477000027410001123764412576362225521258999879957588365348835-----
Q 001801 818 LEYSTILYLVALIDLSKNNFSGEIPVEVTDLVALRSLNLSYNHFSGRIPDSIGAMKSIEVIDFSNNQLSEEIPRS----- 892 (1011)
Q Consensus 818 ~~~~~~~~~l~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~----- 892 (1011)
..|++++|.+++..+..+.++++|+.|+|++|.++ .+|..+..+++|+.|++++|+|+...+..
T Consensus 198 ----------~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~ 266 (305)
T d1xkua_ 198 ----------AKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG 266 (305)
T ss_dssp ----------CEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS
T ss_pred ----------CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCC
T ss_conf ----------30154455332223454334433224302554002-4631103346789898989865763810026721
Q ss_pred -CCCCCCCCEEECCCCCCC-CCCCC
Q ss_conf -448998996983367150-04999
Q 001801 893 -VSNLTFLNLLNLSYNYLS-GEIPT 915 (1011)
Q Consensus 893 -l~~l~~L~~L~ls~N~l~-g~ip~ 915 (1011)
+..+.+|+.+++++|++. ..+|.
T Consensus 267 ~~~~~~~L~~L~L~~N~~~~~~~~~ 291 (305)
T d1xkua_ 267 YNTKKASYSGVSLFSNPVQYWEIQP 291 (305)
T ss_dssp CCTTSCCCSEEECCSSSSCGGGSCG
T ss_pred HHCCCCCCCEEECCCCCCCCCCCCH
T ss_conf 0021588897889899576676897
No 6
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.8e-36 Score=191.81 Aligned_cols=226 Identities=19% Similarity=0.154 Sum_probs=138.3
Q ss_pred EECCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCC-CC
Q ss_conf 61144223567901220345868762797343249955247785657857578251127812218999959986798-24
Q 001801 631 NLENNSFSGEIPDCWMNFLYLRVLNLGNNNFTGNLPPSLGSLGSLTLLHLQKNSLSGRIPESLSNCNRLVSLNMDGN-QF 709 (1011)
Q Consensus 631 ~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l 709 (1011)
..++++++ .+|..+. +++++|+|++|+++...+..|.+++.|+.|++++|++....+..+.++..+..++...+ .+
T Consensus 17 ~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~ 93 (284)
T d1ozna_ 17 SCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93 (284)
T ss_dssp ECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTC
T ss_pred ECCCCCCC-CCCCCCC--CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 84799989-4497889--99888977488179879778641421300001344543321112122222222222210223
Q ss_pred CCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21367357650699839971154255458812369998868982273313344501225555710248999999986677
Q 001801 710 SGDIPTWIGEKFSSMVILNLRSNIFDGQFPTELCFLTSLQILDLGYNNLSGAIPKCISNLSAMVTVDYPLGDTHPGITDC 789 (1011)
Q Consensus 710 ~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~~~~~~~~~~~~~~~~ 789 (1011)
. .++...+.++++|++|++++|.+....+..+...++|+.+++++|++++..+..+..++.+
T Consensus 94 ~-~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L----------------- 155 (284)
T d1ozna_ 94 R-SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNL----------------- 155 (284)
T ss_dssp C-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-----------------
T ss_pred C-CCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCHHHHCCCCCH-----------------
T ss_conf 5-4462010101027787568854432013533200012110200143144580574043405-----------------
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCEEEEEECCCCCCEECCCHHCCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 55446799999778865421898417502342121126799744770000274100011237644125763622255212
Q 001801 790 SLYRSCLPRPRSFSDPIEKAFLVMKGKELEYSTILYLVALIDLSKNNFSGEIPVEVTDLVALRSLNLSYNHFSGRIPDSI 869 (1011)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l 869 (1011)
+.|++++|++++..+..|.++++|+.+++++|++++..|..|
T Consensus 156 --------------------------------------~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f 197 (284)
T d1ozna_ 156 --------------------------------------THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAF 197 (284)
T ss_dssp --------------------------------------CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTT
T ss_pred --------------------------------------HHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCHHHH
T ss_conf --------------------------------------022314176566256665465634131421143466281676
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 5899987995758836534883544899899698336715004999
Q 001801 870 GAMKSIEVIDFSNNQLSEEIPRSVSNLTFLNLLNLSYNYLSGEIPT 915 (1011)
Q Consensus 870 ~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~ls~N~l~g~ip~ 915 (1011)
..+++|++||+++|++.+..|..|.++.+|+.+++++|++.|.++.
T Consensus 198 ~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~~ 243 (284)
T d1ozna_ 198 RDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (284)
T ss_dssp TTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 6532000233333522100000235546568898119988787564
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.1e-36 Score=192.77 Aligned_cols=234 Identities=18% Similarity=0.194 Sum_probs=161.0
Q ss_pred CCCCEEEECCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC-CCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 765278611442235679012203458687627973432499552477856578575-7825112781221899995998
Q 001801 625 GELQVLNLENNSFSGEIPDCWMNFLYLRVLNLGNNNFTGNLPPSLGSLGSLTLLHLQ-KNSLSGRIPESLSNCNRLVSLN 703 (1011)
Q Consensus 625 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~-~N~l~~~~p~~~~~l~~L~~L~ 703 (1011)
+.++.|++++|++++..+..|.++++|++|++++|.+....+..+..++.++.+... .+.+....+..+.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEE
T ss_conf 99888977488179879778641421300001344543321112122222222222210223544620101010277875
Q ss_pred CCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 67982421367357650699839971154255458812369998868982273313344501225555710248999999
Q 001801 704 MDGNQFSGDIPTWIGEKFSSMVILNLRSNIFDGQFPTELCFLTSLQILDLGYNNLSGAIPKCISNLSAMVTVDYPLGDTH 783 (1011)
Q Consensus 704 L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~~~~~~~~~~ 783 (1011)
+++|.+.. ++........+|+.+++++|.+++..+..+..++.|+.|++++|++.+..+..+.++++|
T Consensus 112 l~~n~~~~-~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L----------- 179 (284)
T d1ozna_ 112 LDRCGLQE-LGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSL----------- 179 (284)
T ss_dssp CTTSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC-----------
T ss_pred CCCCCCCC-CCCCCCCHHCCCCHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCHHHHCCCCCC-----------
T ss_conf 68854432-013533200012110200143144580574043405022314176566256665465634-----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCEEEEEECCCCCCEECCCHHCCCCCCCCEEECCCCCCCC
Q ss_conf 98667755446799999778865421898417502342121126799744770000274100011237644125763622
Q 001801 784 PGITDCSLYRSCLPRPRSFSDPIEKAFLVMKGKELEYSTILYLVALIDLSKNNFSGEIPVEVTDLVALRSLNLSYNHFSG 863 (1011)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g 863 (1011)
+.+++++|++++..|..|.++++|+.|++++|.+++
T Consensus 180 --------------------------------------------~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~ 215 (284)
T d1ozna_ 180 --------------------------------------------DRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215 (284)
T ss_dssp --------------------------------------------CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred --------------------------------------------CHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf --------------------------------------------131421143466281676653200023333352210
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 2552125899987995758836534883544899899698336715004999
Q 001801 864 RIPDSIGAMKSIEVIDFSNNQLSEEIPRSVSNLTFLNLLNLSYNYLSGEIPT 915 (1011)
Q Consensus 864 ~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~ls~N~l~g~ip~ 915 (1011)
..|..|+.+++|+.|++++|.+...-+.. .-...++.+....+.+.|..|.
T Consensus 216 ~~~~~~~~~~~L~~L~l~~N~l~C~C~~~-~l~~~l~~~~~~~~~~~C~~p~ 266 (284)
T d1ozna_ 216 LPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQ 266 (284)
T ss_dssp CCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESG
T ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCH-HHHHHHHHCCCCCCCEEECCCH
T ss_conf 00002355465688981199887875646-9999998673888866747966
No 8
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=3.6e-34 Score=180.50 Aligned_cols=58 Identities=24% Similarity=0.228 Sum_probs=21.7
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 8988978899899987722469999978637898788888432489999989958999
Q 001801 135 HLNYLDLSGNSFGGGIPRFLGSMGKLKYLNLSGAGFKGMIPHQLGNLSKLQYLDLVEN 192 (1011)
Q Consensus 135 ~L~~L~Ls~~~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~~p~~l~~l~~L~~L~Ls~n 192 (1011)
.+++|+|++|.++...+..|.++++|++|++++|.+....|..|.++++|++|++++|
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred CCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCC
T ss_conf 9798978499189869657604656523112344344523566527985578315687
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.1e-34 Score=180.80 Aligned_cols=203 Identities=23% Similarity=0.291 Sum_probs=147.7
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEE
Q ss_conf 45868762797343249955247785657857578251127812218999959986798242136735765069983997
Q 001801 649 LYLRVLNLGNNNFTGNLPPSLGSLGSLTLLHLQKNSLSGRIPESLSNCNRLVSLNMDGNQFSGDIPTWIGEKFSSMVILN 728 (1011)
Q Consensus 649 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 728 (1011)
..+.+++.+++.++ .+|+.+. ++++.|+|++|++++..+..|.++++|++|++++|+++ .+|.. . .+++|++|+
T Consensus 10 ~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~~~-~-~l~~L~~L~ 83 (266)
T d1p9ag_ 10 ASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD-G-TLPVLGTLD 83 (266)
T ss_dssp TTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECC-S-CCTTCCEEE
T ss_pred CCCEEEECCCCCCC-EECCCCC--CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC-CCCCC-C-CCCCCCCCC
T ss_conf 89869980699988-6196757--68898988499289859778634565522135665444-43111-1-122321111
Q ss_pred ECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 11542554588123699988689822733133445012255557102489999999866775544679999977886542
Q 001801 729 LRSNIFDGQFPTELCFLTSLQILDLGYNNLSGAIPKCISNLSAMVTVDYPLGDTHPGITDCSLYRSCLPRPRSFSDPIEK 808 (1011)
Q Consensus 729 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (1011)
+++|++++ .+..+..+++|+.|++++|.+.+..+..+..+..+
T Consensus 84 Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l------------------------------------ 126 (266)
T d1p9ag_ 84 LSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGEL------------------------------------ 126 (266)
T ss_dssp CCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTC------------------------------------
T ss_pred CCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC------------------------------------
T ss_conf 12222211-11121222222222222231101100112222111------------------------------------
Q ss_pred EEEEECCCCHHHHHHCCEEEEEECCCCCCEECCCHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 18984175023421211267997447700002741000112376441257636222552125899987995758836534
Q 001801 809 AFLVMKGKELEYSTILYLVALIDLSKNNFSGEIPVEVTDLVALRSLNLSYNHFSGRIPDSIGAMKSIEVIDFSNNQLSEE 888 (1011)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~ 888 (1011)
..+++++|.+++..+..+..++.++.+++++|++++..+..++.+++|++|||++|+|+ .
T Consensus 127 -------------------~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~ 186 (266)
T d1p9ag_ 127 -------------------QELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-T 186 (266)
T ss_dssp -------------------CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-C
T ss_pred -------------------CCCCCCCCCCCEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-C
T ss_conf -------------------12212434210221233322111000000015652237200134212423430139785-5
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 88354489989969833671500499
Q 001801 889 IPRSVSNLTFLNLLNLSYNYLSGEIP 914 (1011)
Q Consensus 889 ip~~l~~l~~L~~L~ls~N~l~g~ip 914 (1011)
+|..+..+++|+.+++++|++.+.+.
T Consensus 187 lp~~~~~~~~L~~L~L~~Np~~CdC~ 212 (266)
T d1p9ag_ 187 IPKGFFGSHLLPFAFLHGNPWLCNCE 212 (266)
T ss_dssp CCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CCHHHCCCCCCCEEEECCCCCCCCCC
T ss_conf 68667778889999836999878864
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.3e-32 Score=171.64 Aligned_cols=199 Identities=19% Similarity=0.164 Sum_probs=134.3
Q ss_pred CCCEEEECCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 65278611442235679012203458687627973432499552477856578575782511278122189999599867
Q 001801 626 ELQVLNLENNSFSGEIPDCWMNFLYLRVLNLGNNNFTGNLPPSLGSLGSLTLLHLQKNSLSGRIPESLSNCNRLVSLNMD 705 (1011)
Q Consensus 626 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 705 (1011)
.+.+++.+++.++ .+|..+. +++++|+|++|.+++..+..|.++++|+.|+|++|+++.. | .+..+++|++|+++
T Consensus 11 ~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 11 SHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-Q-VDGTLPVLGTLDLS 85 (266)
T ss_dssp TCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-E-CCSCCTTCCEEECC
T ss_pred CCEEEECCCCCCC-EECCCCC--CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC-C-CCCCCCCCCCCCCC
T ss_conf 9869980699988-6196757--6889898849928985977863456552213566544443-1-11112232111112
Q ss_pred CCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98242136735765069983997115425545881236999886898227331334450122555571024899999998
Q 001801 706 GNQFSGDIPTWIGEKFSSMVILNLRSNIFDGQFPTELCFLTSLQILDLGYNNLSGAIPKCISNLSAMVTVDYPLGDTHPG 785 (1011)
Q Consensus 706 ~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~~~~~~~~~~~~ 785 (1011)
+|++. .++..+. .+++|+.|++++|.+.+..+..+..+.+++.+++++|.+....+..+..++.+
T Consensus 86 ~N~l~-~~~~~~~-~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l------------- 150 (266)
T d1p9ag_ 86 HNQLQ-SLPLLGQ-TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL------------- 150 (266)
T ss_dssp SSCCS-SCCCCTT-TCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC-------------
T ss_pred CCCCC-CCCCCCC-CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-------------
T ss_conf 22221-1111212-22222222222231101100112222111122124342102212333221110-------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCEEEEEECCCCCCEECCCHHCCCCCCCCEEECCCCCCCCCC
Q ss_conf 66775544679999977886542189841750234212112679974477000027410001123764412576362225
Q 001801 786 ITDCSLYRSCLPRPRSFSDPIEKAFLVMKGKELEYSTILYLVALIDLSKNNFSGEIPVEVTDLVALRSLNLSYNHFSGRI 865 (1011)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 865 (1011)
+.+++++|++++..+..|..+++|+.|+|++|+++ .+
T Consensus 151 ------------------------------------------~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~l 187 (266)
T d1p9ag_ 151 ------------------------------------------EKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TI 187 (266)
T ss_dssp ------------------------------------------CEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CC
T ss_pred ------------------------------------------HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CC
T ss_conf ------------------------------------------00000015652237200134212423430139785-56
Q ss_pred CCCCCCCCCCCEEECCCCCCCC
Q ss_conf 5212589998799575883653
Q 001801 866 PDSIGAMKSIEVIDFSNNQLSE 887 (1011)
Q Consensus 866 p~~l~~l~~L~~L~Ls~N~l~~ 887 (1011)
|+.+..+++|+.|+|++|.+.-
T Consensus 188 p~~~~~~~~L~~L~L~~Np~~C 209 (266)
T d1p9ag_ 188 PKGFFGSHLLPFAFLHGNPWLC 209 (266)
T ss_dssp CTTTTTTCCCSEEECCSCCBCC
T ss_pred CHHHCCCCCCCEEEECCCCCCC
T ss_conf 8667778889999836999878
No 11
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.96 E-value=2.5e-25 Score=137.03 Aligned_cols=50 Identities=20% Similarity=0.260 Sum_probs=21.5
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 8988978899899987722469999978637898788888432489999989958999
Q 001801 135 HLNYLDLSGNSFGGGIPRFLGSMGKLKYLNLSGAGFKGMIPHQLGNLSKLQYLDLVEN 192 (1011)
Q Consensus 135 ~L~~L~Ls~~~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~~p~~l~~l~~L~~L~Ls~n 192 (1011)
++++|||+++.++ .+|+. .++|++|++++|+++ .+|..+ .+|+.|++++|
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n 88 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNN 88 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSS
T ss_pred CCCEEEECCCCCC-CCCCC---CCCCCEEECCCCCCC-CCCCCH---HHHHHHHHHHC
T ss_conf 9989993799988-78898---789888989999796-336203---32033266551
No 12
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=4e-31 Score=165.52 Aligned_cols=386 Identities=21% Similarity=0.167 Sum_probs=0.0
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC--CCHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCC---
Q ss_conf 99989958999876779998789999986876999789996--4367871299998899757997999999998799---
Q 001801 182 SKLQYLDLVENSELYVDNLSWLPGLSLLQHLDLGGVNLGKA--FDWSLAINSLSSLRVLRLSGCQLDHFHPPPIVNI--- 256 (1011)
Q Consensus 182 ~~L~~L~Ls~n~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~--~~~~~~l~~l~~L~~L~Ls~~~l~~~~~~~l~~l--- 256 (1011)
.+|+.||++.+++...+-...++.+++++.|++.+|.++.. ..+..++..+++|++|++++|.++......+...
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHC
T ss_conf 98777982089588689999997677999998289999889999999998539998889795985972899999999843
Q ss_pred --CCCCEEECCCCCCCCC--HHHHHHHHCCCCCCEEECCCCCCCCCCCCCC-----CCCCCCCEEECCCCCCCC----CC
Q ss_conf --9865998899999997--0125753099997699956998865674013-----488999999687998988----74
Q 001801 257 --SSISVLDLSSNQFDQN--SLVLSWVFGLSNLVYLDLGSNDFQGSIPVGL-----QNLTSLRHLDLSYNDFNS----SI 323 (1011)
Q Consensus 257 --~~L~~L~Ls~n~~~~~--~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l-----~~l~~L~~L~L~~n~l~~----~~ 323 (1011)
.+|++|++++|.++.. ..++..+..+++|++|++++|.+.......+ .................. ..
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 161 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCC
T ss_conf 78877887788877543221012110000343200244433202345555443013554333222222322200110011
Q ss_pred CHHCCCCCCCCEEECCCCCCC----CCHHHHHHHHHCCCCEEECCCCCCCCC----CCHHCCCCCCCCEEECCCCCCCCC
Q ss_conf 311028999869982388788----740068874230254786356757688----760001789988998158668851
Q 001801 324 PNWLASFSNLVHISLRSNSLQ----GSITGFLANLSASIEVLDLSSQQLEGQ----IPRSFGRLCNLREISLSDVKMSQD 395 (1011)
Q Consensus 324 ~~~l~~l~~L~~L~L~~n~l~----~~~~~~l~~l~~~L~~L~Ls~n~l~~~----~~~~l~~l~~L~~L~L~~n~~~~~ 395 (1011)
...+.....++.+.++.+... ......+.........+++..+..... ....+...+.++.+.+..+.....
T Consensus 162 ~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~ 241 (460)
T d1z7xw1 162 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 241 (460)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHCCCCCC
T ss_conf 22233332222233222212455554323433211221001241124542101101223322222210010021122334
Q ss_pred HHHHHHHHCCCCCCCCCEEECCCCCCCC----CCCCCCCCCCCCCEEECCCCCCCCCCCCCC-----CCCCCCCEEEEEC
Q ss_conf 3577742013546776264265871022----471000599999899842775887684300-----6999674999024
Q 001801 396 ISEILDIFSSCISDRLESWDMTGCKIFG----HLTSQIGHFKSLDSLFLSHNSISGLIPSSL-----GGLSSLERVVLSN 466 (1011)
Q Consensus 396 ~~~~~~~~~~~~~~~L~~L~L~~~~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l-----~~l~~L~~L~L~~ 466 (1011)
...............++.+++++|.+.. .....+...+.++.+++++|.+.......+ .....|+.+++++
T Consensus 242 ~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~ 321 (460)
T d1z7xw1 242 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKS 321 (460)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
T ss_conf 42011000111111100001345433212334332211123433344444333224564211101233344433332333
Q ss_pred CCCCCC----CCHHHHCCCCCCCEEECCCCEEEEECCCCC-----CCCCCCCEEECCCCCCC----CCCCCCCCCCCCCC
Q ss_conf 845553----375543179984599912881000119998-----87445445653467679----97360025998878
Q 001801 467 NTLKGY----LSEIHLANLSKLVSFDVSGNALTLKVGPDW-----IPPFQLEKLDLQSCHLG----PTFPFWLLSQNVLG 533 (1011)
Q Consensus 467 n~l~~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-----~~~~~L~~L~ls~~~l~----~~~~~~l~~~~~L~ 533 (1011)
|.+... +.. .+...++|++|++++|++.......+ .....|+.|++++|.++ ..++..+..+++|+
T Consensus 322 ~~l~~~~~~~l~~-~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~ 400 (460)
T d1z7xw1 322 CSFTAACCSHFSS-VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLR 400 (460)
T ss_dssp SCCBGGGHHHHHH-HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCC
T ss_pred CCHHHHHHHHCCC-CCCCCCCHHHHHEEEECCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 4102334432133-221101111320121013576640011122045677788989799797599999999996299889
Q ss_pred EEECCCCCCCCCCCHHHHHHCC----CCCCCCCCCCCCC
Q ss_conf 8965899888986225764067----6430023365233
Q 001801 534 YLDISRSGIQDTVPARFWEASP----QLYFLNFSNSRIN 568 (1011)
Q Consensus 534 ~L~Ls~n~l~~~~~~~~~~~~~----~L~~L~ls~n~l~ 568 (1011)
+|++++|.+++.....+...+. .|+.|++.++.+.
T Consensus 401 ~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~ 439 (460)
T d1z7xw1 401 ELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 439 (460)
T ss_dssp EEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred EEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCC
T ss_conf 898999969879999999999747886678989898789
No 13
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.95 E-value=3.8e-24 Score=131.19 Aligned_cols=54 Identities=31% Similarity=0.398 Sum_probs=23.4
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 23764412576362225521258999879957588365348835448998996983367150
Q 001801 849 VALRSLNLSYNHFSGRIPDSIGAMKSIEVIDFSNNQLSEEIPRSVSNLTFLNLLNLSYNYLS 910 (1011)
Q Consensus 849 ~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~ls~N~l~ 910 (1011)
++|+.|++++|.++ .+|.. +++|+.|++++|+++ .+|.. +++|+.|++++|+++
T Consensus 284 ~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~ 337 (353)
T d1jl5a_ 284 PSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR 337 (353)
T ss_dssp TTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS
T ss_pred CCCCEEECCCCCCC-CCCCC---CCCCCEEECCCCCCC-CCCCC---CCCCCEEECCCCCCC
T ss_conf 98898979799168-35665---487998989999687-54532---288898987699189
No 14
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.94 E-value=1.8e-25 Score=137.77 Aligned_cols=202 Identities=21% Similarity=0.351 Sum_probs=102.5
Q ss_pred EECCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 61144223567901220345868762797343249955247785657857578251127812218999959986798242
Q 001801 631 NLENNSFSGEIPDCWMNFLYLRVLNLGNNNFTGNLPPSLGSLGSLTLLHLQKNSLSGRIPESLSNCNRLVSLNMDGNQFS 710 (1011)
Q Consensus 631 ~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 710 (1011)
+++.+++++.. .+..+.+|+.|++.+|.++. ++ .+..+++|+.|++++|.+++..| +..+++++.+++++|.++
T Consensus 25 ~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~ 98 (227)
T d1h6ua2 25 AAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK 98 (227)
T ss_dssp HTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS
T ss_pred HHCCCCCCCCC--CHHHCCCCCEEECCCCCCCC-CH-HHHCCCCCCEEECCCCEEECCCC--CCCCCCCCCCCCCCCCCC
T ss_conf 84888767757--98784886899777999976-64-57448888376357853202543--112334320121112222
Q ss_pred CCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 13673576506998399711542554588123699988689822733133445012255557102489999999866775
Q 001801 711 GDIPTWIGEKFSSMVILNLRSNIFDGQFPTELCFLTSLQILDLGYNNLSGAIPKCISNLSAMVTVDYPLGDTHPGITDCS 790 (1011)
Q Consensus 711 ~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~ 790 (1011)
.++ .+. .+++|+.+.++++...+. ..+...+.++.+.++++.+....+ +...+.
T Consensus 99 -~i~-~l~-~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~------------------- 152 (227)
T d1h6ua2 99 -NVS-AIA-GLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNISP--LAGLTN------------------- 152 (227)
T ss_dssp -CCG-GGT-TCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCGG--GGGCTT-------------------
T ss_pred -CCC-CCC-CCCCCCCCCCCCCCCCCC--CHHCCCCCHHHHHCHHHHHCHHHH--HCCCCC-------------------
T ss_conf -222-222-222221221222443311--000002301222000000000000--010211-------------------
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCEEEEEECCCCCCEECCCHHCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 54467999997788654218984175023421211267997447700002741000112376441257636222552125
Q 001801 791 LYRSCLPRPRSFSDPIEKAFLVMKGKELEYSTILYLVALIDLSKNNFSGEIPVEVTDLVALRSLNLSYNHFSGRIPDSIG 870 (1011)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~ 870 (1011)
++.+++++|.+++.. .++++++|+.|+|++|.+++ +| .++
T Consensus 153 ------------------------------------L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~-l~-~l~ 192 (227)
T d1h6ua2 153 ------------------------------------LQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISD-IS-PLA 192 (227)
T ss_dssp ------------------------------------CCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CG-GGG
T ss_pred ------------------------------------CCCCCCCCCCCCCCH--HHCCCCCCEECCCCCCCCCC-CH-HHC
T ss_conf ------------------------------------100233333333100--10564633564458884177-85-344
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 899987995758836534883544899899698336
Q 001801 871 AMKSIEVIDFSNNQLSEEIPRSVSNLTFLNLLNLSY 906 (1011)
Q Consensus 871 ~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~ls~ 906 (1011)
.+++|++|++++|++++..| +.++++|+.|++++
T Consensus 193 ~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 193 SLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226 (227)
T ss_dssp GCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEE
T ss_pred CCCCCCEEECCCCCCCCCCC--CCCCCCCCEEEEEC
T ss_conf 79999989795996899802--03699989897129
No 15
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=1e-25 Score=138.91 Aligned_cols=79 Identities=13% Similarity=0.026 Sum_probs=48.2
Q ss_pred EEEECCCCCCEECCCHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 7997447700002741000112376441257636222552125899987995758836534883544899899698336
Q 001801 828 ALIDLSKNNFSGEIPVEVTDLVALRSLNLSYNHFSGRIPDSIGAMKSIEVIDFSNNQLSEEIPRSVSNLTFLNLLNLSY 906 (1011)
Q Consensus 828 ~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~ls~ 906 (1011)
..+++++|+++...+..+......+.+++++|.++...+..|.++++|+.|++++|+++...+..|.+++.|+.+++++
T Consensus 156 ~~L~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 156 VILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp EEEECCSSCCCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEES
T ss_pred EEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCCCC
T ss_conf 0122001233332222222011101212354324642478866899999898979928945977973771341476788
No 16
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=2.6e-25 Score=136.94 Aligned_cols=201 Identities=13% Similarity=0.037 Sum_probs=98.3
Q ss_pred CCCEEEECCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCC-CCCCCCCCCCCEEECCC-CCCCCCCCCCCCCCCCCCEEE
Q ss_conf 6527861144223567901220345868762797343249-95524778565785757-825112781221899995998
Q 001801 626 ELQVLNLENNSFSGEIPDCWMNFLYLRVLNLGNNNFTGNL-PPSLGSLGSLTLLHLQK-NSLSGRIPESLSNCNRLVSLN 703 (1011)
Q Consensus 626 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 703 (1011)
+++.|++++|.++...+.+|.++++|++|++++|.+...+ +..|..++.++.+.+.. |.+....+..|.++++|++++
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 88999876991896496686146432321102211242010011222222222111112343222222122222222223
Q ss_pred CCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCC-CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6798242136735765069983997115425545881236999-886898227331334450122555571024899999
Q 001801 704 MDGNQFSGDIPTWIGEKFSSMVILNLRSNIFDGQFPTELCFLT-SLQILDLGYNNLSGAIPKCISNLSAMVTVDYPLGDT 782 (1011)
Q Consensus 704 L~~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~~~~~~~~~ 782 (1011)
+++|.+...-+......+..+..+...++.+....+..+.+++ .++.+++++|+++...+..+ +...+
T Consensus 110 l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~-~~~~l---------- 178 (242)
T d1xwdc1 110 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAF-NGTQL---------- 178 (242)
T ss_dssp EESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTT-TTCCE----------
T ss_pred CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC-CCHHH----------
T ss_conf 4211112554333222111122222221211122222222223310012200123333222222-20111----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCEEEEEECCCCCCEECCCHHCCCCCCCCEEECCCCCCC
Q ss_conf 99866775544679999977886542189841750234212112679974477000027410001123764412576362
Q 001801 783 HPGITDCSLYRSCLPRPRSFSDPIEKAFLVMKGKELEYSTILYLVALIDLSKNNFSGEIPVEVTDLVALRSLNLSYNHFS 862 (1011)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~ 862 (1011)
.+.+++++|+++...+..|.++++|+.|++++|+++
T Consensus 179 --------------------------------------------~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~ 214 (242)
T d1xwdc1 179 --------------------------------------------DELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 214 (242)
T ss_dssp --------------------------------------------EEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCC
T ss_pred --------------------------------------------HCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCC
T ss_conf --------------------------------------------012123543246424788668999998989799289
Q ss_pred CCCCCCCCCCCCCCEEECC
Q ss_conf 2255212589998799575
Q 001801 863 GRIPDSIGAMKSIEVIDFS 881 (1011)
Q Consensus 863 g~ip~~l~~l~~L~~L~Ls 881 (1011)
...+..|.+++.|+.++++
T Consensus 215 ~l~~~~~~~l~~L~~l~~~ 233 (242)
T d1xwdc1 215 SLPSYGLENLKKLRARSTY 233 (242)
T ss_dssp CCCSSSCTTCCEEESSSEE
T ss_pred CCCHHHHCCCCCCCCCCCC
T ss_conf 4597797377134147678
No 17
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.93 E-value=2.9e-24 Score=131.76 Aligned_cols=58 Identities=24% Similarity=0.316 Sum_probs=27.3
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 27888988978899899987722469999978637898788888432489999989958999
Q 001801 131 LHFQHLNYLDLSGNSFGGGIPRFLGSMGKLKYLNLSGAGFKGMIPHQLGNLSKLQYLDLVEN 192 (1011)
Q Consensus 131 ~~l~~L~~L~Ls~~~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~~p~~l~~l~~L~~L~Ls~n 192 (1011)
..+.+|++|++.+|.++. + ..+.++++|++|++++|.+.+..| +.++++|+++++++|
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n 95 (227)
T d1h6ua2 38 ADLDGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGN 95 (227)
T ss_dssp HHHHTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSC
T ss_pred HHCCCCCEEECCCCCCCC-C-HHHHCCCCCCEEECCCCEEECCCC--CCCCCCCCCCCCCCC
T ss_conf 784886899777999976-6-457448888376357853202543--112334320121112
No 18
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.91 E-value=4.2e-25 Score=135.92 Aligned_cols=109 Identities=24% Similarity=0.318 Sum_probs=48.5
Q ss_pred CCCEEECCCCCCCCC-CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEE
Q ss_conf 586876279734324-9955247785657857578251127812218999959986798242136735765069983997
Q 001801 650 YLRVLNLGNNNFTGN-LPPSLGSLGSLTLLHLQKNSLSGRIPESLSNCNRLVSLNMDGNQFSGDIPTWIGEKFSSMVILN 728 (1011)
Q Consensus 650 ~L~~L~Ls~n~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 728 (1011)
++++|+|++|++++. .+..|.++++|+.|++++|.+....+..+..+++|++|++++|++. .+|...+.++++|++|+
T Consensus 30 ~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~-~l~~~~F~~l~~L~~L~ 108 (192)
T d1w8aa_ 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK-EISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCC-EECSSSSTTCTTCCEEE
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCC-CCCHHHHHCCCCCCCCC
T ss_conf 87889848987755302002578762721301363221212122211222210100355344-34979980797465524
Q ss_pred ECCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 1154255458812369998868982273313
Q 001801 729 LRSNIFDGQFPTELCFLTSLQILDLGYNNLS 759 (1011)
Q Consensus 729 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 759 (1011)
|++|.+++..+..|..+++|+.++|++|++.
T Consensus 109 L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
T ss_conf 5774535359778568753342000364434
No 19
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.91 E-value=1.2e-23 Score=128.73 Aligned_cols=72 Identities=21% Similarity=0.347 Sum_probs=42.1
Q ss_pred EEECCCCCCEECCCHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 997447700002741000112376441257636222552125899987995758836534883544899899698336
Q 001801 829 LIDLSKNNFSGEIPVEVTDLVALRSLNLSYNHFSGRIPDSIGAMKSIEVIDFSNNQLSEEIPRSVSNLTFLNLLNLSY 906 (1011)
Q Consensus 829 ~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~ls~ 906 (1011)
.++++.|.+++ +..+..+++|+.+++++|.+++. + .++++++|+.|++++|+++. +| .+..+++|+.|++++
T Consensus 138 ~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i-~-~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 138 SLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDI-V-PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp EEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred CCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCC-C-CCCCCCCCCEEECCCCCCCC-CH-HHCCCCCCCEEECCC
T ss_conf 21122233345--43100013321001346430256-4-53678989999897998998-72-116999989997118
No 20
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.91 E-value=2.2e-23 Score=127.42 Aligned_cols=166 Identities=23% Similarity=0.362 Sum_probs=89.3
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCE
Q ss_conf 03458687627973432499552477856578575782511278122189999599867982421367357650699839
Q 001801 647 NFLYLRVLNLGNNNFTGNLPPSLGSLGSLTLLHLQKNSLSGRIPESLSNCNRLVSLNMDGNQFSGDIPTWIGEKFSSMVI 726 (1011)
Q Consensus 647 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~ 726 (1011)
.+.+|+.|++++|.++. ++ .+..+++|+.|++++|++++.. .+..+++|++|++++|+++ .+|. +. .+++|+.
T Consensus 44 ~L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i~-~l~~-l~-~l~~L~~ 116 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKVK-DLSS-LK-DLKKLKS 116 (210)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCC-CGGG-GT-TCTTCCE
T ss_pred HHCCCCEEECCCCCCCC-CH-HHHHCCCCCEEECCCCCCCCCC--CCCCCCCCCCCCCCCCCCC-CCCC-CC-CCCCCCC
T ss_conf 95484589782798887-44-4764899898769896025860--1135862120143333321-2221-21-2221112
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97115425545881236999886898227331334450122555571024899999998667755446799999778865
Q 001801 727 LNLRSNIFDGQFPTELCFLTSLQILDLGYNNLSGAIPKCISNLSAMVTVDYPLGDTHPGITDCSLYRSCLPRPRSFSDPI 806 (1011)
Q Consensus 727 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 (1011)
|++++|.+.. ...+..++.++.+++++|.+++. ..+..++.|
T Consensus 117 L~l~~~~~~~--~~~l~~l~~l~~l~~~~n~l~~~--~~~~~l~~L---------------------------------- 158 (210)
T d1h6ta2 117 LSLEHNGISD--INGLVHLPQLESLYLGNNKITDI--TVLSRLTKL---------------------------------- 158 (210)
T ss_dssp EECTTSCCCC--CGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTC----------------------------------
T ss_pred CCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCC----------------------------------
T ss_conf 2345653221--12201111122211222333454--310001332----------------------------------
Q ss_pred CCEEEEECCCCHHHHHHCCEEEEEECCCCCCEECCCHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 4218984175023421211267997447700002741000112376441257636222552125899987995758
Q 001801 807 EKAFLVMKGKELEYSTILYLVALIDLSKNNFSGEIPVEVTDLVALRSLNLSYNHFSGRIPDSIGAMKSIEVIDFSN 882 (1011)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~ 882 (1011)
+.+++++|++++. + .+.++++|+.|+|++|.++. +| .+..+++|+.|+|++
T Consensus 159 ---------------------~~l~l~~n~l~~i-~-~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 159 ---------------------DTLSLEDNQISDI-V-PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp ---------------------SEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred ---------------------CCCCCCCCCCCCC-C-CCCCCCCCCEEECCCCCCCC-CH-HHCCCCCCCEEECCC
T ss_conf ---------------------1001346430256-4-53678989999897998998-72-116999989997118
No 21
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.90 E-value=5.8e-24 Score=130.30 Aligned_cols=104 Identities=22% Similarity=0.209 Sum_probs=36.7
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC-CCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEEECC
Q ss_conf 87627973432499552477856578575782511-27812218999959986798242136735765069983997115
Q 001801 653 VLNLGNNNFTGNLPPSLGSLGSLTLLHLQKNSLSG-RIPESLSNCNRLVSLNMDGNQFSGDIPTWIGEKFSSMVILNLRS 731 (1011)
Q Consensus 653 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L~~ 731 (1011)
.++.++++++ .+|..+. ++++.|+|++|++++ ..+..|.++++|+.|++++|.+.+..+..+. .+++|+.|++++
T Consensus 12 ~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~-~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFE-GASHIQELQLGE 87 (192)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTT-TCTTCCEEECCS
T ss_pred EEEEECCCCC-CCCCCCC--CCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC-CCCCCCEEEECC
T ss_conf 9997089967-0298989--78788984898775530200257876272130136322121212221-122221010035
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 42554588123699988689822733133
Q 001801 732 NIFDGQFPTELCFLTSLQILDLGYNNLSG 760 (1011)
Q Consensus 732 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 760 (1011)
|+++...|..|.++++|+.|+|++|++++
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~ 116 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISC 116 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCE
T ss_pred CCCCCCCHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 53443497998079746552457745353
No 22
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.90 E-value=1.6e-23 Score=128.16 Aligned_cols=52 Identities=29% Similarity=0.475 Sum_probs=19.4
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 01123764412576362225521258999879957588365348835448998996
Q 001801 846 TDLVALRSLNLSYNHFSGRIPDSIGAMKSIEVIDFSNNQLSEEIPRSVSNLTFLNL 901 (1011)
Q Consensus 846 ~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~ 901 (1011)
..+++|+.|++++|.+++.. .++++++|+.|++++|+++. +| .+..+++|+.
T Consensus 147 ~~~~~L~~L~l~~n~l~~l~--~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~ 198 (199)
T d2omxa2 147 SGLTSLQQLNFSSNQVTDLK--PLANLTTLERLDISSNKVSD-IS-VLAKLTNLES 198 (199)
T ss_dssp TTCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSE
T ss_pred CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCEEECCCCCCCC-CC-CCCCCCCCCC
T ss_conf 32111111223455556770--11679989999787997998-81-0127899894
No 23
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.88 E-value=1.7e-21 Score=118.15 Aligned_cols=57 Identities=21% Similarity=0.297 Sum_probs=22.0
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 7888988978899899987722469999978637898788888432489999989958999
Q 001801 132 HFQHLNYLDLSGNSFGGGIPRFLGSMGKLKYLNLSGAGFKGMIPHQLGNLSKLQYLDLVEN 192 (1011)
Q Consensus 132 ~l~~L~~L~Ls~~~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~~p~~l~~l~~L~~L~Ls~n 192 (1011)
.+.++++|+++++.+.. + +.++.+++|++|++++|.+++..| ++++++|++|++++|
T Consensus 38 ~l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n 94 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNN 94 (199)
T ss_dssp HHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHCCCCEEECCCCCCCC-C-CCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCC
T ss_conf 94687899899999977-5-202137886757545655667640--167752231111222
No 24
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=5.2e-23 Score=125.62 Aligned_cols=254 Identities=15% Similarity=0.137 Sum_probs=0.0
Q ss_pred CCEEECCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCEEE
Q ss_conf 7634544555778888000027777652786114422356790122034586876279734324-995524778565785
Q 001801 601 LESIDLSNNAFSGSISPVLCNGMRGELQVLNLENNSFSGEIPDCWMNFLYLRVLNLGNNNFTGN-LPPSLGSLGSLTLLH 679 (1011)
Q Consensus 601 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~-~p~~l~~l~~L~~L~ 679 (1011)
++.++++++.+.......+.. .....+.+...... ..........+|++|++++|.+++. ++..+..+++|+.|+
T Consensus 2 W~~lDLs~~~l~~~~l~~l~~---~~~~~lrl~~~~~~-~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~ 77 (284)
T d2astb2 2 WQTLDLTGKNLHPDVTGRLLS---QGVIAFRCPRSFMD-QPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 77 (284)
T ss_dssp SSEEECTTCBCCHHHHHHHHH---TTCSEEECTTCEEC-SCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred CCEEECCCCCCCCHHHHHHHH---CCCEEEECCCCCCC-CCHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCC
T ss_conf 677978999788147999874---55427465233345-52244256787887889898457779999997487765145
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCC-CCCCCCCCHHHHHCCCCCCEEEECCCCC---CCCCCCCCCCCCCCCEEECCC
Q ss_conf 757825112781221899995998679-8242136735765069983997115425---545881236999886898227
Q 001801 680 LQKNSLSGRIPESLSNCNRLVSLNMDG-NQFSGDIPTWIGEKFSSMVILNLRSNIF---DGQFPTELCFLTSLQILDLGY 755 (1011)
Q Consensus 680 L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~ip~~~~~~l~~L~~L~L~~N~l---~~~~p~~l~~l~~L~~L~Ls~ 755 (1011)
+++|.++...+..+..+++|++|++++ +.++..--..+.+.+++|++|+++++.. .+.........+.|+.|++++
T Consensus 78 L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~ 157 (284)
T d2astb2 78 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 157 (284)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCC
T ss_conf 23467986789998518997571510013412355403657887435652245332333220001000111110122135
Q ss_pred CCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCEEEEEEC
Q ss_conf 3313---3445012255557102489999999866775544679999977886542189841750234212112679974
Q 001801 756 NNLS---GAIPKCISNLSAMVTVDYPLGDTHPGITDCSLYRSCLPRPRSFSDPIEKAFLVMKGKELEYSTILYLVALIDL 832 (1011)
Q Consensus 756 N~l~---g~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdL 832 (1011)
+... ..+.....+++.| +.||+
T Consensus 158 ~~~~i~~~~l~~l~~~~~~L-------------------------------------------------------~~L~L 182 (284)
T d2astb2 158 YRKNLQKSDLSTLVRRCPNL-------------------------------------------------------VHLDL 182 (284)
T ss_dssp CGGGSCHHHHHHHHHHCTTC-------------------------------------------------------SEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCC-------------------------------------------------------CCCCC
T ss_conf 54244444343423232221-------------------------------------------------------23553
Q ss_pred CC-CCCEECCCHHCCCCCCCCEEECCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 47-700002741000112376441257-6362225521258999879957588365348835448998996983367150
Q 001801 833 SK-NNFSGEIPVEVTDLVALRSLNLSY-NHFSGRIPDSIGAMKSIEVIDFSNNQLSEEIPRSVSNLTFLNLLNLSYNYLS 910 (1011)
Q Consensus 833 s~-N~l~g~ip~~l~~l~~L~~L~Ls~-N~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~ls~N~l~ 910 (1011)
++ ..+++.....+.++++|+.|++++ +.+++.....++++++|+.|+++++--.+.++.....++.|.. ..++++
T Consensus 183 ~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~~~d~~l~~l~~~lp~L~i---~~~~ls 259 (284)
T d2astb2 183 SDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQI---NCSHFT 259 (284)
T ss_dssp TTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTSSCTTCHHHHHHHSTTSEE---SCCCSC
T ss_pred CCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC---CCCCCC
T ss_conf 22347783033332135768779899999787378999726999898964488898999999976843661---686587
Q ss_pred CCCCCC
Q ss_conf 049998
Q 001801 911 GEIPTS 916 (1011)
Q Consensus 911 g~ip~~ 916 (1011)
...+..
T Consensus 260 ~~~~~~ 265 (284)
T d2astb2 260 TIARPT 265 (284)
T ss_dssp CTTCSS
T ss_pred CCCCCC
T ss_conf 777885
No 25
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.85 E-value=1.4e-21 Score=118.52 Aligned_cols=256 Identities=16% Similarity=0.100 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCC----CCCCCCCCCCCCEEECCCCCCCCCCCCC---------CCCCCCCCCEEECCC
Q ss_conf 772246999997863789878888----8432489999989958999876779998---------789999986876999
Q 001801 150 IPRFLGSMGKLKYLNLSGAGFKGM----IPHQLGNLSKLQYLDLVENSELYVDNLS---------WLPGLSLLQHLDLGG 216 (1011)
Q Consensus 150 ~p~~l~~l~~L~~L~Ls~n~~~~~----~p~~l~~l~~L~~L~Ls~n~~~~~~~~~---------~l~~l~~L~~L~L~~ 216 (1011)
+...+.....|+.|+|++|.+... +...+...++|+.++++++......... .+...++|++|++++
T Consensus 23 l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~ 102 (344)
T d2ca6a1 23 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 102 (344)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999638997889784983778999999999985899888888777543345421067879998875477756330000
Q ss_pred CCCCCC--CCHHHHHCCCCCCCEEECCCCCCCCCCCCCC-------------CCCCCCCEEECCCCCCC--CCHHHHHHH
Q ss_conf 789996--4367871299998899757997999999998-------------79998659988999999--970125753
Q 001801 217 VNLGKA--FDWSLAINSLSSLRVLRLSGCQLDHFHPPPI-------------VNISSISVLDLSSNQFD--QNSLVLSWV 279 (1011)
Q Consensus 217 ~~~~~~--~~~~~~l~~l~~L~~L~Ls~~~l~~~~~~~l-------------~~l~~L~~L~Ls~n~~~--~~~~~~~~l 279 (1011)
|.++.. ..+...+...++|++|++++|.+.......+ ...+.|+.+++++|.+. +...+...+
T Consensus 103 n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l 182 (344)
T d2ca6a1 103 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 182 (344)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHH
T ss_conf 13455433310111002343210000024666654311112122221100014676421110136501355433221111
Q ss_pred HCCCCCCEEECCCCCCCCC-----CCCCCCCCCCCCEEECCCCCCCCC----CCHHCCCCCCCCEEECCCCCCCCCHHHH
Q ss_conf 0999976999569988656-----740134889999996879989887----4311028999869982388788740068
Q 001801 280 FGLSNLVYLDLGSNDFQGS-----IPVGLQNLTSLRHLDLSYNDFNSS----IPNWLASFSNLVHISLRSNSLQGSITGF 350 (1011)
Q Consensus 280 ~~l~~L~~L~L~~n~l~~~-----~~~~l~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 350 (1011)
...+.|++|++++|.++.. +...+..+++|+.|++++|.++.. +...+..+++|++|++++|.+.+.....
T Consensus 183 ~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~ 262 (344)
T d2ca6a1 183 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 262 (344)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHH
T ss_conf 23332133543332222222320024332110121122233332222222234443323221111030047567156678
Q ss_pred HHHHHCCCCEEECCCCCCCCCCCHHCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCC
Q ss_conf 87423025478635675768876000178998899815866885135777420135467762642658710224
Q 001801 351 LANLSASIEVLDLSSQQLEGQIPRSFGRLCNLREISLSDVKMSQDISEILDIFSSCISDRLESWDMTGCKIFGH 424 (1011)
Q Consensus 351 l~~l~~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~l~~~ 424 (1011)
+...- .-...+.|++|++++|.+.......+...-....+.|+.+++++|.+...
T Consensus 263 l~~~l-------------------~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~ 317 (344)
T d2ca6a1 263 VVDAF-------------------SKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 317 (344)
T ss_dssp HHHHH-------------------HTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHHHH-------------------HHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC
T ss_conf 88776-------------------31568888989898986980899999999970389999897879808986
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.1e-18 Score=104.26 Aligned_cols=109 Identities=18% Similarity=0.183 Sum_probs=43.8
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCE
Q ss_conf 03458687627973432499552477856578575782511278122189999599867982421367357650699839
Q 001801 647 NFLYLRVLNLGNNNFTGNLPPSLGSLGSLTLLHLQKNSLSGRIPESLSNCNRLVSLNMDGNQFSGDIPTWIGEKFSSMVI 726 (1011)
Q Consensus 647 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~ 726 (1011)
+...+++|+|++|+++ .++..+..+++|+.|++++|.++.. +.+..+++|++|++++|++. .++..++..+++|+.
T Consensus 16 n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~-~l~~~~~~~l~~L~~ 91 (162)
T d1a9na_ 16 NAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTE 91 (162)
T ss_dssp CTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCE
T ss_pred CCCCCCEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCCCC--CCCCCCCCHHHHHCCCCCCC-CCCCCCCCCCCCCCC
T ss_conf 8574848978899788-6576200414599898979978764--77445761306431021345-777632233453443
Q ss_pred EEECCCCCCCCCC-CCCCCCCCCCEEECCCCCCC
Q ss_conf 9711542554588-12369998868982273313
Q 001801 727 LNLRSNIFDGQFP-TELCFLTSLQILDLGYNNLS 759 (1011)
Q Consensus 727 L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~ 759 (1011)
|++++|.+..... ..+..+++|+.+++++|+++
T Consensus 92 L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 92 LILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp EECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 4203000166542110013653206640799634
No 27
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.70 E-value=6.6e-19 Score=105.42 Aligned_cols=112 Identities=23% Similarity=0.260 Sum_probs=48.6
Q ss_pred HHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCC
Q ss_conf 01220345868762797343249955247785657857578251127812218999959986798242136735765069
Q 001801 643 DCWMNFLYLRVLNLGNNNFTGNLPPSLGSLGSLTLLHLQKNSLSGRIPESLSNCNRLVSLNMDGNQFSGDIPTWIGEKFS 722 (1011)
Q Consensus 643 ~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~ 722 (1011)
..+..+++|++|++++|+++ .++ .+..+++|+.|++++|.++ .+|.....+++|+.|++++|+++ .++ .+. .++
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~-~l~-~~~-~l~ 115 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-SLS-GIE-KLV 115 (198)
T ss_dssp HHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECC-CHH-HHH-HHH
T ss_pred HHHHCCCCCCEEECCCCCCC-CCC-CCCCCCCCCCHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC-CCC-CCC-CCC
T ss_conf 67762604615199446899-864-4247825357341353432-10000332212333333332222-222-222-222
Q ss_pred CCCEEEECCCCCCCCCC-CCCCCCCCCCEEECCCCCCCC
Q ss_conf 98399711542554588-123699988689822733133
Q 001801 723 SMVILNLRSNIFDGQFP-TELCFLTSLQILDLGYNNLSG 760 (1011)
Q Consensus 723 ~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~g 760 (1011)
+|+.|++++|.++.... ..+..+++|+.|++++|++..
T Consensus 116 ~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~ 154 (198)
T d1m9la_ 116 NLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp HSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred CCCCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCCCCCC
T ss_conf 341112341021255422123677763023427984346
No 28
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.69 E-value=1.3e-16 Score=94.08 Aligned_cols=12 Identities=33% Similarity=0.420 Sum_probs=3.7
Q ss_pred CCCCEEECCCCC
Q ss_conf 988689822733
Q 001801 746 TSLQILDLGYNN 757 (1011)
Q Consensus 746 ~~L~~L~Ls~N~ 757 (1011)
++|+.+++++|+
T Consensus 90 ~~L~~L~l~~N~ 101 (124)
T d1dcea3 90 PRLVLLNLQGNS 101 (124)
T ss_dssp TTCCEEECTTSG
T ss_pred CCCCEEECCCCC
T ss_conf 999999897996
No 29
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.65 E-value=3e-18 Score=102.18 Aligned_cols=58 Identities=24% Similarity=0.346 Sum_probs=24.0
Q ss_pred EEECCCCCCEECCCHHCCCCCCCCEEECCCCCCCCCCC-CCCCCCCCCCEEECCCCCCCCC
Q ss_conf 99744770000274100011237644125763622255-2125899987995758836534
Q 001801 829 LIDLSKNNFSGEIPVEVTDLVALRSLNLSYNHFSGRIP-DSIGAMKSIEVIDFSNNQLSEE 888 (1011)
Q Consensus 829 ~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip-~~l~~l~~L~~L~Ls~N~l~~~ 888 (1011)
.|++++|+++. + ..+..+++|+.|++++|.++.... ..+..+++|+.|++++|.+...
T Consensus 97 ~L~l~~N~i~~-l-~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 155 (198)
T d1m9la_ 97 ELWISYNQIAS-L-SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp EEECSEEECCC-H-HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHH
T ss_pred CCCCCCCCCCC-C-CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCCCCCCC
T ss_conf 33333322222-2-22222223411123410212554221236777630234279843467
No 30
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=8.9e-16 Score=90.02 Aligned_cols=84 Identities=20% Similarity=0.157 Sum_probs=45.2
Q ss_pred EEEECCCCC-CEECCCHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 799744770-0002741000112376441257636222552125899987995758836534883544899899698336
Q 001801 828 ALIDLSKNN-FSGEIPVEVTDLVALRSLNLSYNHFSGRIPDSIGAMKSIEVIDFSNNQLSEEIPRSVSNLTFLNLLNLSY 906 (1011)
Q Consensus 828 ~~LdLs~N~-l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~ls~ 906 (1011)
+.|++++|+ ++...+..|.++++|+.|++++|+++...|..|..+++|+.|+|++|+++...+..+..+ .|+.|++++
T Consensus 34 ~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~~-~l~~L~L~~ 112 (156)
T d2ifga3 34 TELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGL-SLQELVLSG 112 (156)
T ss_dssp SEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSC-CCCEEECCS
T ss_pred CEEECCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHCCC-CCCCCCCCC
T ss_conf 7431689866443692122566666721620212477420111245543333226787851574563353-212433579
Q ss_pred CCCCCC
Q ss_conf 715004
Q 001801 907 NYLSGE 912 (1011)
Q Consensus 907 N~l~g~ 912 (1011)
|++.+.
T Consensus 113 Np~~C~ 118 (156)
T d2ifga3 113 NPLHCS 118 (156)
T ss_dssp SCCCCC
T ss_pred CCCCCC
T ss_conf 863388
No 31
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=4.4e-16 Score=91.52 Aligned_cols=66 Identities=24% Similarity=0.220 Sum_probs=23.1
Q ss_pred HHCCCCCCEEECCCC-CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 220345868762797-343249955247785657857578251127812218999959986798242
Q 001801 645 WMNFLYLRVLNLGNN-NFTGNLPPSLGSLGSLTLLHLQKNSLSGRIPESLSNCNRLVSLNMDGNQFS 710 (1011)
Q Consensus 645 ~~~l~~L~~L~Ls~n-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 710 (1011)
+..+++|++|++++| .++...+..|.++++|+.|++++|+++...+..|..+++|++|+|++|+++
T Consensus 27 l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~ 93 (156)
T d2ifga3 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE 93 (156)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS
T ss_pred CCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCCCC
T ss_conf 2576565743168986644369212256666672162021247742011124554333322678785
No 32
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.95 E-value=1.6e-11 Score=69.17 Aligned_cols=15 Identities=40% Similarity=0.379 Sum_probs=5.6
Q ss_pred CCCCCEEECCCCCCC
Q ss_conf 345868762797343
Q 001801 648 FLYLRVLNLGNNNFT 662 (1011)
Q Consensus 648 l~~L~~L~Ls~n~l~ 662 (1011)
+++|++|++++|+++
T Consensus 64 ~~~L~~L~Ls~N~i~ 78 (162)
T d1koha1 64 IPELLSLNLSNNRLY 78 (162)
T ss_dssp CTTCCCCCCCSSCCC
T ss_pred CCCCCEEECCCCCCC
T ss_conf 878788637776666
No 33
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.55 E-value=1.6e-07 Score=49.47 Aligned_cols=113 Identities=8% Similarity=0.073 Sum_probs=0.0
Q ss_pred CCCCCCCEEECCC-CCCC--CCHHHHHHHHCCCCCCEEECCCCCCC----CCCCCCCCCCCCCCEEECCCCCCCC----C
Q ss_conf 7999865998899-9999--97012575309999769995699886----5674013488999999687998988----7
Q 001801 254 VNISSISVLDLSS-NQFD--QNSLVLSWVFGLSNLVYLDLGSNDFQ----GSIPVGLQNLTSLRHLDLSYNDFNS----S 322 (1011)
Q Consensus 254 ~~l~~L~~L~Ls~-n~~~--~~~~~~~~l~~l~~L~~L~L~~n~l~----~~~~~~l~~l~~L~~L~L~~n~l~~----~ 322 (1011)
.+.+.|+.|++++ +.+. +...+...+...+.|++|++++|.+. ..+...+...+.|++|++++|.++. .
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred HCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHCCHHHHHH
T ss_conf 28999819782799998989999999997637764540120156215679887531000234330033010214599999
Q ss_pred CCHHCCCCCCCCEEECCCCCCCCC-------HHHHHHHHHCCCCEEECCCCC
Q ss_conf 431102899986998238878874-------006887423025478635675
Q 001801 323 IPNWLASFSNLVHISLRSNSLQGS-------ITGFLANLSASIEVLDLSSQQ 367 (1011)
Q Consensus 323 ~~~~l~~l~~L~~L~L~~n~l~~~-------~~~~l~~l~~~L~~L~Ls~n~ 367 (1011)
+...+...+.|++|++++|..... +...+...+ +|+.|+++.+.
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~-sL~~l~l~~~~ 142 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENE-SLLRVGISFAS 142 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCS-SCCEEECCCCC
T ss_pred HHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCC-CCCEEECCCCC
T ss_conf 9999984893898778877688865799999999997299-85386486888
No 34
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=98.16 E-value=4.2e-07 Score=47.36 Aligned_cols=118 Identities=16% Similarity=0.131 Sum_probs=0.0
Q ss_pred HHHHHCCCCCCCEEECCC-CCCCCCCC----CCCCCCCCCCEEECCCCCCC--CCHHHHHHHHCCCCCCEEECCCCCCCC
Q ss_conf 678712999988997579-97999999----99879998659988999999--970125753099997699956998865
Q 001801 225 WSLAINSLSSLRVLRLSG-CQLDHFHP----PPIVNISSISVLDLSSNQFD--QNSLVLSWVFGLSNLVYLDLGSNDFQG 297 (1011)
Q Consensus 225 ~~~~l~~l~~L~~L~Ls~-~~l~~~~~----~~l~~l~~L~~L~Ls~n~~~--~~~~~~~~l~~l~~L~~L~L~~n~l~~ 297 (1011)
+.....+.+.|++|++++ +.++.... ..+...+.|++|++++|.+. +...+...+...+.++.+++++|.+..
T Consensus 9 l~~~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~ 88 (166)
T d1io0a_ 9 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 88 (166)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCC
T ss_conf 99999559998688768999989899999998884198257430158961177899999877521221012102543220
Q ss_pred C----CCCCCCCCCCCCE--EECCCCCCCC----CCCHHCCCCCCCCEEECCCCC
Q ss_conf 6----7401348899999--9687998988----743110289998699823887
Q 001801 298 S----IPVGLQNLTSLRH--LDLSYNDFNS----SIPNWLASFSNLVHISLRSNS 342 (1011)
Q Consensus 298 ~----~~~~l~~l~~L~~--L~L~~n~l~~----~~~~~l~~l~~L~~L~L~~n~ 342 (1011)
. +...+...+.|+. |++++|.+.. .+...+...+.|+.|++..+.
T Consensus 89 ~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 89 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCC
T ss_conf 1478899999848652477321677867679999999999849984788581898
Done!